BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047067
(566 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/567 (72%), Positives = 479/567 (84%), Gaps = 1/567 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+CTHL KL E +I+HA +L S F++D+ MQNT+LN YAKCG L ARKLFDEM +D+VT
Sbjct: 24 RCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVT 83
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
WTALI+GYSQ+D+P++A++L +MLR+GLKPNQFTL+S+LKA SG G+TD GRQ+H
Sbjct: 84 WTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGL 143
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
CL+YGYD NVYV ++LDMYAR +++A +F + SKNEVSWNALIAG+ARK +G+KA
Sbjct: 144 CLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKA 203
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
FS MLRE +PTHF+YSSV A AS GSLEQGKWVHA +IK G +LVAFVGNTL+DM
Sbjct: 204 FCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDM 263
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAKSGSIEDA+KVF+RL KRDVVSWNSMLTG +QHGLGK ++ FE+MLR IAPN +TF
Sbjct: 264 YAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITF 323
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
LCVLTACSHAGLLDEG+ YF +MKK+ VEP+ +HYVT VDLLGRAG LDRA++FI EMPI
Sbjct: 324 LCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPI 383
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+PTAAVWGALLGACRMHKN+ELG YAAE IFELD H G H+LL NIYA AGR NDAA+
Sbjct: 384 KPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKV 443
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RKMMKESGVKKEPACSWVE +N VH+FVA+DDAHPQR IH W +IS+KIK+IGYVPDS
Sbjct: 444 RKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDS 503
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
SHVL DQQEREAKLQ HSEKLALAFAL++TPPGSTI IKKNIR+CGDCHSAFKF SK+
Sbjct: 504 SHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKL 563
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
VEREIIVRDTNRFHHF DG CSC DYW
Sbjct: 564 VEREIIVRDTNRFHHFCDGACSCEDYW 590
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/566 (70%), Positives = 480/566 (84%), Gaps = 1/566 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KCT+L+KLK+ R +HAHI S F++D+ + N ILN YAKCG L+EA+ LFD+MP KDMV+
Sbjct: 114 KCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVS 173
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT LISGYSQ+ Q A+ LF +ML LG +PN+FTLSS+LKASG G +D GRQ+HAF
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHH-GRQLHAFS 232
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LKYGYD NV+VGSSLLDMYAR+ M +A +F +L +KN VSWNALIAGHARK EGE +
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F +MLR+GFEPTHF+YSSVFTA AS+GSLEQGKWVHAHVIKSGGQ +A++GNTL+DMY
Sbjct: 293 RLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMY 352
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI+DA+KVF RL+K+D+VSWNS+++G AQHGLG ++ FE+ML+ + PN++TFL
Sbjct: 353 AKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFL 412
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH+GLLDEGQ YF LMKKH +E + AH+VT VDLLGRAG L+ A KFI EMPI+
Sbjct: 413 SVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK 472
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTAAVWGALLG+CRMHKN++LG YAAE+IFELDPHDSGPH+LL+NIYASAGRL+DAA+ R
Sbjct: 473 PTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVR 532
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMMKESGVKKEPACSWVE +N VH+FVANDD+HP R I + W +IS KIK+IGYVPD+S
Sbjct: 533 KMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 592
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HVL + +QQ+RE KLQ HSEKLALAFA++ TPPG TI IKKNIR+CGDCHSAFKFAS+V+
Sbjct: 593 HVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVL 652
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDTNRFHHF G CSC DYW
Sbjct: 653 GREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 46/279 (16%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP YS + L+QG+ +HAH+ S + + N +++MYAK GS+E+A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F+++ +D+VSW +++G +Q G + F KML G PN+ T +L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA-------------------- 350
G+ A K+G + + +D+ R + A
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 351 ---------------LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
L+ +R+ EPT + ++ AC ++E G + + +
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQ-GFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK---- 335
Query: 396 DSGPHI-----LLANIYASAGRLNDAARA-RKMMKESGV 428
G I L ++YA +G + DA + R+++K+ V
Sbjct: 336 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIV 374
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/566 (70%), Positives = 478/566 (84%), Gaps = 2/566 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KCT+L+KLK+ R +HAHI S F++D+ + N ILN YAKCG L+EA+ LFD+MP KDMV+
Sbjct: 114 KCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVS 173
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT LISGYSQ+ Q A+ LF +ML LG +PN+FTLSS+LKASG G +D GRQ+HAF
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHH-GRQLHAFS 232
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LKYGYD NV+VGSSLLDMYAR+ M +A +F +L +KN VSWNALIAGHARK EGE +
Sbjct: 233 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 292
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F +MLR+GFEPTHF+YSSV A AS+GSLEQGKWVHAHVIKSGGQ +A++GNTL+DMY
Sbjct: 293 RLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMY 351
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI+DA+KVF RL+K+D+VSWNS+++G AQHGLG ++ FE+ML+ + PN++TFL
Sbjct: 352 AKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFL 411
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH+GLLDEGQ YF LMKKH +E + AH+VT VDLLGRAG L+ A KFI EMPI+
Sbjct: 412 SVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK 471
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTAAVWGALLGACRMHKN++LG YAAE+IFELDPHDSGPH+LL+NIYASAGRL+DAA+ R
Sbjct: 472 PTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVR 531
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMMKESGVKKEPACSWVE +N VH+FVANDD+HP R I + W +IS KIK+IGYVPD+S
Sbjct: 532 KMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 591
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HVL + +QQ+RE KLQ HSEKLALAFA++ TPPG TI IKKNIR+CGDCHSAFKFAS+V+
Sbjct: 592 HVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVL 651
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDTNRFHHF G CSC DYW
Sbjct: 652 GREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP YS + L+QG+ +HAH+ S + + N +++MYAK GS+E+A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F+++ +D+VSW +++G +Q G + F KML G PN+ T +L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ A K+G + + +D+ R + R K I W AL+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM-REAKVIFNSLAAKNVVSWNALI 279
Query: 371 GA 372
Sbjct: 280 AG 281
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/559 (71%), Positives = 472/559 (84%), Gaps = 2/559 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
+CT L K+++ RIVHAH++ S F N + +QN I+N YAKCGCLD+AR++FDEMP KDMV
Sbjct: 96 ECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMV 155
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
TWTALI+G+SQN++P +A++LF QMLRLG +PN FTLSS+LKASG+ D G Q+HAF
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDP-GTQLHAF 214
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
CLKYGY +VYVGS+L+DMYAR MD A F + +K+EVSWNALI+GHARK EGE A
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L +M R+ F+PTHF+YSSV +A AS G+LEQGKWVHAH+IKSG +L+AF+GNTL+DM
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK+GSI+DA++VF+RL+K DVVSWN+MLTGCAQHGLGK T+ FE+MLR GI PN+++F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
LCVLTACSH+GLLDEG YF LMKK+ VEP+ HYVTFVDLLGR GLLDRA +FIREMPI
Sbjct: 395 LCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPI 454
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EPTAAVWGALLGACRMHKN+ELG YAAER FELDPHDSGP +LL+NIYASAGR D A+
Sbjct: 455 EPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKV 514
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RKMMKESGVKK+PACSWVE +NAVH+FVAND+ HP+ I KW EIS KIK+IGYVPD+
Sbjct: 515 RKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDT 574
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
SHVL + DQQERE KLQ HSEKLALAFAL++TP GS I IKKNIRVCGDCH+A KF SKV
Sbjct: 575 SHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKV 634
Query: 540 VEREIIVRDTNRFHHFRDG 558
V+REIIVRDTNRFH FRDG
Sbjct: 635 VDREIIVRDTNRFHRFRDG 653
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 13/264 (4%)
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS---GGQLV 229
+S+G L + R P + YS + G +EQG+ VHAH++ S LV
Sbjct: 65 QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
+ N +V+MYAK G ++DA ++F+ + +D+V+W +++ G +Q+ + + F +MLR
Sbjct: 125 --LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G PN T +L A LD G A K+G + VD+ R G +D
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIY- 407
A MP + + W AL+ H G +A ++++ + P H +++
Sbjct: 243 AQLAFDGMPTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLS 298
Query: 408 --ASAGRLNDAARARKMMKESGVK 429
AS G L M +SG+K
Sbjct: 299 ACASIGALEQGKWVHAHMIKSGLK 322
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/566 (69%), Positives = 465/566 (82%), Gaps = 1/566 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KCT K L + RIVHAHIL S F++DI M NT+LN YAKCG L+EARK+F++MP +D VT
Sbjct: 69 KCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVT 128
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT LISGYSQ+D+P +A++ F+QMLR G PN+FTLSSV+KA+ A G Q+H FC
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA-ERRGCCGHQLHGFC 187
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+D NV+VGS+LLD+Y R+ MDDA +F ALES+N+VSWNALIAGHAR+S EKAL
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F MLR+GF P+HFSY+S+F A +STG LEQGKWVHA++IKSG +LVAF GNTL+DMY
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI DA K+F+RL KRDVVSWNS+LT AQHG GK V WFE+M R GI PN+++FL
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH+GLLDEG Y+ LMKK G+ PE HYVT VDLLGRAG L+RAL+FI EMPIE
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTAA+W ALL ACRMHKN ELGAYAAE +FELDP D GPH++L NIYAS GR NDAAR R
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVR 487
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MKESGVKKEPACSWVE +NA+HMFVAND+ HPQR I +KW E+ KIK++GYVPD+S
Sbjct: 488 KKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HV+ + DQQERE LQ HSEK+ALAFAL++TPPGSTIHIKKNIRVCGDCH+A K ASKVV
Sbjct: 548 HVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVV 607
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDTNRFHHF+DG CSC DYW
Sbjct: 608 GREIIVRDTNRFHHFKDGNCSCKDYW 633
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/566 (69%), Positives = 461/566 (81%), Gaps = 1/566 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KCT K L + RIVH H++ S F++D+ M NT+LN YAKCG L+EARK+FD+MP +D VT
Sbjct: 60 KCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVT 119
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT LISGYSQ+D+P +A++LF+QMLR G PN+FTLSSV+KA+ A G Q+H FC
Sbjct: 120 WTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAA-ERRGCCGHQLHGFC 178
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+D NV+VGS+LLD+Y R+ MDDA +F ALES+N+VSWNALIAGHAR+ EKAL
Sbjct: 179 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKAL 238
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F MLREGF P+HFSY+S+F A +STG LEQGKWVHA++IKSG +LVAF GNTL+DMY
Sbjct: 239 ELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 298
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI DA K+F+RL KRDVVSWNS+LT AQHG G V WFE+M R GI PN+++FL
Sbjct: 299 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFL 358
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH+GLLDEG Y+ LMKK G+ E HYVT VDLLGRAG L+RAL+FI EMPIE
Sbjct: 359 SVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIE 418
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTAA+W ALL ACRMHKN ELGAYAAE +FELDP D GPH++L NIYAS GR NDAAR R
Sbjct: 419 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVR 478
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MKESGVKKEPACSWVE +NA+HMFVAND+ HPQR I +KW E+ KIK++GYVPD+S
Sbjct: 479 KKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 538
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HV+ + DQQERE LQ HSEK+ALAFAL++TPPGSTIHIKKNIRVCGDCHSA K ASK V
Sbjct: 539 HVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAV 598
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDTNRFHHF+DG CSC DYW
Sbjct: 599 GREIIVRDTNRFHHFKDGACSCKDYW 624
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/558 (69%), Positives = 458/558 (82%), Gaps = 1/558 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KCT K L + RIVHAHIL S F++DI M NT+LN YAKCG L+EARK+F++MP +D VT
Sbjct: 69 KCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVT 128
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT LISGYSQ+D+P +A++ F+QMLR G PN+FTLSSV+KA+ A G Q+H FC
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA-ERRGCCGHQLHGFC 187
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+D NV+VGS+LLD+Y R+ MDDA +F ALES+N+VSWNALIAGHAR+S EKAL
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F MLR+GF P+HFSY+S+F A +STG LEQGKWVHA++IKSG +LVAF GNTL+DMY
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI DA K+F+RL KRDVVSWNS+LT AQHG GK V WFE+M R GI PN+++FL
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH+GLLDEG Y+ LMKK G+ PE HYVT VDLLGRAG L+RAL+FI EMPIE
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTAA+W ALL ACRMHKN ELGAYAAE +FELDP D GPH++L NIYAS GR NDAAR R
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVR 487
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MKESGVKKEPACSWVE +NA+HMFVAND+ HPQR I +KW E+ KIK++GYVPD+S
Sbjct: 488 KKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HV+ + DQQERE LQ HSEK+ALAFAL++TPPGSTIHIKKNIRVCGDCH+A K ASKVV
Sbjct: 548 HVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVV 607
Query: 541 EREIIVRDTNRFHHFRDG 558
REIIVRDTNRFHHF+D
Sbjct: 608 GREIIVRDTNRFHHFKDA 625
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/542 (71%), Positives = 457/542 (84%), Gaps = 2/542 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
+CT L K+++ RIVHAH++ S F N + +QN I+N YAKCGCLD+AR++FDEMP KDMV
Sbjct: 96 ECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMV 155
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
TWTALI+G+SQN++P +A++LF QMLRLGL+PN FTLSS+LKASG+ D G Q+HAF
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDP-GTQLHAF 214
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
CLKYGY +VYVGS+L+DMYAR MD A F + +K+EVSWNALI+GHARK EGE A
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHA 274
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L +M R+ F+PTHF+YSSVF+A AS G+LEQGKWVHAH+IKSG +L+AF+GNTL+DM
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK+GSI+DA++VF+RL+K DVVSWN+MLTGCAQHGLGK T+ FE+MLR GI PN+++F
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISF 394
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
LCVLTACSH+GLLDEG YF LMKK+ VEP+ HYVTFVDLLGR GLLDRA +FIREMPI
Sbjct: 395 LCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPI 454
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EPTAAVWGALLGACRMHKN+ELG YAAER FELDPHDSGP +LL+NIYASAGR D A+
Sbjct: 455 EPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKV 514
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RKMMKESGVKK+PACSWVE +NAVH+FVAND+ HPQ I KW EIS KIK+IGYVPD+
Sbjct: 515 RKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDT 574
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
SHVL + DQQERE KLQ HSEKLALAFAL++TP GS I IKKNIRVCGDCH+A KF SK+
Sbjct: 575 SHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634
Query: 540 VE 541
E
Sbjct: 635 YE 636
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 13/264 (4%)
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS---GGQLV 229
+S+G L + R P + YS + G +EQG+ VHAH++ S LV
Sbjct: 65 QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
+ N +V+MYAK G ++DA ++F+ + +D+V+W +++ G +Q+ + + F +MLR
Sbjct: 125 --LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ PN T +L A LD G A K+G + VD+ R G +D
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIY- 407
A MP + + W AL+ H G +A ++++ + P H ++++
Sbjct: 243 AQLAFDGMPTKSEVS-WNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFS 298
Query: 408 --ASAGRLNDAARARKMMKESGVK 429
AS G L M +SG+K
Sbjct: 299 ACASIGALEQGKWVHAHMIKSGLK 322
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/566 (65%), Positives = 458/566 (80%), Gaps = 1/566 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+CT L KLKE ++VH H+L S FK+D+ +QN++L YA+CG L+ AR+LFDEMP +DMV+
Sbjct: 83 RCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVS 142
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT++I+GY+QND+ +A++LF +ML G +PN+FTLSS++K G A+ + GRQ+HA C
Sbjct: 143 WTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN-CGRQIHACC 201
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
KYG NV+VGSSL+DMYAR + +A +F L KNEVSWNALIAG+ARK EGE+AL
Sbjct: 202 WKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEAL 261
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M REG+ PT F+YS++ ++ +S G LEQGKW+HAH++KS +LV +VGNTL+ MY
Sbjct: 262 ALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMY 321
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI DAEKVF++L+K DVVS NSML G AQHGLGK + F++M+R GI PN +TFL
Sbjct: 322 AKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFL 381
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSHA LLDEG+ YF LM+K+ +EP+ +HY T VDLLGRAGLLD+A FI EMPIE
Sbjct: 382 SVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIE 441
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT A+WGALLGA +MHKN E+GAYAA+R+FELDP G H LLANIYASAGR D A+ R
Sbjct: 442 PTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVR 501
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SGVKKEPACSWVE +N+VH+FVAND AHPQ+ IHK W ++++KIK+IGYVPD+S
Sbjct: 502 KIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTS 561
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HVL + DQQE+E LQ HSEKLAL+FAL++TPPGSTI I KNIRVCGDCHSA K+ S VV
Sbjct: 562 HVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVV 621
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REIIVRDTNRFHHF DGFCSCGDYW
Sbjct: 622 KREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP Y+++ G L++GK VH HV+ S + + N+L+ MYA+ GS+E A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
++F+ + RD+VSW SM+TG AQ+ + F +ML +G PN+ T ++ C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G+ A K+G + VD+ R G L A+ ++ + + W AL+
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS-WNALI 248
Query: 371 GA 372
Sbjct: 249 AG 250
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/565 (61%), Positives = 445/565 (78%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L +AR +HAH+ GS F + + N++++ Y KCG + +AR++FD MP +DM +W
Sbjct: 74 CARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSW 133
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QND P+ A+ L MLR KPN FT +S+LKA+GA A+ G Q+HA +
Sbjct: 134 TSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS-GIGEQIHALTV 192
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KY + +VYVGS+LLDMYAR +MD A +F LESKN VSWNALIAG ARK +GE L
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM R GFE THF+YSSVF+A+A G+LEQGKWVHAH+IKSG +L AFVGNT++DMYA
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF+R+ K+DVV+WNSMLT AQ+GLG+ V FE+M + G+ NQ+TFL
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTACSH GL+ EG+ YF +MK++ +EPE HYVT VDLLGRAGLL+ AL FI +MP++P
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 432
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALLG+CRMHKN ++G +AA+ +FELDP D+GP +LL NIYAS G+ + AAR RK
Sbjct: 433 TAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRK 492
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWVE +N+VHMFVANDD HP+ I+KKW EIS +I++ GYVP++ +
Sbjct: 493 MMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDY 552
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + D+QER+AKLQ HSEK+ALAFALI+ P G+TI I KNIR+CGDCHSAF++ SKV +
Sbjct: 553 VLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFK 612
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRDTNRFHHF G CSCGDYW
Sbjct: 613 REIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y S+ TA A SL+ + +HAH+ S F+ N+L+ +Y K G++ DA +VF+ +
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
RD+ SW S++ G AQ+ + + MLR PN TF +L A + G+
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
AL K+ + +D+ R G +D A+ ++ W AL+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALI 238
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/571 (62%), Positives = 449/571 (78%), Gaps = 7/571 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+CT L KLK+ ++VH H++ S F+ND+ ++N+IL YAKCG L+ AR++FDEM VKD+VT
Sbjct: 100 RCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVT 159
Query: 61 WTALISGYSQN---DQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQV 116
WT++I+GYSQ+ A++LF +M+R GL+PN+F LSS++K G G+ D G+Q+
Sbjct: 160 WTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD--GKQI 217
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H C KYG+ NV+VGSSL+DMYAR ++ ++ +F LESKNEVSWNALI+G ARK EG
Sbjct: 218 HGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEG 277
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+AL F +M REGF T F+YS++ + ++TGSLEQGKW+HAH++KSG +LV +VGNTL
Sbjct: 278 EEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTL 337
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPN 295
+ MYAKSG+I DA+KVF+RL+K DVVS NSML G AQHGLGK V FE+M L I PN
Sbjct: 338 LHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPN 397
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+TFL VLTACSHAGLLDEG YF LMKK+G+EP+ +HY T VDL GRAGLLD+A FI
Sbjct: 398 DITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIE 457
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
EMPIEP A +WGALLGA +MHKN E+GAYAA+++ ELDP G H LL+NIYASAG+ D
Sbjct: 458 EMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKD 517
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A+ RK MK+SG+KKEPACSWVE +N+VH+F AND +HPQ+ +++ W +++KIK+IGY
Sbjct: 518 VAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGY 577
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VPD+SHV + DQQE+E LQ HSEKLALAFAL++T PGS I I KNIRVCGDCHSA K+
Sbjct: 578 VPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKY 637
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S VV+REIIVRDTNRFHHFRDG CSC DYW
Sbjct: 638 VSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP Y+ + G L+QGK VH H++ S + + N+++ MYAK GS+E A
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR---WFEKMLRNGIAPNQVTFLCVLTACS 307
+VF+ + +DVV+W SM+TG +Q G + F +M+R+G+ PN+ ++ C
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
G +G+ K+G + + VD+ R G L + E+ + + W
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVS-WN 265
Query: 368 ALLGA 372
AL+
Sbjct: 266 ALISG 270
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/564 (61%), Positives = 444/564 (78%), Gaps = 1/564 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L +AR +HAH+ GS F + + N++++ Y KCG + +AR++FD MP +DM +W
Sbjct: 74 CARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSW 133
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QND P+ A+ L MLR KPN FT +S+LKA+GA A+ G Q+HA +
Sbjct: 134 TSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSG-IGEQIHALTV 192
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KY + +VYVGS+LLDMYAR +MD A +F LESKN VSWNALIAG ARK +GE L
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM R GFE THF+YSSVF+A+A G+LEQGKWVHAH+IKSG +L AFVGNT++DMYA
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF+R+ K+DVV+WNSMLT AQ+GLG+ V FE+M + G+ NQ+TFL
Sbjct: 313 KSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 372
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTACSH GL+ EG+ YF +MK++ +EPE HYVT VDLLGRAGLL+ AL FI +MP++P
Sbjct: 373 ILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKP 432
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALLG+CRMHKN ++G +AA+ +FELDP D+GP +LL NIYAS G+ + AAR RK
Sbjct: 433 TAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRK 492
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWVE +N+VHMFVANDD HP+ I+KKW EIS +I++ GYVP++ +
Sbjct: 493 MMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDY 552
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + D+QER+AKLQ HSEK+ALAFALI+ P G+TI I KNIR+CGDCHSAF++ SKV +
Sbjct: 553 VLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFK 612
Query: 542 REIIVRDTNRFHHFRDGFCSCGDY 565
REI+VRDTNRFHHF G CSCGDY
Sbjct: 613 REIVVRDTNRFHHFSSGSCSCGDY 636
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y S+ TA A SL+ + +HAH+ S F+ N+L+ +Y K G++ DA +VF+ +
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
RD+ SW S++ G AQ+ + + MLR PN TF +L A + G+
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
AL K+ + +D+ R G +D A+ ++ W AL+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAG 240
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/565 (63%), Positives = 439/565 (77%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L++AR +HAH+ S F D + N++++ Y KC + +AR +FD+M KDMV+W
Sbjct: 61 CAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSW 120
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QND P AI L ML+ KPN FT +S+LKA+GA A D GRQ+HA +
Sbjct: 121 TSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA-DSGTGRQIHALAV 179
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +VYVGS+LLDMYAR +MD A +F L+SKN VSWNALI+G ARK +GE AL
Sbjct: 180 KCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALM 239
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
TF+EMLR GFE THF+YSSVF+++A G+LEQGKWVHAHVIKS +L AFVGNTL+DMYA
Sbjct: 240 TFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYA 299
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF+R+ +D+V+WNSMLT AQ+GLGK V FE+M ++G+ NQ+TFLC
Sbjct: 300 KSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLC 359
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTACSH GL+ EG+ YF +MK++ +EPE HYVT V LLGRAGLL+ AL FI +MP+EP
Sbjct: 360 ILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEP 419
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALL ACRMHKN ++G +AA+ +FELDP DSGP +LL NIYAS G+ + AAR R
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRM 479
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWVE +N+VHMFVANDD HPQ I+K W EIS+KI++ GYVPD +
Sbjct: 480 MMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDY 539
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + D QE+EA LQ HSEKLALAFALI P G+TI I KNIR+CGDCHSAFK+ SKV
Sbjct: 540 VLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFG 599
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRDTNRFHHF G CSCGDYW
Sbjct: 600 REIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT Y S TA A + +LE + +HAH+ S AF+ N+L+ MY K S+ DA V
Sbjct: 49 PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+++ ++D+VSW S++ G AQ+ + + ML+ PN TF +L A
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ AL K G + +D+ R G +D A ++ W AL+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALI 225
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/565 (63%), Positives = 439/565 (77%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L++AR VHAH+ S F D + N++++ Y KCG + EARK+FDEM KDMV+W
Sbjct: 61 CAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSW 120
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QND PE AI L ML+ KPN FT +S+LKA+GA A D GRQ+HA +
Sbjct: 121 TSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA-DSGIGRQIHALAV 179
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +VYVGS+LLDMYAR MD A +F L+SKN VSWNALI+G ARK +GE AL
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
TF+EMLR GFE THF+YSSVF+++A G+LEQGKWVHAH+IKS ++ AF GNTL+DMYA
Sbjct: 240 TFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYA 299
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF+R+ +D+V+WN+MLT AQ+GLGK V FE+M ++GI NQVTFLC
Sbjct: 300 KSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLC 359
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTACSH GL+ EG+ YF +MK++ +EPE H+VT V LLGRAGLL+ AL FI +MPIEP
Sbjct: 360 ILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEP 419
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALL ACRMHKN ++G +AA+ +FELDP DSGP +LL NIYAS G+ + AAR R+
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRR 479
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+MK +GVKKEPACSWVE +N+VHMFVANDD HP+ I+K W +IS+KI++ GYVPD +
Sbjct: 480 IMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDY 539
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL D QEREA LQ HSEKLALAFALI P G+TI I KNIR+CGDCHSAFK+ SKV
Sbjct: 540 VLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFG 599
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRDTNRFHHF +G CSC DYW
Sbjct: 600 REIVVRDTNRFHHFSNGSCSCADYW 624
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT Y + TA A + +LE + VHAH+ S AF+ N+L+ +Y K GS+ +A KV
Sbjct: 49 PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKV 108
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ + ++D+VSW S++ G AQ+ + + + ML+ PN TF +L A
Sbjct: 109 FDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADS 168
Query: 313 DEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ AL K + E YV +D+ R G++D A ++ W AL+
Sbjct: 169 GIGRQIHALAVK--CDWHEDVYVGSALLDMYARCGMMDMATAVFDKLD-SKNGVSWNALI 225
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/565 (61%), Positives = 438/565 (77%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L AR +HAH+ S D + N++++ Y KCG + +AR +FD+MP +D+V+W
Sbjct: 70 CAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSW 129
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI+GY+QN P AI L MLR +PN FT +S+LKA+GA G Q+HA +
Sbjct: 130 TYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGA-CGGCSIGEQMHALAV 188
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KY +D +VYVGS+LLDMYAR +QMD A +F L SKNEVSWNALIAG ARK++GE L
Sbjct: 189 KYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLM 248
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM R GF THF+YSS+F+A A G+LEQG+WVHAH+IKSG +L AFVGNT++ MYA
Sbjct: 249 KFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYA 308
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF+R+ KRD+V+WN+MLT AQ+GLGK V FE++ + GI NQ+TFL
Sbjct: 309 KSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLS 368
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VLTACSH GL+ EG+ YF +MK + V+PE HYV+FVDLLGRAGLL AL F+ +MP+EP
Sbjct: 369 VLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEP 428
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALLGACRMHKN ++G YAA+ +FELDP D+GP +LL NIYAS G+ NDAAR RK
Sbjct: 429 TAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRK 488
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWV+ +N+VHMFVA+DD HP+ I++ W EI+ +IK+ GYVP+++H
Sbjct: 489 MMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAH 548
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + ++QERE KL+ HSEK+ALAFALI+ P G++I I KNIR+CGDCHSAFK+ SKV +
Sbjct: 549 VLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFK 608
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRDTNRFHHF +G CSCGDYW
Sbjct: 609 REIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 185 EMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
++L G PT Y S+ A A +L + +HAH+ +S AF+ N+L+ MY K
Sbjct: 49 DLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKC 108
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G++ DA VF+++ RDVVSW ++ G AQ+ + + MLR PN TF +L
Sbjct: 109 GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLL 168
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
A G G+ AL K+ + + +D+ R +D A+ + +
Sbjct: 169 KATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNE 227
Query: 364 AVWGALLG 371
W AL+
Sbjct: 228 VSWNALIA 235
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/565 (62%), Positives = 436/565 (77%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L +AR +H H+ S F+ D + N++++ Y KCG + EA K+FD+M KDMV+W
Sbjct: 61 CAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSW 120
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QND P AI L ML+ KPN FT +S+LKA+GA A D G Q+HA +
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA-DSGIGGQIHALAV 179
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +VYVGS+LLDMYAR +MD A +F L+SKN VSWNALI+G ARK +GE AL
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM R GFE THF+YSS+F+ LA G+LEQGKWVHAH++KS +L AFVGNT++DMYA
Sbjct: 240 VFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYA 299
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF R+L +D+V+WNSMLT AQ+GLGK V FE+M ++GI NQ+TFLC
Sbjct: 300 KSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLC 359
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTACSH GL+ EG+ YF ++K++ +EPE HYVT VDLLGRAGLL+ AL FI +MP+EP
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALL ACRMHKN ++G +AA+ +F+LDP DSGP +LL NIYAS G + AAR RK
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRK 479
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWVE N+VHMFVANDD HP+ I+K W EIS KI++ GYVPD +
Sbjct: 480 MMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDY 539
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + D+QEREA LQ HSEK+ALAFALI P G+TI I KNIR+CGDCHSAFK+ SKV E
Sbjct: 540 VLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFE 599
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRDTNRFHHF +G CSCGDYW
Sbjct: 600 REIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT Y + TA A + +L+ + +H H+ S + AF+ N+L+ +Y K GS+ +A KV
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+++ K+D+VSW S++ G AQ+ + + ML+ PN TF +L A
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168
Query: 313 DEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G AL K + E YV +D+ R G +D A ++ W AL+
Sbjct: 169 GIGGQIHALAVK--CDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALI 225
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/565 (60%), Positives = 432/565 (76%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L AR +H+H+ S D + N++++ Y KCG + +AR +FD +P +D+V+W
Sbjct: 72 CAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSW 131
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI+GY+QND P A+ L MLR +P+ FT +S LKA+GA G Q+HA +
Sbjct: 132 TYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGA-CGGRGIGEQMHALAV 190
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KY D +VYVGS+LLDMYAR QMD A +F L+SKNEVSWNALIAG ARK +GE L
Sbjct: 191 KYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLM 250
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM R GF THF+YSSVF+ALA G+LEQG+WVHAH+IKSG +L AFV NT++ MYA
Sbjct: 251 KFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYA 310
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF+R+ +RD+V+WN+MLT AQ+GLGK V FE++ + GI NQ+TFL
Sbjct: 311 KSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLS 370
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VLTACSH GL+ EG+ YF +MK + VEPE HYV+FVDLLGRAGLL AL F+ +MP+EP
Sbjct: 371 VLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEP 430
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALLGACRMHKN ++G YAA+ +FELDP D+GP +LL NIYAS G+ +DAAR RK
Sbjct: 431 TAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRK 490
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWVE +N+VHMFVA+D HP+ I++ W E++ +IK+ GYVP++ +
Sbjct: 491 MMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDY 550
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + +QERE KLQ HSEK+ALAFALI+ P G+TI I KNIR+CGDCHSAF++ S+V +
Sbjct: 551 VLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFK 610
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRDTNRFHHF +G CSCGDYW
Sbjct: 611 REIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%)
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
LR +L PT Y S+ TA A + +L + +H+H+ +S F+ N+L+
Sbjct: 46 GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K G++ DA VF+ + RDVVSW ++TG AQ+ + + MLR P+ T
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
F L A G G+ AL K+ ++ + +D+ R +D A++
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIR 219
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/530 (63%), Positives = 420/530 (79%), Gaps = 1/530 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y KCG + +AR +FD+MP +D+V+WT LI+GY+QN P AI L MLR +PN FT
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+S+LKA+GA G Q+HA +KY +D +VYVGS+LLDMYAR +QMD A +F L
Sbjct: 62 TSLLKATGA-CGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
SKNEVSWNALIAG ARK++GE L F+EM R GF THF+YSS+F+A A G+LEQG+W
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
VHAH+IKSG +L AFVGNT++ MYAKSGS+ DA KVF+R+ KRD+V+WN+MLT AQ+GL
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
GK V FE++ + GI NQ+TFL VLTACSH GL+ EG+ YF +MK + V+PE HYV+
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
FVDLLGRAGLL AL F+ +MP+EPTAAVWGALLGACRMHKN ++G YAA+ +FELDP D
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDD 360
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
+GP +LL NIYAS G+ NDAAR RKMMK +GVKKEPACSWV+ +N+VHMFVA+DD HP+
Sbjct: 361 TGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKS 420
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGST 516
I++ W EI+ +IK+ GYVP+++HVL + ++QERE KL+ HSEK+ALAFALI+ P G++
Sbjct: 421 GDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGAS 480
Query: 517 IHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KNIR+CGDCHSAFK+ SKV +REI+VRDTNRFHHF +G CSCGDYW
Sbjct: 481 IRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 138/263 (52%), Gaps = 4/263 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + D+ + + +L+ YA+C +D A +FD + K+ V+W ALI+G+++
Sbjct: 80 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 139
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E ++ F++M R G FT SS+ A + GA + GR VHA +K G +VG
Sbjct: 140 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQ--GRWVHAHLIKSGQKLTAFVG 197
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+++L MYA+ M DA +F ++ ++ V+WN ++ A+ G++A+ F E+ + G +
Sbjct: 198 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ 257
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK- 251
++ SV TA + G +++GK + Q + VD+ ++G +++A
Sbjct: 258 LNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIF 317
Query: 252 VFNRLLKRDVVSWNSMLTGCAQH 274
VF ++ W ++L C H
Sbjct: 318 VFKMPMEPTAAVWGALLGACRMH 340
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY + + DA +F + S++ VSW LIAG+A+ +A+ +MLR F P F+
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
++S+ A + G G+ +HA +K +VG+ L+DMYA+ ++ A VF+RL+
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
++ VSWN+++ G A+ G+ T+ F +M RNG T+ + +A + G L++G+
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A + K G + T + + ++G + A K M + W +L A
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTA 234
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 9/206 (4%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L++ R VHAH++ S K + NT+L YAK G + +ARK+FD M +D+VTW +++
Sbjct: 175 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 234
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+Q + A+ F ++ + G++ NQ T SVL A G K G+ Y
Sbjct: 235 LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGL-VKEGKHYFDMMKDYNVQP 293
Query: 128 NVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARKSEGEKALRTF 183
+ S +D+ R + +A F+F W AL+ H G+ A
Sbjct: 294 EIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHV 353
Query: 184 SEMLREGFEPTHFSYSSVFTALASTG 209
E+ + P Y+ ASTG
Sbjct: 354 FELDPDDTGPPVLLYN----IYASTG 375
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/545 (61%), Positives = 419/545 (76%), Gaps = 1/545 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L +AR +HAH+ S F D + N++++ Y KCG + EA K+FD+M KDMV+W
Sbjct: 61 CAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSW 120
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QND P AI L ML+ KPN FT +S+LKA GA A D G Q+HA +
Sbjct: 121 TSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA-DSGIGGQIHALAV 179
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +VYVGS+LLDMYAR +MD A +F L+SKN VSWNALI+G ARK +GE AL
Sbjct: 180 KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALM 239
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM R GFE THF+YSS+F+ALA G+LEQGKWVHAH+IKS +L AFVGNT++DMYA
Sbjct: 240 VFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYA 299
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ DA KVF R+L +D+V+WNSMLT AQ+GLGK V FE+M ++GI NQ++FLC
Sbjct: 300 KSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLC 359
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTACSH GL+ EG+ YF ++K++ +EPE HYVT VDLLGRAGLL+ AL FI +MP+EP
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
TAAVWGALL ACRMHKN ++G +AA+ +F+LDP DSGP +LL NIYAS G + AAR RK
Sbjct: 420 TAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRK 479
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK +GVKKEPACSWVE +N+VHMFVANDD HP+ I+K W EIS KI++ GYVPD +
Sbjct: 480 MMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDY 539
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + D+QEREA LQ HSEK+ALAFALI P G+TI I KNIR+CGDCHSAFK+ SKV E
Sbjct: 540 VLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFE 599
Query: 542 REIIV 546
REI++
Sbjct: 600 REIVI 604
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT Y + TA A + +L+ + +HAH+ S AF+ N+L+ +Y K GS+ +A KV
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+++ +D+VSW S++ G AQ+ + + ML+ PN TF +L A
Sbjct: 109 FDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADS 168
Query: 313 DEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G AL K + E YV +D+ R G +D A ++ + W AL+
Sbjct: 169 GIGGQIHALAVK--CDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALI 225
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/514 (64%), Positives = 410/514 (79%), Gaps = 1/514 (0%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
M +DM +WT+LI+GY+QND P+ A+ L MLR KPN FT +S+LKA+GA A+
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSG-I 59
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G Q+HA +KY + +VYVGS+LLDMYAR +MD A +F LESKN VSWNALIAG AR
Sbjct: 60 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
K +GE L F+EM R GFE THF+YSSVF+A+A G+LEQGKWVHAH+IKSG +L AFV
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 179
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
GNT++DMYAKSGS+ DA KVF+ + K+D+V+WNSMLT AQ+GLG+ V FE+M + G+
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
NQ+TFL +LTACSH GL+ EG+ YF +MK+H +EPE HYVT VDLLGRAGLL+ AL
Sbjct: 240 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
FI +MP++PTAAVWGALLG+CRMHKN ++G +AA+ +FELDP D+GP +LL NIYAS G+
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
+ AAR RKMMK +GVKKEPACSWVE +N+VHMFVANDD HP+ I+KKW EIS +I++
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
GYVP++ +VL + D+QER+AKLQ HSEK+ALAFALI+ P G+TI I KNIR+CGDCHSA
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F++ SKV EREI+VRDTNRFHHF G CSCGDYW
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 151/267 (56%), Gaps = 12/267 (4%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + +D+ + + +L+ YA+CG +D A +FD++ K+ V+W ALI+G+++
Sbjct: 63 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 122
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E +++F++M R G + FT SSV A +G GA + G+ VHA +K G + +VG
Sbjct: 123 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ--GKWVHAHMIKSGERLSAFVG 180
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+++LDMYA+ M DA +F ++ K+ V+WN+++ A+ G +A+ F EM + G
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240
Query: 193 PTHFSYSSVFTALASTGSLEQGK----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
++ S+ TA + G +++GK + H ++ ++ +V T+VD+ ++G + D
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEP--EIDHYV--TVVDLLGRAGLLND 296
Query: 249 AEK-VFNRLLKRDVVSWNSMLTGCAQH 274
A +F +K W ++L C H
Sbjct: 297 ALVFIFKMPMKPTAAVWGALLGSCRMH 323
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L++ + VHAH++ S + + NTIL+ YAK G + +ARK+FD + KD+VTW ++++
Sbjct: 158 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTA 217
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
++Q A+ F +M + G+ NQ T S+L A G K G+Q ++ +
Sbjct: 218 FAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL-VKEGKQYFDMMKEHNLEP 276
Query: 128 NVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIA 168
+ +++D+ R ++DA F+F W AL+
Sbjct: 277 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 318
>gi|356544972|ref|XP_003540920.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Glycine max]
Length = 622
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/566 (55%), Positives = 410/566 (72%), Gaps = 16/566 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+CT L KLKE ++VH H+ S FK+D+ +QN +L YA+CG L + + +F+E KDMVT
Sbjct: 73 RCTQLGKLKEGKLVHFHMFNSKFKDDLVIQNFVLFMYARCGNLKDTQHVFNEKLQKDMVT 132
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT++ISGY+QN++ ++ ++LF ++L G K N F LSS+ +HA C
Sbjct: 133 WTSMISGYAQNERAKDTLVLFPRILSEGTKLNXFILSSL----------------IHASC 176
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
YG NV+VGSSL++M AR + + +F KNEVSWNALI G+A+K EGE+AL
Sbjct: 177 WMYGCHSNVFVGSSLVNMXARCGYLGEEXLVFDNSWCKNEVSWNALIGGYAKKGEGEEAL 236
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ M E ++P F+YS + ++ S G LEQGKW+ AH++K G +LV +VGNTL+ MY
Sbjct: 237 ALYLRMQMEAYKPIQFTYSGILSSYLSMGCLEQGKWLLAHLMKPGQKLVVYVGNTLLHMY 296
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G I D EK F++L+K DVVS NSMLT AQHGLGK ++ FE+M+ GI PN +T L
Sbjct: 297 AKLGKIRDVEKFFDKLVKVDVVSCNSMLTRYAQHGLGKEAMQQFEEMISFGIEPNDITVL 356
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL++CSHA LLDEG+ YF LM+K+ +EP+ +HY T +DLLG AGLLD+A FI EMPIE
Sbjct: 357 FVLSSCSHARLLDEGKHYFGLMRKYSIEPKVSHYATIIDLLGXAGLLDQAESFIEEMPIE 416
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+ GALLG +MHKN ++GAYAA+++FEL+P G H LL N+YASAGR D A+
Sbjct: 417 PIVAIXGALLGDSKMHKNTKMGAYAAQQVFELNPSCRGTHTLLVNMYASAGRWGDVAKVI 476
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SGVKKEP CS VE +N+VH+FVAND AHPQ+ IHK W ++++KIK+IGYVPD+S
Sbjct: 477 KIMKDSGVKKEPTCSXVEIENSVHVFVANDAAHPQKEKIHKMWEKLNQKIKEIGYVPDTS 536
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HVL + DQQE+E Q H+EKLAL A ++TPP ST I KNIRV GDCHS+ + + VV
Sbjct: 537 HVLLFVDQQEKELNFQYHTEKLALTLAFLNTPPRSTTRIMKNIRVSGDCHSSINYVALVV 596
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REIIVRDTNRFHHFRDGFCSCGDYW
Sbjct: 597 KREIIVRDTNRFHHFRDGFCSCGDYW 622
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
FE Y+++ G L++GK VH H+ S + + N ++ MYA+ G+++D +
Sbjct: 60 FELDLTLYNTLLKRCTQLGKLKEGKLVHFHMFNSKFKDDLVIQNFVLFMYARCGNLKDTQ 119
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VFN L++D+V+W SM++G AQ+ K T+ F ++L G N +L++ HA
Sbjct: 120 HVFNEKLQKDMVTWTSMISGYAQNERAKDTLVLFPRILSEGTKLNXF----ILSSLIHA 174
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/566 (46%), Positives = 378/566 (66%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +K R +H+ ++ + D + +++ Y+KCG L +AR +FD MP KD++ W
Sbjct: 299 CAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVW 358
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISGYS A+ LF+ M + GL+ NQ TLS++LK++ AG+ + F QVH +
Sbjct: 359 NSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST-AGSQANGFCEQVHTISI 417
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GY ++ YV +SLLD Y + ++DA +F +++ V++ ++I +++ GE+AL+
Sbjct: 418 KSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALK 477
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ M +P F +SS+F A A+ + EQGK +H HV+K G F GN+LV+MYA
Sbjct: 478 MYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYA 537
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI+DA +FN + R +VSW++M+ G AQHG G+ ++ F +ML+NGI PN +T +
Sbjct: 538 KCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVS 597
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+HAGL+ E + +F LM+K G+ P + HY VD+LGR G LD A+ ++EMP +
Sbjct: 598 VLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQ 657
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+AAVWGALLGA R+HKN+ELG +AAE + L+P SG HILLANIYAS G ++ A+ R
Sbjct: 658 ASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVR 717
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MK S VKKEP SW+E K+ V+ F+ D +HP+ I+ K ++ E++ GYVP
Sbjct: 718 RSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIE 777
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +Q E+E L HSEKLA+AF LI+TPPG+ I +KKN+RVC DCH+AFKF SKV
Sbjct: 778 TDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVA 837
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHHFRDG CSCGDYW
Sbjct: 838 SREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 226/431 (52%), Gaps = 15/431 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ VH +++ + +D N +L+ YAK GC + A +F E+P D+V+W
Sbjct: 198 CAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSW 257
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G +++ + A+ L +M + P+ FTLSS LKA A K GRQ+H+ +
Sbjct: 258 NAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGL-VKLGRQLHSALM 316
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + + +VG L+DMY++ + DA +F + K+ + WN++I+G++ +A+
Sbjct: 317 KMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMS 376
Query: 182 TFSEMLREGFEPTHFSYSSVFTALAST-GSLEQG--KWVHAHVIKSGGQLVAFVGNTLVD 238
F+ M +EG E F+ +++ T L ST GS G + VH IKSG Q +V N+L+D
Sbjct: 377 LFTNMYKEGLE---FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLD 433
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
Y K +EDA KVF D+V++ SM+T +Q+GLG+ ++ + +M I P+
Sbjct: 434 SYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFI 493
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F + AC++ ++G+ + K G+ + + V++ + G +D A E+
Sbjct: 494 FSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEIS 553
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLN 414
+ W A++G H + G A + +++ + P HI L ++ ++ AG +
Sbjct: 554 WRGIVS-WSAMIGGLAQHGH---GRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVT 609
Query: 415 DAARARKMMKE 425
+A R +M++
Sbjct: 610 EARRFFGLMEK 620
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 211/458 (46%), Gaps = 74/458 (16%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
+N Y+KC C ARKL + D+V+W+ALISGY QN + E A++ + +M LG K N+
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 94 FTLSSVLKASG---------------------------------------AGATDDKFGR 114
FT SSVLK AG D+ +G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+VH + +K GYD + + ++LLDMYA+ + A +F + + VSWNA+IAG
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ + AL+ +M P+ F+ SS A A+ G ++ G+ +H+ ++K + +FVG
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+DMY+K G ++DA VF+ + +DV+ WNS+++G + G + F M + G+
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 295 NQVTFLCVL--TACSHAGLLDEG------------QGYFA--LMKKHG------------ 326
NQ T +L TA S A E GY A L+ +G
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 327 -VEPEE--AHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVE 380
V P E Y + + + GL + ALK M I+P A ++ +L AC E
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508
Query: 381 LGAYAAERIFELD-PHDSGPHILLANIYASAGRLNDAA 417
G + + D L N+YA G ++DA+
Sbjct: 509 QGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDAS 546
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 60/232 (25%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + ++ + G +HA +I+ G + N LV++Y+K A K+
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLGLLGLR---NRLVNLYSKCQCFRVARKLVIDSS 109
Query: 258 KRDVVSWNSMLTGCAQHGLG-KATVRWFE------------------------------- 285
+ D+VSW+++++G Q+G G +A + ++E
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 286 --------KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV--------EP 329
+M+ GI+PN+ + VL AC AGL DE G MK HG +P
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNAC--AGLEDENYG----MKVHGYLIKLGYDSDP 223
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
A+ +D+ ++G + A+ E+P +P W A++ C +H+ +L
Sbjct: 224 FSAN--ALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVLHEKNDL 272
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/566 (45%), Positives = 370/566 (65%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L++ + +H + + S ++D+ + N ++N YAKCG ++ A KLF+ MP++D+ +W
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASW 290
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GYS N Q A+ F++M G+KPN T+ SVL A ++ G+Q+H + +
Sbjct: 291 NAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQ-GQQIHGYAI 349
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ N VG++L++MYA+ ++ A+ LF + KN V+WNA+I+G+++ +AL
Sbjct: 350 RSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALA 409
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM +G +P F+ SV A A +LEQGK +H + I+SG + VG LVD+YA
Sbjct: 410 LFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYA 469
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A+K+F R+ ++DVVSW +M+ HG G+ + F KM G + + F
Sbjct: 470 KCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTA 529
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+LTACSHAGL+D+G YF MK +G+ P+ HY VDLLGRAG LD A I+ M +E
Sbjct: 530 ILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLE 589
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VWGALLGACR+H N+ELG AA+ +FELDP ++G ++LL+NIYA A R D A+ R
Sbjct: 590 PDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLR 649
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMMKE GVKK+P CS V V F+ D HPQ I+ + E++++ GYVP+++
Sbjct: 650 KMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTN 709
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +++ +E L HSEKLA++F +I+T PG I I KN+RVC DCH+A KF SK+V
Sbjct: 710 LALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIV 769
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHH ++GFCSCGDYW
Sbjct: 770 GREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 213/379 (56%), Gaps = 2/379 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R VH I+ F++D+ + + + Y KCG L+ AR++FD MP +D+V+W
Sbjct: 130 CGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSW 189
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GYSQN QP A+ LFS+M G+KPN TL SV+ ++ G+Q+H + +
Sbjct: 190 NAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQ-GKQIHCYAI 248
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + +V V + L++MYA+ ++ A LF + ++ SWNA+I G++ S+ +AL
Sbjct: 249 RSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALA 308
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+ M G +P + SV A A +LEQG+ +H + I+SG + VGN LV+MYA
Sbjct: 309 FFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYA 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A K+F R+ K++VV+WN++++G +QHG + F +M GI P+ +
Sbjct: 369 KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVS 428
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL AC+H L++G+ + G E VD+ + G ++ A K MP E
Sbjct: 429 VLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQ 487
Query: 362 TAAVWGALLGACRMHKNVE 380
W ++ A +H + E
Sbjct: 488 DVVSWTTMILAYGIHGHGE 506
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 174/321 (54%), Gaps = 2/321 (0%)
Query: 56 KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
+ V W I GY +N A+ L+ QM R G+ P++ SV+KA G+ +D + GR+
Sbjct: 83 NNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGS-QSDLQAGRK 141
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
VH + G++ +V VG++L MY + +++A +F + ++ VSWNA+IAG+++ +
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+AL FSEM G +P + SV A +LEQGK +H + I+SG + V N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV+MYAK G++ A K+F R+ RDV SWN+++ G + + + +F +M GI PN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+T + VL AC+H L++GQ + G E + V++ + G ++ A K
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381
Query: 356 EMPIEPTAAVWGALLGACRMH 376
MP + A W A++ H
Sbjct: 382 RMPKKNVVA-WNAIISGYSQH 401
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
++ + V W + G ++G +R + +M R GI P+++ FL V+ AC L G+
Sbjct: 81 IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ G E + + + G L+ A + MP + W A++
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVS-WNAIIAG 195
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/566 (45%), Positives = 371/566 (65%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R +H+ ++ +D + +++ Y+KC +D+AR +F MP +DM+ W
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISG+SQN++ E A LF M G+ NQ TLS+VLK S A + RQ+HA L
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLK-SIAALQANYMCRQIHALSL 340
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G++++ YV +SL+D Y + ++DA +F + V + +L+ +A+ +GE+ALR
Sbjct: 341 KSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALR 400
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ EM G +P F SS+ A AS + EQGK VH H++K G F GN+LV+MYA
Sbjct: 401 LYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYA 460
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA F+R+ R +VSW++M+ G AQHG GK ++ F++ML+ G+ PN +T +
Sbjct: 461 KCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVS 520
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC+HAGL+ E + YF MK G+EP + HY +DLLGRAG L+ A++ + +MP +
Sbjct: 521 VLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQ 580
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VWGALLGA R+HKN++LG AAE + L+P SG H+LLANIYAS G + AR R
Sbjct: 581 ANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVR 640
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++MK+ VKKEP SW+E K+ V+ F+ D +H + I+ K E+S+ +K+ GYVP
Sbjct: 641 RLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVE 700
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L ++ E+E L HSEKLA+AF LI+TPPG+ I +KKN+R+C DCH+ KF SK+V
Sbjct: 701 IDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIV 760
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDTNRFHHFR+G CSCG+YW
Sbjct: 761 SREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 220/462 (47%), Gaps = 36/462 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT K L + VH ++ + F +D + N+++ YAKCG +AR LFD +P + +V+W
Sbjct: 20 CTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL S Y +D A+ LF M+ G++PN+F+LSS++ G D GR++H + +
Sbjct: 80 NALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVC-TGLEDSVQGRKIHGYLI 138
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GYD + + ++L+DMYA+ ++DA +F + + VSWNA+IAG +AL
Sbjct: 139 KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALE 198
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EM + G P F+ SS A A E G+ +H+ +IK +F+G L+DMY+
Sbjct: 199 LLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYS 258
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K S++DA VF + +RD+++WN++++G +Q+ + F M GI NQ T
Sbjct: 259 KCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLST 318
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP--- 358
VL + + + AL K G E + + +D G+ G ++ A + E P
Sbjct: 319 VLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVD 378
Query: 359 -------------------------------IEPTAAVWGALLGACRMHKNVELGAYAAE 387
I+P + V +LL AC E G
Sbjct: 379 LVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHV 438
Query: 388 RIFELD-PHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
I + D L N+YA G + DA+ A + G+
Sbjct: 439 HILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGI 480
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M LG+K N+F SVLKA D G+QVH + G+D + +V +SL+ +YA+
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTV-TKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCG 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
DA LF A+ ++ VSWNAL + + +A+ F +M+ G P FS SS+
Sbjct: 60 GFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
QG+ +H ++IK G AF N LVDMYAK G +EDA VF+ + K D+VS
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+++ GC H + +M ++G+ PN T L AC+ L + G+ + +
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
K + + V +D+ + +D A + MP E W A++
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVI 285
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/569 (43%), Positives = 379/569 (66%), Gaps = 4/569 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C ++E + VHAH++ + ++ + ++ ++ Y KC CL +AR++ DEMP +++V+
Sbjct: 19 ECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVS 78
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISGYSQ A+ LF +ML G PN+FT ++VL S ++ + GRQ+H+
Sbjct: 79 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL-TSCTSSSGFQLGRQIHSLV 137
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K ++ +++VGSSLLDMYA+ ++ +A +F L ++ VS A+I+G+A+ E+AL
Sbjct: 138 IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEAL 197
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + REG + +Y+SV TAL+ +L+ G+ VH+HV+++ + N+L+DMY
Sbjct: 198 DLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMY 257
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTF 299
+K GS+ + ++F+ + +R V+SWN+ML G ++HGLG+ V F+ M N + P+ VTF
Sbjct: 258 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 317
Query: 300 LCVLTACSHAGLLDEGQGYFALM--KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL+ CSH G+ D G F M +K G EPE HY VDL GRAG ++ A +FI++M
Sbjct: 318 LAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 377
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P EPTAA+WG+LLGACR+H+NV +G + A R+ E++ ++G +++L+N+YASAGR +D
Sbjct: 378 PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVR 437
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R++MKE V KEP SW+E +H F A+D +HP++ + K RE+S KIK+ GYVP
Sbjct: 438 TVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVP 497
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
+ S VL D +++E LQ HSEKLALAF LI TP G+ + I KN+R+C DCH+ KF S
Sbjct: 498 ELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLS 557
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V RE+ +RD NRFHH G CSCGDYW
Sbjct: 558 RVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
+G E Y SV T S ++ +G+ VHAH+IK+ + ++ L+ +Y K + D
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A +V + + +R+VVSW +M++G +Q G + F +ML +G APN+ TF VLT+C+
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ G+ +L+ K E + +D+ +AG + A + +P
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/569 (43%), Positives = 379/569 (66%), Gaps = 4/569 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C ++E + VHAH++ + ++ + ++ ++ Y KC CL +AR++ DEMP +++V+
Sbjct: 486 ECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVS 545
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISGYSQ A+ LF +ML G PN+FT ++VL S ++ + GRQ+H+
Sbjct: 546 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL-TSCTSSSGFQLGRQIHSLV 604
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K ++ +++VGSSLLDMYA+ ++ +A +F L ++ VS A+I+G+A+ E+AL
Sbjct: 605 IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEAL 664
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + REG + +Y+SV TAL+ +L+ G+ VH+HV+++ + N+L+DMY
Sbjct: 665 DLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMY 724
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTF 299
+K GS+ + ++F+ + +R V+SWN+ML G ++HGLG+ V F+ M N + P+ VTF
Sbjct: 725 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 784
Query: 300 LCVLTACSHAGLLDEGQGYFALM--KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL+ CSH G+ D G F M +K G EPE HY VDL GRAG ++ A +FI++M
Sbjct: 785 LAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 844
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P EPTAA+WG+LLGACR+H+NV +G + A R+ E++ ++G +++L+N+YASAGR +D
Sbjct: 845 PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVR 904
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R++MKE V KEP SW+E +H F A+D +HP++ + K RE+S KIK+ GYVP
Sbjct: 905 TVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVP 964
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
+ S VL D +++E LQ HSEKLALAF LI TP G+ + I KN+R+C DCH+ KF S
Sbjct: 965 ELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLS 1024
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V RE+ +RD NRFHH G CSCGDYW
Sbjct: 1025 RVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM +G E Y SV T S ++ +G+ VHAH+IK+ + ++ L+ +Y K
Sbjct: 467 EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ DA +V + + +R+VVSW +M++G +Q G + F +ML +G APN+ TF VLT
Sbjct: 527 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+C+ + G+ +L+ K E + +D+ +AG + A + +P
Sbjct: 587 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/566 (44%), Positives = 367/566 (64%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH +L + ++ D+ + +L+ Y K G ++ ++F+EMP D++ W
Sbjct: 152 CIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPW 211
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +IS Y+Q++Q A+ LF QM R + PNQFT +SVL+ S A + + G+QVH L
Sbjct: 212 SFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQ-SCASIENLQLGKQVHCHVL 270
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D NV+V ++L+D+YA+ ++D++ LF L ++NEV+WN +I G+ + +G+KAL
Sbjct: 271 KVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALS 330
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ ML + + +YSSV A AS ++E G +H+ +K+ VGN L+DMYA
Sbjct: 331 LYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYA 390
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI++A VF+ L +RD +SWN+M++G + HGL ++ F+ M PN++TF+
Sbjct: 391 KCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVS 450
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACS+AGLLD GQ YF ++++ +G+EP HY V LLGR+G LD+A+K I E+P+E
Sbjct: 451 ILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLE 510
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VW ALLGAC +H +V+LG +A++I ++DP D H+LL+NIYA R N A R
Sbjct: 511 PNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVR 570
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK GVKKEP SW+E + VH F D +HP MI ++ K ++ GYVPD +
Sbjct: 571 KFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLN 630
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + E++ L VHSE+LALAF LI TP I I KN+R+C DCHSA K SK+V
Sbjct: 631 AVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIV 690
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+II+RD NRFHHF+DG CSCGDYW
Sbjct: 691 QRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 201/363 (55%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA I +++ + +++AYA CG ++ AR+ FD + KDMV+WT +++ Y++ND+
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++++ LF++M +G PN FT + VLKA G G+ VH LK Y+ ++YVG
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKAC-IGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
LLD+Y +F +D +F + + + W+ +I+ +A+ ++ +A+ F +M R P
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F+++SV + AS +L+ GK VH HV+K G FV N L+D+YAK G ++++ K+F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
L R+ V+WN+M+ G Q G G + ++ ML + ++VT+ VL AC+ ++
Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAME 361
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G +L K + + +D+ + G + A + + +M E W A++
Sbjct: 362 LGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGY 420
Query: 374 RMH 376
MH
Sbjct: 421 SMH 423
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 159/306 (51%), Gaps = 1/306 (0%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
MP ++ V++ LI GY Q+ Q + + LFS++ R G + N F +++LK +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLL-VSVECAEL 59
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+HA K G++ N +VG++L+D YA ++ A F A+ K+ VSW ++A +A
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ +L+ F+EM GF P HF+++ V A + GK VH V+K+ ++ +V
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G L+D+Y K G D +VF + K DV+ W+ M++ AQ + V F +M R +
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PNQ TF VL +C+ L G+ + K G++ +D+ + G LD ++K
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299
Query: 353 FIREMP 358
E+P
Sbjct: 300 LFMELP 305
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/568 (44%), Positives = 377/568 (66%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C ++K++ A+ +H ++ + D+ ++ ++ AY+KC +D+A KLF M V+++V+
Sbjct: 304 CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS 363
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISGY QN + + A+ LF QM R G++PN FT S++L A+ A + Q+HA
Sbjct: 364 WTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPS-----QIHALV 418
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ + VG++L D Y++ ++A +F ++ K+ V+W+A+++G+A+ + E A+
Sbjct: 419 VKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAV 478
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F ++ +EG EP F++SSV A A+ T S+EQGK H+ IKSG V + LV M
Sbjct: 479 KIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTM 538
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G+IE A +VF R + RD+VSWNSM++G AQHG GK +++ FE+M + + +TF
Sbjct: 539 YAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITF 598
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ V++AC+HAGL++EGQ YF LM K + + P HY VDL RAG+L++A+ I +MP
Sbjct: 599 IGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 658
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
A +W LL ACR+H NV+LG AAE++ L P DS ++LL+NIYA+AG + A+
Sbjct: 659 FPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAK 718
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M VKKE SW+E KN F+A D +HPQ I+ K E+S ++K GY PD
Sbjct: 719 VRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPD 778
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ +VL +++ +E L HSE+LA+AF LI+TPPG+ I I KN+RVCGDCH+ K SK
Sbjct: 779 TKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISK 838
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ R+I+VRD+NRFHHF+ G CSCGDYW
Sbjct: 839 IEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 196/378 (51%), Gaps = 11/378 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + F D+++ ++++ Y K +++ ++FDEM VK++V+WT+L++GY QN
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ LFSQM G+KPN FT ++VL A +K G QVH +K G D ++VG+
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEK-GVQVHTMVIKSGLDSTIFVGN 232
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
S+++MY++ + DA +F ++E++N VSWN++IAG +A F M EG +
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T +++V A+ + K +H VIK+G + L+ Y+K I+DA K+F
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 254 NRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
+ ++VVSW ++++G Q+G + F +M R G+ PN T+ +LTA +
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV--- 409
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
AL+ K E + D + G + A K I E+ E W A+L
Sbjct: 410 -SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAK-IFELIDEKDIVAWSAMLSG 467
Query: 373 CRMHKNVELGAYAAERIF 390
++E A +IF
Sbjct: 468 YAQMGDIE----GAVKIF 481
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 207/421 (49%), Gaps = 45/421 (10%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
+++LFDE P + + L+ +S+NDQ + A+ LF + R G + +LS VLK G
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
D G+QVH C+K G+ +V VG+SL+DMY + + ++D +F + KN VSW +
Sbjct: 105 -LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
L+AG+ + E+AL+ FS+M EG +P F++++V LA+ G++E+G VH VIKSG
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
FVGN++V+MY+KS + DA+ VF+ + R+ VSWNSM+ G +GL F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 286 KMLRNGIAPNQVTFLCVLTACS-----------HAGLLDEGQGY---------------- 318
+M G+ Q F V+ C+ H ++ G +
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 319 --------FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF---IREMPIEPTAAVWG 367
F +M HGV+ + + + G DRA+ +R + P +
Sbjct: 344 EIDDAFKLFCMM--HGVQ-NVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYS 400
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
+L A ++ A + +E P L++ Y+ G N+AA+ +++ E
Sbjct: 401 TILTANAAVSPSQIHALVVKTNYENSPSVGTA---LSDSYSKIGDANEAAKIFELIDEKD 457
Query: 428 V 428
+
Sbjct: 458 I 458
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/561 (45%), Positives = 376/561 (67%), Gaps = 3/561 (0%)
Query: 8 LKE-ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
LKE R +H+ ++ ++D+ + +++ Y+KC L++AR F+ +P KD++ W A+IS
Sbjct: 374 LKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 433
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GYSQ + A+ LF +M + G+ NQ TLS++LK++ AG RQVH +K G+
Sbjct: 434 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST-AGLQVVHVCRQVHGLSVKSGFH 492
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++YV +SL+D Y + ++DA +F + VS+ ++I +A+ +GE+AL+ F EM
Sbjct: 493 SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM 552
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+P F SS+ A A+ + EQGK +H H++K G L F GN+LV+MYAK GSI
Sbjct: 553 QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSI 612
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+DA + F+ L +R +VSW++M+ G AQHG G+ ++ F +ML+ G++PN +T + VL AC
Sbjct: 613 DDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 672
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+HAGL+ E + YF M++ G +P + HY +DLLGRAG ++ A++ + +MP E A+V
Sbjct: 673 NHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASV 732
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGA R+HK+VELG AAE +F L+P SG H+LLANIYASAG+ + A R++M++
Sbjct: 733 WGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRD 792
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
S VKKEP SW+E K+ V+ F+ D +H + I+ K E+S+ + + GYVP L
Sbjct: 793 SKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHD 852
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+Q E+E L HSEKLA+AF LI+TP G+ I +KKN+RVC DCH+AFK+ K+V REII
Sbjct: 853 VEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREII 912
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD NRFHHF+DG CSCGDYW
Sbjct: 913 VRDINRFHHFKDGSCSCGDYW 933
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 204/370 (55%), Gaps = 2/370 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C K L+ +HAHI S +D +++N ++N Y+KC ARKL DE D+V+
Sbjct: 65 QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVS 124
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+ALISGY+QN A++ F +M LG+K N+FT SSVLKA D + G+QVH
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI-VKDLRIGKQVHGVV 183
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G++ +V+V ++L+ MYA+ D+ D+ LF + +N VSWNAL + + + +A+
Sbjct: 184 VVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAV 243
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM+ G +P FS SS+ A +GK +H ++IK G F N LVDMY
Sbjct: 244 GLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMY 303
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + DA VF ++ + D+VSWN+++ GC H + + +M R+GI PN T
Sbjct: 304 AKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLS 363
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
L AC+ GL + G+ + + K +E + V VD+ + LL+ A +P E
Sbjct: 364 SALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-E 422
Query: 361 PTAAVWGALL 370
W A++
Sbjct: 423 KDLIAWNAII 432
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 239/465 (51%), Gaps = 42/465 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +K L+ + VH ++ S F+ D+ + NT++ YAKC ++++LFDE+P +++V+W
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW 226
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL S Y Q D A+ LF +M+ G+KPN+F+LSS++ A G D G+ +H + +
Sbjct: 227 NALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC-TGLRDSSRGKIIHGYLI 285
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GYDW+ + ++L+DMYA+ + DA +F ++ + VSWNA+IAG E+AL
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M R G P F+ SS A A G E G+ +H+ ++K + FV LVDMY+
Sbjct: 346 LLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYS 405
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF-- 299
K +EDA FN L ++D+++WN++++G +Q+ + F +M + GI NQ T
Sbjct: 406 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 465
Query: 300 -------LCVLTACSHAGLLDEGQGYF-------ALMKKHG----VEPEEAHY------- 334
L V+ C L G+ +L+ +G VE E +
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525
Query: 335 -VTFVDLL---GRAGLLDRALKF---IREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
V+F ++ + G + ALK +++M ++P V +LL AC E G
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585
Query: 388 RI----FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
I F LD L N+YA G ++DA RA + E G+
Sbjct: 586 HILKYGFVLDIFAGNS---LVNMYAKCGSIDDAGRAFSELTERGI 627
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 225/428 (52%), Gaps = 9/428 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+ +I+H +++ + D N +++ YAK G L +A +F+++ D+V+W
Sbjct: 268 CTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSW 327
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G ++ E A+ L QM R G+ PN FTLSS LKA AG + GRQ+H+ +
Sbjct: 328 NAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC-AGMGLKELGRQLHSSLM 386
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +++V L+DMY++ D ++DA F L K+ ++WNA+I+G+++ E +AL
Sbjct: 387 KMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALS 446
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM +EG + S++ + A + + VH +KSG +V N+L+D Y
Sbjct: 447 LFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYG 506
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K +EDAE++F D+VS+ SM+T AQ+G G+ ++ F +M + P++
Sbjct: 507 KCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 566
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC++ ++G+ + K+G + + V++ + G +D A + E+ E
Sbjct: 567 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ER 625
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDAA 417
W A++G H + G A + ++ P HI L ++ + AG + +A
Sbjct: 626 GIVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK 682
Query: 418 RARKMMKE 425
+ M+E
Sbjct: 683 LYFESMEE 690
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F PT SYS + + +T SL G +HAH+ KSG + N L+++Y+K + A
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
K+ + + D+VSW+++++G AQ+GLG + F +M G+ N+ TF VL ACS
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L G+ ++ G E + T V + + + + E+P E W AL
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP-ERNVVSWNALF 230
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIYASAGRLNDAARAR 420
+ ++ A +E+ P+ L+++ + L D++R +
Sbjct: 231 SC---YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/556 (45%), Positives = 373/556 (67%), Gaps = 2/556 (0%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H+ ++ ++D+ + +++ Y+KC L++AR F+ +P KD++ W A+ISGYSQ
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQY 411
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ A+ LF +M + G+ NQ TLS++LK++ AG RQVH +K G+ ++YV
Sbjct: 412 WEDMEALSLFVEMHKEGIGFNQTTLSTILKST-AGLQVVHVCRQVHGLSVKSGFHSDIYV 470
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+SL+D Y + ++DA +F + VS+ ++I +A+ +GE+AL+ F EM
Sbjct: 471 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 530
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P F SS+ A A+ + EQGK +H H++K G L F GN+LV+MYAK GSI+DA +
Sbjct: 531 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 590
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
F+ L +R +VSW++M+ G AQHG G+ ++ F +ML+ G++PN +T + VL AC+HAGL
Sbjct: 591 AFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGL 650
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ E + YF M++ G +P + HY +DLLGRAG ++ A++ + +MP E A+VWGALL
Sbjct: 651 VTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 710
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GA R+HK+VELG AAE +F L+P SG H+LLANIYASAG+ + A R++M++S VKK
Sbjct: 711 GAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKK 770
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
EP SW+E K+ V+ F+ D +H + I+ K E+S+ + + GYVP L +Q E
Sbjct: 771 EPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSE 830
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E L HSEKLA+AF LI+TP G+ I +KKN+RVC DCH+AFK+ K+V REIIVRD N
Sbjct: 831 KELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDIN 890
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF+DG CSCGDYW
Sbjct: 891 RFHHFKDGSCSCGDYW 906
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 167/290 (57%), Gaps = 1/290 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C K L+ +HAHI S +D +++N ++N Y+KC ARKL DE D+V+
Sbjct: 65 QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVS 124
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+ALISGY+QN A++ F +M LG+K N+FT SSVLKA D + G+QVH
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI-VKDLRIGKQVHGVV 183
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G++ +V+V ++L+ MYA+ D+ D+ LF + +N VSWNAL + + + +A+
Sbjct: 184 VVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAV 243
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM+ G +P FS SS+ A +GK +H ++IK G F N LVDMY
Sbjct: 244 GLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMY 303
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
AK G + DA VF ++ + D+VSWN+++ GC H + + +M R
Sbjct: 304 AKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ 353
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 228/465 (49%), Gaps = 69/465 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +K L+ + VH ++ S F+ D+ + NT++ YAKC ++++LFDE+P +++V+W
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW 226
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL S Y Q D A+ LF +M+ G+KPN+F+LSS++ A G D G+ +H + +
Sbjct: 227 NALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC-TGLRDSSRGKIIHGYLI 285
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GYDW+ + ++L+DMYA+ + DA +F ++ + VSWNA+IAG E+AL
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M R+ +H+ ++K + FV LVDMY+
Sbjct: 346 LLGQMKRQ---------------------------LHSSLMKMDMESDLFVSVGLVDMYS 378
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF-- 299
K +EDA FN L ++D+++WN++++G +Q+ + F +M + GI NQ T
Sbjct: 379 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 438
Query: 300 -------LCVLTACSHAGLLDEGQGYF-------ALMKKHG----VEPEEAHY------- 334
L V+ C L G+ +L+ +G VE E +
Sbjct: 439 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 498
Query: 335 -VTFVDLL---GRAGLLDRALKF---IREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
V+F ++ + G + ALK +++M ++P V +LL AC E G
Sbjct: 499 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 558
Query: 388 RI----FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
I F LD L N+YA G ++DA RA + E G+
Sbjct: 559 HILKYGFVLDIFAGNS---LVNMYAKCGSIDDAGRAFSELTERGI 600
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 159/276 (57%), Gaps = 11/276 (3%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + R VH + S F +DI + N+++++Y KC +++A ++F+E + D+V++T++
Sbjct: 446 LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSM 505
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ Y+Q Q E A+ LF +M + LKP++F SS+L A A + + G+Q+H LKYG
Sbjct: 506 ITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC-ANLSAFEQGKQLHVHILKYG 564
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +++ G+SL++MYA+ +DDA F+ L + VSW+A+I G A+ G +AL+ F+
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFN 624
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-----NTLVDM 239
+ML+EG P H + SV A G + + K +S +L F ++D+
Sbjct: 625 QMLKEGVSPNHITLVSVLGACNHAGLVTEAKL----YFESMEELFGFKPMQEHYACMIDL 680
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G I +A ++ N++ + + W ++L H
Sbjct: 681 LGRAGKINEAVELVNKMPFEANASVWGALLGAARIH 716
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 14/324 (4%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G Q+HA K G + + + L+++Y++ A L + VSW+ALI+G+A+
Sbjct: 75 GLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQ 134
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
G AL F EM G + F++SSV A + L GK VH V+ SG + FV
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
NTLV MYAK D++++F+ + +R+VVSWN++ + Q V F +M+ +GI
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI 254
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYF--ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
PN+ + ++ AC+ GL D +G + K G + + VD+ + G L A
Sbjct: 255 KPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVE-----LGAYAAE---RIFELD-PHDSGPHI 401
+ ++ +P W A++ C +H++ E LG + + ++D D +
Sbjct: 313 ISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSV 371
Query: 402 LLANIYASAGRLNDAARARKMMKE 425
L ++Y+ L DA A ++ E
Sbjct: 372 GLVDMYSKCDLLEDARMAFNLLPE 395
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 15/220 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L ++ + +H HIL F DI N+++N YAKCG +D+A + F E+ + +V+W
Sbjct: 544 CANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSW 603
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I G +Q+ A+ LF+QML+ G+ PN TL SVL A + +
Sbjct: 604 SAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEE 663
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
+G+ + ++D+ R ++++A L + N W AL+ G AR + +
Sbjct: 664 LFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL-GAARIHKDVELG 722
Query: 181 RTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKW 216
R +EML EP TH ++++ + GKW
Sbjct: 723 RRAAEMLFI-LEPEKSGTHVLLANIYAS--------AGKW 753
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
LI + SE + + + + F PT SYS + + +T SL G +HAH+ KSG
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ N L+++Y+K A K+ + + D+VSW+++++G AQ+GLG + F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M G+ N+ TF VL ACS L G+ ++ G E + T V + +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 346 LLDRALKFIREMPIEPTAAVWGALL 370
+ + E+P E W AL
Sbjct: 207 EFLDSKRLFDEIP-ERNVVSWNALF 230
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/566 (46%), Positives = 366/566 (64%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ R +H ++ + +D + +++ YAK LD+ARK+FD M +D++
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILC 372
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALISG S + + A+ LF ++ + GL N+ TL++VLK++ A RQVHA +
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST-ASLEAASTTRQVHALAV 431
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ ++ +V + L+D Y + + DA +F S + ++ ++I ++ GE A++
Sbjct: 432 KIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIK 491
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EMLR+G EP F SS+ A AS + EQGK VHAH+IK AF GN LV YA
Sbjct: 492 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDAE F+ L +R VVSW++M+ G AQHG GK + F +M+ GI PN +T
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC+HAGL+DE + YF MK+ G++ E HY +DLLGRAG LD A++ + MP +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A++WGALLGA R+HK+ ELG AAE++F L+P SG H+LLAN YASAG N+ A+ R
Sbjct: 672 ANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVR 731
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+S +KKEPA SW+E K+ VH F+ D +HP I+ K E+ + + + G+VP+
Sbjct: 732 KLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVD 791
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D+ E+E L HSE+LA+AFAL+STPPG+ I +KKN+R+C DCH AFKF SK+V
Sbjct: 792 VDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIV 851
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD NRFHHFRDG CSCGDYW
Sbjct: 852 SREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 187/346 (54%), Gaps = 7/346 (2%)
Query: 10 EARIVHAHILGSAFKND--IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+A + AH+ S K+ + +N +++ Y+KC AR++FDE+P V+W++L++
Sbjct: 18 QALLPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTA 77
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS N P +AI F M G+ N+F L VLK D + G QVHA + G+
Sbjct: 78 YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC----VPDARLGAQVHAMAMATGFGS 133
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V+V ++L+ MY F MDDA +F +S +N VSWN L++ + + + A++ F EM
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 193
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G +PT F +S V A + ++E G+ VHA V++ G F N LVDMY K G +
Sbjct: 194 VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ A +F ++ DVVSWN++++GC +G + +M +G+ PN T +L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
S AG D G+ M K + ++ V VD+ + LD A K
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 214/429 (49%), Gaps = 11/429 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + ++ R VHA ++ + D+ N +++ Y K G +D A +F++MP D+V+W
Sbjct: 212 CTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSW 271
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
ALISG N AI L QM GL PN FTLSS+LKA SGAGA D GRQ+H F
Sbjct: 272 NALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD--LGRQIHGFM 329
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + Y+G L+DMYA+ +DDA +F + ++ + NALI+G + ++AL
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ +EG + ++V + AS + + VHA +K G A V N L+D Y
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + DA +VF D+++ SM+T +Q G+ ++ F +MLR G+ P+
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC+ ++G+ A + K + V + G ++ A +P E
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-E 568
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDA 416
W A++G H + G A E + P HI + ++ + AG +++A
Sbjct: 569 RGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 417 ARARKMMKE 425
R MKE
Sbjct: 626 KRYFNSMKE 634
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 226/467 (48%), Gaps = 48/467 (10%)
Query: 5 LKKLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVT 60
LK + +AR+ VHA + + F +D+ + N ++ Y G +D+AR++F+E ++ V+
Sbjct: 110 LKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+S Y +NDQ +AI +F +M+ G++P +F S V+ A G+ + + GRQVHA
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC-TGSRNIEAGRQVHAMV 228
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ GYD +V+ ++L+DMY + ++D A +F + + VSWNALI+G +A+
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+M G P F+ SS+ A + G+ + G+ +H +IK+ ++G LVDMY
Sbjct: 289 ELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK+ ++DA KVF+ + RD++ N++++GC+ G + F ++ + G+ N+ T
Sbjct: 349 AKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLA 408
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV------------------------- 335
VL + + + AL K G +AH V
Sbjct: 409 AVLKSTASLEAASTTRQVHALAVKIGF-IFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467
Query: 336 -------TFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG--- 382
+ + L + + A+K EM +EP V +LL AC E G
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 383 -AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A+ +R F D L YA G + DA A + E GV
Sbjct: 528 HAHLIKRQFMSDAFAGNA---LVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 11/274 (4%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G +HA LK G + + L+ Y++ + A +F + VSW++L+ ++
Sbjct: 23 GAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
A++ F M EG F+ V + G VHA + +G FV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFV 137
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
N LV MY G ++DA +VFN +R+ VSWN +++ ++ ++ F +M+ +G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
I P + F CV+ AC+ + ++ G+ A++ + G + + VD+ + G +D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 352 KFIREMPIEPTAAVWGALLGACRM----HKNVEL 381
+MP + W AL+ C + H+ +EL
Sbjct: 258 VIFEKMP-DSDVVSWNALISGCVLNGHDHRAIEL 290
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 5/176 (2%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ S T A+ +L G +HA ++KSG +A N L+ Y+K A +VF+ +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGS--LASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
VSW+S++T + +GL ++ ++ F M G+ N+ VL A L G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GA 120
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A+ G + V + G G +D A + E E A W L+ A
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/566 (46%), Positives = 366/566 (64%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ R +H ++ + +D + +++ YAK LD+ARK+FD M +D++
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILC 372
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALISG S + + A+ LF ++ + GL N+ TL++VLK++ A RQVHA +
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST-ASLEAASTTRQVHALAV 431
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ ++ +V + L+D Y + + DA +F S + ++ ++I ++ GE A++
Sbjct: 432 KIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIK 491
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EMLR+G EP F SS+ A AS + EQGK VHAH+IK AF GN LV YA
Sbjct: 492 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDAE F+ L +R VVSW++M+ G AQHG GK + F +M+ GI PN +T
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC+HAGL+DE + YF MK+ G++ E HY +DLLGRAG LD A++ + MP +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A++WGALLGA R+HK+ ELG AAE++F L+P SG H+LLAN YASAG N+ A+ R
Sbjct: 672 ANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVR 731
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+S +KKEPA SW+E K+ VH F+ D +HP I+ K E+ + + + G+VP+
Sbjct: 732 KLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVD 791
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D+ E+E L HSE+LA+AFAL+STPPG+ I +KKN+R+C DCH AFKF SK+V
Sbjct: 792 VDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIV 851
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD NRFHHFRDG CSCGDYW
Sbjct: 852 SREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 186/346 (53%), Gaps = 7/346 (2%)
Query: 10 EARIVHAHILGSAFKND--IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+A + AH+ S K+ + +N +++ Y+KC AR+ FDE+P V+W++L++
Sbjct: 18 QALLPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTA 77
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS N P +AI F M G+ N+F L VLK D + G QVHA + G+
Sbjct: 78 YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC----VPDARLGAQVHAMAMATGFGS 133
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V+V ++L+ MY F MDDA +F +S +N VSWN L++ + + + A++ F EM
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 193
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G +PT F +S V A + ++E G+ VHA V++ G F N LVDMY K G +
Sbjct: 194 VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ A +F ++ DVVSWN++++GC +G + +M +G+ PN T +L AC
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
S AG D G+ M K + ++ V VD+ + LD A K
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 214/429 (49%), Gaps = 11/429 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + ++ R VHA ++ + D+ N +++ Y K G +D A +F++MP D+V+W
Sbjct: 212 CTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSW 271
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
ALISG N AI L QM GL PN FTLSS+LKA SGAGA D GRQ+H F
Sbjct: 272 NALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD--LGRQIHGFM 329
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + Y+G L+DMYA+ +DDA +F + ++ + NALI+G + ++AL
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ +EG + ++V + AS + + VHA +K G A V N L+D Y
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + DA +VF D+++ SM+T +Q G+ ++ F +MLR G+ P+
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC+ ++G+ A + K + V + G ++ A +P E
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-E 568
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDA 416
W A++G H + G A E + P HI + ++ + AG +++A
Sbjct: 569 RGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 417 ARARKMMKE 425
R MKE
Sbjct: 626 KRYFNSMKE 634
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 226/467 (48%), Gaps = 48/467 (10%)
Query: 5 LKKLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVT 60
LK + +AR+ VHA + + F +D+ + N ++ Y G +D+AR++F+E ++ V+
Sbjct: 110 LKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+S Y +NDQ +AI +F +M+ G++P +F S V+ A G+ + + GRQVHA
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC-TGSRNIEAGRQVHAMV 228
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ GYD +V+ ++L+DMY + ++D A +F + + VSWNALI+G +A+
Sbjct: 229 VRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+M G P F+ SS+ A + G+ + G+ +H +IK+ ++G LVDMY
Sbjct: 289 ELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK+ ++DA KVF+ + RD++ N++++GC+ G + F ++ + G+ N+ T
Sbjct: 349 AKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLA 408
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV------------------------- 335
VL + + + AL K G +AH V
Sbjct: 409 AVLKSTASLEAASTTRQVHALAVKIGF-IFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467
Query: 336 -------TFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG--- 382
+ + L + + A+K EM +EP V +LL AC E G
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 383 -AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A+ +R F D L YA G + DA A + E GV
Sbjct: 528 HAHLIKRQFMSDAFAGNA---LVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G +HA LK G + + L+ Y++ + A F + VSW++L+ ++
Sbjct: 23 GAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
A++ F M EG F+ V + G VHA + +G FV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFV 137
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
N LV MY G ++DA +VFN +R+ VSWN +++ ++ ++ F +M+ +G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
I P + F CV+ AC+ + ++ G+ A++ + G + + VD+ + G +D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 352 KFIREMPIEPTAAVWGALLGACRM----HKNVEL 381
+MP + W AL+ C + H+ +EL
Sbjct: 258 VIFEKMP-DSDVVSWNALISGCVLNGHDHRAIEL 290
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 5/176 (2%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ S T A+ +L G +HA ++KSG +A N L+ Y+K A + F+ +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGS--LASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
VSW+S++T + +GL ++ ++ F M G+ N+ VL A L G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GA 120
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A+ G + V + G G +D A + E E A W L+ A
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/570 (43%), Positives = 375/570 (65%), Gaps = 6/570 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + ++E + VH H++ + + + ++ ++ Y KC CL +AR++FDEMP K++V+
Sbjct: 99 ECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVS 158
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+IS YSQ A+ LF +MLR +PN FT +++L S G+ + GRQ+H+
Sbjct: 159 WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATIL-TSCYGSLGFETGRQIHSIA 217
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ +++VGSSLLDMYA+ ++ DA +F L ++ V+ A+I+G+A+ E+AL
Sbjct: 218 IKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEAL 277
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F ++ EG +Y+SV TAL+ +L GK VH+HV++SG + N+L+DMY
Sbjct: 278 KLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMY 337
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR--NGIAPNQVT 298
+K G++ A ++F+ + +R +SWN+ML G ++HG+ + + F K++R N + P+ +T
Sbjct: 338 SKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF-KLMREENKVKPDSIT 396
Query: 299 FLCVLTACSHAGLLDEGQGYFALM--KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+L VL+ CSH L D G F M K G+EP+ HY VDLLGRAG ++ A FI++
Sbjct: 397 YLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKK 456
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP PTAA+WG+LLG+CR+H +VE+G +++ EL+P ++G +++L+N+YASAG+ D
Sbjct: 457 MPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDM 516
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
R +M+E V KEP SWVE VH F A+D HP+R + KK +E+S K K+ GYV
Sbjct: 517 RNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYV 576
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD S VL D++++E L HSEKLALAF LI+TP G+TI + KN+R+C DCHS KF
Sbjct: 577 PDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFV 636
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++ R +I+RD NRFH+ G CSCGDYW
Sbjct: 637 SRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%)
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G E Y ++ S ++ +G+ VH H+IK+ ++ L+ +Y K + DA
Sbjct: 85 GREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 144
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
++F+ + +++VVSW +M++ +Q G + F +MLR+ PN TF +LT+C +
Sbjct: 145 REMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 204
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+ G+ ++ K E + +D+ ++G + A +P A +
Sbjct: 205 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 264
Query: 370 LGACRM 375
G +M
Sbjct: 265 SGYAQM 270
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/569 (43%), Positives = 364/569 (63%), Gaps = 9/569 (1%)
Query: 1 KCTHLK-KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
KC ++ +++AR+VH H+ + ++ + NT++N Y K G LDEAR LFDEMP +++V
Sbjct: 24 KCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVV 83
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WT +IS YS ++ A+ MLR G++PN +T SSVL+A RQ+H
Sbjct: 84 SWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLN----LRQLHGS 139
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK G + +V+V S+L+D Y++ + DA +F + + + V WN++I G A+ S+G++
Sbjct: 140 ILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDET 199
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L + M R F + +SV A LE G+ VH HV+K L+ + N L+DM
Sbjct: 200 LHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLI--LNNALLDM 257
Query: 240 YAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
Y K GS+EDA +F R++ ++DV+SW++M+ G AQ+G ++ FE M G PN +T
Sbjct: 258 YCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYIT 317
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL ACSHAGL+++G YF MK+H G++P HY +DLLGRAG LD A+K I EM
Sbjct: 318 ILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 377
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
EP A W LLGACR+HKNV+L YAA+ I +LDP D+G +ILL+NIYA++ + D A
Sbjct: 378 NHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVA 437
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R+ M+ GVKK+P CSW+E VH F+ D++HP+ I ++ ++ +++ ++GYVP
Sbjct: 438 EVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVP 497
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D++ VL + ++ E LQ HSEKLA+ F L+S P TIHI+KN+R+CGDCH K S
Sbjct: 498 DTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVS 557
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ R I++RD R+HHFR G CSCGDYW
Sbjct: 558 QLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ M R +YS + G+++Q + VH HV +G + F+ NTL++M
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G +++A +F+ + R+VVSW +M++ + L + + MLR G+ PN T+
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL AC GLL+ Q + +++K G+E + +D + G AL EM I
Sbjct: 121 SSVLRACD--GLLNLRQLHGSILKV-GLESDVFVRSALIDTYSKLGEQHDALNVFNEM-I 176
Query: 360 EPTAAVWGALLGA 372
VW +++G
Sbjct: 177 TGDLVVWNSIIGG 189
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/565 (43%), Positives = 371/565 (65%), Gaps = 7/565 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + VH + S +D+++ N+++N Y+K GC AR++F++M D+++W ++IS
Sbjct: 302 LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 361
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD-----DKFGRQVHAFCLK 122
+Q+ E ++ LF +L GLKP+ FTL+S+ A+ A A D+ G+Q+HA +K
Sbjct: 362 CAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQ-GKQIHAHAIK 420
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G+D +++V S +LDMY + M +A +F + + ++V+W ++I+G ++ALR
Sbjct: 421 AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+ M + P ++++++ A + +LEQG+ +HA+VIK FVG +LVDMYAK
Sbjct: 481 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 540
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G+IEDA ++F ++ R++ WN+ML G AQHG + V F+ M +GI P++V+F+ +
Sbjct: 541 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 600
Query: 303 LTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ACSHAGL E Y M +G+EPE HY VD LGRAGL+ A K I MP +
Sbjct: 601 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 660
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+A++ ALLGACR+ +VE G A R+F L+P DS ++LL+NIYA+A R +D ARK
Sbjct: 661 SASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 720
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMK VKK+P SW++ KN +H+FV +D +HPQ +I+ K E+ + I++ GYVPD+
Sbjct: 721 MMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEF 780
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + +E+E L HSEKLA+A+ LISTP +TI + KN+RVCGDCH+A K+ SKV E
Sbjct: 781 VLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFE 840
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD NRFHHFRDG CSCGDYW
Sbjct: 841 REIVLRDANRFHHFRDGVCSCGDYW 865
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 212/388 (54%), Gaps = 13/388 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L A VH + + + D+ + ++N Y+KCG + +AR LFD M +D+V W
Sbjct: 193 CLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLW 252
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFC 120
++ GY Q + A LFS+ R GL+P++F++ +L TDD + G+QVH
Sbjct: 253 NMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIA 312
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWF---LFTALESKNEVSWNALIAGHARKSEGE 177
+K G D +V V +SL++MY++ M A+F +F ++ + +SWN++I+ A+ S E
Sbjct: 313 VKSGLDSDVSVANSLVNMYSK---MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 369
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGS-----LEQGKWVHAHVIKSGGQLVAFV 232
+++ F ++L EG +P HF+ +S+ A A+ L+QGK +HAH IK+G V
Sbjct: 370 ESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV 429
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
+ ++DMY K G + +A VFN + D V+W SM++GC +G +R + +M ++ +
Sbjct: 430 NSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 489
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P++ TF ++ A S L++G+ A + K + + VD+ + G ++ A +
Sbjct: 490 MPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYR 549
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVE 380
++M + A+W A+L H N E
Sbjct: 550 LFKKMNVR-NIALWNAMLVGLAQHGNAE 576
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 213/463 (46%), Gaps = 52/463 (11%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY-- 68
+ HA I+ S D + N +L Y+KCG L AR++FD P +D+VTW A++ Y
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 69 ---SQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKY 123
S + + + LF ++LR L + TL+ VLK +G G VH + +K
Sbjct: 156 SVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG--VHGYAIKI 212
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +W+V+V +L+++Y++ +M DA LF + ++ V WN ++ G+ + ++A + F
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272
Query: 184 SEMLREGFEPTHFSYSSVFTAL--ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
SE R G P FS + A T LE GK VH +KSG V N+LV+MY+
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ----- 296
K G A +VFN + D++SWNSM++ CAQ L + +V F +L G+ P+
Sbjct: 333 KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVE---------------------------- 328
+T AC LLD+G+ A K G +
Sbjct: 393 ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNY 452
Query: 329 ---PEEAHYVTFVDLLGRAGLLDRALKF---IREMPIEPTAAVWGALLGACRMHKNVELG 382
P++ + + + G D+AL+ +R+ + P + L+ A +E G
Sbjct: 453 ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQG 512
Query: 383 AYAAERIFELD-PHDSGPHILLANIYASAGRLNDAARARKMMK 424
+ +LD D L ++YA G + DA R K M
Sbjct: 513 RQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
ST +L GK HA ++ SG F+ N L+ MY+K GS+ A +VF+ +RD+V+WN+
Sbjct: 89 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNA 148
Query: 267 ML----------TGCAQHGLGKATVRWFEKMLRNGI-APNQVTFLCVLTACSHAGLLDEG 315
+L G AQ GL ++LR + + ++T VL C ++G L
Sbjct: 149 ILGAYAASVDSNDGNAQEGLH------LFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+G K G+E + V++ + G + R + + + E +W +L
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRM-RDARLLFDWMRERDVVLWNMML 256
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/570 (46%), Positives = 363/570 (63%), Gaps = 10/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C R +H ++ + +D + +++ YAK LD+A K+FD M +D++ W
Sbjct: 220 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILW 279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG----AGATDDKFGRQVH 117
ALISG S + + A +F + + GL N+ TL++VLK++ A AT RQVH
Sbjct: 280 NALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASAT-----RQVH 334
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A K G+ ++ +V + L+D Y + + DA +F S + ++ ++I ++ GE
Sbjct: 335 ALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGE 394
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A++ F EMLR+G EP F SS+ A AS + EQGK VHAH+IK AF GN LV
Sbjct: 395 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 454
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
YAK GSIEDAE F+ L +R VVSW++M+ G AQHG GK + F +M+ GI PN +
Sbjct: 455 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 514
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T VL AC+HAGL+DE + YF MK+ G++ E HY +DLLGRAG LD A++ +
Sbjct: 515 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 574
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP + A+VWGALLGA R+HK+ ELG AAE++F L+P SG H+LLAN YAS+G N+
Sbjct: 575 MPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEV 634
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A+ RK+MK+S +KKEPA SWVE K+ VH F+ D +HP I+ K E+ + + + GY+
Sbjct: 635 AKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYI 694
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P+ L D+ E+E L HSE+LA+AFAL+STPPG+ I +KKN+R+C DCH AFKF
Sbjct: 695 PNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFI 754
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S +V REII+RD NRFHHFRDG CSCGDYW
Sbjct: 755 SNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 211/429 (49%), Gaps = 11/429 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + R VHA ++ ++ D+ N +++ Y K G +D A +F++MP D+V+W
Sbjct: 119 CTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSW 178
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
ALISG N AI L QM GL PN F LSS+LKA +GAGA D GRQ+H F
Sbjct: 179 NALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD--LGRQIHGFM 236
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + Y+G L+DMYA+ +DDA +F + ++ + WNALI+G + ++A
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + +EG + ++V + AS + + VHA K G A V N L+D Y
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 356
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + DA +VF D+++ SM+T +Q G+ ++ F +MLR G+ P+
Sbjct: 357 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 416
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC+ ++G+ A + K + V + G ++ A +P E
Sbjct: 417 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-E 475
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDA 416
W A++G H + G A E + P HI + ++ + AG +++A
Sbjct: 476 RGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 532
Query: 417 ARARKMMKE 425
R MKE
Sbjct: 533 KRYFNSMKE 541
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 226/467 (48%), Gaps = 48/467 (10%)
Query: 5 LKKLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
LK + +A++ VHA + + F +D+ + N ++ Y G +D+AR++FDE ++ V+
Sbjct: 17 LKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVS 76
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+S Y +NDQ +AI +F +M+ G++P +F S V+ A G+ + GRQVHA
Sbjct: 77 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC-TGSRNIDAGRQVHAMV 135
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ GY+ +V+ ++L+DMY + ++D A +F + + VSWNALI+G +A+
Sbjct: 136 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 195
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+M G P F SS+ A A G+ + G+ +H +IK+ ++G LVDMY
Sbjct: 196 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 255
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK+ ++DA KVF+ + RD++ WN++++GC+ G F + + G+ N+ T
Sbjct: 256 AKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLA 315
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV---------------------- 338
VL + + + AL +K G +AH V +
Sbjct: 316 AVLKSTASLEAASATRQVHALAEKIGF-IFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 374
Query: 339 -DLLGRAGLL---------DRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG--- 382
D++ ++ + A+K EM +EP V +LL AC E G
Sbjct: 375 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 434
Query: 383 -AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A+ +R F D L YA G + DA A + E GV
Sbjct: 435 HAHLIKRQFMSDAFAGNA---LVYTYAKCGSIEDAELAFSSLPERGV 478
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/566 (44%), Positives = 367/566 (64%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + +H IL D+ N +LN Y K L +A KLFDEMP ++ +++
Sbjct: 48 CIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISF 107
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI GY+++ + AI LF ++ R L PNQFT +SVL+A A G Q+H +
Sbjct: 108 VTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQAC-ATMEGLNLGNQIHCHVI 165
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V+V ++L+D+YA+ +M+++ LF +N+V+WN +I GH + +GEKALR
Sbjct: 166 KIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALR 225
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML + T +YSS A AS +LE G +H+ +K+ V N L+DMYA
Sbjct: 226 LFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYA 285
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI+DA VF+ + K+D VSWN+M++G + HGLG+ +R F+KM + P+++TF+
Sbjct: 286 KCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVG 345
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC++AGLLD+GQ YF ++++ HG+EP HY V LLGR G LD+A+K I E+P +
Sbjct: 346 VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQ 405
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P+ VW ALLGAC +H ++ELG +A+R+ E++P D H+LL+N+YA+A R ++ A R
Sbjct: 406 PSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVR 465
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK GVKKEP SW+E++ VH F D +HP+ +I+ + K K+ GY+P+ +
Sbjct: 466 KNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYN 525
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + +E+E L VHSE+LAL+F +I TP GS I I KN+R+C DCH+A K SKVV
Sbjct: 526 VVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVV 585
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD NRFHHF++G CSCGDYW
Sbjct: 586 QREIVVRDINRFHHFQEGLCSCGDYW 611
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/570 (46%), Positives = 363/570 (63%), Gaps = 10/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C R +H ++ + +D + +++ YAK LD+A K+FD M +D++ W
Sbjct: 313 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILW 372
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG----AGATDDKFGRQVH 117
ALISG S + + A +F + + GL N+ TL++VLK++ A AT RQVH
Sbjct: 373 NALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASAT-----RQVH 427
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A K G+ ++ +V + L+D Y + + DA +F S + ++ ++I ++ GE
Sbjct: 428 ALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGE 487
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A++ F EMLR+G EP F SS+ A AS + EQGK VHAH+IK AF GN LV
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
YAK GSIEDAE F+ L +R VVSW++M+ G AQHG GK + F +M+ GI PN +
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T VL AC+HAGL+DE + YF MK+ G++ E HY +DLLGRAG LD A++ +
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP + A+VWGALLGA R+HK+ ELG AAE++F L+P SG H+LLAN YAS+G N+
Sbjct: 668 MPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEV 727
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A+ RK+MK+S +KKEPA SWVE K+ VH F+ D +HP I+ K E+ + + + GY+
Sbjct: 728 AKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYI 787
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P+ L D+ E+E L HSE+LA+AFAL+STPPG+ I +KKN+R+C DCH AFKF
Sbjct: 788 PNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFI 847
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S +V REII+RD NRFHHFRDG CSCGDYW
Sbjct: 848 SNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 8/361 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA++L S F +++N +++ Y+KC AR++FDE+P V+W++L++ YS N
Sbjct: 26 LHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P +AI F M G+ N+F L VLK D + G QVHA + G+ +V+V +
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKC----VPDAQLGAQVHAMAMATGFGSDVFVAN 139
Query: 134 SLLDMYARFDQMDDAWFLFT-ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+L+ MY F MDDA +F A +N VSWN L++ + + + A++ F EM+ G +
Sbjct: 140 ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT F +S V A + +++ G+ VHA V++ G + F N LVDMY K G ++ A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 259
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F ++ DVVSWN++++GC +G + +M +G+ PN +L AC+ AG
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 319
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
D G+ M K + ++ V VD+ + LD A+K M +W AL+
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISG 378
Query: 373 C 373
C
Sbjct: 379 C 379
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 211/429 (49%), Gaps = 11/429 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + R VHA ++ ++ D+ N +++ Y K G +D A +F++MP D+V+W
Sbjct: 212 CTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSW 271
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
ALISG N AI L QM GL PN F LSS+LKA +GAGA D GRQ+H F
Sbjct: 272 NALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD--LGRQIHGFM 329
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + Y+G L+DMYA+ +DDA +F + ++ + WNALI+G + ++A
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 389
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + +EG + ++V + AS + + VHA K G A V N L+D Y
Sbjct: 390 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 449
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + DA +VF D+++ SM+T +Q G+ ++ F +MLR G+ P+
Sbjct: 450 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC+ ++G+ A + K + V + G ++ A +P E
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-E 568
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDA 416
W A++G H + G A E + P HI + ++ + AG +++A
Sbjct: 569 RGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 417 ARARKMMKE 425
R MKE
Sbjct: 626 KRYFNSMKE 634
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 226/467 (48%), Gaps = 48/467 (10%)
Query: 5 LKKLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
LK + +A++ VHA + + F +D+ + N ++ Y G +D+AR++FDE ++ V+
Sbjct: 110 LKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVS 169
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+S Y +NDQ +AI +F +M+ G++P +F S V+ A G+ + GRQVHA
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNAC-TGSRNIDAGRQVHAMV 228
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ GY+ +V+ ++L+DMY + ++D A +F + + VSWNALI+G +A+
Sbjct: 229 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+M G P F SS+ A A G+ + G+ +H +IK+ ++G LVDMY
Sbjct: 289 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK+ ++DA KVF+ + RD++ WN++++GC+ G F + + G+ N+ T
Sbjct: 349 AKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLA 408
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV---------------------- 338
VL + + + AL +K G +AH V +
Sbjct: 409 AVLKSTASLEAASATRQVHALAEKIGF-IFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 467
Query: 339 -DLLGRAGLL---------DRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG--- 382
D++ ++ + A+K EM +EP V +LL AC E G
Sbjct: 468 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 383 -AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A+ +R F D L YA G + DA A + E GV
Sbjct: 528 HAHLIKRQFMSDAFAGNA---LVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ S T A+ +L G +HA+++KSG +A + N L+ Y+K A +VF+ +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSG--FLASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
VSW+S++T + +GL ++ ++ F M G+ N+ VL A L G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GA 120
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A+ G + V + G G +D A + E E A W L+ A
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/570 (43%), Positives = 368/570 (64%), Gaps = 6/570 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + + ++E + VHAH++ + + + + ++ Y KC CL AR +FDEM +++V+
Sbjct: 19 ECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVS 78
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISGYSQ A+ LF QMLR +PN+FT ++VL +S G + + GRQ+H+
Sbjct: 79 WTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVL-SSCTGFSGFELGRQIHSHI 137
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K Y+ +++VGSSLLDMYA+ ++ +A +F L ++ VS A+I+G+A+ E+AL
Sbjct: 138 FKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEAL 197
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + REG + +Y+S+ TAL+ +L+ GK VH+HV++ + N+L+DMY
Sbjct: 198 ELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMY 257
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR--NGIAPNQVT 298
+K G++ A K+FN + R V+SWN+ML G ++HG G V+ F K++R N + P+ VT
Sbjct: 258 SKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLF-KLMREENKVKPDSVT 316
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA--HYVTFVDLLGRAGLLDRALKFIRE 356
FL VL+ CSH GL D+G F M G E E HY +DLLGRAG ++ A + I++
Sbjct: 317 FLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKK 376
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP EPTAA+WG+LLGACR+H N +G + R+ E++P ++G +++L+N+YASAGR D
Sbjct: 377 MPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDV 436
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
R++M E V KEP SW+E +H F A+D +HP+R + K RE+ K K+ GYV
Sbjct: 437 RNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYV 496
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD S VL D++++E L HSEKLALAF LIST G + + KN+R+C DCH+ KF
Sbjct: 497 PDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFV 556
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SKV R++ +RD NRFHH G CSCGDYW
Sbjct: 557 SKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M +G E Y+ + + ++ +G+ VHAH+IK+ ++ L+ +Y K
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ A VF+ + +R+VVSW +M++G +Q G + F +MLR+ PN+ TF VL++
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP----IEP 361
C+ + G+ + + K E + +D+ +AG + A +P +
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180
Query: 362 TAAVWG 367
TA + G
Sbjct: 181 TAIISG 186
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/566 (42%), Positives = 374/566 (66%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +H+ ++ F DI++QN +++ YA+CG + +AR LF++M KD+++W
Sbjct: 456 CVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISW 515
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G +++ A+ +F M + GLKPN+ T +S+L A + A D +GR++H +
Sbjct: 516 TAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD-WGRRIHQQVI 574
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + +V ++L++MY+ + DA +F + ++ V++NA+I G+A + G++AL+
Sbjct: 575 EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALK 634
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + EG +P +Y ++ A A++GSLE K +H+ V+K G +GN LV YA
Sbjct: 635 LFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYA 694
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS DA VF++++KR+V+SWN+++ GCAQHG G+ ++ FE+M GI P+ VTF+
Sbjct: 695 KCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVS 754
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSHAGLL+EG+ YF M + G+ P HY VDLLGRAG LD I+ MP +
Sbjct: 755 LLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQ 814
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+WGALLGACR+H NV + AAE +LDP ++ ++ L+++YA+AG + AA+ R
Sbjct: 815 ANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLR 874
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M++ GV KEP SW+E + +H FVA D +HP+ I+ + +++ +K GYVPD+
Sbjct: 875 KLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTR 934
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V+ D+ E+E + HSE+LA+A+ LIST PG+ I I KN+RVC DCH+A KF +K+V
Sbjct: 935 SVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIV 994
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+ RD NRFHHF+DG CSCGDYW
Sbjct: 995 DREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 226/429 (52%), Gaps = 7/429 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R +H + + D+ + N ILN YAKCG + EAR++FD+M K +V+W
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSW 313
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
T +I GY+ E A +F +M + G+ PN+ T +VL A SG A K+G+ VH+
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL--KWGKTVHSHI 371
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L G++ ++ VG++L+ MYA+ D +F L +++ ++WN +I G A E+A
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ +M REG P +Y + A + +L G+ +H+ V+K G V N L+ MY
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMY 491
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ GSI+DA +FN+++++D++SW +M+ G A+ GLG + F+ M + G+ PN+VT+
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYT 551
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS LD G+ + + G+ + T V++ G + A + M
Sbjct: 552 SILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR 611
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDAAR 418
A + A++G H + +R+ E L P D +I + N A++G L A
Sbjct: 612 DIVA-YNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAKE 669
Query: 419 ARKMMKESG 427
++ + G
Sbjct: 670 IHSLVLKDG 678
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 228/468 (48%), Gaps = 44/468 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDM 58
+C +K L R VH HI+ D N ++N Y +CG ++EAR++++++ + +
Sbjct: 150 RCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTV 209
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+W A++ GY Q E A+ L +M + GL + T +L +S + + GR++H
Sbjct: 210 HSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL-SSCKSPSALECGREIHV 268
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K ++V V + +L+MYA+ + +A +F +E+K+ VSW +I G+A E
Sbjct: 269 EAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEI 328
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A F +M +EG P +Y +V A + +L+ GK VH+H++ +G + VG LV
Sbjct: 329 AFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVK 388
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK GS +D +VF +L+ RD+++WN+M+ G A+ G + + +M R G+ PN++T
Sbjct: 389 MYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHG-------------------------------V 327
++ +L AC + L G+ + + K G V
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMV 508
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAY 384
+ + + L ++GL AL ++M ++P + ++L AC ++ G
Sbjct: 509 RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRR 568
Query: 385 AAERIFE----LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+++ E D H + L N+Y+ G + DA + M + +
Sbjct: 569 IHQQVIEAGLATDAHVANT---LVNMYSMCGSVKDARQVFDRMTQRDI 613
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 149 WFLFTALESKNEVSWNALIAGHARKSE-----GEKALRTFSEMLREGFEPTHFSYSSVFT 203
WF + N S + H K E ++A+ + ++G Y +
Sbjct: 90 WFNSNGIRYFNGRSKANKLHSHTYKDERTITGKDRAMDVVQYLQQQGARVNSCDYMKMLK 149
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDV 261
L G+ VH H+I+ L + N L++MY + GSIE+A +V+N+L +R V
Sbjct: 150 RCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTV 209
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
SWN+M+ G Q+G + ++ +M ++G+A + T + +L++C L+ G+
Sbjct: 210 HSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGR 264
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/567 (44%), Positives = 363/567 (64%), Gaps = 4/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK + VHA I ++D+ + +L Y KCG ++EAR++FD + D+++W
Sbjct: 139 CASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISW 198
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
T +I Y+Q+ + A L QM + G KPN T S+L A + GA K+ ++VH
Sbjct: 199 TVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL--KWVKRVHRHA 256
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L G + +V VG++L+ MYA+ +DDA +F ++ ++ VSWN +I A G +A
Sbjct: 257 LDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAY 316
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M EG +P + S+ A AS G+LE K +H H + SG ++ VG LV MY
Sbjct: 317 DLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMY 376
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+KSGSI+DA VF+R+ R+VVSWN+M++G AQHGLG+ + F +M +G+ P++VTF+
Sbjct: 377 SKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFV 436
Query: 301 CVLTACSHAGLLDEGQG-YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSHAGL+DEG+ Y A+ + +G+EP+ +H VDLLGRAG L A FI M +
Sbjct: 437 AVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAV 496
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A WGALLG+CR + NVELG A+ +LDP ++ ++LL+NIYA AG+ + +
Sbjct: 497 DPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWV 556
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R MM+E G++KEP SW+E N +H F+ D +HP+ I++ ++ EKIK GY+PD+
Sbjct: 557 RTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDT 616
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL + +++E + HSEKLA+ + L+ TPPG+ I + KN+RVC DCH A K SKV
Sbjct: 617 RLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKV 676
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHHF+DG CSCGDYW
Sbjct: 677 EGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 216/400 (54%), Gaps = 7/400 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C K L A+ VH I+ S + + + N +L+ Y +CG L EAR +FD + K +
Sbjct: 37 RCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGAS 96
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+I+GY ++ E+A+ LF +M G++PN T +LKA A + K+G++VHA C
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKAC-ASLSALKWGKEVHA-C 154
Query: 121 LKY-GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+++ G + +V VG++LL MY + +++A +F L + + +SW +I +A+ G++A
Sbjct: 155 IRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEA 214
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R +M +EGF+P +Y S+ A AS G+L+ K VH H + +G +L VG LV M
Sbjct: 215 YRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQM 274
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAKSGSI+DA VF+R+ RDVVSWN M+ A+HG G F +M G P+ + F
Sbjct: 275 YAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L +L AC+ AG L+ + G+E + V + ++G +D A M +
Sbjct: 335 LSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV 394
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+ W A++ H LG A E + H P
Sbjct: 395 RNVVS-WNAMISGLAQHG---LGQDALEVFRRMTAHGVKP 430
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 9/357 (2%)
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
AI++ L+ GL + F VLK D +QVH +K + N +V ++LL
Sbjct: 12 AIVVLMNRLQRGLITDSFMYVEVLKRC-LKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
+Y ++ +A +F AL K+ SWNA+IAG+ E A+R F EM EG +P
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y + A AS +L+ GK VHA + G + VG L+ MY K GSI +A ++F+ L
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+ D++SW M+ AQ G GK R +M + G PN +T++ +L AC+ G L +
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
G+E + V + ++G +D A M + + W ++GA H
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS-WNVMIGAFAEH 309
Query: 377 KNVELGAYAAERIFELDPHDSGPHILL----ANIYASAGRLNDAARARKMMKESGVK 429
G A + ++ P ++ N ASAG L + + +SG++
Sbjct: 310 GR---GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A+ L+ G F Y V L K VH +IKS + A V N L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+Y + G +++A VF+ L+K+ SWN+M+ G +H + +R F +M G+ PN
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T++ +L AC+ L G+ A ++ G+E + + + G+ G ++ A + +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP----HILLANIYASAGRL 413
+ W ++GA N G A + +++ P ++ + N AS G L
Sbjct: 191 -MNHDIISWTVMIGAYAQSGN---GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246
Query: 414 NDAARARKMMKESGVK 429
R + ++G++
Sbjct: 247 KWVKRVHRHALDAGLE 262
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/570 (42%), Positives = 373/570 (65%), Gaps = 6/570 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + ++E + VH H++ + + + ++ ++ Y KC CL +AR +FDEMP +++V+
Sbjct: 71 ECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVS 130
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+IS YSQ A+ LF +MLR +PN FT +++L S G+ + GRQ+H+
Sbjct: 131 WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATIL-TSCYGSLGFETGRQIHSIA 189
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ +++VGSSLLDMYA+ ++ DA +F L ++ V+ A+I+G+A+ E+AL
Sbjct: 190 IKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEAL 249
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F ++ EG +Y+SV TAL+ +L GK VH+HV++SG + N+L+DMY
Sbjct: 250 KLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMY 309
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR--NGIAPNQVT 298
+K G++ A ++F+ + +R +SWN+ML G ++HG+ + + F K++R N + P+ +T
Sbjct: 310 SKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF-KLMREENKVKPDSIT 368
Query: 299 FLCVLTACSHAGLLDEGQGYFALM--KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+L VL+ CSH L D G F M K G+EP+ HY VDLLGRAG ++ A FI++
Sbjct: 369 YLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKK 428
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP PTAA+WG+LLG+CR+H +VE+G +++ EL+P ++G +++L+N+YASAG+ D
Sbjct: 429 MPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDM 488
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
R +M+E V KEP SWVE VH F A+D HP+R + K +E+S K K+ GYV
Sbjct: 489 RNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYV 548
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD S VL D++++E L HSEKLALAF LI+TP G+TI + KN+R+C DCHS KF
Sbjct: 549 PDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFV 608
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++ R +I+RD NRFH+ G CSCGDYW
Sbjct: 609 SRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%)
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G E Y S+ S ++ +G+ VH H+IK+ ++ L+ +Y K + DA
Sbjct: 57 GREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 116
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+F+ + +R+VVSW +M++ +Q G + F +MLR+ PN TF +LT+C +
Sbjct: 117 RGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 176
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+ G+ ++ K E + +D+ ++G + A +P A +
Sbjct: 177 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 236
Query: 370 LGACRM 375
G +M
Sbjct: 237 SGYAQM 242
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/557 (44%), Positives = 362/557 (64%), Gaps = 2/557 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H+ ++ +D+ +++ Y+KC +D+AR+ +D MP KD++ W ALISGYSQ
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 362
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+A+ LFS+M + NQ TLS+VLK S A K +Q+H +K G + Y
Sbjct: 363 CGDHLDAVSLFSKMFSEDIDFNQTTLSTVLK-SVASLQAIKVCKQIHTISIKSGIYSDFY 421
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V +SLLD Y + + +D+A +F ++ V++ ++I +++ +GE+AL+ + +M
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P F SS+ A A+ + EQGK +H H IK G F N+LV+MYAK GSIEDA+
Sbjct: 482 IKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDAD 541
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+ F+ + R +VSW++M+ G AQHG GK +R F +MLR+G+ PN +T + VL AC+HAG
Sbjct: 542 RAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAG 601
Query: 311 LLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L++EG+ YF M+ G++P + HY +DLLGR+G L+ A++ + +P E VWGAL
Sbjct: 602 LVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGAL 661
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
LGA R+HKN+ELG AA+ +F+L+P SG H+LLANIYASAG + A+ RK MK+S VK
Sbjct: 662 LGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVK 721
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEP SW+E K+ V+ F+ D +H + I+ K ++ + + + GY + D+
Sbjct: 722 KEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKS 781
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+E L HSEKLA+AF LI+TPPG I +KKN+R+C DCH+ FKF K+V REIIVRD
Sbjct: 782 EKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDI 841
Query: 550 NRFHHFRDGFCSCGDYW 566
NRFHHF+DG CSCGDYW
Sbjct: 842 NRFHHFKDGSCSCGDYW 858
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 193/357 (54%), Gaps = 2/357 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HAH++ F D +++N ++ Y+KC ARKL DE D+V+W++L+SGY QN
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+++F++M LG+K N+FT SVLKA D GR+VH + G++ + +V +
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSM-KRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ MYA+ +DD+ LF + +N VSWNAL + + + +A+ F EM+R G P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
FS S + A A + G+ +H ++K G L F N LVDMY+K+G IE A VF
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ DVVSWN+++ GC H + ++M +G PN T L AC+ G +
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ + + K + V VD+ + ++D A + MP + A W AL+
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA-WNALI 357
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 222/465 (47%), Gaps = 42/465 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L R VH + + F++D + NT++ YAKCG LD++R+LF + +++V+W
Sbjct: 92 CSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSW 151
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL S Y Q++ A+ LF +M+R G+ PN+F++S +L A AG + GR++H L
Sbjct: 152 NALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNAC-AGLQEGDLGRKIHGLML 210
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D + + ++L+DMY++ +++ A +F + + VSWNA+IAG + AL
Sbjct: 211 KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALM 270
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EM G P F+ SS A A+ G E G+ +H+ +IK F LVDMY+
Sbjct: 271 LLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYS 330
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K ++DA + ++ + K+D+++WN++++G +Q G V F KM I NQ T
Sbjct: 331 KCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLST 390
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP--- 358
VL + + + + + K G+ + + +D G+ +D A K E
Sbjct: 391 VLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWED 450
Query: 359 -------------------------------IEPTAAVWGALLGAC----RMHKNVELGA 383
I+P + +LL AC + +L
Sbjct: 451 LVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHV 510
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+A + F D S L N+YA G + DA RA + G+
Sbjct: 511 HAIKFGFMCDIFASNS---LVNMYAKCGSIEDADRAFSEIPNRGI 552
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 143/262 (54%), Gaps = 1/262 (0%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
++HA +K+G+ + + + L+ +Y++ + A L + VSW++L++G+ +
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
E+AL F+EM G + F++ SV A + L G+ VH + +G + FV N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
TLV MYAK G ++D+ ++F +++R+VVSWN++ + Q L V F++M+R+GI P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N+ + +L AC+ D G+ LM K G++ ++ VD+ +AG ++ A+
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 355 REMPIEPTAAVWGALLGACRMH 376
+++ P W A++ C +H
Sbjct: 242 QDIA-HPDVVSWNAIIAGCVLH 262
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 5/207 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L ++ + +H H + F DI N+++N YAKCG +++A + F E+P + +V+W
Sbjct: 496 CANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSW 555
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I GY+Q+ + A+ LF+QMLR G+ PN TL SVL A ++ + +
Sbjct: 556 SAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEV 615
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAG---HARKSEGE 177
+G + ++D+ R ++++A L ++ + + W AL+ H G+
Sbjct: 616 MFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQ 675
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTA 204
KA + ++ E TH ++++ +
Sbjct: 676 KAAKMLFDLEPEK-SGTHVLLANIYAS 701
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/557 (47%), Positives = 365/557 (65%), Gaps = 4/557 (0%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H ++ + +D + +++ YAK G LD+A+K+FD +P +D+V W ALISG S
Sbjct: 323 RQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHG 382
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVY 130
Q A+ LF +M + G N+ TL++VLK++ + A D RQVHA K G+ + +
Sbjct: 383 AQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDT--RQVHALAEKLGFLSDSH 440
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V + L+D Y + D ++ A+ +F S + +++ ++I ++ GE A++ F EMLR+G
Sbjct: 441 VVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 500
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P F SS+ A AS + EQGK VHAH+IK F GN LV YAK GSIEDA+
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDAD 560
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
F+ L ++ VVSW++M+ G AQHG GK + F +M+ I+PN +T VL AC+HAG
Sbjct: 561 LAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620
Query: 311 LLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L+DE + YF MK+ G+E E HY +DLLGRAG LD A++ + MP + AAVWGAL
Sbjct: 621 LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L A R+H++ ELG AAE++F L+P SG H+LLAN YASAG +D A+ RK+MK+S VK
Sbjct: 681 LAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVK 740
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEPA SWVE K+ VH F+ D +HP+ I+ K E+ + + + GYVP+ L D+
Sbjct: 741 KEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKN 800
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+E L HSE+LA+AFALISTP G+ I +KKN+R+C DCH+AFKF S +V REII+RD
Sbjct: 801 EKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDI 860
Query: 550 NRFHHFRDGFCSCGDYW 566
NRFHHFRDG CSC DYW
Sbjct: 861 NRFHHFRDGACSCRDYW 877
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 194/369 (52%), Gaps = 8/369 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + +HAH+L S +N +L+ Y+KC AR++FDE+P V+W++L+
Sbjct: 18 QSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLV 75
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ YS N P +A+ F M ++ N+F L VLK A D FG Q+HA + G
Sbjct: 76 TAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKC----APDAGFGTQLHALAMATGL 131
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFT-ALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+++V ++L+ MY F +D+A +F A +N VSWN L++ + + A++ F
Sbjct: 132 GGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFG 191
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM+ G +P F +S V A + LE G+ VHA VI++G F N LVDMY+K G
Sbjct: 192 EMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLG 251
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
I A VF ++ + DVVSWN+ ++GC HG + + +M +G+ PN T +L
Sbjct: 252 DIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILK 311
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+ +G + G+ M K + + VD+ + GLLD A K +P +
Sbjct: 312 ACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLV 370
Query: 365 VWGALLGAC 373
+W AL+ C
Sbjct: 371 LWNALISGC 379
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 220/428 (51%), Gaps = 9/428 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L+ R VHA ++ + + D+ N +++ Y+K G + A +F ++P D+V+W
Sbjct: 212 CTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSW 271
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A ISG + ++A+ L QM GL PN FTLSS+LKA +G+GA + GRQ+H F
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFN--LGRQIHGFM 329
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + Y+ L+DMYA+ +DDA +F + ++ V WNALI+G + ++ +AL
Sbjct: 330 VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEAL 389
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M +EGF+ + ++V + AS ++ + VHA K G + V N L+D Y
Sbjct: 390 SLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSY 449
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + A +VF + D++++ SM+T +Q G+ ++ F +MLR G+ P+
Sbjct: 450 WKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLS 509
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC+ ++G+ A + K + V + G ++ A +P E
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP-E 568
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS---AGRLNDAA 417
W A++G H + + R+ +D H S HI + ++ + AG +++A
Sbjct: 569 KGVVSWSAMIGGLAQHGHGKRALDVFHRM--VDEHISPNHITMTSVLCACNHAGLVDEAK 626
Query: 418 RARKMMKE 425
R MKE
Sbjct: 627 RYFNSMKE 634
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 218/454 (48%), Gaps = 43/454 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVTWTALISGYSQND 72
+HA + + DI + N ++ Y G +DEAR +FDE ++ V+W L+S Y +ND
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ +A+ +F +M+ G++PN+F S V+ A G+ D + GR+VHA ++ GYD +V+
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNAC-TGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++L+DMY++ + A +F + + VSWNA I+G + AL +M G
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P F+ SS+ A A +G+ G+ +H ++K+ ++ LVDMYAK G ++DA+KV
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ + +RD+V WN++++GC+ + F +M + G N+ T VL + + +
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420
Query: 313 DEGQGYFALMKKHGVEPE------------------------EAH-------YVTFVDLL 341
+ + AL +K G + E H + + + L
Sbjct: 421 SDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITAL 480
Query: 342 GRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG----AYAAERIFELDP 394
+ + A+K EM ++P V +LL AC E G A+ +R F D
Sbjct: 481 SQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDV 540
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
L YA G + DA A + E GV
Sbjct: 541 FAGNA---LVYTYAKCGSIEDADLAFSGLPEKGV 571
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ + VHAH++ F +D+ N ++ YAKCG +++A F +P K +V+W
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSW 574
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I G +Q+ + A+ +F +M+ + PN T++SVL A D+ R ++
Sbjct: 575 SAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIA 168
+G + + ++D+ R ++DDA L ++ N W AL+A
Sbjct: 635 MFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLA 682
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 5/172 (2%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ T A+T SL QG +HAH++KSG L A N L+ Y+K A +VF+ +
Sbjct: 10 LLTRYAATQSLLQGAHIHAHLLKSG--LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPC 67
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
VSW+S++T + + + + + F M + N+ VL AG G A
Sbjct: 68 HVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHA 124
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
L G+ + V + G G +D A E E W L+ A
Sbjct: 125 LAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/569 (42%), Positives = 369/569 (64%), Gaps = 6/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+E + VHAH++ + + ++ +L Y KC CL++ARK+ DEMP K++V+W
Sbjct: 61 CLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 120
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+IS YSQ A+ +F++M+R KPN+FT ++VL S A+ G+Q+H +
Sbjct: 121 TAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVL-TSCIRASGLALGKQIHGLIV 179
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+ YD +++VGSSLLDMYA+ Q+++A +F L ++ VS A+IAG+A+ E+AL
Sbjct: 180 KWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 239
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + EG P + +Y+S+ TAL+ L+ GK H HV++ A + N+L+DMY+
Sbjct: 240 MFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 299
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQVTF 299
K G++ A+++F+ + +R +SWN+ML G ++HGLG+ + F +++R+ + P+ VT
Sbjct: 300 KCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTL 358
Query: 300 LCVLTACSHAGLLDEGQGYFALM--KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL+ CSH + D G + M ++G++P+ HY VD+LGRAG +D A +FI+ M
Sbjct: 359 LAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRM 418
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P +PTA V G+LLGACR+H +V++G Y R+ E++P ++G +++L+N+YASAGR D
Sbjct: 419 PSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVN 478
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R MM + V KEP SW++ + +H F AND HP+R + K +EIS K+KQ GYVP
Sbjct: 479 NVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVP 538
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D S VL D++++E L HSEKLAL F LI+T G I + KN+R+C DCH+ K S
Sbjct: 539 DISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFS 598
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KV ERE+ +RD NRFH G CSCGDYW
Sbjct: 599 KVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM+ G E Y ++ A +L +G+ VHAH+IK+ ++ L+ Y K
Sbjct: 41 EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 100
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+EDA KV + + +++VVSW +M++ +Q G + F +M+R+ PN+ TF VLT
Sbjct: 101 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLT 160
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+C A L G+ L+ K + + +D+ +AG ++ A + +P
Sbjct: 161 SCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/566 (43%), Positives = 364/566 (64%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L+ VH I+ D+ N ++N Y+K +D RK+F+ MP KD+V++
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSY 174
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+Q+ E+A+ + +M LKP+ FTLSSVL + D G+++H + +
Sbjct: 175 NTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIF-SEYVDVLKGKEIHGYVI 233
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D +VY+GSSL+DMYA+ +++D+ +F+ L ++ +SWN+L+AG+ + +ALR
Sbjct: 234 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALR 293
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ P ++SSV A A +L GK +H +V++ G F+ + LVDMY+
Sbjct: 294 LFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYS 353
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+I+ A K+F+R+ D VSW +++ G A HG G V FE+M R G+ PNQV F+
Sbjct: 354 KCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 413
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH GL+DE GYF M K +G+ E HY DLLGRAG L+ A FI +M +E
Sbjct: 414 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVE 473
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT +VW LL +C +HKN+EL AE+IF +D + G ++L+ N+YAS GR + A+ R
Sbjct: 474 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLR 533
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+++ G++K+PACSW+E KN H FV+ D +HP I++ + + E++++ GYV D+S
Sbjct: 534 LRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTS 593
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++ + L HSE+LA+AF +I+T PG+TI + KNIR+C DCH A KF SK+
Sbjct: 594 GVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKIT 653
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREIIVRD +RFHHF G CSCGDYW
Sbjct: 654 EREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 188/374 (50%), Gaps = 3/374 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T +K +A+ +HA + + + + + +++ Y L EA +F + ++ W
Sbjct: 16 TRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLVFKTLESPPVLAWK 74
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++I ++ A+ F +M G P+ SVLK S D +FG VH F ++
Sbjct: 75 SVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLK-SCTMMMDLRFGESVHGFIVR 133
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G D ++Y G++L++MY++ +D +F + K+ VS+N +IAG+A+ E ALR
Sbjct: 134 LGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRM 193
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
EM +P F+ SSV + + +GK +H +VI+ G ++G++LVDMYAK
Sbjct: 194 VREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 253
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
S IED+E+VF+ L +RD +SWNS++ G Q+G +R F +M+ + P V F V
Sbjct: 254 SARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSV 313
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ AC+H L G+ + + G VD+ + G + A K M +
Sbjct: 314 IPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDE 373
Query: 363 AAVWGALLGACRMH 376
+ W A++ +H
Sbjct: 374 VS-WTAIIMGHALH 386
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/566 (43%), Positives = 365/566 (64%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH +++ ++ + +++ Y K G +D+A ++F+EMP D++ W
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPW 315
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+ Y+Q++Q E AI +F +M R + PNQFTL+S+L+A A D + G Q+H +
Sbjct: 316 SFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQAC-ASLVDLQLGNQIHCHVV 374
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D NV+V ++L+DMYA+ +M+++ LF+ + +VSWN +I G+ + GEKAL
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML + T +YSSV A A +LE G +H+ +K+ VGN L+DMYA
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA 494
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+I+DA VF+ L + D VSWN+M++G + HGL ++ FE ML P++VTF+
Sbjct: 495 KCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVG 554
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACS+AGLLD GQ YF ++++++ +EP HY V LLGR+G LD+A K + E+P E
Sbjct: 555 ILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFE 614
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P+ VW ALL AC +H +VELG +A+R+ E++P D H+LL+NIYA+A R + A R
Sbjct: 615 PSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIR 674
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK G++KEP SW+E + VH F D +HP +I+ ++ K + GYVPD S
Sbjct: 675 TSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFS 734
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + ++E +L VHSE+LALA+ LI TP S + I KN+R+C DCH+A K SK+V
Sbjct: 735 SVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIV 794
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+II+RD NRFHHF +G CSCGDYW
Sbjct: 795 QRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 2/360 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ +H I+ D+ N +LN Y K L +A KLFDEMP ++ V++ LI GYSQ
Sbjct: 63 GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQ 122
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ AI LFS++ G + N F S+VLK A K G VHA K G+D + +
Sbjct: 123 CLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLL-VSAEWAKLGFSVHACVYKLGFDSDAF 181
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
VG++L+D Y+ + A +F A+E K+ VSW ++A + E++L+ FS M G
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG 241
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F+P +F+++SV A GK VH K+ FVG L+D+Y KSG ++DA
Sbjct: 242 FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+VF + K DV+ W+ M+ AQ + + F +M R + PNQ T +L AC+
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L G + K G++ +D+ + G ++ +L+ E P T W ++
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP-NCTDVSWNTVI 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
E + Y S+ + G GK++H +IK G L F N L++ Y K S+ DA K
Sbjct: 41 EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+ + R+ VS+ +++ G +Q + F ++ G N F VL A
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
G A + K G + + +D G
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCG 194
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/566 (42%), Positives = 368/566 (65%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L L +H ++ S F+ ++ + + +++ YAK G LD AR + + +D+V+W
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+GY+Q+D A+ LF +M G++ + SS + A AG G+Q+HA
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC-AGIQALNQGQQIHAQSY 543
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY ++ +G++L+ +YAR + DA+ F +++K+ +SWNALI+G A+ E+AL+
Sbjct: 544 ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQ 603
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M + G E F++ S +A A+T +++QGK +HA +IK+G N L+ +Y+
Sbjct: 604 VFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYS 663
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA++ F + +++VVSWN+M+TG +QHG G V FE+M + G+ PN VTF+
Sbjct: 664 KCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVG 723
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL++EG YF ++ K+HG+ P+ HYV VDLLGRA LL A +FI EMPIE
Sbjct: 724 VLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIE 783
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W LL AC +HKN+E+G +AA + EL+P DS ++LL+N+YA +G+ + R R
Sbjct: 784 PDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTR 843
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MMK+ GVKKEP SW+E KN++H F D HP I++ +++E+ +IGYV D
Sbjct: 844 QMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRY 903
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
++L+ +Q++++ +HSEKLA+AF L+S I + KN+RVC DCH+ KF SK+
Sbjct: 904 NLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKIS 963
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R I+VRD RFHHF G CSC DYW
Sbjct: 964 NRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 193/363 (53%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA I+ F + + N +++ Y+K G +D A+ +F+ + +KD V+W A+ISG SQN +
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ AI+LF QM + + P + SSVL A K G Q+H F +K+G +V +
Sbjct: 194 EDEAILLFCQMHKSAVIPTPYVFSSVLSAC-TKIELFKLGEQLHGFIVKWGLSSETFVCN 252
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ +Y+R+ + A +F+ + ++ +S+N+LI+G A++ ++AL+ F +M + +P
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKP 312
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ +A AS G+ +GK +H++VIK G + +L+D+Y K IE A + F
Sbjct: 313 DCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF 372
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+VV WN ML Q G + F +M G+ PNQ T+ +L C+ G LD
Sbjct: 373 LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALD 432
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ + K G + +D+ + G LD A ++ + E + W A++
Sbjct: 433 LGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAMIAGY 491
Query: 374 RMH 376
H
Sbjct: 492 TQH 494
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 180/344 (52%), Gaps = 1/344 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT ++ K +H I+ ++ + N ++ Y++ G L A ++F +M +D +++
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY 282
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LISG +Q + A+ LF +M +KP+ T++S+L A + K G+Q+H++ +
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK-GKQLHSYVI 341
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ + SLLD+Y + ++ A F E++N V WN ++ + + ++
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYW 401
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M EG P ++Y S+ S G+L+ G+ +H VIKSG Q +V + L+DMYA
Sbjct: 402 IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA 461
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A + RL + DVVSW +M+ G QH L ++ F++M GI + + F
Sbjct: 462 KHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSS 521
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
++AC+ L++GQ A G + + V L R G
Sbjct: 522 AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCG 565
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 257/555 (46%), Gaps = 61/555 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L +A+ +HA I S F + + + +++ Y G +D A KLFD++P ++ W
Sbjct: 20 CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISG + LFS M+ + P++ T +SVL+A G + Q+HA +
Sbjct: 80 NKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKII 139
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+G+ + V + L+D+Y++ +D A +F L K+ VSW A+I+G ++ ++A+
Sbjct: 140 HHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAIL 199
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + PT + +SSV +A + G+ +H ++K G FV N LV +Y+
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G++ AE++F+++ +RD +S+NS+++G AQ G ++ FEKM + + P+ VT
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319
Query: 302 VLTACSHAG--------------------LLDEGQGYFALMKKHGVEPEEAHYVT----- 336
+L+AC+ G L+ EG +K +E +++T
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 337 ------FVDLLGRAGLLDRALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAE 387
+ G+ G L + +M IE P + ++L C ++LG
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 388 RI----FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
++ F+ + + +L ++YA G L+ A + ++E E SW
Sbjct: 440 QVIKSGFQFNVYVCS---VLIDMYAKHGELDTARGILQRLRE-----EDVVSWTA----- 486
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH----- 498
+A H A K ++E+ + + + SS + + A Q Q+H
Sbjct: 487 --MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI 544
Query: 499 ---SEKLALAFALIS 510
SE L++ AL+S
Sbjct: 545 SGYSEDLSIGNALVS 559
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 35/232 (15%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M G +Y +F ++GSL K +HA + KSG +G+ L+D+Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+++A K+F+ + +V WN +++G L + F M+ + P++ TF VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 306 CS------------HAGLLDEGQG--------YFALMKKHG------------VEPEEAH 333
CS HA ++ G G L K+G +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 334 YVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG 382
+V + L + G D A+ +M + PT V+ ++L AC + +LG
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/557 (47%), Positives = 362/557 (64%), Gaps = 4/557 (0%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H ++ + +D + +++ YAK G LD+ARK+F+ +P KD++ W ALISG S
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVY 130
++ LF +M + G N+ TL++VLK++ + A D QVHA K G+ + +
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT--TQVHALAEKIGFLSDSH 442
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V + L+D Y + + + A +F S N +++ ++I ++ GE A++ F EMLR+G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP F SS+ A AS + EQGK VHAH+IK F GN LV YAK GSIEDA+
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
F+ L + VVSW++M+ G AQHG GK + F +M+ IAPN +T VL AC+HAG
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622
Query: 311 LLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L+DE +GYF+ MK+ G++ E HY +DLLGRAG LD A++ + MP E AAVWGAL
Sbjct: 623 LVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGAL 682
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L A R+H++ ELG AAE++F L+P SG H+LLAN YASAG ++ A+ RK+MK+S VK
Sbjct: 683 LAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVK 742
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEPA SWVE K+ VH F+ D +HP+ I+ K E+ + + + GYVP+ L D+
Sbjct: 743 KEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKS 802
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+E L HSE+LA+AFALISTP G+ I +KKN+R+C DCH AFKF SK+V REII+RD
Sbjct: 803 EKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDI 862
Query: 550 NRFHHFRDGFCSCGDYW 566
NRFHHF DG CSCGDYW
Sbjct: 863 NRFHHFSDGACSCGDYW 879
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 187/363 (51%), Gaps = 10/363 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HAH+L S + A +N +L+ Y+KC AR++FDE P V+W++L++ YS N
Sbjct: 26 IHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNAL 83
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P A+ F M G++ N+F L VLK A D G QVHA + G +++V +
Sbjct: 84 PREALAAFRAMRARGVRCNEFALPIVLKC----APDAGLGVQVHAVAVSTGLSGDIFVAN 139
Query: 134 SLLDMYARFDQMDDAWFLFT-ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+L+ MY F +D+A +F A +N VSWN +++ + A+ F EM+ G
Sbjct: 140 ALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVR 199
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P F +S V A + LE G+ VHA V+++G F N LVDMY+K G I A V
Sbjct: 200 PNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALV 259
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL--TACSHAG 310
F ++ K DVVSWN+ ++GC HG + + +M +G+ PN T +L A + AG
Sbjct: 260 FGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAG 319
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ M K + ++ V VD+ + GLLD A K +P +W AL+
Sbjct: 320 AFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNALI 378
Query: 371 GAC 373
C
Sbjct: 379 SGC 381
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 209/428 (48%), Gaps = 7/428 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L+ R VHA ++ + + D+ N +++ Y+K G + A +F ++P D+V+W
Sbjct: 212 CTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSW 271
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-RQVHAFC 120
A ISG + ++A+ L QM GL PN FTLSS+LKA RQ+H F
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFM 331
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + Y+G +L+DMYA++ +DDA +F + K+ + WNALI+G + ++L
Sbjct: 332 IKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESL 391
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M +EG + + ++V + AS ++ VHA K G + V N L+D Y
Sbjct: 392 SLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSY 451
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + A KVF +++++ SM+T +Q G+ ++ F +MLR G+ P+
Sbjct: 452 WKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLS 511
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC+ ++G+ A + K + V + G ++ A +P +
Sbjct: 512 SLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-D 570
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS---AGRLNDAA 417
W A++G H + + R+ +D + HI L ++ + AG +++A
Sbjct: 571 KGVVSWSAMIGGLAQHGHGKRALDVFRRM--VDERIAPNHITLTSVLCACNHAGLVDEAK 628
Query: 418 RARKMMKE 425
MKE
Sbjct: 629 GYFSSMKE 636
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ + VHAH++ F D+ N ++ YAKCG +++A F +P K +V+W
Sbjct: 517 CASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSW 576
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I G +Q+ + A+ +F +M+ + PN TL+SVL A D+ +
Sbjct: 577 SAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKE 636
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG 169
+G D S ++D+ R ++DDA L ++ N W AL+A
Sbjct: 637 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
S S + T A+T SL G +HAH++KSG L+ N L+ Y+K A +VF+
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSG--LLHAFRNHLLSFYSKCRLPGSARRVFDET 63
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
VSW+S++T + + L + + F M G+ N+ VL AGL G
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GV 120
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A+ G+ + V + G G +D A + E + A W ++ A
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/564 (44%), Positives = 362/564 (64%), Gaps = 1/564 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + L++ +HAHIL + + + ++N Y+K + ++FDE P K TW+
Sbjct: 36 TRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWS 95
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++IS ++QN+ P A+ F +ML G++P+ S KA G D G+ VH +K
Sbjct: 96 SVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD-VGKSVHCLAVK 154
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GY +V+VGSSL+DMYA+ ++ DA LF + +N VSW+ +I G+A+ +G +AL
Sbjct: 155 TGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTL 214
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F + L E + F++SSV +S+ LE GK +H +K +FVG+ L+ +Y+K
Sbjct: 215 FKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSK 274
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G IE A +VF+ + R++ WNSML CAQH + FE+M G+ PN ++FL V
Sbjct: 275 CGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSV 334
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L ACSHAGL+++G+ YF+LM+ +G+EPE HY + VDLLGRAG L A+ I++MP+ PT
Sbjct: 335 LYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+VWGALL CR+HK+ E+ A+ A+RI E+D SG H+LL+N YA+AGR +AAR RKM
Sbjct: 395 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 454
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
+++ GVKKE SWVE N VH F A D +H + I++K E+ E++++ GYV D+S V
Sbjct: 455 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 514
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D +E+ ++ HSE+LA+AF LI+ PPG I + KN+RVCGDCH+A KF SK R
Sbjct: 515 LRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGR 574
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
+IVRD NRFH F DG CSCGDYW
Sbjct: 575 VLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 177/330 (53%), Gaps = 3/330 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ + VH + + + D+ + +++++ YAKCG + +AR LFDEMP +++V+W
Sbjct: 136 CGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSW 195
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I GY+Q D A+ LF Q L + N FT SSV++ + +T + G+ +H CL
Sbjct: 196 SGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVC-SSSTFLELGKLIHGLCL 254
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K +D + +VGS+L+ +Y++ ++ A+ +F + ++N WN+++ A+ + ++
Sbjct: 255 KMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFG 314
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G +P S+ SV A + G +E+G+ + + G + +LVD+
Sbjct: 315 LFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLG 374
Query: 242 KSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
++G +++A V ++ R S W ++LTGC H + +++L + + + L
Sbjct: 375 RAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVL 434
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ A + AG +E +++ GV+ E
Sbjct: 435 -LSNAYAAAGRYEEAARMRKMLRDRGVKKE 463
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ FE + ++ + + SL QG +HAH++K G Q + V + L+++Y+K+
Sbjct: 18 QNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPL 77
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ +VF+ K+ +W+S+++ AQ+ +++F +ML +G+ P+ + AC
Sbjct: 78 FSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACG 137
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
D G+ L K G + + VD+ + G + A EMP + G
Sbjct: 138 FLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSG 197
Query: 368 ALLGACRMHKNVE-LGAYAAERIFELDPHD 396
+ G ++ VE L + I ++D +D
Sbjct: 198 MIYGYAQLDDGVEALTLFKQALIEDVDVND 227
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/560 (45%), Positives = 358/560 (63%), Gaps = 3/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ R +H + + + F++ + + +++ Y+KCG + AR +FD M K +V+W ++I G
Sbjct: 292 LRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDG 351
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN P A+ +F +M+ ++ T+ L A A D + GR VH +
Sbjct: 352 YVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHAC-ADLGDVEQGRFVHKLLDQLELGS 410
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V V +SL+ MY++ ++D A +F L+ K VSWNA+I G+A+ +A+ F +M
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ +P F+ SV ALA L Q KW+H VI++ FV LVDMYAK G++
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVH 530
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A K+F+ + +R V +WN+M+ G HGLGKA + FEKM + I PN+VTFLCVL+ACS
Sbjct: 531 TARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACS 590
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL++EG YF MKK +G+EP HY VDLLGRA L+ A FI++MPIEP +V+
Sbjct: 591 HSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVF 650
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GA+LGACR+HKNVELG AA RIF+LDP D G H+LLANIYA+A + AR R M++
Sbjct: 651 GAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKK 710
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G++K P S VE +N VH F + +HPQ I+ + +IK GY+PD++ V
Sbjct: 711 GIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSVHDVE 770
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D +E L HSEKLA+AF+L++T PG+TIH++KN+RVCGDCH+A K+ S V +REIIV
Sbjct: 771 DVV-KEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIV 829
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF+DG CSCGDYW
Sbjct: 830 RDMRRFHHFKDGTCSCGDYW 849
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 196/371 (52%), Gaps = 9/371 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT- 60
CT +K+L + + I+ + ++ Q +++ + K G L EA ++F P++D +
Sbjct: 87 CTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQ--PIEDKIDE 141
Query: 61 -WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ ++ GY++N ++A+ F +M G++P + + +LK G A D + G+++H
Sbjct: 142 LYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNA-DLRKGKEIHCQ 200
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ G+ NV+ + +++MYA+ +++A+ +F + ++ V WN +I+G+A+ G+ A
Sbjct: 201 LIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTA 260
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L M EG P + S+ A+A GSL G+ +H + +++G + V LVDM
Sbjct: 261 LELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDM 320
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K GS+ A +F+R+ + VVSWNSM+ G Q+G A + F+KM+ + VT
Sbjct: 321 YSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTV 380
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ L AC+ G +++G+ L+ + + + + + + + + +D A + +
Sbjct: 381 MGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ- 439
Query: 360 EPTAAVWGALL 370
T W A++
Sbjct: 440 HKTLVSWNAMI 450
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 151/290 (52%), Gaps = 7/290 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +++ R VH + +D+++ N++++ Y+KC +D A ++F+ + K +V+W
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY+QN + AI F +M +KP+ FT+ SV+ A + + + +H +
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQ-AKWIHGLVI 505
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D NV+V ++L+DMYA+ + A LF ++ ++ +WNA+I G+ G+ AL
Sbjct: 506 RTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALE 565
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMY 240
F +M +E +P ++ V +A + +G +E+G + K G A +VD+
Sbjct: 566 LFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLL 625
Query: 241 AKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG---LG-KATVRWFE 285
++ + +A ++ +S + +ML C H LG KA R F+
Sbjct: 626 GRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFD 675
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/568 (42%), Positives = 361/568 (63%), Gaps = 12/568 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ ++E + VH HI ++ + + NT+LN Y K L+EA LFDEMP +++V+W
Sbjct: 65 CSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSW 124
Query: 62 TALISGYSQ--NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
T +IS YS ND+ +IL M R G++PN FT SSVL+A RQ+H
Sbjct: 125 TTMISAYSNKLNDKALKCLIL---MFREGVRPNMFTYSSVLRACDGLPN----LRQLHCG 177
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G + +V+V S+L+D+Y+++ +D+A +F + +++ V WN++I G A+ S+G +A
Sbjct: 178 IIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEA 237
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F M R GF + +SV A LE G+ VH HV+K L+ + N L+DM
Sbjct: 238 LNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLI--LNNALIDM 295
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K GS+EDA F+R++++DV+SW++M+ G AQ+G + + FE M +G PN +T
Sbjct: 296 YCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITV 355
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L VL ACSHAGL+++G YF MKK GV+P HY +DLLGRAG LD A+K I EM
Sbjct: 356 LGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEME 415
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
EP + W LLGACR+H+NV+L YAA++I EL+P D+G +ILL+NIYA+ R D A
Sbjct: 416 CEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAE 475
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK M G++K P CSW+E +H+F+ D +HP+ I ++ ++ E++ +GYVPD
Sbjct: 476 VRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPD 535
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
++ VL + +++E L+ HSEKLA+ F L++ T+ I+KN+R+CGDCH K S+
Sbjct: 536 TNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSR 595
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ R I++RD R+HHF+DG CSCGDYW
Sbjct: 596 MEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 5/195 (2%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A+R M R G +YS + ++ G++++GK VH H+ G + FV NTL+
Sbjct: 38 RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+MY K +E+AE +F+ + +R+VVSW +M++ + L ++ M R G+ PN
Sbjct: 98 NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGVRPNMF 156
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T+ VL AC GL + Q + ++K G+E + +D+ + LD AL EM
Sbjct: 157 TYSSVLRACD--GLPNLRQLHCGIIKT-GLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213
Query: 358 PIEPTAAVWGALLGA 372
P VW +++G
Sbjct: 214 PTRDL-VVWNSIIGG 227
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/564 (44%), Positives = 361/564 (64%), Gaps = 1/564 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + L++ +HAHIL + + + ++N Y+K + ++FDE P K TW+
Sbjct: 36 TRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWS 95
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++IS ++QN+ P A+ F +ML G++P+ S KA G D G+ VH +K
Sbjct: 96 SVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD-VGKSVHCLAVK 154
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GY +V+VGSSL+DMYA+ ++ DA LF + +N VSW+ +I G+A+ +G +AL
Sbjct: 155 TGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTL 214
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F + L E + F++SSV +S+ LE GK +H +K +FVG+ L+ +Y+K
Sbjct: 215 FKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSK 274
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G IE A +VF+ + R++ WNSML CAQH + FE+M G+ PN + FL V
Sbjct: 275 CGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSV 334
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L ACSHAGL+++G+ YF+LM+ +G+EPE HY + VDLLGRAG L A+ I++MP+ PT
Sbjct: 335 LYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+VWGALL CR+HK+ E+ A+ A+RI E+D SG H+LL+N YA+AGR +AAR RKM
Sbjct: 395 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 454
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
+++ GVKKE SWVE N VH F A D +H + I++K E+ E++++ GYV D+S V
Sbjct: 455 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 514
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D +E+ ++ HSE+LA+AF LI+ PPG I + KN+RVCGDCH+A KF SK R
Sbjct: 515 LRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGR 574
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
+IVRD NRFH F DG CSCGDYW
Sbjct: 575 VLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 176/330 (53%), Gaps = 3/330 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ + VH + + + D+ + +++++ YAKCG + +AR LFDEMP +++V+W
Sbjct: 136 CGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSW 195
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I GY+Q D A+ LF Q L + N FT SSV++ + +T + G+ +H CL
Sbjct: 196 SGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVC-SSSTFLELGKLIHGLCL 254
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K +D + +VGS+L+ +Y++ ++ A+ +F + ++N WN+++ A+ + ++
Sbjct: 255 KMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFG 314
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G +P + SV A + G +E+G+ + + G + +LVD+
Sbjct: 315 LFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLG 374
Query: 242 KSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
++G +++A V ++ R S W ++LTGC H + +++L + + + L
Sbjct: 375 RAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVL 434
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ A + AG +E +++ GV+ E
Sbjct: 435 -LSNAYAAAGRYEEAARMRKMLRDRGVKKE 463
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ FE + ++ + + SL QG +HAH++K G Q + V + L+++Y+K+
Sbjct: 18 QNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPL 77
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ +VF+ K+ +W+S+++ AQ+ +++F +ML +G+ P+ + AC
Sbjct: 78 FSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACG 137
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
D G+ L K G + + VD+ + G + A EMP + G
Sbjct: 138 FLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSG 197
Query: 368 ALLGACRMHKNVE-LGAYAAERIFELDPHD 396
+ G ++ VE L + I ++D +D
Sbjct: 198 MIYGYAQLDDGVEALTLFKQALIEDVDVND 227
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/568 (45%), Positives = 362/568 (63%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C R +H ++ + D + +++ YAK G LD+ARK+FD MP +D++ W
Sbjct: 316 CAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILW 375
Query: 62 TALISGYSQNDQPENAIILFSQMLR--LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
ALISG S + + + LF +M + L L N+ TL+SVLK++ A + RQVHA
Sbjct: 376 NALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKST-ASSEAICHTRQVHAL 434
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G + +V + L+D Y + Q+D A +F S + +S ++ ++ GE A
Sbjct: 435 AEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDA 494
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F +MLR+G EP F SS+ A S + EQGK VHAH+IK F GN LV
Sbjct: 495 IKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYA 554
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GSIEDA+ F+ L +R +VSW++M+ G AQHG GK + F +ML G+APN +T
Sbjct: 555 YAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITL 614
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL+AC+HAGL+D+ + YF MK+ G++ E HY +D+LGRAG L+ A++ + MP
Sbjct: 615 TSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMP 674
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ AAVWGALLGA R+H++ ELG AAE++F L+P SG H+LLAN YASAG ++ A+
Sbjct: 675 FQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAK 734
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+MK+S VKKEPA SWVE K+ VH F+ D +HP I+ K E+ + + + GYVP+
Sbjct: 735 VRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPN 794
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
L D+ E+E L HSE+LA+AFALISTP G+ I +KKN+R+C DCH AFK+ SK
Sbjct: 795 VEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISK 854
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V REII+RD NRFHHF +G CSCGDYW
Sbjct: 855 IVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 186/364 (51%), Gaps = 11/364 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+H+L S N +L Y++C AR +FDE+P V+W++L++ YS N
Sbjct: 26 LHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGM 83
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P +A++ F M G+ N+F L VLK A D +FG QVHA + +V+V +
Sbjct: 84 PRDALLAFRAMRGRGVPCNEFALPVVLKC----APDVRFGAQVHALAVATRLVHDVFVAN 139
Query: 134 SLLDMYARFDQMDDAWFLFTAL----ESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+L+ +Y F +D+A +F +N VSWN +I+ + + + A+ F EM+
Sbjct: 140 ALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWS 199
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G P F +S V A + LE G+ VH V+++G + F N LVDMY+K G IE A
Sbjct: 200 GERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMA 259
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF ++ DVVSWN+ ++GC HG + +M +G+ PN T VL AC+ A
Sbjct: 260 ATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGA 319
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
G + G+ M K + +E V VD+ + G LD A K MP +W AL
Sbjct: 320 GAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNAL 378
Query: 370 LGAC 373
+ C
Sbjct: 379 ISGC 382
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 224/459 (48%), Gaps = 48/459 (10%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM----PVKDMVTWTALISGYS 69
VHA + + +D+ + N ++ Y G +DEAR++FDE ++ V+W +IS Y
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+NDQ +AI +F +M+ G +PN+F S V+ A G+ D + GRQVH ++ GY+ +V
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNAC-TGSRDLEAGRQVHGAVVRTGYEKDV 240
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ ++L+DMY++ ++ A +F + + + VSWNA I+G +AL +M
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G P F+ SSV A A G+ G+ +H ++K+ FV LVDMYAK G ++DA
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA 360
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQVTFLCVLTACS 307
KVF+ + +RD++ WN++++GC+ G + F +M + G + N+ T VL + +
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA 420
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE----------- 356
+ + + AL +K G+ + +D + G LD A+K +E
Sbjct: 421 SSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT 480
Query: 357 -----------------------MPIEPTAAVWGALLGACRMHKNVELG----AYAAERI 389
+EP + V +LL AC E G A+ +R
Sbjct: 481 MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ 540
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
F D +G ++ A YA G + DA A + E G+
Sbjct: 541 FTSDVF-AGNALVYA--YAKCGSIEDADMAFSGLPERGI 576
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 220/431 (51%), Gaps = 11/431 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L+ R VH ++ + ++ D+ N +++ Y+K G ++ A +F++MP D+V+W
Sbjct: 215 CTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSW 274
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A ISG + A+ L QM GL PN FTLSSVLKA +GAGA + GRQ+H F
Sbjct: 275 NAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFN--LGRQIHGFM 332
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D++ +V L+DMYA+ +DDA +F + ++ + WNALI+G + + L
Sbjct: 333 VKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVL 392
Query: 181 RTFSEMLREG--FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
F M +EG + + +SV + AS+ ++ + VHA K G + V N L+D
Sbjct: 393 SLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLID 452
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
Y K G ++ A KVF D++S +M+T +Q G+ ++ F +MLR G+ P+
Sbjct: 453 SYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFV 512
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+L AC+ ++G+ A + K + V + G ++ A +P
Sbjct: 513 LSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLP 572
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS---AGRLND 415
E W A++G H + + R+ LD + HI L ++ ++ AG ++D
Sbjct: 573 -ERGIVSWSAMIGGLAQHGHGKRALDLFHRM--LDEGVAPNHITLTSVLSACNHAGLVDD 629
Query: 416 AARARKMMKES 426
A + + MKE+
Sbjct: 630 AKKYFESMKET 640
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ S ++ SL G +H+H++KSG L+A N L+ +Y++ A VF+ +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSG--LLAGFSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
VSW+S++T + +G+ + + F M G+ N+ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL 110
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/564 (44%), Positives = 354/564 (62%), Gaps = 1/564 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + L + + +HAHI+ S + + + ++N Y+K + ++F+E K TW+
Sbjct: 65 TRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWS 124
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++IS ++QN++P AI F +M+ L P+ S KA D G+ VH +K
Sbjct: 125 SVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCD-VGKSVHCLVIK 183
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GYD +V+VGSSL+DMYA+ + +A +F + +N VSW+ +I G+ + E E+A+R
Sbjct: 184 TGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRL 243
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F E L EG + F+ SSV S LE GK +H K+ L FVG++L+ +Y+K
Sbjct: 244 FKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSK 303
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G IE A +VF+ + +++ WN+ML CAQH K F KM G+ PN +TFLCV
Sbjct: 304 CGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCV 363
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L ACSHAGL++EG+ YFALMKK+ +EP HY + VDLLGRAG L AL I+ MP EPT
Sbjct: 364 LYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+VWGA + CR+H N +L A+AA+++FEL SG H++L+N YA+AGR DAA+ARKM
Sbjct: 424 ESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
+++ GVKKE SW+E N VH F A D H + I++K ++ E++++ GYV D+S V
Sbjct: 484 LRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFV 543
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L +E+ ++ HSE+LA+AF LIS P G I I KN+RVCGDCH+A KF SK+ R
Sbjct: 544 LREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGR 603
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
IIVRD NRFH F DG CSC DYW
Sbjct: 604 VIIVRDNNRFHRFEDGKCSCADYW 627
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 158/279 (56%), Gaps = 10/279 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + VH ++ + + D+ + +++++ YAKCG + EAR +FDEMP +++V+W
Sbjct: 165 CAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSW 224
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I GY+Q + E A+ LF + L GL N FTLSSV++ G+ AT + G+Q+H C
Sbjct: 225 SGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGS-ATLLELGKQIHGLCF 283
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K YD + +VGSSL+ +Y++ ++ A+ +F + KN WNA++ A+ + ++A
Sbjct: 284 KTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFD 343
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA----HVIKSGGQLVAFVGNTLV 237
F++M G P ++ V A + G +E+GK A + I+ G Q A ++V
Sbjct: 344 LFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYA----SMV 399
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
D+ ++G +++A V + S W + +TGC HG
Sbjct: 400 DLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHG 438
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/560 (43%), Positives = 352/560 (62%), Gaps = 3/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + +H + + + F + + + + Y+KCG ++ AR +FD M K +V+W +++ G
Sbjct: 264 LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDG 323
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN +PE AI +F +ML G+ P T+ L A A D + G+ VH F +
Sbjct: 324 YVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHAC-ADLGDLERGKFVHKFVDQLNLGS 382
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++ V +SL+ MY++ ++D A +F L + VSWNA+I G+A+ +AL FSEM
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G +P F+ SV ALA KW+H +I+S FV LVDMY+K G+I
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A K+F+ + R V++WN+M+ G HGLG+A + F+KM + + PN +T+L V++ACS
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+DEG +F MK+ +G+EP HY VDLLGRAG + A FI MPI P V+
Sbjct: 563 HSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GA+LGAC++HKN+E+G AA+++FEL+P + G H+LLANIYAS + + A RK M++
Sbjct: 623 GAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKK 682
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+KK P CS VE +N VH F + HPQ I+ E+ +IK GYVPD++ +L
Sbjct: 683 GLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVE 742
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D + E L HSEKLA+AF L++T PG+TIH++KN+RVCGDCH+A K+ S V REIIV
Sbjct: 743 DDVQ-EQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIV 801
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF++G CSCGDYW
Sbjct: 802 RDMQRFHHFKNGICSCGDYW 821
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 172/315 (54%), Gaps = 4/315 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +K+L + + ++ + N+ Q +++ ++K G ++EA ++F+ + K +
Sbjct: 59 CTSMKELHQ---IIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ GY++N E A+ +M +KP + + +LK G A D K G+++H +
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA-DLKRGKEIHGQLI 174
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ NV+ + +++MYA+ Q+DDA+ +F + ++ VSWN +IAG ++ +KAL
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M EG P + +V A A G L GK +H + I++G + + L DMY+
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E A +F+ + ++ VVSWNSM+ G Q+G + + FEKML GI P VT +
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354
Query: 302 VLTACSHAGLLDEGQ 316
L AC+ G L+ G+
Sbjct: 355 ALHACADLGDLERGK 369
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 149/276 (53%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + VH + +DI++ N++++ Y+KC +D A +F+ + + V+W
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY+QN + A+ FS+M LG+KP+ FT+ SV+ A A + + + +H +
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPAL-AELSVTRHAKWIHGLII 477
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D N++V ++L+DMY++ + A LF + ++ ++WNA+I G+ G AL
Sbjct: 478 RSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALD 537
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F +M + EP +Y SV +A + +G +++G H +K L + + +VD+
Sbjct: 538 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 240 YAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
++G I++A + + N + + + +ML C H
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIH 632
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L + A+ +H I+ S +I + +++ Y+KCG + ARKLFD + + ++TW A+
Sbjct: 463 LSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAM 522
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY + A+ LF +M + ++PN T SV+ A D+ R + YG
Sbjct: 523 IDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYG 582
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARKSEGEKAL 180
+ ++ +++D+ R ++ +AW F+ S + A++ H GEKA
Sbjct: 583 LEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAA 642
Query: 181 RTFSEM 186
+ E+
Sbjct: 643 KKLFEL 648
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/567 (42%), Positives = 355/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK + +H + + +D++ +++ YAKCG A F+ M +D+VTW
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+GY+Q P NAI +F ++ + P+ T+ V+ A A D G +H +
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC-ALLNDLDQGTCIHGLIV 558
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
K G++ + +V ++L+DMYA+ + A FLF + +K+EV+WN +IA + + ++A+
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+F +M E F P ++ SV A A + +G HA +I+ G VGN+L+DMY
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMY 678
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G ++ +EK+FN + +D VSWN+ML+G A HG G + F M + + + V+F+
Sbjct: 679 AKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV 738
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+AC HAGL++EG+ F ++ K+ ++P+ HY VDLLGRAGL D L FI+ MP+
Sbjct: 739 SVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPV 798
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP A VWGALLG+CRMH NV+LG A + + +L+P + ++L++IYA +GR DA +A
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 858
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M + G+KK P CSWVE KN VH F D +HPQ +H W + EK+++IGYVPD
Sbjct: 859 RSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDR 918
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL +++++E L HSE+LA+ FAL++TPPGSTI I KN+RVC DCH+ KF SK+
Sbjct: 919 SCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKI 978
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD RFHHF DG CSC DYW
Sbjct: 979 TTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 3/368 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L ++ R +H ++ F + A+ N +++ Y+KCG +D AR++FD+M +D V+W +
Sbjct: 243 LSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM 300
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++GY+ N + LF +M ++ N+ + S A+ A D + G+++H L+
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAA-AETIDLEKGKEIHGCALQQR 359
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D ++ V + L+ MYA+ + + A LF L+ ++ V+W+A+IA + E+AL F
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM + +P + S+ A A L+ GK +H +K+ G LV MYAK G
Sbjct: 420 EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG 479
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
A FNR+ RD+V+WNS++ G AQ G + F K+ + I P+ T + V+
Sbjct: 480 FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVP 539
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+ LD+G L+ K G E + +D+ + G L A +
Sbjct: 540 ACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Query: 365 VWGALLGA 372
W ++ A
Sbjct: 600 TWNVIIAA 607
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 180/371 (48%), Gaps = 4/371 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+E H I + D+ + +++ Y+K G L AR++FD+MP +D+V W
Sbjct: 139 CTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAW 198
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G SQ++ P A+ F M +G++P+ +L ++ ++ + R +H +
Sbjct: 199 NAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI-CKLSNIELCRSIHGYVF 257
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D++ V + L+D+Y++ +D A +F + +++VSW ++AG+A + L
Sbjct: 258 R--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLE 315
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M S S F A A T LE+GK +H ++ V L+ MYA
Sbjct: 316 LFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYA 375
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G E A+++F L RD+V+W++++ Q G + + F++M + PN+VT +
Sbjct: 376 KCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMS 435
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ LL G+ K ++ + + V + + G AL M
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SR 494
Query: 362 TAAVWGALLGA 372
W +L+
Sbjct: 495 DIVTWNSLING 505
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 173/315 (54%), Gaps = 7/315 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + +HA I+ S FK+ ++ + ++N Y+ D AR +FD P + W
Sbjct: 42 CKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILW 97
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y+++ Q A+ ++ M+ GL+P+++T + VLKA GA + + G H
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKAC-TGALNLQEGVWFHGEID 156
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + +V++G+ L+DMY++ + A +F + ++ V+WNA+IAG ++ + +A+
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G EP+ S ++F + ++E + +H +V + + V N L+D+Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYS 274
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF++++ +D VSW +M+ G A +G + F+KM + N+V+ +
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 302 VLTACSHAGLLDEGQ 316
A + L++G+
Sbjct: 335 AFLAAAETIDLEKGK 349
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 135/266 (50%), Gaps = 20/266 (7%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA + G+ + + + L+++Y+ F + D A +F + + + + WN++I + R
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ +AL + M+ +G EP ++++ V A +L++G W H + + G + F+G
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LVDMY+K G ++ A +VF+++ KRDVV+WN+M+ G +Q V +F M G+ P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 295 NQVTFLCV---LTACSHAGLLDEGQGY-----FALMKKHGVEPEEAHYVTFVDLLGRAGL 346
+ V+ L + + S+ L GY F+ +G+ +DL + G
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL----------IDLYSKCGD 278
Query: 347 LDRALKFIREMPIEPTAAVWGALLGA 372
+D A + +M ++ WG ++
Sbjct: 279 VDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/566 (41%), Positives = 361/566 (63%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L E + +H ++ S D + N+++N YAKCG + A K+F E+P +D+V+W
Sbjct: 201 CASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSW 260
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALI+G+ + + +F+QML G PN +T S+L+ S + +D G+QVHA +
Sbjct: 261 TALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILR-SCSSLSDVDLGKQVHAQIV 318
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D N +VG++L+DMYA+ ++DA +F L ++ +W ++AG+A+ +GEKA++
Sbjct: 319 KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 378
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M REG +P F+ +S + + +L+ G+ +H+ IK+G FV + LVDMYA
Sbjct: 379 CFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYA 438
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +EDAE VF+ L+ RD VSWN+++ G +QHG G ++ FE ML G P++VTF+
Sbjct: 439 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 498
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL++EG+ +F +L K +G+ P HY VD+LGRAG FI EM +
Sbjct: 499 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 558
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+W +LGAC+MH N+E G AA ++FEL+P +ILL+N++A+ G +D R
Sbjct: 559 SNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVR 618
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M GVKKEP CSWVE VH+F+++D +HP+ IH K +++ +K+ +GY P++
Sbjct: 619 ALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTD 678
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HVL +E++ L HSE+LALAFAL+ST TI I KN+R+CGDCH K S++
Sbjct: 679 HVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEIT 738
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+E++VRD N FHHF++G CSC ++W
Sbjct: 739 NQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 185/344 (53%), Gaps = 6/344 (1%)
Query: 11 ARIVHAHILGSAFKNDIA----MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
A+ + I+ KN I + ++++N Y KC L AR++ +EMP++D+ W +S
Sbjct: 4 AKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLS 63
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
+ + A+ LF M ++ NQF +S++ A+ A D+ +G +HA KYG++
Sbjct: 64 SANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAA-ASLGDNHYGESIHACVCKYGFE 122
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++ + ++ + MY + +++ W F A+ +N S N L++G ++ R ++
Sbjct: 123 SDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQL 182
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
L EGFEP +++ S+ AS G L +GK +H VIKSG + + N+LV++YAK GS
Sbjct: 183 LVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSA 242
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A KVF + +RDVVSW +++TG G G +R F +ML G PN TF+ +L +C
Sbjct: 243 NYACKVFGEIPERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISILRSC 301
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
S +D G+ A + K+ ++ + VD+ + L+ A
Sbjct: 302 SSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 345
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G + ++ SSL+++Y + + + A + + ++ WN ++ ++A+
Sbjct: 16 IKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAV 75
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F M F ++S+ +A AS G G+ +HA V K G + + N V MY
Sbjct: 76 QLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMY 135
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K+ S+E+ + F ++ ++ S N++L+G R ++L G PN TF+
Sbjct: 136 MKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFI 195
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C+ G L+EG+ + K G+ P+ + + V++ + G + A K E+P E
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP-E 254
Query: 361 PTAAVWGALL 370
W AL+
Sbjct: 255 RDVVSWTALI 264
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 34/228 (14%)
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
VIK+G + + ++LV++Y K S++ A +V + +DV WN L+ +
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
V+ F M I NQ F +++A + G G+ A + K+G E + FV +
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
+ ++ +F + M IE A+ L G C + + D GP
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFC-----------------DTETCDQGPR 177
Query: 401 ILL--------ANIY---------ASAGRLNDAARARKMMKESGVKKE 431
IL+ N+Y AS G LN+ + +SG+ +
Sbjct: 178 ILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPD 225
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/573 (42%), Positives = 367/573 (64%), Gaps = 14/573 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L++ + VHAH++ + + ++ +L Y KC CL++ARK+ DEMP K++V+W
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL----KASGAGATDDKFGRQVH 117
TA+IS YSQ A+ +F++M+R KPN+FT ++VL +ASG G G+Q+H
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG-----LGKQIH 176
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K+ YD +++VGSSLLDMYA+ Q+ +A +F L ++ VS A+IAG+A+ E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F + EG P + +Y+S+ TAL+ L+ GK H HV++ A + N+L+
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPN 295
DMY+K G++ A ++F+ + +R +SWN+ML G ++HGLG+ + F +++R+ + P+
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPD 355
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALM--KKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
VT L VL+ CSH + D G F M ++G +P HY VD+LGRAG +D A +F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I+ MP +PTA V G+LLGACR+H +V++G R+ E++P ++G +++L+N+YASAGR
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
D R MM + V KEP SW++ + +H F AND HP+R + K +EIS K+KQ
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GYVPD S VL D++++E L HSEKLAL F LI+T G I + KN+R+C DCH+
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SKV ERE+ +RD NRFH DG CSCGDYW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM G E Y ++ A +L G+ VHAH+IK+ ++ L+ Y K
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+EDA KV + + +++VVSW +M++ +Q G + F +M+R+ PN+ TF VLT
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+C A L G+ L+ K + + +D+ +AG + A + +P
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/570 (42%), Positives = 373/570 (65%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
CT L L + +H+ ++ D+ + ++++ YAKC G +D++RK+F++MP ++
Sbjct: 66 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 125
Query: 59 VTWTALISGYSQNDQPEN-AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTA+I+ Y+Q+ + + AI LF +M+ ++PN F+ SSVLKA G +D G QV+
Sbjct: 126 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-NLSDPYTGEQVY 184
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++ +K G VG+SL+ MYAR +M+DA F L KN VS+NA++ G+A+ + E
Sbjct: 185 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 244
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F+E+ G + F+++S+ + AS G++ +G+ +H ++K G + + N L+
Sbjct: 245 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 304
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VFN + R+V+SW SM+TG A+HG + F KML G PN++
Sbjct: 305 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 364
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH G++ EGQ +F ++ K+HG+ P HY VDLLGR+GLL A++FI
Sbjct: 365 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 424
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+ A VW LLGACR+H N ELG +AAE I E +P D +ILL+N++ASAG+ D
Sbjct: 425 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 484
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+ RK MKE + KE CSW+E +N VH F + +HPQ I+++ +++ KIK++GY+
Sbjct: 485 VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYI 544
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD+ VL +++++E L HSEK+A+AF LIST I I KN+RVCGDCH+A K+
Sbjct: 545 PDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYI 604
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S REI+VRD+NRFHH ++G CSC DYW
Sbjct: 605 SMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 173/316 (54%), Gaps = 5/316 (1%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A K+FD+MP +++VTWT +I+ ++Q +AI LF M G P++FT SSVL A
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF---DQMDDAWFLFTALESKNEVS 162
G+Q+H+ ++ G +V VG SL+DMYA+ +DD+ +F + N +S
Sbjct: 69 LGL-LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 163 WNALIAGHARKSEGEK-ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
W A+I +A+ E +K A+ F +M+ P HFS+SSV A + G+ V+++
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
+K G V VGN+L+ MYA+SG +EDA K F+ L ++++VS+N+++ G A++ +
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL 341
F ++ GI + TF +L+ + G + +G+ + K G + + + +
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 342 GRAGLLDRALKFIREM 357
R G ++ A + EM
Sbjct: 308 SRCGNIEAAFQVFNEM 323
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/567 (44%), Positives = 366/567 (64%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ K + VH L + D+ + +L Y K G + EA++ F+EMP D++ W
Sbjct: 215 CNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPW 274
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ +IS Y+Q+D+ + A+ LF +M + + PN FT +SVL+A A G Q+H+
Sbjct: 275 SLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQAC-ASLVLLNLGNQIHSCV 333
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK G D NV+V ++L+D+YA+ +++++ LFT KNEV+WN +I G+ + +GEKAL
Sbjct: 334 LKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKAL 393
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
FS ML +PT +YSSV A AS +LE G+ +H+ IK+ + V N+L+DMY
Sbjct: 394 NLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMY 453
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G I+DA F+++ K+D VSWN+++ G + HGLG + F+ M ++ PN++TF+
Sbjct: 454 AKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFV 513
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACS+AGLLD+G+ +F ++++ +G+EP HY V LLGR+G D A+K I E+P
Sbjct: 514 GVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPF 573
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P+ VW ALLGAC +HKN++LG A+R+ E++P D H+LL+N+YA+A R ++ A
Sbjct: 574 QPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYV 633
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK MK+ VKKEP SWVE + VH F D +HP +I + +K + GYVPD
Sbjct: 634 RKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDC 693
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL + E+E L +HSE+LALAF LI P G +I I KN+R+C DCH+ K SK+
Sbjct: 694 SVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKI 753
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REI++RD NRFHHFR G CSCGDYW
Sbjct: 754 VQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 182/358 (50%), Gaps = 3/358 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H HIL D+ QN +LN Y G L++A KLFDEMP+ + V++ L G+S++ Q
Sbjct: 25 LHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQ 84
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ A L ++ R G + NQF +++LK + D VHA+ K G+ + +VG+
Sbjct: 85 FQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADT-CLSVHAYVYKLGHQADAFVGT 143
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D Y+ +D A +F + K+ VSW ++A +A E +L F +M G+ P
Sbjct: 144 ALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRP 203
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+F+ S+ + + + GK VH +K +VG L+++Y KSG I +A++ F
Sbjct: 204 NNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFF 263
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLL 312
+ K D++ W+ M++ AQ K + F +M ++ + PN TF VL AC+ LL
Sbjct: 264 EEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLL 323
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G + + K G++ +D+ + G ++ ++K E W ++
Sbjct: 324 NLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTG-STEKNEVAWNTII 380
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D G+ +H LK+G +++ + LL+ Y F ++DA LF + N VS+ L
Sbjct: 18 DPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQ 77
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
G +R + ++A R + REG+E F ++++ L S + VHA+V K G Q
Sbjct: 78 GFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQA 137
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
AFVG L+D Y+ G+++ A +VF+ + +D+VSW M+ A++ + ++ F +M
Sbjct: 138 DAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMR 197
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
G PN T L +C+ G+ K + + + ++L ++G +
Sbjct: 198 IMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 257
Query: 349 RALKFIREMP 358
A +F EMP
Sbjct: 258 EAQQFFEEMP 267
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
SY+++ GK +H H++K G L F N L++ Y G +EDA K+F+ +
Sbjct: 5 SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+ VS+ ++ G ++ + R ++ R G NQ F +L L D
Sbjct: 65 PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
A + K G + + +D G +D A
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAA 158
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 360/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH L + +D+ + +L YAK G + +A++LF+EMP D++ W
Sbjct: 247 CLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPW 306
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+ Y+Q+D+ + A+ LF +M + + PN FT +SVL+A + + D G+Q+H+ L
Sbjct: 307 SLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLD-LGKQIHSCVL 365
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+G + NV+V ++++D+YA+ +++++ LF L +N+V+WN +I G+ + +GE+A+
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMN 425
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+ ML +PT +YSSV A AS +LE G +H+ IK+ V N+L+DMYA
Sbjct: 426 LFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYA 485
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I DA F+++ KRD VSWN+M+ G + HG+ + F+ M PN++TF+
Sbjct: 486 KCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVG 545
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS+AGLL +GQ +F M K + ++P HY V LLGR G D A+K I E+ +
Sbjct: 546 VLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQ 605
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P+ VW ALLGAC +HK V+LG A+ + E++PHD H+LL+N+YA+AGR ++ A R
Sbjct: 606 PSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVR 665
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M++ V+KEP SWVE + VH F D +HP +I +++K + GYVPD +
Sbjct: 666 KYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCN 725
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL E+E L VHSE+LALA+ LI TP +I I KN+R+C DCH+ K SKVV
Sbjct: 726 AVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVV 785
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI++RD NRFHHFR G CSCGDYW
Sbjct: 786 QREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 180/357 (50%), Gaps = 2/357 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H HIL D+ QN +LN Y + L +A KLFDEMP + +++ L GYS++ Q
Sbjct: 57 LHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQ 116
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ ++ + G + N F +++LK +HA K G+ + +VG+
Sbjct: 117 FHQALHFILRIFKEGHEVNPFVFTTLLKLL-VSMDLAHLCWTLHACVYKLGHHADAFVGT 175
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D Y+ +D A +F + K+ VSW ++A +A E++L+ F++M G++P
Sbjct: 176 ALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP 235
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+F+ S + + GK VH +K FVG L+++YAKSG I DA+++F
Sbjct: 236 NNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF 295
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ K D++ W+ M+ AQ K + F +M + + PN TF VL AC+ + LD
Sbjct: 296 EEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLD 355
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ + + K G+ +D+ + G ++ ++K E+P + W ++
Sbjct: 356 LGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWNTII 411
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G+ +H LK G +++ + LL+ Y + + + DA LF + N +S+ L G++R
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ +AL + +EG E F ++++ L S +HA V K G AFV
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G L+D Y+ G+++ A VF+ + +D+VSW M+ A++ + +++ F +M G
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN T L +C + G+ K + + + ++L ++G + A +
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293
Query: 353 FIREMP 358
EMP
Sbjct: 294 LFEEMP 299
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/570 (42%), Positives = 373/570 (65%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
CT L L + +H+ ++ D+ + ++++ YAKC G +D++RK+F++MP ++
Sbjct: 61 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 120
Query: 59 VTWTALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTA+I+ Y+Q+ + + AI LF +M+ ++PN F+ SSVLKA G +D G QV+
Sbjct: 121 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-NLSDPYTGEQVY 179
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++ +K G VG+SL+ MYAR +M+DA F L KN VS+NA++ G+A+ + E
Sbjct: 180 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 239
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F+E+ G + F+++S+ + AS G++ +G+ +H ++K G + + N L+
Sbjct: 240 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 299
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VFN + R+V+SW SM+TG A+HG + F KML G PN++
Sbjct: 300 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 359
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH G++ EGQ +F ++ K+HG+ P HY VDLLGR+GLL A++FI
Sbjct: 360 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 419
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+ A VW LLGACR+H N ELG +AAE I E +P D +ILL+N++ASAG+ D
Sbjct: 420 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 479
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+ RK MKE + KE CSW+E +N VH F + +HPQ I+++ +++ KIK++GY+
Sbjct: 480 VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYI 539
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD+ VL +++++E L HSEK+A+AF LIST I I KN+RVCGDCH+A K+
Sbjct: 540 PDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYI 599
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S REI+VRD+NRFHH ++G CSC DYW
Sbjct: 600 SMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 173/316 (54%), Gaps = 5/316 (1%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A K+FD+MP +++VTWT +I+ ++Q +AI LF M G P++FT SSVL A
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF---DQMDDAWFLFTALESKNEVS 162
G+Q+H+ ++ G +V VG SL+DMYA+ +DD+ +F + N +S
Sbjct: 64 LGL-LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 163 WNALIAGHARKSEGEK-ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
W A+I +A+ E +K A+ F +M+ P HFS+SSV A + G+ V+++
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
+K G V VGN+L+ MYA+SG +EDA K F+ L ++++VS+N+++ G A++ +
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL 341
F ++ GI + TF +L+ + G + +G+ + K G + + + +
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 342 GRAGLLDRALKFIREM 357
R G ++ A + EM
Sbjct: 303 SRCGNIEAAFQVFNEM 318
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/566 (42%), Positives = 365/566 (64%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ L E +HA I+ F + ++NT+++ YA CG ++ AR++FDEM +++ TW
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ +GY+++ E + LF +ML L ++ ++ TL SVL A G A D + G ++ +
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLA-DLELGEWINRYVE 252
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N + +SL+DMYA+ Q+D A LF ++ ++ V+W+A+I+G+++ S +AL
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM + +P + S+ ++ A G+LE GKWVH + K +L +G L+D YA
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYA 372
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E + +VF ++ ++V+SW ++ G A +G GK + +F ML + PN VTF+
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSHAGL+DEG+ F M + G+EP HY VD+LGRAGL++ A +FI+ MPI+
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W LL +C++HKNVE+G + +++ L+P SG +ILL+NIYAS GR DA + R
Sbjct: 493 PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVR 552
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MKE G+KK P CS +E +H F A D+ H Q I+ ++ ++IK GYVP+++
Sbjct: 553 GEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTA 612
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
A++ ++E+ + HSEKLA+AF LI +PPG+TI I KN+RVC DCH+A K SKV
Sbjct: 613 EARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVF 672
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD RFHHF++G CSC DYW
Sbjct: 673 NREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 196/373 (52%), Gaps = 9/373 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC--GCLDEARKLFDEMPVKDM 58
+C ++ L E +HAH++ + + +L + A +D A +F ++ D
Sbjct: 33 QCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDS 89
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVH 117
+ +I G++ P AI+LF +M ++P++FT +LK S A + G Q+H
Sbjct: 90 PAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSE--GEQIH 147
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A +K G+ + +V ++L+ MYA +++ A +F + +N +WN++ AG+ + E
Sbjct: 148 ALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWE 207
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+ ++ F EML + SV TA LE G+W++ +V + G + + +LV
Sbjct: 208 EVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLV 267
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK G ++ A ++F+++ +RDVV+W++M++G +Q + + F +M + I PN++
Sbjct: 268 DMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEI 327
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T + +L++C+ G L+ G+ +KK ++ +D + G ++ +++ +M
Sbjct: 328 TMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKM 387
Query: 358 PIEPTAAVWGALL 370
P++ + W L+
Sbjct: 388 PVKNVLS-WTVLI 399
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/570 (42%), Positives = 372/570 (65%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
CT L L + +H+ ++ D+ + ++++ YAKC G +D++RK+F++MP ++
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 59 VTWTALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTA+I+ Y Q+ + + AI LF +M+ ++PN F+ SSVLKA G +D G QV+
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-NLSDPYTGEQVY 359
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++ +K G VG+SL+ MYAR +M+DA F L KN VS+NA++ G+A+ + E
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 419
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F+E+ G + F+++S+ + AS G++ +G+ +H ++K G + + N L+
Sbjct: 420 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 479
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VFN + R+V+SW SM+TG A+HG + F KML G PN++
Sbjct: 480 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 539
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH G++ EGQ +F ++ K+HG+ P HY VDLLGR+GLL A++FI
Sbjct: 540 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 599
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+ A VW LLGACR+H N ELG +AAE I E +P D +ILL+N++ASAG+ D
Sbjct: 600 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 659
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+ RK MKE + KE CSW+E +N VH F + +HPQ I+++ +++ KIK++GY+
Sbjct: 660 VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYI 719
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD+ VL +++++E L HSEK+A+AF LIST I I KN+RVCGDCH+A K+
Sbjct: 720 PDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYI 779
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S REI+VRD+NRFHH ++G CSC DYW
Sbjct: 780 SMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 191/358 (53%), Gaps = 8/358 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C + + ++VH ++ S + D + NT+++ Y+KCG + AR +F+ M K D+V+
Sbjct: 36 CIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVS 95
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+A++S ++ N AI F ML LG PN++ ++V++A + A G ++ F
Sbjct: 96 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRAC-SNANYAWVGEIIYGFV 154
Query: 121 LKYGY-DWNVYVGSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K GY + +V VG L+DM+ + + A+ +F + +N V+W +I A+
Sbjct: 155 VKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 214
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F +M G+ P F+YSSV +A G L GK +H+ VI+ G L VG +LVD
Sbjct: 215 AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVD 274
Query: 239 MYAK---SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAP 294
MYAK GS++D+ KVF ++ + +V+SW +++T Q G K + F KM+ I P
Sbjct: 275 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRP 334
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
N +F VL AC + G+ ++ K G+ + + + R+G ++ A K
Sbjct: 335 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARK 392
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 7/288 (2%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P T S+L S + + G+ VH ++ G + + V ++L+ +Y++ + A
Sbjct: 23 PPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARL 82
Query: 151 LFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + +K + VSW+A+++ A S +A+ TF +ML GF P + +++V A ++
Sbjct: 83 IFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 142
Query: 210 SLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSM 267
G+ ++ V+K+G + VG L+DM+ K SG + A KVF+++ +R++V+W M
Sbjct: 143 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 202
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+T AQ G + + F M +G P++ T+ VL+AC+ GLL G+ + + + G+
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262
Query: 328 EPEEAHYVTFVDLLGRA---GLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + VD+ + G +D + K +MP E W A++ A
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 309
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 14/223 (6%)
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A T M ++ P +YS + + + + GK VH +++SG +L + V NTL+
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+Y+K G E A +F + KRD+VSW++M++ A + + + F ML G PN+
Sbjct: 70 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGR-AGLLDRALKFIR 355
F V+ ACS+A G+ + + K G +E + +D+ + +G L A K
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189
Query: 356 EMPIEPTAAVWG------ALLGACR----MHKNVELGAYAAER 388
+MP E W A LG R + ++EL Y +R
Sbjct: 190 KMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR 231
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/566 (41%), Positives = 375/566 (66%), Gaps = 3/566 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T+ + L+ + VH I+ + + + + +++ YAKCG + +AR +FD +P K++VTWT
Sbjct: 159 TNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWT 218
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
LI+GY+Q Q + A+ L M + + PN+ T +S+L+ A + G++VH + ++
Sbjct: 219 LLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEH-GKKVHRYIIQ 277
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GY ++V +SL+ MY + +++A LF+ L ++ V+W A++ G+A+ ++A+
Sbjct: 278 SGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINL 337
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F M ++G +P +++SV T+ +S L++GK +H ++ +G L ++ + LV MYAK
Sbjct: 338 FRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAK 397
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGC-AQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
GS++DA VFN++ +R+VV+W +++TGC AQHG + + +F++M + GI P++VTF
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTS 457
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+H GL++EG+ +F ++ +G++P HY FVDLLGRAG L+ A I MP
Sbjct: 458 VLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFI 517
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +VWGALL ACR+H +VE G AAE + +LDP D G ++ L++IYA+AGR DA + R
Sbjct: 518 PGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVR 577
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M++ V KEP SW+E VH+F D +HP+ I+ + +++E+IK++GYVPD+
Sbjct: 578 QVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTR 637
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++++E L HSE+LA+ + L+ TPPG I I KN+RVCGDCH+A KF SKVV
Sbjct: 638 FVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVV 697
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII RD RFHHF DG CSCGD+W
Sbjct: 698 GREIIARDAQRFHHFADGVCSCGDFW 723
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 203/377 (53%), Gaps = 3/377 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L+ L++ R VHA IL S + + ++NT+L+ YAKCG L +AR++FD + +++V+
Sbjct: 56 ECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVS 115
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I + ++ A + M G KP++ T S+L A + G++VH
Sbjct: 116 WTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAF-TNPELLQLGQKVHMEI 174
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G + VG+SL+ MYA+ + A +F L KN V+W LIAG+A++ + + AL
Sbjct: 175 VEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVAL 234
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
M + P +++S+ + +LE GK VH ++I+SG +V N+L+ MY
Sbjct: 235 ELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMY 294
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +E+A K+F+ L RDVV+W +M+TG AQ G + F +M + GI P+++TF
Sbjct: 295 CKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLT+CS L EG+ + G + V + + G +D A +M E
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS-E 413
Query: 361 PTAAVWGALL-GACRMH 376
W A++ G C H
Sbjct: 414 RNVVAWTAIITGCCAQH 430
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 189/345 (54%), Gaps = 13/345 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+ + VH +I+ S + ++ + N+++ Y KCG L+EARKLF ++P +D+VTW
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++GY+Q + AI LF +M + G+KP++ T +SVL + + A + G+++H +
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQE-GKRIHQQLV 377
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG-HARKSEGEKAL 180
GY+ +VY+ S+L+ MYA+ MDDA +F + +N V+W A+I G A+ +AL
Sbjct: 378 HAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREAL 437
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M ++G +P +++SV +A G +E+G K + + G + + + VD+
Sbjct: 438 EYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL 497
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVS----WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
++G +E+AE V +L + W ++L+ C H + R E +L+ + P+
Sbjct: 498 LGRAGHLEEAENV---ILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLK--LDPD 552
Query: 296 QVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
L++ + AG ++ + +M+K V E VD
Sbjct: 553 DDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 597
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 16/263 (6%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTAL----ASTGSLEQGKWVHAHVIKSGGQLVAFV 232
++AL + M+ +G YS VF L A SLEQG+ VHA ++KSG Q ++
Sbjct: 29 KEALGIMNTMILQGTR----VYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYL 84
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
NTL+ MYAK GS+ DA +VF+ + R++VSW +M+ + +E M G
Sbjct: 85 ENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P++VTF+ +L A ++ LL GQ + + G+E E + V + + G + +A
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV 204
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIY---A 408
+P E W L+ V++ A E + + + P+ I A+I
Sbjct: 205 IFDRLP-EKNVVTWTLLIAGYAQQGQVDV---ALELLETMQQAEVAPNKITFASILQGCT 260
Query: 409 SAGRLNDAARARKMMKESGVKKE 431
+ L + + + +SG +E
Sbjct: 261 TPAALEHGKKVHRYIIQSGYGRE 283
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/570 (42%), Positives = 372/570 (65%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
CT L L + +H+ ++ D+ + ++++ YAKC G +D++RK+F++MP ++
Sbjct: 259 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 318
Query: 59 VTWTALISGYSQNDQPEN-AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTA+I+ Y Q+ + + AI LF +M+ ++PN F+ SSVLKA G +D G QV+
Sbjct: 319 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-NLSDPYTGEQVY 377
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++ +K G VG+SL+ MYAR +M+DA F L KN VS+NA++ G+A+ + E
Sbjct: 378 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 437
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F+E+ G + F+++S+ + AS G++ +G+ +H ++K G + + N L+
Sbjct: 438 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 497
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VFN + R+V+SW SM+TG A+HG + F KML G PN++
Sbjct: 498 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 557
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH G++ EGQ +F ++ K+HG+ P HY VDLLGR+GLL A++FI
Sbjct: 558 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 617
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+ A VW LLGACR+H N ELG +AAE I E +P D +ILL+N++ASAG+ D
Sbjct: 618 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 677
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+ RK MKE + KE CSW+E +N VH F + +HPQ I+++ +++ KIK++GY+
Sbjct: 678 VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYI 737
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD+ VL +++++E L HSEK+A+AF LIST I I KN+RVCGDCH+A K+
Sbjct: 738 PDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYI 797
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S REI+VRD+NRFHH ++G CSC DYW
Sbjct: 798 SMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 191/358 (53%), Gaps = 8/358 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C + + ++VH ++ S + D + NT+++ Y+KCG + AR +F+ M K D+V+
Sbjct: 54 CIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVS 113
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+A++S ++ N AI F ML LG PN++ ++V++A + A G ++ F
Sbjct: 114 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRAC-SNANYAWVGEIIYGFV 172
Query: 121 LKYGY-DWNVYVGSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K GY + +V VG L+DM+ + + A+ +F + +N V+W +I A+
Sbjct: 173 VKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 232
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F +M G+ P F+YSSV +A G L GK +H+ VI+ G L VG +LVD
Sbjct: 233 AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVD 292
Query: 239 MYAK---SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAP 294
MYAK GS++D+ KVF ++ + +V+SW +++T Q G K + F KM+ I P
Sbjct: 293 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRP 352
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
N +F VL AC + G+ ++ K G+ + + + R+G ++ A K
Sbjct: 353 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARK 410
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 7/288 (2%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P T S+L S + + G+ VH ++ G + + V ++L+ +Y++ + A
Sbjct: 41 PPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARL 100
Query: 151 LFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + +K + VSW+A+++ A S +A+ TF +ML GF P + +++V A ++
Sbjct: 101 IFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 160
Query: 210 SLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSM 267
G+ ++ V+K+G + VG L+DM+ K SG + A KVF+++ +R++V+W M
Sbjct: 161 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 220
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+T AQ G + + F M +G P++ T+ VL+AC+ GLL G+ + + + G+
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280
Query: 328 EPEEAHYVTFVDLLGRA---GLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + VD+ + G +D + K +MP E W A++ A
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 327
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 14/223 (6%)
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A T M ++ P +YS + + + + GK VH +++SG +L + V NTL+
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+Y+K G E A +F + KRD+VSW++M++ A + + + F ML G PN+
Sbjct: 88 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGR-AGLLDRALKFIR 355
F V+ ACS+A G+ + + K G +E + +D+ + +G L A K
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207
Query: 356 EMPIEPTAAVWG------ALLGACR----MHKNVELGAYAAER 388
+MP E W A LG R + ++EL Y +R
Sbjct: 208 KMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR 249
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/565 (41%), Positives = 365/565 (64%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK + + HI+ + + +D ++ +L+ YAKCG L +A ++F+++ +++V W
Sbjct: 423 CSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAW 482
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ Y Q++Q +NA+ F +L+ G+KPN T +S+L + + + G+ VH +
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLE-LGKWVHFLIM 541
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +++V ++L+ M+ + A LF + ++ VSWN +IAG + + + A
Sbjct: 542 KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD 601
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P +++ + A AS +L +G+ +HA + ++ VG L+ MY
Sbjct: 602 YFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYT 661
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA +VF++L K++V SW SM+TG AQHG GK + F +M + G+ P+ +TF+
Sbjct: 662 KCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVG 721
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+AC+HAGL++EG +F MK+ +EP HY VDL GRAGLL+ A++FI +M +EP
Sbjct: 722 ALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEP 781
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ VWGALLGAC++H NVEL AA++ ELDP+D+G ++L+NIYA+AG + A+ RK
Sbjct: 782 DSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRK 841
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M + GV K+P SW+E VH F ++D HPQ IH + + +++Q+GYVPD+ +
Sbjct: 842 VMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRY 901
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + E+E L HSE+LA+ + L+ TPP + I I KN+RVCGDCH+A KF SK+ +
Sbjct: 902 VLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITK 961
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+II RD+NRFHHF+DG CSCGD+W
Sbjct: 962 RQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 208/379 (54%), Gaps = 2/379 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + ++ HI S + DI M NT++N YAKCG A+++FD+M KD+ +W
Sbjct: 120 CIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSW 179
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ GY Q+ E A L QM++ +KP++ T S+L A DK GR+++ L
Sbjct: 180 NLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK-GRELYNLIL 238
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D +++VG++L++M+ + + DA +F L +++ V+W ++I G AR ++A
Sbjct: 239 KAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACN 298
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M EG +P ++ S+ A +LEQGK VHA + + G +VG ++ MY
Sbjct: 299 LFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYT 358
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VF+ + R+VVSW +M+ G AQHG +F KM+ +GI PN+VTF+
Sbjct: 359 KCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMS 418
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L ACS L GQ + + G ++ + + + G L A + ++ +
Sbjct: 419 ILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQN 478
Query: 362 TAAVWGALLGACRMHKNVE 380
A W A++ A H+ +
Sbjct: 479 VVA-WNAMITAYVQHEQYD 496
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 209/375 (55%), Gaps = 2/375 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + R ++ IL + + D+ + ++N + KCG + +A K+FD +P +D+VTW
Sbjct: 221 CADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTW 280
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+G +++ + + A LF +M G++P++ S+L+A ++ G++VHA
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ-GKKVHARMK 339
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+D +YVG+++L MY + M+DA +F ++ +N VSW A+IAG A+ ++A
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M+ G EP ++ S+ A +S +L++G+ + H+I++G V L+ MYA
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS++DA +VF ++ K++VV+WN+M+T QH + F+ +L+ GI PN TF
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L C + L+ G+ L+ K G+E + V + G L A +MP
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 362 TAAVWGALLGACRMH 376
+ W ++ H
Sbjct: 580 LVS-WNTIIAGFVQH 593
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 200/438 (45%), Gaps = 67/438 (15%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D N +LN +K G +EA ++ + + ++ I Y Q +S +L
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVD-------SSHIQIYRQT---------YSALL 117
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+L +K K G G +++ K G ++++ ++L++MYA+
Sbjct: 118 QLCIK---------FKNLGDG-------ERIYNHIKKSGVQPDIFMWNTLINMYAKCGNT 161
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F + K+ SWN L+ G+ + E+A + +M+++ +P ++ S+ A
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A ++++G+ ++ ++K+G FVG L++M+ K G I DA KVF+ L RD+V+W
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
SM+TG A+HG K F++M G+ P++V F+ +L AC+H L++G+ A MK+
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV 341
Query: 326 GVEPE-----------------EAHYVTFVDLLGRA--------------GLLDRALKFI 354
G + E E F + GR G +D A F
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 355 REM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASA 410
+M IEP + ++LGAC ++ G + I E D L ++YA
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 411 GRLNDAARARKMMKESGV 428
G L DA R + + + V
Sbjct: 462 GSLKDAHRVFEKISKQNV 479
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/567 (42%), Positives = 353/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK + +H + + +D++ +++ YAKCG A F+ M +D+VTW
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+GY+Q P NAI +F ++ + P+ T+ V+ A A D G +H +
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC-ALLNDLDQGTCIHGLIV 558
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
K G++ + +V ++L+DMYA+ + A FLF + +K+EV+WN +IA + + ++A+
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+F +M E F P ++ SV A A + +G HA +I+ G VGN+L+DMY
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMY 678
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + +EK+FN + +D VSWN+ML+G A HG G + F M + + + V+F+
Sbjct: 679 AKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV 738
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+AC H GL++EG+ F ++ K+ ++P+ HY VDLLGRAGL D L FI+ MP+
Sbjct: 739 SVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPV 798
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP A VWGALLG+CRMH NV+LG A + + +L+P + ++L++IYA +GR DA +A
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKA 858
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M + G+KK P CSWVE KN VH F D +HPQ +H W + EK+++IGYVPD
Sbjct: 859 RSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDR 918
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL +++++E L HSE+LA+ FAL++TPPGSTI I KN+RVC DCH+ KF SK+
Sbjct: 919 SCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKI 978
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD RFHHF DG CSC DYW
Sbjct: 979 TTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 183/368 (49%), Gaps = 3/368 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L ++ R +H ++ F + A+ N +++ Y+KCG +D AR++FD+M +D V+W +
Sbjct: 243 LSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTM 300
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++GY+ N + LF +M ++ N+ + S A+ A D + G+++H L+
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAA-AETIDLEKGKEIHGCALQQR 359
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D ++ V + L+ MYA+ + + A LF L+ ++ V+W+A+IA + E+AL F
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM + +P + S+ A A L+ GK +H +K+ G LV MYAK G
Sbjct: 420 EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG 479
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
A FNR+ RD+V+WNS++ G AQ G + F K+ + I P+ T + V+
Sbjct: 480 FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVP 539
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+ LD+G L+ K G E + +D+ + G L A +
Sbjct: 540 ACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Query: 365 VWGALLGA 372
W ++ A
Sbjct: 600 TWNVIIAA 607
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 180/371 (48%), Gaps = 4/371 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+E H I + D+ + +++ Y+K G L AR++FD+MP +D+V W
Sbjct: 139 CTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAW 198
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G SQ++ P A+ F M +G++P+ +L ++ ++ + R +H +
Sbjct: 199 NAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI-CKLSNIELCRSIHGYVF 257
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D++ V + L+D+Y++ +D A +F + +++VSW ++AG+A + L
Sbjct: 258 R--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLE 315
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M S S F A A T LE+GK +H ++ V L+ MYA
Sbjct: 316 LFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYA 375
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G E A+++F L RD+V+W++++ Q G + + F++M + PN+VT +
Sbjct: 376 KCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMS 435
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ LL G+ K ++ + + V + + G AL M
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SR 494
Query: 362 TAAVWGALLGA 372
W +L+
Sbjct: 495 DIVTWNSLING 505
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 173/315 (54%), Gaps = 7/315 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + +HA I+ S FK+ ++ + ++N Y+ D AR +FD P + W
Sbjct: 42 CKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILW 97
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y+++ Q A+ ++ M+ GL+P+++T + VLKA GA + + G H
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKAC-TGALNLQEGVWFHGEID 156
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + +V++G+ L+DMY++ + A +F + ++ V+WNA+IAG ++ + +A+
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G EP+ S ++F + ++E + +H +V + + V N L+D+Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYS 274
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF++++ +D VSW +M+ G A +G + F+KM + N+V+ +
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 302 VLTACSHAGLLDEGQ 316
A + L++G+
Sbjct: 335 AFLAAAETIDLEKGK 349
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 135/266 (50%), Gaps = 20/266 (7%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA + G+ + + + L+++Y+ F + D A +F + + + + WN++I + R
Sbjct: 50 QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ +AL + M+ +G EP ++++ V A +L++G W H + + G + F+G
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LVDMY+K G ++ A +VF+++ KRDVV+WN+M+ G +Q V +F M G+ P
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228
Query: 295 NQVTFLCV---LTACSHAGLLDEGQGY-----FALMKKHGVEPEEAHYVTFVDLLGRAGL 346
+ V+ L + + S+ L GY F+ +G+ +DL + G
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL----------IDLYSKCGD 278
Query: 347 LDRALKFIREMPIEPTAAVWGALLGA 372
+D A + +M ++ WG ++
Sbjct: 279 VDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/579 (42%), Positives = 370/579 (63%), Gaps = 19/579 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L R+ H F+ D+ + + +++ Y+KCG L +AR LFDE+P++++V+W
Sbjct: 2025 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 2084
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKP---NQFTLSSVL---------KASGAGATD 109
T++I+GY QN+Q +NA++LF L + N L SV+ + SG G T+
Sbjct: 2085 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 2144
Query: 110 DKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG 169
VH F +K G+D ++ VG++L+D YA+ Q + +F +E K+++SWN++IA
Sbjct: 2145 G-----VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 2199
Query: 170 HARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+A+ +AL F M+R G + S+V A A G+L GK +H VIK +
Sbjct: 2200 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 2259
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
VG +++DMY K G +E A+K F+R+ +++V SW +M+ G HG K + F KM+
Sbjct: 2260 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 2319
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLL 347
R G+ PN +TF+ VL ACSHAGL++EG +F MK K+ +EP HY VDL GRAG L
Sbjct: 2320 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 2379
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIY 407
+ A I+ M ++P VWG+LLGACR+HKNV+LG AA+++FELDP + G ++LL+N+Y
Sbjct: 2380 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 2439
Query: 408 ASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREIS 467
A AGR D R R +MK + K P S VE K VH+F+ D HP MI+K +++
Sbjct: 2440 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 2499
Query: 468 EKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCG 527
++++IGYVP+ + VL D++E+E L+VHSEKLA+AF ++++ PG+TI+I KN+RVCG
Sbjct: 2500 LELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCG 2559
Query: 528 DCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
DCH+ K SK+V R+ +VRD+ RFHHF+DG CSCGDYW
Sbjct: 2560 DCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 33/384 (8%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K K R +HA I+ S ND + +++ Y+ G + A LF ++ TW +I
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ N E A++L+ M+ G+ ++FT V+KA + D G+ VH +KYG+
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSID-LGKVVHGSLIKYGF 156
Query: 126 DWNVYVGSSLLDMYAR----------FDQM---------------------DDAWFLFTA 154
+V+V ++L+D Y + F++M +A +F
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ SKN VSW A+I G+ R + E+AL F M E P ++ S+ A G L G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ +H + IK+ ++ ++G L+DMY+K GSI+DA +VF + ++ + +WNSM+T H
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAH 333
GLG+ + F +M R + P+ +TF+ VL AC H + EG YF M +H G+ P H
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396
Query: 334 YVTFVDLLGRAGLLDRALKFIREM 357
Y +L R+ LD A K +E+
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEV 420
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 163/326 (50%), Gaps = 11/326 (3%)
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++I+ ++ A+ FS + +LGL P + + +K+ A D GR H
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA-LCDLVSGRMSHQQ 2040
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+G++ +++V S+L+DMY++ Q+ DA LF + +N VSW ++I G+ + + + A
Sbjct: 2041 AFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 2100
Query: 180 LRTFSEMLREGFEPTHFSY----SSVFTALASTGSLEQGK----WVHAHVIKSGGQLVAF 231
L F + L E E + S V ++ S S GK VH V+K G
Sbjct: 2101 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 2160
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN- 290
VGNTL+D YAK G ++KVF+ + ++D +SWNSM+ AQ GL + F M+R+
Sbjct: 2161 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 2220
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G+ N VT VL AC+HAG L G+ + K +E + +D+ + G ++ A
Sbjct: 2221 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMA 2280
Query: 351 LKFIREMPIEPTAAVWGALLGACRMH 376
K M E W A++ MH
Sbjct: 2281 KKTFDRMK-EKNVKSWTAMVAGYGMH 2305
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 37/284 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT+ + ++VH ++ F D+ +QN +++ Y KCG A K+F++M V+++V+W
Sbjct: 135 CTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSW 194
Query: 62 T-------------------------------ALISGYSQNDQPENAIILFSQMLRLGLK 90
T A+I+GY +N QPE A+ LF +M +
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN++T+ S++KA GR +H + +K + VY+G++L+DMY++ + DA
Sbjct: 255 PNEYTMVSLIKACTEMGI-LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + K+ +WN++I G++AL FSEM R +P ++ V A +
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 211 LEQGKWVHAHVIKSGGQLVAFVG---NTLVDMYAKSGSIEDAEK 251
+++G + + G +A + + ++YA+S ++++A K
Sbjct: 374 VKEGCAYFTRMTQHYG--IAPIPEHYECMTELYARSNNLDEAFK 415
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 32/294 (10%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
RQ+HA ++ G + + L+ +Y+ ++ A LF +++ +WN +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
E+AL + M+ +G F++ V A + S++ GK VH +IK G FV
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG------------LGKATV 281
N L+D Y K G A KVF ++ R+VVSW ++++G G K V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 282 RW-------------------FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
W F++M I PN+ T + ++ AC+ G+L G+G
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
K+ +E +D+ + G + A++ MP + W +++ + +H
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH 336
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 141/334 (42%), Gaps = 44/334 (13%)
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
R D + A + + ++ N SWN++IA AR + +ALR FS + + G PT S+
Sbjct: 1960 GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFP 2019
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
+ ++ L G+ H G + FV + L+DMY+K G ++DA +F+ + R
Sbjct: 2020 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 2079
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLR--------NGIAPNQVTFLCVLTACSHAGL 311
+VVSW SM+TG Q+ + F+ L N + + V + VL+ACS
Sbjct: 2080 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 2139
Query: 312 LDEGQGYFALMKKHGV-------------------------------EPEEAHYVTFVDL 340
+G + K G E ++ + + + +
Sbjct: 2140 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 2199
Query: 341 LGRAGLLDRALK----FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD-PH 395
++GL AL+ +R + + A A+L AC + G +++ ++D +
Sbjct: 2200 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 2259
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
+ + ++Y GR+ A + MKE VK
Sbjct: 2260 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/569 (41%), Positives = 368/569 (64%), Gaps = 4/569 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + ++E + VHAH++ + + + ++ ++ Y KC L +AR +FD MP +++V+
Sbjct: 67 ECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVS 126
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+IS YSQ A+ LF QMLR G +PN+FT ++VL S G++ GRQ+H+
Sbjct: 127 WTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVL-TSCIGSSGFVLGRQIHSHI 185
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ +VYVGSSLLDMYA+ ++ +A +F L ++ VS A+I+G+A+ E+AL
Sbjct: 186 IKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEAL 245
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + REG + + +Y+SV TAL+ +L+ GK VH H+++S + N+L+DMY
Sbjct: 246 ELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMY 305
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTF 299
+K G++ A ++F+ L +R V+SWN+ML G ++HG G+ + F M+ N + P+ VT
Sbjct: 306 SKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTV 365
Query: 300 LCVLTACSHAGLLDEGQGYFALMK--KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL+ CSH GL D+G F M K V+P+ HY VD+LGRAG ++ A +F+++M
Sbjct: 366 LAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKM 425
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P EP+AA+WG LLGAC +H N+++G + ++ +++P ++G +++L+N+YASAGR D
Sbjct: 426 PFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVR 485
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R +M + V KEP SW+E +H F A+D +HP+R + K +E+S + K+ GYVP
Sbjct: 486 SLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVP 545
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D S VL D++++E L HSEKLAL F LI+TP I + KN+R+C DCH+ K+ S
Sbjct: 546 DLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTS 605
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ RE+ +RD NRFH G CSCGDYW
Sbjct: 606 KIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M G + Y++V ++ +G+ VHAH+IK+ ++ L+ Y K S
Sbjct: 49 MALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDS 108
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ DA VF+ + +R+VVSW +M++ +Q G + F +MLR+G PN+ TF VLT+
Sbjct: 109 LRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTS 168
Query: 306 C 306
C
Sbjct: 169 C 169
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/574 (43%), Positives = 368/574 (64%), Gaps = 9/574 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L R+ H F+ D+ + + +++ Y+KCG L +AR LFDE+P++++V+W
Sbjct: 1152 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 1211
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKP---NQFTLSSVLKASGAGATDDKFGRQ--- 115
T++I+GY QN+Q +NA++LF L + N L SV+ S A G+
Sbjct: 1212 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 1271
Query: 116 -VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
VH F +K G+D ++ VG++L+D YA+ Q + +F +E K+++SWN++IA +A+
Sbjct: 1272 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 175 EGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL F M+R G + S+V A A G+L GK +H VIK + VG
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+++DMY K G +E A+K F+R+ +++V SW +M+ G HG K + F KM+R G+
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN +TF+ VL ACSHAGL++EG +F MK K+ +EP HY VDL GRAG L+ A
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
I+ M ++P VWG+LLGACR+HKNV+LG AA+++FELDP + G ++LL+N+YA AGR
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
D R R +MK + K P S VE K VH+F+ D HP MI+K +++ ++++
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQK 1631
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
IGYVP+ + VL D++E+E L+VHSEKLA+AF ++++ PG+TI+I KN+RVCGDCH+
Sbjct: 1632 IGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTV 1691
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK+V R+ +VRD+ RFHHF+DG CSCGDYW
Sbjct: 1692 IKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 33/384 (8%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K K R +HA I+ S ND + +++ Y+ G + A LF ++ TW +I
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ N E A++L+ M+ G+ ++FT V+KA + D G+ VH +KYG+
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSID-LGKVVHGSLIKYGF 156
Query: 126 DWNVYVGSSLLDMYAR----------FDQM---------------------DDAWFLFTA 154
+V+V ++L+D Y + F++M +A +F
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ SKN VSW A+I G+ R + E+AL F M E P ++ S+ A G L G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ +H + IK+ ++ ++G L+DMY+K GSI+DA +VF + ++ + +WNSM+T H
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAH 333
GLG+ + F +M R + P+ +TF+ VL AC H + EG YF M +H G+ P H
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396
Query: 334 YVTFVDLLGRAGLLDRALKFIREM 357
Y +L R+ LD A K +E+
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEV 420
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 163/326 (50%), Gaps = 11/326 (3%)
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++I+ ++ A+ FS + +LGL P + + +K+ A D GR H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA-LCDLVSGRMSHQQ 1167
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+G++ +++V S+L+DMY++ Q+ DA LF + +N VSW ++I G+ + + + A
Sbjct: 1168 AFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 1227
Query: 180 LRTFSEMLREGFEPTHFSY----SSVFTALASTGSLEQGK----WVHAHVIKSGGQLVAF 231
L F + L E E + S V ++ S S GK VH V+K G
Sbjct: 1228 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 1287
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN- 290
VGNTL+D YAK G ++KVF+ + ++D +SWNSM+ AQ GL + F M+R+
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 1347
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G+ N VT VL AC+HAG L G+ + K +E + +D+ + G ++ A
Sbjct: 1348 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMA 1407
Query: 351 LKFIREMPIEPTAAVWGALLGACRMH 376
K M E W A++ MH
Sbjct: 1408 KKTFDRMK-EKNVKSWTAMVAGYGMH 1432
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 142/284 (50%), Gaps = 37/284 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT+ + ++VH ++ F D+ +QN +++ Y KCG A K+F++M V+++V+W
Sbjct: 135 CTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSW 194
Query: 62 T-------------------------------ALISGYSQNDQPENAIILFSQMLRLGLK 90
T A+I+GY +N QPE A+ LF +M +
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN++T+ S++KA GR +H + +K + VY+G++L+DMY++ + DA
Sbjct: 255 PNEYTMVSLIKACTEMGI-LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + K+ +WN++I G++AL FSEM R +P ++ V A +
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 211 LEQGKWVHAHVIKSGGQLVAFVG---NTLVDMYAKSGSIEDAEK 251
+++G + + G +A + + ++YA+S ++++A K
Sbjct: 374 VKEGCAYFTRMTQHYG--IAPIPEHYECMTELYARSNNLDEAFK 415
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 32/294 (10%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
RQ+HA ++ G + + L+ +Y+ ++ A LF +++ +WN +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
E+AL + M+ +G F++ V A + S++ GK VH +IK G FV
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG------------LGKATV 281
N L+D Y K G A KVF ++ R+VVSW ++++G G K V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 282 RW-------------------FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
W F++M I PN+ T + ++ AC+ G+L G+G
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
K+ +E +D+ + G + A++ MP + W +++ + +H
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH 336
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 45/326 (13%)
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
WF + ++ N SWN++IA AR + +ALR FS + + G PT S+ + ++
Sbjct: 1096 TWF-YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
L G+ H G + FV + L+DMY+K G ++DA +F+ + R+VVSW SM
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214
Query: 268 LTGCAQHGLGKATVRWFEKMLR--------NGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+TG Q+ + F+ L N + + V + VL+ACS +G
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274
Query: 320 ALMKKHGV-------------------------------EPEEAHYVTFVDLLGRAGLLD 348
+ K G E ++ + + + + ++GL
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334
Query: 349 RALK----FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD-PHDSGPHILL 403
AL+ +R + + A A+L AC + G +++ ++D ++ +
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 1394
Query: 404 ANIYASAGRLNDAARARKMMKESGVK 429
++Y GR+ A + MKE VK
Sbjct: 1395 IDMYCKCGRVEMAKKTFDRMKEKNVK 1420
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/560 (43%), Positives = 350/560 (62%), Gaps = 3/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + +H + + + F + + + + Y+KCG ++ AR +FD M K +V+W +++ G
Sbjct: 264 LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDG 323
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN +PE AI +F +ML G+ P T+ L A A D + G+ VH F +
Sbjct: 324 YVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHAC-ADLGDLERGKFVHKFVDQLNLGS 382
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++ V +SL+ MY++ ++D A +F L + VSWNA+I G+A+ +AL FSEM
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G +P F+ SV ALA KW+H +I+S FV LVDMY+K G+I
Sbjct: 443 SLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIH 502
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A K+F+ + R V++WN+M+ G HGLG+A + F+KM + + PN +T+L V++ACS
Sbjct: 503 MARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACS 562
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+DEG +F MK+ +G+EP HY VDLLGRAG + A FI MPI P V+
Sbjct: 563 HSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GA GAC++HKN+E+G AA+++FEL+P + G H+LLANIYAS + + A RK M++
Sbjct: 623 GAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKK 682
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+KK P CS VE +N VH F + HPQ I+ E+ +IK GYVPD++ +L
Sbjct: 683 GLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVE 742
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D + E L HSEKLA+AF L++T PG+TIH++KN+RVCGDCH+A K+ S V REIIV
Sbjct: 743 DDVQ-EQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIV 801
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF++G CSCGDYW
Sbjct: 802 RDMQRFHHFKNGICSCGDYW 821
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 172/315 (54%), Gaps = 4/315 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +K+L + + ++ + N+ Q +++ ++K G ++EA ++F+ + K +
Sbjct: 59 CTSMKELHQ---IIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ GY++N E A+ +M +KP + + +LK G A D K G+++H +
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA-DLKRGKEIHGQLI 174
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ NV+ + +++MYA+ Q+DDA+ +F + ++ VSWN +IAG ++ +KAL
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M EG P + +V A A G L GK +H + I++G + + L DMY+
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E A +F+ + ++ VVSWNSM+ G Q+G + + FEKML GI P VT +
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354
Query: 302 VLTACSHAGLLDEGQ 316
L AC+ G L+ G+
Sbjct: 355 ALHACADLGDLERGK 369
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 147/276 (53%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + VH + +DI++ N++++ Y+KC +D A +F+ + + V+W
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY+QN + A+ FS+M LG+KP+ FT+ SV+ A A + + + +H +
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPAL-AELSVTRHAKWIHGLII 477
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D N++V ++L+DMY++ + A LF + ++ ++WNA+I G+ G AL
Sbjct: 478 RSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALD 537
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F +M + EP +Y SV +A + +G +++G H +K L + + +VD+
Sbjct: 538 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEG-LRHFKSMKQDYGLEPSMDHYGAMVDL 596
Query: 240 YAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
++G I++A + + N + + + + C H
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIH 632
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L + A+ +H I+ S +I + +++ Y+KCG + ARKLFD + + ++TW A+
Sbjct: 463 LSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAM 522
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY + A+ LF +M + ++PN T SV+ A D+ R + YG
Sbjct: 523 IDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYG 582
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG----HARKSEGEKAL 180
+ ++ +++D+ R ++ +AW + ++ G H GEKA
Sbjct: 583 LEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAA 642
Query: 181 RTFSEM 186
+ E+
Sbjct: 643 KKLFEL 648
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/565 (41%), Positives = 373/565 (66%), Gaps = 2/565 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T+ + L+ + VH I + + + + +++ YAKCG + +A+ +FD++P K++VTWT
Sbjct: 208 TNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWT 267
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
LI+GY+Q Q + A+ L +M + + PN+ T +S+L+ + G++VH + ++
Sbjct: 268 LLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH-GKKVHRYIIQ 326
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GY ++V ++L+ MY + + +A LF L ++ V+W A++ G+A+ ++A+
Sbjct: 327 SGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDL 386
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F M ++G +P +++S T+ +S L++GK +H ++ +G L ++ + LV MYAK
Sbjct: 387 FRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAK 446
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
GS++DA VFN++ +R+VV+W +M+TGCAQHG + + +FE+M + GI P++VTF V
Sbjct: 447 CGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSV 506
Query: 303 LTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+AC+H GL++EG+ +F ++ +G++P HY FVDLLGRAG L+ A I MP +P
Sbjct: 507 LSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQP 566
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+VWGALL ACR+H +VE G AAE + +LDP D G ++ L+NIYA+AGR DA + R+
Sbjct: 567 GPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQ 626
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M++ V KEP SW+E VH+F D +HP+ I+ + +++E+IK+ GYVPD+
Sbjct: 627 VMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRF 686
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL D++++ L HSE+LA+ + L+ TPPG+ I I KN+RVCGDCH+A KF SKVV
Sbjct: 687 VLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVG 746
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REII RD +RFHHF DG CSCGD+W
Sbjct: 747 REIIARDAHRFHHFVDGVCSCGDFW 771
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 199/376 (52%), Gaps = 2/376 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L+ L++ R VHA IL S + + ++NT+L+ YAKCG L +AR++FD + +++V+
Sbjct: 105 ECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVS 164
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I + +Q A + M G KP++ T S+L A + G++VH
Sbjct: 165 WTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAF-TNPELLQVGQKVHMEI 223
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G + VG+SL+ MYA+ + A +F L KN V+W LIAG+A++ + + AL
Sbjct: 224 AKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVAL 283
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+M + P +Y+S+ + +LE GK VH ++I+SG +V N L+ MY
Sbjct: 284 ELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMY 343
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +++A K+F L RDVV+W +M+TG AQ G + F +M + GI P+++TF
Sbjct: 344 CKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFT 403
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
LT+CS L EG+ + G + V + + G +D A +M E
Sbjct: 404 SALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS-E 462
Query: 361 PTAAVWGALLGACRMH 376
W A++ C H
Sbjct: 463 RNVVAWTAMITGCAQH 478
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 163/290 (56%), Gaps = 3/290 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+ + VH +I+ S + +I + N ++ Y KCG L EARKLF ++P +D+VTW
Sbjct: 308 CTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTW 367
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++GY+Q + AI LF +M + G+KP++ T +S L + + A + G+ +H +
Sbjct: 368 TAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQE-GKSIHQQLV 426
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY +VY+ S+L+ MYA+ MDDA +F + +N V+W A+I G A+ +AL
Sbjct: 427 HAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALE 486
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M ++G +P +++SV +A G +E+G K + + G + + + VD+
Sbjct: 487 YFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLL 546
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
++G +E+AE V + + W ++L+ C H + R E +L+
Sbjct: 547 GRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLK 596
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 28/285 (9%)
Query: 127 WNVYV-----GSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNA------------LIA 168
WN V G S+L M+ R+ +D A+ L T S +++ NA ++
Sbjct: 11 WNSRVTQLRCGRSIL-MFNRYQSNVDTAFELTTPTVSHDQLPGNAGFRKVDTLANSGDVS 69
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL----ASTGSLEQGKWVHAHVIKS 224
++ ++AL + M+ +G YS VF L A SLEQG+ VHA ++KS
Sbjct: 70 ILCKQGRLKEALGILNTMILQGTR----VYSDVFRGLLQECARLRSLEQGREVHAAILKS 125
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
G Q ++ NTL+ MYAK GS+ DA +VF+ + R++VSW +M+ + +
Sbjct: 126 GIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCY 185
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
E M G P++VTF+ +L A ++ LL GQ + K G+E E + V + +
Sbjct: 186 ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKC 245
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
G + +A ++P E W L+ V++ E++
Sbjct: 246 GDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKM 289
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/565 (41%), Positives = 364/565 (64%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK + + HI+ + + +D ++ +L+ YAKCG L +A ++F+++ +++V W
Sbjct: 423 CSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAW 482
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ Y Q++Q +NA+ F +L+ G+KPN T +S+L + + + G+ VH +
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLE-LGKWVHFLIM 541
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +++V ++L+ M+ + A LF + ++ VSWN +IAG + + + A
Sbjct: 542 KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD 601
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P +++ + A AS +L +G+ +HA + ++ VG L+ MY
Sbjct: 602 YFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYT 661
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA +VF++L K++V SW SM+ G AQHG GK + F +M + G+ P+ +TF+
Sbjct: 662 KCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVG 721
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+AC+HAGL++EG +F MK+ +EP HY VDL GRAGLL+ A++FI +M +EP
Sbjct: 722 ALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEP 781
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ VWGALLGAC++H NVEL AA++ ELDP+D+G ++L+NIYA+AG + A+ RK
Sbjct: 782 DSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRK 841
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M + GV K+P SW+E VH F ++D HPQ IH + + +++Q+GYVPD+ +
Sbjct: 842 VMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRY 901
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + E+E L HSE+LA+ + L+ TPP + I I KN+RVCGDCH+A KF SK+ +
Sbjct: 902 VLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITK 961
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+II RD+NRFHHF+DG CSCGD+W
Sbjct: 962 RQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 209/379 (55%), Gaps = 2/379 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + ++ HI S + DI M+NT++N YAKCG A+++FD+M KD+ +W
Sbjct: 120 CIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSW 179
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ GY Q+ E A L QM++ +KP++ T S+L A DK GR+++ L
Sbjct: 180 NLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK-GRELYNLIL 238
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D +++VG++L++M+ + + DA +F L +++ V+W ++I G AR ++A
Sbjct: 239 KAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACN 298
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M EG +P ++ S+ A +LEQGK VHA + + G +VG ++ MY
Sbjct: 299 LFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYT 358
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VF+ + R+VVSW +M+ G AQHG +F KM+ +GI PN+VTF+
Sbjct: 359 KCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMS 418
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L ACS L GQ + + G ++ + + + G L A + ++ +
Sbjct: 419 ILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQN 478
Query: 362 TAAVWGALLGACRMHKNVE 380
A W A++ A H+ +
Sbjct: 479 VVA-WNAMITAYVQHEQYD 496
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 209/375 (55%), Gaps = 2/375 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + R ++ IL + + D+ + ++N + KCG + +A K+FD +P +D+VTW
Sbjct: 221 CADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTW 280
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+G +++ + + A LF +M G++P++ S+L+A ++ G++VHA
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ-GKKVHARMK 339
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+D +YVG+++L MY + M+DA +F ++ +N VSW A+IAG A+ ++A
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFL 399
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M+ G EP ++ S+ A +S +L++G+ + H+I++G V L+ MYA
Sbjct: 400 FFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS++DA +VF ++ K++VV+WN+M+T QH + F+ +L+ GI PN TF
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L C + L+ G+ L+ K G+E + V + G L A +MP
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 362 TAAVWGALLGACRMH 376
+ W ++ H
Sbjct: 580 LVS-WNTIIAGFVQH 593
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 200/438 (45%), Gaps = 67/438 (15%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D N +LN +K G +EA ++ + + ++ I Y Q +S +L
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVD-------SSHIQIYRQT---------YSALL 117
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+L +K K G G +++ K G ++++ ++L++MYA+
Sbjct: 118 QLCIK---------FKNLGDG-------ERIYNHIKKSGVQPDIFMRNTLINMYAKCGNT 161
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F + K+ SWN L+ G+ + E+A + +M+++ +P ++ S+ A
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A ++++G+ ++ ++K+G FVG L++M+ K G I DA KVF+ L RD+V+W
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
SM+TG A+HG K F++M G+ P++V F+ +L AC+H L++G+ A MK+
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV 341
Query: 326 GVEPE-----------------EAHYVTFVDLLGRA--------------GLLDRALKFI 354
G + E E F + GR G +D A F
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 355 REM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASA 410
+M IEP + ++LGAC ++ G + I E D L ++YA
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 411 GRLNDAARARKMMKESGV 428
G L DA R + + + V
Sbjct: 462 GSLKDAHRVFEKISKQNV 479
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/589 (42%), Positives = 368/589 (62%), Gaps = 26/589 (4%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-------------------- 42
T K A+ +HA ++ F D+ N ++N Y+K
Sbjct: 87 TLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYS 146
Query: 43 --LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
+D RKLFD MPV+D+V+W +I+G +QN E A+ + +M + L+P+ FTLSS+L
Sbjct: 147 VKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSIL 206
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
A K G+++H + +++G+D +V++GSSL+DMYA+ Q++ + F L +++
Sbjct: 207 PIFTEHANVTK-GKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
+SWN++IAG + ++ L F ML+E +P S+SSV A A +L GK +HA+
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAY 325
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR--LLKRDVVSWNSMLTGCAQHGLGK 278
+I+ G F+ ++L+DMYAK G+I+ A +FN+ + RD+VSW +++ GCA HG
Sbjct: 326 IIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHAL 385
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTF 337
V FE+ML +G+ P V F+ VLTACSHAGL+DEG YF M++ GV P HY
Sbjct: 386 DAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAV 445
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
DLLGRAG L+ A FI M EPT +VW LL ACR HKN+EL +I +DP +
Sbjct: 446 ADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNM 505
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
G H++++NIY++A R DAA+ R M+++G+KK PACSW+E N VH F+A D +HP
Sbjct: 506 GAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYD 565
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
I++ + E++++ GYV D++ VL D++ + L+ HSE+LA+AF +IST G+TI
Sbjct: 566 KINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTI 625
Query: 518 HIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ KNIRVC DCH+A KF +K+V REIIVRD +RFHHF++G CSCGDYW
Sbjct: 626 RVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 171/341 (50%), Gaps = 24/341 (7%)
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+ W +I Y+ + +++ F+ + G+ P++ S+L+AS + + +HA
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFN-LAQSLHA 100
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFD----------------------QMDDAWFLFTALE 156
++ G+ +++Y ++L++MY++F ++D LF +
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
++ VSWN +IAG+A+ E+AL EM +E P F+ SS+ ++ +GK
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKE 220
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H + I+ G F+G++L+DMYAK +E + F+ L RD +SWNS++ GC Q+G
Sbjct: 221 IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGR 280
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ +F +ML+ + P QV+F V+ AC+H L+ G+ A + + G + + +
Sbjct: 281 FDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASS 340
Query: 337 FVDLLGRAGLLDRALKFIREMPI-EPTAAVWGALLGACRMH 376
+D+ + G + A ++ + + W A++ C MH
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMV 59
C HL L + +HA+I+ F ++ + +++L+ YAKCG + AR +F+ EM +DMV
Sbjct: 310 CAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMV 369
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WTA+I G + + +A+ LF +ML G+KP +VL A D+ + ++
Sbjct: 370 SWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSM 429
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEK 178
+G + +++ D+ R ++++A+ F+ E W+ L+A E
Sbjct: 430 QRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIEL 489
Query: 179 ALRTFSEML--REGFEPTHFSYSSVFTA 204
A + +++L G H S++++A
Sbjct: 490 AEKVVNKILLVDPGNMGAHVIMSNIYSA 517
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/481 (18%), Positives = 168/481 (34%), Gaps = 93/481 (19%)
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
T + + ++W +I +A +L +F+ + G P + S+ A
Sbjct: 34 TTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFN 93
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAK----------------------SGSIEDAE 250
+ +HA VI+ G + N L++MY+K S I+
Sbjct: 94 LAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVR 153
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
K+F+R+ RDVVSWN+++ G AQ+G+ + + ++M + + P+ T +L +
Sbjct: 154 KLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHA 213
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA-------------------------- 344
+ +G+ +HG + + + +D+ +
Sbjct: 214 NVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIA 273
Query: 345 -----GLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
G D+ L F R M ++P + +++ AC + LG I L D
Sbjct: 274 GCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLG-FD 332
Query: 397 SGPHIL--LANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM--------- 445
I L ++YA G + AR + + + SW M
Sbjct: 333 DNKFIASSLLDMYAKCGNIK---MARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVS 389
Query: 446 ----------------FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
F+A A ++ + W+ + + G P H + AD
Sbjct: 390 LFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLL 449
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
R +L+ E + P GS + + H + A KVV + ++V
Sbjct: 450 GRAGRLE---EAYDFISNMGEEPTGS---VWSTLLAACRAHKNIELAEKVVNKILLVDPG 503
Query: 550 N 550
N
Sbjct: 504 N 504
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/566 (42%), Positives = 371/566 (65%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +H+ + + F +DI +QN +++ Y++CG + +AR +FD+M KD+++W
Sbjct: 338 CVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISW 397
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G +++ A+ ++ +M + G++PN+ T +S+L A + A + +GR++H +
Sbjct: 398 TAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE-WGRRIHQQVV 456
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + +VG++L++MY+ + DA +F + ++ V++NA+I G+A + G++AL+
Sbjct: 457 EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALK 516
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + EG +P +Y ++ A A++GSLE + +H V K G VGN LV YA
Sbjct: 517 LFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYA 576
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS DA VF ++ KR+V+SWN+++ G AQHG G+ ++ FE+M G+ P+ VTF+
Sbjct: 577 KCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVS 636
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSHAGLL+EG+ YF M + + P HY VDLLGRAG LD A I+ MP +
Sbjct: 637 LLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQ 696
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+WGALLGACR+H NV + AAE +LD ++ ++ L+++YA+AG + AA+ R
Sbjct: 697 ANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLR 756
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M++ GV KEP SW++ + +H FVA D +HPQ I+ + ++ +K GYVPD+
Sbjct: 757 KLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTR 816
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V+ D+ E+E + HSE+LA+A+ LISTPPG+ IHI KN+RVC DCH+A KF SK+V
Sbjct: 817 SVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIV 876
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REII RD NRFHHF+DG CSCGDYW
Sbjct: 877 DREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 229/428 (53%), Gaps = 5/428 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R +H + + D+ + N ILN YAKCG ++EAR++FD+M K +V+W
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T I GY+ + E A +F +M + G+ PN+ T SVL A + A K+G+ VH+ L
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL-KWGKAVHSRIL 254
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ + VG++L+ MYA+ D +F L +++ ++WN +I G A E+A
Sbjct: 255 NAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASE 314
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+++M REG P +Y + A ++ +L GK +H+ V K+G V N L+ MY+
Sbjct: 315 VYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYS 374
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ GSI+DA VF++++++DV+SW +M+ G A+ G G + +++M + G+ PN+VT+
Sbjct: 375 RCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTS 434
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L ACS L+ G+ + + G+ + T V++ G + A + M I+
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQR 493
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDAARA 419
+ A++G H + +R+ E L P D +I + N A++G L A
Sbjct: 494 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAREI 552
Query: 420 RKMMKESG 427
++++ G
Sbjct: 553 HTLVRKGG 560
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 226/454 (49%), Gaps = 40/454 (8%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV- 59
+C +K L R VH HI+ D N ++N Y +CG ++EAR+++ ++ +
Sbjct: 32 RCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTV 91
Query: 60 -TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVH 117
+W A++ GY Q E A+ L QM + GL P++ T+ S L + + GA + +GR++H
Sbjct: 92 HSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALE--WGREIH 149
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++ G ++V V + +L+MYA+ +++A +F +E K+ VSW I G+A E
Sbjct: 150 FQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSE 209
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A F +M +EG P +Y SV A +S +L+ GK VH+ ++ +G + VG LV
Sbjct: 210 TAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALV 269
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MYAK GS +D +VF +L+ RD+++WN+M+ G A+ G + + +M R G+ PN++
Sbjct: 270 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKI 329
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHG------------------------------- 326
T++ +L AC ++ L G+ + + K G
Sbjct: 330 TYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM 389
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGA 383
V + + + L ++G AL +EM +EP + ++L AC +E G
Sbjct: 390 VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGR 449
Query: 384 YAAERIFELD-PHDSGPHILLANIYASAGRLNDA 416
+++ E D+ L N+Y+ G + DA
Sbjct: 450 RIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDA 483
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
E + A+ + ++G + Y + L G+ VH H+I+ + N
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62
Query: 235 TLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
L++MY + GSIE+A +V+ +L ++R V SWN+M+ G Q+G + ++ +M ++G+
Sbjct: 63 ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122
Query: 293 APNQVTFLCVLTACSHAGLLDEGQ 316
AP++ T + L++C G L+ G+
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGR 146
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/538 (44%), Positives = 350/538 (65%), Gaps = 9/538 (1%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N ++N Y K G L +A+ +FD+MP +++V+WT +IS YS + A+ MLR G++
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 91 PNQFTLSSVLKASGAGATDDKFG-RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
PN FT SSVL+A D F RQ+H +K G D +V+V S+L+D+Y+R+ ++++A
Sbjct: 64 PNMFTYSSVLRAC-----DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + + + V W+++IAG A+ S+G++ALR F M R GF + +SV A
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
LE G+ VH HV+K L+ + N L+DMY K GS+EDA VF R++++DV+SW++M+
Sbjct: 179 LLELGRQVHVHVLKYDQDLI--LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G AQ+G K ++ FE M GI PN VT + VL ACSHAGL++EG YF MK+ G++
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P HY +DLLGRAG L A+ I EM EP A W ALL ACR+H+NV++ +AA++
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I LDP D+G ++LL+NIYA+ R ND A R+ M G+KKEP CSW+E +H F+
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HPQ I+ + ++ K+ +GYVPD++ VL + ++ + L+ HSEKLA+ F L
Sbjct: 417 GDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGL 476
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+S P G TI I+KN+R+CGDCH K +K+ +R I++RD R+HHF+DG CSCGD+W
Sbjct: 477 MSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 155/281 (55%), Gaps = 7/281 (2%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H I+ +D+ +++ +++ Y++ G L+ A ++FDEM D+V W+++I+G++QN
Sbjct: 83 RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQN 142
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ A+ LF +M R G Q TL+SVL+A G + GRQVH LK YD ++ +
Sbjct: 143 SDGDEALRLFKRMKRAGFLAQQTTLTSVLRAC-TGLALLELGRQVHVHVLK--YDQDLIL 199
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++LLDMY + ++DA +F + K+ +SW+ +IAG A+ ++AL+ F M G
Sbjct: 200 NNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGI 259
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGSIEDA 249
+P + + V A + G +E+G + + H +K G ++D+ ++G + +A
Sbjct: 260 KPNYVTIVGVLFACSHAGLVEEGLY-YFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEA 318
Query: 250 EKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
+ N + + D V+W ++L C H + +++LR
Sbjct: 319 VDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR 359
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L L+ R VH H+L + D+ + N +L+ Y KCG L++A +F M KD+++W
Sbjct: 174 CTGLALLELGRQVHVHVL--KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+G +QN + A+ LF M LG+KPN T+ VL A ++ H+
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKE 291
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
+G D ++D+ R ++ +A L +E + + V+W AL+ + A+
Sbjct: 292 LFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAI 351
Query: 181 RTFSEMLR 188
++LR
Sbjct: 352 HAAKQILR 359
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
F+ N L++MY K G + DA+ VF+++ R+VVSW +M++ + L + + MLR
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G+ PN T+ VL AC GL + Q + ++K G++ + +D+ R G L+ A
Sbjct: 61 GVRPNMFTYSSVLRACD--GLFNLRQLHCCIIKI-GLDSDVFVRSALIDVYSRWGELENA 117
Query: 351 LKFIREMPIEPTAAVWGALLG----------ACRMHKNVELGAYAAER 388
L+ EM + VW +++ A R+ K ++ + A++
Sbjct: 118 LRVFDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQ 164
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/554 (44%), Positives = 351/554 (63%), Gaps = 5/554 (0%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA + S + + + IL+AY KCG + AR +FD MP K+ V+W A+I GY+QN
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF++M+ G+ ++ + L+A G G D+ G +VH ++ G D NV V +
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE--GMRVHELLVRIGLDSNVSVMN 301
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ MY++ ++D A +F L+ + +VSWNA+I G A+ E A+R F+ M E +P
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F+ SV ALA Q +W+H + I+ +V L+DMYAK G + A +F
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF 421
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N +R V++WN+M+ G HG GKA V FE+M GI PN+ TFL VL+ACSHAGL+D
Sbjct: 422 NSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ YF MK+ +G+EP HY T VDLLGRAG LD A FI++MP++P +V+GA+LGA
Sbjct: 482 EGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGA 541
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++HKNVEL +A++IFEL P + H+LLANIYA+A D AR R M+++G++K P
Sbjct: 542 CKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTP 601
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
S ++ KN +H F + H Q I+ + ++ E+IK +GYVPD+ + D + +
Sbjct: 602 GWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQ 661
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+AF LI T PG+TI IKKN+RVC DCH+A K S V REII+RD RF
Sbjct: 662 L-LNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRF 720
Query: 553 HHFRDGFCSCGDYW 566
HHF+DG CSCGDYW
Sbjct: 721 HHFKDGKCSCGDYW 734
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R VHA + ++ + N YAKC +AR++FD MPV+D V W
Sbjct: 69 CAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAW 128
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
AL++GY++N A+ + +M G +P+ TL SVL A R+ HAF
Sbjct: 129 NALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARA-LAACREAHAFA 187
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G + V V +++LD Y + + A +F + +KN VSWNA+I G+A+ + +AL
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ M+ EG + T S + A G L++G VH +++ G V N L+ MY
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K ++ A VF+ L +R VSWN+M+ GCAQ+G + VR F +M + P+ T +
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 301 CVLTA 305
V+ A
Sbjct: 368 SVIPA 372
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 4/311 (1%)
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
L + +++D P A+ F M G P T +S+LK A D GR VHA
Sbjct: 31 LRASAARSDLPA-ALAAFVAMSSAGAPPVLRTFTSLLKLCAARG-DLATGRAVHAQLAAR 88
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G D ++L +MYA+ + DA +F + ++ V+WNAL+AG+AR A+
Sbjct: 89 GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMV 148
Query: 184 SEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
M E G P + SV A A+ +L + HA I+SG + + V ++D Y K
Sbjct: 149 VRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCK 208
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G I A VF+ + ++ VSWN+M+ G AQ+G + + F +M+ G+ V+ L
Sbjct: 209 CGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L AC G LDEG L+ + G++ + + + + +D A E+ T
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRT 327
Query: 363 AAVWGALLGAC 373
W A++ C
Sbjct: 328 QVSWNAMILGC 338
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+A + A +S+ AL F M G P +++S+ A+ G L G+ VHA +
Sbjct: 28 HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G A L +MYAK DA +VF+R+ RD V+WN+++ G A++GL + +
Sbjct: 88 RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147
Query: 284 FEKML-RNGIAPNQVTFLCVL 303
+M G P+ +T + VL
Sbjct: 148 VVRMQEEEGERPDSITLVSVL 168
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/566 (42%), Positives = 358/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L +H ++ + F+ ++ + + +++ YAK G LD A + + D+V+W
Sbjct: 425 CTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSW 484
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALISGY+Q++ A+ F +ML G++ + SS + A AG GRQ+HA
Sbjct: 485 TALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISAC-AGIQALNQGRQIHAQSY 543
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY ++ +G++L+ +YAR ++ +A+ F +++K+ +SWN LI+G A+ E AL+
Sbjct: 544 VSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALK 603
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M R E + F++ S +A A+ +++QGK +HA +IK G V N L+ YA
Sbjct: 604 VFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYA 663
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA + F + +++ VSWN+M+TG +QHG G V FEKM + G PN VTF+
Sbjct: 664 KCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVG 723
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+ +G GYF M K+HG+ P+ AHY VDL+ RAG L RA KFI EMPIE
Sbjct: 724 VLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIE 783
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W LL AC +HKNVE+G +AA+ + EL+P DS ++LL+N+YA +G+ + + R
Sbjct: 784 PDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTR 843
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MM+ GVKKEP SW+E KN+VH F D HP I++ E+++K +IGY D
Sbjct: 844 QMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRY 903
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L+ +Q++++ + +HSEKLA+ F L+S IH+ KN+RVC DCHS KF SK+
Sbjct: 904 SLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKIS 963
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD RFHHF G CSC DYW
Sbjct: 964 NRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 194/376 (51%), Gaps = 8/376 (2%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
H ++ A +HA I+ + N ++ YAK G + ARK+FD + KD V+W A
Sbjct: 124 HRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVA 183
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHAFC 120
+ISG+SQN E AI LF +M G+ P + SSVL +G T K G Q+HA
Sbjct: 184 MISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVL----SGCTKIKLFDVGEQLHALV 239
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
KYG YV ++L+ +Y+R A +F+ ++SK+EVS+N+LI+G A++ + AL
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F++M R+ +P + +S+ +A AS G+L +G+ +H++VIK+G V L+D+Y
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLY 359
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
I+ A ++F +VV WN ML + + R F +M G+ PNQ T+
Sbjct: 360 VNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYP 419
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C+ G LD G+ + K G + +D+ + G LD A +R + E
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-E 478
Query: 361 PTAAVWGALLGACRMH 376
W AL+ H
Sbjct: 479 DDVVSWTALISGYAQH 494
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 252/555 (45%), Gaps = 61/555 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E + +H IL F N+ + N +++ Y G LD K+F++MP + + +W
Sbjct: 20 CLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISG+ + + LFS M+ + P + + +SVL+A ++ Q+HA +
Sbjct: 80 DKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARII 139
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+G + + + L+ +YA+ + A +F L +K+ VSW A+I+G ++ E+A+
Sbjct: 140 CHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIH 199
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G PT + +SSV + + G+ +HA V K G L +V N LV +Y+
Sbjct: 200 LFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYS 259
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ + AEKVF+++ +D VS+NS+++G AQ G + F KM R+ + P+ VT
Sbjct: 260 RMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVAS 319
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL--------------------- 340
+L+AC+ G L +G+ + + K G+ + +DL
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379
Query: 341 ----------LGRAGLLDRALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAE 387
G+ L + + R+M I+ P + ++L C ++LG
Sbjct: 380 VVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHT 439
Query: 388 RI----FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
++ F+ + + +L ++YA G+L+ A + + E V SW
Sbjct: 440 QVIKTGFQFNVYVCS---VLIDMYAKHGKLDTAHVILRTLTEDDV-----VSWTA----- 486
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH----- 498
++ H A K ++E+ + Q + SS + + A Q Q+H
Sbjct: 487 --LISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYV 544
Query: 499 ---SEKLALAFALIS 510
SE L++ AL+S
Sbjct: 545 SGYSEDLSIGNALVS 559
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 180/349 (51%), Gaps = 1/349 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +K +HA + + + N ++ Y++ A K+F +M KD V++
Sbjct: 223 CTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSF 282
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LISG +Q + A+ LF++M R LKP+ T++S+L A + K G Q+H++ +
Sbjct: 283 NSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK-GEQLHSYVI 341
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ V +LLD+Y + A +F +++N V WN ++ + ++ R
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M +G P F+Y S+ S G+L+ G+ +H VIK+G Q +V + L+DMYA
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A + L + DVVSW ++++G AQH L ++ F++ML GI + + F
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
++AC+ L++G+ A G + + V L R G + A
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/554 (44%), Positives = 351/554 (63%), Gaps = 5/554 (0%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA + S + + + IL+AY KCG + AR +FD MP K+ V+W A+I GY+QN
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF++M+ G+ ++ + L+A G G D+ G +VH ++ G D NV V +
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE--GMRVHELLVRIGLDSNVSVMN 301
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ MY++ ++D A +F L+ + +VSWNA+I G A+ E A+R F+ M E +P
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F+ SV ALA Q +W+H + I+ +V L+DMYAK G + A +F
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF 421
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N +R V++WN+M+ G HG GKA V FE+M GI PN+ TFL VL+ACSHAGL+D
Sbjct: 422 NSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ YF MK+ +G+EP HY T VDLLGRAG LD A FI++MP++P +V+GA+LGA
Sbjct: 482 EGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGA 541
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++HKNVEL +A++IFEL P + H+LLANIYA+A D AR R M+++G++K P
Sbjct: 542 CKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTP 601
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
S ++ KN +H F + H Q I+ + ++ E+IK +GYVPD+ + D + +
Sbjct: 602 GWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQ 661
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+AF LI T PG+TI IKKN+RVC DCH+A K S V REII+RD RF
Sbjct: 662 L-LNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRF 720
Query: 553 HHFRDGFCSCGDYW 566
HHF+DG CSCGDYW
Sbjct: 721 HHFKDGKCSCGDYW 734
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R VHA + ++ + N YAKC +AR++FD MPV+D V W
Sbjct: 69 CAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAW 128
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
AL++GY++N A+ + +M G +P+ TL SVL A R+ HAF
Sbjct: 129 NALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARA-LAACREAHAFA 187
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G + V V +++LD Y + + A +F + +KN VSWNA+I G+A+ + +AL
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ M+ EG + T S + A G L++G VH +++ G V N L+ MY
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K ++ A VF+ L +R VSWN+M+ GCAQ+G + VR F +M + P+ T +
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 301 CVLTA 305
V+ A
Sbjct: 368 SVIPA 372
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 142/304 (46%), Gaps = 4/304 (1%)
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+D P A+ F M G P T +S+LK A D GR VHA G D
Sbjct: 38 SDLPA-ALAAFVAMSSAGAPPVLRTFTSLLKLCAARG-DLATGRAVHAQLAARGIDSEAL 95
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE- 189
++L +MYA+ + DA +F + ++ V+WNAL+AG+AR A+ M E
Sbjct: 96 AATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEE 155
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G P + SV A A+ +L + HA I+SG + + V ++D Y K G I A
Sbjct: 156 GERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAA 215
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF+ + ++ VSWN+M+ G AQ+G + + F +M+ G+ V+ L L AC
Sbjct: 216 RVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGEL 275
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
G LDEG L+ + G++ + + + + +D A E+ T W A+
Sbjct: 276 GCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRTQVSWNAM 334
Query: 370 LGAC 373
+ C
Sbjct: 335 ILGC 338
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/568 (43%), Positives = 361/568 (63%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVT 60
C L++L +++ L S F D + ++ A +KC +D+A LF M K++V+
Sbjct: 305 CASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVS 364
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISG QN + A+ LFSQM R G+KPN FT S++L F ++HA
Sbjct: 365 WTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYP-----VFVSEMHAEV 419
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ + VG++LLD Y + DA +F +E+K+ ++W+A++AG+A+ E E+A
Sbjct: 420 IKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAA 479
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F ++++EG +P F++SSV A AS T + EQGK HA+ IK V + LV M
Sbjct: 480 KLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTM 539
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G+I+ A +VF R +RD+VSWNSM++G +QHG K + F++M + + + VTF
Sbjct: 540 YAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTF 599
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ V+TAC+HAGL+++GQ YF +++ H + P HY +DL RAG+L++A+ I EMP
Sbjct: 600 IGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
P A VW LLGA R+H+NVELG AAE++ L P DS ++LL+N+YA+AG +
Sbjct: 660 FPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTN 719
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M + VKKEP SW+E KN + F+A D HP I+ K E+S ++K GY PD
Sbjct: 720 VRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPD 779
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ +V + +++E L HSE+LA+AF LI+TPP I I KN+RVCGDCH+ K S
Sbjct: 780 TKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSL 839
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V +R I+VRD+NRFHHF+DG CSCGDYW
Sbjct: 840 VEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 168/299 (56%), Gaps = 4/299 (1%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K R VH + + +++ ++++ Y K +++ R++FDEM +++V+WT+L++GY
Sbjct: 110 KLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGY 169
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDW 127
S N LF QM G+ PN++T+S+V+ A G G QVHA +K+G++
Sbjct: 170 SWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVG--IGLQVHAMVVKHGFEE 227
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+ +Y+R + DA +F +E ++ V+WN++IAG+ R + + F++M
Sbjct: 228 AIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQ 287
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G +PTH +++SV + AS L K + +KSG V L+ +K ++
Sbjct: 288 LAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMD 347
Query: 248 DAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
DA +F+ + + ++VVSW +M++GC Q+G V F +M R G+ PN T+ +LT
Sbjct: 348 DALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTV 406
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 169/334 (50%), Gaps = 11/334 (3%)
Query: 46 ARKLFDEMPVK--DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS 103
A LFD++P + + L+ YS++ Q + A+ LF +L L+P++ TLS V
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 104 GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSW 163
AG+ D K GRQVH C+K+G +V VG+SL+DMY + + ++D +F + +N VSW
Sbjct: 104 -AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+L+AG++ F +M EG P ++ S+V AL + G + G VHA V+K
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G + V N+L+ +Y++ G + DA VF+++ RD V+WNSM+ G ++G
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK----KHGVEPEEAHYVTFVD 339
F KM G+ P +TF V+ +C+ L LM+ K G ++ +
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLREL----ALVKLMQCKALKSGFTTDQIVITALMV 338
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
L + +D AL M W A++ C
Sbjct: 339 ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGC 372
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
N L+ ++R + ++AL F +L +P + S VF A + + G+ VH +K
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G VG +LVDMY K+ ++ D +VF+ + +R+VVSW S+L G + +GL
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F +M G+ PN+ T V+ A + G++ G A++ KHG E + + + L R
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSR 241
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVEL-GAYAAERIFELDPHDSGPHI 401
G+L A +M I W +++ G R +++E+ + ++ + P H+
Sbjct: 242 LGMLRDARDVFDKMEIRDWVT-WNSMIAGYVRNGQDLEVFEIFNKMQLAGVKP----THM 296
Query: 402 LLANIYASAGRLNDAARARKM 422
A++ S L + A + M
Sbjct: 297 TFASVIKSCASLRELALVKLM 317
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/567 (43%), Positives = 363/567 (64%), Gaps = 3/567 (0%)
Query: 2 CTHL-KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C+ L L +R +H H L + D + T+++ Y+K G ++EA LF D+
Sbjct: 1015 CSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLAC 1074
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A++ GY + + A+ LFS + + G K +Q TL++ KA G D+ G+Q+HA
Sbjct: 1075 WNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQ-GKQIHAHA 1133
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+D +++V S +LDMY + M +A +F + + ++V+W ++I+G ++AL
Sbjct: 1134 IKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQAL 1193
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R + M + P ++++++ A + +LEQG+ +HA+VIK FVG +LVDMY
Sbjct: 1194 RIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 1253
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G+IEDA ++F ++ R++ WN+ML G AQHG + V F+ M +GI P++V+F+
Sbjct: 1254 AKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFI 1313
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L+ACSHAGL E Y ++ +G+EPE HY VD LGRAGL+ A K I MP
Sbjct: 1314 GILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPF 1373
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+ +A++ ALLGACR+ +VE G A R+F L+P DS ++LL+NIYA+A R +D A
Sbjct: 1374 KASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDA 1433
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RKMMK VKK+P SW++ KN +H+FV +D +HPQ +I+ K E+ + I++ GYVPD+
Sbjct: 1434 RKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDT 1493
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL + +E+E L HSEKLA+A+ LISTP +TI + KN+RVCGDCH+A K+ SKV
Sbjct: 1494 EFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKV 1553
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
EREI++RD NRFHHFRDG CSCGDYW
Sbjct: 1554 FEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 207/373 (55%), Gaps = 1/373 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + VH + S +D+++ N+++N Y+K GC AR++F++M D+++W ++IS
Sbjct: 920 LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 979
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+Q+ E ++ LF +L GLKP+ FTL+SVL+A + RQ+H LK G
Sbjct: 980 CAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIA 1039
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V ++L+D+Y++ +M++A FLF + + WNA++ G+ ++G+KAL FS +
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIH 1099
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ G + + ++ A L+QGK +HAH IK+G V + ++DMY K G +
Sbjct: 1100 KSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMV 1159
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VFN + D V+W SM++GC +G +R + +M ++ + P++ TF ++ A S
Sbjct: 1160 NAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASS 1219
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
L++G+ A + K + + VD+ + G ++ A + ++M + A+W
Sbjct: 1220 CVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWN 1278
Query: 368 ALLGACRMHKNVE 380
A+L H N E
Sbjct: 1279 AMLVGLAQHGNAE 1291
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 169/373 (45%), Gaps = 34/373 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L A VH + + + D+ + ++N Y+KCG + +AR LFD M +D+V W
Sbjct: 737 CLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLW 796
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAF 119
++ GY Q + A LFS+ R GL+P++F++ +L D+ QV A+
Sbjct: 797 NMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAY 856
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
A+ DD +F WN ++ + A
Sbjct: 857 A-------------------AKLSLSDDNPDVFC---------WNKKLSECLWAGDNWGA 888
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F M + + V A+A T LE GK VH +KSG V N+LV+M
Sbjct: 889 IECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNM 948
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G A +VFN + D++SWNSM++ CAQ L + +V F +L G+ P+ T
Sbjct: 949 YSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTL 1008
Query: 300 LCVLTACSHA--GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
VL ACS GL Q + +K + + T +D+ ++G ++ A +F+ +
Sbjct: 1009 ASVLRACSSLIDGLNISRQIHVHALKTGNI-ADSFVATTLIDVYSKSGKMEEA-EFLFQN 1066
Query: 358 PIEPTAAVWGALL 370
+ A W A++
Sbjct: 1067 KDDLDLACWNAMM 1079
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 167/370 (45%), Gaps = 36/370 (9%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY-- 68
+ HA I+ S D + N +L Y+KCG L AR++FD P +D+VTW A++ Y
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 69 ---SQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKY 123
S + + + LF ++LR L + TL+ VLK +G G VH + +K
Sbjct: 700 SVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG--VHGYAIKI 756
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +W+V+V +L+++Y++ +M DA LF + ++ V WN ++ G+ + ++A + F
Sbjct: 757 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 816
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
SE R G P FS + ++ + ++GKW+ V YA
Sbjct: 817 SEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQ----------------VQAYAAK 859
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
S+ D DV WN L+ C G + F M I + VT L VL
Sbjct: 860 LSLSDDNP--------DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVL 911
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
A + L+ G+ + K G++ + + + V++ + G A + +M
Sbjct: 912 AAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDL 970
Query: 364 AVWGALLGAC 373
W +++ +C
Sbjct: 971 ISWNSMISSC 980
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
ST +L GK HA ++ SG F+ N L+ MY+K GS+ A +VF+ +RD+V+WN+
Sbjct: 633 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNA 692
Query: 267 ML----------TGCAQHGLGKATVRWFEKMLRNGI-APNQVTFLCVLTACSHAGLLDEG 315
+L G AQ GL ++LR + + ++T VL C ++G L
Sbjct: 693 ILGAYAASVDSNDGNAQEGL------HLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+G K G+E + V++ + G + R + + + E +W +L
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRM-RDARLLFDWMRERDVVLWNMML 800
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/566 (44%), Positives = 351/566 (62%), Gaps = 5/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H L E + +HA I F ND + +L+ YAKCG + A +FDEMP +++V+W
Sbjct: 210 CAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSW 269
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G+ +N AI +F ++L LG P+Q ++SSVL A AG + FG+QVH +
Sbjct: 270 NSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSAC-AGLVELDFGKQVHGSIV 326
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G VYV +SL+DMY + +DA LF ++ V+WN +I G R E+A
Sbjct: 327 KRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACT 386
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M+REG EP SYSS+F A AS +L QG +H+HV+K+G + + ++LV MY
Sbjct: 387 YFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYG 446
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ DA +VF + +VV W +M+T QHG ++ FE+ML G+ P +TF+
Sbjct: 447 KCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVS 506
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH G +D+G YF M H ++P HY VDLLGR G L+ A +FI MP E
Sbjct: 507 VLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFE 566
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + VWGALLGAC H NVE+G AER+F+L+P + G ++LL+NIY G L +A R
Sbjct: 567 PDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVR 626
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M +GV+KE CSW++ KN +F AND +H + I+ +++ E IK+ GYV ++
Sbjct: 627 RLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQ 686
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ + E E L HSEKLALAF L+ PPGS + IKKN+R CGDCH+ KFAS++
Sbjct: 687 FATNSVEGSE-EQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIF 745
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REIIVRD NRFH F +G CSC DYW
Sbjct: 746 QREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 195/374 (52%), Gaps = 6/374 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMVTWT 62
LK LK A +H+ ++ + +A NT+L YAKCG + LF+ P ++VTWT
Sbjct: 110 LKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
LI+ S++++P A+ F++M G+ PN FT S++L A A + G+Q+HA K
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSE-GQQIHALIHK 228
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ + + +V ++LLDMYA+ M A +F + +N VSWN++I G + +A+
Sbjct: 229 HCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGV 288
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F E+L G P S SSV +A A L+ GK VH ++K G + +V N+LVDMY K
Sbjct: 289 FREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCK 346
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G EDA K+F RDVV+WN M+ GC + + +F+ M+R G+ P++ ++ +
Sbjct: 347 CGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSL 406
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
A + L +G + + K G + V + G+ G + A + RE E
Sbjct: 407 FHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK-EHN 465
Query: 363 AAVWGALLGACRMH 376
W A++ H
Sbjct: 466 VVCWTAMITVFHQH 479
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL--KRDVVS 263
A SL+ +H+ ++ + NTL+ +YAK GSI +FN +VV+
Sbjct: 108 AKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVT 167
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +++ ++ + +F +M GI PN TF +L AC+HA LL EGQ AL+
Sbjct: 168 WTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIH 227
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
KH + +D+ + G + A EMP
Sbjct: 228 KHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMP 262
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/577 (42%), Positives = 365/577 (63%), Gaps = 15/577 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L R H L F+ D+ + + +++ Y+KCG L +AR LFDE+ +++V+W
Sbjct: 162 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 221
Query: 62 TALISGYSQNDQPENAIILFSQML----------RLGLKPNQFTLSSVLKASGAGATDDK 111
T++I+GY QND A++LF + L + + P + SVL A + ++
Sbjct: 222 TSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSAC-SRVSEKS 278
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
VH F +K G++ ++ V ++L+D YA+ ++ + +F + ++ +SWN++IA +A
Sbjct: 279 ITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338
Query: 172 RKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ +++ F M+++G + S+V A A +GS GK +H VIK G +
Sbjct: 339 QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
FVG +++DMY K G +E A K F+R+ +++V SW++M+ G HG K + F +M
Sbjct: 399 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ PN +TF+ VL ACSHAGLL+EG +F A+ + VEP HY VDLLGRAG L
Sbjct: 459 GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 518
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A I+ M + P VWGALLGACRMHKNV+LG +A ++FELDP + G ++LL+NIYA
Sbjct: 519 AFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYAD 578
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
AGR D R R +MK SG+ K P S V+ K VH+F+ D HPQ I++ ++S K
Sbjct: 579 AGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMK 638
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
++++GYVPD + VL +E+E L+VHSEKLA+AF +++T PG+TIHI KN+RVCGDC
Sbjct: 639 LQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDC 698
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+A KF SK+V+REI+VRD+ RFHHFRDG CSCGDYW
Sbjct: 699 HTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 183/355 (51%), Gaps = 14/355 (3%)
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
++ +W ++I+ +++ A+ FS M +L LKPN+ T +K+ A D GRQ
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSA-LLDLHSGRQA 174
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H L +G++ +++V S+L+DMY++ ++ DA LF + +N VSW ++I G+ + +
Sbjct: 175 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 234
Query: 177 EKALRTFSEMLRE--GFE------PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+AL F E L E G E + SV +A + + VH +IK G +
Sbjct: 235 HRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEG 294
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
V NTL+D YAK G + + +VF+ + +RDV+SWNS++ AQ+G+ ++ F +M+
Sbjct: 295 DLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMV 354
Query: 289 RNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
++G I N VT VL AC+H+G G+ + K G+E + +D+ + G +
Sbjct: 355 KDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKV 414
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
+ A K M E W A++ MH + + A E +E++ P+ +
Sbjct: 415 EMARKAFDRMR-EKNVKSWSAMVAGYGMHGHAK---EALEVFYEMNMAGVKPNYI 465
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 9/226 (3%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
++ N SWN++IA AR + +ALR FS M + +P ++ + ++ L G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ H + G + FV + LVDMY+K G + DA +F+ + R++VSW SM+TG Q+
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 275 GLGKATVRWFEKML--------RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
+ F++ L + + + + VL+ACS +G + K G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + T +D + G L + + M E W +++
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMA-ERDVISWNSIIAV 336
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/515 (46%), Positives = 344/515 (66%), Gaps = 33/515 (6%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-- 141
M+ G+KPNQFTLS+V+KA + A+ ++ G+Q H + +K G++ +V V ++L+ MYAR
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQ-GKQAHNYIIKMGFESDVVVQTALVHMYARCG 59
Query: 142 --------FDQMDD---------------------AWFLFTALESKNEVSWNALIAGHAR 172
FD+M + A LF + ++ VSW A+IAG+A+
Sbjct: 60 SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
G+++L F++M + G + F SV +A A +LE G+ HA+V++SG L V
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G+ LVDMYAKSGS+EDA +VF+++ +R+ VSWNS++TGCAQHG G V FE+ML+ GI
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
PN+++F+ VL+ACSH GL++EG+GYF LM + +G+ P+ +HY +DLLGRAG LD A
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
FI MP+EP +VWGALLGACR+H N EL AE + ++ +G ++LL+NIYA+AG
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
+ +DAA+ RK+MK+ GV K+P SW+E K +H FVA + +HPQ IH+ +S K+K
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMK 419
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
GYVP+ + VL + E+E L HSEKLA+AF +I+T PG+TI + KN+RVCGDCH+
Sbjct: 420 AAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHT 479
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KF S R+I+VRD NRFHHF+DG CSCGDYW
Sbjct: 480 VIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 191/368 (51%), Gaps = 41/368 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L++ + H +I+ F++D+ +Q +++ YA+CG L++A +FD+M + TW
Sbjct: 20 CASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTW 79
Query: 62 TALIS-------------------------------GYSQNDQPENAIILFSQMLRLGLK 90
A+I+ GY+QN + ++ +F+QM + G+K
Sbjct: 80 NAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMK 139
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
++F + SVL A A + GRQ HA+ ++ G+ ++ VGS+L+DMYA+ M+DA
Sbjct: 140 SDRFIMGSVLSAC-ADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQ 198
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + +NEVSWN++I G A+ G A+ F +ML+ G +P S+ V +A + TG
Sbjct: 199 VFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGL 258
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+ +G+ + ++ G +V V + ++D+ ++G +++AE N + ++ DV W ++
Sbjct: 259 VNEGRGYFNLMTQNYG-IVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGAL 317
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH--AGLLDEGQGYFALMKKH 325
L C HG + R E +L + Q+ + VL + + AG D+ LMK
Sbjct: 318 LGACRIHGNTELAKRIAEHLLGMEV---QIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDR 374
Query: 326 GVEPEEAH 333
GV + +
Sbjct: 375 GVMKQPGY 382
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/595 (40%), Positives = 369/595 (62%), Gaps = 31/595 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA--------------- 46
CT +K L+ VH I+ D+ N ++N Y+K L+E
Sbjct: 116 CTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDV 175
Query: 47 --------------RKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
RK+F+ MP +D+V+W +ISG +QN E+A+++ +M L+P+
Sbjct: 176 YSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPD 235
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
FTLSSVL K G+++H + ++ GYD +V++GSSL+DMYA+ ++DD+ +F
Sbjct: 236 SFTLSSVLPIFAEYVNLLK-GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVF 294
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
L + +SWN++IAG + ++ L+ F +ML +P H S+SS+ A A +L
Sbjct: 295 YMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLH 354
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
GK +H ++I+S F+ + LVDMYAK G+I A +F+++ D+VSW +M+ G A
Sbjct: 355 LGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYA 414
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEE 331
HG + F++M G+ PN V F+ VLTACSHAGL+DE YF ++ + + + P
Sbjct: 415 LHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGL 474
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY DLLGR G L+ A +FI +M IEPT +VW LL ACR+HKN+EL ++++F
Sbjct: 475 EHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT 534
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
+DP + G ++LL+NIY++AGR DA + R M++ G+KK+PACSW+E KN VH FVA D
Sbjct: 535 VDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDK 594
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
+HP I++ + + E++++ GYV D++ VL +++++ L HSE+LA+ F +IST
Sbjct: 595 SHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIIST 654
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
P G+TI + KN+RVC DCH+A KF SK+V REI+VRD +RFHHF+DG CSCGD+W
Sbjct: 655 PAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 208/419 (49%), Gaps = 37/419 (8%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVTW 61
+ +K +A+ +HA IL ++ + ++ +TIL+ Y+ L ++ +F+ +P + W
Sbjct: 16 SSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAW 74
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y+ + +++ F QML G P+ SVLK S D +FG VH +
Sbjct: 75 KSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLK-SCTLMKDLRFGESVHGCII 133
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMD-----------------------DAWFL------F 152
+ G +++Y ++L++MY++F ++ ++++L F
Sbjct: 134 RLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVF 193
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ ++ VSWN +I+G+A+ E AL EM P F+ SSV A +L
Sbjct: 194 EMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLL 253
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+GK +H + I++G F+G++L+DMYAK ++D+ +VF L + D +SWNS++ GC
Sbjct: 254 KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 313
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
Q+G+ +++F++ML I PN V+F ++ AC+H L G+ + + +
Sbjct: 314 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 373
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
VD+ + G + A +M + + W A++ +H + AY A +F+
Sbjct: 374 IASALVDMYAKCGNIRTARWIFDKMELYDMVS-WTAMIMGYALHGH----AYDAISLFK 427
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 369/568 (64%), Gaps = 5/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A ++H +++ + D+ + N ++N YAK G L++ARK F +M + D+V+W
Sbjct: 326 CPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSW 385
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QND P A F +M G +P+ TL S L + A + D K R VH F +
Sbjct: 386 NSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVS-LASIVAQSRDCKNSRSVHGFIM 444
Query: 122 KYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+ +V +G++++DMYA+ +D A +F + K+ +SWN LI G+A+ +A+
Sbjct: 445 RRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAI 504
Query: 181 RTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ +M+ E E P ++ S+ A A G+L+QG +H VIK+ L FV L+D
Sbjct: 505 EVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 563
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G + DA +F ++ + V+WN++++ HG + T++ F +ML G+ P+ VT
Sbjct: 564 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 623
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F+ +L+ACSH+G ++EG+ F LM+++G++P HY VDLLGRAG L+ A FI++MP
Sbjct: 624 FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 683
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P A++WGALLGACR+H N+ELG +A++R+FE+D + G ++LL+NIYA+ G+ +
Sbjct: 684 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDK 743
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R + +E G+KK P S +E V +F + +HP+ I+++ R ++ K+K +GY+PD
Sbjct: 744 VRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPD 803
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
S VL ++ E+E L HSE+LA+AF +ISTPP S I I KN+RVCGDCH+A KF S+
Sbjct: 804 YSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISR 863
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REI+VRD+NRFHHF+DG CSCGDYW
Sbjct: 864 ITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 226/435 (51%), Gaps = 25/435 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + R +H F+ ++ + ++++ Y++ G AR LFD+MP +DM +W A+ISG
Sbjct: 231 LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
QN A+ + +M G+K N T+ S+L D +H + +K+G ++
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVC-PQLGDISTAMLIHLYVIKHGLEF 349
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++V ++L++MYA+F ++DA F + + VSWN++IA + + + A F +M
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGSI 246
GF+P + S+ + +A + + + VH +++ G + +GN +VDMYAK G +
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTA 305
+ A KVF + +DV+SWN+++TG AQ+GL + ++ M I PNQ T++ +L A
Sbjct: 470 DSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529
Query: 306 CSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFV-----DLLGRAGLLDRALKFIREMPI 359
+H G L +G MK HG V H FV D+ G+ G L A+ ++P
Sbjct: 530 YAHVGALQQG------MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIF--ELDPHDSGPHILLANIYAS---AGRLN 414
E ++ W A++ +H + E ++F LD H+ ++ ++ +G +
Sbjct: 584 E-SSVTWNAIISCHGIHGHAE----KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638
Query: 415 DAARARKMMKESGVK 429
+ ++M+E G+K
Sbjct: 639 EGKWCFRLMQEYGIK 653
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 182/366 (49%), Gaps = 7/366 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K A+ +HA ++ + I + ++N YA G + +R FD++P KD+ W ++IS
Sbjct: 131 KTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMIS 190
Query: 67 GYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
Y N AI F Q+L + ++P+ +T VLKA G GR++H + K G+
Sbjct: 191 AYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD----GRKIHCWAFKLGF 246
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
WNV+V +SL+ MY+RF A LF + ++ SWNA+I+G + +AL E
Sbjct: 247 QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDE 306
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M EG + + S+ G + +H +VIK G + FV N L++MYAK G+
Sbjct: 307 MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN 366
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+EDA K F ++ DVVSWNS++ Q+ +F KM NG P+ +T + + +
Sbjct: 367 LEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASI 426
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAA 364
+ + + + + G E+ VD+ + GLLD A K +P++ +
Sbjct: 427 VAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVIS 486
Query: 365 VWGALL 370
W L+
Sbjct: 487 -WNTLI 491
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
+T F + +HA + G ++++ + L+++YA + + F + K+ +WN++
Sbjct: 129 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 188
Query: 167 IAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
I+ + +A+ F ++L P +++ V L + G+L G+ +H K G
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV---LKACGTLVDGRKIHCWAFKLG 245
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
Q FV +L+ MY++ G A +F+ + RD+ SWN+M++G Q+G + +
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 305
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M GI N VT + +L C G + + KHG+E + +++ + G
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGA 372
L+ A K ++M I + W +++ A
Sbjct: 366 NLEDARKAFQQMFITDVVS-WNSIIAA 391
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 369/568 (64%), Gaps = 5/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A ++H +++ + D+ + N ++N YAK G L++ARK F +M + D+V+W
Sbjct: 326 CPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSW 385
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QND P A F +M G +P+ TL S L + A + D K R VH F +
Sbjct: 386 NSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVS-LASIVAQSRDCKNSRSVHGFIM 444
Query: 122 KYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+ +V +G++++DMYA+ +D A +F + K+ +SWN LI G+A+ +A+
Sbjct: 445 RRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAI 504
Query: 181 RTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ +M+ E E P ++ S+ A A G+L+QG +H VIK+ L FV L+D
Sbjct: 505 EVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLID 563
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G + DA +F ++ + V+WN++++ HG + T++ F +ML G+ P+ VT
Sbjct: 564 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 623
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F+ +L+ACSH+G ++EG+ F LM+++G++P HY VDLLGRAG L+ A FI++MP
Sbjct: 624 FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP 683
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P A++WGALLGACR+H N+ELG +A++R+FE+D + G ++LL+NIYA+ G+ +
Sbjct: 684 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDK 743
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R + +E G+KK P S +E V +F + +HP+ I+++ R ++ K+K +GY+PD
Sbjct: 744 VRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPD 803
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
S VL ++ E+E L HSE+LA+AF +ISTPP S I I KN+RVCGDCH+A KF S+
Sbjct: 804 YSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISR 863
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REI+VRD+NRFHHF+DG CSCGDYW
Sbjct: 864 ITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 224/429 (52%), Gaps = 13/429 (3%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + R +H F+ ++ + ++++ Y++ G AR LFD+MP +DM +W A+ISG
Sbjct: 231 LVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
QN A+ + +M G+K N T+ S+L D +H + +K+G ++
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVC-PQLGDISTAMLIHLYVIKHGLEF 349
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++V ++L++MYA+F ++DA F + + VSWN++IA + + + A F +M
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGSI 246
GF+P + S+ + +A + + + VH +++ G + +GN +VDMYAK G +
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTA 305
+ A KVF +L +DV+SWN+++TG AQ+GL + ++ M I PNQ T++ +L A
Sbjct: 470 DSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+H G L +G + K + + +D+ G+ G L A+ ++P E ++
Sbjct: 530 YAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVT 588
Query: 366 WGALLGACRMHKNVELGAYAAERIF--ELDPHDSGPHILLANIYAS---AGRLNDAARAR 420
W A++ +H + E ++F LD H+ ++ ++ +G + +
Sbjct: 589 WNAIISCHGIHGHAE----KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 644
Query: 421 KMMKESGVK 429
++M+E G+K
Sbjct: 645 RLMQEYGIK 653
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 182/366 (49%), Gaps = 7/366 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K A+ +HA ++ + I + ++N YA G + +R FD++P KD+ TW ++IS
Sbjct: 131 KTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMIS 190
Query: 67 GYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
Y N AI F Q+L + ++P+ +T VLKA G GR++H + K G+
Sbjct: 191 AYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD----GRRIHCWAFKLGF 246
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
WNV+V +SL+ MY+RF A LF + ++ SWNA+I+G + +AL E
Sbjct: 247 QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDE 306
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M EG + + S+ G + +H +VIK G + FV N L++MYAK G+
Sbjct: 307 MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN 366
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+EDA K F ++ DVVSWNS++ Q+ +F KM NG P+ +T + + +
Sbjct: 367 LEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASI 426
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAA 364
+ + + + + G E+ VD+ + GLLD A K + E+ +
Sbjct: 427 VAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHK-VFEIILVKDVI 485
Query: 365 VWGALL 370
W L+
Sbjct: 486 SWNTLI 491
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 5/267 (1%)
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
+T F + +HA + G ++++ + L+++YA + + F + K+ +WN++
Sbjct: 129 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSM 188
Query: 167 IAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
I+ + +A+ F ++L P +++ V L + G+L G+ +H K G
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV---LKACGTLVDGRRIHCWAFKLG 245
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
Q FV +L+ MY++ G A +F+ + RD+ SWN+M++G Q+G + +
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 305
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M GI N VT + +L C G + + KHG+E + +++ + G
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGA 372
L+ A K ++M I + W +++ A
Sbjct: 366 NLEDARKAFQQMFITDVVS-WNSIIAA 391
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/560 (43%), Positives = 355/560 (63%), Gaps = 3/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ VH ++L + F++ + + +++ Y+KCG + AR +FD M + +V+W ++I G
Sbjct: 147 LRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDG 206
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y Q+ E A+++F +ML G++P T+ L A A D + G+ VH + D
Sbjct: 207 YVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC-ADLGDLERGKFVHKLVDQLKLDS 265
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V V +SL+ MY++ ++D A +F L +K VSWNA+I G+A+ +AL F EM
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ 325
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+P F+ SV ALA Q KW+H VI+ FV LVDMYAK G+I
Sbjct: 326 SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIH 385
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A K+F+ + R V++WN+M+ G HGLGK +V F++M + I PN +TFLC L+ACS
Sbjct: 386 TARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACS 445
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL++EG +F MKK +G+EP HY VDLLGRAG L++A FI++MPI+P V+
Sbjct: 446 HSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVY 505
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GA+LGAC++HKNV+LG AA IF+L+P D G H+LLANIYA+A A+ R +M++S
Sbjct: 506 GAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKS 565
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G++K P CS VE N VH F + +HPQ I+ + ++I+ GYVPD++ +
Sbjct: 566 GLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSIHDVE 625
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D + + L HSEKLA+AF L++T G+ IHI+KN+RVCGDCH+A K+ S V REIIV
Sbjct: 626 DDVKVQL-LNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIV 684
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD +RFH F+DG CSCGDYW
Sbjct: 685 RDMHRFHLFKDGVCSCGDYW 704
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 197/399 (49%), Gaps = 5/399 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK + +H ++ S F ++ ++N YAKC +++A +FD MP +D+V W
Sbjct: 40 CGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCW 99
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY+QN + A++L +M G +P+ T+ S+L A A + G VH + L
Sbjct: 100 NTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAV-ADTRLLRIGMAVHGYVL 158
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ V V ++L+DMY++ + A +F ++ + VSWN++I G+ + + E A+
Sbjct: 159 RAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAML 218
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML EG +PT+ + A A G LE+GK+VH V + V N+L+ MY+
Sbjct: 219 IFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYS 278
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K ++ A +F L + +VSWN+M+ G AQ+G + F +M I P+ T +
Sbjct: 279 KCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVS 338
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
V+ A + + + + L+ + ++ VD+ + G + A K M
Sbjct: 339 VIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARH 398
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
W A++ H LG + E E+ P+
Sbjct: 399 VIT-WNAMIDGYGTHG---LGKTSVELFKEMKKGTIKPN 433
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 165/307 (53%), Gaps = 2/307 (0%)
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
++ GY+++ ++A+ FS+M ++P + + +LK G +D K G+++H +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDN-SDLKRGKEIHGSVITS 59
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ WN++ + +++MYA+ Q++DA+ +F + ++ V WN +I+G+A+ + AL
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
M EG P + S+ A+A T L G VH +V+++G + + V LVDMY+K
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GS+ A +F+ + R VVSWNSM+ G Q G + + F+KML G+ P VT + L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC+ G L+ G+ L+ + ++ + + + + + + +D A + + T
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTL 298
Query: 364 AVWGALL 370
W A++
Sbjct: 299 VSWNAMI 305
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/569 (42%), Positives = 367/569 (64%), Gaps = 9/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C +LK+L+ +H ++ F D ++ ++ AY+KC + +A +LF E+ V ++V+
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISG+ QND E A+ LFS+M R G++PN+FT S +L A + +VHA
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS-----EVHAQV 419
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ + VG++LLD Y + ++++A +F+ ++ K+ V+W+A++AG+A+ E E A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAST-GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F E+ + G +P F++SS+ A+T S+ QGK H IKS V + L+ M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G+IE AE+VF R ++D+VSWNSM++G AQHG + F++M + + + VTF
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ V AC+HAGL++EG+ YF +M + + P + H VDL RAG L++A+K I MP
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ +W +L ACR+HK ELG AAE+I + P DS ++LL+N+YA +G + A+
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M E VKKEP SW+E KN + F+A D +HP + I+ K ++S ++K +GY PD
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 779
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S+VL D + +EA L HSE+LA+AF LI+TP GS + I KN+RVCGDCH K +K
Sbjct: 780 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAK 839
Query: 539 VVEREIIVRDTNRFHHF-RDGFCSCGDYW 566
+ EREI+VRD+NRFHHF DG CSCGD+W
Sbjct: 840 IEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 174/328 (53%), Gaps = 1/328 (0%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A LFD+ P +D ++ +L+ G+S++ + + A LF + RLG++ + SSVLK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
S A D+ FGRQ+H C+K+G+ +V VG+SL+D Y + D +F ++ +N V+
Sbjct: 103 S-ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
W LI+G+AR S ++ L F M EG +P F++++ LA G +G VH V+
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K+G V N+L+++Y K G++ A +F++ + VV+WNSM++G A +GL +
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
F M N + ++ +F V+ C++ L + + K+G ++ +
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + AL+ +E+ W A++
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMI 369
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 157/299 (52%), Gaps = 8/299 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H + F +D+++ ++++ Y K + RK+FDEM +++VTWT LISGY++
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSS---VLKASGAGATDDKFGRQVHAFCLKYGYDW 127
N + + LF +M G +PN FT ++ VL G G G QVH +K G D
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR----GLQVHTVVVKNGLDK 227
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+++Y + + A LF E K+ V+WN++I+G+A +AL F M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ S++SV A+ L + +H V+K G + L+ Y+K ++
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
DA ++F + +VVSW +M++G Q+ + V F +M R G+ PN+ T+ +LTA
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/566 (42%), Positives = 361/566 (63%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E R VHA ++ + ++ + + ++ Y +CG LD+AR + D MP + +V+W
Sbjct: 20 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +ISGYSQ ++ A+ LF +MLR G PN++TL++VL S +G G+QVH+ +
Sbjct: 80 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL-TSCSGPQSIYQGKQVHSLLV 138
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ +++VGSSLLDMYA+ + + +A +F L ++ VS A+I+G+A+K E+AL
Sbjct: 139 KTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALD 198
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ EG + H +++++ TAL+ SL+ GK VHA +++ + N+L+DMY+
Sbjct: 199 LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYS 258
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + + +VF+ +L+R VVSWN+ML G +HGLG + F K L + P+ VT L
Sbjct: 259 KCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLA 317
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ CSH GL+DEG F ++K+ HY +DLLGR+G L++AL I MP E
Sbjct: 318 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 377
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
T ++WG+LLGACR+H NV +G A+++ E++P ++G +++L+NIYA+AG D + R
Sbjct: 378 STPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVR 437
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M E V KEP SW+ +H F +++ HP + I+ K +EI IK G+VPD S
Sbjct: 438 KLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLS 497
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D +++E L HSEKLA+ F L++TPPG TI + KN+R+C DCH+ KF SKV
Sbjct: 498 CVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVY 557
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREI +RD NRFH G C+CGDYW
Sbjct: 558 EREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + TA +L +G+ VHA +I + + F+G LV MY + G+++DA V +R+
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R VVSW +M++G +Q + F KMLR G PN+ T VLT+CS + +G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+L+ K E + +D+ ++ + A + +P
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/568 (41%), Positives = 367/568 (64%), Gaps = 5/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A ++H +++ + ++ + N ++N YAK G L +A+K+F +M ++D+V+W
Sbjct: 283 CAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSW 342
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QND P A F +M GL+P+ TL S L + A + D K R VH F +
Sbjct: 343 NSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVS-LASIAAQSRDYKNSRSVHGFIM 401
Query: 122 KYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+ V +G++++DMYA+ +D A +F + K+ VSWN LI+G+ + +A+
Sbjct: 402 RRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAI 461
Query: 181 RTFSEM--LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ M RE + ++ S+ A A G+L+QG +H H+IK+ L FVG L+D
Sbjct: 462 EVYRMMEECRE-IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLID 520
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G + DA +F ++ + V WN++++ HG G+ ++ F +M G+ P+ VT
Sbjct: 521 LYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVT 580
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F+ +L+ACSH+GL+DEG+ +F LM+++G++P HY VDLLGRAG L+ A FI++MP
Sbjct: 581 FISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMP 640
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ P A++WGALLGACR+H N+ELG +A++R+FE+D + G ++LL+NIYA+ G+ +
Sbjct: 641 LHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDK 700
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R + +E G+KK P S +E V +F + +HP+ I+ + R ++ K+K +GY+PD
Sbjct: 701 VRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPD 760
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
S VL ++ E+E L HSE+LA+AF +ISTPP S I I KN+RVCGDCH+A KF S+
Sbjct: 761 YSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISR 820
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ EREI+VRD+ RFHHF++G CSCGDYW
Sbjct: 821 ITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 223/430 (51%), Gaps = 11/430 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + R +H + F+ D+ + ++++ Y++ G + AR LFD+MP +DM +W A+I
Sbjct: 186 QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMI 245
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
SG QN A+ + +M G+ + T++S+L A D +H + +K+G
Sbjct: 246 SGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVC-AQLGDISTATLIHLYVIKHGL 304
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++ ++V ++L++MYA+F + DA +F + ++ VSWN++IA + + + A F +
Sbjct: 305 EFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFK 364
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV-GNTLVDMYAKSG 244
M G EP + S+ + A + + + VH +++ G + A V GN ++DMYAK G
Sbjct: 365 MQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLG 424
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVL 303
I+ A KVFN + +DVVSWN++++G Q+GL + + M I NQ T++ +L
Sbjct: 425 VIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSIL 484
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
A +H G L +G + K + + +DL G+ G L A+ ++P E +
Sbjct: 485 AAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSV 544
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDAARA 419
W A++ +H + G A + E+ P H+ ++ ++ +G +++
Sbjct: 545 P-WNAIISCHGIHGH---GEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF 600
Query: 420 RKMMKESGVK 429
+M+E G+K
Sbjct: 601 FHLMQEYGIK 610
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 182/362 (50%), Gaps = 7/362 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A+ +HA ++ S + ++N YA G + +R FD++ KD+ TW ++IS Y +
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 71 NDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
N AI F Q+L + + + +T VLKA GR++H + K G+ W+V
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD----GRKIHCWVFKLGFQWDV 207
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+V +SL+ MY+RF + A LF + ++ SWNA+I+G + +AL EM E
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G + +S+ A G + +H +VIK G + FV N L++MYAK G++ DA
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+KVF ++ RDVVSWNS++ Q+ +F KM NG+ P+ +T + + + + +
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFV-DLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
+ + + G E V D+ + G++D A K +P++ + W
Sbjct: 388 RDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVS-WNT 446
Query: 369 LL 370
L+
Sbjct: 447 LI 448
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 128/266 (48%), Gaps = 5/266 (1%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
T +++HA + G + ++ L+++YA + + F ++ K+ +WN++I
Sbjct: 87 TKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMI 146
Query: 168 AGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
+ + R +A+ F ++L F+ +++ V L + +L G+ +H V K G
Sbjct: 147 SAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPV---LKACQTLVDGRKIHCWVFKLGF 203
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
Q FV +L+ MY++ G + A +F+ + RD+ SWN+M++G Q+G + ++
Sbjct: 204 QWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDE 263
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
M GI + VT +L C+ G + + KHG+E E +++ + G
Sbjct: 264 MRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGN 323
Query: 347 LDRALKFIREMPIEPTAAVWGALLGA 372
L A K ++M + + W +++ A
Sbjct: 324 LGDAQKVFQQMFLRDVVS-WNSIIAA 348
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/566 (42%), Positives = 361/566 (63%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E R VHA ++ + ++ + + ++ Y +CG LD+AR + D MP + +V+W
Sbjct: 52 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 111
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +ISGYSQ ++ A+ LF +MLR G PN++TL++VL S +G G+QVH+ +
Sbjct: 112 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL-TSCSGPQSIYQGKQVHSLLV 170
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ +++VGSSLLDMYA+ + + +A +F L ++ VS A+I+G+A+K E+AL
Sbjct: 171 KTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALD 230
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ EG + H +++++ TAL+ SL+ GK VHA +++ + N+L+DMY+
Sbjct: 231 LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYS 290
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + + +VF+ +L+R VVSWN+ML G +HGLG + F K L + P+ VT L
Sbjct: 291 KCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLA 349
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ CSH GL+DEG F ++K+ HY +DLLGR+G L++AL I MP E
Sbjct: 350 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 409
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
T ++WG+LLGACR+H NV +G A+++ E++P ++G +++L+NIYA+AG D + R
Sbjct: 410 STPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVR 469
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M E V KEP SW+ +H F +++ HP + I+ K +EI IK G+VPD S
Sbjct: 470 KLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLS 529
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D +++E L HSEKLA+ F L++TPPG TI + KN+R+C DCH+ KF SKV
Sbjct: 530 CVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVY 589
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREI +RD NRFH G C+CGDYW
Sbjct: 590 EREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR S M G Y + TA +L +G+ VHA +I + + F+G LV M
Sbjct: 27 LRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTM 86
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y + G+++DA V +R+ +R VVSW +M++G +Q + F KMLR G PN+ T
Sbjct: 87 YVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTL 146
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VLT+CS + +G+ +L+ K E + +D+ ++ + A + +P
Sbjct: 147 ATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/602 (41%), Positives = 366/602 (60%), Gaps = 38/602 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC--------------------- 40
CT + L+ VH I+ D+ N ++N YAK
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTS 174
Query: 41 ----------GCL-----DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
C+ D R++F+ MP KD+V++ +I+GY+Q+ E+A+ + +M
Sbjct: 175 NSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
LKP+ FTLSSVL + D G+++H + ++ G D +VY+GSSL+DMYA+ ++
Sbjct: 235 TTDLKPDSFTLSSVLPIF-SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI 293
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+D+ +F+ L ++ +SWN+L+AG+ + +ALR F +M+ +P ++SSV A
Sbjct: 294 EDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A +L GK +H +V++ G F+ + LVDMY+K G+I+ A K+F+R+ D VSW
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 413
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
+++ G A HG G V FE+M R G+ PNQV F+ VLTACSH GL+DE GYF M K
Sbjct: 414 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+G+ E HY DLLGRAG L+ A FI +M +EPT +VW LL +C +HKN+EL
Sbjct: 474 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AE+IF +D + G ++L+ N+YAS GR + A+ R M++ G++K+PACSW+E KN H
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTH 593
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
FV+ D +HP I++ + + E++++ GYV D+S VL D++ + L HSE+LA+
Sbjct: 594 GFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAV 653
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF +I+T PG+TI + KNIR+C DCH A KF SK+ EREIIVRD +RFHHF G CSCGD
Sbjct: 654 AFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGD 713
Query: 565 YW 566
YW
Sbjct: 714 YW 715
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 191/410 (46%), Gaps = 39/410 (9%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T +K +A+ +HA + + + + + +++ Y L EA LF + ++ W
Sbjct: 16 TRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++I ++ A+ F +M G P+ SVLK S D +FG VH F ++
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLK-SCTMMMDLRFGESVHGFIVR 133
Query: 123 YGYDWNVYVGSSLLDMYAR-------------FDQM-----------------------D 146
G D ++Y G++L++MYA+ FD+M D
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+F + K+ VS+N +IAG+A+ E ALR EM +P F+ SSV +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ +GK +H +VI+ G ++G++LVDMYAKS IED+E+VF+RL RD +SWNS
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++ G Q+G +R F +M+ + P V F V+ AC+H L G+ + + G
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
VD+ + G + A K M + + W A++ +H
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALH 422
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/569 (42%), Positives = 367/569 (64%), Gaps = 9/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C +LK+L+ +H ++ F D ++ ++ AY+KC + +A +LF E + ++V+
Sbjct: 309 CANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVS 368
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISG+ QND E A+ LFS+M R G++PN+FT S +L A + +VHA
Sbjct: 369 WTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPS-----EVHAQV 423
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ + VG++LLD Y + ++D+A +F+ +++K+ V+W+A++AG+A+ E E A+
Sbjct: 424 VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAI 483
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALA-STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ FSE+ + G +P F++SS+ A +T S+ QGK H IKS V + L+ M
Sbjct: 484 KIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 543
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G IE AE+VF R ++D+VSWNSM++G AQHG + F++M + + + VTF
Sbjct: 544 YAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTF 603
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ V AC+HAGL++EG+ YF +M + + P + H VDL RAG L++A+K I MP
Sbjct: 604 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMP 663
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ +W +L ACR+HK ELG AAE+I + P DS ++LL+N+YA +G + A+
Sbjct: 664 NLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAK 723
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M E VKKEP SW+E KN + F+A D +HP + I+ K ++S ++K +GY PD
Sbjct: 724 VRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 783
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S+VL D + +EA L HSE+LA+AF LI+TP GS + I KN+RVCGDCH K +K
Sbjct: 784 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAK 843
Query: 539 VVEREIIVRDTNRFHHF-RDGFCSCGDYW 566
+ EREI+VRD+NRFHHF DG CSCGD+W
Sbjct: 844 IEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 172/325 (52%), Gaps = 1/325 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A LFD+ P +D ++T+L+ G+S++ + + A LF + LG++ + SSVLK S A
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVS-A 108
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
D+ FGRQ+H C+K+G+ +V VG+SL+D Y + D +F ++ +N V+W
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
LI+G+AR S E+ L F M EG +P F++++ LA G +G VH V+K+G
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
V N+L+++Y K G++ A +F++ + VV+WNSM++G A +GL + F
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
M N + ++ +F ++ C++ L + + K+G ++ + +
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348
Query: 346 LLDRALKFIREMPIEPTAAVWGALL 370
+ AL+ +E W A++
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMI 373
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 8/299 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H + F +D+++ ++++ Y K + R +FDEM +++VTWT LISGY++
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYAR 175
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSS---VLKASGAGATDDKFGRQVHAFCLKYGYDW 127
N E + LF +M G +PN FT ++ VL G G G QVH +K G D
Sbjct: 176 NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGR----GLQVHTVVVKNGLDK 231
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+++Y + + A LF E K+ V+WN++I+G+A +AL F M
Sbjct: 232 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 291
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ S++S+ A+ L + +H V+K G + L+ Y+K ++
Sbjct: 292 LNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAML 351
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
DA ++F +VVSW +M++G Q+ + V F +M R G+ PN+ T+ +LTA
Sbjct: 352 DALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/567 (43%), Positives = 354/567 (62%), Gaps = 4/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH +L + ++ D+ + +L Y +CG D+A + F +MP D++ W
Sbjct: 157 CLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPW 216
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +IS ++Q+ Q E A+ +F QM R + PNQFT SSVL+AS + D + +H L
Sbjct: 217 SFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLD-LSKTIHGHAL 275
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V+V ++L+ YA+ ++ + LF AL +N+VSWN +I + + +GE+AL
Sbjct: 276 KAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALS 335
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS-GGQLVAFVGNTLVDMY 240
FS MLR + T +YSS+ A A+ +LE G VH K+ GQ VA VGN L+DMY
Sbjct: 336 LFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVA-VGNALIDMY 394
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK GSI+DA +F+ L RD VSWN+++ G + HGLG ++ F M P+++TF+
Sbjct: 395 AKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFV 454
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACS+ G LDEG+ YF MK+ +G+EP HY V L+GR+G LD+A+KFI ++P
Sbjct: 455 GVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPF 514
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP+ +W ALLGAC +H +VELG +A+R+ EL+P D H+LL+NIYA A R + A
Sbjct: 515 EPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYV 574
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK MK GVKKEP SW+E + VH F D +H +I+ ++ K ++ GY P
Sbjct: 575 RKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQL 634
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ VL + E+E L +HSE+LALAF L+ P G I I KN+R+C DCHS K SK+
Sbjct: 635 NAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKI 694
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V R+IIVRD NRFHHF +G CSC DYW
Sbjct: 695 VGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 213/419 (50%), Gaps = 9/419 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
RIVH +L + ++ + +++AY+ GC+ AR++FDE+ KDMV+WT +I+ Y++
Sbjct: 65 GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAE 124
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
ND A+ FSQM G KPN FT + VLKA G + G+ VH LK Y+ ++Y
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC-LGLQNFDAGKTVHCSVLKTNYERDLY 183
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
VG LL++Y R DDAW F + + + W+ +I+ A+ + EKAL F +M R
Sbjct: 184 VGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAF 243
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P F++SSV A A SL+ K +H H +K+G FV N L+ YAK G IE +
Sbjct: 244 VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSM 303
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
++F L R+ VSWN+++ Q G G+ + F MLR + +VT+ +L AC+
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L+ G L K + A +D+ + G + A +F+ +M W A++
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDA-RFMFDMLDLRDKVSWNAII 422
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHIL----LANIYASAGRLNDAARARKMMKE 425
MH LG A + + P L + + ++ GRL++ + MK+
Sbjct: 423 CGYSMHG---LGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 189/406 (46%), Gaps = 42/406 (10%)
Query: 49 LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
+FDEMP ++ V++ LI GY+Q+++ A LF+++ G + N F ++VLK
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLL-VSME 60
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
+ GR VH LK GY N ++G++L+D Y+ + A +F + SK+ VSW +IA
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+A +AL FS+M GF+P +F+++ V A + + GK VH V+K+ +
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
+VG L+++Y + G +DA + F + K DV+ W+ M++ AQ G + + F +M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE------------------ 330
R + PNQ TF VL A + LD + K G+ +
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 331 -------------EAHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACR 374
+ + T + + G +RAL M ++ T + ++L AC
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 375 MHKNVELG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+ELG A+ I+ D L ++YA G + DA
Sbjct: 361 TLAALELGLQVHCLTAKTIY---GQDVAVGNALIDMYAKCGSIKDA 403
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/553 (43%), Positives = 355/553 (64%), Gaps = 1/553 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H +I+ S + N ++N Y+K ++R+ F++ P K TW+++IS ++QN+
Sbjct: 37 LHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNEL 96
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P ++ +M+ L+P+ L S K+ G + D G+ VH +K GYD +V+VGS
Sbjct: 97 PWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCD-IGKSVHCLSMKTGYDADVFVGS 155
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ ++ A +F + +N V+W+ ++ G+A+ E E+AL F E L E
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+S+S+V + A++ LE G+ + IKS +FVG++LV +Y+K G +E A +VF
Sbjct: 216 NDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVF 275
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + R++ WN+ML CAQH + + F++M +G+ PN +TFL VL ACSHAGL+D
Sbjct: 276 DEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
EG+ YF LMK+ +EP + HY + VD+LGRAG L+ AL+ + MPI+PT +VWGALL +C
Sbjct: 336 EGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSC 395
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
+HKN EL A+AA+++FEL P SG HI L+N YA+ GR DAA+ARK++++ G KKE
Sbjct: 396 TIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETG 455
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
SWVE +N VH F A + H + I++K E+ E++++ GYV D+S+VL D E+
Sbjct: 456 LSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQ 515
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
++ HSE+LA+AF LI+ P I + KN+RVCGDCH+A KF S R IIVRD NRFH
Sbjct: 516 TIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFH 575
Query: 554 HFRDGFCSCGDYW 566
F DG CSC DYW
Sbjct: 576 RFEDGKCSCNDYW 588
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 152/274 (55%), Gaps = 2/274 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + VH + + + D+ + +++++ YAKCG + ARK+FDEMP++++VTW
Sbjct: 126 CGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTW 185
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ ++ GY+Q + E A+ LF + L L N ++ S+V+ A +T + GRQ+ C+
Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVC-ANSTLLELGRQIQGLCI 244
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K +D + +VGSSL+ +Y++ ++ A+ +F + +N WNA++ A+ S +K +
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIE 304
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P ++ +V A + G +++GK+ + +S + +LVDM
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLG 364
Query: 242 KSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
++G +E+A E V N + W ++LT C H
Sbjct: 365 RAGKLEEALEIVTNMPIDPTESVWGALLTSCTIH 398
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 4/319 (1%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G Q+H + +K G V ++L++ Y++ D+ F K+ +W+++I+ A+
Sbjct: 34 GLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQ 93
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+L +M+ P S + + GK VH +K+G FV
Sbjct: 94 NELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFV 153
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G++LVDMYAK G I A K+F+ + R+VV+W+ M+ G AQ G + + F++ L +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
A N +F V++ C+++ LL+ G+ L K + + V L + G L+ A +
Sbjct: 214 AVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQ 273
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASA 410
E+P+ +W A+L AC H + + + + ++ + P + + + N + A
Sbjct: 274 VFDEVPMR-NLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKP-NFITFLNVLNACSHA 331
Query: 411 GRLNDAARARKMMKESGVK 429
G +++ +MKES ++
Sbjct: 332 GLVDEGKYYFDLMKESRIE 350
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 191 FEPTHFSYSSVFTALASTG---SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
F P H +Y+ + L S+ S+ +G +H +++KSG L+ V N L++ Y+KS
Sbjct: 9 FVPCH-NYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPF 67
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
D+ + F ++ +W+S+++ AQ+ L ++ + KM+ + P+ +C
Sbjct: 68 DSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCG 127
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
D G+ L K G + + + VD+ + G + A K EMP+ G
Sbjct: 128 ILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSG 187
Query: 368 ALLGACRMHKNVELGAYAAERIFE 391
+ G +M +N E E +FE
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFE 211
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/566 (44%), Positives = 346/566 (61%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R VHA + F + + IL+ Y KCG +D ARK+FD M ++ V+W
Sbjct: 337 CADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSW 396
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY++N A+ LF +M+ G+ ++ + L A G D+ GR+VH +
Sbjct: 397 NAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE-GRRVHELLV 455
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + NV V ++L+ MY + + D A +F L K VSWNA+I G + E A+R
Sbjct: 456 RIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVR 515
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS M E +P F+ S+ ALA Q +W+H + I+ +V L+DMYA
Sbjct: 516 LFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 575
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +FN R V++WN+M+ G HG GK V FE+M +G PN+ TFL
Sbjct: 576 KCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLS 635
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSHAGL+DEGQ YF+ MK+ +G+EP HY T VDLLGRAG L A FI++MP+E
Sbjct: 636 VLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPME 695
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +V+GA+LGAC++HKNVEL +A+RIFEL+P + H+LLANIYA+A D AR R
Sbjct: 696 PGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVR 755
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
M++ G++K P S V+ KN +H F + H Q I+ + ++ E+IK +GYVPD+
Sbjct: 756 TAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTD 815
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ D + + L HSEKLA+A+ LI T PG+TI IKKN+RVC DCH+A K S V
Sbjct: 816 SIHDVEDDVKAQL-LNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVT 874
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD RFHHF+DG CSCGDYW
Sbjct: 875 GREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 162/305 (53%), Gaps = 2/305 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R VHA + + + N YAKC +AR++FD MP +D V W
Sbjct: 235 CAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAW 294
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
AL++GY++N E A+ + +M G +P+ TL SVL A A A R+VHAF
Sbjct: 295 NALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC-ADAQALGACREVHAFA 353
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G+D V V +++LD+Y + +D A +F ++ +N VSWNA+I G+A + +AL
Sbjct: 354 VRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEAL 413
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M+ EG + T S + A G L++G+ VH +++ G + V N L+ MY
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMY 473
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K + A +VF+ L + VSWN+M+ GC Q+G + VR F +M + P+ T +
Sbjct: 474 CKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLV 533
Query: 301 CVLTA 305
++ A
Sbjct: 534 SIIPA 538
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 3/294 (1%)
Query: 88 GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
G P T +S+LK A A D GR VHA G ++L +MYA+ + D
Sbjct: 220 GSGPVLRTFTSLLKLCAARA-DLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGD 278
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALA 206
A +F + +++ V+WNAL+AG+AR E A+ M E G P + SV A A
Sbjct: 279 ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+L + VHA ++ G V ++D+Y K G+++ A KVF+ + R+ VSWN+
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M+ G A++G + F++M+ G+ V+ L L AC G LDEG+ L+ + G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
+E + + + D A + E+ + T W A++ C + + E
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYK-TRVSWNAMILGCTQNGSSE 511
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/568 (42%), Positives = 358/568 (63%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C LK+L R++H L S + + ++ A KC +D+A LF M V+ +V+
Sbjct: 314 CASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVS 373
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISGY QN + A+ LFS M R G+KPN FT S++L A F ++HA
Sbjct: 374 WTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHA-----VFISEIHAEV 428
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ + VG++LLD + + + DA +F +E+K+ ++W+A++AG+A+ E E+A
Sbjct: 429 IKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAA 488
Query: 181 RTFSEMLREGFEPTHFSYSSVFTA-LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F ++ REG +P F++ S+ A A T S+EQGK HA+ IK V ++LV +
Sbjct: 489 KIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTL 548
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G+IE A ++F R +RD+VSWNSM++G AQHG K + FE+M + + + +TF
Sbjct: 549 YAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITF 608
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ V++AC+HAGL+ +GQ YF +M H + P HY +DL RAG+L +A+ I MP
Sbjct: 609 IGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMP 668
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
P A VW +L A R+H+N+ELG AAE+I L+P S ++LL+NIYA+AG ++
Sbjct: 669 FPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVN 728
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M + VKKEP SW+E KN + F+A D +HP I+ K E++ +++ +GY PD
Sbjct: 729 VRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPD 788
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+++V + +++E L HSE+LA+AF LI+T P + I KN+RVCGDCHS K S
Sbjct: 789 TNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSL 848
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V +R I+VRD+NRFHHF+ G CSCGDYW
Sbjct: 849 VEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 203/386 (52%), Gaps = 12/386 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ F+ + + N++++ +K G L +AR +FD M KD V+W ++I+G+ N Q
Sbjct: 225 IHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQ 284
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A F+ M G KP T +SV+K S A + R +H LK G N V +
Sbjct: 285 DLEAFETFNNMQLAGAKPTHATFASVIK-SCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343
Query: 134 SLLDMYARFDQMDDAWFLFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+L+ + ++DDA+ LF+ + ++ VSW A+I+G+ + + ++A+ FS M REG +
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVK 403
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P HF+YS++ T + E +HA VIK+ + + VG L+D + K G+I DA KV
Sbjct: 404 PNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKV 459
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH-AGL 311
F + +DV++W++ML G AQ G + + F ++ R GI PN+ TF ++ AC+
Sbjct: 460 FELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+++G+ + A K + + V L + G ++ A + + E W +++
Sbjct: 520 VEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMIS 578
Query: 372 ACRMH----KNVELGAYAAERIFELD 393
H K +E+ +R E+D
Sbjct: 579 GYAQHGQAKKALEVFEEMQKRNLEVD 604
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 165/325 (50%), Gaps = 1/325 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A++LFD+ P++D+ L+ YS+ DQ + A+ LF + R GL P+ +T+S VL A
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC-A 113
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
G+ + G QVH C+K G ++ VG+SL+DMY + + D +F + ++ VSWN+
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNS 173
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
L+ G++ ++ F M EG+ P +++ S+V ALA+ G++ G +HA V+K G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ V N+L+ M +KSG + DA VF+ + +D VSWNSM+ G +G F
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
M G P TF V+ +C+ L + K G+ + + L +
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353
Query: 346 LLDRALKFIREMPIEPTAAVWGALL 370
+D A M + W A++
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMI 378
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 185/361 (51%), Gaps = 9/361 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + +++ N++++ Y K G + + R++FDEM +D+V+W +L++GYS N
Sbjct: 124 VHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRF 183
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ LF M G +P+ +T+S+V+ A + GA G Q+HA +K G++ V
Sbjct: 184 NDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAV--AIGMQIHALVVKLGFETERLVC 241
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+SL+ M ++ + DA +F +E+K+ VSWN++IAGH + +A TF+ M G +
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAK 301
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PTH +++SV + AS L + +H +KSG V L+ K I+DA +
Sbjct: 302 PTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSL 361
Query: 253 FNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
F+ + + VVSW +M++G Q+G V F M R G+ PN T+ +LT HA
Sbjct: 362 FSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVF 420
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ E A + K E + +D + G + A+K + + A W A+L
Sbjct: 421 ISE---IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIA-WSAMLA 476
Query: 372 A 372
Sbjct: 477 G 477
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/565 (40%), Positives = 356/565 (63%), Gaps = 2/565 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L L +HA + F+ D + N ++ Y K G + + ++F+ +D+++W
Sbjct: 442 TDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWN 501
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
AL+SG+ N+ + + +F+QML G PN +T S+L+ S + +D G+QVHA +K
Sbjct: 502 ALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILR-SCSSLSDVDLGKQVHAQIVK 560
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
D N +VG++L+DMYA+ ++DA +F L ++ +W ++AG+A+ +GEKA++
Sbjct: 561 NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKC 620
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M REG +P F+ +S + + +L+ G+ +H+ IK+G FV + LVDMYAK
Sbjct: 621 FIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAK 680
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +EDAE VF+ L+ RD VSWN+++ G +QHG G ++ FE ML G P++VTF+ V
Sbjct: 681 CGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGV 740
Query: 303 LTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ACSH GL++EG+ +F +L K +G+ P HY VD+LGRAG FI EM +
Sbjct: 741 LSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTS 800
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+W +LGAC+MH N+E G AA ++FEL+P +ILL+N++A+ G +D R
Sbjct: 801 NVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRA 860
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M GVKKEP CSWVE VH+F+++D +HP+ IH K +++ +K+ +GY P++ H
Sbjct: 861 LMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDH 920
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL +E++ L HSE+LALAFAL+ST TI I KN+R+CGDCH K S++
Sbjct: 921 VLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITN 980
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
+E++VRD N FHHF++G CSC ++W
Sbjct: 981 QELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 209/389 (53%), Gaps = 6/389 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L E + +H ++ S D + N+++N YAKCG + A K+F E+P +D+V+W
Sbjct: 138 CASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSW 197
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALI+G+ A+ LF +M R G++ N+FT ++ LKA D +FG+QVHA +
Sbjct: 198 TALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSM-CLDLEFGKQVHAEAI 256
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +++VGS+L+D+YA+ +M A +F + +N VSWNAL+ G A+ + EK L
Sbjct: 257 KVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLN 316
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M + F+ S+V A++G+L G+ VH+ I+ G +L F+ LVDMY+
Sbjct: 317 LFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYS 376
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G DA KVF R+ DVVSW++++T Q G + F++M +G+ PNQ T
Sbjct: 377 KCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLAS 436
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+++A + G L G+ A + K+G E + V + + G + + + E
Sbjct: 437 LVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCR-VFEATTNR 495
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIF 390
W ALL ++ + G RIF
Sbjct: 496 DLISWNALLSGFHDNETCDTGL----RIF 520
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 186/349 (53%), Gaps = 1/349 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ + VHA + +D+ + + +++ YAKCG + A ++F MP ++ V+W
Sbjct: 239 CSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSW 298
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL++G++Q E + LF +M + ++FTLS+VLK A + + + G+ VH+ +
Sbjct: 299 NALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGC-ANSGNLRAGQIVHSLAI 357
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + ++ L+DMY++ DA +F +E + VSW+A+I +K + +A
Sbjct: 358 RIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAE 417
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G P F+ +S+ +A G L G+ +HA V K G + V N LV MY
Sbjct: 418 VFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYM 477
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS++D +VF RD++SWN++L+G + +R F +ML G PN TF+
Sbjct: 478 KIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFIS 537
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+L +CS +D G+ A + K+ ++ + VD+ + L+ A
Sbjct: 538 ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 586
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 179/342 (52%), Gaps = 26/342 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + VHA I+ ++ + + +++ YAK L++A +F+ + +D+ W
Sbjct: 542 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 601
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +++GY+Q+ Q E A+ F QM R G+KPN+FTL+S L AT D GRQ+H+ +
Sbjct: 602 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDS-GRQLHSMAI 660
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +++V S+L+DMYA+ ++DA +F L S++ VSWN +I G+++ +G KAL+
Sbjct: 661 KAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALK 720
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT------ 235
F ML EG P ++ V +A + G +E+GK K L G T
Sbjct: 721 AFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGK-------KHFNSLSKIYGITPTIEHY 773
Query: 236 --LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LG-KATVRWFEKML 288
+VD+ ++G + E + L +V+ W ++L C HG G +A ++ FE L
Sbjct: 774 ACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE--L 831
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
I N + + A G+ D+ ALM GV+ E
Sbjct: 832 EPEIDSNYILLSNMFAA---KGMWDDVTNVRALMSTRGVKKE 870
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
YS + AS G L +GK +H VIKSG + + N+LV++YAK GS A KVF +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+RDVVSW +++TG G G V F +M R G+ N+ T+ L ACS L+ G+
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
A K G + VDL + G + A + MP + A W ALL
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALL 302
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 360/597 (60%), Gaps = 33/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
C L E + +HAH+L F +D+ + +++N YA+ G
Sbjct: 139 CAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISF 198
Query: 42 -----------CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+D AR+LFDEMPVKD+V+W A+I+GY+Q + + A++LF M + +
Sbjct: 199 TALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN+ T+ SVL A D G + ++ G N+ + ++L+DMY++ + A
Sbjct: 259 PNESTIVSVLSACAQSNALD-LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARE 317
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + ++ +SWN +I G+ ++AL F EML G EPT ++ S+ + A G+
Sbjct: 318 LFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA 377
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
++ GKW+HA++ K+ + + +L+D+YAK G+I A +VF+ + + + SWN+M+ G
Sbjct: 378 IDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICG 437
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEP 329
A HG F KM +GI PN++TF+ +L+AC HAGL+D GQ +F+ +++ + + P
Sbjct: 438 LAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISP 497
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+ HY +DLLGRAGL + A ++ M ++P A+WG+LLGACR H VELG AER+
Sbjct: 498 KSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERL 557
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
FEL+P + G ++LL+NIYA AG+ +D AR R + + G+KK P C+ +E N VH F+
Sbjct: 558 FELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVG 617
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D HPQ I++ E+ E++K G+V D+S VL D++ +E L HSEKLA+AF LI
Sbjct: 618 DKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLI 677
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
ST PG+ I I KN+RVC +CHSA K SK+ REII RD NRFHHF+DG CSC DYW
Sbjct: 678 STKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 219/429 (51%), Gaps = 53/429 (12%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDI-AMQNTI-LNAYAKCGCLDEARKLFDEMPVKDM 58
KC ++ K+ +HAHI+ + N + A+ I +A ++ G + A LF+ + ++
Sbjct: 38 KCQSIRTFKQ---IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNL 94
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W ++I G S + P A++ F +M+ G++PN +T +LK+ A+ + G+Q+HA
Sbjct: 95 FIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHE-GKQIHA 153
Query: 119 FCLKYGYDWNVYVGSSLLDMYAR----------FDQ---------------------MDD 147
LK G+ +V++ +SL++MYA+ FDQ MD
Sbjct: 154 HVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDR 213
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + K+ VSWNA+IAG+A+ ++AL F +M + P + SV +A A
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273
Query: 208 TGSLEQGK----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ +L+ G W+ + S +LV N L+DMY+K G ++ A ++F+ +L+RDV+S
Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLV----NALIDMYSKCGDLQTARELFDDMLERDVIS 329
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN M+ G K + F +ML +G+ P ++TFL +L +C+H G +D G+ A +
Sbjct: 330 WNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYIN 389
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
K+ + + +DL + G + A + M I+ A+ W A++ MH
Sbjct: 390 KNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMICGLAMHGQ----- 443
Query: 384 YAAERIFEL 392
A++ FEL
Sbjct: 444 --ADKAFEL 450
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 49/321 (15%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA--KSGSIEDAEKVFNRLLKRDVV 262
L+ S+ K +HAH+IK+G F + L++ A +SG I A +FN + + ++
Sbjct: 36 LSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLF 95
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
WNSM+ G + + +F +M+ +G+ PN TF +L +C+ EG+ A +
Sbjct: 96 IWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHV 155
Query: 323 KKHGVEPEEAHYVTFVDLLGRA-------------------------------GLLDRAL 351
K G + + + +++ ++ G +DRA
Sbjct: 156 LKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRAR 215
Query: 352 KFIREMPIEPTAAVWGALL-GACRMHKNVE-LGAYAAERIFELDPHDSGPHILLANIYAS 409
+ EMP++ + W A++ G +M ++ E L + R + P++S +L+ A
Sbjct: 216 QLFDEMPVKDVVS-WNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC-AQ 273
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNA-VHMFVANDDAHPQRAMIHKKWRE--I 466
+ L+ R +++ G+ CS ++ NA + M+ D R + I
Sbjct: 274 SNALDLGNSMRSWIEDRGL-----CSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVI 328
Query: 467 SEKIKQIGYVPDSSHVLSYAD 487
S + GY +H+ SY +
Sbjct: 329 SWNVMIGGY----THMCSYKE 345
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/563 (42%), Positives = 349/563 (61%), Gaps = 3/563 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + + +H + + S F + + + +++ YAKCG L+ AR+LFD M +++V+W ++
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I Y QN+ P+ A+++F +ML G+KP ++ L A A D + GR +H ++ G
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC-ADLGDLERGRFIHKLSVELG 367
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D NV V +SL+ MY + ++D A +F L+S+ VSWNA+I G A+ AL FS
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M +P F+Y SV TA+A KW+H V++S FV LVDMYAK G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+I A +F+ + +R V +WN+M+ G HG GKA + FE+M + I PN VTFL V++
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+GL++ G F +MK+ + +E HY VDLLGRAG L+ A FI +MP++P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
V+GA+LGAC++HKNV AAER+FEL+P D G H+LLANIY +A + R M
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
G++K P CS VE KN VH F + AHP I+ ++ IK+ GYVPD++ VL
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ +E L HSEKLA++F L++T G+TIH++KN+RVC DCH+A K+ S V RE
Sbjct: 728 G-VENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 786
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I+VRD RFHHF++G CSCGDYW
Sbjct: 787 IVVRDMQRFHHFKNGACSCGDYW 809
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 197/374 (52%), Gaps = 13/374 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIA----MQNTILNAYAKCGCLDEARKLFDEMPVK 56
+C+ LK+L++ IL FKN + Q +++ + + G +DEA ++F+ + K
Sbjct: 46 RCSSLKELRQ-------ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
V + ++ G+++ + A+ F +M ++P + + +LK G A + + G+++
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA-ELRVGKEI 157
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H +K G+ +++ + L +MYA+ Q+++A +F + ++ VSWN ++AG+++
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL M E +P+ + SV A+++ + GK +H + ++SG + + L
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDMYAK GS+E A ++F+ +L+R+VVSWNSM+ Q+ K + F+KML G+ P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
V+ + L AC+ G L+ G+ L + G++ + + + + + +D A +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 357 MPIEPTAAVWGALL 370
+ T W A++
Sbjct: 398 LQ-SRTLVSWNAMI 410
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 7/290 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R +H + ++++ N++++ Y KC +D A +F ++ + +V+W
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G++QN +P +A+ FSQM +KP+ FT SV+ A A + + +H +
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI-AELSITHHAKWIHGVVM 465
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D NV+V ++L+DMYA+ + A +F + ++ +WNA+I G+ G+ AL
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM + +P ++ SV +A + +G +E G K + +L +VD+
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLL 585
Query: 241 AKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG----LGKATVRWFE 285
++G + +A + + +K V + +ML C H KA R FE
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 1/168 (0%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
L SL++ + + V K+G F LV ++ + GS+++A +VF + + V +
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
++ML G A+ +++F +M + + P F +L C L G+ L+ K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G + ++ + ++ A K MP E W ++
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAG 210
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/525 (44%), Positives = 343/525 (65%), Gaps = 2/525 (0%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
+D RK+F+ MP KD+V+W +I+G ++N + + +M LKP+ FTLSSVL
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
A D G+++H ++ G D VYV SSL+DMYA+ ++ D++ +FT L ++ +S
Sbjct: 310 I-AENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGIS 368
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN++IAG + ++ L+ F +ML +P +S+SS+ A A +L GK +H ++
Sbjct: 369 WNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 428
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
++G F+ ++LVDMYAK G+I A ++F+R+ RD+VSW +M+ GCA HG +
Sbjct: 429 RNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIE 488
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLL 341
FE+M GI PN V F+ VLTACSHAGL+DE YF M G+ P HY DLL
Sbjct: 489 LFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLL 548
Query: 342 GRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI 401
GRAG L+ A FI MPI PT +VW LL ACR+HKNV++ A RI E+DP ++G +I
Sbjct: 549 GRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYI 608
Query: 402 LLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK 461
LLANIY++A R +AA+ R ++ +G++K PACSW+E +N V+ F+A D++HP I +
Sbjct: 609 LLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIRE 668
Query: 462 KWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKK 521
+ E +++ GYVPD+S V ++++++ + HSE+LA+ F +I+TP G+TI + K
Sbjct: 669 AMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTK 728
Query: 522 NIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
N+RVC DCH+A KF SK+V REI+VRD +RFHHF++G CSCGDYW
Sbjct: 729 NLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 139/269 (51%), Gaps = 3/269 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+ + + +H + ++ + +++++ YAKC + ++ ++F + +D ++W ++I+G
Sbjct: 316 ISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAG 375
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
QN + + F QML +KP ++ SS++ A A T G+Q+H + + G+D
Sbjct: 376 CVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPAC-AHLTTLHLGKQLHGYITRNGFDE 434
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N+++ SSL+DMYA+ + A +F + ++ VSW A+I G A A+ F +M
Sbjct: 435 NIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMK 494
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
EG EP + ++ +V TA + G +++ K+ ++ + G + D+ ++G +
Sbjct: 495 TEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRL 554
Query: 247 EDAEKVFNRLLKRDVVS-WNSMLTGCAQH 274
E+A + S W ++L+ C H
Sbjct: 555 EEAYDFICGMPIGPTGSVWATLLSACRVH 583
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/579 (19%), Positives = 221/579 (38%), Gaps = 92/579 (15%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+ L ++ +LF+ + + W ++I Y+ + P ++ F ML GL P+
Sbjct: 52 YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
SVLKA A D G +H + ++ G D+++Y G++L++MY++ F
Sbjct: 112 PSVLKAC-AMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLR--------FLKKS 162
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+ + + ++ +E +++RT S ++ G + S F S S E
Sbjct: 163 GRQRLGASQVL---DEMTERTRSVRTASVLV--GNQGRKVSDIEAFNYDVSCRSREFEAQ 217
Query: 217 VHAHVIKSGGQLVAF----VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
V K + +G + D+ + S S++ K+F + ++D+VSWN+++ G A
Sbjct: 218 VLEIDYKPRSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNA 276
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
++GL T+ +M + P+ T VL + + +G+ + G++ E
Sbjct: 277 RNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVY 336
Query: 333 HYVTFVDLLGRA-------------------------------GLLDRALKFIREM---P 358
+ +D+ + GL D LKF R+M
Sbjct: 337 VASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK 396
Query: 359 IEPTAAVWGALLGAC----RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
I+P + + +++ AC +H +L Y F+ + + L ++YA G +
Sbjct: 397 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS---LVDMYAKCGNIR 453
Query: 415 ------DAARARKMMKESGVK----------------KEPACSWVETKNAVHMFVANDDA 452
D R R M+ + + ++ +E M V +
Sbjct: 454 TARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACS 513
Query: 453 HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI-ST 511
H ++ + W+ + G P H + +D R +L+ A+ I
Sbjct: 514 HA--GLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEE-------AYDFICGM 564
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
P G T + + H A KV R + V N
Sbjct: 565 PIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKN 603
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 83/148 (56%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + +H +I + F +I + +++++ YAKCG + AR++FD M ++DMV+W
Sbjct: 411 CAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSW 470
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + + +AI LF QM G++PN +VL A D+ + ++ L
Sbjct: 471 TAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTL 530
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+G V +++ D+ R ++++A+
Sbjct: 531 DFGIAPGVEHYAAVSDLLGRAGRLEEAY 558
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
+Y+ + + D+ LF L ++W ++I + K+L +F ML G P H
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+ SV A A L G+ +H ++I+ G + GN L++MY+K
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK 155
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
S S Q + +HA V+K + + + L+ +Y+ + D+ ++FN L ++W S
Sbjct: 20 SIKSRSQAQQLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTLHFPPALAWKS 78
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++ HGL ++ F ML +G+ P+ F VL AC+ L+ G+ + + G
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 327 VE 328
++
Sbjct: 139 LD 140
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/568 (43%), Positives = 354/568 (62%), Gaps = 16/568 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCG--------------CLDEARKLFDEMPVKDMV 59
+HA L S D N +LN Y K L+ RK+FDEMP KD+V
Sbjct: 80 LHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W L+ G +++ + A+ L +M R G KP+ FTLSSVL GA D + G ++H F
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGA-DVRRGMELHGF 198
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ G+ +V+VGSSL+DMYA + D + +F L ++ + WN+++AG A+ ++A
Sbjct: 199 ATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEA 258
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F ML G +P ++SS+ A + SL GK +HA+VI+ G F+ ++L+DM
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G++ A ++F+R+ D+VSW +M+ G A HG + + F++M + PN +TF
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L VLTACSHAGL+D+G YF M H G+ P H+ D LGR G L+ A FI M
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK 438
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
I+PTA+VW LL AC++HKN L A++IF+L+P G HI+L+N Y+S+GR N+AA
Sbjct: 439 IKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAH 498
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK M++ G++KEPACSW+E KN H+FVA+D +HP I SE++ + GYVP+
Sbjct: 499 LRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPN 558
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ V +++++ + L HSEKLA+ F +ISTPPG+TI + KN+RVC DCH+ KF SK
Sbjct: 559 TDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISK 618
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V REI++RD NRFHHF+DG CSCGD+W
Sbjct: 619 IVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L + +HA+++ F ++ + +++++ Y KCG + AR++FD + D+V+W
Sbjct: 284 CGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSW 343
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G++ + A++LF +M LKPN T +VL A DK + ++
Sbjct: 344 TAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSD 403
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALI 167
YG ++ ++L D R ++++A+ + ++ K S W+ L+
Sbjct: 404 HYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 199 SSVFTAL-------ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK--------- 242
SSV T+L A+ G G +HA ++SG F N L+++Y K
Sbjct: 55 SSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSP 114
Query: 243 --SGS---IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
GS +E KVF+ + ++DVVSWN+++ GCA+ G + +M R+G P+
Sbjct: 115 EMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSF 174
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T VL + + G ++G + + +D+ D ++K +
Sbjct: 175 TLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNL 234
Query: 358 PIEPTAAVWGALLGACRMHKNVE 380
P+ A +W ++L C + +V+
Sbjct: 235 PVR-DAILWNSMLAGCAQNGSVD 256
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/546 (42%), Positives = 356/546 (65%), Gaps = 6/546 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ M NT++ +C ++++R+LF +M KD ++WTA+I+G++QN AI LF +
Sbjct: 205 EKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFRE 264
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M L+ +Q+T SVL A G G + G+QVHA+ ++ Y N++VGS+L+DMY +
Sbjct: 265 MRLENLEMDQYTFGSVLTACG-GVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCK 323
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ A +F + KN VSW A++ G+ + E+A++ F +M G EP F+ SV +
Sbjct: 324 SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVIS 383
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAF--VGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
+ A+ SLE+G H + SG L++F V N LV +Y K GSIED+ ++F+ + D
Sbjct: 384 SCANLASLEEGAQFHCRALVSG--LISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDE 441
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-A 320
VSW ++++G AQ G T+R FE ML +G P++VTF+ VL+ACS AGL+ +G F +
Sbjct: 442 VSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFES 501
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
++K+H + P E HY +DL RAG L+ A KFI +MP P A W +LL +CR H+N+E
Sbjct: 502 MIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNME 561
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
+G +AAE + +L+PH++ +ILL++IYA+ G+ + A RK M++ G++KEP CSW++ K
Sbjct: 562 IGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYK 621
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
N VH+F A+D ++P I+ + +++ K+ Q GYVPD + VL D E+ L HSE
Sbjct: 622 NQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSE 681
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
KLA+AF LI PPG I + KN+RVCGDCH+A K+ SK+ +REI+VRD RFH F+DG C
Sbjct: 682 KLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRC 741
Query: 561 SCGDYW 566
SCGD+W
Sbjct: 742 SCGDFW 747
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 192/375 (51%), Gaps = 36/375 (9%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-L 89
NT+L++Y+K CL E ++F MP +DMV+W +LIS Y+ ++ ++ ML G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 90 KPNQFTLSSVL-KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR------- 141
N+ LS++L AS G G QVH +K+G+ V+VGS L+DMY++
Sbjct: 139 NLNRIALSTMLILASKQGCV--HLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCA 196
Query: 142 ---FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
FD+M +D+ LF ++ K+ +SW A+IAG +
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A+ F EM E E +++ SV TA +L++GK VHA++I++ Q FVG+ LV
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY K SI+ AE VF ++ ++VVSW +ML G Q+G + V+ F M NGI P+
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T V+++C++ L+EG + G+ V L G+ G ++ + + EM
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436
Query: 358 PIEPTAAVWGALLGA 372
+ W AL+
Sbjct: 437 SYVDEVS-WTALVSG 450
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 157/275 (57%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+E + VHA+I+ + ++++I + + +++ Y KC + A +F +M K++V+W
Sbjct: 284 CGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSW 343
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY QN E A+ +F M G++P+ FTL SV+ + A+ ++ G Q H L
Sbjct: 344 TAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE-GAQFHCRAL 402
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++D+ LF+ + +EVSW AL++G+A+ + + LR
Sbjct: 403 VSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLR 462
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMY 240
F ML GF+P ++ V +A + G +++G + +IK + + ++D++
Sbjct: 463 LFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLF 522
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+++G +E+A K N++ D + W S+L+ C H
Sbjct: 523 SRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 33/275 (12%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N+Y ++LL Y++ + + +F A+ +++ VSWN+LI+ +A + ++++ ++ ML
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 188 REG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG-- 244
G F + S++ + G + G VH HV+K G Q FVG+ LVDMY+K+G
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 245 -----------------------------SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
IED+ ++F + ++D +SW +M+ G Q+G
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
L + + F +M + +Q TF VLTAC L EG+ A + + +
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
VD+ + + A R+M + + W A+L
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVS-WTAML 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 43/195 (22%)
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT----- 269
K +H H+IK+ F+ N LV YAK I A +VF+++ +R++ SWN++L+
Sbjct: 29 KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88
Query: 270 GC--------------------------AQHGLGKATVRWFEKMLRNG------IAPNQV 297
C A G +V+ + ML NG IA + +
Sbjct: 89 ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L C H GL G + K G + VD+ + GL+ A + EM
Sbjct: 149 LILASKQGCVHLGLQVHGH-----VVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEM 203
Query: 358 PIEPTAAVWGALLGA 372
P E ++ L+
Sbjct: 204 P-EKNVVMYNTLIAG 217
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/558 (43%), Positives = 365/558 (65%), Gaps = 2/558 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E HA I+ + D N ++N Y+KCG ++ ARKLFDEMPV+ +V+W ++ ++
Sbjct: 65 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
QN E A++LF QM + G ++FT+SSV+ A A + +Q+H F LK D NV
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFE-CKQLHGFALKTALDSNV 183
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VG++LLD+YA+ + DA +F + +++V+W++++AG+ + E+AL F
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G E F+ SS +A A+ +L +GK V A K+G FV ++L+DMYAK G IE+A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF+ + +++VV WN++L+G ++H + +FEKM + GI PN +T++ VL+ACSH
Sbjct: 304 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 363
Query: 310 GLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+++G+ YF LM + H V P HY VD+LGRAGLL A FI MP + TA++WG+
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 423
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL +CR+++N+EL AA+ +FE++PH++G H+LL+NIYA+ R + ARAR ++KES
Sbjct: 424 LLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKA 483
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KKE SW+E K+ VH F+ + HP+ I+ K ++ ++K+IGY + H L ++
Sbjct: 484 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEE 543
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
++ L+ HSEKLAL F ++ P G+ I I KN+R+CGDCHS K AS + EREIIVRD
Sbjct: 544 SRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRD 603
Query: 549 TNRFHHFRDGFCSCGDYW 566
TNRFHHF++G+CSCG++W
Sbjct: 604 TNRFHHFKNGYCSCGEFW 621
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/570 (40%), Positives = 368/570 (64%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L A +H + + +++ + N +++ Y K G L+E RK+FD M +D+VTW
Sbjct: 180 CVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTW 239
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISG+ Q Q +A+ +F M G+ P+ TL S L ++ A D GR VH + +
Sbjct: 240 NSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLS-LASAIAQCGDICGGRSVHCYMV 298
Query: 122 KYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+D ++ G++++DMYA+ +++ A +F ++ ++ VSWN LI G+ + +A+
Sbjct: 299 RRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAI 358
Query: 181 RTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M + EG +P ++ SV A + G+L+QG +HA IK+G L +VG ++D+
Sbjct: 359 HVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDL 418
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G +++A +F + +R WN++++G HG G + F +M + GI+P+ VTF
Sbjct: 419 YAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTF 478
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ +L ACSHAGL+D+G+ +F +M+ +G++P HY VD+ GRAG LD A FIR MP
Sbjct: 479 VSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMP 538
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
I+P +A+WGALLGACR+H NVE+G A++ +FELDP + G ++L++N+YA G+ +
Sbjct: 539 IKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDE 598
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVAND--DAHPQRAMIHKKWREISEKIKQIGYV 476
R +++ ++K P S +E K +V++F + + + HPQ I ++ ++ KI+ +GYV
Sbjct: 599 VRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYV 658
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD S VL ++ E+E L HSE+LA+AF +I+TPP + +HI KN+RVCGDCH+A K+
Sbjct: 659 PDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYI 718
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ EREIIVRD+NRFHHF+DG+CSCGD+W
Sbjct: 719 SKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 220/424 (51%), Gaps = 19/424 (4%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
+ D +++AY + G + +A + FDEM +D+ W A++SG +N + A+ LF
Sbjct: 100 LRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFG 159
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+M+ G+ + T+SSVL D +H + +K+G D ++V ++++D+Y +
Sbjct: 160 RMVMEGVAGDAVTVSSVLPMC-VLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKL 218
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+++ +F + S++ V+WN++I+GH + + A+ F M G P + S+
Sbjct: 219 GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA 278
Query: 203 TALASTGSLEQGKWVHAHVIKSG---GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
+A+A G + G+ VH ++++ G G ++A GN +VDMYAK IE A+++F+ + R
Sbjct: 279 SAIAQCGDICGGRSVHCYMVRRGWDVGDIIA--GNAIVDMYAKLSKIEAAQRMFDSMPVR 336
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGY 318
D VSWN+++TG Q+GL + ++ M ++ G+ P Q TF+ VL A SH G L +G
Sbjct: 337 DAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRM 396
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
AL K G+ + +DL + G LD A+ + P T W A++ +H +
Sbjct: 397 HALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP-WNAVISGVGVHGH 455
Query: 379 VELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDAARARKMMKES-GVK---K 430
GA A ++ P H+ ++ A+ AG ++ MM+ + G+K K
Sbjct: 456 ---GAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAK 512
Query: 431 EPAC 434
AC
Sbjct: 513 HYAC 516
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 7/281 (2%)
Query: 92 NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWF 150
+ FT +L+A+ T Q+HA L+ G + + +L+ Y RF ++ DA+
Sbjct: 70 DAFTFPPLLRAAQGPGT----AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYR 125
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F + ++ +WNA+++G R + +A+ F M+ EG + SSV G
Sbjct: 126 AFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGD 185
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+H + +K G FV N ++D+Y K G +E+ KVF+ + RD+V+WNS+++G
Sbjct: 186 RALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q G + V F M +G++P+ +T L + +A + G + G+ M + G +
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305
Query: 331 E-AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ VD+ + ++ A + MP+ A W L+
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSWNTLI 345
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/566 (42%), Positives = 369/566 (65%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ + +H +L + F+ ++ + + +++ YAK G LD A K+F + KD+V+W
Sbjct: 483 CSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSW 542
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+GY+Q+++ A+ LF +M G+ + +S + A AG G+Q+HA
Sbjct: 543 TAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISAC-AGIQALNQGQQIHAQAC 601
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY ++ VG++L+ +YAR ++ DA+F F + SK+ +SWN+LI+G A+ E+AL
Sbjct: 602 VSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALS 661
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M + G E F++ +A A+ +++ GK +HA +IK+G V N L+ +YA
Sbjct: 662 LFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYA 721
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+I+DAE+ F + +++ +SWN+MLTG +QHG G + FE M + G+ PN VTF+
Sbjct: 722 KCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVG 781
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+DEG YF M++ HG+ P+ HY VDLLGR+GLL RA +F+ EMPI+
Sbjct: 782 VLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQ 841
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A V LL AC +HKN+++G +AA + EL+P DS ++LL+N+YA G+ R R
Sbjct: 842 PDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTR 901
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MMK+ GVKKEP SW+E N+VH F A D HP I++ R+++E + GY+P ++
Sbjct: 902 QMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTN 961
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L+ A+++++ +HSEKLA+AF L+S + IH+ KN+RVCGDCH+ K+ SK+
Sbjct: 962 SLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKIS 1021
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R I+VRD+ RFHHF+ G CSC DYW
Sbjct: 1022 DRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 186/364 (51%), Gaps = 2/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + ++N + + N +++ Y K G L+ A+K+FD + +D V+W A++SG SQ+
Sbjct: 192 IHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGC 251
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A++LF QM G+ P + SSVL A K G Q+H LK G+ YV +
Sbjct: 252 EEEAVLLFCQMHTSGVYPTPYIFSSVLSAC-TKVEFYKVGEQLHGLVLKQGFSLETYVCN 310
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ +Y+R A +F A+ ++EVS+N+LI+G +++ +KAL F +M + +P
Sbjct: 311 ALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKP 370
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ +A +S G+L GK H++ IK+G + L+D+Y K I+ A + F
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF 430
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+VV WN ML + + F +M GI PNQ T+ +L CS +D
Sbjct: 431 LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVD 490
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ + K G + +D+ + G LD ALK R + E W A++
Sbjct: 491 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGY 549
Query: 374 RMHK 377
H+
Sbjct: 550 AQHE 553
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 258/543 (47%), Gaps = 61/543 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H IL F ++ + +++ Y G LD A +FDEMPV+ + W ++ +
Sbjct: 90 LHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKM 149
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ LF +ML+ +KP++ T + VL+ G G ++HA + +GY+ +++V +
Sbjct: 150 AGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCN 209
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D+Y + ++ A +F L+ ++ VSW A+++G ++ E+A+ F +M G P
Sbjct: 210 PLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYP 269
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T + +SSV +A + G+ +H V+K G L +V N LV +Y++ G+ AE+VF
Sbjct: 270 TPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVF 329
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N +L+RD VS+NS+++G +Q G + F+KM + + P+ VT +L+ACS G L
Sbjct: 330 NAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALL 389
Query: 314 EGQGYFALMKKHG----------------------------VEPEEAHYVTFVDLLGRAG 345
G+ + + K G + E + V + +L G
Sbjct: 390 VGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYG 449
Query: 346 LLD---RALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAERI----FELDPH 395
LLD + K +M IEP + ++L C + V+LG ++ F+ + +
Sbjct: 450 LLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVY 509
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
S +L ++YA G+L+ A + + +KE V SW +A H +
Sbjct: 510 VSS---VLIDMYAKLGKLDHALKIFRRLKEKDV-----VSWTA-------MIAGYAQHEK 554
Query: 456 RAMIHKKWREISEK---IKQIGYVPDSS-----HVLSYADQQEREAKLQVHSEKLALAFA 507
A ++E+ ++ IG+ S L+ Q +A + +S+ L++ A
Sbjct: 555 FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNA 614
Query: 508 LIS 510
L+S
Sbjct: 615 LVS 617
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 183/345 (53%), Gaps = 3/345 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT ++ K +H +L F + + N ++ Y++ G A ++F+ M +D V++
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSY 340
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+LISG SQ + A+ LF +M LKP+ T++S+L A S GA G+Q H++
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGAL--LVGKQFHSYA 398
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G ++ + +LLD+Y + + A F + E++N V WN ++ + ++
Sbjct: 399 IKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESF 458
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F++M EG EP F+Y S+ +S +++ G+ +H V+K+G Q +V + L+DMY
Sbjct: 459 KIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 518
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G ++ A K+F RL ++DVVSW +M+ G AQH + F++M GI + + F
Sbjct: 519 AKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFA 578
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
++AC+ L++GQ A G + + V L R G
Sbjct: 579 SAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCG 623
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 148/348 (42%), Gaps = 38/348 (10%)
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFC 120
TAL YS ++ N I M G++ N T +L +G D G ++H
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSD--GWKLHGKI 94
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK G+ V + L+D+Y F +D A +F + + WN ++ + L
Sbjct: 95 LKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVL 154
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTG-SLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F ML+E +P +Y+ V + +HA I G + FV N L+D+
Sbjct: 155 GLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDL 214
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K+G + A+KVF+ L KRD VSW +ML+G +Q G + V F +M +G+ P F
Sbjct: 215 YFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIF 274
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHG-------------------------------VE 328
VL+AC+ G+ L+ K G ++
Sbjct: 275 SSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ 334
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIE---PTAAVWGALLGAC 373
+E Y + + L + G D+AL+ ++M ++ P +LL AC
Sbjct: 335 RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 102/273 (37%), Gaps = 25/273 (9%)
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFE 192
S+++ +F + +F F + N ++ EGE F ++ E G
Sbjct: 11 SIVNKIKQFRPVVSIFFFFQKF-----LEHNTALSYAYSNDEGEANGINFLHLMEERGVR 65
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+Y + S+G G +H ++K G + L+D+Y G ++ A V
Sbjct: 66 ANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTV 125
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL- 311
F+ + R + WN +L + + F +ML+ + P++ T+ VL C +
Sbjct: 126 FDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVP 185
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ A HG E +DL + G L+ A K + + + W A+L
Sbjct: 186 FHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS-WVAMLS 244
Query: 372 A--------------CRMHKNVELGAYAAERIF 390
C+MH + G Y IF
Sbjct: 245 GLSQSGCEEEAVLLFCQMHTS---GVYPTPYIF 274
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/570 (42%), Positives = 363/570 (63%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
C + L R H ++ S D+ + ++++ YAKC G +D+ARK+FD MPV ++
Sbjct: 155 CAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNV 214
Query: 59 VTWTALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTA+I+GY Q+ + AI LF +M++ +KPN FT SSVLKA A +D G QV+
Sbjct: 215 MSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKAC-ANLSDIWLGEQVY 273
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A +K VG+SL+ MY+R M++A F L KN VS+N ++ +A+ E
Sbjct: 274 ALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSE 333
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F+E+ G F+++S+ + +S G++ +G+ +H+ ++KSG + + N L+
Sbjct: 334 EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALI 393
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VFN + +V+SW SM+TG A+HG + F KML G++PN+V
Sbjct: 394 SMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEV 453
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH GL+ EG +F MK +HG+ P HY VDLLGR+G L+ A++ +
Sbjct: 454 TYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNS 513
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP + A V LGACR+H N++LG +AAE I E DPHD +ILL+N++ASAG+ +
Sbjct: 514 MPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEV 573
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A RK MKE + KE CSW+E +N VH F D +HPQ I+ + +++ KIK++GY+
Sbjct: 574 AEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYI 633
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P + VL +++++E L HSEK+A+A+ IST I + KN+RVCGDCH+AFK+
Sbjct: 634 PSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYF 693
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S V +EI++RD NRFHHF+DG CSC DYW
Sbjct: 694 SIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 196/362 (54%), Gaps = 7/362 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKC-GCLDEARKLFDEMPVKDMV 59
C++ + + +I+ +L + F++D+ + +++ + K G L+ A K+FD MP +++V
Sbjct: 52 CSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVV 111
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
TWT +I+ + Q +A+ LF M+ G P++FTLS V+ A A GRQ H
Sbjct: 112 TWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSAC-AEMGLLSLGRQFHCL 170
Query: 120 CLKYGYDWNVYVGSSLLDMYARF---DQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
+K G D +V VG SL+DMYA+ +DDA +F + N +SW A+I G+ +
Sbjct: 171 VMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGC 230
Query: 177 EK-ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
++ A+ F EM++ +P HF++SSV A A+ + G+ V+A V+K + VGN+
Sbjct: 231 DREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNS 290
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+ MY++ G++E+A K F+ L ++++VS+N+++ A+ + F ++ G N
Sbjct: 291 LISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVN 350
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
TF +L+ S G + +G+ + + K G + + + R G ++ A +
Sbjct: 351 AFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFN 410
Query: 356 EM 357
EM
Sbjct: 411 EM 412
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 165/303 (54%), Gaps = 7/303 (2%)
Query: 56 KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
+D+V+W+ALIS Y+ N++ AI F ML G PN++ + V +A + + G+
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRAC-SNKENISLGKI 63
Query: 116 VHAFCLKYGY-DWNVYVGSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNALIAGHARK 173
+ F LK GY + +V VG +L+DM+ + + ++ A+ +F + +N V+W +I +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
A+ F +M+ G+ P F+ S V +A A G L G+ H V+KSG L VG
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 234 NTLVDMYAK---SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH-GLGKATVRWFEKMLR 289
+LVDMYAK GS++DA KVF+R+ +V+SW +++TG Q G + + F +M++
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+ PN TF VL AC++ + G+ +AL+ K + + + + R G ++
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 350 ALK 352
A K
Sbjct: 304 ARK 306
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 158 KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV 217
++ VSW+ALI+ +A + +A+ F +ML GF P + ++ VF A ++ ++ GK +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 218 HAHVIKSGG-QLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
++K+G + VG L+DM+ K +G +E A KVF+R+ R+VV+W M+T Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ V F M+ +G P++ T V++AC+ GLL G+ + L+ K G++ +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 336 TFVDLLGRA---GLLDRALKFIREMPIEPTAAVWGALL 370
+ VD+ + G +D A K MP+ + W A++
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMS-WTAII 221
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
KRD+VSW+++++ A + + F ML G PN+ F V ACS+ + G+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 318 YFALMKKHG-VEPEEAHYVTFVDLLGRA-GLLDRALKFIREMPIEPTAAVWGALL 370
F + K G E + +D+ + G L+ A K MP + W ++
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTWTLMI 117
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/557 (43%), Positives = 358/557 (64%), Gaps = 5/557 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH ++ S + I + N+++N Y+K + +A+ +FD M ++ V+W ++I+G+ N
Sbjct: 215 VHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGL 274
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A LF +M G+K Q ++V+K A + F +Q+H +K G D+++ + +
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLC-ANIKEMSFAKQLHCQVIKNGSDFDLNIKT 333
Query: 134 SLLDMYARFDQMDDAWFLFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GF 191
+L+ Y++ ++DDA+ LF + +N VSW A+I+G+ + ++A+ F +M RE G
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGV 393
Query: 192 EPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP F++SSV A A+ T S+EQGK H+ IKSG V + LV MYAK G+IE A
Sbjct: 394 EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESAN 453
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+VF R + RD+VSWNSM++G AQHG GK +++ FE+M + + +TF+ V++AC+HAG
Sbjct: 454 EVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAG 513
Query: 311 LLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L++EGQ YF LM K + + P HY VDL RAG+L++A+ I +MP A +W L
Sbjct: 514 LVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTL 573
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L ACR+H NV+LG AAE++ L P DS ++LL+NIYA+AG + A+ RK+M VK
Sbjct: 574 LAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVK 633
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KE SW+E KN F+A D +HPQ I+ K E+S ++K GY PD+ +VL +++
Sbjct: 634 KEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEE 693
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
+E L HSE+LA+AF LI+TPPG+ I I KN+RVCGDCH+ K SK+ R+I+VRD+
Sbjct: 694 HKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDS 753
Query: 550 NRFHHFRDGFCSCGDYW 566
NRFHHF+ G CSCGDYW
Sbjct: 754 NRFHHFKGGSCSCGDYW 770
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 187/367 (50%), Gaps = 43/367 (11%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
+++LFDE P + + L+ +S+NDQ + A+ LF + R G + +LS VLK G
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
D G+QVH C+K G+ +V VG+SL+DMY + + ++D +F + KN VSW +
Sbjct: 105 -LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
L+AG+ + E+AL+ FS+M EG +P F++++V LA+ G++E+G VH VIKSG
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
FVGN++V+MY+KS + DA+ VF+ + R+ VSWNSM+ G +GL F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 286 KMLRNGIAPNQVTFLCVLTACS-----------HAGLLDEGQGY---------------- 318
+M G+ Q F V+ C+ H ++ G +
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 319 --------FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI----REMPIEPTAAVW 366
F +M HGV+ + + + G DRA+ RE +EP +
Sbjct: 344 EIDDAFKLFCMM--HGVQ-NVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTF 400
Query: 367 GALLGAC 373
++L AC
Sbjct: 401 SSVLNAC 407
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 195/366 (53%), Gaps = 5/366 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + F D+++ ++++ Y K +++ ++FDEM VK++V+WT+L++GY QN
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ LFSQM G+KPN FT ++VL A +K G QVH +K G D ++VG+
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEK-GVQVHTMVIKSGLDSTIFVGN 232
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
S+++MY++ + DA +F ++E++N VSWN++IAG +A F M EG +
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T +++V A+ + K +H VIK+G + L+ Y+K I+DA K+F
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 254 NRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSH-AG 310
+ ++VVSW ++++G Q+G + F +M R G+ PN+ TF VL AC+
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+++G+ + + K G V + + G ++ A + + ++ W +++
Sbjct: 413 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMI 471
Query: 371 GACRMH 376
H
Sbjct: 472 SGYAQH 477
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 160/278 (57%), Gaps = 6/278 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C ++K++ A+ +H ++ + D+ ++ ++ AY+KC +D+A KLF M V+++V+
Sbjct: 304 CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS 363
Query: 61 WTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
WTA+ISGY QN + + A+ LF QM R G++PN+FT SSVL A A + G+Q H+
Sbjct: 364 WTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC 423
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G+ + V S+L+ MYA+ ++ A +F ++ VSWN++I+G+A+ G+K+
Sbjct: 424 SIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKS 483
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLV 237
L+ F EM + E ++ V +A G + +G+ ++K +V + + +V
Sbjct: 484 LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKD-YHIVPTMEHYSCMV 542
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
D+Y+++G +E A + N++ W ++L C H
Sbjct: 543 DLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/558 (43%), Positives = 365/558 (65%), Gaps = 2/558 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E HA I+ + D N ++N Y+KCG ++ ARKLFDEMPV+ +V+W ++ ++
Sbjct: 38 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
QN E A++LF QM + G ++FT+SSV+ A A + +Q+H F LK D NV
Sbjct: 98 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFE-CKQLHGFALKTALDSNV 156
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VG++LLD+YA+ + DA +F + +++V+W++++AG+ + E+AL F
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 216
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G E F+ SS +A A+ +L +GK V A K+G FV ++L+DMYAK G IE+A
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF+ + +++VV WN++L+G ++H + +FEKM + GI PN +T++ VL+ACSH
Sbjct: 277 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 336
Query: 310 GLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+++G+ YF LM + H V P HY VD+LGRAGLL A FI MP + TA++WG+
Sbjct: 337 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 396
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL +CR+++N+EL AA+ +FE++PH++G H+LL+NIYA+ R + ARAR ++KES
Sbjct: 397 LLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKA 456
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KKE SW+E K+ VH F+ + HP+ I+ K ++ ++K+IGY + H L ++
Sbjct: 457 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEE 516
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
++ L+ HSEKLAL F ++ P G+ I I KN+R+CGDCHS K AS + EREIIVRD
Sbjct: 517 SRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRD 576
Query: 549 TNRFHHFRDGFCSCGDYW 566
TNRFHHF++G+CSCG++W
Sbjct: 577 TNRFHHFKNGYCSCGEFW 594
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/636 (40%), Positives = 373/636 (58%), Gaps = 76/636 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
C + L + VH+ ++ + + N++LN YAKCG
Sbjct: 155 CAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTW 214
Query: 42 ----------C-LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR-LGL 89
C D A LFD+M D+V+W ++I+GY A+ FS ML+ L
Sbjct: 215 NTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSL 274
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------- 141
KP++FTL SVL A A K G+Q+HA ++ D VG++L+ MYA+
Sbjct: 275 KPDKFTLGSVLSAC-ANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAH 333
Query: 142 ---------------FDQMDDAWF----------LFTALESKNEVSWNALIAGHARKSEG 176
F + D +F +F +L+ ++ V+W A+I G+A+
Sbjct: 334 RIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLI 393
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F M+REG +P +++ ++V + ++S SL+ GK +HA I+ VGN L
Sbjct: 394 SDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNAL 453
Query: 237 VDMYAKSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+ MY++SGSI+DA K+FN + RD ++W SM+ AQHGLG + FEKMLR + P+
Sbjct: 454 ITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPD 513
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+T++ VL+AC+H GL+++G+ YF LMK H +EP +HY +DLLGRAGLL+ A FI
Sbjct: 514 HITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFI 573
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R MPIEP WG+LL +CR+HK V+L AAE++ +DP++SG ++ LAN ++ G+
Sbjct: 574 RNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWE 633
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR----AMIHKKWREISEKI 470
DAA+ RK MK+ VKKE SWV+ KN VH+F D HPQR MI K W+E I
Sbjct: 634 DAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKE----I 689
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
K++G++PD++ VL +Q+ +E L+ HSEKLA+AFALI+TP +T+ I KN+RVC DCH
Sbjct: 690 KKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCH 749
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SA ++ S +VEREIIVRD RFHHF+DG CSC DYW
Sbjct: 750 SAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 206/430 (47%), Gaps = 78/430 (18%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NTIL+A+AK G LD AR++FDE+P D V+WT +I GY+ ++A+ F +M+ G+
Sbjct: 83 NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P QFT ++VL AS A A G++VH+F +K G V V +SLL+MYA+
Sbjct: 143 PTQFTFTNVL-ASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKV 201
Query: 142 ----------------------FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
F Q D A LF + + VSWN++I G+ + +A
Sbjct: 202 VFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRA 261
Query: 180 LRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L TFS ML+ +P F+ SV +A A+ SL+ GK +HAH++++ + VGN L+
Sbjct: 262 LETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALIS 321
Query: 239 MYAKSGSIEDAEK---------------------------------VFNRLLKRDVVSWN 265
MYAKSG++E A + +F+ L RDVV+W
Sbjct: 322 MYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWT 381
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G AQ+GL + F M+R G PN T VL+ S LD G+ A+
Sbjct: 382 AMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAV---- 437
Query: 326 GVEPEEAHYVT----FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+ EE V+ + + R+G + A K + W +++ + H L
Sbjct: 438 AIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG---L 494
Query: 382 GAYAAERIFE 391
G A E +FE
Sbjct: 495 GNEAIE-LFE 503
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 64/319 (20%)
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESK 158
L S + D GR +HA +K+G + V++ ++LL++Y + DA LF + K
Sbjct: 18 LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSE-------------------------------ML 187
SWN +++ HA+ + A R F E M+
Sbjct: 78 TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G PT F++++V + A+ +L+ GK VH+ V+K G V V N+L++MYAK G
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSV 197
Query: 248 DAEKVFNRLLKR-------------------------------DVVSWNSMLTGCAQHGL 276
A+ VF+R+ + D+VSWNS++TG G
Sbjct: 198 MAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGY 257
Query: 277 GKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ F ML+ + + P++ T VL+AC++ L G+ A + + V+ A
Sbjct: 258 DIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN 317
Query: 336 TFVDLLGRAGLLDRALKFI 354
+ + ++G ++ A + +
Sbjct: 318 ALISMYAKSGAVEVAHRIV 336
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/610 (39%), Positives = 360/610 (59%), Gaps = 46/610 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK + + V+ ++L F+ + ++ +IL+ + KCG +D AR+ F+E+ KD+ W
Sbjct: 121 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++SGY+ + + A+ +F +M+ G+KPN T++S + A + + GR++H +C+
Sbjct: 181 NIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSAC-TNLSLLRHGREIHGYCI 239
Query: 122 KYG-YDWNVYVGSSLLDMYAR--------------------------------------- 141
K D ++ VG+SL+D YA+
Sbjct: 240 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKA 299
Query: 142 ----FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
F +M A +F+ L +++ V WN++I+ A+ AL EM E +
Sbjct: 300 ALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT 359
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
S A + +L QGK +H +I+ G F+ N+L+DMY + GSI+ + ++F+ +
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+RD+VSWN M++ HG G V F++ G+ PN +TF +L+ACSH+GL++EG
Sbjct: 420 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK 479
Query: 318 YFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
YF +MK ++ ++P Y VDLL RAG + L+FI +MP EP AAVWG+LLGACR+H
Sbjct: 480 YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIH 539
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
N +L YAA +FEL+P SG ++L+ANIY++AGR DAA+ R +MKE GV K P CSW
Sbjct: 540 CNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSW 599
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
+E K +H FV D +HP I K + IK+IGYVPD++ VL D+ E+E L
Sbjct: 600 IEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLC 659
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFR 556
HSEK+ALAF LIST G+ + I KN+RVCGDCHSA KF SKV +R+II+RD RFHHF
Sbjct: 660 GHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFV 719
Query: 557 DGFCSCGDYW 566
DG CSCGDYW
Sbjct: 720 DGVCSCGDYW 729
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 225/474 (47%), Gaps = 57/474 (12%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KC L L+ VHA ++ + + + +L Y + GC+++AR++FD+M +++ +
Sbjct: 19 KCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFS 78
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA++ Y E I LF M+ G++P+ F V KA + + + G+ V+ +
Sbjct: 79 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKAC-SELKNYRVGKDVYDYM 137
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L G++ N V S+LDM+ + +MD A F +E K+ WN +++G+ K E +KAL
Sbjct: 138 LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 197
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--FVGNTLVD 238
F +M+ EG +P + +S +A + L G+ +H + IK +L + VGN+LVD
Sbjct: 198 NVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV-EELDSDLLVGNSLVD 256
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSML--TGCAQHGLGKATVRWFEKM--------- 287
YAK S+E A + F + + D+VSWN+ML TG Q+G GKA + +F++M
Sbjct: 257 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSE 316
Query: 288 ----------------------------LR----NGIAPNQVTFLCVLTACSHAGLLDEG 315
LR + + N VT + L ACS L +G
Sbjct: 317 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 376
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+ + + G++ + +D+ GR G + ++ + MP + W ++ M
Sbjct: 377 KEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYGM 435
Query: 376 H--KNVELGAYAAERIFELDPHDSGPHILLANIYAS---AGRLNDAARARKMMK 424
H + + R L P+ HI N+ ++ +G + + + KMMK
Sbjct: 436 HGFGMDAVNLFQQFRTMGLKPN----HITFTNLLSACSHSGLIEEGWKYFKMMK 485
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+S+ +L G VHA ++ +G + F+G+ L+++Y ++G +EDA ++F+++
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R+V SW +++ G + T++ F M+ G+ P+ F V ACS G+
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ M G E + +D+ + G +D A +F E+
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 172
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/556 (43%), Positives = 352/556 (63%), Gaps = 4/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHA + + +D+ + + + Y+K G +EARK+FDEMP +++ TW A +S +
Sbjct: 130 VHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGR 189
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++A+ F + G +PN T + L A AGA+ + GRQ+H F L+ G++ +V V +
Sbjct: 190 YDDALTAFIEFRHEGWEPNLITFCAFLNAC-AGASYLRLGRQLHGFVLQSGFEADVSVAN 248
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D Y + Q+ + +F+ + N+VSW ++I + + E EKA F +EG EP
Sbjct: 249 GLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEP 308
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T F SSV +A A LE GK VH +K+ FVG+ LVDMY K GSIEDAE+ F
Sbjct: 309 TDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAF 368
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML--RNGIAPNQVTFLCVLTACSHAGL 311
+ + +R++V+WN+M+ G A G V F++M + +APN VTF+CVL+ACS AG
Sbjct: 369 DEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGS 428
Query: 312 LDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ G F M+ ++G+EP HY VDLLGRAG++++A +FI++MPI PT +VWGALL
Sbjct: 429 VNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 488
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GA +M ELG AA+ +FELDP DSG H+LL+N++A+AGR +A RK MK+ G+KK
Sbjct: 489 GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKK 548
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
CSW+ NAVH+F A D +H + + I ++ +++ GY+PD+S L +++E
Sbjct: 549 GAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEE 608
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ ++ HSEK+ALAF LIS P G I I KN+R+CGDCHSA KF S +V REIIVRD N
Sbjct: 609 KAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNN 668
Query: 551 RFHHFRDGFCSCGDYW 566
FH FRD CSC DYW
Sbjct: 669 LFHRFRDNQCSCRDYW 684
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 182/374 (48%), Gaps = 10/374 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIA--MQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
+C+ L R HA I+ + N + + N ++N Y+K + A+ L P + +
Sbjct: 20 QCSRL-----GRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSV 73
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
VTWTALI+G QN + +A+ FS M R ++PN FT KASG+ G+QVHA
Sbjct: 74 VTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS-LRSPLVGKQVHA 132
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G +V+VG S DMY++ ++A +F + +N +WNA ++ + +
Sbjct: 133 LAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDD 192
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F E EG+EP ++ + A A L G+ +H V++SG + V N L+D
Sbjct: 193 ALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLID 252
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
Y K + +E +F+ + K + VSW SM+ Q+ + F + + GI P
Sbjct: 253 FYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFM 312
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL+AC+ +L+ G+ L K V VD+ G+ G ++ A + EMP
Sbjct: 313 VSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 372
Query: 359 IEPTAAVWGALLGA 372
E W A++G
Sbjct: 373 -ERNLVTWNAMIGG 385
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 149/288 (51%), Gaps = 16/288 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R +H +L S F+ D+++ N +++ Y KC + + +F + + V+W
Sbjct: 219 CAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSW 278
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y QND+ E A ++F + + G++P F +SSVL A AG + + G+ VH +
Sbjct: 279 CSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSAC-AGLSVLEVGKSVHTLAV 337
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K N++VGS+L+DMY + ++DA F + +N V+WNA+I G+A + + + A+
Sbjct: 338 KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVT 397
Query: 182 TFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVGN 234
F EM P + ++ V +A + GS+ G + + I+ G + A V
Sbjct: 398 LFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV-- 455
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG---LGK 278
VD+ ++G +E A + ++ R VS W ++L G LGK
Sbjct: 456 --VDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGK 501
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 4/256 (1%)
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK-YGYDWNVYVGSSLLDMYARFDQMDD 147
L PN +L+S+++ S + GR HA +K ++ + L++MY++ D+ +
Sbjct: 4 LSPN--SLASLVE-SAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNS 60
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A L + +++ V+W ALIAG + AL FS M R+ +P F++ F A S
Sbjct: 61 AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
S GK VHA +K+G FVG + DMY+K+G E+A K+F+ + +R++ +WN+
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
L+ G + F + G PN +TF L AC+ A L G+ + + G
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF 240
Query: 328 EPEEAHYVTFVDLLGR 343
E + + +D G+
Sbjct: 241 EADVSVANGLIDFYGK 256
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + VH + + +I + + +++ Y KCG +++A + FDEMP +++VTW
Sbjct: 320 CAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTW 379
Query: 62 TALISGYSQNDQPENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
A+I GY+ Q + A+ LF +M + PN T VL A + + +
Sbjct: 380 NAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESM 439
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEK 178
+YG + + ++D+ R ++ A+ + + VS W AL+ A K G+
Sbjct: 440 RGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG--ASKMFGKS 497
Query: 179 AL-RTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
L + ++ L E +P H S++F A G+W A +++
Sbjct: 498 ELGKVAADNLFE-LDPLDSGNHVLLSNMFAA--------AGRWEEATLVR 538
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/563 (42%), Positives = 350/563 (62%), Gaps = 3/563 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ ++ + +H + + + F + + + +++ YAKCG L AR LFD M +++V+W ++
Sbjct: 249 LRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSM 308
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I Y QN+ P+ A+++F +ML G+KP ++ L A A D + GR +H ++
Sbjct: 309 IDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHAC-ADLGDLERGRFIHKLSVELE 367
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D NV V +SL+ MY + ++D A +F L+S+ VSWNA+I G A+ +AL FS
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFS 427
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M +P F+Y SV TA+A KW+H V+++ FV LVDMYAK G
Sbjct: 428 QMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCG 487
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+I A +F+ + +R V +WN+M+ G HG+GKA + FE+M + I PN VTFL V++
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVIS 547
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+GL++ G F +MK+ + +EP HY VDLLGRAG L+ A FI +MP++P
Sbjct: 548 ACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
V+GA+LGAC++HKNV AER+FEL+P D G H+LLANIY +A + R M
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
G++K P CS VE KN VH F + AHP I+ ++ +IK+ GYVPD++ +L
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL 727
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
D +E L HSEKLA++F L++T G+TIH++KN+RVC DCH+A K+ S V RE
Sbjct: 728 GLEDDV-KEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 786
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
IIVRD RFHHF++G CSCGDYW
Sbjct: 787 IIVRDMQRFHHFKNGACSCGDYW 809
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 186/345 (53%), Gaps = 16/345 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDI----AMQNTILNAYAKCGCLDEARKLFDEMPVK 56
+C+ LK+L+ HIL FKN + Q +++ + + G +DEA ++F+ + K
Sbjct: 46 RCSSLKELR-------HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKK 98
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
V + ++ G+++ + A+ F +M ++P + + +LK G A + + G+++
Sbjct: 99 LNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEA-ELRVGKEI 157
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H +K G+ +++ + L +MYA+ Q+ +A +F + ++ VSWN ++AG+++
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL + M E +P+ + SV A+++ + GK +H + +++G + + L
Sbjct: 218 RMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATAL 277
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDMYAK GS++ A +F+ +L+R+VVSWNSM+ Q+ K + F+KML G+ P
Sbjct: 278 VDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTD 337
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL 341
V+ + L AC+ G L+ G+ + K VE E V+ V+ L
Sbjct: 338 VSVMGALHACADLGDLERGR----FIHKLSVELELDRNVSVVNSL 378
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 143/276 (51%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R +H + ++++ N++++ Y KC +D A +F ++ + +V+W
Sbjct: 347 CADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSW 406
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G++QN +P A+ FSQM +KP+ FT SV+ A A + + +H +
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAI-AELSITHHAKWIHGVVM 465
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D NV+V ++L+DMYA+ + A +F + ++ +WNA+I G+ G+ AL
Sbjct: 466 RNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALE 525
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F EM + P ++ SV +A + +G +E G H++K + + + +VD+
Sbjct: 526 LFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCF-HMMKENYSIEPSMDHYGAMVDL 584
Query: 240 YAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
++G + +A + + +K V + +ML C H
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 149/315 (47%), Gaps = 7/315 (2%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
R + K G + L+ ++ R+ +D+A +F ++ K V + ++ G A+
Sbjct: 54 RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKV 113
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
S+ +KAL+ F M + EP ++++ + L GK +H ++KSG L F
Sbjct: 114 SDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
L +MYAK + +A KVF+R+ +RD+VSWN+++ G +Q+G+ + + M +
Sbjct: 174 TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLK 233
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ +T + VL A S L+ G+ + G + VD+ + G L A +
Sbjct: 234 PSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTA-RL 292
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAG 411
+ + +E W +++ A ++N + +++ + + P D ++ ++A A
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS---VMGALHACAD 349
Query: 412 RLNDAARARKMMKES 426
L D R R + K S
Sbjct: 350 -LGDLERGRFIHKLS 363
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
L SL++ + + + K+G LV ++ + GS+++A +VF + K+ V +
Sbjct: 44 LERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLY 103
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ML G A+ +++F +M + + P F +L C L G+ L+ K
Sbjct: 104 YTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G + ++ + + A K MP E W ++
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP-ERDLVSWNTIVAG 210
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/598 (40%), Positives = 362/598 (60%), Gaps = 34/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA--------------- 46
C L L +H +I+ D+ N ++N Y+K L+E+
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175
Query: 47 -----------------RKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
RK+F+ MP KD+V+W +I+G ++N E + + +M L
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL 235
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
KP+ FTLSSVL A D G+++H ++ G D ++YV SSL+DMYA+ ++ D+
Sbjct: 236 KPDSFTLSSVLPLI-AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+FT L ++ +SWN++IAG + ++ LR F +ML +P +S+SS+ A A
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L GK +H ++ ++G F+ ++LVDMYAK G+I A+++F+R+ RD+VSW +M+
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
GCA HG + FE+M GI PN V F+ VLTACSH GL+DE YF ++ + G+
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIA 474
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P HY DLLGRAG L+ A FI M I PT ++W LL ACR+H N+++ A R
Sbjct: 475 PGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANR 534
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I E+DP+++G +ILLANIY++A R +AA+ R M+ G++K PACSW+E KN V+ F+A
Sbjct: 535 ILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMA 594
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D++HP I + + E +++ GYVPD+S V ++++++ + HSE+LA+ F +
Sbjct: 595 GDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGI 654
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I+TP G TI + KN+RVC DCH+A KF SK+V REI+VRD +RFHHF++G CSCGDYW
Sbjct: 655 INTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 211/492 (42%), Gaps = 79/492 (16%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+ L ++ +LF+ + + W ++I Y+ + P ++ F ML GL P+
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------------- 141
SVLK S A D G +H + ++ G D+++Y G++L++MY++
Sbjct: 110 PSVLK-SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 142 --FDQM---------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
FD+M D +F + K+ VSWN +IAG+AR E+ LR
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM +P F+ SSV +A + +GK +H I+ G +V ++L+DMYAK
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ D+ +VF L +RD +SWNS++ GC Q+GL +R+F +ML I P +F ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+H L G+ + ++G + + VD+ + G + A + M + +
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
W A++ C +H G+ DA + M+
Sbjct: 409 -WTAMIMGCALH----------------------------------GQAPDAIELFEQME 433
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
G+K F+A A ++ + W+ + + G P H +
Sbjct: 434 TEGIKPNHVA-----------FMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAA 482
Query: 485 YADQQEREAKLQ 496
+D R +L+
Sbjct: 483 VSDLLGRAGRLE 494
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 362/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ +H+ + + F++D+ + +++ Y+K CLD+ARK+ + + +D+V+W
Sbjct: 356 CTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSW 415
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q+D E A+ F +M G+ P+ L+S A AG + G Q+HA
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC-AGIKAMRQGLQIHARVY 474
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY ++ + ++L+++YAR + ++A+ LF ++ K+E++WN LI+G + E+AL
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALM 534
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + G + F++ S +ALA+ ++QGK VH +K+G V N L+ +Y
Sbjct: 535 VFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYG 594
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA+ +F+ + R+ VSWN+++T C+QHG G + F++M + G+ PN VTF+
Sbjct: 595 KCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIG 654
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL++EG YF M +G+ P HY VD+LGRAG LDRA +F+ EMPI
Sbjct: 655 VLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPIT 714
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A +W LL AC++HKN+E+G AA+ + EL+PHDS ++LL+N YA G+ + + R
Sbjct: 715 ANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVR 774
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMMK+ G++KEP SW+E KNAVH F D HP I+K E+++++ +IGY ++
Sbjct: 775 KMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENP 834
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
++ +Q++++ VHSEKLA+AF L++ PP + + KN+RVC DCHS KF S+V
Sbjct: 835 NLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVT 894
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD RFHHF G CSCGDYW
Sbjct: 895 RREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 189/367 (51%), Gaps = 2/367 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + D + N +++ YAK G + +AR++F E+ +D V+W A++SGY+Q
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ A L+SQM + P + LSSVL A G + GR +HA K + +VG+
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQ-GRMIHAQVYKQAFCSETFVGN 183
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ +Y F A +F + + V++N LI+GHA+ GE AL+ F EM G P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ A AS G L++GK +H++++K+G +L+D+Y K G IE A +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +VV WN ML Q + F +M GI PN+ T+ C+L C+ G ++
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L K+G E + +D+ + LD+A K I EM + W +++
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARK-ILEMLEKRDVVSWTSMIAGY 422
Query: 374 RMHKNVE 380
H E
Sbjct: 423 VQHDFCE 429
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 183/356 (51%), Gaps = 1/356 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT K + R++HA + AF ++ + N ++ Y G A ++F +M D VT+
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISG++Q E A+ +F +M GL+P+ T++S+L A+ A D + G+Q+H++ L
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL-AACASVGDLQKGKQLHSYLL 272
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ SLLD+Y + ++ A +F + N V WN ++ + + S+ K+
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G P F+Y + TG +E G+ +H+ IK+G + +V L+DMY+
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K ++ A K+ L KRDVVSW SM+ G QH + + F++M G+ P+ +
Sbjct: 393 KYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+AC+ + +G A + G + + + T V+L R G + A RE+
Sbjct: 453 AASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 41/352 (11%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
++HA + G + +G+ L+D+YA+ + A +F L S++ VSW A+++G+A++
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
G++A R +S+M PT + SSV +A QG+ +HA V K FVGN
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+ +Y GS + AE+VF +L D V++N++++G AQ G G+ ++ F++M +G+ P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG--------- 345
+ VT +L AC+ G L +G+ + + K G+ + + +DL + G
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 346 --------------------LLDRALKF-----IREMPIEPTAAVWGALLGACRMHKNVE 380
+ D A F ++ I P + +L C +E
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363
Query: 381 LG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LG + + + FE D + SG +L ++Y+ L+ A + +M+++ V
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSG---VLIDMYSKYRCLDKARKILEMLEKRDV 412
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/554 (41%), Positives = 361/554 (65%), Gaps = 4/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH I+ S F +++ +Q+ +++ YAKCG L A+ + + M D+V+W +L+ G+ ++
Sbjct: 287 VHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGL 346
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ LF M +K + +T SVL G+ + K VH +K G++ V +
Sbjct: 347 EEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPK---SVHGLIIKTGFENYKLVSN 403
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMYA+ MD A+ +F + K+ +SW +L+ G+A+ + E++L+ F +M G P
Sbjct: 404 ALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNP 463
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F +S+ +A A LE GK VH IKSG + V N+LV MYAK G ++DA+ +F
Sbjct: 464 DQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIF 523
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +DV++W +++ G AQ+G G+ ++++++ M+ +G P+ +TF+ +L ACSHAGL+D
Sbjct: 524 VSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVD 583
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ YF M K +G++P HY +DL GR+G LD A + + +M ++P A VW +LL A
Sbjct: 584 EGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H+N+EL AA +FEL+P ++ P+++L+N+Y+++ + ND A+ RK+MK G+ KEP
Sbjct: 644 CRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEP 703
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CSW+E + V+ F+++D HP+ A I+ K EI +IK+ GYVPD S L D++ +E
Sbjct: 704 GCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKE 763
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+AF L++ PP + I I KN+RVCGDCHSA K+ S+V R II+RD+N F
Sbjct: 764 VGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCF 823
Query: 553 HHFRDGFCSCGDYW 566
HHFR+G CSCGDYW
Sbjct: 824 HHFREGECSCGDYW 837
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 201/371 (54%), Gaps = 6/371 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMV 59
C+ L ++ ++H ++ + F+ ++ + +++ YAKC C+ EA LF E K+ V
Sbjct: 172 CSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHV 231
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
WTA+++GY+QN A+ F M G++ NQ+T ++L A + FG QVH F
Sbjct: 232 LWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTAC-SSVLARCFGEQVHGF 290
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G+ NVYV S+L+DMYA+ + +A + +E + VSWN+L+ G R E+A
Sbjct: 291 IVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEA 350
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR F M + +++ SV GS+ K VH +IK+G + V N LVDM
Sbjct: 351 LRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSINP-KSVHGLIIKTGFENYKLVSNALVDM 408
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK+G ++ A VF ++L++DV+SW S++TG AQ+ + +++ F M G+ P+Q
Sbjct: 409 YAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIV 468
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L+AC+ LL+ G+ K G+ ++ Y + V + + G LD A M +
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV 528
Query: 360 EPTAAVWGALL 370
+ W A++
Sbjct: 529 KDVIT-WTAII 538
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 207/434 (47%), Gaps = 45/434 (10%)
Query: 17 HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS---------- 66
H +A I N +LN +K G +++ARKLFD+MP KD +W +IS
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 67 ---------------------GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SG 104
GY + A LF M G K +QFTL SVL+ S
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 105 AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE--SKNEVS 162
G + G +H F +K G++ NV+V + L+DMYA+ + +A FLF LE KN V
Sbjct: 175 LGLI--QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVL 232
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
W A++ G+A+ +G KA+ F M +G E +++ ++ TA +S + G+ VH ++
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
KSG +V + LVDMYAK G +++A+ + + DVVSWNS++ G +HGL + +R
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
F+ M + + TF VL C + + L+ K G E + VD+
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPH 400
+ G +D A +M +E W +L+ + + E L + R+ ++P
Sbjct: 411 KTGDMDCAYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNP----DQ 465
Query: 401 ILLANIYASAGRLN 414
++A+I ++ L
Sbjct: 466 FIVASILSACAELT 479
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + VH + S + ++ N+++ YAKCGCLD+A +F M VKD++TW
Sbjct: 475 CAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITW 534
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD--KFGRQVHA 118
TA+I GY+QN + N++ + M+ G +P+ T +L A S AG D+ K+ +Q++
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKS 174
YG + ++D++ R ++D+A L ++ K + + W +L++ H
Sbjct: 595 V---YGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLE 651
Query: 175 EGEKALRTFSEM 186
E+A E+
Sbjct: 652 LAERAATNLFEL 663
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 362/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT+ ++ +H + + F++D+ + +++ Y+K G LD+AR++ + + KD+V+W
Sbjct: 355 CTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSW 414
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q++ + A+ F M G+ P+ L+S + A AG + G+Q+H+
Sbjct: 415 TSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISAC-AGIKAMRQGQQIHSRVY 473
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY +V + ++L+++YAR + +A+ LF A+E K++++WN +++G A+ E+AL
Sbjct: 474 VSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALE 533
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + G + F++ S +A A+ ++QGK +HA VIK+G V N L+ +Y
Sbjct: 534 VFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYG 593
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA+ F + +R+ VSWN+++T C+QHG G + F++M + G+ PN VTF+
Sbjct: 594 KCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIG 653
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL++EG GYF M +HG+ P HY VD+LGRAG LDRA KF+ EMP+
Sbjct: 654 VLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVS 713
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VW LL ACR+HKN+E+G AA+ + EL+PHDS ++LL+N YA G+ R
Sbjct: 714 ANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVR 773
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMMK+ GV+KEP SW+E KN VH F D HP I+K ++ +++ +IGY+ +
Sbjct: 774 KMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNY 833
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ ++++++ VHSEKLA+AF L+S PP + + KN+RVC DCH+ KF S+V+
Sbjct: 834 FLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVM 893
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD RFHHF +G CSCGD+W
Sbjct: 894 GREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 211/401 (52%), Gaps = 7/401 (1%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
++HA + D N +++ YAK G + AR++F+++ +D V+W A++SGY++N
Sbjct: 63 VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E A+ L+ QM G+ P + LSSVL A A ++ GR VHA K G VG
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQ-GRLVHAQVYKQGSCSETVVG 181
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++L+ +Y RF + A +F+ + + V++N LI+ HA+ GE AL F EM G+
Sbjct: 182 NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWT 241
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P + +S+ A AS G L +GK +H++++K+G + +L+D+Y K G I +A ++
Sbjct: 242 PDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F + +VV WN ML Q + F +M+ G+ PN+ T+ C+L C++AG +
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ G+ L K G E + +D+ + G LD+A + + + + + W +++
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVS-WTSMIAG 420
Query: 373 CRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASAG 411
H+ + L + ++F + P + G L + I A AG
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWPDNIG---LASAISACAG 458
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 1/344 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT ++ R+VHA + ++ + N ++ Y + G L A ++F EMP D VT+
Sbjct: 153 CTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTF 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LIS ++Q E+A+ +F +M G P+ T++S+L A+ A D G+Q+H++ L
Sbjct: 213 NTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLL-AACASIGDLNKGKQLHSYLL 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SLLD+Y + + +A +F + + N V WN ++ + + S+ K+
Sbjct: 272 KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFD 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ G P F+Y + G + G+ +H IK+G + +V L+DMY+
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYS 391
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A ++ L +DVVSW SM+ G QH K + F+ M GI P+ +
Sbjct: 392 KYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLAS 451
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
++AC+ + +GQ + + G + + + V+L R G
Sbjct: 452 AISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCG 495
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 152/291 (52%)
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++G+ ++ PE + LF+ +R + L+ +HA + G
Sbjct: 13 LTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCG 72
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ G+ L+D+YA+ + A +F L +++ VSW A+++G+AR GE+A+ +
Sbjct: 73 LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYH 132
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M G PT + SSV +A EQG+ VHA V K G VGN L+ +Y + G
Sbjct: 133 QMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFG 192
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+ AE+VF+ + D V++N++++ AQ G G++ + FE+M +G P+ VT +L
Sbjct: 193 SLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLA 252
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
AC+ G L++G+ + + K G+ P+ + +DL + G++ AL+ +
Sbjct: 253 ACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 362/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ +H+ + + F++D+ + +++ Y+K GCLD+ARK+ + + +D+V+W
Sbjct: 356 CTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSW 415
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q+D E A+ F +M G+ P+ L+S A AG + G Q+HA
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC-AGIKAMRQGLQIHARVY 474
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY ++ + ++L+++YAR + ++A+ LF +E K+E++WN LI+G + ++AL
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALM 534
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + G + F++ S +ALA+ ++QGK VH +K+G V N L+ +Y
Sbjct: 535 VFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYG 594
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA+ +F+ + R+ VSWN+++T C+QHG G + F++M + G+ PN VTF+
Sbjct: 595 KCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIG 654
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL++EG YF M +G+ P HY VD+LGRAG LDRA +F+ EMPI
Sbjct: 655 VLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPIT 714
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A +W LL AC++HKN+E+G AA+ + EL+PHDS ++LL+N YA G+ + + R
Sbjct: 715 ANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVR 774
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMMK+ G++KEP SW+E KNAVH F D HP I+K E+++++ +IGY ++
Sbjct: 775 KMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENP 834
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
++ +Q++++ VHSEKLA+AF L++ PP + + KN+RVC DCHS K S+V
Sbjct: 835 NLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVT 894
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD RFHHF G CSCGDYW
Sbjct: 895 RREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 191/367 (52%), Gaps = 2/367 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + D + N +++ YAK G + +AR++F E+ +D V+W A++SGY+Q+
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ A L+SQM + P + LSSVL A G + GR +HA K + +VG+
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQ-GRMIHAQVYKQAFCSETFVGN 183
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ +Y F A +F + + V++N LI+GHA+ GE AL+ F EM G P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ A AS G L++GK +H++++K+G +L+D+Y K G IE A +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +VV WN ML Q + F +M GI PNQ T+ C+L C+ G ++
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L K+G E + +D+ + G LD+A K I EM + W +++
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARK-ILEMLEKRDVVSWTSMIAGY 422
Query: 374 RMHKNVE 380
H E
Sbjct: 423 VQHDFCE 429
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 192/380 (50%), Gaps = 5/380 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT K + R++HA + AF ++ + N ++ Y G A ++F +M D VT+
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISG++Q E A+ +F +M GL+P+ T++S+L A+ A D + G+Q+H++ L
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL-AACASVGDLQKGKQLHSYLL 272
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ SLLD+Y + ++ A +F + N V WN ++ + + S+ K+
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G P F+Y + TG +E G+ +H+ IK+G + +V L+DMY+
Sbjct: 333 IFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A K+ L KRDVVSW SM+ G QH + + F++M G+ P+ +
Sbjct: 393 KYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+AC+ + +G A + G + + + T V+L R G + A RE+
Sbjct: 453 AASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE-HK 511
Query: 362 TAAVWGALL---GACRMHKN 378
W L+ G R++K
Sbjct: 512 DEITWNGLISGFGQSRLYKQ 531
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 171/352 (48%), Gaps = 41/352 (11%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
++HA + G + +G+ L+D+YA+ + A +F L S++ VSW A+++G+A+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
G++A R +S+M PT + SSV +A QG+ +HA V K FVGN
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+ +Y GS + AE+VF +L D V++N++++G AQ G G+ ++ F++M +G+ P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG--------- 345
+ VT +L AC+ G L +G+ + + K G+ + + +DL + G
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 346 --------------------LLDRALKF-----IREMPIEPTAAVWGALLGACRMHKNVE 380
+ D A F ++ I P + +L C +E
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363
Query: 381 LG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LG + + + FE D + SG +L ++Y+ G L+ A + +M+++ V
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSG---VLIDMYSKYGCLDKARKILEMLEKRDV 412
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/567 (41%), Positives = 356/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMV 59
C+ L L+ R VHA + F D+ +QN ++ YAKC L AR +F+ +P+ + +V
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WTA++S Y+QN +P A+ +FS M ++ +KP+ L SVL A D K GR +HA
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTC-LQDLKQGRSIHAS 247
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G + + SL MYA+ Q+ A LF ++S N + WNA+I+G+A+ +A
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM+ + P S +S +A A GSLEQ + ++ +V +S + F+ + L+DM
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
+AK GS+E A VF+R L RDVV W++M+ G HG + + + M R G+ PN VTF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L +L AC+H+G++ EG +F LM H + P++ HY +DLLGRAG LD+A + I+ MP+
Sbjct: 428 LGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P VWGALL AC+ H++VELG YAA+++F +DP ++G ++ L+N+YA+A + A
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R MKE G+ K+ CSWVE + + F D +HP+ I ++ I ++K+ G+V +
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
L + +E E L HSE++A+A+ LISTP G+ + I KN+R C +CH+A K SK+
Sbjct: 608 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 667
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REI+VRDTNRFHHF+DG CSCGDYW
Sbjct: 668 VDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 202/376 (53%), Gaps = 7/376 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
TH +LK+ +HA +L + + +++A + G + AR++FD++P + W
Sbjct: 32 THKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWN 88
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I GYS+N+ ++A++++S M + P+ FT +LKA +G + + GR VHA +
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC-SGLSHLQMGRFVHAQVFR 147
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA--LESKNEVSWNALIAGHARKSEGEKAL 180
G+D +V+V + L+ +YA+ ++ A +F L + VSW A+++ +A+ E +AL
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
FS M + +P + SV A L+QG+ +HA V+K G ++ + +L MY
Sbjct: 208 EIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + A+ +F+++ +++ WN+M++G A++G + + F +M+ + P+ ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++AC+ G L++ + + + + + +D+ + G ++ A + + + ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLD 386
Query: 361 PTAAVWGALLGACRMH 376
VW A++ +H
Sbjct: 387 RDVVVWSAMIVGYGLH 402
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 13/320 (4%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+Q+HA L G ++ ++ + L+ + F + A +F L WNA+I G++R
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ + AL +S M P F++ + A + L+ G++VHA V + G FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 234 NTLVDMYAKSGSIEDAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
N L+ +YAK + A VF L +R +VSW ++++ AQ+G + F M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P+ V + VL A + L +G+ A + K G+E E ++ + + G + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI---FELDPHDSGPH-ILLANIY 407
+M P +W A++ KN YA E I E+ D P I + +
Sbjct: 278 ILFDKMK-SPNLILWNAMISG--YAKN----GYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 408 ASAGRLNDAARARKMMKESG 427
++ ++ +AR M + G
Sbjct: 331 SACAQVGSLEQARSMYEYVG 350
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/582 (42%), Positives = 366/582 (62%), Gaps = 19/582 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---------------GCLDEAR 47
T LK K A +HA + +D+ + N ++N YAK +D +
Sbjct: 121 TLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVK 180
Query: 48 KLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAG 106
K+FD MPV+D+V+W +I+G++QN A+ + +M + G LKP+ FTLSS+L A
Sbjct: 181 KVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIF-AE 239
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
D G+++H + ++ G+D +V++GSSL+DMYA+ ++++ + F L K+ +SWN++
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299
Query: 167 IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
IAG + E ++ L F ML+E +P S+SSV A A +L G+ +H +++ G
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
F+ ++LVDMYAK G+I+ A VF+R+ KRD+V+W +++ GCA HG V FE
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAG 345
ML +G+ P V F+ VLTACSHAGL+DEG YF M++ G+ P HY DLLGRAG
Sbjct: 420 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAG 479
Query: 346 LLDRALKFIREMP-IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
L+ A FI M ++PT +VW LL ACR HK+VEL +++ +D + G ++L++
Sbjct: 480 RLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMS 539
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
NIY++A R DAAR R M++ G+KK PACSW+E N VH F+A D +HP I+K
Sbjct: 540 NIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALD 599
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
+ E++++ GYV D++ VL D++ + L HSE+LA+A+ +IST G+TI + KNIR
Sbjct: 600 VLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIR 659
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
VC DCH+A KF +K+V REI VRD +RFHHF++G CSCGDYW
Sbjct: 660 VCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 219/511 (42%), Gaps = 78/511 (15%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+++I Y+ + + F+ M L + PN+ S+LKAS K +HA
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTL-LKHHKLAHSLHACT 136
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQ---------------MDDAWFLFTALESKNEVSWNA 165
++ G D ++Y+ ++L++ YA+F +D +F + ++ VSWN
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 166 LIAGHARKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
+IAG A+ +AL EM + G +P F+ SS+ A + +GK +H + +++
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
G F+G++L+DMYAK +E + + F L ++D +SWNS++ GC Q+G + +F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
+ML+ + P V+F V+ AC+H L G+ + + G + E + VD+ +
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
G + A +++ + + W A++ C MH
Sbjct: 377 GNIKMA-RYVFDRIDKRDMVAWTAIIMGCAMH---------------------------- 407
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
G DA + M E GV+ +V F+A A ++ + WR
Sbjct: 408 ------GHALDAVSLFENMLEDGVRP----CYVA-------FMAVLTACSHAGLVDEGWR 450
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST-----PPGSTIHI 519
+ + G P H + AD R +L+ A+ IS P GS I
Sbjct: 451 YFNSMERDFGIAPGLEHYAAVADLLGRAGRLEE-------AYDFISNMRGVQPTGSVWSI 503
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ H + + A KV+++ + V N
Sbjct: 504 ---LLAACRAHKSVELAEKVLDKLLSVDSEN 531
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L R +H I+ F ++ + +++++ YAKCG + AR +FD + +DMV W
Sbjct: 338 CAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAW 397
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + + +A+ LF ML G++P +VL A D+ R ++
Sbjct: 398 TAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMER 457
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS--WNALIAGHARKSEGEKA 179
+G + +++ D+ R ++++A+ + + W+ L+A E A
Sbjct: 458 DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELA 517
Query: 180 LRTFSEML 187
+ ++L
Sbjct: 518 EKVLDKLL 525
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/567 (41%), Positives = 356/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMV 59
C+ L L+ R VHA + F D+ +QN ++ YAKC L AR +F+ +P+ + +V
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 188
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WTA++S Y+QN +P A+ +FSQM ++ +KP+ L SVL A D K GR +HA
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC-LQDLKQGRSIHAS 247
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G + + SL MYA+ Q+ A LF ++S N + WNA+I+G+A+ +A
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM+ + P S +S +A A GSLEQ + ++ +V +S + F+ + L+DM
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
+AK GS+E A VF+R L RDVV W++M+ G HG + + + M R G+ PN VTF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L +L AC+H+G++ EG +F M H + P++ HY +DLLGRAG LD+A + I+ MP+
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P VWGALL AC+ H++VELG YAA+++F +DP ++G ++ L+N+YA+A + A
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R MKE G+ K+ CSWVE + + F D +HP+ I ++ I ++K+ G+V +
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
L + +E E L HSE++A+A+ LISTP G+ + I KN+R C +CH+A K SK+
Sbjct: 608 DASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKL 667
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REI+VRDTNRFHHF+DG CSCGDYW
Sbjct: 668 VDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 203/376 (53%), Gaps = 7/376 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
TH +LK+ +HA +L + + +++A + G + AR++FD++P + W
Sbjct: 32 THKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWN 88
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I GYS+N+ ++A++++S M + P+ FT +LKA +G + + GR VHA +
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC-SGLSHLQMGRFVHAQVFR 147
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA--LESKNEVSWNALIAGHARKSEGEKAL 180
G+D +V+V + L+ +YA+ ++ A +F L + VSW A+++ +A+ E +AL
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
FS+M + +P + SV A L+QG+ +HA V+K G ++ + +L MY
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + A+ +F+++ +++ WN+M++G A++G + + F +M+ + P+ ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++AC+ G L++ + + + + + +D+ + G ++ A + + + ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLD 386
Query: 361 PTAAVWGALLGACRMH 376
VW A++ +H
Sbjct: 387 RDVVVWSAMIVGYGLH 402
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 13/320 (4%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+Q+HA L G ++ ++ + L+ + F + A +F L WNA+I G++R
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ + AL +S M P F++ + A + L+ G++VHA V + G FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 234 NTLVDMYAKSGSIEDAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
N L+ +YAK + A VF L +R +VSW ++++ AQ+G + F +M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P+ V + VL A + L +G+ A + K G+E E ++ + + G + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI---FELDPHDSGPH-ILLANIY 407
+M P +W A++ KN YA E I E+ D P I + +
Sbjct: 278 ILFDKMK-SPNLILWNAMISG--YAKN----GYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 408 ASAGRLNDAARARKMMKESG 427
++ ++ +AR M + G
Sbjct: 331 SACAQVGSLEQARSMYEYVG 350
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/567 (41%), Positives = 356/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMV 59
C L L+ R VHA + F+ D+ +QN ++ YAKC L AR +F+ +P+ + +V
Sbjct: 129 CGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIV 188
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WTA++S Y+QN +P A+ +FSQM ++ +KP+ L SVL A D + GR +HA
Sbjct: 189 SWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTC-LQDLEQGRSIHAS 247
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G + + SL MYA+ Q+ A LF ++S N + WNA+I+G+A+ + A
Sbjct: 248 VMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDA 307
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM+ + P S +S +A A GSLEQ +W+ +V +S + F+ + L+DM
Sbjct: 308 IDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDM 367
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
+AK GS+E A VF+R L RDVV W++M+ G HG + + + M R+G+ PN VTF
Sbjct: 368 FAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTF 427
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L +L AC+H+G++ EG +F M H + P++ HY +DLLGRAG LD+A + I+ MP+
Sbjct: 428 LGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPV 487
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P VWGALL AC+ H++VELG YAA+++F +DP ++G ++ L+N+YA+A + A
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R MKE G+ K+ CSWVE + + F D +HP+ I ++ I ++K+ G+V +
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
L + +E E L HSE++ +A+ LISTP G+T+ I KN+R C +CH+A K SK+
Sbjct: 608 DASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKL 667
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REI+VRDTNRFHHF+DG CSCGDYW
Sbjct: 668 VGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 202/376 (53%), Gaps = 7/376 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
TH +L++ +HA +L + + +++A + G + AR++FD++P + W
Sbjct: 32 THKAQLRQ---IHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWN 88
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I GYS+N+ ++A++++S+M + P+ FT +LKA G G + + GR VHA +
Sbjct: 89 AIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACG-GLSHLQMGRFVHAQVFR 147
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA--LESKNEVSWNALIAGHARKSEGEKAL 180
G++ +V+V + L+ +YA+ ++ A +F L + VSW A+++ +A+ E +AL
Sbjct: 148 LGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEAL 207
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
FS+M + +P + SV A LEQG+ +HA V+K G + + +L MY
Sbjct: 208 EIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMY 267
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + A+ +F+++ +++ WN+M++G A++G K + F +M+ + P+ ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISIT 327
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++AC+ G L++ + + + + +D+ + G ++ A + + + ++
Sbjct: 328 SAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECA-RSVFDRTLD 386
Query: 361 PTAAVWGALLGACRMH 376
VW A++ +H
Sbjct: 387 RDVVVWSAMIVGYGLH 402
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/568 (43%), Positives = 356/568 (62%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C +LK+L AR +H+ +L F + + +AY+KCG L +A +F +++V+
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVS 371
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISG QN A++LFS+M + PN+FT S++LKAS + Q+HA
Sbjct: 372 WTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS-----ILPPQIHAQV 426
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y +VG++LL Y++F +DA +F +E K+ V+W+A+++ HA+ + E A
Sbjct: 427 IKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGAT 486
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F++M +G +P F+ SSV A A + ++QG+ HA IK V + LV M
Sbjct: 487 YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSM 546
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y++ G+I+ A+ VF R RD+VSWNSM++G AQHG + F +M +GI + VTF
Sbjct: 547 YSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTF 606
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L V+ C+H GL+ EGQ YF ++++ H + P HY VDL RAG LD + IR+MP
Sbjct: 607 LAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMP 666
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
A VW LLGACR+HKNVELG ++A+++ L+PHDS ++LL+NIYA+AG+ +
Sbjct: 667 FPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDE 726
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M VKKE CSW++ KN VH F+A D +HP I+KK + I ++KQ GY P+
Sbjct: 727 VRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPN 786
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S VL + ++EA L HSE+LALAF LI+TPPG+ + I KN+RVCGDCH K S
Sbjct: 787 TSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSM 846
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REII+RD +RFHHF G CSCGD+W
Sbjct: 847 IEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 169/310 (54%), Gaps = 14/310 (4%)
Query: 8 LKEARIVHAHILGSAF----------KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD 57
LK R V +LG + +++ ++++ Y KCG + E ++F+ MP K+
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKN 165
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
+VTWT+L++G + + LF +M G+ PN FT +SVL A + GA D G++V
Sbjct: 166 VVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALD--LGQRV 223
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA +K+G +V+V +SL++MYA+ ++DA +F +E+++ VSWN L+AG
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+AL+ F E + T +Y++V A+ L + +H+ V+K G L V L
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTAL 343
Query: 237 VDMYAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
D Y+K G + DA +F+ R+VVSW ++++GC Q+G V F +M + + PN
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 296 QVTFLCVLTA 305
+ T+ +L A
Sbjct: 404 EFTYSAMLKA 413
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 166/348 (47%), Gaps = 3/348 (0%)
Query: 46 ARKLFDEMPVKDM-VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG 104
AR DE+P +D V ++ Y++ + FS R G+ + TLS VLKA
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 105 AGATDDKFGRQVHAFCLKYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSW 163
+ D G Q+H C+K G+D V G+SL+DMY + + + +F + KN V+W
Sbjct: 111 S-VPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+L+ G A + + F M EG P F+++SV +A+AS G+L+ G+ VHA +K
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G + FV N+L++MYAK G +EDA+ VFN + RD+VSWN+++ G + ++
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F + Q T+ V+ C++ L + + + KHG D +
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
G L AL W A++ C + ++ L R+ E
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/578 (42%), Positives = 361/578 (62%), Gaps = 14/578 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L + +H + +DI + + +++ Y+KCG L++ARKLFDE+P +++V+W
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-----------LKPNQFTLSSVLKASGAGATDD 110
T++ISGY QN++ A+ LF + L + + + L V+ A A
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC-ARVCVK 214
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 170
VH +K G++ + VG++L+D YA+ ++ + +F +E + SWN+LIA +
Sbjct: 215 SVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVY 274
Query: 171 ARKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
A+ +A FS+M++ G + S+V A A +G+L+ GK +H V+K +
Sbjct: 275 AQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
VG ++VDMY K G +E A K F+RL +++V SW M+ G HG GK ++ F +M+R
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLD 348
GI PN +TF+ VL ACSHAGLL EG +F MK + VEP HY VDLLGRAG L
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLK 454
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYA 408
A I+EM ++P VWG+LLGACR+HKNVELG +A ++F+LDP + G ++LL+NIYA
Sbjct: 455 EAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYA 514
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISE 468
AGR +D R R +MK G+ K P S VE K VH+F+ D HPQ I++ E++
Sbjct: 515 DAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNV 574
Query: 469 KIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGD 528
K++++GY+P+ + VL D +E+ L+VHSEKLA+AF ++++ PGS I I KN+R+CGD
Sbjct: 575 KLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGD 634
Query: 529 CHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
CH A K SK+V REI++RD+ RFHHF+DG CSCGDYW
Sbjct: 635 CHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 165/345 (47%), Gaps = 19/345 (5%)
Query: 47 RKLFDEMPVKDMV-TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
R +F + K V +W ++I+ ++++ A+ FS M +L L PN+ T +K S +
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIK-SCS 97
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
D G+Q+H +GY +++V S+L+DMY++ ++DA LF + +N VSW +
Sbjct: 98 SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTS 157
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFS-------------YSSVFTALASTGSLE 212
+I+G+ + +A+ F E L + T + V +A A
Sbjct: 158 MISGYVQNERAREAVFLFKEFLL--VDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+ VH +K G + VGNTL+D YAK G I + KVF+ + + DV SWNS++ A
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 273 QHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
Q+GL F M++ G + N VT VL AC+H+G L G+ + K +E
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNL 335
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ VD+ + G ++ A K + W ++ MH
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMH 379
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/568 (41%), Positives = 364/568 (64%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C+ ++L + +H ++ + ++ ++ ++ Y+KC +DEA KLF ++VT
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I G+ QN+ E A+ LF QM R G++PN FT S+VL + Q+HA
Sbjct: 376 WTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQI 430
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ V ++LLD Y + + ++ +F ++ +K+ V+W+A++ G A+ + EKA+
Sbjct: 431 IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAM 490
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTG-SLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F ++++EG +P +++SSV A +S+ ++E GK +HA +KSG V + L+ M
Sbjct: 491 EVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTM 550
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G+IE AEKVF R +RD+VSWNSM+TG QHG K + F+ M G+ + VTF
Sbjct: 551 YSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTF 610
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VLTAC+HAGL++EG+ YF +M K + ++ + HY VDL RAG+ D+A+ I MP
Sbjct: 611 IGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMP 670
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ +W LL ACR+H+N+ELG AAE++ L P+D+ ++LL+NI+A AG + A
Sbjct: 671 FPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAH 730
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M E VKKE CSW+E KN + F+A D +HP +++ K E+S K+K +GY PD
Sbjct: 731 VRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPD 790
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+++V +++ +EA L HSE+LA+A+ LI+ PPG+ I I+KN+R+CGDCH+ + S
Sbjct: 791 TNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISL 850
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ ER +IVRD+NRFHHF+ G CSCG YW
Sbjct: 851 IEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 168/335 (50%), Gaps = 1/335 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A +LFDE P+KD+ + L+ +S+N+ A+ LF + GL + TLS LK G
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
D GRQVH LK G+ +V VG+SL+DMY + + +D +F + KN VSW +
Sbjct: 117 -LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
L++G+AR ++ + ++M EG P F++++V ALA +E G VHA ++K+G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ FV N L+ MY KS + DAE VF+ ++ RD V+WN M+ G A G + F
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M G+ ++ F L CS L+ + + K+G E + + +
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
+D A K W A++G + N E
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNE 390
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 160/294 (54%), Gaps = 2/294 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R VH L S F D+++ ++++ Y K ++ R +FDEM +K++V+WT+L+SGY++
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N + I L +QM G+ PN FT ++VL A A + + G QVHA +K G+++ +
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGAL-ADESIIEGGVQVHAMIVKNGFEFTTF 241
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++L+ MY + + + DA +F ++ ++ V+WN +I G+A + + F M G
Sbjct: 242 VCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAG 301
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+ + + + + L K +H V+K+G + + L+ Y+K S+++A
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361
Query: 251 KVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
K+F+ +VV+W +M+ G Q+ + V F +M R G+ PN T+ VL
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL 415
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/560 (42%), Positives = 358/560 (63%), Gaps = 3/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L ++ +H H + + D + +++AY++ C+ EA LF D+V W A++SG
Sbjct: 440 LSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSG 498
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q+ + LF+ M + G + + FTL++VLK G ++ G+QVHA+ +K GYD
Sbjct: 499 YTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQ-GKQVHAYAIKSGYDL 557
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++V S +LDMY + M A F F ++ ++V+W LI+G E E+AL FS+M
Sbjct: 558 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMR 617
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P F+ +++ A + +LEQG+ +HA+ +K FVG +LVDMYAK GSI+
Sbjct: 618 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSID 677
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DA +F R+ ++ +WN+ML G AQHG GK ++ F++M GI P++VTF+ VL+ACS
Sbjct: 678 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACS 737
Query: 308 HAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+ E Y M + +G++PE HY D LGRAGL+ A I M +E +A+++
Sbjct: 738 HSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMY 797
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
LL ACR+ + E G A ++ EL+P DS ++LL+N+YA+A + ++ AR MMK
Sbjct: 798 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGH 857
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
VKK+P SW+E KN +H+FV +D ++PQ +I+KK +++ IKQ GYVP++ L
Sbjct: 858 KVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDV 917
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+++E+E L HSEKLA+AF L+STPP + I + KN+RVCGDCH+A K+ SKV +REI++
Sbjct: 918 EEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVL 977
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH F+DG CSCGDYW
Sbjct: 978 RDANRFHRFKDGICSCGDYW 997
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 219/432 (50%), Gaps = 6/432 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
L L + VH L + + N+++N Y K + AR +F+ M +D+++W
Sbjct: 333 VRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWN 392
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++I+G +Q+D A+ LF Q+LR GLKP+ +T++SVLKA+ + +Q+H +K
Sbjct: 393 SVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIK 452
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ +V ++L+D Y+R M +A LF + + V+WNA+++G+ + +G K L
Sbjct: 453 TNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLEL 511
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F+ M ++G F+ ++V ++ QGK VHA+ IKSG L +V + ++DMY K
Sbjct: 512 FALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 571
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G + A+ F+ + D V+W ++++GC ++G + + F +M G+ P++ T +
Sbjct: 572 CGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATL 631
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
A S L++G+ A K + + VD+ + G +D A + + +
Sbjct: 632 AKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 691
Query: 363 AAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR-A 419
A W A+L H + L + + P D I + + + +G +++A +
Sbjct: 692 TA-WNAMLVGLAQHGEGKEALQLFKQMESLGIKP-DKVTFIGVLSACSHSGLVSEAYKYI 749
Query: 420 RKMMKESGVKKE 431
R M ++ G+K E
Sbjct: 750 RSMHRDYGIKPE 761
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 181/332 (54%), Gaps = 6/332 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + + VHA+ + S + D+ + + IL+ Y KCG + A+ FD +PV D V W
Sbjct: 534 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 593
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LISG +N + E A+ +FSQM +G+ P++FT++++ KAS ++ GRQ+HA L
Sbjct: 594 TTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ-GRQIHANAL 652
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +VG+SL+DMYA+ +DDA+ LF +E N +WNA++ G A+ EG++AL+
Sbjct: 653 KLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQ 712
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M G +P ++ V +A + +G + + K++ + G + + L D
Sbjct: 713 LFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADAL 772
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVT 298
++G +++AE + + + ++ + ++L C G + R K+L + P +
Sbjct: 773 GRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE--LEPLDSSA 830
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
++ + + A DE + +MK H V+ +
Sbjct: 831 YVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 862
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 137/306 (44%), Gaps = 33/306 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + + H + D + ++N Y K G + E R LF+EMP +D+V W
Sbjct: 162 CLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLW 221
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ Y + E AI L S GL PN+ TL + + SG DD QV +F
Sbjct: 222 NLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISG----DDSEAGQVKSF-- 275
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D S++ ++ +R N +++G+ + L+
Sbjct: 276 ENGND-----ASAVSEIISR----------------------NKILSGYLHAGQYSALLK 308
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ E ++ V SL G+ VH +K G L+ V N+L++MY
Sbjct: 309 CFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K I A VFN + +RD++SWNS++ G AQ L V F ++LR G+ P+ T
Sbjct: 369 KLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTS 428
Query: 302 VLTACS 307
VL A S
Sbjct: 429 VLKAAS 434
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 150/325 (46%), Gaps = 44/325 (13%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
+ HA IL + + N +++ Y+KCG L AR++FD+MP +D+V+W ++++ Y+Q+
Sbjct: 66 KCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQS 125
Query: 72 -----DQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAFCLKY 123
+ + A +LF + + + ++ TLS +LK SG + F H + K
Sbjct: 126 SEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESF----HGYACKI 181
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G D + +V +L+++Y +F ++ + LF + ++ V WN ++ + E+A+
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 241
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
S G P + + + ++ S GQ+ +F ++
Sbjct: 242 SAFHTSGLHPNEITLR-LLSRISGDDS-------------EAGQVKSF----------EN 277
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G+ DA V +++S N +L+G G A ++ F M+ + + +QVTF+ VL
Sbjct: 278 GN--DASAV------SEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVL 329
Query: 304 TACSHAGLLDEGQGYFALMKKHGVE 328
L GQ + K G++
Sbjct: 330 ATAVRLDSLALGQQVHCMALKLGLD 354
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
+D G+ HA L + ++ ++L+ MY++ + A +F + ++ VSWN++
Sbjct: 59 TSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSI 118
Query: 167 IAGHARKSEG-----EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
+A +A+ SEG ++A F + ++ + + S + +G + + H +
Sbjct: 119 LAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYA 178
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
K G FV LV++Y K G +++ +F + RDVV WN ML + G + +
Sbjct: 179 CKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 238
Query: 282 RWFEKMLRNGIAPNQVTF 299
+G+ PN++T
Sbjct: 239 DLSSAFHTSGLHPNEITL 256
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 29/350 (8%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
ST L GK HA ++ F+ N L+ MY+K GS+ A +VF+++ +RD+VSWNS
Sbjct: 58 STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117
Query: 267 MLTGCAQHGLG-----KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
+L AQ G K F + ++ + +++T +L C H+G + + +
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGY 177
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
K G++ ++ V++ + G + EMP +W +L A +E+
Sbjct: 178 ACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDV-VLWNLMLKA-----YLEM 231
Query: 382 GAYAAERIFELDP--HDSGPH---ILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
G E +L H SG H I L + +G ++A + + E+G A S
Sbjct: 232 G--FKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSF--ENG-NDASAVSE 286
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA-KL 495
+ ++N + + + E + Q+ ++ VL+ A + + A
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFIL----VLATAVRLDSLALGQ 342
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
QVH L L L+ T S I++ +R G + F S ER++I
Sbjct: 343 QVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMS---ERDLI 389
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/566 (40%), Positives = 358/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +L+ + +H + + F+ D + N + AYAKCG L A ++F M K + +W
Sbjct: 246 CLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSW 305
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G +QN P A+ L+ QM GL P+ FT+ S+L AS A ++G++VH F L
Sbjct: 306 NALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLAS-AHLKSLRYGKEVHGFVL 364
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G + + ++G SLL +Y + A LF +E K+ VSWNA+I+G+++ E AL
Sbjct: 365 RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI 424
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +++ +GF+P+ + SV A + +L GK H + +K+ FV + +DMYA
Sbjct: 425 LFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYA 484
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG I+++ VF+ L +D+ SWN+++ HG G+ ++ FE+M + G P+ TF+
Sbjct: 485 KSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIG 544
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+LT CSHAGL++EG YF M+ HG+EP+ HY +D+LGRAG LD AL+ + EMP +
Sbjct: 545 ILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQ 604
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + VW +LL CR +E+G AE++ EL+P + ++ L+N+YA +GR +D R R
Sbjct: 605 PDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVR 664
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M+K+ G++K+ CSW+E VH FVA D+ PQ + WR++ +K+ +IGY P++S
Sbjct: 665 QMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTS 724
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++++ KL+ HSEKLA+ F L++T G+T+ I KN+R+C DCH+A KF S+V
Sbjct: 725 AVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVT 784
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD RFHHF+DG CSCGDYW
Sbjct: 785 GREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 61/509 (11%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
++H ++ D+ + N ++ Y K G +D A K+F MPV+++V+W ++ISG+S+
Sbjct: 50 GEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSE 109
Query: 71 NDQPENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
N ++ + +M+ GL P+ TL +VL A D + G ++H +K G +
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC-AREVDVQMGIRIHGLAVKLGLSED 168
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM-L 187
V V +SL+DMY++ + +A LF KN VSWN +I G K +A F EM +
Sbjct: 169 VRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQM 228
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+E E + ++ A L K +H + I+ G Q V N V YAK G +
Sbjct: 229 QEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLI 288
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
AE+VF + + V SWN+++ GCAQ+G + + + +M +G+ P+ T +L A +
Sbjct: 289 CAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASA 348
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL--------------------------- 340
H L G+ + +HG+E + ++ + L
Sbjct: 349 HLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNA 408
Query: 341 ----LGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG----AYAAERI 389
+ GL + AL R++ +P+ ++LGAC + LG YA + +
Sbjct: 409 MISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKAL 468
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
D + I ++YA +G + ++ G+K + SW NA+ +A
Sbjct: 469 LMEDVFVACSTI---DMYAKSGCIKESRSVF-----DGLKNKDLASW----NAI---IAA 513
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPD 478
H ++ E+ E+++++G +PD
Sbjct: 514 YGVHGD----GEESIELFERMRKVGQMPD 538
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 151/311 (48%), Gaps = 12/311 (3%)
Query: 70 QNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
+N+ +AI +F +++ + FT V+KA G+ D G +H +K G +
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKAC-TGSLDRGLGEVIHGMVIKMGLLLD 65
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML- 187
V+VG++L+ MY +F +D A +F + +N VSWN++I+G + + EM+
Sbjct: 66 VFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMA 125
Query: 188 -REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
EG P + +V A ++ G +H +K G V N+LVDMY+K G +
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTA 305
+A+ +F++ +++ VSWN+M+ G G F +M ++ I N+VT L +L A
Sbjct: 186 TEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPA 245
Query: 306 C---SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
C S L E GY +HG + +E FV + G+L A + M + T
Sbjct: 246 CLEISQLRSLKELHGYSI---RHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK-T 301
Query: 363 AAVWGALLGAC 373
W AL+G C
Sbjct: 302 VNSWNALIGGC 312
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/568 (40%), Positives = 364/568 (64%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C+ ++L + +H ++ + ++ ++ ++ Y+KC +DEA KLF ++VT
Sbjct: 316 CSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT 375
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I G+ QN+ + A+ LF QM R G++PN FT S+VL + Q+HA
Sbjct: 376 WTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQI 430
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ V ++LLD Y + + ++ +F ++ +K+ V+W+A++ G A+ + EKA+
Sbjct: 431 IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAM 490
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTG-SLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F ++++EG +P +++SSV A +S+ ++E GK +HA +KSG V + L+ M
Sbjct: 491 EVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTM 550
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G+IE AEKVF R +RD+VSWNSM+TG QHG K + F+ M G+ + VTF
Sbjct: 551 YSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTF 610
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VLTAC+HAGL++EG+ YF +M K + ++ + HY VDL RAG+ D+A+ I MP
Sbjct: 611 IGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMP 670
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ +W LL ACR+H+N+ELG AAE++ L P+D+ ++LL+NI+A AG + A
Sbjct: 671 FPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAH 730
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M E VKKE CSW+E KN + F+A D +HP +++ K E+S K+K +GY PD
Sbjct: 731 VRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPD 790
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+++V +++ +EA L HSE+LA+A+ LI+ PPG+ I I+KN+R+CGDCH+ + S
Sbjct: 791 TNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISL 850
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ ER +IVRD+NRFHHF+ G CSCG YW
Sbjct: 851 IEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 167/333 (50%), Gaps = 1/333 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A +LFDE P+KD+ + L+ +S+N+ A+ LF + GL + TLS LK G
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
D GRQVH LK G+ +V VG+SL+DMY + + +D +F + KN VSW +
Sbjct: 117 -LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
L++G+AR ++ + ++M EG P F++++V ALA +E G VHA ++K+G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ FV N L+ MY KS + DAE VF+ ++ RD V+WN M+ G A G + F
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M G+ ++ F L CS L+ + + K+G E + + +
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
+D A K W A++G + N
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNN 388
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 160/294 (54%), Gaps = 2/294 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R VH L S F D+++ ++++ Y K ++ R +FDEM +K++V+WT+L+SGY++
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N + I L +QM G+ PN FT ++VL A A + + G QVHA +K G+++ +
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGAL-ADESIIEGGVQVHAMIVKNGFEFTTF 241
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++L+ MY + + + DA +F ++ ++ V+WN +I G+A + + F M G
Sbjct: 242 VCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAG 301
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+ + + + + L K +H V+K+G + + L+ Y+K S+++A
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361
Query: 251 KVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
K+F+ +VV+W +M+ G Q+ K V F +M R G+ PN T+ VL
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/568 (43%), Positives = 355/568 (62%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C +LK+L AR +H+ +L F + + +AY+KCG L +A +F +++V+
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVS 371
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISG QN A++LFS+M + PN+FT S++LKAS + Q+HA
Sbjct: 372 WTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS-----ILPPQIHAQV 426
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y VG++LL Y++F +DA +F +E K+ V+W+A+++ HA+ + E A
Sbjct: 427 IKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGAT 486
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALA-STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F++M +G +P F+ SSV A A + ++QG+ HA IK V + LV M
Sbjct: 487 YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSM 546
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y++ G+I+ A+ VF R RD+VSWNSM++G AQHG + F +M +GI + VTF
Sbjct: 547 YSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTF 606
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L V+ C+H GL+ EGQ YF ++++ H + P HY VDL RAG LD + IR+MP
Sbjct: 607 LAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMP 666
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
A VW LLGACR+HKNVELG ++A+++ L+PHDS ++LL+NIYA+AG+ +
Sbjct: 667 FPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDE 726
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M VKKE CSW++ KN VH F+A D +HP I+KK + I ++KQ GY P+
Sbjct: 727 VRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPN 786
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S VL + ++EA L HSE+LALAF LI+TPPG+ + I KN+RVCGDCH K S
Sbjct: 787 TSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSM 846
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REII+RD +RFHHF G CSCGD+W
Sbjct: 847 IEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 169/310 (54%), Gaps = 14/310 (4%)
Query: 8 LKEARIVHAHILGSAF----------KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD 57
LK R V +LG + +++ ++++ Y KCG + E ++F+ MP K+
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKN 165
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
+VTWT+L++G + + LF +M G+ PN FT +SVL A + GA D G++V
Sbjct: 166 VVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALD--LGQRV 223
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA +K+G +V+V +SL++MYA+ ++DA +F +E+++ VSWN L+AG
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+AL+ F E + T +Y++V A+ L + +H+ V+K G L V L
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTAL 343
Query: 237 VDMYAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
D Y+K G + DA +F+ R+VVSW ++++GC Q+G V F +M + + PN
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 296 QVTFLCVLTA 305
+ T+ +L A
Sbjct: 404 EFTYSAMLKA 413
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 166/348 (47%), Gaps = 3/348 (0%)
Query: 46 ARKLFDEMPVKDM-VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG 104
AR DE+P +D V ++ Y++ + FS R G+ + TLS VLKA
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 105 AGATDDKFGRQVHAFCLKYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSW 163
+ D G Q+H C+K G+D V G+SL+DMY + + + +F + KN V+W
Sbjct: 111 S-VPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+L+ G A + + F M EG P F+++SV +A+AS G+L+ G+ VHA +K
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G + FV N+L++MYAK G +EDA+ VFN + RD+VSWN+++ G + ++
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F + Q T+ V+ C++ L + + + KHG D +
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
G L AL W A++ C + ++ L R+ E
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/560 (41%), Positives = 351/560 (62%), Gaps = 7/560 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++E + VH HI + + + N ++N Y K L+EA+ LFD+MP +++V+WT +IS
Sbjct: 301 VREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISA 360
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS + A+ L + M R G+ PN FT SSVL+A D K Q+H++ +K G +
Sbjct: 361 YSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRAC-ERLYDLK---QLHSWIMKVGLES 416
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+V S+L+D+Y++ ++ +A +F + + + V WN++IA A+ S+G++AL + M
Sbjct: 417 DVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMR 476
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R GF + +SV A S LE G+ H HV+K L+ + N L+DMY K GS+E
Sbjct: 477 RVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLI--LNNALLDMYCKCGSLE 534
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DA+ +FNR+ K+DV+SW++M+ G AQ+G + FE M G PN +T L VL ACS
Sbjct: 535 DAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACS 594
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
HAGL++EG YF M +G++P HY +DLLGRA LD +K I EM EP W
Sbjct: 595 HAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTW 654
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
LL ACR +NV+L YAA+ I +LDP D+G ++LL+NIYA + R ND A R+ MK+
Sbjct: 655 RTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKR 714
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G++KEP CSW+E +H F+ D +HPQ I+++ + ++ GYVPD++ VL
Sbjct: 715 GIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDL 774
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ ++RE L+ HSEKLA+ F ++S P TI I KN+++CGDCH K +++ +R I++
Sbjct: 775 EGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVI 834
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD R+HHF+DG CSCGDYW
Sbjct: 835 RDPIRYHHFQDGVCSCGDYW 854
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 155/286 (54%), Gaps = 17/286 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK+ +H+ I+ ++D+ +++ +++ Y+K G L EA K+F EM D V W
Sbjct: 396 CERLYDLKQ---LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVW 452
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ ++Q+ + A+ L+ M R+G +Q TL+SVL+A + + + GRQ H L
Sbjct: 453 NSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLE-LGRQAHVHVL 511
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K +D ++ + ++LLDMY + ++DA F+F + K+ +SW+ +IAG A+ +AL
Sbjct: 512 K--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALN 569
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-----NTL 236
F M +G +P H + V A + G + +G W + +S L +
Sbjct: 570 LFESMKVQGPKPNHITILGVLFACSHAGLVNEG-W---YYFRSMNNLYGIDPGREHYGCM 625
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC-AQHGLGKAT 280
+D+ ++ ++D K+ + + + DVV+W ++L C A+ + AT
Sbjct: 626 LDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLAT 671
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 4/212 (1%)
Query: 167 IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
+ H + + A+ M R G +YS + + G++ +GK VH H+ +G
Sbjct: 257 LLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGY 316
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
F+ N L++MY K +E+A+ +F+++ +R+VVSW +M++ + L +R
Sbjct: 317 HPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAF 376
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
M R+G+ PN TF VL AC L D Q + +MK G+E + +D+ + G
Sbjct: 377 MFRDGVMPNMFTFSSVLRACER--LYDLKQLHSWIMKV-GLESDVFVRSALIDVYSKMGE 433
Query: 347 LDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
L ALK REM + + VW +++ A H +
Sbjct: 434 LLEALKVFREM-MTGDSVVWNSIIAAFAQHSD 464
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/524 (45%), Positives = 338/524 (64%), Gaps = 2/524 (0%)
Query: 44 DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS 103
+ RK+FDEM +D V+W LI G +++ + + A+ + +M R G P+ FTLS+VL
Sbjct: 121 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 180
Query: 104 GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSW 163
A D K G VH + +K G+D +V+VGSSL+DMYA QMD + +F + + V W
Sbjct: 181 -AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLW 239
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
N+++AG+A+ E+AL F ML+ G P ++SS+ A + L GK +HA++I+
Sbjct: 240 NSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIR 299
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
+ F+ ++L+DMY K G+++ A +VFN + D+VSW +M+ G A HG
Sbjct: 300 ARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVL 359
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLG 342
FE+M + PN +TFL VLTACSHAGL+D G YF ++ ++G P H D LG
Sbjct: 360 FERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLG 419
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
RAG LD A FI EM I+PT++VW LL ACR+HKN L A++IFEL+P G H++
Sbjct: 420 RAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVI 479
Query: 403 LANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKK 462
L+N+Y+++GR N+AA+ RK M+ G+KKEPACSW+E KN +H+F+A+D +HP I
Sbjct: 480 LSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDA 539
Query: 463 WREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKN 522
SE++ + GYVP+ VL +++++ L HSEKLA+ F +ISTPPG+TI + KN
Sbjct: 540 LNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKN 599
Query: 523 IRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+RVC DCH A KF SK+V REI+VRD NRFH F+DG CSCGD+W
Sbjct: 600 LRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 149/270 (55%), Gaps = 5/270 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+K +VH + + + F ND+ + +++++ YA C +D + K+FD D V W ++++G
Sbjct: 186 IKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAG 245
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+QN E A+ +F +ML+ G++P T SS++ A G + + G+Q+HA+ ++ ++
Sbjct: 246 YAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFG-NLSLLRLGKQLHAYLIRARFND 304
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N+++ SSL+DMY + +D A +F ++S + VSW A+I G+A +A F M
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 364
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGS 245
+P H ++ +V TA + G ++ G W + + + + V + + L D ++G
Sbjct: 365 LGNVKPNHITFLAVLTACSHAGLVDNG-WKYFNSMSNQYGFVPSLEHCAALADTLGRAGD 423
Query: 246 IEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+++A + + +K W+++L C H
Sbjct: 424 LDEAYNFISEMKIKPTSSVWSTLLRACRVH 453
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L L+ + +HA+++ + F ++I + +++++ Y KCG +D AR++F+ + D+V+WTA
Sbjct: 283 NLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTA 342
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I GY+ + A +LF +M +KPN T +VL A D + ++ +Y
Sbjct: 343 MIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQY 402
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALI 167
G+ ++ ++L D R +D+A+ + ++ K S W+ L+
Sbjct: 403 GFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 25/242 (10%)
Query: 162 SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL---EQGKWVH 218
SW I A + + A+ F +M R P +S+ AL S L +H
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAK--------------------SGSIEDAEKVFNRLLK 258
A I+SG F N L+++ K S + E KVF+ +L+
Sbjct: 73 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
RD VSWN+++ GCA+H + + +M R+G P+ T VL + + G
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
K+G + + + +D+ +D ++K + A +W ++L + +
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLAGYAQNGS 251
Query: 379 VE 380
VE
Sbjct: 252 VE 253
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/565 (39%), Positives = 358/565 (63%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK+ R +H I+ + + D ++ +L+ YAKCG L +AR +F+ + +++V W
Sbjct: 417 CSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAW 476
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ Y Q+++ +NA+ F +L+ G+KP+ T +S+L + + G+ V + +
Sbjct: 477 NAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALE-LGKWVQSLII 535
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ ++++ ++L+ M+ + A LF + ++ VSWN +IAG + E + A
Sbjct: 536 RAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFD 595
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P +++ + A AS +L +G+ +HA + ++ VG L+ MY
Sbjct: 596 YFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYT 655
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI+DA VF+ L K++V SW SM+TG AQHG GK + F +M + G+ P+ +TF+
Sbjct: 656 KCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVG 715
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+AC+HAGL+ EG +F MK +EP HY VDL GRAGLL A++FI +M ++P
Sbjct: 716 ALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKP 775
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ +WGALLGAC++H +VEL A++ ELDP+D G +++L+NIYA+AG + + RK
Sbjct: 776 DSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRK 835
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M + GV K+P SW+E VH+F ++D HPQ IH + + ++K++GYVPD+ +
Sbjct: 836 VMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRY 895
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + E+E L HSE+LA+A+ L+ TPP + I I KN+RVCGDCH+A K SK+ +
Sbjct: 896 VLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITK 955
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+II RD+NRFHHF+DG CSCGD+W
Sbjct: 956 RQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 238/453 (52%), Gaps = 11/453 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + +H HI S + DI M N +++ YAKCG + A+++FDEMP KD+ +W
Sbjct: 114 CIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSW 173
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ GY Q+ + E A L QM++ G+KP+++T +L A DK G ++ + L
Sbjct: 174 NLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDK-GGELFSLIL 232
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+D +++VG++L++M+ + +DDA +F L ++ ++W ++I G AR + ++A
Sbjct: 233 NAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACN 292
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M EG +P ++ S+ A +LEQGK VHA + + G +VG L+ MY
Sbjct: 293 LFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYT 352
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VFN + R+VVSW +M+ G AQHG + +F KM+ +GI PN+VTF+
Sbjct: 353 KCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMS 412
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L ACS L +G+ + K G ++ + + + G L A + +
Sbjct: 413 ILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQN 472
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDAARA 419
A W A++ A H+ + + + + + P DS + N+ S L
Sbjct: 473 VVA-WNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCKSPDALELGKWV 530
Query: 420 RKMMKESGVKKEPACSWVETKNA-VHMFVANDD 451
+ ++ +G + + + +NA V MFV D
Sbjct: 531 QSLIIRAGFESD-----LHIRNALVSMFVNCGD 558
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 233/457 (50%), Gaps = 12/457 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K + + + + IL + + D+ + ++N + KCG +D+A K+F+ +P +D++TW
Sbjct: 215 CADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITW 274
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+G +++ Q + A LF M G++P++ S+LKA ++ G++VHA
Sbjct: 275 TSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ-GKRVHARMK 333
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D +YVG++LL MY + M+DA +F ++ +N VSW A+IAG A+ E+A
Sbjct: 334 EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFL 393
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M+ G EP ++ S+ A + +L+QG+ +H +IK+G V L+ MYA
Sbjct: 394 FFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYA 453
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ DA VF R+ K++VV+WN+M+T QH V F+ +L+ GI P+ TF
Sbjct: 454 KCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTS 513
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L C L+ G+ +L+ + G E + V + G L A+ +MP E
Sbjct: 514 ILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ER 572
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDAARA 419
W ++ H + + + E + P D L N AS L + R
Sbjct: 573 DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKP-DQITFTGLLNACASPEALTEGRRL 631
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFV---ANDDAH 453
++ E+ + C V + M+ + DDAH
Sbjct: 632 HALITEAALD----CDVVVGTGLISMYTKCGSIDDAH 664
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 158/382 (41%), Gaps = 62/382 (16%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
++ KN NA + ++ + +A+ + + +YSS+ +L G
Sbjct: 64 VDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDG 123
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ +H H+ S Q F+ N L+ MYAK G+ A+++F+ + +DV SWN +L G QH
Sbjct: 124 ERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQH 183
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
+ R E+M+++G+ P++ TF+ +L AC+ A +D+G F+L+ G + +
Sbjct: 184 RRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVG 243
Query: 335 VTFVDLLGRAGLLDRALKFIREMP----------------------------------IE 360
+++ + G +D ALK +P ++
Sbjct: 244 TALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI--LLANIYASAGRLNDAAR 418
P + +LL AC + +E G R+ E+ D+ ++ L ++Y G + DA
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGL-DTEIYVGTALLSMYTKCGSMEDALE 362
Query: 419 ARKMMKESGVKKEPAC----------------------SWVETKNAVHMFVANDDAHPQR 456
++K V A S +E M + + P
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422
Query: 457 AMIHKKWREISEKIKQIGYVPD 478
K+ R+I ++I + GY+ D
Sbjct: 423 L---KQGRQIHDRIIKAGYITD 441
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/566 (41%), Positives = 360/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + + HA IL K D+ N ++N Y+KCG +D AR++FDEMP + +V+W
Sbjct: 74 CAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSW 133
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I +QN + A+ L QM R G ++FT+SSVL A A + + +HAF +
Sbjct: 134 NTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE-CQLLHAFAI 192
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D NV+V ++LLD+YA+ M DA +F ++ ++ V+W+++ AG+ + E+AL
Sbjct: 193 KAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALA 252
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + G + F SSV A A ++ +GK V+A + KSG FV ++L+DMYA
Sbjct: 253 LFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYA 312
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IE++ KVF + KR+VV WN+M++G ++H + FEKM + G++PN VTF+
Sbjct: 313 KCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVS 372
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC H GL+ +GQ YF LM K+H + P HY VD L RAG + A I ++P
Sbjct: 373 VLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFN 432
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+A++WG+LL +CR H N+EL AA+++F+++PH+SG ++LL+N+YA+ G+ ++ A+ R
Sbjct: 433 ASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMR 492
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K++KES VKKE SW+E K+ VH+F+ + HP+ I+ K E+ ++++++GY ++
Sbjct: 493 KLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQ 552
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
H L + ++ L+ HSEKLA L+ PP + I I KN+R+CGDCHS K ASK
Sbjct: 553 HDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFF 612
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R++IVRDTNRFHHF++G CSCGD+W
Sbjct: 613 CRDVIVRDTNRFHHFKNGCCSCGDFW 638
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/602 (40%), Positives = 356/602 (59%), Gaps = 38/602 (6%)
Query: 2 CTHLKKLKEARIVHAHILG-SAFKNDIAMQNTILNAYAKC-------------------- 40
CT+L L+ R +H + + +D+ + N++++ YAKC
Sbjct: 372 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 431
Query: 41 -----------GCLDEARKLFDEMPVK----DMVTWTALISGYSQNDQPENAIILFSQML 85
G +EA +L EM + D++TW L++G++Q + A+ F +M
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH 491
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+G+ PN T+S L A G + K G+++H + L+ + + VGS+L+ MY+ D +
Sbjct: 492 SMGMDPNTTTISGALAACGQ-VRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A +F+ L +++ V WN++I+ A+ AL EM E + S A
Sbjct: 551 EVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 610
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+ +L QGK +H +I+ G F+ N+L+DMY + GSI+ + ++F+ + +RD+VSWN
Sbjct: 611 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 670
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-K 324
M++ HG G V F++ G+ PN +TF +L+ACSH+GL++EG YF +MK +
Sbjct: 671 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ ++P Y VDLL RAG + L+FI +MP EP AAVWG+LLGACR+H N +L Y
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA +FEL+P SG ++L+ANIY++AGR DAA+ R +MKE GV K P CSW+E K +H
Sbjct: 791 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLH 850
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
FV D +HP I K + IK+IGYVPD++ VL D+ E+E L HSEK+AL
Sbjct: 851 SFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIAL 910
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF LIST G+ + I KN+RVCGDCHSA KF SKV +R+II+RD RFHHF DG CSCGD
Sbjct: 911 AFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGD 970
Query: 565 YW 566
YW
Sbjct: 971 YW 972
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 221/450 (49%), Gaps = 52/450 (11%)
Query: 21 SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKD----MVTWTALISGYSQNDQPE 75
S K D N I++ YA+ G +EA K F EM +KD +V+WTALI+G QN
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDF 344
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG-YDWNVYVGSS 134
A+ +F +M+ G+KPN T++S + A + + GR++H +C+K D ++ VG+S
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSAC-TNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
L+D YA+ ++ A F ++ + VSWNA++AG+A + E+A+ SEM +G EP
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 195 HFSYSSVFT--------------------------------ALASTG---SLEQGKWVHA 219
+++ + T ALA+ G +L+ GK +H
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHG 523
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+V+++ +L VG+ L+ MY+ S+E A VF+ L RDVV WNS+++ CAQ G
Sbjct: 524 YVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
+ +M + + N VT + L ACS L +G+ + + G++ + +D
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH--KNVELGAYAAERIFELDPHDS 397
+ GR G + ++ + MP + W ++ MH + + R L P+
Sbjct: 644 MYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPN-- 700
Query: 398 GPHILLANIYAS---AGRLNDAARARKMMK 424
HI N+ ++ +G + + + KMMK
Sbjct: 701 --HITFTNLLSACSHSGLIEEGWKYFKMMK 728
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 156/321 (48%), Gaps = 41/321 (12%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KC L L+ VHA ++ + + + +L Y + GC+++AR++FD+M +++ +
Sbjct: 98 KCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFS 157
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA++ Y E I LF M+ G++P+ F V KA + + + G+ V+ +
Sbjct: 158 WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKAC-SELKNYRVGKDVYDYM 216
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L G++ N V S+LDM+ + +MD A F +E K+ WN +++G+ K E +KAL
Sbjct: 217 LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ S+M G +P +++++ + Y
Sbjct: 277 KCISDMKLSGVKPDQVTWNAIISG-----------------------------------Y 301
Query: 241 AKSGSIEDAEKVFNRL-----LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
A+SG E+A K F + K +VVSW +++ G Q+G + F KM+ G+ PN
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 296 QVTFLCVLTACSHAGLLDEGQ 316
+T ++AC++ LL G+
Sbjct: 362 SITIASAVSACTNLSLLRHGR 382
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 203/456 (44%), Gaps = 66/456 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK + + V+ ++L F+ + ++ +IL+ + KCG +D AR+ F+E+ KD+ W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++SGY+ + + A+ S M G+KP+Q T
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT-------------------------- 293
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALES-----KNEVSWNALIAGHARKSEG 176
WN +++ YA+ Q ++A F + N VSW ALIAG +
Sbjct: 294 -----WN-----AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYD 343
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--FVGN 234
+AL F +M+ EG +P + +S +A + L G+ +H + IK +L + VGN
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGN 402
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+LVD YAK S+E A + F + + D+VSWN+ML G A G + + +M GI P
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ +T+ ++T + G +F M G++P + T L G + R LK
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDP---NTTTISGALAACGQV-RNLKLG 518
Query: 355 REM-------PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIY 407
+E+ IE + V AL+ M+ + A EL D + +
Sbjct: 519 KEIHGYVLRNHIELSTGVGSALIS---MYSGCDSLEVACSVFSELSTRDVVVWNSIISAC 575
Query: 408 ASAGRLNDAARARKMMKESGVKKE--------PACS 435
A +GR +A + M S V+ PACS
Sbjct: 576 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 611
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 160/326 (49%), Gaps = 14/326 (4%)
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 170
+ G QVHA + G D ++GS LL++Y + ++DA +F + +N SW A++ +
Sbjct: 106 RLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMY 165
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ E+ ++ F M+ EG P HF + VF A + + GK V+ +++ G + +
Sbjct: 166 CGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 225
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V +++DM+ K G ++ A + F + +DV WN M++G G K ++ M +
Sbjct: 226 CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLS 285
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG---RAGLL 347
G+ P+QVT+ +++ + +G +E YF ++ G++ + + V++ L+ + G
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYF--LEMGGLKDFKPNVVSWTALIAGSEQNGYD 343
Query: 348 DRALKFIREMPIE---PTAAVWGALLGACR----MHKNVELGAYAAERIFELDPHDSGPH 400
AL R+M +E P + + + AC + E+ Y ++ ELD D
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI-KVEELDS-DLLVG 401
Query: 401 ILLANIYASAGRLNDAARARKMMKES 426
L + YA + A R M+K++
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQT 427
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+S+ +L G VHA ++ +G + F+G+ L+++Y ++G +EDA ++F+++
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R+V SW +++ G + T++ F M+ G+ P+ F V ACS G+
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ M G E + +D+ + G +D A +F E+
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/546 (41%), Positives = 359/546 (65%), Gaps = 6/546 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ M NT++ +CG ++++++LF EM +D ++WT++I+G++QN +AI +F +
Sbjct: 206 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 265
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M L+ +Q+T SVL A G G + G+QVHA+ ++ Y N++V S+L+DMY +
Sbjct: 266 MKLENLQMDQYTFGSVLTACG-GVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCK 324
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ A +F + KN VSW A++ G+ + E+A++TFS+M + G EP F+ SV +
Sbjct: 325 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAF--VGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
+ A+ SLE+G HA + SG L++F V N LV +Y K GSIED+ ++FN + +D
Sbjct: 385 SCANLASLEEGAQFHARALTSG--LISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDE 442
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-A 320
V+W ++++G AQ G T+ FE ML +G+ P++VTF+ VL+ACS AGL+++G F +
Sbjct: 443 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFES 502
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
++ +HG+ P + HY +DL RAG ++ A FI +MP P A W LL +CR + N++
Sbjct: 503 MINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMD 562
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
+G +AAE + ELDPH++ ++LL+++YA+ G+ + AR RK M++ G++KEP CSW++ K
Sbjct: 563 IGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYK 622
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
N VH+F A+D ++P I+ + +++ K+ + GYVPD + VL E+ L HSE
Sbjct: 623 NQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSE 682
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
KLA+AF L+ PPG I + KN+RVC DCH+A K+ SK+ REI+VRDT RFH F+DG C
Sbjct: 683 KLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTC 742
Query: 561 SCGDYW 566
SCGD+W
Sbjct: 743 SCGDFW 748
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 158/276 (57%), Gaps = 3/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+E + VHA+I+ + +K++I + + +++ Y KC + A +F +M K++V+W
Sbjct: 285 CGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSW 344
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY QN E A+ FS M + G++P+ FTL SV+ + A+ ++ G Q HA L
Sbjct: 345 TAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEE-GAQFHARAL 403
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++D+ LF + K+EV+W AL++G+A+ + + +
Sbjct: 404 TSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIG 463
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMY 240
F ML G +P ++ V +A + G +E+G + +I G + + ++D++
Sbjct: 464 LFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLF 523
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
+++G IE+A N++ D +SW ++L+ C +G
Sbjct: 524 SRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYG 559
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 150/323 (46%), Gaps = 67/323 (20%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N+Y +++L Y++ ++ + +LF A+ ++ VSWN+LI+G+A ++++ ++ ML
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 188 RE--GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+ F ++S++ + G ++ G+ +H HV+K G FVG+ LVDMY+K G
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 246 I-------------------------------EDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
I ED++++F + +RD +SW SM+TG Q+
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM------------ 322
GL + + F +M + +Q TF VLTAC L EG+ A +
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313
Query: 323 --------KKHGVEPEEAHY--------VTFVDLL---GRAGLLDRALKFIREMP---IE 360
K ++ EA + V++ +L G+ G + A+K +M IE
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 361 PTAAVWGALLGACRMHKNVELGA 383
P G+++ +C ++E GA
Sbjct: 374 PDDFTLGSVISSCANLASLEEGA 396
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 39/261 (14%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR-- 255
Y ++ T + + K +H+H+IK+ F+ N L+ YAK GSI A KVF++
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 256 -----------------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+ +RD VSWNS+++G A GL +V+ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 287 MLRN--GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
ML+N N++TF +L S G + G+ + K G VD+ +
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI-FELDPHDSGPHILL 403
G++ A K E+P E ++ L+ VE ++R+ FE+ DS +
Sbjct: 192 GMISCARKVFDELP-EKNVVMYNTLIMGLMRCGRVE----DSKRLFFEMRERDSISWTSM 246
Query: 404 ANIYASAGRLNDAARARKMMK 424
+ G DA + MK
Sbjct: 247 ITGFTQNGLDRDAIDIFREMK 267
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/567 (43%), Positives = 355/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ + +H L +++ + + + + Y+KCG + +A K+F+EMP KD V+W
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 175
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GYS+ + E A++ F +M+ + +Q L S L A GA KFGR VH+ +
Sbjct: 176 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA-LKACKFGRSVHSSVV 234
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLF-TALESKNEVSWNALIAGHARKSEGEKAL 180
K G++ +++VG++L DMY++ M+ A +F E +N VS+ LI G+ + EK L
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 294
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ R+G EP F++SS+ A A+ +LEQG +HA V+K FV + LVDMY
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 354
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +E A + F+ + ++WNS+++ QHGLGK ++ FE+M+ G+ PN +TF+
Sbjct: 355 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 414
Query: 301 CVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+LT CSHAGL++EG YF M K +GV P E HY +DLLGRAG L A +FI MP
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP A W + LGACR+H + E+G AAE++ +L+P +SG +LL+NIYA+ + D
Sbjct: 475 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 534
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ VKK P SWV+ H+F A D +HP+++ I++K + ++IK GYVP +
Sbjct: 535 RMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRT 594
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V D +E L HSE++A+AFALIS P G I +KKN+RVC DCHSA KF SKV
Sbjct: 595 DSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 654
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R+IIVRD +RFHHF DG CSCGDYW
Sbjct: 655 TGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 206/372 (55%), Gaps = 3/372 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K+L+ + +HA ++ + + + N ++N Y+KCG LD A KLFD MP +++V+WTA+I
Sbjct: 19 KRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
SG SQN + AI F M G P QF SS ++A A + G+Q+H LK+G
Sbjct: 79 SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRAC-ASLGSIEMGKQMHCLALKFGI 137
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++VGS+L DMY++ M DA +F + K+EVSW A+I G+++ E E+AL F +
Sbjct: 138 GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKK 197
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M+ E S A + + + G+ VH+ V+K G + FVGN L DMY+K+G
Sbjct: 198 MIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 246 IEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+E A VF + R+VVS+ ++ G + + + F ++ R GI PN+ TF ++
Sbjct: 258 MESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC++ L++G A + K + + VD+ G+ GLL++A++ E+ +PT
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEI 376
Query: 365 VWGALLGACRMH 376
W +L+ H
Sbjct: 377 AWNSLVSVFGQH 388
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
MLR+ H V A T L +GK +HA +I +G F+ N LV+MY+K G
Sbjct: 1 MLRDTNALAH-----VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE 55
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ A K+F+ + +R++VSW +M++G +Q+ +R F M G P Q F + A
Sbjct: 56 LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRA 115
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ G ++ G+ L K G+ E D+ + G + A K EMP + +
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS- 174
Query: 366 WGALL 370
W A++
Sbjct: 175 WTAMI 179
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/595 (40%), Positives = 359/595 (60%), Gaps = 38/595 (6%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+ ++++AR++ IL ++ N I+ Y + G L EA+ LF +MPVK+ +W A
Sbjct: 470 QVGRIQKARLIFDEILNP----NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAA 525
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I+G+ QN++ A+ L ++ R G P+ + +S L A A D + GR +H+ +K
Sbjct: 526 MIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSAC-ANIGDVEIGRVIHSLAIKT 584
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG-------------- 169
G +N YV + L+ MYA+ ++D +F + K+ VSWN+LI+G
Sbjct: 585 GCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVF 644
Query: 170 -----------------HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ + GE AL F +ML G +P + +S+ +A + G+++
Sbjct: 645 EKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIK 704
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
G+ HA + K G FVGN+L+ MY K G ED VF + + D+++WN++L GCA
Sbjct: 705 LGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCA 763
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEE 331
Q+GLGK ++ FE+M GI P+Q++FL VL ACSHAGL+DEG +F ++ +K+G+ P
Sbjct: 764 QNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLV 823
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGRAG L A I MP++P + +W ALLGACR+H+NVELG AER+F+
Sbjct: 824 YHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQ 883
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
+ S ++LL+N++AS G + A RK+MK+ G+ KEP SW++ KN +H FV D
Sbjct: 884 MTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDR 943
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
H Q I+ +E + GY+PD++ VL ++++++ +L HSEKLA+ F ++ST
Sbjct: 944 THDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILST 1003
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
P GS I I KN+R+CGDCH+ KF SKV R+II+RD NRFHHFRDG CSCGDYW
Sbjct: 1004 PNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 179/364 (49%), Gaps = 40/364 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ ++ R++H+ + + + + + N +++ YAKCG +++ +F + VKD V+W
Sbjct: 565 CANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSW 624
Query: 62 TALISGYSQN-------------------------------DQPENAIILFSQMLRLGLK 90
+LISG S+N E A+ LF ML G+K
Sbjct: 625 NSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIK 684
Query: 91 PNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
PNQ T++S+L A G GA K G Q HA K G+D ++VG+SL+ MY + +D +
Sbjct: 685 PNQLTVTSLLSACGNLGAI--KLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGF 741
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + + ++WNA++ G A+ G++A++ F +M EG P S+ V A + G
Sbjct: 742 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAG 801
Query: 210 SLEQGKWVHAHVI--KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF-NRLLKRDVVSWNS 266
+++G W H + + K G + + +VD+ ++G + +AE + N +K D V W +
Sbjct: 802 LVDEG-WAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEA 860
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
+L C H + R E++ + P T++ + + G+ D+ LMK G
Sbjct: 861 LLGACRIHRNVELGQRVAERLFQM-TKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQG 919
Query: 327 VEPE 330
+ E
Sbjct: 920 LTKE 923
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 175/347 (50%), Gaps = 10/347 (2%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++A N+++ Y C + EAR+LFD+MP ++ V+W +ISGY A +F +
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R +P+Q VL A G D + + +K GY+ +V VGS++L+ Y R
Sbjct: 352 MCRTVARPDQSIFVVVLSAI-TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+D A F + +NE SW +IA A+ + A++ + + E T + +++ T
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP----EQTVATKTAMMT 466
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A A G +++ + + ++ +VA+ N ++ Y ++G +++A+ +F ++ ++ S
Sbjct: 467 AYAQVGRIQKARLIFDEILNP--NVVAW--NAIIAGYTQNGMLKEAKDLFQKMPVKNSAS 522
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +M+ G Q+ + + ++ R+G P+ +F L+AC++ G ++ G+ +L
Sbjct: 523 WAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAI 582
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
K G + + + + G ++ R + ++ T + W +L+
Sbjct: 583 KTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS-WNSLI 628
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 173/368 (47%), Gaps = 22/368 (5%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L +++EAR + + D+ N+++N Y++ G +DEAR LFD K++ TWT L
Sbjct: 184 LGRVEEAR----RVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTIL 239
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++GY++ + E A +F M + +S ++ D K R++
Sbjct: 240 LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNG-----DLKNARKL----FDEM 290
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ NV +S++ Y +M +A LF + +N VSW +I+G+ S+ +A F
Sbjct: 291 PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 350
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M R P + V +A+ LE + IK+G + VG+ +++ Y ++G
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S++ A F + +R+ SW +M+ AQ G ++ +E++ +A T ++T
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMT 466
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
A + G + + + L+ + P + + + G+L A ++MP++ +A+
Sbjct: 467 AYAQVGRIQKAR----LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSAS 522
Query: 365 VWGALLGA 372
W A++
Sbjct: 523 -WAAMIAG 529
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 211 LEQGKWVHAHVIKSGG------QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
L+Q K+V H KSG Q F NT + + G +E+A +VFN +++RDVVSW
Sbjct: 148 LQQFKFVIRH--KSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSW 205
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
NSM+ G +Q+G F+ + N T+ +LT + G ++E + F M +
Sbjct: 206 NSMINGYSQNGKVDEARLLFDAF----VGKNIRTWTILLTGYAKEGRIEEAREVFESMTE 261
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GAC---RMHKNVE 380
V A +V + G L A K EMP E A W +++ G C RM + E
Sbjct: 262 RNVVSWNAMISGYV----QNGDLKNARKLFDEMP-EKNVASWNSVVTGYCHCYRMSEARE 316
Query: 381 LGAYAAER 388
L ER
Sbjct: 317 LFDQMPER 324
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/598 (39%), Positives = 368/598 (61%), Gaps = 34/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
C + +E + +H H+L ++D + +++N YA+ G
Sbjct: 142 CAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSF 201
Query: 42 -----------CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
CLD+AR+LF+E+PV+D V+W A+I+GY+Q+ + E A+ F +M R +
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN+ T+ +VL A A + + G V ++ +G N+ + ++L+DMY++ +D A
Sbjct: 262 PNESTMVTVLSAC-AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + K+ +SWN +I G++ + ++AL F +M + EP ++ S+ A A G+
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 211 LEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L+ GKW+HA++ K G + +L+DMYAK G+IE A++VF + + + SWN+M++
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMIS 440
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVE 328
G A HG + F +M G P+ +TF+ VL+ACSHAGL++ G Q + ++++ + +
Sbjct: 441 GLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDIS 500
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P+ HY +DLLGRAGL D A ++ M ++P A+WG+LLGACR+H NVELG +AA+
Sbjct: 501 PKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKH 560
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FEL+P + G ++LL+NIYA+AGR +D AR R + + G+KK P CS +E + VH F+
Sbjct: 561 LFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLV 620
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D H Q I+K EI + +++ G+VPD+S VL D++ +E L HSEKLA+AF L
Sbjct: 621 GDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGL 680
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
IST P +TI I KN+RVCG+CHSA K SK+ REII RD NRFHHF+DG CSC DYW
Sbjct: 681 ISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 211/436 (48%), Gaps = 51/436 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKN-DIAMQNTI-LNAYAKCGCLDEARKLFDEMPVKDMV 59
C + LK+ +H+ I+ + N A+ I A + G L A LF+ + +
Sbjct: 42 CKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQF 98
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHA 118
W +I G S + P AI + +ML G++PN +T +LK+ GAT + G+Q+H
Sbjct: 99 IWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE--GKQIHG 156
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQ-------------------------------MDD 147
LK G + + +V +SL++MYA+ + +DD
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + ++ VSWNA+IAG+A+ E+AL F EM R P + +V +A A
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 208 TGSLEQGKWVHA----HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+GSLE G WV + H + S +LV N L+DMY+K G ++ A +F + ++D++S
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLV----NALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN M+ G + K + F KM ++ + PN VTF+ +L AC++ G LD G+ A +
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 324 KHGVE-PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM--HKNVE 380
K + + + + +D+ + G ++ A + M + + W A++ M H N+
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS-WNAMISGLAMHGHANMA 451
Query: 381 LGAYAAERIFELDPHD 396
L + R +P D
Sbjct: 452 LELFRQMRDEGFEPDD 467
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 27/268 (10%)
Query: 179 ALRTFSEMLREGFEPTHFSYSS-----------VFTALASTGSLEQGKWVHAHVIKSGGQ 227
AL +FS L HF +S T L++ S + K +H+ +IK+G
Sbjct: 2 ALASFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLH 61
Query: 228 LVAFVGNTLVDMYAKS--GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
F + L++ A S G++ A +F + + + WN+M+ G + + ++
Sbjct: 62 NTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYV 121
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+ML G+ PN TF +L +C+ G EG+ + K G+E + + + +++ + G
Sbjct: 122 RMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNG 181
Query: 346 LLDRA-LKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP-HDSGPH 400
L A L F + + TA + G L C A R+FE P D+
Sbjct: 182 ELGYAELVFSKSSLRDAVSFTALITGYTLRGC---------LDDARRLFEEIPVRDAVSW 232
Query: 401 ILLANIYASAGRLNDAARARKMMKESGV 428
+ YA +GR +A + MK + V
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANV 260
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/567 (43%), Positives = 355/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ + +H L +++ + + + + Y+KCG + +A K+F+EMP KD V+W
Sbjct: 51 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 110
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GYS+ + E A++ F +M+ + +Q L S L A GA KFGR VH+ +
Sbjct: 111 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA-LKACKFGRSVHSSVV 169
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLF-TALESKNEVSWNALIAGHARKSEGEKAL 180
K G++ +++VG++L DMY++ M+ A +F E +N VS+ LI G+ + EK L
Sbjct: 170 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 229
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ R+G EP F++SS+ A A+ +LEQG +HA V+K FV + LVDMY
Sbjct: 230 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 289
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +E A + F+ + ++WNS+++ QHGLGK ++ FE+M+ G+ PN +TF+
Sbjct: 290 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 349
Query: 301 CVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+LT CSHAGL++EG YF M K +GV P E HY +DLLGRAG L A +FI MP
Sbjct: 350 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 409
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP A W + LGACR+H + E+G AAE++ +L+P +SG +LL+NIYA+ + D
Sbjct: 410 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 469
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ VKK P SWV+ H+F A D +HP+++ I++K + ++IK GYVP +
Sbjct: 470 RMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRT 529
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V D +E L HSE++A+AFALIS P G I +KKN+RVC DCHSA KF SKV
Sbjct: 530 DSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 589
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R+IIVRD +RFHHF DG CSCGDYW
Sbjct: 590 TGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 177/325 (54%), Gaps = 3/325 (0%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
MP +++V+WTA+ISG SQN + AI F M G P QF SS ++A A +
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRAC-ASLGSIEM 59
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G+Q+H LK+G ++VGS+L DMY++ M DA +F + K+EVSW A+I G+++
Sbjct: 60 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
E E+AL F +M+ E S A + + + G+ VH+ V+K G + FV
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
GN L DMY+K+G +E A VF + R+VVS+ ++ G + + + F ++ R G
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
I PN+ TF ++ AC++ L++G A + K + + VD+ G+ GLL++A+
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299
Query: 352 KFIREMPIEPTAAVWGALLGACRMH 376
+ E+ +PT W +L+ H
Sbjct: 300 QAFDEIG-DPTEIAWNSLVSVFGQH 323
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/599 (39%), Positives = 360/599 (60%), Gaps = 34/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
CT ++ E + VHAH+L +++ + +++N YA+ G
Sbjct: 138 CTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSF 197
Query: 42 -----------CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
LDEAR+LFDE+PV+D+V+W A+ISGY+Q+ + E A+ F +M R +
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT 257
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN T+ SVL A + + G V ++ G N+ + + L+DMY + +++A
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASN 317
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF ++ KN VSWN +I G+ S ++AL F M++ +P ++ S+ A A+ G+
Sbjct: 318 LFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA 377
Query: 211 LEQGKWVHAHVIKSGGQLVAFVG--NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
L+ GKWVHA+V K+ + V +L+DMYAK G + A+++F+ + + + +WN+M+
Sbjct: 378 LDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMI 437
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGV 327
+G A HG + F +M G P+ +TF+ VLTAC HAGLL G+ YF+ +++ + V
Sbjct: 438 SGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKV 497
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DL GRAGL D A ++ M ++P A+W +LLGACR+H+ +EL A+
Sbjct: 498 SPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAK 557
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+FEL+P + ++LL+NIYA AGR D A+ R + ++ +KK P CS +E + VH F+
Sbjct: 558 HLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFL 617
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HPQ I+K EI ++++ G+VPD+S VL D++ +E L HSEKLA+AF
Sbjct: 618 VGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFG 677
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+TI I KN+RVCG+CHSA K SK+ REII RD NRFHHF+DG CSC DYW
Sbjct: 678 LISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 213/426 (50%), Gaps = 49/426 (11%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKND-IAMQNTI-LNAYAKCGCLDEARKLFDEMPVKDM 58
C L+ LK+ +H+ I+ + N A+ I A + G L A LF + +
Sbjct: 37 NCKTLQTLKQ---IHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNH 93
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA--GATDDKFGRQV 116
V W +I G S ++ P A+ + M+ G +PN++T S+ K+ GA + G+QV
Sbjct: 94 VIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHE---GKQV 150
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYAR----------FDQ---------------------M 145
HA LK G + N +V +SL++MYA+ FD+ +
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D+A LF + ++ VSWNA+I+G+A+ E+A+ F EM R P + SV +A
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270
Query: 206 ASTG-SLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A +G SL+ G WV + + G G + V N L+DMY K G +E+A +F ++ ++VVS
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLV-NGLIDMYVKCGDLEEASNLFEKIQDKNVVS 329
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN M+ G K + F +M+++ I PN VTFL +L AC++ G LD G+ A +
Sbjct: 330 WNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVD 389
Query: 324 KH--GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE- 380
K+ ++ A + + +D+ + G L A + M + + A W A++ MH + +
Sbjct: 390 KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHTDT 448
Query: 381 -LGAYA 385
LG ++
Sbjct: 449 ALGLFS 454
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS--GSIEDAEKVFNRLLKR 259
T L++ +L+ K +H+ +IK+G F + L++ A S G + A +F +
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+ V WN M+ G + + ++ M+ +G PN+ TF + +C+ EG+
Sbjct: 92 NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
A + K G+E + + +++ + G L A
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNA 182
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/586 (41%), Positives = 363/586 (61%), Gaps = 35/586 (5%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA I +++ + +++AY+ CG +D AR++FD + KDMV+WT +++ +++ND
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDC 220
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ LFSQM +G KPN FT +SV KA G A D G+ VH LK Y+ ++YVG
Sbjct: 221 FKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFD--VGKSVHGCALKSRYELDLYVG 278
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+LLD+Y + +DDA F + K+ + W+ +IA +A+ + ++A+ F +M +
Sbjct: 279 VALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVL 338
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P F+++SV A A+ L G +H HVIK G FV N L+D+YAK G +E++ ++
Sbjct: 339 PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMEL 398
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN---------------------- 290
F R+ V+WN+++ G Q G G+ +R F ML
Sbjct: 399 FAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 458
Query: 291 ---------GIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDL 340
+ P+++TF+ VL+AC++AGLLD+GQ YF ++++ HG+EP HY V L
Sbjct: 459 EPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWL 518
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
LGR G LD+A+K I E+P +P+ VW ALLGAC +H ++ELG +A+R+ E++P D H
Sbjct: 519 LGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATH 578
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LL+N+YA+A R ++ A RK MK GVKKEP SW+E++ VH F D +HP+ +I+
Sbjct: 579 VLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVIN 638
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK 520
+ K K+ GY+P+ + VL + +E+E L VHSE+LAL+F +I TP GS I I
Sbjct: 639 GMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIM 698
Query: 521 KNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+R+C DCH+A K SKVV+REI+VRD NRFHHF++G CSCGDYW
Sbjct: 699 KNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 191/358 (53%), Gaps = 3/358 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + +H IL D+ N +LN Y K L +A KLFDEMP ++ +++
Sbjct: 48 CIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISF 107
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD-DKFGRQVHAFC 120
LI GY+++ + AI LF ++ R G + N F +++LK +TD + G +HA
Sbjct: 108 VTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKL--LVSTDCGELGWGIHACI 165
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G++ N +VG++L+D Y+ ++D A +F + K+ VSW ++ A ++AL
Sbjct: 166 FKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEAL 225
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ FS+M GF+P +F+++SVF A + + GK VH +KS +L +VG L+D+Y
Sbjct: 226 KLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLY 285
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
KSG I+DA + F + K+DV+ W+ M+ AQ K V F +M + + PNQ TF
Sbjct: 286 TKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFA 345
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL AC+ L+ G + K G+ + +D+ + G ++ +++ E P
Sbjct: 346 SVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 403
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 14/265 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L +H H++ +D+ + N +++ YAKCG ++ + +LF E P ++ VTW
Sbjct: 351 CATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTW 410
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G+ Q E A+ LF ML ++ + T SS L+A + A + G Q+H+ +
Sbjct: 411 NTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEP-GLQIHSLTV 469
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-----WNALIAGHARKSEG 176
K D +VG +L A +D FT++ + + + ++ R
Sbjct: 470 K--PDKLTFVG--VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHL 525
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+KA++ E+ F+P+ + ++ A +E G+ V++ Q A L
Sbjct: 526 DKAVKLIDEI---PFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKA-THVLL 581
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDV 261
+MYA + ++ V + ++ V
Sbjct: 582 SNMYATAKRWDNVASVRKNMKRKGV 606
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/535 (43%), Positives = 344/535 (64%), Gaps = 2/535 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L+ YAKCG + +AR F+ +P D++ + +IS Y+Q++Q E A LF +++R + PN
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+++LSSVL+A D FG+Q+H +K G++ +++VG++L+D YA+ + MD + +F
Sbjct: 364 EYSLSSVLQACTNMVQLD-FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
++L NEVSWN ++ G ++ GE+AL F EM T +YSSV A AST S+
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+H + KS +GN+L+D YAK G I DA KVF L++RD++SWN++++G A
Sbjct: 483 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
HG + F++M ++ + N +TF+ +L+ CS GL++ G F M+ HG++P
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY V LLGRAG L+ AL+FI ++P P+A VW ALL +C +HKNV LG ++AE+I E
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 662
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
++P D ++LL+N+YA+AG L+ A RK M+ GV+K P SWVE K +H F
Sbjct: 663 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
HP +I+ ++ K + GY+PD + VL D++++ L VHSE+LALA+ L+ T
Sbjct: 723 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 782
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PPG I I KN+R C DCH+AF SK+V+REIIVRD NRFHHF DG CSCGDYW
Sbjct: 783 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 186/345 (53%), Gaps = 4/345 (1%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++AY+ C + +A +F+ + KD V WTA++S YS+ND PENA +FS+M G KPN
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
F L+SVLKA+ G+ +H +K D +VG +LLDMYA+ + DA F
Sbjct: 263 PFALTSVLKAA-VCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAF 321
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ + + + +I+ +A+ ++ E+A F ++R P +S SSV A + L+
Sbjct: 322 EMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLD 381
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
GK +H H IK G + FVGN L+D YAK ++ + K+F+ L + VSWN+++ G +
Sbjct: 382 FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFS 441
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEE 331
Q GLG+ + F +M + QVT+ VL AC S A + GQ + ++ +K +
Sbjct: 442 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI-EKSTFNNDT 500
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ +D + G + ALK + + +E W A++ +H
Sbjct: 501 VIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 544
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 177/358 (49%), Gaps = 3/358 (0%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C + R VH H++ G + D+ N +LN Y K G L AR+LFD MP ++MV
Sbjct: 69 CIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMV 128
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ L+ ++Q E A LF ++ G + NQF L+++LK + A G VH+
Sbjct: 129 SFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAG-GVHSC 187
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G+D N +VGS L+D Y+ + DA +F + K+ V W A+++ ++ E A
Sbjct: 188 AWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R FS+M G +P F+ +SV A S+ GK +H IK+ VG L+DM
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+DA F + DV+ + M++ AQ + F +++R+ + PN+ +
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
VL AC++ LD G+ K G E + +D + +D +LK +
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 166/329 (50%), Gaps = 16/329 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT++ +L + +H H + ++D+ + N +++ YAKC +D + K+F + + V+W
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 433
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ G+SQ+ E A+ +F +M + Q T SSVL+A + A+ G Q+H
Sbjct: 434 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG-QIHCSIE 492
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ + +G+SL+D YA+ + DA +F L ++ +SWNA+I+G+A + AL
Sbjct: 493 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 552
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M + E ++ ++ + +STG + G + I G + +V +
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612
Query: 241 AKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP-N 295
++G + DA + + + W ++L+ C H LG+ + EK+L I P +
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA---EKILE--IEPQD 667
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ T++ + + AG LD+ AL++K
Sbjct: 668 ETTYVLLSNMYAAAGSLDQ----VALLRK 692
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/555 (42%), Positives = 355/555 (63%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + ND + +++ Y+K G +DEA L D+ +W A++ GY ++++
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ FS M +G+ ++ TL++ +KASG + K G+Q+ A+ +K G++ +++V S
Sbjct: 1080 SRKALEHFSLMHEMGIPIDEITLATAIKASGC-LINLKQGKQIQAYAIKLGFNNDLWVSS 1138
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LDMY + M +A LF + +EV+W +I+G+ + + AL + M G +P
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQP 1198
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++++++ A + +LEQGK +HA+V+K L FVG +LVDMY K GS++DA +VF
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++ R VV WN+ML G AQHG + F M NGI P++VTF+ VL+ACSH+GL
Sbjct: 1259 RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFS 1318
Query: 314 EGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E YF A+ K +G+ PE HY VD LGRAG + A I MP + +A+++ ALLGA
Sbjct: 1319 EAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGA 1378
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR + E A+++ LDP DS ++LL+NIYA++ + +D AR MMK VKK+P
Sbjct: 1379 CRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDP 1438
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG-YVPDSSHVLSYADQQER 491
SW++ KN VH+FV +D +HPQ ++I++K ++ ++I++ G YVPD+ L +++E+
Sbjct: 1439 GFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEK 1498
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E L HSEKLA+AF LISTPP +TI + KN+RVCGDCHSA K SK+ +REI++RD NR
Sbjct: 1499 ERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANR 1558
Query: 552 FHHFRDGFCSCGDYW 566
FHHFR+G CSCGDYW
Sbjct: 1559 FHHFRNGTCSCGDYW 1573
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 198/369 (53%), Gaps = 3/369 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ S+F + + N+++N Y+K G + A K F P D+++W +IS Y+QN+
Sbjct: 916 IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNL 975
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCLKYGYDWNVYV 131
AI F +LR GLKP+QFTL+SVL+A G + F G QVH + +K G + +V
Sbjct: 976 EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++L+D+Y++ +MD+A FL + SWNA++ G+ + ++ KAL FS M G
Sbjct: 1036 STALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+ ++ A +L+QGK + A+ IK G +V + ++DMY K G + +A +
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F + + D V+W +M++G ++G + + M +G+ P++ TF ++ A S
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L++G+ A + K + + VD+ + G + A + R+M + W A+L
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV-VFWNAMLL 1274
Query: 372 ACRMHKNVE 380
H +V+
Sbjct: 1275 GLAQHGHVD 1283
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 168/369 (45%), Gaps = 42/369 (11%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ VH + + F+ D+ + ++N Y K G + +AR LFD+MP +D V W ++ Y +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAFCLKYGYDWN 128
N + A+ FS R G P+ L V+ + ++++ QV A+ +K
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK------ 849
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
M+ FDQ N +WN + + A+ F +LR
Sbjct: 850 ---------MFP-FDQ------------GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
+ + +A L+ G+ +HA VIKS V V N+L++MY+K+G +
Sbjct: 888 STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYA 947
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
AEK F + D++SWN+M++ AQ+ L + F +LR+G+ P+Q T VL ACS
Sbjct: 948 AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007
Query: 309 AGLLDEGQGYFALMK-------KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
DEG+ YF L K G+ + +DL + G +D A +F+ +
Sbjct: 1008 G---DEGE-YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDF 1062
Query: 362 TAAVWGALL 370
A W A++
Sbjct: 1063 DLASWNAIM 1071
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 152/286 (53%), Gaps = 3/286 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L LK+ + + A+ + F ND+ + + +L+ Y KCG + A +LF E+ D V WT +
Sbjct: 1112 LINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTM 1171
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISGY +N ++A+ ++ M G++P+++T ++++KAS ++ G+Q+HA +K
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQ-GKQIHANVVKLD 1230
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
Y + +VG+SL+DMY + + DA+ +F ++ + V WNA++ G A+ ++AL F
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKS 243
M G +P ++ V +A + +G + + K+ G + LVD ++
Sbjct: 1291 TMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRA 1350
Query: 244 GSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
G I++AE V + K + ++L C G + R +K+L
Sbjct: 1351 GRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL 1396
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 176/389 (45%), Gaps = 33/389 (8%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+ LK + HA I+ S D + N ++ Y+KCG L AR++FD+ +D+VTW ++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 65 ISGYSQ--NDQPENAI---ILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ Y+Q + EN + LF + G + TL+ +LK + VH +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGF-VQVSETVHGY 742
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G++ +++V +L+++Y ++ + A LF + ++ V WN ++ + S ++A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR FS R GF P + V + S S + + HA +K+
Sbjct: 803 LRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKR--HAEQVKA--------------- 845
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA K+F ++ +WN LT G A + F+ +LR+ I + VT
Sbjct: 846 YAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ +L+A A LD G+ AL+ K P + +++ +AG++ A K P
Sbjct: 898 VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP- 956
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAER 388
E W ++ + N+E+ A R
Sbjct: 957 ELDLISWNTMI-SSYAQNNLEMEAICTFR 984
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
S D K G++ HA + G + Y+ ++L+ MY++ + A +F ++ V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 163 WNALIAGHAR--KSEGEKALRTFS--EMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWV 217
WN+++A +A+ S E L F +LRE GF T + + + +G ++ + V
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
H + +K G +L FV LV++Y K G + A +F+++ +RD V WN ML ++
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVL 303
+R+F R+G P+ CV+
Sbjct: 800 DEALRFFSAFHRSGFXPDFSNLHCVI 825
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/555 (42%), Positives = 355/555 (63%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + ND + +++ Y+K G +DEA L D+ +W A++ GY ++++
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ FS M +G+ ++ TL++ +KASG + K G+Q+ A+ +K G++ +++V S
Sbjct: 1080 SRKALEHFSLMHEMGIPIDEITLATAIKASGC-LINLKQGKQIQAYAIKLGFNNDLWVSS 1138
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LDMY + M +A LF + +EV+W +I+G+ + + AL + M G +P
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQP 1198
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++++++ A + +LEQGK +HA+V+K L FVG +LVDMY K GS++DA +VF
Sbjct: 1199 DEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVF 1258
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++ R VV WN+ML G AQHG + F M NGI P++VTF+ VL+ACSH+GL
Sbjct: 1259 RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFS 1318
Query: 314 EGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E YF A+ K +G+ PE HY VD LGRAG + A I MP + +A+++ ALLGA
Sbjct: 1319 EAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGA 1378
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR + E A+++ LDP DS ++LL+NIYA++ + +D AR MMK VKK+P
Sbjct: 1379 CRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDP 1438
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG-YVPDSSHVLSYADQQER 491
SW++ KN VH+FV +D +HPQ ++I++K ++ ++I++ G YVPD+ L +++E+
Sbjct: 1439 GFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEK 1498
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E L HSEKLA+AF LISTPP +TI + KN+RVCGDCHSA K SK+ +REI++RD NR
Sbjct: 1499 ERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANR 1558
Query: 552 FHHFRDGFCSCGDYW 566
FHHFR+G CSCGDYW
Sbjct: 1559 FHHFRNGTCSCGDYW 1573
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 198/369 (53%), Gaps = 3/369 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ S+F + + N+++N Y+K G + A K F P D+++W +IS Y+QN+
Sbjct: 916 IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNL 975
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCLKYGYDWNVYV 131
AI F +LR GLKP+QFTL+SVL+A G + F G QVH + +K G + +V
Sbjct: 976 EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++L+D+Y++ +MD+A FL + SWNA++ G+ + ++ KAL FS M G
Sbjct: 1036 STALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+ ++ A +L+QGK + A+ IK G +V + ++DMY K G + +A +
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F + + D V+W +M++G ++G + + M +G+ P++ TF ++ A S
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L++G+ A + K + + VD+ + G + A + R+M + W A+L
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKV-VFWNAMLL 1274
Query: 372 ACRMHKNVE 380
H +V+
Sbjct: 1275 GLAQHGHVD 1283
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 152/286 (53%), Gaps = 3/286 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L LK+ + + A+ + F ND+ + + +L+ Y KCG + A +LF E+ D V WT +
Sbjct: 1112 LINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTM 1171
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISGY +N ++A+ ++ M G++P+++T ++++KAS ++ G+Q+HA +K
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQ-GKQIHANVVKLD 1230
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
Y + +VG+SL+DMY + + DA+ +F ++ + V WNA++ G A+ ++AL F
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKS 243
M G +P ++ V +A + +G + + K+ G + LVD ++
Sbjct: 1291 TMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRA 1350
Query: 244 GSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
G I++AE V + K + ++L C G + R +K+L
Sbjct: 1351 GRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL 1396
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 168/369 (45%), Gaps = 42/369 (11%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ VH + + F+ D+ + ++N Y K G + +AR LFD+MP +D V W ++ Y +
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAFCLKYGYDWN 128
N + A+ FS R G P+ L V+ + ++++ QV A+ +K
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK------ 849
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
M+ FDQ N +WN + + A+ F +LR
Sbjct: 850 ---------MFP-FDQ------------GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
+ + +A L+ G+ +HA VIKS V V N+L++MY+K+G +
Sbjct: 888 STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYA 947
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
AEK F + D++SWN+M++ AQ+ L + F +LR+G+ P+Q T VL ACS
Sbjct: 948 AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007
Query: 309 AGLLDEGQGYFALMK-------KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
DEG+ YF L K G+ + +DL + G +D A +F+ +
Sbjct: 1008 G---DEGE-YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDF 1062
Query: 362 TAAVWGALL 370
A W A++
Sbjct: 1063 DLASWNAIM 1071
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 176/389 (45%), Gaps = 33/389 (8%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+ LK + HA I+ S D + N ++ Y+KCG L AR++FD+ +D+VTW ++
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 65 ISGYSQ--NDQPENAI---ILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ Y+Q + EN + LF + G + TL+ +LK + VH +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGF-VQVSETVHGY 742
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G++ +++V +L+++Y ++ + A LF + ++ V WN ++ + S ++A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR FS R GF P + V + S S + + HA +K+
Sbjct: 803 LRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKR--HAEQVKA--------------- 845
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA K+F ++ +WN LT G A + F+ +LR+ I + VT
Sbjct: 846 YAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ +L+A A LD G+ AL+ K P + +++ +AG++ A K P
Sbjct: 898 VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP- 956
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAER 388
E W ++ + N+E+ A R
Sbjct: 957 ELDLISWNTMI-SSYAQNNLEMEAICTFR 984
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
S D K G++ HA + G + Y+ ++L+ MY++ + A +F ++ V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 163 WNALIAGHAR--KSEGEKALRTFS--EMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWV 217
WN+++A +A+ S E L F +LRE GF T + + + +G ++ + V
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
H + +K G +L FV LV++Y K G + A +F+++ +RD V WN ML ++
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVL 303
+R+F R+G P+ CV+
Sbjct: 800 DEALRFFSAFHRSGFFPDFSNLHCVI 825
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 353/566 (62%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +ARI+ +I F+ D+ + +++ YAKCGC++ AR++FD M K++++W
Sbjct: 141 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ Y + Q A+ LF ML G+ P++ TL+S+L A + + + GR +H
Sbjct: 201 SAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC-SDLKNLQMGRLIHHIVY 259
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+G D + +V ++L+DMY + +++DA FLF + ++ V+W +I G+A ++L
Sbjct: 260 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 319
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M EG P + +V A A G++ + + + ++ + QL +G ++DM+A
Sbjct: 320 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 379
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E A ++F+R+ +++V+SW++M+ HG G+ + F MLR+GI PN++T +
Sbjct: 380 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 439
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSHAGL++EG +F+LM + + V + HY VDLLGRAG LD ALK I M +E
Sbjct: 440 LLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVE 499
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+WGA LGACR HK+V L AA + EL P + G +ILL+NIYA+AGR D A+ R
Sbjct: 500 KDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTR 559
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M + +KK P +W+E N H F D HP+ I++ + + K++ +GYVPD++
Sbjct: 560 DLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTN 619
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++ + L HSEKLA+AF LI+TP + I I KN+RVCGDCH+ K S +
Sbjct: 620 FVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAIT 679
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHF++G CSCGDYW
Sbjct: 680 GRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 197/375 (52%), Gaps = 2/375 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L+ R++H + D + +++ Y KC +++AR LFD+M +D+VTW
Sbjct: 40 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTW 99
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I GY++ + +++LF +M G+ P++ + +V+ A K R + +
Sbjct: 100 TVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHK-ARIIDDYIQ 158
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + +V +G++++DMYA+ ++ A +F +E KN +SW+A+IA + +G KAL
Sbjct: 159 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 218
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML G P + +S+ A + +L+ G+ +H V K G L FV LVDMY
Sbjct: 219 LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG 278
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K IEDA +F+++ +RD+V+W M+ G A+ G ++ F+KM G+ P++V +
Sbjct: 279 KCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVT 338
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
V+ AC+ G + + + +++ + + +D+ + G ++ A + M E
Sbjct: 339 VVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EK 397
Query: 362 TAAVWGALLGACRMH 376
W A++ A H
Sbjct: 398 NVISWSAMIAAYGYH 412
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 167/309 (54%), Gaps = 2/309 (0%)
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
++ G+++ N F +++R G +P+ +TL V++A + + GR +H K+
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC-RDLKNLQMGRLIHHIVYKF 59
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G D + +V ++L+DMY + +++DA FLF ++ ++ V+W +I G+A + ++L F
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M EG P + +V A A G++ + + + ++ + QL +G ++DMYAK
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G +E A ++F+R+ +++V+SW++M+ HG G+ + F ML +G+ P+++T +L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACS L G+ ++ K G++ + VD+ G+ ++ A +MP E
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDL 298
Query: 364 AVWGALLGA 372
W ++G
Sbjct: 299 VTWTVMIGG 307
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/566 (41%), Positives = 360/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + + HA IL K D+ N ++N Y+KCG +D AR++FDEMP + +V+W
Sbjct: 74 CAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSW 133
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I +QN + A+ L QM R G ++FT+SSVL A A + + +HAF +
Sbjct: 134 NTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE-CQLLHAFAI 192
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D NV+V ++LLD+YA+ M DA +F ++ ++ V+W+++ AG+ + E+AL
Sbjct: 193 KAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALA 252
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + G + F SSV A A ++ +GK ++A + KSG FV ++L+DMYA
Sbjct: 253 LFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYA 312
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IE++ KVF + KR+VV WN+M++G ++H + FEKM + G++PN VTF+
Sbjct: 313 KCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVS 372
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC H GL+ +GQ YF LM K+H + P HY VD L RAG + A I ++P
Sbjct: 373 VLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFN 432
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+A++WG+LL +CR H N+EL AA+++F+++PH+SG ++LL+N+YA+ G+ ++ A+ R
Sbjct: 433 ASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMR 492
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K++KES VKKE SW+E K+ VH+F+ + HP+ I+ K E+ ++++++GY ++
Sbjct: 493 KLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQ 552
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
H L + ++ L+ HSEKLA L+ PP + I I KN+R+CGDCHS K ASK
Sbjct: 553 HDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFF 612
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R++IVRDTNRFHHF++G CSCGD+W
Sbjct: 613 CRDVIVRDTNRFHHFKNGCCSCGDFW 638
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/596 (40%), Positives = 369/596 (61%), Gaps = 37/596 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNT-----ILNAYAKCGCLDEARKLFDEMPVK 56
C+HL++L + +HA++L +N+ ++N+ +++ Y C ++ R++FD + +
Sbjct: 307 CSHLERLDVGKEIHAYVL----RNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 362
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKAS-GAGATDDKFGR 114
+ W A+ISGY++N E A+ILF +M+++ GL PN T++SV+ A A +K
Sbjct: 363 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNK--E 420
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+H + +K G+ + YV ++L+DMY+R +MD + +F ++E ++ VSWN +I G+
Sbjct: 421 SIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSG 480
Query: 175 EGEKALRTFSEMLRE-----------------GFEPTHFSYSSVFTALASTGSLEQGKWV 217
AL EM R ++P + +V A+ ++ +GK +
Sbjct: 481 RYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI 540
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
HA+ I++ VG+ LVDMYAK G + + +VFN + ++V++WN ++ C HG G
Sbjct: 541 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 600
Query: 278 KATVRWFEKML----RNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
+ + F+ M+ R G A PN+VTF+ V ACSH+GL+ EG F MK HGVEP
Sbjct: 601 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTS 660
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY VDLLGRAG L+ A + + MP E W +LLGACR+H+NVELG AA+ +
Sbjct: 661 DHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLL 720
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
L+P+ + ++LL+NIY+SAG N A RK M++ GVKKEP CSW+E ++ VH F+A D
Sbjct: 721 HLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGD 780
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
+HPQ +H +SEK+++ GYVPD+S VL D+ E+E L HSEKLA+AF +++
Sbjct: 781 VSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILN 840
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TPPG+TI + KN+RVC DCH+A KF SK++EREIIVRD RFHHF++G CSCGDYW
Sbjct: 841 TPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 190/371 (51%), Gaps = 7/371 (1%)
Query: 5 LKKLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L+ LK +HA + + + + + NT++N Y KCG + + K+FD + +D V+W +
Sbjct: 105 LQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNS 164
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV-LKASGAGATDD-KFGRQVHAFCL 121
I+ + ++ E A+ F M ++ + FTL SV L S G + G+Q+H + L
Sbjct: 165 FIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSL 224
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D + ++L+ MYA+ ++DD+ LF + ++ VSWN +I+ ++ +AL
Sbjct: 225 RVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALA 283
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMY 240
F M+ EG E + +SV A + L+ GK +HA+V+++ + +FVG+ LVDMY
Sbjct: 284 FFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMY 343
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTF 299
+E +VF+ +L R + WN+M++G A++GL + + F +M++ G+ PN T
Sbjct: 344 CNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM 403
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
V+ AC H + K G + + +D+ R G +D + M +
Sbjct: 404 ASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEV 463
Query: 360 EPTAAVWGALL 370
+ W ++
Sbjct: 464 RDRVS-WNTMI 473
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 181/366 (49%), Gaps = 21/366 (5%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
N ++ YAK G +D+++ LF+ +DMV+W +IS +SQ+D+ A+ F M+ G+
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG-YDWNVYVGSSLLDMYARFDQMDDA 148
+ + T++SVL A D G+++HA+ L+ N +VGS+L+DMY Q++
Sbjct: 294 ELDGVTIASVLPACSHLERLD-VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALAS 207
+F + + WNA+I+G+AR EKAL F EM++ G P + +SV A
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
+ + +H + +K G + +V N L+DMY++ G ++ +E +F+ + RD VSWN+M
Sbjct: 413 CEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTM 472
Query: 268 LTGCAQHGLGKATVRWFEKMLR-----------------NGIAPNQVTFLCVLTACSHAG 310
+TG G + +M R PN +T + VL C+
Sbjct: 473 ITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALA 532
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ +G+ A ++ + + VD+ + G L+ + + EMP W L+
Sbjct: 533 AIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLI 591
Query: 371 GACRMH 376
AC MH
Sbjct: 592 MACGMH 597
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 143/267 (53%), Gaps = 6/267 (2%)
Query: 54 PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 113
P + +W + ++++ AI + +M G +P+ F +VLKA +G D K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAV-SGLQDLKTG 111
Query: 114 RQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
Q+HA +K+GY +V V ++L++MY + + D +F + +++VSWN+ IA R
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG---SLEQGKWVHAHVIKSGGQLV 229
+ E+AL F M E E + F+ SV A ++ G L GK +H + ++ G Q
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ-K 230
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
F N L+ MYAK G ++D++ +F + RD+VSWN+M++ +Q + +F M+
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQ 316
G+ + VT VL ACSH LD G+
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGK 317
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/568 (42%), Positives = 352/568 (61%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C ++K+L AR +H+ +L F + + +++AY+K G L A +F M +++V+
Sbjct: 316 CANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVS 375
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I+G QN A LFS+M G+ PN FT S++L AS A Q+HA
Sbjct: 376 WTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA-----SLPPQIHAQV 430
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ VG++LL Y++ ++A +F ++ K+ VSW+A++ +A+ + + A
Sbjct: 431 IKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGAT 490
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M G +P F+ SSV A AS T ++ G+ HA IK V + LV M
Sbjct: 491 NIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSM 550
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ GSIE A+ +F R RD+VSWNSML+G AQHG + + F +M GI + VTF
Sbjct: 551 YARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTF 610
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L V+ C+HAGL++EGQ YF ++ + +G+ P HY VDL RAG LD A+ I M
Sbjct: 611 LSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMS 670
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
VW LLGAC++HKNVELG AAE++ L+P DS ++LL+NIY++AG+ +
Sbjct: 671 FPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDE 730
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M VKKE CSW++ KN VH F+A+D +HP I+ K R ++ K+KQ GY PD
Sbjct: 731 VRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPD 790
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S L ++++EA L +HSE+LALAF LI+TPPG+ +HI KN+RVCGDCH+ K SK
Sbjct: 791 TSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSK 850
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REI++RD +RFHHF G CSCGD+W
Sbjct: 851 IEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 159/283 (56%), Gaps = 2/283 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ + ++++ Y K + + RK+F+ MP +++VTWT+L++GY Q+ + + LF +
Sbjct: 136 RGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFR 195
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M G+ PN T +SVL + D GR+VHA +K+G V+V +SL++MYA+
Sbjct: 196 MRAEGVWPNSVTFASVLSVVASQGMVD-LGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCG 254
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+++A +F +E+++ VSWN L+AG +AL+ F + T +Y++V
Sbjct: 255 LVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIK 314
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL-KRDVV 262
A+ L + +H+ V+K G V L+D Y+K+G + +A +F + ++VV
Sbjct: 315 LCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVV 374
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
SW +M+ GC Q+G F +M +G+APN T+ +LTA
Sbjct: 375 SWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 176/368 (47%), Gaps = 7/368 (1%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASG 104
AR+ FDE+P ++ T + +++ A+ F + R G + L VLK G
Sbjct: 57 ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 105 AGATDDKFGRQVHAFCLKYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSW 163
+ D G+Q+H C++ G+D +V VG+SL+DMY ++ + D +F A+ +N V+W
Sbjct: 115 S-VPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+L+ G+ + + F M EG P +++SV + +AS G ++ G+ VHA +K
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G FV N+L++MYAK G +E+A VF + RD+VSWN+++ G +G ++
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F + Q T+ V+ C++ L + + + K G +D +
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK 353
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHI 401
AG L AL M W A++ C + +V L A R+ E + P+D
Sbjct: 354 AGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYST 413
Query: 402 LLANIYAS 409
+L AS
Sbjct: 414 ILTASVAS 421
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/567 (40%), Positives = 358/567 (63%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ K L+ +++H+HI +D+ + N +++ YA+CG L +AR+LF MP +D+++W
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY++ + A+ L+ QM G+KP + T +L A A ++ G+ +H L
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC-ANSSAYADGKMIHEDIL 458
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N ++ ++L++MY R + +A +F ++++ +SWN++IAGHA+ E A +
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM E EP + +++SV + + +LE GK +H + +SG QL +GN L++MY
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI-APNQVTFL 300
+ GS++DA VF+ L RDV+SW +M+ GCA G + F +M G P+ TF
Sbjct: 579 RCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFT 638
Query: 301 CVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L+AC+HAGL+ EG F+ M+ ++GV P HY V LLGRA A I +MP
Sbjct: 639 SILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPF 698
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
P AAVW LLGACR+H N+ L +AA +L+ + +ILL+N+YA+AGR +D A+
Sbjct: 699 PPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKI 758
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R++M+ G++KEP SW+E N +H F+A D +HP+ A I+ + + +S ++++ GY PD+
Sbjct: 759 RRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDT 818
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
HVL + +E L HSE+LA+A+ LI TPPG+ I I KN+R+CGDCH+A KF SK+
Sbjct: 819 QHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKL 878
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REII RD+NRFH F++G CSC DYW
Sbjct: 879 VGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 194/372 (52%), Gaps = 2/372 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
CT + L EA+ +HA ++ + DI + N ++N Y KC + +A ++F EMP +D+++
Sbjct: 36 NCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVIS 95
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W +LIS Y+Q + A LF +M G PN+ T S+L A + A + G+++H+
Sbjct: 96 WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN-GKKIHSQI 154
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K GY + V +SLL MY + + A +F + ++ VS+N ++ +A+K+ ++ L
Sbjct: 155 IKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECL 214
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M EG P +Y ++ A + L++GK +H ++ G VG LV M
Sbjct: 215 GLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMC 274
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G ++ A++ F + RDVV +N+++ AQHG + +M +G+A N+ T+L
Sbjct: 275 VRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYL 334
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS + L+ G+ + + + G + + + R G L +A + MP
Sbjct: 335 SILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR 394
Query: 361 PTAAVWGALLGA 372
+ W A++
Sbjct: 395 DLIS-WNAIIAG 405
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 221/450 (49%), Gaps = 36/450 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ + +H+ I+ + ++ D +QN++L+ Y KCG L AR++F + +D+V++
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ Y+Q + + LF QM G+ P++ T ++L A + D+ G+++H +
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE-GKRIHKLTV 256
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + ++ VG++L+ M R +D A F + ++ V +NALIA A+ +A
Sbjct: 257 EEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFE 316
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ M +G +Y S+ A +++ +LE GK +H+H+ + G +GN L+ MYA
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G + A ++F + KRD++SWN+++ G A+ +R +++M G+ P +VTFL
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL-------------- 347
+L+AC+++ +G+ + + G++ +++ R G L
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 348 -----------------DRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAE 387
+ A K +EM +EP + ++L C+ + +ELG
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 388 RIFELDPH-DSGPHILLANIYASAGRLNDA 416
RI E D L N+Y G L DA
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDA 586
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 147/268 (54%), Gaps = 2/268 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++HA ++ G ++++ + L++MY + + DA +F + ++ +SWN+LI+ +A++
Sbjct: 47 KRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ 106
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+KA + F EM GF P +Y S+ TA S LE GK +H+ +IK+G Q V
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L+ MY K G + A +VF + RDVVS+N+ML AQ K + F +M GI+
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P++VT++ +L A + +LDEG+ L + G+ + V + R G +D A +
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286
Query: 354 IREMPIEPTAAVWGALLGACRMH-KNVE 380
+ + + V+ AL+ A H NVE
Sbjct: 287 FKGIA-DRDVVVYNALIAALAQHGHNVE 313
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
E +Y ++ L + K +HA ++++G F+ N L++MY K S+ DA +
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF + +RDV+SWNS+++ AQ G K + FE+M G PN++T++ +LTAC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALL 370
L+ G+ + + K G + + + + + G+ G L RA + I P V + +L
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNTML 201
Query: 371 G--ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
G A + + LG + + P D +I L + + + L++ R K+ E G+
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260
Query: 429 KKE 431
+
Sbjct: 261 NSD 263
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/566 (40%), Positives = 359/566 (63%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E R VHAH++ + ++ + + ++ Y +CG LD+AR + D MP +++V+W
Sbjct: 51 CVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSW 110
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGYSQ+ + A+ LF +MLR G K N+FTL++VL + + + QVH+ +
Sbjct: 111 TAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV-EQVHSLVV 169
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ +++VGSSLLDMY + + +A +F L ++ VS A+I+G+A+ ++AL
Sbjct: 170 KTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALD 229
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ G + + +++++ T+L+ SL GK VH +++ + N+L+DMY+
Sbjct: 230 LFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYS 289
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + + +VF+ + +R +SWN+ML G +HG+G+ V+ F M + P+ VT L
Sbjct: 290 KCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLA 348
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ CSH GL+DEG F L+ K+ HY +DLLGR+G L +AL I MP E
Sbjct: 349 VLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFE 408
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT A+WG+LLGACR+H NV +G A+++ +++P ++G +++L+NIYA+AG D R R
Sbjct: 409 PTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVR 468
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M E+ V KEPA SW+ +H F +++ HP++ I+ K +E+ +K G+VPD S
Sbjct: 469 KLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLS 528
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D +++E L HSEKLA+ F L++TPPG TI + KN+R+C DCH+ KF SKV
Sbjct: 529 CVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVY 588
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI +RD NRFH +DG C+CGDYW
Sbjct: 589 GREISLRDKNRFHLLKDGACTCGDYW 614
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%)
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
S + G + Y + TA +L +G+ VHAH++K+ + ++ L+ +Y +
Sbjct: 30 SSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC 89
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G+++DA V + + +R+VVSW +M++G +Q G + F +MLR G N+ T VL
Sbjct: 90 GALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVL 149
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
T+C + + + +L+ K E + +D+ G++G + A K +P T
Sbjct: 150 TSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTV 209
Query: 364 AVWGALLGACRM 375
+ + G ++
Sbjct: 210 SCTAIISGYAQL 221
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/567 (42%), Positives = 354/567 (62%), Gaps = 31/567 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH L S ++ D+ + +L+ Y K G +D+AR F+E+P KD++ W
Sbjct: 250 CLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPW 309
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+ Y+Q+DQ + A+ +F QM + + PNQFT +SVL+A A G Q+H +
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQAC-ATMEGLNLGNQIHCHVI 368
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEKAL 180
K G +V+V ++L+D+YA+ +M+++ LF +N+V+ WN +I GH + +GEKAL
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKAL 428
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F ML + T +YSS A AS +LE G +H+ +K+ V N L+DMY
Sbjct: 429 RLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMY 488
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK GSI+DA VF+ + K+D VSWN+M++G + HGL
Sbjct: 489 AKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL------------------------ 524
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
AC++AGLLD+GQ YF ++++ HG+EP HY V LLGR G LD+A+K I E+P
Sbjct: 525 ----ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPF 580
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P+ VW ALLGAC +H ++ELG +A+ + E++P D H+LL+N+YA+A R ++ A
Sbjct: 581 QPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASV 640
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK MK GVKKEP SW+E++ VH F D +HP+ +I+ + K K+ GY+P+
Sbjct: 641 RKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNY 700
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ VL + +E+E L VHSE+LAL+F +I TP GS I I KN+R+C DCH+A K SKV
Sbjct: 701 NVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKV 760
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REI+VRD NRFHHF++G CSCGDYW
Sbjct: 761 VQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 189/369 (51%), Gaps = 1/369 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + +H IL D+ N +LN Y K L +A KLFDEMP ++ +++
Sbjct: 48 CIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISF 107
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI GY+++ + AI LF ++ R G + N F +++LK + G +HA
Sbjct: 108 VTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLL-VSMDCGELGWGIHACIF 166
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G++ N +VG++L+D Y+ ++D A +F + K+ VSW ++ A ++AL+
Sbjct: 167 KLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALK 226
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M GF+P +F+++SVF A + + GK VH +KS +L +VG L+D+Y
Sbjct: 227 LFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYT 286
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG I+DA F + K+DV+ W+ M+ AQ K V F +M + + PNQ TF
Sbjct: 287 KSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFAS 346
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL AC+ L+ G + K G+ + +D+ + G ++ ++ E P
Sbjct: 347 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRN 406
Query: 362 TAAVWGALL 370
W ++
Sbjct: 407 DVTPWNTVI 415
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/566 (40%), Positives = 362/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + L+ R +H I+ S + D+ + N ++N Y +CG L +A ++F + +++++W
Sbjct: 597 CKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSW 656
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G++ + A LF QM G KP + T SS+LKA + A D+ G++V A L
Sbjct: 657 TAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDE-GKKVIAHIL 715
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY+ + VG++L+ Y++ M DA +F + +++ +SWN +IAG+A+ G AL+
Sbjct: 716 NSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQ 775
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M +G FS+ S+ A +S +LE+GK VHA ++K Q VG L+ MYA
Sbjct: 776 FAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYA 835
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E+A++VF+ +++VV+WN+M+ AQHGL + +F M + GI P+ TF
Sbjct: 836 KCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTS 895
Query: 302 VLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+AC+H+GL+ EG F+ L +HG+ P HY V LLGRAG A I +MP
Sbjct: 896 ILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFP 955
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AAVW LLGACR+H NV L +AA +L+ + ++LL+N+YA+AGR +D A+ R
Sbjct: 956 PDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIR 1015
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M+ G++KEP SW+E N +H F+A D +HP+ A I+++ + +S ++++ GY PD+
Sbjct: 1016 RVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQ 1075
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+VL D++ +E L HSE+LA+A+ L+ TPPG+ I I KN+R+CGDCH+A KF SK+V
Sbjct: 1076 YVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLV 1135
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII RD+NRFH F++G CSC D+W
Sbjct: 1136 GREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 203/358 (56%), Gaps = 3/358 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ K L ++H+HI +D+ + N++++ YA+CG L AR+LF+ MP +D+++W
Sbjct: 395 CSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISW 454
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I+GY++ + A+ L+ QM G+KP + T +L A + + A D G+ +H
Sbjct: 455 NAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSD--GKMIHEDI 512
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L+ G N ++ ++L++MY R + +A +F +++ +SWN++IAGHA+ E A
Sbjct: 513 LRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAY 572
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F EM +EG EP +++SV + +LE G+ +H +I+SG QL +GN L++MY
Sbjct: 573 KLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMY 632
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ GS++DA +VF+ L R+V+SW +M+ G A G + F +M +G P + TF
Sbjct: 633 IRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFS 692
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+L AC + LDEG+ A + G E + + ++G + A K +MP
Sbjct: 693 SILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 195/369 (52%), Gaps = 2/369 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L EA+ +HA ++ + DI + N ++N Y KC + +A ++F +MP +D+++W
Sbjct: 92 CTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISW 151
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LIS Y+Q + A LF +M G P++ T S+L A + A + ++G+++H+ +
Sbjct: 152 NSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA-ELEYGKKIHSKII 210
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ GY + V +SLL+MY + + + A +F+ + ++ VS+N ++ +A+K+ E+ +
Sbjct: 211 EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIG 270
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M EG P +Y ++ A + L++GK +H + G VG L M+
Sbjct: 271 LFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFV 330
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G + A++ RDVV +N+++ AQHG + + +M +G+ N+ T+L
Sbjct: 331 RCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLS 390
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL ACS + L G+ + + + G + + + + R G L RA + MP
Sbjct: 391 VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRD 450
Query: 362 TAAVWGALL 370
+ W A++
Sbjct: 451 LIS-WNAII 458
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 218/450 (48%), Gaps = 36/450 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ + +H+ I+ + ++ D +QN++LN Y KC L AR++F + +D+V++
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSY 252
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ Y+Q E I LF QM G+ P++ T ++L A + D+ G+++H +
Sbjct: 253 NTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE-GKRIHKLAV 311
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + ++ VG++L M+ R + A A ++ V +NALIA A+ E+A
Sbjct: 312 NEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFE 371
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M +G +Y SV A +++ +L G+ +H+H+ + G +GN+L+ MYA
Sbjct: 372 QYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA 431
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G + A ++FN + KRD++SWN+++ G A+ ++ +++M G+ P +VTFL
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLH 491
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL-------------- 347
+L+AC+++ +G+ + + G++ +++ R G +
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARD 551
Query: 348 -----------------DRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAE 387
+ A K EM +EP + ++L C+ + +ELG
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611
Query: 388 RIFELDPH-DSGPHILLANIYASAGRLNDA 416
I E D L N+Y G L DA
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDA 641
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 145/267 (54%), Gaps = 1/267 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++HA ++ G ++++ + L++MY + + DA +F + ++ +SWN+LI+ +A++
Sbjct: 102 KRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQ 161
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+KA + F EM GF P+ +Y S+ TA S LE GK +H+ +I++G Q V
Sbjct: 162 GFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQ 221
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L++MY K + A +VF+ + +RDVVS+N+ML AQ + + F +M GI
Sbjct: 222 NSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIP 281
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P++VT++ +L A + +LDEG+ L G+ + + R G + A +
Sbjct: 282 PDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQA 341
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVE 380
+ E + V+ AL+ A H + E
Sbjct: 342 L-EAFADRDVVVYNALIAALAQHGHYE 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
E +Y + SL + K +HA ++++G F+ N L++MY K S+ DA +
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF ++ +RDV+SWNS+++ AQ G K + FE+M G P+++T++ +LTAC
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L+ G+ + + + G + + + +++ G+ L A + + + + +LG
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVS-YNTMLG 257
Query: 372 ACRMHKNVE-----LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
VE G ++E I P D +I L + + + L++ R K+
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGI----PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE 313
Query: 427 GVKKE 431
G+ +
Sbjct: 314 GLNSD 318
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 357/566 (63%), Gaps = 7/566 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + E ++ H+ + + + + N ++N Y K L++A +LFD+MP +++++W
Sbjct: 71 CISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISW 130
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +IS YS+ + A+ L MLR ++PN +T SSVL+ S G +D R +H +
Sbjct: 131 TTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCNGMSD---VRMLHCGII 186
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +V+V S+L+D++A+ + +DA +F + + + + WN++I G A+ S + AL
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M R GF + +SV A LE G H H++K L+ + N LVDMY
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYC 304
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VFN++ +RDV++W++M++G AQ+G + ++ FE+M +G PN +T +
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVG 364
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSHAGLL++G YF MKK +G++P HY +DLLG+AG LD A+K + EM E
Sbjct: 365 VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A W LLGACR+ +N+ L YAA+++ LDP D+G + LL+NIYA++ + + R
Sbjct: 425 PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIR 484
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
M++ G+KKEP CSW+E +H F+ D++HPQ + KK ++ ++ IGYVP+++
Sbjct: 485 TRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETN 544
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + ++ E L+ HSEKLALAF L++ P I I+KN+R+CGDCH K ASK+
Sbjct: 545 FVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLE 604
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R I++RD R+HHF+DG CSCGDYW
Sbjct: 605 IRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A++ + G +YS + S ++ +G + H+ +G + + F+ N L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+MY K + DA ++F+++ +R+V+SW +M++ ++ + + + MLR+ + PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T+ VL +C+ G+ D + ++K+ G+E + +D+ + G + AL EM
Sbjct: 164 TYSSVLRSCN--GMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 358 PIEPTAAVWGALLG-----------------------------------ACRMHKNVELG 382
+ A VW +++G AC +ELG
Sbjct: 221 -VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A I + D D + L ++Y G L DA R MKE V
Sbjct: 280 MQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/563 (42%), Positives = 348/563 (61%), Gaps = 3/563 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
LK L+ R +H + + F+ + + +L+ Y KCG + AR +F M +++V+W +
Sbjct: 256 LKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTM 315
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY+QN + E A F +ML G++P ++ L A A D + GR VH +
Sbjct: 316 IDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHAC-ANLGDLERGRYVHRLLDEKK 374
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++V V +SL+ MY++ ++D A +F L+ K V+WNA+I G+A+ +AL F
Sbjct: 375 IGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFC 434
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM +P F+ SV TALA Q KW+H I++ FV L+D +AK G
Sbjct: 435 EMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCG 494
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+I+ A K+F+ + +R V++WN+M+ G +G G+ + F +M + PN++TFL V+
Sbjct: 495 AIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIA 554
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+GL++EG YF MK+ +G+EP HY VDLLGRAG LD A KFI++MP++P
Sbjct: 555 ACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGI 614
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
V GA+LGACR+HKNVELG A+ +F+LDP D G H+LLAN+YASA + AR R M
Sbjct: 615 TVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAM 674
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
++ G++K P CS VE +N VH F + HPQ I+ + +++K GYVPD++ +
Sbjct: 675 EKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSIH 734
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
++ +E L HSE+LA+AF L++T G+ IHI+KN+RVCGDCH A K+ S V RE
Sbjct: 735 D-VEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGRE 793
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
IIVRD RFHHF++G CSCGDYW
Sbjct: 794 IIVRDLRRFHHFKNGICSCGDYW 816
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 192/369 (52%), Gaps = 5/369 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT LK+L + + I+ + F N+ Q +++ + K + EA ++F+ + K V +
Sbjct: 54 CTSLKELHQ---ILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLY 110
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ GY++N +A+ + +M + P + + +L+ SG D + GR++H +
Sbjct: 111 HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGEN-LDLRRGREIHGMVI 169
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ N++ ++++++YA+ Q++DA+ +F + ++ VSWN ++AG+A+ +A++
Sbjct: 170 TNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQ 229
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M G +P + SV A+A +L G+ +H + ++G + + V ++D Y
Sbjct: 230 VVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYF 289
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A VF + R+VVSWN+M+ G AQ+G + F KML G+ P V+ +
Sbjct: 290 KCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMG 349
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L AC++ G L+ G+ L+ + + + + + + + + +D A +
Sbjct: 350 ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLK-HK 408
Query: 362 TAAVWGALL 370
T W A++
Sbjct: 409 TVVTWNAMI 417
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 145/275 (52%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L+ R VH + D+++ N++++ Y+KC +D A +F + K +VTW
Sbjct: 354 CANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTW 413
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY+QN A+ LF +M +KP+ FTL SV+ A A + + + +H +
Sbjct: 414 NAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITAL-ADLSVTRQAKWIHGLAI 472
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D NV+V ++L+D +A+ + A LF ++ ++ ++WNA+I G+ G +AL
Sbjct: 473 RTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALD 532
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
F+EM +P ++ SV A + +G +E+G + + ++ G + +VD+
Sbjct: 533 LFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLL 592
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G ++DA K + +K + +ML C H
Sbjct: 593 GRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIH 627
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F P+H L SL++ + +IK+G L+ ++ K SI +A
Sbjct: 37 FIPSHVYRHPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAA 96
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+VF + + V +++ML G A++ + VR++E+M + + P F +L
Sbjct: 97 RVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENL 156
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L G+ ++ +G + V+L + ++ A K MP
Sbjct: 157 DLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP 204
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/535 (43%), Positives = 343/535 (64%), Gaps = 2/535 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L+ YAKCG + +AR F+ +P D++ + +IS Y+Q++Q E A LF +++R + PN
Sbjct: 285 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 344
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+++LSSVL+A D FG+Q+H +K G++ +++VG++L+D YA+ + MD + +F
Sbjct: 345 EYSLSSVLQACTNMVQLD-FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 403
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
++L NEVSWN ++ G ++ GE+AL F EM T +YSSV A AST S+
Sbjct: 404 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 463
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+H + KS +GN+L+D YAK G I DA KVF L++RD++SWN++++G A
Sbjct: 464 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 523
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
HG + F++M ++ + N +TF+ +L+ C GL++ G F M+ HG++P
Sbjct: 524 LHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY V LLGRAG L+ AL+FI ++P P+A VW ALL +C +HKNV LG ++AE+I E
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 643
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
++P D ++LL+N+YA+AG L+ A RK M+ GV+K P SWVE K +H F
Sbjct: 644 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 703
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
HP +I+ ++ K + GY+PD + VL D++++ L VHSE+LALA+ L+ T
Sbjct: 704 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 763
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PPG I I KN+R C DCH+AF SK+V+REIIVRD NRFHHF DG CSCGDYW
Sbjct: 764 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 171/345 (49%), Gaps = 23/345 (6%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++AY+ C + +A +F+ + KD V WTA++S YS+ND PENA R +
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA-------FRCAQSCS 255
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+S + +H +K D +VG +LLDMYA+ + DA F
Sbjct: 256 LLAISCARQG-------------IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAF 302
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ + + + +I+ +A+ ++ E+A F ++R P +S SSV A + L+
Sbjct: 303 EMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLD 362
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
GK +H H IK G + FVGN L+D YAK ++ + K+F+ L + VSWN+++ G +
Sbjct: 363 FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFS 422
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEE 331
Q GLG+ + F +M + QVT+ VL AC S A + GQ + ++ +K +
Sbjct: 423 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI-EKSTFNNDT 481
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ +D + G + ALK + + +E W A++ +H
Sbjct: 482 VIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 525
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 22/358 (6%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C + R VH H++ G + D+ N +LN Y K G L AR+LFD MP ++MV
Sbjct: 69 CIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMV 128
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ L+ ++Q E A LF ++ G + NQF L+++LK + A G VH+
Sbjct: 129 SFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAG-GVHSC 187
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G+D N +VGS L+D Y+ + DA +F + K+ V W A+++ ++ E A
Sbjct: 188 AWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R +L + QG +H IK+ VG L+DM
Sbjct: 248 FRCAQS-----------------CSLLAISCARQG--IHGCAIKTLNDTEPHVGGALLDM 288
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+DA F + DV+ + M++ AQ + F +++R+ + PN+ +
Sbjct: 289 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 348
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
VL AC++ LD G+ K G E + +D + +D +LK +
Sbjct: 349 SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 165/329 (50%), Gaps = 16/329 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT++ +L + +H H + ++D+ + N +++ YAKC +D + K+F + + V+W
Sbjct: 355 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 414
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ G+SQ+ E A+ +F +M + Q T SSVL+A + A+ G Q+H
Sbjct: 415 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG-QIHCSIE 473
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ + +G+SL+D YA+ + DA +F L ++ +SWNA+I+G+A + AL
Sbjct: 474 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 533
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M + E ++ ++ + STG + G + I G + +V +
Sbjct: 534 LFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 593
Query: 241 AKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP-N 295
++G + DA + + + W ++L+ C H LG+ + EK+L I P +
Sbjct: 594 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA---EKILE--IEPQD 648
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ T++ + + AG LD+ AL++K
Sbjct: 649 ETTYVLLSNMYAAAGSLDQ----VALLRK 673
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 30/257 (11%)
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F+ + + G G+ VH HV++ G G+L F N L++MY K G + A ++F
Sbjct: 60 FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ---VTFLCVLTACSHAG 310
+R+ +R++VS+ +++ AQ G +A F ++ G NQ T L + A AG
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L G + K G + +D L+ A + + + A VW A++
Sbjct: 180 L---AGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA-EHVFNGIVRKDAVVWTAMV 235
Query: 371 ----------GACRMHKNVELGAYAAER-------IFELDPHDSGPHI--LLANIYASAG 411
A R ++ L A + R I L+ D+ PH+ L ++YA G
Sbjct: 236 SCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLN--DTEPHVGGALLDMYAKCG 293
Query: 412 RLNDAARARKMMKESGV 428
+ DA A +M+ V
Sbjct: 294 DIKDARLAFEMIPYDDV 310
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/571 (43%), Positives = 353/571 (61%), Gaps = 12/571 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIA--MQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
+C+ L R HA I+ + N + + N ++N Y+K + A+ L P + +
Sbjct: 20 QCSRL-----GRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSV 73
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
VTWTALI+G QN + +A+ FS M R ++PN FT KASG+ G+QVHA
Sbjct: 74 VTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS-LRSPLVGKQVHA 132
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G +V+VG S DMY++ ++A +F + +N +WNA ++ + +
Sbjct: 133 LAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDD 192
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F E +EG EPT F SSV +A A LE GK VH +K+ FVG+ LVD
Sbjct: 193 ALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVD 252
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML--RNGIAPNQ 296
MY K GSIEDAE+ F+ + +R++V+WN+M+ G A G V F++M + +APN
Sbjct: 253 MYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNY 312
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VTF+CVL+ACS AG ++ G F M+ ++G+EP HY VDLLGRAG++++A +FI+
Sbjct: 313 VTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIK 372
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+MPI PT +VWGALLGA +M ELG AA+ +FELDP DSG H+LL+N++A+AGR +
Sbjct: 373 KMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEE 432
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A RK MK+ G+KK CSW+ NAVH+F A D +H + + I ++ +++ GY
Sbjct: 433 ATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGY 492
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+PD+S L +++E+ ++ HSEK+ALAF LIS P G I I KN+R+CGDCHSA KF
Sbjct: 493 IPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKF 552
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S +V REIIVRD N FH FRD CSC DYW
Sbjct: 553 ISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/564 (41%), Positives = 362/564 (64%), Gaps = 6/564 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNT--ILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
++ + +HA+++ ++ + + T +L+ YAKCG L AR+LF+ + K +V+WTA+
Sbjct: 210 NMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAM 269
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKY 123
I+G ++++ E LF +M + PN+ T+ S++ G GA + G+Q+HA+ L+
Sbjct: 270 IAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGAL--QLGKQLHAYILRN 327
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ ++ + ++L+DMY + + +A LF + ++++ + W A+++ +A+ + ++A F
Sbjct: 328 GFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 387
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M G PT + S+ + A G+L+ GKWVH+++ K ++ + LVDMYAK
Sbjct: 388 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 447
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G I A ++F + RD+ WN+++TG A HG G+ + F +M R G+ PN +TF+ +L
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 507
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSHAGL+ EG+ F ++ G+ P+ HY VDLLGRAGLLD A + I+ MPI+P
Sbjct: 508 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
VWGAL+ ACR+HKN +LG AA ++ E++P + G ++L++NIYA+A R +DAA RK
Sbjct: 568 TIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKT 627
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK G+KKEP S +E VH F+ D +HPQ I++ E+ K+ + GYVPD+S V
Sbjct: 628 MKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTV 687
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D++E+E L HSEKLA+AF LIST P + I I KN+RVC DCH+A K SK+ R
Sbjct: 688 LLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGR 747
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
IIVRD NRFHHFR+G+CSCGDYW
Sbjct: 748 VIIVRDRNRFHHFREGYCSCGDYW 771
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 192/377 (50%), Gaps = 4/377 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + +H +L D+ + N ++ Y +C C++ AR +FD+M +D+V+W
Sbjct: 104 CGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I S+N + + A+ L +M + ++P++ + S++ A + + G+ +HA+ +
Sbjct: 164 STMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLF-ADTANMRMGKAMHAYVI 222
Query: 122 KYGYD--WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ + V ++LLDMYA+ + A LF L K VSW A+IAG R + E+
Sbjct: 223 RNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEG 282
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F M E P + S+ TG+L+ GK +HA+++++G + + LVDM
Sbjct: 283 TKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDM 342
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K I +A +F+ RDV+ W +ML+ AQ F++M +G+ P +VT
Sbjct: 343 YGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTI 402
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ +L+ C+ AG LD G+ + + K VE + VD+ + G ++ A + E I
Sbjct: 403 VSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AI 461
Query: 360 EPTAAVWGALLGACRMH 376
+W A++ MH
Sbjct: 462 SRDICMWNAIITGFAMH 478
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 179/348 (51%), Gaps = 18/348 (5%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L+ + +HA+IL + F +A+ +++ Y KC + AR LFD +D++
Sbjct: 307 ECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMI 366
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAF 119
WTA++S Y+Q + + A LF QM G++P + T+ S+L AGA D G+ VH++
Sbjct: 367 WTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALD--LGKWVHSY 424
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K + + + ++L+DMYA+ ++ A LF S++ WNA+I G A GE+A
Sbjct: 425 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLV 237
L F+EM R+G +P ++ + A + G + +GK + ++ + G LV + + +V
Sbjct: 485 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG-LVPQIEHYGCMV 543
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGK-ATVRWFEKMLRNGI 292
D+ ++G +++A ++ + +K + + W +++ C H LG+ A + E I
Sbjct: 544 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE------I 597
Query: 293 APNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
P + +++ + A + G MK G++ E H V V+
Sbjct: 598 EPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVN 645
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 164/363 (45%), Gaps = 38/363 (10%)
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
F SVLKA G + + G+++H F LK G D +V+VG++L+ MY ++ A +F
Sbjct: 94 NFMAPSVLKACGQ-VSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVF 152
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ ++ VSW+ +I +R E + AL EM P+ + S+ A T ++
Sbjct: 153 DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMR 212
Query: 213 QGKWVHAHVIKSGGQLVAFVGNT--LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
GK +HA+VI++ V T L+DMYAK G + A ++FN L ++ VVSW +M+ G
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
C + + + F +M I PN++T L ++ C G L G+ A + ++G
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332
Query: 331 EAHYVTFVDLLGR-------------------------------AGLLDRALKFIREM-- 357
A VD+ G+ A +D+A +M
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392
Query: 358 -PIEPTAAVWGALLGACRMHKNVELGAYAAERI-FELDPHDSGPHILLANIYASAGRLND 415
+ PT +LL C + ++LG + I E D + L ++YA G +N
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 452
Query: 416 AAR 418
A R
Sbjct: 453 AGR 455
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/566 (41%), Positives = 358/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + L+ + +H I S + D+ + N ++N Y +CG L +AR +F + +D+++W
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSW 601
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + + AI LF QM G +P + T SS+LK + A D+ G++V A+ L
Sbjct: 602 TAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDE-GKKVIAYIL 660
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY+ + VG++L+ Y++ M DA +F + S++ VSWN +IAG+A+ G+ A+
Sbjct: 661 NSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVE 720
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M + P FS+ S+ A +S +LE+GK VHA ++K Q VG L+ MYA
Sbjct: 721 FAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYA 780
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS +A++VF+ +++++VV+WN+M+ AQHGL + +F M + GI P+ TF
Sbjct: 781 KCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTS 840
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+AC+HAGL+ EG F+ M+ ++GV P HY V LLGRA A I +MP
Sbjct: 841 ILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFP 900
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AAVW LLGACR+H N+ L +AA +L+ + +ILL+N+YA+AGR +D A+ R
Sbjct: 901 PDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIR 960
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M+ G++KEP SW+E N +H F+A D +HP+ A I+ + + +S ++++ GY PD+
Sbjct: 961 RVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQ 1020
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
HVL + +E L HSE+LA+A+ LI TPPG+ I I KN+R+CGDCH+A KF SK+V
Sbjct: 1021 HVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLV 1080
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII RD+NRFH F++G CSC DYW
Sbjct: 1081 GREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 225/421 (53%), Gaps = 9/421 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ K L+ +++H+HI +D+ + N +++ YA+CG L +AR+LF MP +D+++W
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY++ + A+ L+ QM G+KP + T +L A A ++ G+ +H L
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC-ANSSAYADGKMIHEDIL 458
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N ++ ++L++MY R + +A +F ++++ +SWN++IAGHA+ E A +
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYK 518
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM E EP + +++SV + + +LE GK +H + +SG QL +GN L++MY
Sbjct: 519 LFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYI 578
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ GS++DA VF+ L RDV+SW +M+ GCA G + F +M G P + TF
Sbjct: 579 RCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSS 638
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L C+ + LDEG+ A + G E + + ++G + A + +MP
Sbjct: 639 ILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRD 698
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH----ILLANIYASAGRLNDAA 417
+ W ++ + LG A E +++ D P+ + L N +S L +
Sbjct: 699 IVS-WNKIIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGK 754
Query: 418 R 418
R
Sbjct: 755 R 755
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 193/371 (52%), Gaps = 2/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L EA+ +HA ++ + DI + N ++N Y KC + +A ++F EMP +D+++W
Sbjct: 37 CTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISW 96
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LIS Y+Q + A LF +M G PN+ T S+L A + A + G+++H+ +
Sbjct: 97 NSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN-GKKIHSQII 155
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GY + V +SLL MY + + A +F + ++ VS+N ++ +A+K+ ++ L
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M EG P +Y ++ A + L++GK +H ++ G VG LV M
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G ++ A++ F RDVV +N+++ AQHG + +M +G+A N+ T+L
Sbjct: 276 RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L ACS + L+ G+ + + + G + + + R G L +A + MP
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 362 TAAVWGALLGA 372
+ W A++
Sbjct: 396 LIS-WNAIIAG 405
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 220/450 (48%), Gaps = 36/450 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ + +H+ I+ + ++ D +QN++L+ Y KCG L AR++F + +D+V++
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ Y+Q + + LF QM G+ P++ T ++L A + D+ G+++H +
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE-GKRIHKLTV 256
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + ++ VG++L+ M R +D A F ++ V +NALIA A+ +A
Sbjct: 257 EEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFE 316
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ M +G +Y S+ A +++ +LE GK +H+H+ + G +GN L+ MYA
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G + A ++F + KRD++SWN+++ G A+ +R +++M G+ P +VTFL
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL-------------- 347
+L+AC+++ +G+ + + G++ +++ R G L
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 348 -----------------DRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAE 387
+ A K +EM +EP + ++L C+ + +ELG
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 388 RIFELDPH-DSGPHILLANIYASAGRLNDA 416
RI E D L N+Y G L DA
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDA 586
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 145/268 (54%), Gaps = 2/268 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++HA ++ ++++ + L++MY + + DA +F + ++ +SWN+LI+ +A++
Sbjct: 47 KRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ 106
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+KA + F EM GF P +Y S+ TA S LE GK +H+ +IK+G Q V
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L+ MY K G + A +VF + RDVVS+N+ML AQ K + F +M GI+
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P++VT++ +L A + +LDEG+ L + G+ + V + R G +D A +
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286
Query: 354 IREMPIEPTAAVWGALLGACRMH-KNVE 380
+ + V+ AL+ A H NVE
Sbjct: 287 FKGTA-DRDVVVYNALIAALAQHGHNVE 313
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 6/243 (2%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
E +Y ++ L + K +HA ++++ F+ N L++MY K S+ DA +
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF + +RDV+SWNS+++ AQ G K + FE+M G PN++T++ +LTAC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALL 370
L+ G+ + + K G + + + + + G+ G L RA + I P V + +L
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNTML 201
Query: 371 G--ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
G A + + LG + + P D +I L + + + L++ R K+ E G+
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260
Query: 429 KKE 431
+
Sbjct: 261 NSD 263
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/603 (39%), Positives = 365/603 (60%), Gaps = 40/603 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +H+HI + D+ + N ++ Y KC C+ +AR+ FD M +D+++W
Sbjct: 290 CNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISW 349
Query: 62 TALISGYSQN-----DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQ 115
+A+I+GY+Q+ + + L +M R G+ PN+ T S+LKA GA + GRQ
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQ--GRQ 407
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQMDD----AWF----------- 150
+HA K G++ + + +++ +MYA+ F +M++ AW
Sbjct: 408 IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGD 467
Query: 151 ------LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+F+ + ++N VSWN +IAG+A+ + K S M EGF+P + S+ A
Sbjct: 468 LTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEA 527
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ +LE+GK VHA +K G + V +L+ MY+K G + +A VF+++ RD V+W
Sbjct: 528 CGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAW 587
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
N+ML G QHG+G V F++ML+ + PN++TF V++AC AGL+ EG+ F +M++
Sbjct: 588 NAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE 647
Query: 325 H-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
++P + HY VDLLGRAG L A +FI+ MP EP +VW ALLGAC+ H NV+L
Sbjct: 648 DFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAE 707
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AA I L+P ++ ++ L+NIYA AGR +D+ + RK+M + G+KK+ S +E +
Sbjct: 708 WAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRI 767
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H FVA D AHP+ IH + +++++K+ GY PD VL D+ ++E L HSEKLA
Sbjct: 768 HTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLA 827
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+A+ L+ TPPG+ I I KN+RVCGDCH+A KF SK+ +REI+ RD NRFH+F++G CSCG
Sbjct: 828 IAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCG 887
Query: 564 DYW 566
D+W
Sbjct: 888 DFW 890
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 205/374 (54%), Gaps = 7/374 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ ++ ++VH + DI + N+++N Y+K G + ++F M ++D+VTW
Sbjct: 88 CAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTW 147
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++I+ Y+ N+ P A F +M ++PN+ T S+LKA + +K R++H
Sbjct: 148 SSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEK-AREIHTVVK 206
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + +V V ++L+ MY++ ++ A +F ++ +N VSW A+I +A+ + +A
Sbjct: 207 ASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFE 266
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +ML+ G P ++ S+ + + +L +G+ +H+H+ + G + V N L+ MY
Sbjct: 267 LYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYC 326
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA-----TVRWFEKMLRNGIAPNQ 296
K I+DA + F+R+ KRDV+SW++M+ G AQ G + E+M R G+ PN+
Sbjct: 327 KCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNK 386
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
VTF+ +L ACS G L++G+ A + K G E + + ++ + G + A + +
Sbjct: 387 VTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446
Query: 357 MPIEPTAAVWGALL 370
M + A W +LL
Sbjct: 447 MENKNVVA-WASLL 459
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 207/496 (41%), Gaps = 70/496 (14%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G+ VH + G ++Y+G+SL++ Y++F + +F + ++ V+W+++IA +A
Sbjct: 97 GKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ KA TF M EP ++ S+ A + LE+ + +H V SG + V
Sbjct: 157 NNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAV 216
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
L+ MY+K G I A ++F ++ +R+VVSW +++ AQH +EKML+ GI
Sbjct: 217 ATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGI 276
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL------ 346
+PN VTF+ +L +C+ L+ G+ + + + G+E + + + +
Sbjct: 277 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARE 336
Query: 347 ------------------------------LDRALKFIREMPIE---PTAAVWGALLGAC 373
LD + + M E P + ++L AC
Sbjct: 337 TFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396
Query: 374 RMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASAGRLNDAARARKMMKESGV---- 428
+H +E G I ++ D + N+YA G + +A + M+ V
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWA 456
Query: 429 -------------KKEPACSWVETKNAV--HMFVANDDAHPQRAMIHKKWREISEKIKQI 473
E S + T+N V ++ +A + Q I K + E+ +K
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIA---GYAQSGDIAKVF-ELLSSMKVE 512
Query: 474 GYVPDSSHVLSYADQQEREAKLQ----VHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
G+ PD ++S + + L+ VH+E + L + S I + CG+
Sbjct: 513 GFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSK---CGEV 569
Query: 530 HSAFKFASKVVEREII 545
A K+ R+ +
Sbjct: 570 TEARTVFDKISNRDTV 585
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++A++ + + G +Y + A E GK VH + + G + ++GN+L
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++ Y+K G + E+VF R+ RDVV+W+SM+ A + FE+M I PN+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+TFL +L AC++ +L++ + ++K G+E + A + + + G + A + ++
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLN 414
M E W A++ A H+ + E++ + + P ++ + L N + LN
Sbjct: 240 MK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISP-NAVTFVSLLNSCNTPEALN 297
Query: 415 DAARARKMMKESGVKKE 431
R + E G++ +
Sbjct: 298 RGRRIHSHISERGLETD 314
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/567 (43%), Positives = 355/567 (62%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ + +H L +++ + + + + Y+KCG + +A K+F+EMP KD V+W
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 175
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GYS+ + E A++ F +M+ + +Q L S L A GA KFGR VH+ +
Sbjct: 176 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA-LKACKFGRSVHSSVV 234
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLF-TALESKNEVSWNALIAGHARKSEGEKAL 180
K G++ +++VG++L DMY++ M+ A +F E +N VS+ LI G+ + EK L
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 294
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ R+G EP F++SS+ A A+ +LEQG +HA V+K FV + LVDMY
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 354
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +E A + F+ + ++WNS+++ QHGLGK +++FE+M+ G+ PN +TF+
Sbjct: 355 GKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFI 414
Query: 301 CVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+LT CSHAGL++EG YF M K +GV P E HY +DLLGRAG L A +FI MP
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP A W + LGACR+H + E+G AAE++ +L+P +SG +LL+NIYA+ + D
Sbjct: 475 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 534
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ VKK P SWV+ H+F A D +H +++ I++K + ++IK GYVP +
Sbjct: 535 RMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXT 594
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V D +E L HSE++A+AFALIS P G I +KKN+RVC DCHSA KF SKV
Sbjct: 595 DSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 654
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R+IIVRD +RFHHF DG CSCGDYW
Sbjct: 655 TGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 205/372 (55%), Gaps = 3/372 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K+L+ + +HA ++ + + + N ++N Y+KCG LD A KLFD MP +++V+WTA+I
Sbjct: 19 KRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
SG SQN + AI F M G P QF SS ++A A + G+Q+H LK+G
Sbjct: 79 SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRAC-ASLGSIEMGKQMHCLALKFGI 137
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++VGS+L DMY++ M DA +F + K+EVSW A+I G+++ E E+AL F +
Sbjct: 138 GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKK 197
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M+ E S A + + + G+ VH+ V+K G + FVGN L DMY+K+G
Sbjct: 198 MIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 246 IEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+E A VF + R+VVS+ ++ G + + + F ++ R GI PN+ TF ++
Sbjct: 258 MESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC++ L++G A + K + + VD+ G+ GLL+ A++ E+ +PT
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTEI 376
Query: 365 VWGALLGACRMH 376
W +L+ H
Sbjct: 377 AWNSLVSVFGQH 388
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
MLR+ H V A T L +GK +HA +I +G F+ N LV+MY+K G
Sbjct: 1 MLRDTNALAH-----VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE 55
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ A K+F+ + +R++VSW +M++G +Q+ +R F M G P Q F + A
Sbjct: 56 LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRA 115
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ G ++ G+ L K G+ E D+ + G + A K EMP + +
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS- 174
Query: 366 WGALL 370
W A++
Sbjct: 175 WTAMI 179
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/567 (43%), Positives = 342/567 (60%), Gaps = 4/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R VHA L + + + +L+AY KCG ++ AR +FD MPV++ V+W
Sbjct: 129 CADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSW 188
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY+ N A+ LF +M++ G+ ++ + L+A G D+ R+VH +
Sbjct: 189 NAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEV-RRVHELLV 247
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKAL 180
+ G NV V ++L+ YA+ + D A +F L K +SWNA+I G + E A
Sbjct: 248 RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F+ M E P F+ SV A+A Q +W+H + I+ +V L+DMY
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMY 367
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G + A ++F+ R V++WN+M+ G HG G+A V FE+M G PN+ TFL
Sbjct: 368 SKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFL 427
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL ACSHAGL+DEGQ YFA MKK +G+EP HY T VDLLGRAG LD A FI+ MPI
Sbjct: 428 SVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPI 487
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP +V+GA+LGAC++HKNVEL +A+ IFEL P + H+LLANIYA+A D AR
Sbjct: 488 EPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARV 547
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ G++K P S ++ KN VH F + H I+ + ++ E+IK +GYVPD+
Sbjct: 548 RTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDT 607
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ D + + L HSEKLA+A+ LI T PG+TI IKKN+RVC DCH+A K S +
Sbjct: 608 DSIHDVEDDVKAQL-LNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLL 666
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD RFHHF+DG CSCGDYW
Sbjct: 667 TGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 4/355 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R VHA + ++ + N Y KC +AR++FD MP +D V W
Sbjct: 26 CAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAW 85
Query: 62 TALISGYSQNDQPENAI--ILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
A+++GY++N P +A+ ++ Q G +P+ TL SVL A A A R+VHAF
Sbjct: 86 NAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC-ADARALHACREVHAF 144
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
L+ G D V V +++LD Y + ++ A +F + +N VSWNA+I G+A +A
Sbjct: 145 ALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEA 204
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F M++EG + T S + A G L++ + VH +++ G V N L+
Sbjct: 205 MALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITT 264
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
YAK + A +VFN L K+ +SWN+M+ G Q+ + R F +M + P+ T
Sbjct: 265 YAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFT 324
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+ V+ A + + + +H ++ + +D+ + G + A +
Sbjct: 325 LVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRL 379
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 3/282 (1%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P T +++LK A A D GR VHA G ++L +MY + + DA
Sbjct: 14 PVLRTFTALLKLCAARA-DLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARR 72
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE--GFEPTHFSYSSVFTALAST 208
+F + S++ V+WNA++AG+AR A+ M E G P + SV A A
Sbjct: 73 VFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA 132
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
+L + VHA +++G + V ++D Y K G++E A VF+ + R+ VSWN+M+
Sbjct: 133 RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G A +G + F +M++ G+ + L L AC G LDE + L+ + G+
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + + D A + E+ + T W A++
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMI 294
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/542 (43%), Positives = 332/542 (61%), Gaps = 2/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I N ++N + + G LD A K+FDEM +++ TW A++SG Q + EN + LF +M
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
LG P++FTL SVL+ AG G+QVHA+ LKYGY++N+ VGSSL MY + +
Sbjct: 82 ELGFLPDEFTLGSVLRGC-AGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ + A+ +N V+WN LIAG+A+ E L ++ M G P + SV ++
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSS 200
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A +L QG+ +HA IK+G V ++L+ MY+K G +ED+ K D V W+
Sbjct: 201 AELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWS 260
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KK 324
SM+ HG G+ V FE+M + G+ N VTFL +L ACSH GL ++G G+F LM +K
Sbjct: 261 SMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEK 320
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+G++P HY VDLLGR+G LD A IR MP+E +W LL ACR+H+N ++
Sbjct: 321 YGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATR 380
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AE I L+P DS ++LL+NI+ASA R D ++ R M++ VKKEP SW+E KN V
Sbjct: 381 TAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVF 440
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F D +HP I +E+ E++K GYVPD++ V D +E+E L HSEKLA+
Sbjct: 441 QFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAI 500
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF L++ PPGS I + KN+R+C DCH A K S + REIIVRDT+RFHHF+ G CSCGD
Sbjct: 501 AFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGD 560
Query: 565 YW 566
YW
Sbjct: 561 YW 562
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 154/290 (53%), Gaps = 3/290 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VHA++L ++ ++ + +++ + Y K G L E K+ M ++++V W
Sbjct: 99 CAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAW 158
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+G +QN E + L++ M GL+P++ TL SV+ +S AT + G+Q+HA +
Sbjct: 159 NTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ-GQQIHAEAI 217
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + V V SSL+ MY++ ++D+ E + V W+++IA + GE+A+
Sbjct: 218 KAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVH 277
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +M +EG ++ S+ A + G E+G +++ G T +VD+
Sbjct: 278 LFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLL 337
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
+SG +++AE + + L+ DVV W ++L+ C H R E++LR
Sbjct: 338 GRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILR 387
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 239 MYAKSGSIED-------------------------------AEKVFNRLLKRDVVSWNSM 267
MY K G I++ A KVF+ +L+R+V +WN+M
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
++G Q + + F +M G P++ T VL C+ G+ A + K+G
Sbjct: 61 VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYA 385
E + + ++G L K I+ M I A W L+ + + E L Y
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVA-WNTLIAGNAQNGHFEGVLDLYN 179
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
++ L P I L ++ +S+ L + +++ E+
Sbjct: 180 MMKMSGLRP----DKITLVSVISSSAELATLFQGQQIHAEA 216
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/611 (38%), Positives = 365/611 (59%), Gaps = 76/611 (12%)
Query: 31 NTILNAYAK--------CGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP-------- 74
N +L+ Y K C + ARKLFDEMP +D +TWT +I+GY +ND
Sbjct: 188 NALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247
Query: 75 -----------------------ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK 111
+ A+ L +M LG++ + T ++++ A A +
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISAC-ANVGSFQ 306
Query: 112 FGRQVHAFCLKYGYDWN----VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
G+QVHA+ LK + N + V ++L+ +Y + +++D+A +F A+ +N ++WNA++
Sbjct: 307 MGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAIL 366
Query: 168 AGH-------------------------------ARKSEGEKALRTFSEMLREGFEPTHF 196
+G+ A+ G++ L+ F +M +GFEP F
Sbjct: 367 SGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+++ TA + G+LE G+ +HA ++ G + VGN ++ MYAK G +E AE VF +
Sbjct: 427 AFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM 486
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D+VSWNSM+ QHG G + F++ML+ G+ P+++TFL VLTACSHAGL+++G+
Sbjct: 487 PSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 317 GYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
YF ++++ +G+ P E HY VDL RAG+ A I MP +P A VW ALL CR+
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H N++LG AAE++F+L P + G ++LL+NIYA GR N+ A+ RK+M++ V+KEPACS
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACS 666
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E +N VH+F+ +DD HP+ +++ ++ ++K++GY+PD+ VL + +++E L
Sbjct: 667 WIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHAL 726
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+ F ++ PPG+T+ + KNIR+CGDCH+AFKF SKV REIIVRD RFHHF
Sbjct: 727 STHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHF 786
Query: 556 RDGFCSCGDYW 566
++G CSC DYW
Sbjct: 787 KNGDCSCRDYW 797
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 162/311 (52%), Gaps = 8/311 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I N IL+ Y G ++EA+ F+EMPVK+++T T +ISG +QN + + LF QM
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 86 RLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
G +P F + L A S GA ++ GRQ+HA + GY+ ++ VG++++ MYA+
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALEN--GRQLHAQLVHLGYESSLSVGNAMISMYAKCGV 475
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++ A +F + S + VSWN++IA + G KA+ F +ML+EG P ++ +V TA
Sbjct: 476 VEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTA 535
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSIEDAEKVFNRLL-KRDVV 262
+ G +E+G+ +++S G +VD++ ++G A V + + K
Sbjct: 536 CSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAP 595
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFAL 321
W ++L GC HG + E++ + + P N T++ + + G +E L
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQLFK--LMPQNDGTYVLLSNIYADVGRWNEVAKVRKL 653
Query: 322 MKKHGVEPEEA 332
M+ V E A
Sbjct: 654 MRDQAVRKEPA 664
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 201/483 (41%), Gaps = 113/483 (23%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---------------- 54
AR VHAH++ S FK N +L Y K L AR+LF+E+P
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 55 -----------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
++D V + A+I+GY+ N +A+ LF M R +P+ FT +
Sbjct: 92 LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYD----------WNVYVG--------------- 132
SVL A +++ Q+H +K G +VYV
Sbjct: 152 SVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSA 211
Query: 133 ---------------SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++++ Y R D ++ A +F A+ +WNA+I+G+ +
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQ 271
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GGQLVAFVG 233
+AL +M G + +Y+++ +A A+ GS + GK VHA+++K+ V
Sbjct: 272 EALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVS 331
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS--------------------------- 266
N L+ +Y K+ +++A K+F + R++++WN+
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391
Query: 267 ----MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
M++G AQ+G G ++ F++M +G P F LTACS G L+ G+ A +
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL 451
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH----KN 378
G E + + + + G+++ A MP + W +++ A H K
Sbjct: 452 VHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVS-WNSMIAALGQHGHGVKA 510
Query: 379 VEL 381
+EL
Sbjct: 511 IEL 513
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HA ++ +++ +++ N +++ YAKCG ++ A +F MP D+V+W
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSW 494
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Q+ AI LF QML+ G+ P++ T +VL A +K ++
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
YG + ++D++ R A + ++ SK W AL+AG
Sbjct: 555 SYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG 603
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 33/130 (25%)
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS------------------------- 243
S + VHAH+I SG + N L++MY KS
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLI 86
Query: 244 ------GSIEDAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
G++E ++FN L RD V +N+M+TG A +G G + + F M R+ P+
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 296 QVTFLCVLTA 305
TF VL+A
Sbjct: 147 DFTFTSVLSA 156
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/567 (40%), Positives = 356/567 (62%), Gaps = 4/567 (0%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C ++ L +++H++ I + ++ NT+L+ Y+KCG L+ A ++F+ M K +V+
Sbjct: 362 CANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVS 421
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT++I+GY + + AI LF +M G+ P+ + ++S+L A + K G+ VH +
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAING-NLKSGKIVHDYI 480
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + N +V ++L DMYA+ M DA +F+ ++ K+ +SWN +I G+ + S +AL
Sbjct: 481 RENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEAL 540
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+EM RE +P + + + A AS +L++G+ +H + +++G +V N +VDMY
Sbjct: 541 TLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMY 599
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G + A +F+ + +D+VSW M+ G HG G + F +M GI P++V+F+
Sbjct: 600 VKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFI 659
Query: 301 CVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSH+GLLDEG F +MKK +EP HY VDLL R G L +A KFI+ MPI
Sbjct: 660 SILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPI 719
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A +WGALL CR+H +V+L AERIFEL+P ++G ++LLANIYA A + + +
Sbjct: 720 KPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKL 779
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK + + G+KK P CSW+E K +++FVA D + PQ I + + K+K+ GY P +
Sbjct: 780 RKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKT 839
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
++ L AD++E+E L HSEKLA+AF +++ PPG TI + KN+RVCGDCH KF SK
Sbjct: 840 AYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKS 899
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD++RFHHF+DG CSC YW
Sbjct: 900 ASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K +++ R V + I S D + ++ Y KCG L E R +FD++ + W
Sbjct: 160 CAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLW 219
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+IS YS + +I LF QML LG+KPN +T SS+LK A A ++ GRQVH
Sbjct: 220 NLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEE-GRQVHGLIC 278
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G++ V +SL+ Y ++ A LF L ++ +SWN++I+G+ + ++ +
Sbjct: 279 KLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIE 338
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDM 239
F +ML G + + +VF A A+ G+L GK +H++ IK+ + V F NTL+DM
Sbjct: 339 IFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRF-NNTLLDM 397
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G + A +VF R+ ++ VVSW SM+TG + GL ++ F++M G+ P+
Sbjct: 398 YSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAV 457
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L AC+ G L G+ ++++ +E D+ + G + A M
Sbjct: 458 TSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKK 517
Query: 360 EPTAAVWGALLGA 372
+ + W ++G
Sbjct: 518 KDVIS-WNTMIGG 529
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y S+ A S+ G+ V + + SG + +G LV MY K G +++ VF++L
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+ + WN M++ + G ++ F++ML GI PN TF +L + ++EG+
Sbjct: 212 SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGR 271
Query: 317 GYFALMKKHG 326
L+ K G
Sbjct: 272 QVHGLICKLG 281
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/572 (41%), Positives = 355/572 (62%), Gaps = 37/572 (6%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR-LGL 89
N +++ + CG +D A F+ + +D+V+W ++I+G +Q+ A+ FS +L+ L
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------- 141
KP++F+L+S L A A FG+Q+H + ++ +D + VG++L+ MYA+
Sbjct: 237 KPDRFSLASALSAC-ANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIAR 295
Query: 142 -------FDQMDDAWF------------------LFTALESKNEVSWNALIAGHARKSEG 176
+D F +F +L+ + V+W A+I G+ +
Sbjct: 296 RIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLN 355
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
A+ F M+ EG P F+ +++ +A +S SL GK +HA I+SG L VGN L
Sbjct: 356 NDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNAL 415
Query: 237 VDMYAKSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
MYAK+GSI A KVFN L + RD VSW SM+ AQHGLG+ + FE+ML GI P+
Sbjct: 416 TTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPD 475
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+T++ VL+AC+H GL+++G+ YF LMK H ++P +HY VDL GRAGLL A KF+
Sbjct: 476 HITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFV 535
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
MP+EP WG+LL +C+++KNV+L AAER+ ++P++SG + LAN+Y+S G+ +
Sbjct: 536 ENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWD 595
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
DAA+ RK+MK GVKKE SWV+ +N H+F D HPQ+ I+K +I ++IK++G
Sbjct: 596 DAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMG 655
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
+ PD+ VL + + ++ L+ HSEKLA+AF +ISTP +T+ I KN+RVC DCH+A K
Sbjct: 656 FAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIK 715
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SK+V+REIIVRD RFHHF+DG CSC DYW
Sbjct: 716 FISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 206/428 (48%), Gaps = 74/428 (17%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NTIL+ YAK G L++A ++FD +PV+D V+WT +I GY+Q + E+AI +F M++ +
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P QFTL++VL AS A G++VH+F +K G V V +SLL+MYA+
Sbjct: 105 PTQFTLTNVL-ASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKV 163
Query: 142 -FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
FD+M D A F L ++ VSWN++IAG + +A
Sbjct: 164 VFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEA 223
Query: 180 LRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L+ FS +L++ +P FS +S +A A+ L GK +H +++++ VGN L+
Sbjct: 224 LQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALIS 283
Query: 239 MYAKSGSIE---------------------------------DAEKVFNRLLKRDVVSWN 265
MYAKSG +E A ++FN L DVV+W
Sbjct: 284 MYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWT 343
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G Q+GL + F+ M+ G PN T +L+A S L+ G+ A +
Sbjct: 344 AMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRS 403
Query: 326 G--VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
G + P + +T + +AG ++ A K + W +++ A H LG
Sbjct: 404 GEALSPSVGNALT--TMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG---LGE 458
Query: 384 YAAERIFE 391
A E +FE
Sbjct: 459 EAIE-LFE 465
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 169/312 (54%), Gaps = 9/312 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ +LN Y K G + AR++F+ + D+V WTA+I GY QN +AI +F M+
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G +PN FTL+++L AS + T G+Q+HA ++ G + VG++L MYA+ +
Sbjct: 367 SEGPRPNSFTLAAMLSAS-SSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425
Query: 146 DDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A +F L ++++ VSW ++I A+ GE+A+ F +ML G +P H +Y V +A
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEK-VFNRLLKRDV 261
G +EQG+ + ++K+ ++ + + +VD++ ++G +++A K V N ++ DV
Sbjct: 486 CTHGGLVEQGR-SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDV 544
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV-TFLCVLTACSHAGLLDEGQGYFA 320
++W S+L+ C + E++L I PN + + S G D+
Sbjct: 545 IAWGSLLSSCKVYKNVDLAKVAAERLLL--IEPNNSGAYSALANVYSSCGKWDDAAKIRK 602
Query: 321 LMKKHGVEPEEA 332
LMK GV+ E+
Sbjct: 603 LMKARGVKKEQG 614
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 173/379 (45%), Gaps = 45/379 (11%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M++LGL + + +++++ + +K + WN ++L YA+
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWN-----TILSGYAKQG 55
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+++ A +F + ++ VSW +I G+ + E A++ F +M+++ PT F+ ++V
Sbjct: 56 KLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLA 115
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR-------- 255
+ A+TGS GK VH+ V+K G V N+L++MYAK+G ++ A+ VF+R
Sbjct: 116 SCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSS 175
Query: 256 -----------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-G 291
L +RD+VSWNSM+ GC QHG +++F +L++
Sbjct: 176 WNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTS 235
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P++ + L+AC++ L G+ + + + A + + ++G ++ A
Sbjct: 236 LKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIAR 295
Query: 352 KFIREMPIEPTAAV-WGALLGACRMHKNVELGAYA-AERIFE-LDPHDSGPHILLANIYA 408
+ I + I + + ALL V+LG A +IF L D + Y
Sbjct: 296 RIIEQSGISDLDVIAFTALLNGY-----VKLGDITPARQIFNSLKDPDVVAWTAMIVGYV 350
Query: 409 SAGRLNDAARARKMMKESG 427
G NDA K M G
Sbjct: 351 QNGLNNDAIEVFKTMVSEG 369
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTW 61
+ + L + +HA + S ++ N + YAK G ++ ARK+F+ + +D V+W
Sbjct: 385 SSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSW 444
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I +Q+ E AI LF QML LG+KP+ T VL A G ++
Sbjct: 445 TSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKN 504
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ D + + ++D++ R + +A+ F+ + ++W +L++ + A
Sbjct: 505 VHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAK 564
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+L EP + S ++ALA+ S GKW A I+
Sbjct: 565 VAAERLLL--IEPNN---SGAYSALANVYS-SCGKWDDAAKIR 601
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/566 (41%), Positives = 350/566 (61%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +K L+E VHA IL S FK++ ++NT++ YA CG + AR +FD MP + +V W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++SGY++N + + LF ++L L ++ + T+ SVL A G A + + G + + +
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLA-NLEIGELIGEYIV 249
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G N + +SL+DMYA+ Q+D A LF ++ ++ V+W+A+I+G+A+ ++AL
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALN 309
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM + P + SV + A G+ E GKWVH ++ K +L +G L+D YA
Sbjct: 310 LFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYA 369
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+ + +VF + ++V +W +++ G A +G GK + +F ML N + PN VTF+
Sbjct: 370 KCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG 429
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSHA L+D+G+ F M++ +EP HY VD+LGRAG L+ A +FI MP
Sbjct: 430 VLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFP 489
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VW LL +CR HKN+E+ + E I L+P SG +ILL+N YA GR+ DA R R
Sbjct: 490 PNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVR 549
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++KE +KK P CS +E VH F + D H IH ++ ++IK++GYVP++
Sbjct: 550 SLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTD 609
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
A+++ +E + HSEKLA+A+ LI T P +TI I KN+R+C DCH+A KF S+V
Sbjct: 610 DARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVF 669
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
ER IIVRD NRFHHF+DG CSC DYW
Sbjct: 670 ERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 195/368 (52%), Gaps = 6/368 (1%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC--GCLDEARKLFDEMPVKDMVTWTA 63
K K+ + VHAH+L + D + +L + A +D A +F+ + + +
Sbjct: 32 KTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNV 91
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLK 122
+I G + P+NA++LF +M ++ ++FT SSVLKA S A + G QVHA LK
Sbjct: 92 MIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALRE--GEQVHALILK 149
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G+ N +V ++L+ MYA Q+ A +F + ++ V+WN++++G+ + ++ ++
Sbjct: 150 SGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKL 209
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F ++L E + SV A +LE G+ + +++ G + + +L+DMYAK
Sbjct: 210 FRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAK 269
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G ++ A K+F+ + KRDVV+W++M++G AQ K + F +M + + PN+VT + V
Sbjct: 270 CGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSV 329
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L +C+ G + G+ +KK ++ +D + G +DR+++ +EM +
Sbjct: 330 LYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK-N 388
Query: 363 AAVWGALL 370
W AL+
Sbjct: 389 VFTWTALI 396
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/566 (43%), Positives = 351/566 (62%), Gaps = 3/566 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
TH + L++ +H ++ F+ + + ++N Y+K + KLFD P K TW+
Sbjct: 18 THTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWS 77
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++IS ++QND P A+ F +MLR GL P+ TL + K S A + +HA LK
Sbjct: 78 SVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAK-SVAALSSLPLALSLHALSLK 136
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ +V+VGSSL+D YA+ ++ A +F + KN VSW+ +I G+++ E+AL
Sbjct: 137 TAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNL 196
Query: 183 FSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F L + ++ F+ SSV +++ E GK VH K+ FV ++L+ +Y
Sbjct: 197 FKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLY 256
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G +E KVF + R++ WN+ML CAQH T FE+M R G+ PN +TFL
Sbjct: 257 SKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFL 316
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
C+L ACSHAGL+++G+ F LMK+HG+EP HY T VDLLGRAG L+ A+ I+EMP++
Sbjct: 317 CLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQ 376
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT +VWGALL CR+H N EL ++ A+++FE+ SG +LL+N YA+AGR +AARAR
Sbjct: 377 PTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARAR 436
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMM++ G+KKE SWVE N VH F A D +H + I++K E+ E++ + GYV D+S
Sbjct: 437 KMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTS 496
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D E+ ++ HSE+LA+AF LI+ PP I + KN+RVCGDCH+A KF SK
Sbjct: 497 FVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCT 556
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFH F DG C+CGDYW
Sbjct: 557 GRVIIVRDNNRFHRFEDGKCTCGDYW 582
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/570 (42%), Positives = 356/570 (62%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
C +++ L + +H+ + D + ++N YAKC G + ARK+FD++ ++
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 59 VTWTALISGYSQND-QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+WTA+I+GY Q E A+ LF M+ + PN FT SS LKA A + G QV
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKAC-ANLAALRIGEQVF 399
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G+ V +SL+ MYAR ++DDA F L KN +S+N +I +A+ E
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F+E+ +G + F+++S+ + AS G++ +G+ +HA VIKSG +L V N L+
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VF + R+V+SW S++TG A+HG + F KML G+ PN+V
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEV 579
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH GL++EG +F ++ +HGV P HY VD+LGR+G L A++FI
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINS 639
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP + A VW LGACR+H N+ELG +AA+ I E +PHD +ILL+N+YAS + ++
Sbjct: 640 MPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEV 699
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+ RK MKE + KE CSWVE +N VH F D +HP+ A I+ + + +S KIK++GYV
Sbjct: 700 SNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYV 759
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P+ VL +++++E L HSEK+A+AF LIST I + KN+R+CGDCHSA K+
Sbjct: 760 PNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYI 819
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S REIIVRD NRFHH +DG CSC +YW
Sbjct: 820 SMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 179/359 (49%), Gaps = 8/359 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMV 59
KC + +VH + S + D N++++ Y+KCG ++A +F M +D++
Sbjct: 75 KCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLI 134
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W+A++S ++ N+ A++ F M+ G PN++ ++ +A A G + F
Sbjct: 135 SWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST-AEFVSVGDSIFGF 193
Query: 120 CLKYGY-DWNVYVGSSLLDMYAR-FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K GY +V VG L+DM+ + + A+ +F + +N V+W +I +
Sbjct: 194 VIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A+ F +M+ G+EP F+ S V +A A+ L G+ +H+ I+ G L VG L+
Sbjct: 254 EAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 238 DMYAK---SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH-GLGKATVRWFEKMLRNGIA 293
+MYAK GS+ A K+F+++L +V SW +M+TG Q G + + F M+ +
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN TF L AC++ L G+ F K G + + + R+G +D A K
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
KA+ T M+ +G P +YS T S + G VH + +S QL + N+L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 238 DMYAKSGSIEDAEKVFNRLL--KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+Y+K G E A +F RL+ RD++SW++M++ A + +G + F M+ NG PN
Sbjct: 109 SLYSKCGQWEKATSIF-RLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPN 167
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLL--GRAGLLDRALK 352
+ F ACS A + G F + K G ++ + +D+ GR L+ A K
Sbjct: 168 EYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS-AFK 226
Query: 353 FIREMPIEPTAAVWGALL 370
+MP E A W ++
Sbjct: 227 VFEKMP-ERNAVTWTLMI 243
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/570 (42%), Positives = 355/570 (62%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
C +++ L + +H+ + D + ++N YAKC G + ARK+FD++ ++
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 59 VTWTALISGYSQND-QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+WTA+I+GY Q E A+ LF M+ + PN FT SS LKA A + G QV
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKAC-ANLAALRIGEQVF 399
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G+ V +SL+ MYAR ++DDA F L KN +S+N +I +A+ E
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F+E+ +G + F+++S+ + AS G++ +G+ +HA VIKSG +L V N L+
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G+IE A +VF + R+V+SW S++TG A+HG + F KML G+ PN V
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLV 579
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH GL++EG +F ++ +HGV P HY VD+LGR+G L A++FI
Sbjct: 580 TYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINS 639
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP + A VW LGACR+H N+ELG +AA+ I E +PHD +ILL+N+YAS + ++
Sbjct: 640 MPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEV 699
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+ RK MKE + KE CSWVE +N VH F D +HP+ A I+ + + +S KIK++GYV
Sbjct: 700 SNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYV 759
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P+ VL +++++E L HSEK+A+AF LIST I + KN+R+CGDCHSA K+
Sbjct: 760 PNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYI 819
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S REIIVRD NRFHH +DG CSC +YW
Sbjct: 820 SMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 179/359 (49%), Gaps = 8/359 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMV 59
KC + +VH + S + D N++++ Y+KCG ++A +F M +D++
Sbjct: 75 KCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLI 134
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W+A++S ++ N+ A++ F M+ G PN++ ++ +A A G + F
Sbjct: 135 SWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST-AEFVSVGDSIFGF 193
Query: 120 CLKYGY-DWNVYVGSSLLDMYAR-FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K GY +V VG L+DM+ + + A+ +F + +N V+W +I +
Sbjct: 194 VVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A+ F EM+ G+EP F+ S V +A A+ L G+ +H+ I+ G L VG L+
Sbjct: 254 EAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 238 DMYAK---SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH-GLGKATVRWFEKMLRNGIA 293
+MYAK GS+ A K+F+++L +V SW +M+TG Q G + + F M+ +
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN TF L AC++ L G+ F K G + + + R+G +D A K
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
KA+ T M+ +G P +YS T S + G VH + +S QL + N+L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+Y+K G E A +F + RD++SW++M++ A + +G + F M+ NG PN+
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLL--GRAGLLDRALKF 353
F ACS A + G F + K G ++ + +D+ GR L+ A K
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS-AFKV 227
Query: 354 IREMPIEPTAAVWGALL 370
+MP E A W ++
Sbjct: 228 FEKMP-ERNAVTWTLMI 243
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/567 (41%), Positives = 351/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + R HA I+ + DI N ++N Y+KC +D ARK F+EMPVK +V+W
Sbjct: 53 CAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSW 112
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I +QN + A+ L QM R G N+FT+SSVL + A Q+HAF +
Sbjct: 113 NTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVL-CNCAFKCAILECMQLHAFSI 171
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D N +VG++LL +YA+ + DA +F ++ KN V+W++++AG+ + E+AL
Sbjct: 172 KAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALL 231
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F GF+ F SS +A A +L +GK VHA KSG +V ++L+DMYA
Sbjct: 232 IFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYA 291
Query: 242 KSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G I +A VF +L+ R +V WN+M++G A+H + FEKM + G P+ VT++
Sbjct: 292 KCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYV 351
Query: 301 CVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
CVL ACSH GL +EGQ YF LM ++H + P HY +D+LGRAGL+ +A I MP
Sbjct: 352 CVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPF 411
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
T+++WG+LL +C+++ N+E AA+ +FE++P+++G HILLANIYA+ + ++ ARA
Sbjct: 412 NATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARA 471
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK+++E+ V+KE SW+E KN +H F + HPQ I+ K + ++K++ Y D+
Sbjct: 472 RKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDT 531
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S+ L ++ ++ L+ HSEKLA+ F L+ P I I KN+R+CGDCH+ K SK
Sbjct: 532 SNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKS 591
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDTNRFHHF+DGFCSCG++W
Sbjct: 592 TSREIIVRDTNRFHHFKDGFCSCGEFW 618
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/566 (40%), Positives = 356/566 (62%), Gaps = 7/566 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + E ++ H+ + + + + N ++N Y K L++A +LFD+MP +++++W
Sbjct: 71 CISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISW 130
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +IS YS+ + A+ L MLR ++PN +T SSVL+ S G +D R +H +
Sbjct: 131 TTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCNGMSD---VRMLHCGII 186
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +V+V S+L+D++A+ + +DA +F + + + + WN++I G A+ S + AL
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M R GF + +SV A LE G H H++K L+ + N LVDMY
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYC 304
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VFN++ +RDV++W++M++G AQ+G + ++ FE+M +G PN +T +
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVG 364
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSHAGLL++G YF MKK +G++P HY +DLLG+AG LD A+K + EM E
Sbjct: 365 VLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A W LLGACR+ +N+ L YAA+++ LDP D+G + LL+NIYA++ + + R
Sbjct: 425 PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIR 484
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
M++ G+KKEP CSW+E +H F+ D++HPQ + KK ++ ++ IGYVP+++
Sbjct: 485 TRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETN 544
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + ++ E L+ HSEKLALAF L++ P I I+KN+R+CGDCH K ASK+
Sbjct: 545 FVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLE 604
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R I++R R+HHF+DG CSCGDYW
Sbjct: 605 IRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A++ + G +YS + S ++ +G + H+ +G + + F+ N L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+MY K + DA ++F+++ +R+V+SW +M++ ++ + + + MLR+ + PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T+ VL +C+ G+ D + ++K+ G+E + +D+ + G + AL EM
Sbjct: 164 TYSSVLRSCN--GMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 358 PIEPTAAVWGALLG-----------------------------------ACRMHKNVELG 382
+ A VW +++G AC +ELG
Sbjct: 221 -VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A I + D D + L ++Y G L DA R MKE V
Sbjct: 280 MQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/566 (42%), Positives = 361/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L L +H H++ + F+ ++ + + +++ YAK G L A ++ +P D+V+W
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+GY Q+D A+ LF +M G++ + +S + A AG + G+Q+HA
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC-AGIRALRQGQQIHAQSY 591
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ ++ + ++L+ +YAR ++ +A+ F + KN +SWN+L++G A+ E+AL+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQ 651
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F MLR E F+Y S +A AS +++QG+ +H+ V+K+G V N+L+ +YA
Sbjct: 652 VFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYA 711
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGSI DA + FN + +R+V+SWN+M+TG +QHG G +R FE+M GI PN VTF+
Sbjct: 712 KSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVG 771
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+ EG YF ++ K H + P+ HYV VDLLGRAG LDRA+++I+EMPI
Sbjct: 772 VLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A +W LL AC +HKN+E+G AA + EL+P DS ++L++NIYA + + +R
Sbjct: 832 ADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSR 891
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ GVKKEP SW+E KNAVH F A D HP I++ ++ + +IGYV DS
Sbjct: 892 KLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSF 951
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L+ ++Q +++ VHSEKLA+AF L+S I + KN+RVC DCH+ K+ SK+
Sbjct: 952 SLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKIS 1011
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD +RFHHF G CSC D+W
Sbjct: 1012 NRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 192/363 (52%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH+ F + + N +++ Y+K G ++ A+K+F+ + +KD+VTW A+ISG SQN
Sbjct: 182 VHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGL 241
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E AI+LF M + P + LSSVL AS + G Q+H +K+G+ YV +
Sbjct: 242 EEEAILLFCDMHASEIFPTPYVLSSVLSAS-TKIQLFELGEQLHCLVIKWGFHSETYVCN 300
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+ +Y+R ++ A +F+ + S++ VS+N+LI+G ++ ++AL F++M R+ +P
Sbjct: 301 GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ +A AS G+L +G +H+H IK+G + +L+D+Y+K +E A K F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++V WN ML Q + F +M G+ PNQ T+ +L C+ G L
Sbjct: 421 LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ + K G + +D+ + G L AL+ +R +P E W A++
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGY 539
Query: 374 RMH 376
H
Sbjct: 540 VQH 542
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 193/376 (51%), Gaps = 4/376 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +H+H + + DI ++ ++L+ Y+KC ++ A K F +++V W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLW 431
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
++ Y Q D ++ +F QM G+ PNQFT S+L+ + GA G Q+H
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL--YLGEQIHTHV 489
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+ NVYV S L+DMYA++ Q+ A + L + VSW A+IAG+ + +AL
Sbjct: 490 IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEAL 549
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F EM G + + ++S +A A +L QG+ +HA +G + N L+ +Y
Sbjct: 550 QLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLY 609
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ G I++A F ++ ++ +SWNS+++G AQ G + ++ F +MLR N T+
Sbjct: 610 ARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++A + + +GQ +++ K G + E + + L ++G + A + +M E
Sbjct: 670 SAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-E 728
Query: 361 PTAAVWGALLGACRMH 376
W A++ H
Sbjct: 729 RNVISWNAMITGYSQH 744
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 179/348 (51%), Gaps = 1/348 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T ++ + +H ++ F ++ + N ++ Y++ L A ++F M +D V++
Sbjct: 272 TKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYN 331
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+LISG Q + A+ LF++M R LKP+ T++S+L A + K G Q+H+ +K
Sbjct: 332 SLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK-GMQLHSHAIK 390
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G ++ + SLLD+Y++ ++ A F E++N V WN ++ + + +
Sbjct: 391 AGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M EG P F+Y S+ S G+L G+ +H HVIK+G QL +V + L+DMYAK
Sbjct: 451 FRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAK 510
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G + A ++ RL + DVVSW +M+ G QH + ++ FE+M GI + + F
Sbjct: 511 YGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASA 570
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
++AC+ L +GQ A G + + + L R G + A
Sbjct: 571 ISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 1/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L E +H I S F + + +++++ Y + G A K+FDE + + +W
Sbjct: 68 CLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSW 127
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I + LF +ML G+ PN +T + VLKA G + +QVH+
Sbjct: 128 NKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTF 187
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
YG+D + V + L+D+Y++ ++ A +F + K+ V+W A+I+G ++ E+A+
Sbjct: 188 YYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAIL 247
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M PT + SSV +A E G+ +H VIK G +V N LV +Y+
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+S + AE++F+ + RD VS+NS+++G Q G + F KM R+ + P+ +T
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L+AC+ G L +G + K G+ + + +DL + ++ A KF E
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETE- 426
Query: 362 TAAVWGALLGA 372
+W +L A
Sbjct: 427 NIVLWNVMLVA 437
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
K ++ + M G + +Y + ++GSL + +H + KSG + ++LV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
D Y + G A KVF+ R V SWN M+ F +ML GI PN
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 298 TFLCVLTAC 306
TF VL AC
Sbjct: 161 TFAGVLKAC 169
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/632 (39%), Positives = 364/632 (57%), Gaps = 68/632 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEAR-------------- 47
C + R VH+ ++ + + + N++LN Y KCG + AR
Sbjct: 172 CAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSW 231
Query: 48 -----------------KLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-L 89
LF+ MP + +V+W A+I+GY+QN A+ FS+ML +
Sbjct: 232 NAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTM 291
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY------------------------ 125
P++FT++SVL A A G+QVHA+ L+
Sbjct: 292 APDEFTITSVLSAC-ANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENAR 350
Query: 126 ---------DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
D NV ++LL+ Y + M A +F + +++ V+W A+I G+ +
Sbjct: 351 GVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHN 410
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++A+ F M+R G EP ++ ++V + AS LE GK +H I+S + + V N++
Sbjct: 411 DEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSI 470
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
V MYA+SGS+ A +VF+R+ +++ V+W SM+ AQHGLG+ V FE+MLR G+ P+
Sbjct: 471 VTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPD 530
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
++TF+ VL+AC+H G +DEG+ YF L KHG+ PE +HY VDLL RAGL A +FI
Sbjct: 531 RITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFI 590
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
++MP+EP A WG+LL ACR+HKN +L AAE++ +DP +SG + L+N+Y++ GR N
Sbjct: 591 QQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWN 650
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
DAA+ K K+ VKKE SW N VH+F A+D HPQR +++ ++ + IK+ G
Sbjct: 651 DAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAG 710
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
+VPD VL D + +E L HSEKLA+AF L+STP +T+ I KN+RVC DCH+A K
Sbjct: 711 FVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIK 770
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SKV +REII+RD RFHHF+DGFCSC DYW
Sbjct: 771 FISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 201/435 (46%), Gaps = 70/435 (16%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+EAR + I A + ++ N++L+ YAK G L +AR +F EMP +D V+WT ++ G
Sbjct: 79 FREARRLFDEI--PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVG 136
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK-FGRQVHAFCLKYGYD 126
++ + AI +F M+ GL P QFTL++VL S AT+ + GR+VH+F +K G
Sbjct: 137 LNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVL--SSCAATEARGVGRKVHSFVVKLGLS 194
Query: 127 WNVYVGSSLLDMY-------------------------------ARFDQMDDAWFLFTAL 155
V V +S+L+MY A +MD A LF +
Sbjct: 195 SCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENM 254
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQG 214
+ VSWNA+IAG+ + KAL FS ML P F+ +SV +A A+ G + G
Sbjct: 255 PDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIG 314
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV---------------------- 252
K VHA++++S + V N L+ MYAKSGS+E+A V
Sbjct: 315 KQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYV 374
Query: 253 -----------FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
F+ + RDVV+W +M+ G Q+G + F M+R+G PN T
Sbjct: 375 KLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAA 434
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL+ C+ L+ G+ + E + + V + R+G L A + +
Sbjct: 435 VLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRK 494
Query: 362 TAAVWGALLGACRMH 376
W +++ A H
Sbjct: 495 ETVTWTSMIVALAQH 509
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 214 GKWVHAHVIKSG--------------------------------------GQLVAFVGNT 235
G+ +HA +K+G Q F N+
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+ +YAKSG + DA VF + +RD VSW M+ G + G ++ F M+ +G++P
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
Q T VL++C+ G+ + + K G+ + +++ G+ G + A
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 356 EMPIEPTAAVWGALL 370
MP E + + W A++
Sbjct: 222 RMP-ERSVSSWNAMV 235
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/566 (42%), Positives = 361/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L L +H H++ + F+ ++ + + +++ YAK G L A ++ +P D+V+W
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+GY Q+D A+ LF +M G++ + +S + A AG + G+Q+HA
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC-AGIRALRQGQQIHAQSY 591
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ ++ + ++L+ +YAR ++ +A+ F + KN +SWN+L++G A+ E+AL+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQ 651
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F MLR E F+Y S +A AS +++QG+ +H+ V+K+G V N+L+ +YA
Sbjct: 652 VFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYA 711
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGSI DA + FN + +R+V+SWN+M+TG +QHG G +R FE+M GI PN VTF+
Sbjct: 712 KSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVG 771
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+ EG YF ++ K H + P+ HYV VDLLGRAG LDRA+++I+EMPI
Sbjct: 772 VLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A +W LL AC +HKN+E+G AA + EL+P DS ++L++NIYA + + +R
Sbjct: 832 ADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSR 891
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ GVKKEP SW+E KNAVH F A D HP I++ ++ + +IGYV DS
Sbjct: 892 KLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSF 951
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L+ ++Q +++ VHSEKLA+AF L+S I + KN+RVC DCH+ K+ SK+
Sbjct: 952 SLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKIS 1011
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD +RFHHF G CSC D+W
Sbjct: 1012 NRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 192/363 (52%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH+ F + + N +++ Y+K G ++ A+K+F+ + +KD+VTW A+ISG SQN
Sbjct: 182 VHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGL 241
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E AI+LF M + P + LSSVL AS + G Q+H +K+G+ YV +
Sbjct: 242 EEEAILLFCDMHASEIFPTPYVLSSVLSAS-TKIQLFELGEQLHCLVIKWGFHSETYVCN 300
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+ +Y+R ++ A +F+ + S++ VS+N+LI+G ++ ++AL F++M R+ +P
Sbjct: 301 GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ +A AS G+L +G +H+H IK+G + +L+D+Y+K +E A K F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++V WN ML Q + F +M G+ PNQ T+ +L C+ G L
Sbjct: 421 LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ + K G + +D+ + G L AL+ +R +P E W A++
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGY 539
Query: 374 RMH 376
H
Sbjct: 540 VQH 542
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 193/376 (51%), Gaps = 4/376 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +H+H + + DI ++ ++L+ Y+KC ++ A K F +++V W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLW 431
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
++ Y Q D ++ +F QM G+ PNQFT S+L+ + GA G Q+H
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL--YLGEQIHTHV 489
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+ NVYV S L+DMYA++ Q+ A + L + VSW A+IAG+ + +AL
Sbjct: 490 IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEAL 549
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F EM G + + ++S +A A +L QG+ +HA +G + N L+ +Y
Sbjct: 550 QLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLY 609
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ G I++A F ++ ++ +SWNS+++G AQ G + ++ F +MLR N T+
Sbjct: 610 ARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++A + + +GQ +++ K G + E + + L ++G + A + +M E
Sbjct: 670 SAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-E 728
Query: 361 PTAAVWGALLGACRMH 376
W A++ H
Sbjct: 729 RNVISWNAMITGYSQH 744
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 179/348 (51%), Gaps = 1/348 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T ++ + +H ++ F ++ + N ++ Y++ L A ++F M +D V++
Sbjct: 272 TKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYN 331
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+LISG Q + A+ LF++M R LKP+ T++S+L A + K G Q+H+ +K
Sbjct: 332 SLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK-GMQLHSHAIK 390
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G ++ + SLLD+Y++ ++ A F E++N V WN ++ + + +
Sbjct: 391 AGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M EG P F+Y S+ S G+L G+ +H HVIK+G QL +V + L+DMYAK
Sbjct: 451 FRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAK 510
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G + A ++ RL + DVVSW +M+ G QH + ++ FE+M GI + + F
Sbjct: 511 YGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASA 570
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
++AC+ L +GQ A G + + + L R G + A
Sbjct: 571 ISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 1/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L E +H I S F + + +++++ Y + G A K+FDE + + +W
Sbjct: 68 CLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSW 127
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I + LF +ML G+ PN +T + VLKA G + +QVH+
Sbjct: 128 NKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTF 187
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
YG+D + V + L+D+Y++ ++ A +F + K+ V+W A+I+G ++ E+A+
Sbjct: 188 YYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAIL 247
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M PT + SSV +A E G+ +H VIK G +V N LV +Y+
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+S + AE++F+ + RD VS+NS+++G Q G + F KM R+ + P+ +T
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L+AC+ G L +G + K G+ + + +DL + ++ A KF E
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETE- 426
Query: 362 TAAVWGALLGA 372
+W +L A
Sbjct: 427 NIVLWNVMLVA 437
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
K ++ + M G + +Y + ++GSL + +H + KSG + ++LV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
D Y + G A KVF+ R V SWN M+ F +ML GI PN
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 298 TFLCVLTAC 306
TF VL AC
Sbjct: 161 TFAGVLKAC 169
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/548 (44%), Positives = 347/548 (63%), Gaps = 4/548 (0%)
Query: 22 AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILF 81
F ++ + + + + Y+K G L EA ++FD+MP KD V WTA+I GY++N E A+I F
Sbjct: 149 GFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAF 208
Query: 82 SQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
M R GL +Q L SVL ASG G D R +H+ +K G++ V V ++L DMYA
Sbjct: 209 RDMRREGLVGADQHVLCSVLSASG-GLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYA 267
Query: 141 RFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
+ MD+A + + S N VS +LI G+ EKAL F E+ R+G EP F++S
Sbjct: 268 KAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFS 327
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A LEQG +HA VIK+ +FV +TL+DMY K G I + ++F +
Sbjct: 328 SMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYH 387
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
++WN+ + AQHG G+ +R F++M +GI PN +TF+ +LTACSHAGL+DEG YF
Sbjct: 388 TDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYF 447
Query: 320 ALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
MK H G+EP+ HY +D+ GRAG LD A KFI EMP++P A W +LLGACRM N
Sbjct: 448 YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507
Query: 379 VELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVE 438
ELG AA+ + +L+P ++G H+ L+ IYAS G+ D RK+M+++ +KK P SWV+
Sbjct: 508 KELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVD 567
Query: 439 TKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH 498
+ H+F + D +HPQ+ I++K E+ E+IK+ GYVPD+ + + ++ L+ H
Sbjct: 568 SNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYH 627
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
SE++A+AFALIS P I +KKN+R+C DCHSA KF SKV R+IIVRD +RFHHF G
Sbjct: 628 SERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKG 687
Query: 559 FCSCGDYW 566
CSCGDYW
Sbjct: 688 GCSCGDYW 695
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 195/380 (51%), Gaps = 9/380 (2%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C L+ R +HA +L A + N ++ Y+ C + A +LFD MP ++V+
Sbjct: 27 CGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVS 86
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L+SG +QN +A+ FS M R GL P QF LSS +A+ A G Q+H
Sbjct: 87 WTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAA-AALAARHAGAQLHCVG 145
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G+D ++V S+L DMY++ + +A +F + K+ V+W A+I G+A+ E A+
Sbjct: 146 VRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAV 205
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG---KWVHAHVIKSGGQLVAFVGNTLV 237
F +M REG + + L+++G L+ G + +H+ V+KSG + V N L
Sbjct: 206 IAFRDMRREGL--VGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263
Query: 238 DMYAKSGSIEDAEKVFN-RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
DMYAK+ +++A +V +VVS S++ G + + + F ++ R G+ PN+
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNE 323
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TF ++ C+ LL++G A + K + + T +D+ G+ GL+ +++ +E
Sbjct: 324 FTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383
Query: 357 MPIEPTAAVWGALLGACRMH 376
+ T W A + H
Sbjct: 384 IEYH-TDIAWNAAINVLAQH 402
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 133/264 (50%), Gaps = 7/264 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHA-FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
L++ L++ G A D + GR +HA L + ++ + L+ MY+ + A LF A
Sbjct: 20 LAAPLQSCGR-AGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDA 78
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ N VSW L++G + S AL FS M R G PT F+ SS A A+ + G
Sbjct: 79 MPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAG 138
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+H ++ G FV + L DMY+KSG + +A +VF+++ ++D V+W +M+ G A++
Sbjct: 139 AQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKN 198
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG---QGYFALMKKHGVEPEE 331
G +A V F M R G+ LC + S +G L +G + + + K G E E
Sbjct: 199 GNLEAAVIAFRDMRREGLVGADQHVLC--SVLSASGGLKDGWLARAIHSCVMKSGFEQEV 256
Query: 332 AHYVTFVDLLGRAGLLDRALKFIR 355
A D+ +A +D A + ++
Sbjct: 257 AVRNALTDMYAKAADMDNAARVVK 280
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ +HA ++ ++ +D + +T+L+ Y KCG + + +LF E+ + W
Sbjct: 333 CAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAW 392
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A I+ +Q+ AI F +M G++PN T S+L A S AG D+
Sbjct: 393 NAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEG--------- 443
Query: 121 LKYGYDWNVYVG--------SSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHA 171
LKY Y + G S ++DMY R ++D+A + K N W +L+ A
Sbjct: 444 LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLG--A 501
Query: 172 RKSEGEKALRTFSEMLREGFEP----THFSYSSVFTALA 206
+ G K L + EP H S S ++ +L
Sbjct: 502 CRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLG 540
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/611 (38%), Positives = 364/611 (59%), Gaps = 76/611 (12%)
Query: 31 NTILNAYAK--------CGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP-------- 74
N +L+ Y K C + ARKLFDEMP +D +TWT +I+GY +ND
Sbjct: 188 NALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247
Query: 75 -----------------------ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK 111
+ A+ L +M LG++ + T ++++ A A +
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISAC-ANVGSFQ 306
Query: 112 FGRQVHAFCLKYGYDWN----VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
G+Q+HA+ LK + N + V ++L+ +Y + +++D+A +F A+ +N ++WNA++
Sbjct: 307 MGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAIL 366
Query: 168 AGH-------------------------------ARKSEGEKALRTFSEMLREGFEPTHF 196
+G+ A+ G++ L+ F +M +GFEP F
Sbjct: 367 SGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+++ TA + G+LE G+ +HA ++ G + VGN ++ MYAK G +E AE VF +
Sbjct: 427 AFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM 486
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D+VSWNSM+ QHG G + F++ML+ G+ P+++TFL VLTACSHAGL+++G+
Sbjct: 487 PSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 317 GYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
YF ++++ +G+ P E HY VDL RAG+ A I MP +P A VW ALL CR+
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H N++LG AAE++F+L P + G ++LL+NIYA GR ND A+ RK+M++ V+KEPACS
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACS 666
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E +N VH+F+ +DD HP+ +++ ++ ++K++GY+PD+ VL + +++E L
Sbjct: 667 WIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHAL 726
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+ F ++ PP +T+ + KNIR+CGDCH+AFKF SKV REIIVRD RFHHF
Sbjct: 727 STHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHF 786
Query: 556 RDGFCSCGDYW 566
++G CSC DYW
Sbjct: 787 KNGDCSCRDYW 797
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 162/311 (52%), Gaps = 8/311 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I N IL+ Y G ++EA+ F+EMPVK+++T T +ISG +QN + + LF QM
Sbjct: 358 NIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR 417
Query: 86 RLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
G +P F + L A S GA ++ GRQ+HA + GY+ ++ VG++++ MYA+
Sbjct: 418 LDGFEPCDFAFAGALTACSVLGALEN--GRQLHAQLVHLGYESSLSVGNAMISMYAKCGV 475
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++ A +F + S + VSWN++IA + G KA+ F +ML+EG P ++ +V TA
Sbjct: 476 VEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTA 535
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSIEDAEKVFNRLL-KRDVV 262
+ G +E+G+ +++S G +VD++ ++G A V + + K
Sbjct: 536 CSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAP 595
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFAL 321
W ++L GC HG + E++ + + P N T++ + + G ++ L
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQLFK--LMPQNDGTYVLLSNIYADVGRWNDVAKVRKL 653
Query: 322 MKKHGVEPEEA 332
M+ V E A
Sbjct: 654 MRDQAVRKEPA 664
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 113/483 (23%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---------------- 54
AR VHAH++ S FK N +L Y K + AR+LF+E+P
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCA 91
Query: 55 -----------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
++D V + A+I+GY+ N +A+ LF M R +P+ FT +
Sbjct: 92 LGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFT 151
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYD----------WNVYVG--------------- 132
SVL A +++ Q+H +K G +VYV
Sbjct: 152 SVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSA 211
Query: 133 ---------------SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
++++ Y R D ++ A +F A+ +WNA+I+G+ +
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQ 271
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GGQLVAFVG 233
+AL +M G + +Y+++ +A A+ GS + GK +HA+++K+ V
Sbjct: 272 EALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVS 331
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS--------------------------- 266
N L+ +Y K+ +++A K+F + R++++WN+
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391
Query: 267 ----MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
M++G AQ+G G ++ F++M +G P F LTACS G L+ G+ A +
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL 451
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH----KN 378
G E + + + + G+++ A MP + W +++ A H K
Sbjct: 452 VHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVS-WNSMIAALGQHGHGVKA 510
Query: 379 VEL 381
+EL
Sbjct: 511 IEL 513
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HA ++ +++ +++ N +++ YAKCG ++ A +F MP D+V+W
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSW 494
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Q+ AI LF QML+ G+ P++ T +VL A +K ++
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
YG + ++D++ R A + ++ SK W AL+AG
Sbjct: 555 SYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG 603
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 33/130 (25%)
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS------------------------- 243
S + VHAH+I SG + N L++MY KS
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLI 86
Query: 244 ------GSIEDAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
G++E ++FN L RD V +N+M+TG A +G G + + F M R+ P+
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 296 QVTFLCVLTA 305
TF VL+A
Sbjct: 147 DFTFTSVLSA 156
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 344/565 (60%), Gaps = 2/565 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T+ L+ + +HA + F+ D+A+ N ++ Y K GC+ + KL++ M +D+++W
Sbjct: 426 TNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWN 485
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A +SG + + +F ML G PN +T S+L S + D +GRQVHA +K
Sbjct: 486 AYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL-GSCSCLFDVHYGRQVHAHIIK 544
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
D N +V ++L+DMYA+ ++DA F L ++ +W +I +A+ ++GEKAL
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M +EG +P F+ + + +S SLE G+ +H+ V KSG FVG+ LVDMYAK
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +E+AE +F L++RD ++WN+++ G AQ+G G + F ML GI+P+ VTF +
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGI 724
Query: 303 LTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ACSH GL++EG+ +F ++ + G+ P H VD+LGR G D FI++M +
Sbjct: 725 LSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQ 784
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
A +W +LGA +MH N+ LG AA ++FEL P + +ILL+NI+A+ GR +D R R
Sbjct: 785 NALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRS 844
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M GVKKEP CSWVE VH FV++D +HPQ IH K E+ ++ I YVP + +
Sbjct: 845 LMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEY 904
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + E++ L+ HSE+LAL FALIST I I KN+R+C DCH K S +
Sbjct: 905 VLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITN 964
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
+EI+VRD RFHHF++G CSC D+W
Sbjct: 965 QEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 201/379 (53%), Gaps = 5/379 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + L A+ +H I+ D + +++N YAKC AR + +MP +D+V+
Sbjct: 121 ECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVS 180
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTALI G ++I LF +M G+ PN+FTL++ LKA D G+Q+HA
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD-LGKQMHAQA 239
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G +++VGS+L+D+YA+ +++ A +F + +N+V+WN L+ G+A++ + L
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVL 299
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F M+ + F+ ++V A++ +L+QG+ +H+ +IK G + F+G LVDMY
Sbjct: 300 KLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMY 359
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G DA VF + K D+V W++++T Q G + +++ F M PNQ T
Sbjct: 360 SKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTIC 419
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A ++ G L GQ A + K+G E + A V + + G + K M ++
Sbjct: 420 SLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VD 478
Query: 361 PTAAVWGALLGA---CRMH 376
W A L C M+
Sbjct: 479 RDLISWNAYLSGLHDCGMY 497
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 187/349 (53%), Gaps = 1/349 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + +HA D+ + + +++ YAKCG ++ A K+F MP ++ VTW
Sbjct: 223 CSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTW 282
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L++GY+Q + LF M+ L +K N+FTL++VLK A + + K G+ +H+ +
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGC-ANSKNLKQGQVIHSLII 341
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GY+ N ++G L+DMY++ DA +F ++ + V W+ALI ++ + E++++
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M P ++ S+ +A +TG+L+ G+ +HA V K G + V N LV MY
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K+G + D K++ ++ RD++SWN+ L+G G+ + F ML G PN TF+
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+L +CS + G+ A + K+ ++ +D+ + L+ A
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 185/337 (54%), Gaps = 16/337 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + R VHAHI+ + ++ + +++ YAKC L++A F+ + V+D+ TW
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+ Y+Q +Q E A+ F QM + G+KPN+FTL+ L + A+ + G+Q+H+
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEG-GQQLHSMVF 644
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +++VGS+L+DMYA+ M++A LF AL ++ ++WN +I G+A+ +G KAL
Sbjct: 645 KSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALT 704
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F ML EG P +++ + +A + G +E+GK + + G + V + +VD+
Sbjct: 705 AFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFG-ISPTVDHCACMVDI 763
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LG-KATVRWFEKMLRNGIAP 294
+ G ++ E ++ L ++ + W ++L H LG KA + FE + P
Sbjct: 764 LGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFE------LQP 817
Query: 295 -NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ +++ + + G D+ + +LM GV+ E
Sbjct: 818 EEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
YSS+ AS SL K +H ++K + + +LV++YAK A V ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
RDVVSW +++ G G ++ F++M GI PN+ T L ACS LD G+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A K G+ + VDL + G ++ A K MP E W LL
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/542 (42%), Positives = 349/542 (64%), Gaps = 2/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ M NT++ +C ++EAR+LF+ M +D +TWT +++G++QN A+ +F +M
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMR 264
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ +Q+T S+L A GA + ++ G+Q+HA+ ++ YD NV+VGS+L+DMY++ +
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQ-GKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSI 323
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F + KN +SW ALI G+ + E+A+R FSEM R+G +P ++ SV ++
Sbjct: 324 KLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSC 383
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A+ SLE+G H + SG V N LV +Y K GSIEDA ++F+ + D VSW
Sbjct: 384 ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 443
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
++++G AQ G K T+ FEKML G+ P+ VTF+ VL+ACS AG +++G+ YF M+K
Sbjct: 444 ALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKD 503
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
HG+ P + HY +DL R+G L A +FI++MP+ P A WG LL ACR+ ++E+G +
Sbjct: 504 HGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKW 563
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AAE + E+DP + ++LL +++A+ G+ N+ A+ R+ M++ VKKEP CSW++ KN VH
Sbjct: 564 AAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVH 623
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
+F A+D +HP I++K ++ K+ + GY PD S VL ++ + HSEKLA+
Sbjct: 624 IFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAI 683
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF LI P I I KN+RVC DCH+A KF SK+ R+I+VRD RFH F DG CSCGD
Sbjct: 684 AFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGD 743
Query: 565 YW 566
+W
Sbjct: 744 FW 745
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 194/377 (51%), Gaps = 43/377 (11%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL--G 88
N +L+ A L + LF M +D+V++ A+I+G+S A+ ++ +L+
Sbjct: 76 NALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSS 135
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR------- 141
++P++ T+S+++ A+ A D G+Q H L+ G+ N +VGS L+DMYA+
Sbjct: 136 VRPSRITMSTMVMAASA-LGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDA 194
Query: 142 ---FDQMD---------------------DAWFLFTALESKNEVSWNALIAGHARKSEGE 177
FD++D +A LF + ++ ++W ++ G +
Sbjct: 195 KRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLES 254
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M +G +++ S+ TA + +LEQGK +HA++I++ FVG+ LV
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY+K SI+ AE VF R+ ++++SW +++ G Q+G + VR F +M R+GI P+
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKF 353
T V+++C++ L+EG + L G+ HY+T V L G+ G ++ A +
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGL----MHYITVSNALVTLYGKCGSIEDAHRL 430
Query: 354 IREMPIEPTAAVWGALL 370
EM + W AL+
Sbjct: 431 FDEMSFHDQVS-WTALV 446
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 158/276 (57%), Gaps = 3/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L++ + +HA+I+ + + +++ + + +++ Y+KC + A +F M K++++W
Sbjct: 282 CGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISW 341
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALI GY QN E A+ +FS+M R G+ P+ +TL SV+ + A+ ++ G Q H L
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEE-GAQFHCLAL 400
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++DA LF + ++VSW AL++G+A+ ++ +
Sbjct: 401 VSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETID 460
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML +G +P ++ V +A + G +E+G+ + H+ G + ++D+Y
Sbjct: 461 LFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++SG +++AE+ ++ + D + W ++L+ C G
Sbjct: 521 SRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 49/348 (14%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ AL+S ++ +P A L +LR L P + L+ +L A G K GR A
Sbjct: 9 YAALLSAAART-EPHVAGALHCVILRTLPHPPPTYLLNHLLTAYG------KAGRHARA- 60
Query: 120 CLKYGYDW----NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+ +D N++ ++LL A + D LF ++ ++ VS+NA+IAG +
Sbjct: 61 --RRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGS 118
Query: 176 GEKALRTFSEMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+A+R + +L+ P+ + S++ A ++ G GK H +++ G AFVG
Sbjct: 119 HAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVG 178
Query: 234 NTLVDMYAKSG-------------------------------SIEDAEKVFNRLLKRDVV 262
+ LVDMYAK +E+A ++F + RD +
Sbjct: 179 SPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSI 238
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
+W +M+TG Q+GL + F +M GIA +Q TF +LTAC L++G+ A +
Sbjct: 239 TWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI 298
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + VD+ + + A R M + + W AL+
Sbjct: 299 IRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS-WTALI 345
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/566 (39%), Positives = 361/566 (63%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++ L R +H + + ++F ++ + N +L+ Y+K G L+ A ++F+ M + +V+W
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY++ + ++ LF +M + G+ P+ FT++++L A + G+ VH +
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN-GKDVHNYIK 379
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ +++V ++L+DMYA+ M DA +F+ ++ K+ VSWN +I G+++ S +AL
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM + +P + + + A AS +LE+G+ +H H++++G L V N LVDMY
Sbjct: 440 LFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYL 498
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A +F+ + ++D+VSW M+ G HG G + F +M +GI P++V+F+
Sbjct: 499 KCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFIS 558
Query: 302 VLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLLDEG G+F +M+ + +EP+ HY VDLL RAG L +A KFI+ MPIE
Sbjct: 559 ILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIE 618
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR++ +V+L AE +FEL+P ++G ++LLANIYA A + + + R
Sbjct: 619 PDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLR 678
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ + G++K P CSW+E K VH+FV D +HP I ++ ++K+ G+ P
Sbjct: 679 ERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMR 738
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L AD E+E L HSEK+A+AF ++S PPG T+ + KN+RVCGDCH KF SK+V
Sbjct: 739 YALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMV 798
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+II+RD+NRFHHF+DG CSC +W
Sbjct: 799 KRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 201/390 (51%), Gaps = 31/390 (7%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE------------------ARKL 49
L+E R I + + N ++N YAK G E ARKL
Sbjct: 152 LREGR----RIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKL 207
Query: 50 FDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD 109
FDE+ +D+++W ++ISGY N E + LF QML LG+ + T+ SV+ AG ++
Sbjct: 208 FDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVV----AGCSN 263
Query: 110 DK---FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
GR +H + +K + + + + LLDMY++ ++ A +F + ++ VSW ++
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323
Query: 167 IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
IAG+AR+ + ++R F EM +EG P F+ +++ A A TG LE GK VH ++ ++
Sbjct: 324 IAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
Q FV N L+DMYAK GS+ DA VF+ + +D+VSWN+M+ G +++ L + F +
Sbjct: 384 QSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVE 443
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
M N PN +T C+L AC+ L+ GQ + ++G + VD+ + G
Sbjct: 444 MQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGA 502
Query: 347 LDRALKFIREMPIEPTAAVWGALLGACRMH 376
L A + + +M E W ++ MH
Sbjct: 503 LGLA-RLLFDMIPEKDLVSWTVMIAGYGMH 531
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 50/309 (16%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA- 171
GR++H+ + + +GS L+ MY + + +F + ++ WN L+ G+A
Sbjct: 120 GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179
Query: 172 -------------------RKSE-----------------------------GEKALRTF 183
R+ E EK L F
Sbjct: 180 IGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLF 239
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+ML G + SV ++TG L G+ +H + IK+ + N L+DMY+KS
Sbjct: 240 EQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKS 299
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G++ A +VF + +R VVSW SM+ G A+ GL +VR F +M + GI+P+ T +L
Sbjct: 300 GNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTIL 359
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC+ GLL+ G+ +K++ ++ + +D+ + G + A EM ++
Sbjct: 360 HACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIV 419
Query: 364 AVWGALLGA 372
+ W ++G
Sbjct: 420 S-WNTMIGG 427
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 94/244 (38%), Gaps = 52/244 (21%)
Query: 180 LRTFSEMLREGFEP--THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
LR E++ + +P +Y SV A S++ G+ +H+ + + ++ +G+ LV
Sbjct: 84 LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ------------------------ 273
MY G + + ++F+++ V WN ++ G A+
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 274 -------------------------HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
+GL + + FE+ML GI + T + V+ CS+
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G+L G+ K E +D+ ++G L+ A++ M E + W +
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTS 322
Query: 369 LLGA 372
++
Sbjct: 323 MIAG 326
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/559 (42%), Positives = 352/559 (62%), Gaps = 3/559 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E + +H H F +D QNT++N Y+ CGCL ARK+FD+M K +V+W +I ++
Sbjct: 103 EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHA 162
Query: 70 QNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
Q DQP A+ LF +M++ +KPN+ TL +VL A A A D +++H + ++G+ +
Sbjct: 163 QWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTAC-ARARDLAMVKRIHEYIDEHGFGRH 221
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V + + L+D+Y + + A LF + KN SWN +I GH S E+AL F EM
Sbjct: 222 VVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQT 281
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
+G + + +S+ A G+LE GKW+HA++ K + +G LVDMYAK GSIE
Sbjct: 282 KGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIET 341
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A +VF+ + ++DV++W +++ G A G + +++F++M G+ P+ +TF+ VL ACSH
Sbjct: 342 AIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSH 401
Query: 309 AGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
AG +DEG +F M +G++P HY VD+LGRAG + A + I+ MP+ P V G
Sbjct: 402 AGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLG 461
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
LLGACR+H N+E AA+++ E+DP+ SG ++LL+NIY S+ + +A R R++M E G
Sbjct: 462 GLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERG 521
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD 487
++K P CS +E VH FV D +H Q + I++ ++ K+K GYVPD S VL
Sbjct: 522 MRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMA 581
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++E+E +L +HSEKLA+AF L+ST G+ I + KN+R+C DCHSA K SK+ REIIVR
Sbjct: 582 EEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVR 641
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D NRFHHF+DG CSC +W
Sbjct: 642 DRNRFHHFKDGTCSCRGFW 660
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 153/290 (52%), Gaps = 5/290 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +H +I F + + +++ Y KCGC+ AR LFD+ K++ +W
Sbjct: 197 CARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSW 256
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+I+G+ ++ E A++LF +M G+K ++ T++S+L A + GA + G+ +HA+
Sbjct: 257 NIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALE--LGKWLHAYI 314
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K D +V +G++L+DMYA+ ++ A +F + K+ ++W ALI G A + E AL
Sbjct: 315 KKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENAL 374
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM +G +P ++ V A + G +++G ++ G Q LVD+
Sbjct: 375 QYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDI 434
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
++G I +AE++ + + D +L C HG +A R +++L
Sbjct: 435 LGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLL 484
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 159/356 (44%), Gaps = 47/356 (13%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ--MDDAWFLFTALESKNEVSWNALIAGHA 171
+Q+HA L+ G ++ + S ++ + + + A +F+ + + + N++I G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
K+ ++AL + EM+ +G P +++ S+F + ++ +GK +H H K G +
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTY 121
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN- 290
NTL++MY+ G + A KVF+++ + VVSW +M+ AQ VR F++M+++
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG----- 345
+ PN+VT + VLTAC+ A L + + +HG +D+ + G
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241
Query: 346 --LLDR------------------------ALKFIREMP---IEPTAAVWGALLGACRMH 376
L D+ AL REM I+ +LL AC
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301
Query: 377 KNVELG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ELG AY ++ ++ D L ++YA G + A + M E V
Sbjct: 302 GALELGKWLHAYIKKQRIDV---DVALGTALVDMYAKCGSIETAIQVFHEMPEKDV 354
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA--KSGSIEDAEKVFNRLLKRDVVSWNSML 268
+ Q K +HA ++++G F + +V + +SGS++ A VF+++ + NS++
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
GC L + + ++++M+ G+ P++ TF + +C ++ EG+ K G
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFA 117
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
+ T +++ G L A K +M + T W ++G +H + A R
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKME-DKTVVSWATMIG---VHAQWDQPNEAV-R 172
Query: 389 IFE--LDPHDSGPH-ILLANIYASAGRLNDAARARKM 422
+F+ + + P+ + L N+ + R D A +++
Sbjct: 173 LFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRI 209
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/554 (42%), Positives = 346/554 (62%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + + + + +L+ YAKCG +++AR F+ + D++ W+ +IS Y+Q +Q
Sbjct: 654 IHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQ 713
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A LF +M+R + PN+F+LSSVL+A D G+Q+H +K G++ ++VG+
Sbjct: 714 NEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLD-LGKQIHNHAIKIGHESELFVGN 772
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D+YA+ M+ + +F++L NEVSWN +I G+++ GE AL F EM
Sbjct: 773 ALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPS 832
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T +YSSV A AST S+ VH + KS V N+L+D YAK G I DA ++F
Sbjct: 833 TQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIF 892
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
L + D+VSWN++++G A HG F+ M +N I N +TF+ +L+ C GL+
Sbjct: 893 ETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVS 952
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G F M+ HG+EP HY V LLGRAG L+ AL FI ++P P+A VW ALL +
Sbjct: 953 QGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSS 1012
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C +HKNVELG ++AE++ E++P D ++LL+N+Y++AG L+ A RK M+ GV+KEP
Sbjct: 1013 CIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEP 1072
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWVE K VH F + HP +I+ ++ K + GYVPD+ VL +++++
Sbjct: 1073 GLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKV 1132
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L VHSE+LALA+ L+ TPPG I I KN+R C DCH+ FK SK+V++EIIVRD NRF
Sbjct: 1133 RMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRF 1192
Query: 553 HHFRDGFCSCGDYW 566
HHF +G CSCGDYW
Sbjct: 1193 HHFEEGTCSCGDYW 1206
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 197/362 (54%), Gaps = 6/362 (1%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+ +++AY+ CG + +AR++FD + KD V WTA++S YS+ND PEN + +FS+M K
Sbjct: 570 SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSK 629
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N F L+SVL+A+ + G+ +HA +K YD +V +LLDMYA+ ++DA
Sbjct: 630 LNPFALTSVLRAA-VCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARL 688
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F + + + + W+ +I+ +A+ ++ E+A F M+R P FS SSV A A+
Sbjct: 689 AFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPL 748
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L+ GK +H H IK G + FVGN L+D+YAK +E + ++F+ L + VSWN+++ G
Sbjct: 749 LDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVG 808
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
++ G G+A + F +M + QVT+ VL AC+ ++ L++K +
Sbjct: 809 YSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSD 868
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ +D + G + R + I E E W A++ +H A A+ +F
Sbjct: 869 TIVSNSLIDSYAKCGCI-RDAREIFETLKECDLVSWNAIISGYAVHGQ----AAMAQELF 923
Query: 391 EL 392
++
Sbjct: 924 DM 925
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 181/360 (50%), Gaps = 7/360 (1%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C + R VH H++ G + D+ N +LN Y K G A ++FD +P ++MV
Sbjct: 438 CVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMV 497
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ--VH 117
++ L+ G++ + E A LF ++ G + NQF L++VLK A D G VH
Sbjct: 498 SFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAM---DTLGLAWGVH 554
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A K G+D N +VGS+L+D Y+ + DA +F + K+ V+W A+++ ++ E
Sbjct: 555 ACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPE 614
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
L+ FS+M + F+ +SV A S+ GK +HA +K+ V L+
Sbjct: 615 NTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALL 674
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK G+IEDA F + DV+ W+ M++ AQ + F +M+R+ ++PN+
Sbjct: 675 DMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEF 734
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ VL AC++ LLD G+ K G E E +DL + ++ +L+ +
Sbjct: 735 SLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSL 794
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 164/335 (48%), Gaps = 12/335 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L + +H H + ++++ + N +++ YAKC ++ + ++F + + V+W
Sbjct: 743 CANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSW 802
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GYS++ E A+ +F +M + Q T SSVL+A + A+ + G QVH
Sbjct: 803 NTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVG-QVHCLIE 861
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ + V +SL+D YA+ + DA +F L+ + VSWNA+I+G+A + A
Sbjct: 862 KSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQE 921
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F M + + ++ ++ + STG + QG + + G + T +V +
Sbjct: 922 LFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLL 981
Query: 241 AKSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNGIAP-N 295
++G + DA + + W ++L+ C H LG+ + EK+L I P +
Sbjct: 982 GRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSA---EKVLE--IEPQD 1036
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ T++ + S AG LD+ + M+ GV E
Sbjct: 1037 ETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKE 1071
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 196/462 (42%), Gaps = 28/462 (6%)
Query: 109 DDKFGRQVHAFCLKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
D + GR VH ++ G +++ + LL+MY + A +F L +N VS+ L
Sbjct: 443 DARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTL 502
Query: 167 IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
+ GHA + E E+A F + EG E F ++V + + +L VHA K G
Sbjct: 503 VQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGH 562
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
AFVG+ L+D Y+ G + DA +VF+ ++ +D V+W +M++ +++ + T++ F K
Sbjct: 563 DRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSK 622
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
M N VL A + G+G A K + E Y +D+ + G
Sbjct: 623 MRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGN 682
Query: 347 LDRALKFIREMPIEPTAAVWGALLGA-CRMHKNVELGAYAAERIFELDPHDSGPHILLAN 405
++ A + EM +W ++ + ++N E+ FEL ++ ++
Sbjct: 683 IEDA-RLAFEMVTNDDVILWSLMISRYAQCNQN--------EQAFEL-----FIRMMRSS 728
Query: 406 IYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND--DAHPQRAMIHKKW 463
+ + L+ +A M + K+ ++ + +FV N D + + + +
Sbjct: 729 VSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSL 788
Query: 464 REISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNI 523
EI ++ + V ++ ++ Y+ EA L V E A ++ P + + +
Sbjct: 789 -EIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRA------ASVPSTQVTYSSVL 841
Query: 524 RVCGDCHSAFKFASK--VVEREIIVRDTNRFHHFRDGFCSCG 563
R C S ++E+ DT + D + CG
Sbjct: 842 RACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCG 883
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++Y+ + + G G+ VH HV++SGG +L F N L++MY K G A +VF
Sbjct: 429 YAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVF 488
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
+ L +R++VS+ +++ G A G + F+++ G NQ VL
Sbjct: 489 DGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 351/566 (62%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L R +H + + F ++ NT+L+ Y+KCG L++A + F++M K +V+W
Sbjct: 664 CANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSW 723
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+ Y + ++AI LF +M G+ P+ ++++SVL A G + DK GR VH +
Sbjct: 724 TSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDK-GRDVHNYIR 782
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + V ++L+DMYA+ M++A+ +F+ + K+ VSWN +I G+++ S +AL+
Sbjct: 783 KNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALK 842
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM +E P + + + A S +LE G+ +H ++++G V N L+DMY
Sbjct: 843 LFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYV 901
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A +F+ + ++D+++W M++GC HGLG + F+KM GI P+++TF
Sbjct: 902 KCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTS 961
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL+EG G+F +++ + +EP+ HY VDLL R G L +A I MPI+
Sbjct: 962 ILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIK 1021
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR+H +VEL AE +FEL+P ++G ++LLANIYA A + + + R
Sbjct: 1022 PDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLR 1081
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ + + G+KK P CSW+E + FV+ D AHPQ I + K+K G+ P
Sbjct: 1082 ERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMR 1141
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L A E+E L HSEKLA+AF +++ P G TI + KN+RVC DCH KF SK
Sbjct: 1142 YALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTT 1201
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD+NRFHHF+DGFCSC D+W
Sbjct: 1202 RREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 11/376 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-T 60
C K L+E ++VH+ I + + + ++ Y CG L E R++FD + + V
Sbjct: 461 CAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFL 520
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG--RQVHA 118
W ++S Y++ +I LF +M +LG+ N +T S +LK AT + G +++H
Sbjct: 521 WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCF---ATLGRVGECKRIHG 577
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G+ V +SL+ Y + ++D A LF L ++ VSWN++I+G
Sbjct: 578 CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHS 637
Query: 179 ALRTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F +ML R G + S A A+ GSL G+ +H +K+ NTL
Sbjct: 638 ALEFFVQMLILRVGVDLATLVNS--VAACANVGSLSLGRALHGQGVKACFSREVMFNNTL 695
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+DMY+K G++ DA + F ++ ++ VVSW S++ + GL +R F +M G++P+
Sbjct: 696 LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+ VL AC+ LD+G+ ++K+ + +D+ + G ++ A +
Sbjct: 756 YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQ 815
Query: 357 MPIEPTAAVWGALLGA 372
+P++ + W ++G
Sbjct: 816 IPVKDIVS-WNTMIGG 830
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 161/348 (46%), Gaps = 24/348 (6%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ +T + A+AK LDE K+ V D+ L+ +++ NA +S +L
Sbjct: 405 DVPRSSTRVGAFAK---LDENTKICKFCEVGDLRNAVELLRMSQKSELDLNA---YSSIL 458
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+L + + G+ VH+ G +G+ L+ MY +
Sbjct: 459 QLCAEHKCL----------------QEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGAL 502
Query: 146 DDAWFLFTALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ +F + S N+V WN +++ +A+ + +++ F +M + G +++S +
Sbjct: 503 REGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKC 562
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+ G + + K +H V K G V N+L+ Y KSG ++ A K+F+ L RDVVSW
Sbjct: 563 FATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSW 622
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
NSM++GC +G + + +F +ML + + T + + AC++ G L G+ K
Sbjct: 623 NSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVK 682
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E T +D+ + G L+ A++ +M + T W +L+ A
Sbjct: 683 ACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAA 729
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/548 (43%), Positives = 350/548 (63%), Gaps = 4/548 (0%)
Query: 22 AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILF 81
F ++ + + + + Y+KCG L EA ++FD+MP KD V WTA+I GY++N E A++ F
Sbjct: 71 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 130
Query: 82 SQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
M R GL +Q SVL ASG G D + +H K G++ V V ++L+DMYA
Sbjct: 131 RDMKREGLVGADQHVFCSVLSASG-GLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 189
Query: 141 RFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
+ ++ A + N VS ++I G+ E+AL + E+ R+G EP F++S
Sbjct: 190 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 249
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A LEQG +HA VIK+ +FVG+TLVDMY K G I + ++FN + R
Sbjct: 250 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 309
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
++WN+++ AQHG G+ ++ F++M+ +GI PN + F+ +LTACSHAGL+DEG YF
Sbjct: 310 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 369
Query: 320 ALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
MK+ HG+EP+E HY +D GRAG LD A KFI EMPI+P A W +LLGACRM +
Sbjct: 370 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 429
Query: 379 VELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVE 438
ELG AA+ + +L+P ++G H+ L+ IYAS G+ D RK+M++S +KK P SWV+
Sbjct: 430 KELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 489
Query: 439 TKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH 498
+ H+F + D +HPQ+ I++K E++ +IK+ GY+PD+S + + +E L+ H
Sbjct: 490 SNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYH 549
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
SE++A+AFALIS P I +KKN+R+C DCH+AFKF KV R+IIVRD +RFHHF +G
Sbjct: 550 SERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNG 609
Query: 559 FCSCGDYW 566
CSCGDYW
Sbjct: 610 RCSCGDYW 617
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 174/333 (52%), Gaps = 18/333 (5%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
MP ++ V+WT L+SG SQN +A+ F+ M R G+ P +F LSS +A+ A
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
Q+H ++ G+D ++V S+L DMY++ + +A +F + K+ V+W A+I G+A+
Sbjct: 61 -AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVF-TALASTGSLEQG---KWVHAHVIKSGGQL 228
E A+ +F +M REG VF + L+++G L+ G K +H V K+G +L
Sbjct: 120 NGSLEAAVLSFRDMKREGLVGAD---QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 176
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN-----SMLTGCAQHGLGKATVRW 283
V N L+DMYAKS +E A +R+LK D WN SM+ G + + +
Sbjct: 177 EVAVRNALIDMYAKSMDVESA----SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 232
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
+ ++ R G+ PN+ TF ++ C+ LL++G A + K + + T VD+ G+
Sbjct: 233 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 292
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
GL+ +++ E+ T W A++ H
Sbjct: 293 CGLISLSMQLFNEIEYR-TDIAWNAVINVFAQH 324
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 152/268 (56%), Gaps = 4/268 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVTWTALISGYS 69
++ +H + + F+ ++A++N +++ YAK ++ A ++ P ++V+ T++I GY
Sbjct: 162 SKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYI 221
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+ D E A++++ ++ R G++PN+FT SS++K A ++ G Q+HA +K +
Sbjct: 222 ETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQ-GAQLHAQVIKTDLIRDS 280
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VGS+L+DMY + + + LF +E + +++WNA+I A+ G +A++ F M+
Sbjct: 281 FVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYS 340
Query: 190 GFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P H ++ S+ TA + G +++G K+ ++ G + + ++D Y ++G +++
Sbjct: 341 GIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDE 400
Query: 249 AEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
A K + + +K + W S+L C G
Sbjct: 401 AYKFISEMPIKPNAYGWCSLLGACRMRG 428
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ +N VSW L++G ++ AL F+ M R G PT F+ SS A A+ G+ G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+H ++ G FV + L DMY+K G + +A +VF+++ ++D V+W +M+ G A++
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 275 GLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEG---QGYFALMKKHGVEPE 330
G +A V F M R G + +Q F VL+A +G L +G + + K G E E
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELE 177
Query: 331 EAHYVTFVDLLGRAGLLD---RALKF--------------------------------IR 355
A +D+ ++ ++ R LK +R
Sbjct: 178 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 237
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASAGRLN 414
+EP + +++ C M +E GA ++ + D DS L ++Y G ++
Sbjct: 238 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ +HA ++ + D + +T+++ Y KCG + + +LF+E+ + + W
Sbjct: 255 CAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAW 314
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ ++Q+ AI F +M+ G++PN S+L A D+ + ++
Sbjct: 315 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKE 374
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
+G + S ++D Y R ++D+A+ + + K N W +L+ K GE
Sbjct: 375 AHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGE 434
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALA 206
A + + L G H S S ++ +L
Sbjct: 435 VAAQNLMK-LEPGNTGIHVSLSGIYASLG 462
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/560 (42%), Positives = 344/560 (61%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E + +H H F +D +QNT++N Y+ CGCL ARK+FD+M K +V+W +I
Sbjct: 153 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q D P AI LF +M +KPN+ TL +VL A A + D + +QVH + + G +
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTAC-ARSRDLETAKQVHKYIDETGIGF 271
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ + S+L+D+Y + A LF + KN WN +I GH S+ E+AL F+EM
Sbjct: 272 HTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ 331
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G + + +S+ A G+LE GKW+H ++ K ++ +G LVDMYAK GSIE
Sbjct: 332 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 391
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +VF + ++DV++W +++ G A G G + F +M + + P+ +TF+ VL ACS
Sbjct: 392 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 451
Query: 308 HAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
HAGL++EG YF M K+G++P HY VD+LGRAG + A I+ MP+ P V
Sbjct: 452 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 511
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
LL ACR+H N+ + AA+++ ELDP + G ++LL+NIY+S A + R++M E
Sbjct: 512 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 571
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
+KK P CS +E VH FV D +HPQ + I++ ++ ++K GYVPD S VL
Sbjct: 572 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDM 631
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D++E+E +L +HSEKLA+AF L+ST PG+ I + KN+RVC DCHSA KF S+V REIIV
Sbjct: 632 DEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIV 691
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFHHF G CSC D+W
Sbjct: 692 RDRNRFHHFTKGSCSCRDFW 711
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 190/372 (51%), Gaps = 10/372 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDM 58
KCT + +LK+ +HA +L + D + I+ A G L AR +F+++P
Sbjct: 49 KCTTMSQLKQ---IHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTT 105
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
T ++I GY+ + P AI+ + M+ GL P++FT S+ K+ G G+Q+H
Sbjct: 106 FTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE----GKQLHC 161
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G+ + Y+ ++L++MY+ + A +F + +K+ VSW +I +A+ +
Sbjct: 162 HSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHE 221
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A++ F M +P + +V TA A + LE K VH ++ ++G + + L+D
Sbjct: 222 AIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMD 281
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G A +FN++ ++++ WN M+ G + + + F +M +G+ ++VT
Sbjct: 282 VYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 341
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+L AC+H G L+ G+ ++K +E + A VD+ + G ++ A++ +EMP
Sbjct: 342 MASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP 401
Query: 359 IEPTAAVWGALL 370
E W AL+
Sbjct: 402 -EKDVMTWTALI 412
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 146/277 (52%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ A+ VH +I + + + +++ Y KCGC AR LF++MP K++ W
Sbjct: 248 CARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCW 307
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+I+G+ ++ E A+ LF++M G+K ++ T++S+L A + GA + G+ +H +
Sbjct: 308 NIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALE--LGKWLHVYI 365
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K + +V +G++L+DMYA+ ++ A +F + K+ ++W ALI G A +G KAL
Sbjct: 366 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKAL 425
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDM 239
F EM +P ++ V A + G + +G + ++ K G Q +VDM
Sbjct: 426 ELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDM 485
Query: 240 YAKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQHG 275
++G I +AE + N + D +L+ C HG
Sbjct: 486 LGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 522
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTHL L+ + +H +I + D+A+ +++ YAKCG ++ A ++F EMP KD++TW
Sbjct: 349 CTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW 408
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TALI G + Q A+ LF +M +KP+ T VL A S AG ++ ++
Sbjct: 409 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA-YFNSMP 467
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA------------WFLFTALESKNEVSWNALIA 168
KYG ++ ++DM R ++ +A +F+ L S + N ++A
Sbjct: 468 NKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVA 527
Query: 169 GHA 171
A
Sbjct: 528 ERA 530
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/547 (44%), Positives = 350/547 (63%), Gaps = 4/547 (0%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F ++ + + + + Y+KCG L EA ++FD+MP KD V WTA+I GY++N E A++ F
Sbjct: 302 FDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR 361
Query: 83 QMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
M R GL +Q SVL ASG G D + +H K G++ V V ++L+DMYA+
Sbjct: 362 DMKREGLVGADQHVFCSVLSASG-GLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 420
Query: 142 FDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
++ A + N VS ++I G+ E+AL + E+ R+G EP F++SS
Sbjct: 421 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 480
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ A LEQG +HA VIK+ +FVG+TLVDMY K G I + ++FN + R
Sbjct: 481 MIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRT 540
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
++WN+++ AQHG G+ ++ F++M+ +GI PN + F+ +LTACSHAGL+DEG YF
Sbjct: 541 DIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFY 600
Query: 321 LMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
MK+ HG+EP+E HY +D GRAG LD A KFI EMPI+P A W +LLGACRM +
Sbjct: 601 SMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSK 660
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
ELG AA+ + +L+P ++G H+ L+ IYAS G+ D RK+M++S +KK P SWV++
Sbjct: 661 ELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDS 720
Query: 440 KNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
H+F + D +HPQ+ I++K E++ +IK+ GY+PD+S + + +E L+ HS
Sbjct: 721 NKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHS 780
Query: 500 EKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
E++A+AFALIS P I +KKN+R+C DCH+AFKF KV R+IIVRD +RFHHF +G
Sbjct: 781 ERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGR 840
Query: 560 CSCGDYW 566
CSCGDYW
Sbjct: 841 CSCGDYW 847
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 199/399 (49%), Gaps = 20/399 (5%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C L+ R++HA +L A + N ++ Y+ C L A +LF MP ++ V+
Sbjct: 180 CGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVS 239
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L+SG SQN +A+ F+ M R G+ P +F LSS +A+ A R A
Sbjct: 240 WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAA-AALGAPLRARSCTA-S 297
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G+D ++V S+L DMY++ + +A +F + K+ V+W A+I G+A+ E A+
Sbjct: 298 ASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAV 357
Query: 181 RTFSEMLREGFEPTHFSYSSVF-TALASTGSLEQG---KWVHAHVIKSGGQLVAFVGNTL 236
+F +M REG VF + L+++G L+ G K +H V K+G +L V N L
Sbjct: 358 LSFRDMKREGLVGAD---QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNAL 414
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWN-----SMLTGCAQHGLGKATVRWFEKMLRNG 291
+DMYAKS +E A +R+LK D WN SM+ G + + + + ++ R G
Sbjct: 415 IDMYAKSMDVESA----SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 470
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ PN+ TF ++ C+ LL++G A + K + + T VD+ G+ GL+ ++
Sbjct: 471 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 530
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ E+ T W A++ H + A +R+
Sbjct: 531 QLFNEIEYR-TDIAWNAVINVFAQHGHGREAIQAFDRMI 568
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 212/503 (42%), Gaps = 95/503 (18%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C L+ R++HA +L A + N ++ Y+ C L A +LF MP ++ V+
Sbjct: 30 CGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVS 89
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT------------------------- 95
WT L+SG SQN +A+ F+ M R G+ P +
Sbjct: 90 WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPT 149
Query: 96 -----------------------LSSVLKASGAGATDDKFGRQVHA-FCLKYGYDWNVYV 131
L+S+L++ G A D + GR +HA L + ++
Sbjct: 150 LMVKYWGQRLWRPPAPAAATTVHLASLLQSCGR-AGDLRRGRLLHARLVLSGAAAASTFL 208
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+ L+ MY+ + A LF A+ +N VSW L++G ++ AL F+ M R G
Sbjct: 209 ANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGV 268
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
PT F+ SS A A+ G+ + + A G FV + L DMY+K G + +A +
Sbjct: 269 APTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACR 327
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAG 310
VF+++ ++D V+W +M+ G A++G +A V F M R G + +Q F VL+A +G
Sbjct: 328 VFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SG 384
Query: 311 LLDEG---QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD---RALKF----------- 353
L +G + + K G E E A +D+ ++ ++ R LK
Sbjct: 385 GLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGT 444
Query: 354 ---------------------IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
+R +EP + +++ C M +E GA ++ +
Sbjct: 445 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 504
Query: 393 D-PHDSGPHILLANIYASAGRLN 414
D DS L ++Y G ++
Sbjct: 505 DLIRDSFVGSTLVDMYGKCGLIS 527
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 135/325 (41%), Gaps = 53/325 (16%)
Query: 96 LSSVLKASGAGATDDKFGRQVHA-FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
L+S+L++ G A D + GR +HA L + ++ + L+ MY+ + A LF A
Sbjct: 23 LASLLQSCGR-AGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAA 81
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF------------ 202
+ +N VSW L++G ++ AL F+ M R G PT Y + F
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAA 141
Query: 203 -----------------------TALAST-------------GSLEQGKWVHAHVIKSGG 226
A A+T G L +G+ +HA ++ SG
Sbjct: 142 SHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGA 201
Query: 227 QLVA-FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ F+ N L+ MY+ + A ++F + +R+ VSW ++++G +Q+ + + F
Sbjct: 202 AAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFA 261
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
M R G+AP + A + G + A G + E D+ + G
Sbjct: 262 AMRRAGVAPTRFALSSAARAAAALGAPLRARSCTA-SASVGFDTELFVASNLADMYSKCG 320
Query: 346 LLDRALKFIREMPIEPTAAVWGALL 370
LL A + +MP + A W A++
Sbjct: 321 LLSEACRVFDQMP-QKDAVAWTAMI 344
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ +HA ++ + D + +T+++ Y KCG + + +LF+E+ + + W
Sbjct: 485 CAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAW 544
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I+ ++Q+ AI F +M+ G++PN S+L A S AG D+
Sbjct: 545 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG--------- 595
Query: 121 LKYGYDWNVYVG--------SSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG-- 169
LKY Y G S ++D Y R ++D+A+ + + K N W +L+
Sbjct: 596 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACR 655
Query: 170 -HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
K GE A + + L G H S S ++ +L
Sbjct: 656 MRGSKELGEVAAQNLMK-LEPGNTGIHVSLSGIYASL 691
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-FVGNTLVDMYAKSGSIEDAEKV 252
T +S+ + G L +G+ +HA ++ SG + F+ N L+ MY+ + A ++
Sbjct: 19 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
F + +R+ VSW ++++G +Q+ + + F M R G+AP ++ +
Sbjct: 79 FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/548 (43%), Positives = 350/548 (63%), Gaps = 4/548 (0%)
Query: 22 AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILF 81
F ++ + + + + Y+KCG L EA ++FD+MP KD V WTA+I GY++N E A++ F
Sbjct: 152 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 211
Query: 82 SQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
M R GL +Q SVL ASG G D + +H K G++ V V ++L+DMYA
Sbjct: 212 RDMKREGLVGADQHVFCSVLSASG-GLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 270
Query: 141 RFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
+ ++ A + N VS ++I G+ E+AL + E+ R+G EP F++S
Sbjct: 271 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 330
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A LEQG +HA VIK+ +FVG+TLVDMY K G I + ++FN + R
Sbjct: 331 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 390
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
++WN+++ AQHG G+ ++ F++M+ +GI PN + F+ +LTACSHAGL+DEG YF
Sbjct: 391 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 450
Query: 320 ALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
MK+ HG+EP+E HY +D GRAG LD A KFI EMPI+P A W +LLGACRM +
Sbjct: 451 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 510
Query: 379 VELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVE 438
ELG AA+ + +L+P ++G H+ L+ IYAS G+ D RK+M++S +KK P SWV+
Sbjct: 511 KELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 570
Query: 439 TKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH 498
+ H+F + D +HPQ+ I++K E++ +IK+ GY+PD+S + + +E L+ H
Sbjct: 571 SNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYH 630
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
SE++A+AFALIS P I +KKN+R+C DCH+AFKF KV R+IIVRD +RFHHF +G
Sbjct: 631 SERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNG 690
Query: 559 FCSCGDYW 566
CSCGDYW
Sbjct: 691 RCSCGDYW 698
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 203/399 (50%), Gaps = 19/399 (4%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C L+ R++HA +L A + N ++ Y+ C L A +LF MP ++ V+
Sbjct: 30 CGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVS 89
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L+SG SQN +A+ F+ M R G+ P +F LSS +A+ A G Q+H
Sbjct: 90 WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAA-AALGAPLPGAQLHCVG 148
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G+D ++V S+L DMY++ + +A +F + K+ V+W A+I G+A+ E A+
Sbjct: 149 VRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAV 208
Query: 181 RTFSEMLREGFEPTHFSYSSVF-TALASTGSLEQG---KWVHAHVIKSGGQLVAFVGNTL 236
+F +M REG VF + L+++G L+ G K +H V K+G +L V N L
Sbjct: 209 LSFRDMKREGLVGAD---QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNAL 265
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWN-----SMLTGCAQHGLGKATVRWFEKMLRNG 291
+DMYAKS +E A +R+LK D WN SM+ G + + + + ++ R G
Sbjct: 266 IDMYAKSMDVESA----SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 321
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ PN+ TF ++ C+ LL++G A + K + + T VD+ G+ GL+ ++
Sbjct: 322 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 381
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ E+ T W A++ H + A +R+
Sbjct: 382 QLFNEIEYR-TDIAWNAVINVFAQHGHGREAIQAFDRMI 419
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 45/360 (12%)
Query: 96 LSSVLKASGAGATDDKFGRQVHA-FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
L+S+L++ G A D + GR +HA L + ++ + L+ MY+ + A LF A
Sbjct: 23 LASLLQSCGR-AGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAA 81
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ +N VSW L++G ++ AL F+ M R G PT F+ SS A A+ G+ G
Sbjct: 82 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 141
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+H ++ G FV + L DMY+K G + +A +VF+++ ++D V+W +M+ G A++
Sbjct: 142 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 201
Query: 275 GLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEG---QGYFALMKKHGVEPE 330
G +A V F M R G + +Q F VL+A +G L +G + + K G E E
Sbjct: 202 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELE 258
Query: 331 EAHYVTFVDLLGRAGLLD---RALKF--------------------------------IR 355
A +D+ ++ ++ R LK +R
Sbjct: 259 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 318
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASAGRLN 414
+EP + +++ C M +E GA ++ + D DS L ++Y G ++
Sbjct: 319 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 378
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ +HA ++ + D + +T+++ Y KCG + + +LF+E+ + + W
Sbjct: 336 CAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAW 395
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I+ ++Q+ AI F +M+ G++PN S+L A S AG D+
Sbjct: 396 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG--------- 446
Query: 121 LKYGYDWNVYVG--------SSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG-- 169
LKY Y G S ++D Y R ++D+A+ + + K N W +L+
Sbjct: 447 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACR 506
Query: 170 -HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
K GE A + + L G H S S ++ +L
Sbjct: 507 MRGSKELGEVAAQNLMK-LEPGNTGIHVSLSGIYASLG 543
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 355/563 (63%), Gaps = 7/563 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + E ++ H+ + + + + N ++N Y K L++A +LFD+MP +++++W
Sbjct: 23 CLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISW 82
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +IS YS+ + A+ L MLR G++PN +T SSVL+A G +D R +H +
Sbjct: 83 TTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN-GMSD---VRMLHCGII 138
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +VYV S+L+D++A+ + +DA +F + + + + WN++I G A+ S + AL
Sbjct: 139 KEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 198
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M R GF + +SV A LE G H H++K L+ + N LVDMY
Sbjct: 199 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYC 256
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VFN++ +RDV++W++M++G AQ+G + ++ FE M +G PN +T +
Sbjct: 257 KCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVG 316
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSHAGLL++G YF MKK +G+ P HY +DLLG+AG LD A+K + EM E
Sbjct: 317 VLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECE 376
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A W LLGACR+ +N+ L YAA+++ LDP D+G + +L+NIYA++ + + R
Sbjct: 377 PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIR 436
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M++ G+KKEP CSW+E +H F+ D++HPQ ++KK ++ ++ IGYVP+++
Sbjct: 437 KRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETN 496
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + ++ E L+ HSEKLALAF L++ P I I+KN+R+CGDCH K ASK+
Sbjct: 497 FVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLE 556
Query: 541 EREIIVRDTNRFHHFRDGFCSCG 563
R I++RD R+HHF+DG CSCG
Sbjct: 557 NRNIVIRDPIRYHHFQDGKCSCG 579
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 40/267 (14%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+YS + S ++ +G + H+ +G Q + F+ N L++MY K + DA ++F+++
Sbjct: 15 TYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQM 74
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+R+V+SW +M++ ++ + + + MLR+G+ PN T+ VL AC+ G+ D
Sbjct: 75 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN--GMSDVRM 132
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG----- 371
+ ++K+ G+E + +D+ + G + AL EM + A VW +++G
Sbjct: 133 LHCGIIKE-GLESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQN 190
Query: 372 ------------------------------ACRMHKNVELGAYAAERIFELDPHDSGPHI 401
AC +ELG A I + D D +
Sbjct: 191 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD-QDLILNN 249
Query: 402 LLANIYASAGRLNDAARARKMMKESGV 428
L ++Y G L DA R MKE V
Sbjct: 250 ALVDMYCKCGSLEDARRVFNQMKERDV 276
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/563 (41%), Positives = 349/563 (61%), Gaps = 3/563 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K L + +H + + +F N + + +L+ YAKC CL ARK+FD M V++ V+W+A+I
Sbjct: 224 KALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMI 283
Query: 66 SGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
GY +D + A+ LF QM L+ + P TL SVL+A A TD GR++H + +K G
Sbjct: 284 GGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC-AKLTDLSRGRKLHCYIIKLG 342
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ +G++LL MYA+ +DDA F + K+ VS++A+++G + AL F
Sbjct: 343 XVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFR 402
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G +P + V A + +L+ G H ++I G + N L+DMY+K G
Sbjct: 403 MMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCG 462
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
I A +VFNR+ + D+VSWN+M+ G HGLG + F +L G+ P+ +TF+C+L+
Sbjct: 463 KISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLS 522
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
+CSH+GL+ EG+ +F A+ + + P H + VD+LGRAGL+D A FIR MP EP
Sbjct: 523 SCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDV 582
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W ALL ACR+HKN+ELG +++I L P +G +LL+NIY++AGR +DAA R
Sbjct: 583 RIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQ 642
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
K+ G+KK P CSW+E VH FV D +H Q + I++K E+ ++K++GY + S V
Sbjct: 643 KDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVF 702
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+++E+E L HSEKLA+AF +++ G I + KN+RVCGDCH+A KF + + +RE
Sbjct: 703 QDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKRE 762
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I VRD NRFHHF++G C+CGD+W
Sbjct: 763 ITVRDANRFHHFKNGTCNCGDFW 785
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 204/398 (51%), Gaps = 9/398 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L EA+ +H H L + D ++ + + Y C + AR+LFDE+P ++ W
Sbjct: 18 CIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILW 77
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+I Y+ N + AI L+ ML LG++PN++T VLKA SG A +D G ++H+
Sbjct: 78 NQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED--GVEIHSHA 135
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+G + +V+V ++L+D YA+ + +A LF+++ ++ V+WNA+IAG + + A+
Sbjct: 136 KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAV 195
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ +M EG P + V + +L GK +H + ++ VG L+DMY
Sbjct: 196 QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMY 255
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTF 299
AK + A K+F+ + R+ VSW++M+ G K + F++M L++ + P VT
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTL 315
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL AC+ L G+ + K G + T + + + G++D A++F M
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM-- 373
Query: 360 EPTAAV-WGALLGACRMHKN--VELGAYAAERIFELDP 394
P +V + A++ C + N V L + ++ +DP
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 147/277 (53%), Gaps = 7/277 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +H +I+ DI + NT+L+ YAKCG +D+A + FD M KD V++
Sbjct: 322 CAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSF 381
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A++SG QN A+ +F M G+ P+ T+ VL A A + G H + +
Sbjct: 382 SAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAA-LQHGFCSHGYLI 440
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + + ++L+DMY++ ++ A +F ++ + VSWNA+I G+ G +AL
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 500
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGN--TLVD 238
F ++L G +P ++ + ++ + +G + +G+ W A + +V + + +VD
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDA--MSRDFSIVPRMEHCICMVD 558
Query: 239 MYAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQH 274
+ ++G I++A + N + DV W+++L+ C H
Sbjct: 559 ILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 140/309 (45%), Gaps = 2/309 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++H LK + + V L +Y +Q+ A LF + + + + WN +I +A
Sbjct: 28 KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN 87
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ A+ + ML G P ++Y V A + ++E G +H+H G + FV
Sbjct: 88 GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
LVD YAK G + +A+++F+ + RDVV+WN+M+ GC+ +GL V+ +M GI
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
PN T + VL A L G+ + + +D+ + L A K
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
M + + W A++G ++ +++ D D P + L ++ + +L
Sbjct: 268 FDVMGVRNEVS-WSAMIGGYVXSDCMKEALELFDQMILKDAMDPTP-VTLGSVLRACAKL 325
Query: 414 NDAARARKM 422
D +R RK+
Sbjct: 326 TDLSRGRKL 334
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y + A + SL + K +H H +K+ + V + L +Y + A ++F+ +
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
V+ WN ++ A +G + + ML G+ PN+ T+ VL ACS +++G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ K G+E + VD + G+L A + M A W A++ C ++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLY 188
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/577 (41%), Positives = 357/577 (61%), Gaps = 37/577 (6%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I+ N +++ Y + G + A F++MP +D+V+W ++ISGYSQ A+++FS+ML
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKML 266
Query: 86 -RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--- 141
LKP+ FTL+S+L A A G+Q+HA+ L+ + + VG++L+ MYA+
Sbjct: 267 NEPSLKPDNFTLASILSAC-ANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG 325
Query: 142 --------------------FDQMDDAWF----------LFTALESKNEVSWNALIAGHA 171
F + D + +F L ++ V+W A+I G+
Sbjct: 326 VEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ AL F M+ EG EP ++ +++ + +S LE GK +HA IK+G
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V N L+ MYAK+G+I A++VF+ K+++VSW SM+ AQHGLGK + FE+ML
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ P+ +T++ VL+AC+H GL+++G+ Y+ +M + H +EP +HY +DL GRAGLL
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A FI MPIEP WG+LL +C++HKN +L AAER+ +DP +SG ++ LAN+Y++
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
G+ +AA+ RK+MK+ GV+KE SW+ KN VH F D HPQ+ I+K EI E+
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEE 685
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
IK++G++PD+ VL +++ +E L+ HSEKLA+AF L++TP + + I KN+RVC DC
Sbjct: 686 IKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDC 745
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
HSA KF SK+V REIIVRD RFHHF+DG CSC DYW
Sbjct: 746 HSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 205/412 (49%), Gaps = 68/412 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++ YAK G + +R+L EMP D V+WTA+I GY+Q +NAI +F++M+ +
Sbjct: 80 NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P+QFT+S+VL + A T D GR++H+F +K G V V +SLL+MYA+
Sbjct: 140 PSQFTVSNVLSSCAANQTLD-IGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKV 198
Query: 142 -FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
FD+M + A F + ++ VSWN++I+G++++ +A
Sbjct: 199 VFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEA 258
Query: 180 LRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L FS+ML E +P +F+ +S+ +A A+ L GK +HA+++++ + VGN L+
Sbjct: 259 LVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALIS 318
Query: 239 MYAKSGSIE---------------------------------DAEKVFNRLLKRDVVSWN 265
MYAKSG +E A ++FN+L RDVV+W
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G Q+GL + F M+ G PN T +L+ S +L+ G+ A K
Sbjct: 379 AMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKA 438
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMH 376
G + + + + G ++ A K + ++P V W +++ A H
Sbjct: 439 GESSTPSVTNALIAMYAKTGNINVA-KRVFDLPNGKKEIVSWTSMIMALAQH 489
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 48/372 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD----------------- 44
C +L+KL + +HA+IL + + A+ N +++ YAK G ++
Sbjct: 285 CANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNII 344
Query: 45 ----------------EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
AR++F+++ +D+V WTA+I GY QN +A+ LF M+ G
Sbjct: 345 AFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL+++L S + T + G+Q+HA +K G V ++L+ MYA+ ++ A
Sbjct: 405 PEPNSYTLAAMLSVS-SSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVA 463
Query: 149 WFLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F K E VSW ++I A+ G++A+ F ML G +P H +Y V +A
Sbjct: 464 KRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTH 523
Query: 208 TGSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDV 261
G +EQG+ H I+ A ++D+Y ++G +++A + ++ D
Sbjct: 524 VGLVEQGRKYYNMMTEVHEIEPTLSHYA----CMIDLYGRAGLLQEAYLFIESMPIEPDN 579
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFA 320
++W S+L C H E++L I P N +L + S G +
Sbjct: 580 IAWGSLLASCKIHKNADLAKVAAERLLL--IDPGNSGAYLALANVYSACGKWENAAQTRK 637
Query: 321 LMKKHGVEPEEA 332
LMK GV E+
Sbjct: 638 LMKDRGVRKEKG 649
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 64/305 (20%)
Query: 110 DKF-GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D F GR VH +K G VY+ ++L+ YA+ + A +F + K+ SWN LI+
Sbjct: 25 DPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLIS 84
Query: 169 GHARKSEGE-------------------------------KALRTFSEMLREGFEPTHFS 197
G+A++ E A+ F++M+ E P+ F+
Sbjct: 85 GYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFT 144
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK--------------- 242
S+V ++ A+ +L+ G+ +H+ V+K G V +L++MYAK
Sbjct: 145 VSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT 204
Query: 243 ----------------SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
SG E A F ++ RD+VSWNSM++G +Q G + F K
Sbjct: 205 VKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSK 264
Query: 287 MLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
ML + P+ T +L+AC++ L+ G+ A + + E A + + ++G
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324
Query: 346 LLDRA 350
++ A
Sbjct: 325 GVEIA 329
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/563 (42%), Positives = 347/563 (61%), Gaps = 4/563 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+K L+ R +H + S F++ + + N +L+ Y KCG AR +F M K +V+W +
Sbjct: 259 MKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTM 318
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G +QN + E A F +ML G P + T+ VL A A D + G VH K
Sbjct: 319 IDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLAC-ANLGDLERGWFVHKLLDKLK 377
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D NV V +SL+ MY++ ++D A +F LE N V+WNA+I G+A+ ++AL F
Sbjct: 378 LDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFC 436
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M +G + F+ V TALA Q KW+H +++ FV LVDMYAK G
Sbjct: 437 MMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCG 496
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+I+ A K+F+ + +R V++WN+M+ G HG+GK T+ F +M + + PN +TFL V++
Sbjct: 497 AIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVIS 556
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+G ++EG F M++ + +EP HY VDLLGRAG LD A FI+EMPI+P
Sbjct: 557 ACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGI 616
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+V GA+LGAC++HKNVELG AA+++F+LDP + G H+LLANIYAS + A+ R M
Sbjct: 617 SVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAM 676
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
++ G+ K P CSWVE +N +H F + HP+ I+ + ++IK GYVPD +
Sbjct: 677 EDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSIH 736
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ +++ L HSE+LA+AF L++T PG+T+HI+KN+RVCGDCH K+ S V RE
Sbjct: 737 DVEEDVKKQL-LSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGRE 795
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
IIVRD RFHHF++G CSCGDYW
Sbjct: 796 IIVRDLRRFHHFKNGSCSCGDYW 818
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 195/369 (52%), Gaps = 6/369 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT K+L + + I+ + F N+ Q +++ + K G EA ++F+ + +K V +
Sbjct: 57 CTSKKELYQ---ILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLY 113
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ GY++N +A+ F +M+ ++ + +L+ G D K GR++H +
Sbjct: 114 HIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGEN-LDLKKGREIHGLII 172
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ N++V ++++ +YA+ Q+D+A+ +F ++ K+ VSW L+AG+A+ ++AL+
Sbjct: 173 TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQ 232
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M G +P + S+ A+A +L G+ +H + +SG + + V N L+DMY
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYF 292
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS A VF + + VVSWN+M+ GCAQ+G + F KML G P +VT +
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL AC++ G L+ G L+ K ++ + + + + + +D A + E
Sbjct: 353 VLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL--EK 410
Query: 362 TAAVWGALL 370
T W A++
Sbjct: 411 TNVTWNAMI 419
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/573 (41%), Positives = 346/573 (60%), Gaps = 21/573 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGC-------------------LDEARKLFDEMP 54
+HA + S D N +LN Y K C + RK+FDEM
Sbjct: 72 LHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMI 131
Query: 55 VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR 114
+D+V+W L+ G ++ + A+ +M R G +P+ FTLS+VL A D K G
Sbjct: 132 ERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIF-AECADVKRGL 190
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+VH F + G+D +V+VGSSL+DMYA + D + +F L ++ + WN+L+AG A+
Sbjct: 191 EVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNG 250
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
E+AL F ML+ G P ++SS+ + SL GK +HA+VI G + F+ +
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISS 310
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+L+DMY K G I A +F+++ DVVSW +M+ G A HG + + FE+M P
Sbjct: 311 SLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKP 370
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKF 353
N +TFL VLTACSHAGL+D+G YF M H G+ P H+ D LGRAG LD A F
Sbjct: 371 NHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNF 430
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I +M I+PTA+VW LL ACR+HKN L A++I EL+P G H++L+N+Y+++GR
Sbjct: 431 ISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRW 490
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
N+AA R+ M++ G+KK+PACSW+E K+ +H+FVA+D +HP I SE++ +
Sbjct: 491 NEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMARE 550
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
G+VP++ V +++ + L HSEKLA+ F +ISTP G+ I + KN+RVC DCH+
Sbjct: 551 GHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVT 610
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KF SK+ +REI+VRD NRFHHF+DG CSCGD+W
Sbjct: 611 KFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 155/277 (55%), Gaps = 8/277 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C +K+ E VH + F +D+ + +++++ YA C D + K+FD +PV+D +
Sbjct: 182 ECADVKRGLE---VHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHIL 238
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W +L++G +QN E A+ +F +ML+ G++P T SS++ G A+ +FG+Q+HA+
Sbjct: 239 WNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLAS-LRFGKQLHAYV 297
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G++ NV++ SSL+DMY + ++ A +F + S + VSW A+I G+A +AL
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVD 238
F M +P H ++ +V TA + G +++G W + + + +V + + L D
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKG-WKYFKSMSNHYGIVPTLEHFAALAD 416
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G +++A +++ +K W+++L C H
Sbjct: 417 TLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVH 453
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-------------- 242
S + + A+ G G +HA I+SG F N L+++Y K
Sbjct: 52 SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIV 111
Query: 243 -----SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
S + E KVF+ +++RDVVSWN+++ GCA+ G + + KM R G P+
Sbjct: 112 DVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSF 171
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T VL + + G ++G + + + +D+ D ++K +
Sbjct: 172 TLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL 231
Query: 358 PIEPTAAVWGALLGACRMHKNVE 380
P+ +W +LL C + +VE
Sbjct: 232 PVR-DHILWNSLLAGCAQNGSVE 253
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/563 (41%), Positives = 349/563 (61%), Gaps = 3/563 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K L + +H + + +F N + + +L+ YAKC CL ARK+FD M V++ V+W+A+I
Sbjct: 224 KALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMI 283
Query: 66 SGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
GY +D + A+ LF QM L+ + P TL SVL+A A TD GR++H + +K G
Sbjct: 284 GGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC-AKLTDLSRGRKLHCYIIKLG 342
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ +G++LL MYA+ +DDA F + K+ VS++A+++G + AL F
Sbjct: 343 SVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFR 402
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G +P + V A + +L+ G H ++I G + N L+DMY+K G
Sbjct: 403 MMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCG 462
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
I A +VFNR+ + D+VSWN+M+ G HGLG + F +L G+ P+ +TF+C+L+
Sbjct: 463 KISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLS 522
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
+CSH+GL+ EG+ +F A+ + + P H + VD+LGRAGL+D A FIR MP EP
Sbjct: 523 SCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDV 582
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W ALL ACR+HKN+ELG +++I L P +G +LL+NIY++AGR +DAA R
Sbjct: 583 RIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQ 642
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
K+ G+KK P CSW+E VH FV D +H Q + I++K E+ ++K++GY + S V
Sbjct: 643 KDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVF 702
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+++E+E L HSEKLA+AF +++ G I + KN+RVCGDCH+A KF + + +RE
Sbjct: 703 QDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKRE 762
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I VRD NRFHHF++G C+CGD+W
Sbjct: 763 ITVRDANRFHHFKNGTCNCGDFW 785
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 205/398 (51%), Gaps = 9/398 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L EA+ +H H L + D ++ + + Y C + AR+LFDE+P ++ W
Sbjct: 18 CIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILW 77
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+I Y+ N + AI L+ ML LG++PN++T VLKA SG A +D G ++H+
Sbjct: 78 NQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED--GVEIHSHA 135
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+G + +V+V ++L+D YA+ + +A LF+++ ++ V+WNA+IAG + + A+
Sbjct: 136 KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAV 195
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ +M EG P + V + +L GK +H + ++ VG L+DMY
Sbjct: 196 QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMY 255
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTF 299
AK + A K+F+ + R+ VSW++M+ G K + F++M L++ + P VT
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTL 315
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL AC+ L G+ + K G + T + + + G++D A++F EM
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM-- 373
Query: 360 EPTAAV-WGALLGACRMHKN--VELGAYAAERIFELDP 394
P +V + A++ C + N V L + ++ +DP
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 148/277 (53%), Gaps = 7/277 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +H +I+ DI + NT+L+ YAKCG +D+A + FDEM KD V++
Sbjct: 322 CAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSF 381
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A++SG QN A+ +F M G+ P+ T+ VL A A + G H + +
Sbjct: 382 SAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAA-LQHGFCSHGYLI 440
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + + ++L+DMY++ ++ A +F ++ + VSWNA+I G+ G +AL
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 500
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGN--TLVD 238
F ++L G +P ++ + ++ + +G + +G+ W A + +V + + +VD
Sbjct: 501 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDA--MSRDFSIVPRMEHCICMVD 558
Query: 239 MYAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQH 274
+ ++G I++A + N + DV W+++L+ C H
Sbjct: 559 ILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 140/309 (45%), Gaps = 2/309 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++H LK + + V L +Y +Q+ A LF + + + + WN +I +A
Sbjct: 28 KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN 87
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ A+ + ML G P ++Y V A + ++E G +H+H G + FV
Sbjct: 88 GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
LVD YAK G + +A+++F+ + RDVV+WN+M+ GC+ +GL V+ +M GI
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
PN T + VL A L G+ + + +D+ + L A K
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
M + + W A++G ++ +++ D D P + L ++ + +L
Sbjct: 268 FDVMGVRNEVS-WSAMIGGYVASDCMKEALELFDQMILKDAMDPTP-VTLGSVLRACAKL 325
Query: 414 NDAARARKM 422
D +R RK+
Sbjct: 326 TDLSRGRKL 334
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y + A + SL + K +H H +K+ + V + L +Y + A ++F+ +
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
V+ WN ++ A +G + + ML G+ PN+ T+ VL ACS +++G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ K G+E + VD + G+L A + M A W A++ C ++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLY 188
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 355/566 (62%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ +H+ I+ ++F+ + + + +++ YAK G LD A + KD+V+W
Sbjct: 483 CIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 542
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+GY+Q + + A+ F QML G++ ++ L++ + A AG K G+Q+HA
Sbjct: 543 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQAC 601
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ ++ ++L+ +Y++ +++A+ F E+ + ++WNAL++G + E+ALR
Sbjct: 602 VSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 661
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+ M REG + +F++ S A + T +++QGK VHA + K+G V N ++ MYA
Sbjct: 662 VFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYA 721
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI DA+K F L ++ VSWN+M+ ++HG G + F++M+ + + PN VT +
Sbjct: 722 KCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 781
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+D+G YF M ++G+ P+ HYV VD+L RAGLL RA FI EMPIE
Sbjct: 782 VLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIE 841
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VW LL AC +HKN+E+G +AA + EL+P DS ++LL+N+YA + + R
Sbjct: 842 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTR 901
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MKE GVKKEP SW+E KN++H F D HP IH+ +++++++ +IGYV D
Sbjct: 902 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCF 961
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+LS Q++++ + +HSEKLA++F L+S P I++ KN+RVC DCH KF SKV
Sbjct: 962 SLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVS 1021
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD RFHHF G CSC DYW
Sbjct: 1022 NREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 216/447 (48%), Gaps = 41/447 (9%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E R +H+ IL F N+ + +L+ Y G LD A K+FDEMP + + TW +I
Sbjct: 84 LDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKE 143
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ LF +M+ + PN+ T S VL+A G+ Q+HA + G
Sbjct: 144 LASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGK 203
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V + L+D+Y+R +D A +F L K+ SW A+I+G ++ +A+R F +M
Sbjct: 204 STIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMY 263
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G PT +++SSV +A SLE G+ +H V+K G +V N LV +Y GS+
Sbjct: 264 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLI 323
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
AE +F+ + +RD V++N+++ G +Q G G+ + F++M +G+ P+ T ++ ACS
Sbjct: 324 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACS 383
Query: 308 HAGLLDEGQGYFALMKKHG----------------------------VEPEEAHYVTFVD 339
G L GQ A K G +E E + V +
Sbjct: 384 SDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNV 443
Query: 340 LLGRAGLLD---RALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAERI---- 389
+L GLLD + + R+M IE P + ++L C ++ELG +I
Sbjct: 444 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTS 503
Query: 390 FELDPHDSGPHILLANIYASAGRLNDA 416
F+L+ + +L ++YA G+L+ A
Sbjct: 504 FQLNAYVCS---VLIDMYAKLGKLDTA 527
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 189/393 (48%), Gaps = 14/393 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+ +H +L F +D + N +++ Y G L A +F M +D VT+
Sbjct: 281 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTY 340
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+G SQ E A+ LF +M GL+P+ TL+S++ A + T G+Q+HA+
Sbjct: 341 NTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS-GQQLHAYTT 399
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ N + +LL++YA+ ++ A F E +N V WN ++ + + + R
Sbjct: 400 KLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 459
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M E P ++Y S+ G LE G+ +H+ +IK+ QL A+V + L+DMYA
Sbjct: 460 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYA 519
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A + R +DVVSW +M+ G Q+ + F +ML GI ++V
Sbjct: 520 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 579
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
++AC+ L EGQ A G + V L + G ++ A + E
Sbjct: 580 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAY-----LAFEQ 634
Query: 362 TAA----VWGALLGACRMHKNVELGAYAAERIF 390
T A W AL+ + N E A R+F
Sbjct: 635 TEAGDNIAWNALVSGFQQSGNNE----EALRVF 663
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 156/387 (40%), Gaps = 60/387 (15%)
Query: 190 GFEPTHFSYSSVFTA-LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P H + + L + GSL++G+ +H+ ++K G A + L+D Y G ++
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A KVF+ + +R + +WN M+ A L F +M+ + PN+ TF VL AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 309 AGL-LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK-----FIRE------ 356
+ D + A + G+ +DL R G +DRA + ++++
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241
Query: 357 -----------------------MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
+ I PT + ++L AC+ +++E+G + +L
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301
Query: 394 -PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDA 452
D+ L ++Y G L A S + + A ++ N + +
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIF-----SNMSQRDAVTYNTLINGL-----SQCG 351
Query: 453 HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL----QVHSEKLALAFAL 508
+ ++AM E+ ++++ G PDS+ + S + L Q+H+ L FA
Sbjct: 352 YGEKAM------ELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFAS 405
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKF 535
G+ +++ C D +A +
Sbjct: 406 NDKIEGALLNLYAK---CSDIETALNY 429
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/571 (41%), Positives = 357/571 (62%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H L +A VH HIL + D + ++ Y+ G +D ARK+FD+ + + W
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHA 118
AL + E + L+ +M R+G++ ++FT + VLKA A G+++HA
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ GY +VY+ ++L+DMYARF +D A ++F + +N VSW+A+IA +A+ + +
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
ALRTF EM+RE + P + SV A AS +LEQGK +H ++++ G + V + L
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MY + G +E ++VF+R+ RDVVSWNS+++ HG GK ++ FE+ML NG +P
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VTF+ VL ACSH GL++EG+ F M + HG++P+ HY VDLLGRA LD A K ++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+M EP VWG+LLG+CR+H NVEL A+ R+F L+P ++G ++LLA+IYA A ++
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R +K+++ G++K P W+E + ++ FV+ D+ +P IH +++E +K+ GY
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+P + VL + +E+E + HSEKLALAF LI+T G I I KN+R+C DCH KF
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK +E+EI+VRD NRFH F++G CSCGDYW
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 10/245 (4%)
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
++S N LI ++ + ++A+R S+ P+ +Y + SL VH
Sbjct: 46 KISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
H++ +G F+ L+ MY+ GS++ A KVF++ KR + WN++ G G+
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL----LDEGQGYFALMKKHGVEPEEAHYV 335
+ + KM R G+ ++ T+ VL AC + L +G+ A + + G
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
T VD+ R G +D A MP+ + W A++ AC A R +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVS-WSAMI-ACYAKNGKAFEALRTFREMMRETK 279
Query: 396 DSGPH 400
DS P+
Sbjct: 280 DSSPN 284
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/537 (43%), Positives = 345/537 (64%), Gaps = 4/537 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++ Y GCLD+AR+LFDE+PVKD+V+W A+ISGY Q+ + E AI+ F +M + PN
Sbjct: 203 LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPN 262
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+ T+ VL A G + + G+ + ++ G+ N+ + ++L+DMY + + D A LF
Sbjct: 263 KSTMVVVLSACGHTRSGE-LGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+E K+ +SWN +I G++ S E+AL F MLR +P ++ + A A G+L+
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381
Query: 213 QGKWVHAHVIKS-GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
GKWVHA++ K+ A + +L+DMYAK G IE AE+VF + R++ SWN+ML+G
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF 441
Query: 272 AQHGLGKATVRWFEKMLRNGI-APNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
A HG + + F +M+ G+ P+ +TF+ VL+AC+ AGL+D G YF ++++ +G+ P
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+ HY +DLL RA + A ++ M +EP A+WG+LL AC+ H VE G Y AER+
Sbjct: 502 KLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERL 561
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
F+L+P ++G +LL+NIYA AGR +D AR R + + G+KK P C+ +E VH F+
Sbjct: 562 FQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVG 621
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D HP+ I+K E+ + +++ G+VP++S VL D++ +E L HSEKLA++F LI
Sbjct: 622 DKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLI 681
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
T PG+TI I KN+RVCG+CHSA K SK+ REII RD NRFHHF+DGFCSC D W
Sbjct: 682 KTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 209/418 (50%), Gaps = 44/418 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVK-- 56
KC ++ K+ +H+ I+ + N + +Q+ +++ A + G L A LF+E
Sbjct: 37 KCKNINTFKQ---IHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHK 93
Query: 57 -DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGR 114
++ W +LI GYS + P +++ LFS+ML G++PN T + K+ + A AT + G+
Sbjct: 94 HNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHE--GK 151
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQM----------------------------- 145
Q+HA LK +N +V +S++ MYA +M
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211
Query: 146 --DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
DDA LF + K+ VSWNA+I+G+ + E+A+ F EM P + V +
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A T S E GKW+ + V +G + N L+DMY K G + A ++F+ + ++DV+S
Sbjct: 272 ACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVIS 331
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+M+ G + L + + FE MLR+ + PN VTFL +L AC+ G LD G+ A +
Sbjct: 332 WNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYID 391
Query: 324 KHGVEPEEAH-YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
K+ A + + +D+ + G ++ A + R M A+ W A+L MH + E
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS-WNAMLSGFAMHGHAE 448
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 150/281 (53%), Gaps = 11/281 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + + + + + + + F +++ + N +++ Y KCG D AR+LFD + KD+++W
Sbjct: 273 CGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW 332
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
+I GYS E A+ LF MLR +KPN T +L A GA D G+ VHA+
Sbjct: 333 NTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD--LGKWVHAYI 390
Query: 121 LK-YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K N + +SL+DMYA+ ++ A +F ++ S+N SWNA+++G A E+A
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERA 450
Query: 180 LRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVGNT 235
L FSEM+ +G F P ++ V +A G ++ G +I+ G +L +
Sbjct: 451 LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHY--GC 508
Query: 236 LVDMYAKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQHG 275
++D+ A++ E+AE + N ++ D W S+L+ C HG
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/568 (40%), Positives = 361/568 (63%), Gaps = 3/568 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + L+E R VHA ++ + ++ + + ++ YA+CG L++A + D MP +++V+
Sbjct: 44 ECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVS 103
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
WTA+ISGYSQN++P A LF MLR G +PN+FTL+SVL + +G+ +QVHAF
Sbjct: 104 WTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAF 163
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K ++ +++VGSSLLDMYAR + + +A +F L +++ VS+ +++G+ R E+A
Sbjct: 164 AIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEA 223
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F ++ EG + ++S + AL+ S++ GK VH +++ + N+L+DM
Sbjct: 224 LNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDM 283
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G + + +VF+ + +R VVSWN+ML G +HG+ V+ F M + + P+ VT
Sbjct: 284 YSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTL 342
Query: 300 LCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L VL SH GL+DEG F ++K+ HY +DLLGR+G L++AL I++MP
Sbjct: 343 LAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMP 402
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+PT A+WG+LLGACR+H NV +G + A+++F+++P ++G +++L+NIYA+A D R
Sbjct: 403 FQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFR 462
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M + V KEP SW+ +H F +++ HP++ I+ K EI IK G+VPD
Sbjct: 463 LRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPD 522
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
S VL D +++E L HSEKLA+ F L+STP TI + KN+R+C DCH+ KF SK
Sbjct: 523 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSK 582
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REI +RD NRFH +G C+CGDYW
Sbjct: 583 VYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + T +L +G+ VHA ++ +G + ++ LV MYA+ G++EDA V + +
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+R+VVSW +M++G +Q+ F MLR G PN+ T VLT+C+
Sbjct: 98 ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCT 147
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 364/569 (63%), Gaps = 6/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +VH +++ ++D+ + N ++N Y+K G L +A+++FD M V+D+V+W
Sbjct: 258 CAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSW 317
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QND P A+ F +ML +G++P+ T+ S+ G +D + GR VH F +
Sbjct: 318 NSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQ-LSDRRIGRAVHGFVV 376
Query: 122 KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + + ++ +G++L++MYA+ +D A +F L S++ +SWN LI G+A+ +A+
Sbjct: 377 RCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAI 436
Query: 181 RTFSEMLREG--FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
++ M+ EG P ++ S+ A + G+L+QG +H +IK+ L FV L+D
Sbjct: 437 DAYN-MMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLID 495
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K G +EDA +F + + V WN++++ HG G+ ++ F+ M +G+ + +T
Sbjct: 496 MYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHIT 555
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ +L+ACSH+GL+DE Q F M+K + ++P HY VDL GRAG L++A + M
Sbjct: 556 FVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNM 615
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI+ A++WG LL ACR+H N ELG +A++R+ E+D + G ++LL+NIYA+ G+ A
Sbjct: 616 PIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAV 675
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
+ R + ++ G++K P S V + V +F A + +HPQ A I+++ R ++ K+K +GYVP
Sbjct: 676 KVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVP 735
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D S VL ++ E+E L HSE+LA+ F +ISTPP S I I KN+RVCGDCH+A K+ S
Sbjct: 736 DYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYIS 795
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ EREIIVRD+NRFHHF+DG CSCGDYW
Sbjct: 796 KITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 166/300 (55%), Gaps = 8/300 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT++ K+ +HA +L D+ + ++ YA G L + F + K++ +W
Sbjct: 61 CTNINVAKQ---LHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSW 117
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+++S Y + + +++ +++L L G++P+ +T VLKA + A G ++H +
Sbjct: 118 NSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD----GEKMHCWV 173
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK G++ +VYV +SL+ +Y+RF ++ A +F + ++ SWNA+I+G + +AL
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R M E + + SS+ A + + G VH +VIK G + FV N L++MY
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMY 293
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G ++DA++VF+ + RD+VSWNS++ Q+ + +F++ML G+ P+ +T +
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVV 353
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
S ++ K +HA ++ G + LV +YA G + + F + ++++ SWNS
Sbjct: 60 SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119
Query: 267 MLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
M++ + G + ++ ++L +G+ P+ TF VL AC L +G+ + K
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGEKMHCWVLKM 176
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G E + + + L R G ++ A K +MP+ + W A++ + NV
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGS-WNAMISGFCQNGNVAEALRV 235
Query: 386 AERI 389
+R+
Sbjct: 236 LDRM 239
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/565 (40%), Positives = 348/565 (61%), Gaps = 2/565 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T++ L+ + +H I F++D + N ++ Y K C+++ K+F+ M D+V+W
Sbjct: 163 TNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWN 222
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
AL+SG+ + +F QML G KPN FT SVL+ S + D +FG+QVHA +K
Sbjct: 223 ALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLR-SCSSLLDPEFGKQVHAHIIK 281
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
D + +VG++L+DMYA+ ++DA F L +++ SW +I+G+A+ + EKA++
Sbjct: 282 NSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKY 341
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M REG +P ++ +S + + +LE G+ +HA +K+G FVG+ LVD+Y K
Sbjct: 342 FRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGK 401
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +E AE +F L+ RD+VSWN++++G +QHG G+ + F ML GI P++ TF+ V
Sbjct: 402 CGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGV 461
Query: 303 LTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ACS GL++EG+ F M K +G+ P HY VD+LGRAG + FI EM + P
Sbjct: 462 LSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTP 521
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ +W +LGAC++H NV+ G AA+++FE++P +ILL+NI+AS GR +D R
Sbjct: 522 YSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRA 581
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M G+KKEP CSWVE VH+F++ D +HP+ I+ K ++ + + IGYVP +
Sbjct: 582 LMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEV 641
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL +E+ L HSE+LAL+FAL+ST I I KN+R+C DCH K S +
Sbjct: 642 VLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITN 701
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
+EI+VRD RFHHF+ G CSC D W
Sbjct: 702 QEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 207/379 (54%), Gaps = 2/379 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+E +++HA L S + D + ++++ Y+KCG + +A K+F ++ D+V W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+G Q + A LF M R G +PNQFTLSS++ ++ D ++G+ +H
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLV-STATNMGDLRYGQSIHGCIC 179
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KYG++ + V + L+ MY + ++D +F A+ + + VSWNAL++G + R
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML EGF+P F++ SV + +S E GK VHAH+IK+ FVG LVDMYA
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K+ +EDA F+RL+ RD+ SW +++G AQ + V++F +M R GI PN+ T
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ CSH L+ G+ A+ K G + VDL G+ G ++ A + + I
Sbjct: 360 CLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISR 418
Query: 362 TAAVWGALLGACRMHKNVE 380
W ++ H E
Sbjct: 419 DIVSWNTIISGYSQHGQGE 437
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 169/310 (54%), Gaps = 5/310 (1%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
++ A +LF MP K+ V+W AL++GY+Q + + LF +M K ++FTLS+VLK
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
A + G+ +HA L+ G + + ++G SL+DMY++ + DA +FT + + + V+
Sbjct: 61 C-ANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
W+A+I G ++ G++A F M R+G P F+ SS+ + + G L G+ +H +
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K G + V N L+ MY KS +ED KVF + D+VSWN++L+G R
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE--GQGYFALMKKHGVEPEEAHYVTFVDL 340
F +ML G PN TF+ VL +CS LLD G+ A + K+ + ++ VD+
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCS--SLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDM 297
Query: 341 LGRAGLLDRA 350
+A L+ A
Sbjct: 298 YAKARCLEDA 307
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 125/226 (55%), Gaps = 1/226 (0%)
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
M+ A LF + KN VSWNAL+ G+A+ +G+K L+ F +M + + F+ S+V
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+TGSL +GK +HA ++SG ++ F+G +LVDMY+K G++ DA KVF ++ DVV+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
++M+TG Q G G+ F M R G PNQ T +++ ++ G L GQ + K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+G E + + + ++ ++ K M P W ALL
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALL 225
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+H+ L+ R +HA + + DI + + +++ Y KCGC++ A +F + +D+V+W
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGYSQ+ Q E A+ F ML G+ P++ T VL A ++ ++ +
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG + ++ + ++D+ R + ++ + + + W ++ H GE
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGE 543
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
KA + EM + ++ S++F + +G+W I++
Sbjct: 544 KAAKKLFEM-EPMMDSSYILLSNIFAS--------KGRWDDVRNIRA 581
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/555 (42%), Positives = 348/555 (62%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ I F +I + +++ YAKC + A ++FD+MP +++V+W ++I G+ N+
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ +F +LR + PN+ ++SSVL A A FGRQVH +KYG YV
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSAC-ANMGGLNFGRQVHGVVVKYGLVPLTYVM 385
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+SL+DMY + D+ LF + ++ V+WN L+ G + + E+A F M REG
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P S+S+V + AS +L QG +H +IK G + +L+ MYAK GS+ DA +V
Sbjct: 446 PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 505
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F + +V+SW +M++ HG + FE ML GI P+ VTF+CVL+ACSH G +
Sbjct: 506 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 565
Query: 313 DEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+EG +F MKK H + P HY VDLLGRAG LD A +FI MP++PT +VWGALLG
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
ACR + N+++G AAER+FE++P++ G ++LLAN+ +GRL +A R++M +GV+KE
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
P CSW++ KN +F A+D +H I+K ++ + +K+ GYV ++ V ++ ++ E
Sbjct: 686 PGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEE 745
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E L HSEKLALAF L++ P S I IKKN+R CG CH+ K ASK+ +REIIVRD NR
Sbjct: 746 EQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINR 805
Query: 552 FHHFRDGFCSCGDYW 566
FH F DGFCSCGDYW
Sbjct: 806 FHRFADGFCSCGDYW 820
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 205/393 (52%), Gaps = 12/393 (3%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMVTWTA 63
+ LK A +H I+ + + + + N ++N YAKCGCL++A LF K +VTWT+
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTS 215
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LI+ S + A+ LF+QM G PNQFT SS+L AS A G+Q+H+ K+
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMM-VLHGQQLHSLIHKH 274
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+D N++VG++L+DMYA+ M A +F + +N VSWN++I G + ++A+ F
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 334
Query: 184 SEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
++LRE P S SSV +A A+ G L G+ VH V+K G + +V N+L+DMY K
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
++ K+F + RDVV+WN ++ G Q+ + +F M R GI P++ +F V
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L + + L +G + K G + + + + G L A + + +
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHN 513
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
W A++ A ++H A ++ EL H
Sbjct: 514 VISWTAMISAYQLHG-------CANQVIELFEH 539
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 170/340 (50%), Gaps = 22/340 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L R VH ++ + N++++ Y KC DE KLF + +D+VTW
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 416
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ G+ QND+ E A F M R G+ P++ + S+VL +S + A + G +H +
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQ-GTAIHDQII 475
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GY N+ + SL+ MYA+ + DA+ +F +E N +SW A+I+ + + +
Sbjct: 476 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 535
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGNTL 236
F ML EG EP+H ++ V +A + TG +E+G H + G + A +
Sbjct: 536 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYA----CM 591
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG---LGK-ATVRWFEKMLRNG 291
VD+ ++G +++A++ + + S W ++L C ++G +G+ A R FE
Sbjct: 592 VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFE------ 645
Query: 292 IAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ P N ++ + C+ +G L+E LM +GV E
Sbjct: 646 MEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWN 265
T SL+ +H +I + + F+ N L+++YAK G + A +F+ + +V+W
Sbjct: 155 TRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWT 214
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
S++T + + + F +M +G PNQ TF +L+A + ++ GQ +L+ KH
Sbjct: 215 SLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKH 274
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G + VD+ + + A++ +MP E W +++
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/577 (41%), Positives = 356/577 (61%), Gaps = 37/577 (6%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I+ N +++ Y + G + A F++MP +D+V+W ++ISGYSQ A+ +FS+ML
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKML 266
Query: 86 -RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--- 141
LKP+ FTL+S+L A A G+Q+HA+ L+ + + VG++L+ MYA+
Sbjct: 267 NEPSLKPDNFTLASILSAC-ANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGG 325
Query: 142 --------------------FDQMDDAWF----------LFTALESKNEVSWNALIAGHA 171
F + D + +F L ++ V+W A+I G+
Sbjct: 326 VEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ AL F M+ EG EP ++ +++ + +S LE GK +HA IK+G
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V N L+ MYAK+G+I A++VF+ K+++VSW SM+ AQHGLGK + FE+ML
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ P+ +T++ VL+AC+H GL+++G+ Y+ +M + H +EP +HY +DL GRAGLL
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A FI MPIEP WG+LL +C++HKN +L AAER+ +DP +SG ++ LAN+Y++
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
G+ +AA+ RK+MK+ GV+KE SW+ KN VH F D HPQ+ I+K EI E+
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEE 685
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
IK++G++PD+ VL +++ +E L+ HSEKLA+AF L++TP + + I KN+RVC DC
Sbjct: 686 IKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDC 745
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
HSA KF SK+V REIIVRD RFHHF+DG CSC DYW
Sbjct: 746 HSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 205/412 (49%), Gaps = 68/412 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++ YAK G + +R+L EMP D V+WTA+I GY+Q +NAI +F++M+ +
Sbjct: 80 NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P+QFT+S+VL + A T D GR++H+F +K G V V +SLL+MYA+
Sbjct: 140 PSQFTVSNVLSSCAANQTLD-IGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKV 198
Query: 142 -FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
FD+M + A F + ++ VSWN++I+G++++ +A
Sbjct: 199 VFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEA 258
Query: 180 LRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L FS+ML E +P +F+ +S+ +A A+ L GK +HA+++++ + VGN L+
Sbjct: 259 LAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALIS 318
Query: 239 MYAKSGSIE---------------------------------DAEKVFNRLLKRDVVSWN 265
MYAKSG +E A ++FN+L RDVV+W
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G Q+GL + F M+ G PN T +L+ S +L+ G+ A K
Sbjct: 379 AMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKA 438
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMH 376
G + + + + G ++ A K + ++P V W +++ A H
Sbjct: 439 GESSTPSVTNALIAMYAKTGNINVA-KRVFDLPNGKKEIVSWTSMIMALAQH 489
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 48/372 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD----------------- 44
C +L+KL + +HA+IL + + A+ N +++ YAK G ++
Sbjct: 285 CANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNII 344
Query: 45 ----------------EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
AR++F+++ +D+V WTA+I GY QN +A+ LF M+ G
Sbjct: 345 AFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL+++L S + T + G+Q+HA +K G V ++L+ MYA+ ++ A
Sbjct: 405 PEPNSYTLAAMLSVS-SSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVA 463
Query: 149 WFLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F K E VSW ++I A+ G++A+ F ML G +P H +Y V +A
Sbjct: 464 KRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTH 523
Query: 208 TGSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDV 261
G +EQG+ H I+ A ++D+Y ++G +++A + ++ D
Sbjct: 524 VGLVEQGRKYYNMMTEVHEIEPTLSHYA----CMIDLYGRAGLLQEAYLFIESMPIEPDN 579
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFA 320
++W S+L C H E++L I P N +L + S G +
Sbjct: 580 IAWGSLLASCKIHKNADLAKVAAERLLL--IDPGNSGAYLALANVYSACGKWENAAQTRK 637
Query: 321 LMKKHGVEPEEA 332
LMK GV E+
Sbjct: 638 LMKDRGVRKEKG 649
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 64/305 (20%)
Query: 110 DKF-GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D F GR VH +K G VY+ ++L+ YA+ + A +F + K+ SWN LI+
Sbjct: 25 DPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLIS 84
Query: 169 GHARKSEGE-------------------------------KALRTFSEMLREGFEPTHFS 197
G+A++ E A+ F++M+ E P+ F+
Sbjct: 85 GYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFT 144
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK--------------- 242
S+V ++ A+ +L+ G+ +H+ V+K G V +L++MYAK
Sbjct: 145 VSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMT 204
Query: 243 ----------------SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
SG E A F ++ RD+VSWNSM++G +Q G + F K
Sbjct: 205 VKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSK 264
Query: 287 MLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
ML + P+ T +L+AC++ L+ G+ A + + E A + + ++G
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324
Query: 346 LLDRA 350
++ A
Sbjct: 325 GVEIA 329
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/567 (41%), Positives = 344/567 (60%), Gaps = 4/567 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + L + +HAHI+ + + + ++N Y+K + ++F + P K TW+
Sbjct: 31 TFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWS 90
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++IS ++QND P ++ F MLR G+ P+ S K+ G + + +H F LK
Sbjct: 91 SVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGI-LSSLPVAKMLHCFALK 149
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
Y +++VGSS++DMYA+ + A +F + +N VSW+ LI G+ + E +++LR
Sbjct: 150 TAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRL 209
Query: 183 FSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F L E F+ SSV + L+ G+ +H K+ FV ++L+ +Y
Sbjct: 210 FKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLY 269
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTF 299
+K G +E+A VF + R++ WN+ML CAQH T F+KM G+ N +TF
Sbjct: 270 SKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITF 329
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
LCVL ACSHAGL+++G+ YF LMK +G+EP HY T VDLLGRAG L+ A+K I EMP+
Sbjct: 330 LCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPM 389
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EPT +VWGALL CR+H N +L +Y A+R+ EL SG H++L+N YA+AGR +AA+A
Sbjct: 390 EPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKA 449
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RKMM++ G+KKE SWVE N +H F A D +H + I+ K E+ E++ + GYV D+
Sbjct: 450 RKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADT 509
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL D +E+ ++ HSE+LA+AF I+ P G I + KN+RVCGDCH+A KF SK
Sbjct: 510 SFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKC 569
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFH F DG C+CGDYW
Sbjct: 570 TGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 173/333 (51%), Gaps = 6/333 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L A+++H L +A+ DI + +++++ YAKCG + A +FDEMP +++V+W
Sbjct: 131 CGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSW 190
Query: 62 TALISGYSQNDQPENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ LI GY Q + + ++ LF + L N FTLSSVL+ G G+T + GR +H
Sbjct: 191 SGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCG-GSTLLQMGRLIHGL 249
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K +D + +V SSL+ +Y++ +++A+ +F + +N WNA++ A+ + +K
Sbjct: 250 SFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKT 309
Query: 180 LRTFSEMLREGFEPTHF-SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
F +M G +F ++ V A + G +E+GK+ + G + +T+VD
Sbjct: 310 FELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVD 369
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+ ++G + DA K+ + S W ++LTGC HG K +++ G + +
Sbjct: 370 LLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGL 429
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ + A + AG +E +M+ G++ E
Sbjct: 430 HVM-LSNAYAAAGRWEEAAKARKMMRDRGIKKE 461
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 86/189 (45%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P + + + +L + SL +G +HAH+IK G Q + + + L++ Y+K+ + +
Sbjct: 17 QPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQ 76
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+ + +W+S+++ AQ+ L ++ +F MLR G+ P+ F +C
Sbjct: 77 IFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSS 136
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L + K + + +D+ + G + A EMP + G + G
Sbjct: 137 LPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYG 196
Query: 372 ACRMHKNVE 380
++ ++ E
Sbjct: 197 YVQLGEDDE 205
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 349/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA-RKLFDEMPVKDMVT 60
C L L +I+H +D+ + N ++ Y KCG ++EA +++FD M K + +
Sbjct: 218 CAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSS 277
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W AL+ GY+QN P A+ L+ QM GL P+ FT+ S+L A + +G ++H F
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC-SRMKSLHYGEEIHGFA 336
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L+ G + ++G SLL +Y + A LF +E ++ VSWN +IAG+++ ++A+
Sbjct: 337 LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAI 396
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML +G +P + V A + +L GK +H +K+ FV ++++DMY
Sbjct: 397 NLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMY 456
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G I ++++F+RL ++DV SWN ++ G HG GK + FEKMLR G+ P+ TF
Sbjct: 457 AKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFT 516
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSHAGL+++G YF ++ H +EP+ HY VD+LGRAG +D AL+ I EMP
Sbjct: 517 GILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPG 576
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P + +W +LL +CR+H N+ LG A ++ EL+P ++L++N++A +G+ +D R
Sbjct: 577 DPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRV 636
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R MK+ G++K+ CSW+E VH F+ D+ P+ + + WR + KI IGY PD+
Sbjct: 637 RGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDT 696
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL +++++ L+ HSEKLA++F L++T G + + KN+R+CGDCH+A KF SKV
Sbjct: 697 GSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKV 756
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V R+I+VRD RFHHFRDG CSCGDYW
Sbjct: 757 VNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 198/378 (52%), Gaps = 5/378 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C K ++ R +H + S F ND + I+ Y+ CG ++R +FD++ K++
Sbjct: 115 CGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQ 174
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W A++S Y++N+ E+A+ +FS+++ + KP+ FTL V+KA AG D G+ +H
Sbjct: 175 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC-AGLLDLGLGQIIHGM 233
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEK 178
K +V+VG++L+ MY + +++A +F +++K SWNAL+ G+A+ S+ K
Sbjct: 234 ATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRK 293
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL + +M G +P F+ S+ A + SL G+ +H +++G + F+G +L+
Sbjct: 294 ALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLS 353
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y G A+ +F+ + R +VSWN M+ G +Q+GL + F +ML +GI P ++
Sbjct: 354 LYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 413
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+CV ACS L G+ K + + + +D+ + G + + + +
Sbjct: 414 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 473
Query: 359 IEPTAAVWGALLGACRMH 376
E A W ++ +H
Sbjct: 474 -EKDVASWNVIIAGYGIH 490
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/565 (40%), Positives = 350/565 (61%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R VH I F++D+ +QN ++ YAKCG + A +F + + +V+W
Sbjct: 183 CSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSW 242
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGY+QN QP A+ +FS+M + ++P+ L SVL+A D + G+ +H +
Sbjct: 243 TSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAY-TDVEDLEHGKSIHGCVI 301
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SL +YA+ + A F +E+ + + WNA+I+G+ + E+A+
Sbjct: 302 KMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIE 361
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M + P + +S A A GSLE +W+ ++ S + V +L+D YA
Sbjct: 362 LFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYA 421
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS++ A VF+R+ +DVV W++M+ G HG G+ ++ F M + G++PN VTF+
Sbjct: 422 KCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVG 481
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTAC ++GL++EG F M+ +G+EP HY VDLLGRAG LDRA F+ MPIEP
Sbjct: 482 LLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEP 541
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+VWGALL AC++H++V LG YAAER+F LDP+++G ++ L+N+YAS+ + A+ R
Sbjct: 542 GVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRV 601
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M+E G+ K S +E + F A D HP+ I ++ ++ ++K+ G+VP +
Sbjct: 602 LMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTES 661
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + +E E L HSE+LA+A+ LISTPPG+T+ I KN+R C +CH+A K SK+V
Sbjct: 662 VLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVS 721
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD RFHHF+DG CSCGDYW
Sbjct: 722 REIVVRDACRFHHFKDGACSCGDYW 746
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 185/374 (49%), Gaps = 8/374 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
THL + ++A +L + + + ++N + G + ARKLFD+ P D+ W
Sbjct: 89 THLNQ------IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWN 142
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A++ YS++ +AI ++++M + P+ F+ VLKA A + GR+VH +
Sbjct: 143 AIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALE-MGRRVHGQIFR 201
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+G++ +V+V + L+ +YA+ ++ A +F L + VSW ++I+G+A+ + +ALR
Sbjct: 202 HGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRI 261
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
FSEM + P + SV A LE GK +H VIK G + + +L +YAK
Sbjct: 262 FSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAK 321
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G + A FN++ ++ WN+M++G ++G + + F M I P+ +T
Sbjct: 322 CGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSS 381
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ AC+ G L+ + + + + +D + G +D A +F+ + +
Sbjct: 382 IAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMA-RFVFDRIPDKD 440
Query: 363 AAVWGALLGACRMH 376
VW A++ +H
Sbjct: 441 VVVWSAMMVGYGLH 454
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/554 (42%), Positives = 344/554 (62%), Gaps = 3/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH H + +D+ + + ++ Y +CG +D+A+ +FD++ V+++ TW A+I G +Q
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKC 416
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF QM R G P+ T ++L A+ G ++ ++VH++ + G ++ VG+
Sbjct: 417 GREALSLFLQMRREGFFPDATTFVNILSAN-VGEEALEWVKEVHSYAIDAGLV-DLRVGN 474
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ MYA+ A +F + +N +W +I+G A+ G +A F +MLREG P
Sbjct: 475 ALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP 534
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+Y S+ +A ASTG+LE K VH+H + +G VGN LV MYAK GS++DA +VF
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVF 594
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +L+RDV SW M+ G AQHG G + F KM G PN +F+ VL+ACSHAGL+D
Sbjct: 595 DDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVD 654
Query: 314 EGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ F +L + +G+EP HY VDLLGRAG L+ A FI MPIEP A WGALLGA
Sbjct: 655 EGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGA 714
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C + N+E+ +AA+ +L P + ++LL+NIYA+ G R MM+ G++KEP
Sbjct: 715 CVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEP 774
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SW+E N +H FV D +HP+ I+ K +++ +++K GYVPD+ VL DQ+ +E
Sbjct: 775 GRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKE 834
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+ + L+ TP + I + KN+RVC DCH+A KF SKV REI+ RD RF
Sbjct: 835 QALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRF 894
Query: 553 HHFRDGFCSCGDYW 566
HHF+DG CSCGDYW
Sbjct: 895 HHFKDGVCSCGDYW 908
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 205/382 (53%), Gaps = 12/382 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK + +HAHI+ S F++D+ ++ ++N Y KCG +D+A+ +FD+M +++++W
Sbjct: 40 CCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISW 99
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G + + + A F QM R G PN +T S+L A+ A A ++ ++VH+ +
Sbjct: 100 TVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNAN-ASAGALEWVKEVHSHAV 158
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G ++ VG++L+ MYA+ +DDA +F + ++ SW +I G A+ G++A
Sbjct: 159 NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFS 218
Query: 182 TFSEMLREGFEPTHFSYSSVF--TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M R G P +Y S+ +A+ STG+LE K VH H K+G VGN L+ M
Sbjct: 219 LFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHM 278
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GSI+DA VF+ + RDV+SWN+M+ G AQ+G G F KM + G P+ T+
Sbjct: 279 YAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTY 338
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV----TFVDLLGRAGLLDRALKFIR 355
L +L G + + + KH VE + FV + R G +D A
Sbjct: 339 LSLLNTHVSTGAWE----WVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFD 394
Query: 356 EMPIEPTAAVWGALLGACRMHK 377
++ + W A++G K
Sbjct: 395 KLAVR-NVTTWNAMIGGVAQQK 415
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 225/463 (48%), Gaps = 49/463 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + VH+H + + D+ + N +++ YAK G +D+AR +FD M +D+ +WT +I G
Sbjct: 147 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGG 206
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFCLKYGYD 126
+Q+ + + A LF QM R G PN T S+L AS +T ++ ++VH K G+
Sbjct: 207 LAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFI 266
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++ VG++L+ MYA+ +DDA +F + ++ +SWNA+I G A+ G +A F +M
Sbjct: 267 SDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKM 326
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+EGF P +Y S+ STG+ E K VH H ++ G VG+ V MY + GSI
Sbjct: 327 QQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSI 386
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA- 305
+DA+ +F++L R+V +WN+M+ G AQ G+ + F +M R G P+ TF+ +L+A
Sbjct: 387 DDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSAN 446
Query: 306 ---------------CSHAGLLD--EGQGYFALMKKHG------------VEPEEAHYVT 336
AGL+D G + K G VE +
Sbjct: 447 VGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTV 506
Query: 337 FVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
+ L + G A +M I P A + ++L AC A E + E+
Sbjct: 507 MISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACA-------STGALEWVKEVH 559
Query: 394 PHDSGPHIL--------LANIYASAGRLNDAARARKMMKESGV 428
H ++ L ++YA G ++DA R M E V
Sbjct: 560 SHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDV 602
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 1/242 (0%)
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I GY++ E+A+ ++SQM R G +PN+ T S+LKA K+G+++HA ++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKAC-CSPVSLKWGKKIHAHIIQS 59
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ +V V ++L++MY + +DDA +F + +N +SW +I G A G++A F
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M REGF P ++Y S+ A AS G+LE K VH+H + +G L VGN LV MYAKS
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GSI+DA VF+ +++RD+ SW M+ G AQHG G+ F +M R G PN T+L +L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 304 TA 305
A
Sbjct: 240 NA 241
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 181/407 (44%), Gaps = 34/407 (8%)
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+I G+A E A++ +S+M REG +P +Y S+ A S SL+ GK +HAH+I+SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
Q V LV+MY K GSI+DA+ +F+++++R+V+SW M+ G A +G G+ F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M R G PN T++ +L A + AG L+ + + G+ + V + ++G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH----- 400
+D A + + + +E W ++G H G A +++ P+
Sbjct: 181 SIDDA-RVVFDGMVERDIFSWTVMIGGLAQHGR---GQEAFSLFLQMERGGCLPNLTTYL 236
Query: 401 -ILLANIYASAGRLNDAARARKMMKESG-----------VKKEPACSWVETKNAVHMFVA 448
IL A+ S G L K ++G + C ++ V +
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 449 NDDAHPQRAMI---------HKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
+ D AMI H+ + I K++Q G+VPDS+ LS + +
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAF-TIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355
Query: 500 E--KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
E K A+ L+S + + IR CG A K+ R +
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIR-CGSIDDAQLIFDKLAVRNV 401
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 4/226 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH+H + + +D+ + N +++ YAKCG +D+AR++FD+M +D+ +W
Sbjct: 546 CASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSW 605
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G +Q+ + +A+ LF +M G KPN ++ +VL A D+ RQ +
Sbjct: 606 TVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQ 665
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
YG + + + ++D+ R Q+++A F+ + W AL+ A + G +
Sbjct: 666 DYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLG--ACVTYGNLEM 723
Query: 181 RTFSEMLREGFEPTHFS-YSSVFTALASTGSLEQGKWVHAHVIKSG 225
F+ R +P S Y + A+TG+ EQ V + + + G
Sbjct: 724 AEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRG 769
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/560 (41%), Positives = 356/560 (63%), Gaps = 3/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L ++ VH H + +D + +++AY++ C+ EA LF+ D+V W A+++G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAG 491
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q+ + LF+ M + G + + FTL++V K G ++ G+QVHA+ +K GYD
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ-GKQVHAYAIKSGYDL 550
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++V S +LDMY + M A F F ++ ++V+W +I+G E E+A FS+M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P F+ +++ A + +LEQG+ +HA+ +K FVG +LVDMYAK GSI+
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DA +F R+ ++ +WN+ML G AQHG GK T++ F++M GI P++VTF+ VL+ACS
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 308 HAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+ E + M +G++PE HY D LGRAGL+ +A I M +E +A+++
Sbjct: 731 HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMY 790
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
LL ACR+ + E G A ++ EL+P DS ++LL+N+YA+A + ++ AR MMK
Sbjct: 791 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGH 850
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
VKK+P SW+E KN +H+FV +D ++ Q +I++K +++ IKQ GYVP++ L
Sbjct: 851 KVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDV 910
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+++E+E L HSEKLA+AF L+STPP + I + KN+RVCGDCH+A K+ +KV REI++
Sbjct: 911 EEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVL 970
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH F+DG CSCGDYW
Sbjct: 971 RDANRFHRFKDGICSCGDYW 990
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 191/363 (52%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH L + + N+++N Y K AR +FD M +D+++W ++I+G +QN
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF Q+LR GLKP+Q+T++SVLKA+ + +QVH +K + +V +
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D Y+R M +A LF + + V+WNA++AG+ + +G K L+ F+ M ++G
Sbjct: 457 ALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS 515
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F+ ++VF ++ QGK VHA+ IKSG L +V + ++DMY K G + A+ F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + D V+W +M++GC ++G + F +M G+ P++ T + A S L+
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+G+ A K + + VD+ + G +D A + + + A W A+L
Sbjct: 636 QGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGL 694
Query: 374 RMH 376
H
Sbjct: 695 AQH 697
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 176/333 (52%), Gaps = 8/333 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + + VHA+ + S + D+ + + IL+ Y KCG + A+ FD +PV D V W
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +ISG +N + E A +FSQM +G+ P++FT++++ KAS ++ GRQ+HA L
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ-GRQIHANAL 645
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +VG+SL+DMYA+ +DDA+ LF +E N +WNA++ G A+ EG++ L+
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F +M G +P ++ V +A + +G + + + H + + + + L D
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA-YKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQV 297
++G ++ AE + + ++ + ++L C G + R K+L + P +
Sbjct: 765 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE--LEPLDSS 822
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
++ + + A DE + +MK H V+ +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 153/324 (47%), Gaps = 4/324 (1%)
Query: 51 DEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD 110
D V +++ +S Y + Q + F+ M+ ++ +Q T +L A+
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML-ATAVKVDSL 331
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 170
G+QVH LK G D + V +SL++MY + + A +F + ++ +SWN++IAG
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLV 229
A+ +A+ F ++LR G +P ++ +SV A +S L K VH H IK
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
+FV L+D Y+++ +++AE +F R D+V+WN+M+ G Q G T++ F M +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G + T V C +++G+ A K G + + +D+ + G +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 350 ALKFIREMPIEPTAAVWGALLGAC 373
A +P+ P W ++ C
Sbjct: 571 AQFAFDSIPV-PDDVAWTTMISGC 593
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 135/306 (44%), Gaps = 33/306 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + + H + D + ++N Y K G + E + LF+EMP +D+V W
Sbjct: 155 CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ Y + E AI L S GL PN+ TL + + SG DD QV +F
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG----DDSDAGQVKSFA- 269
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
N SS+ ++ R N ++ + + L+
Sbjct: 270 ------NGNDASSVSEIIFR----------------------NKGLSEYLHSGQYSALLK 301
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M+ E ++ + SL G+ VH +K G L+ V N+L++MY
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K A VF+ + +RD++SWNS++ G AQ+GL V F ++LR G+ P+Q T
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 302 VLTACS 307
VL A S
Sbjct: 422 VLKAAS 427
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 143/329 (43%), Gaps = 44/329 (13%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + HA IL + + N +++ Y+KCG L AR++FD+MP +D+V+W ++++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 68 YSQN-----DQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAF 119
Y+Q+ + + A +LF + + + ++ TLS +LK SG + F H +
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF----HGY 170
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G D + +V +L+++Y +F ++ + LF + ++ V WN ++ + E+A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ S G P + + ++ S GQ+ +F
Sbjct: 231 IDLSSAFHSSGLNPNEITL-RLLARISGDDS-------------DAGQVKSFANGN---- 272
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
DA V +++ N L+ G A ++ F M+ + + +QVTF
Sbjct: 273 --------DASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTF 318
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+ +L L GQ + K G++
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLD 347
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
++D G+ HA L + + ++ ++L+ MY++ + A +F + ++ VSWN++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 167 IAGHARKSEG-----EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
+A +A+ SE ++A F + ++ + + S + +G + + H +
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
K G FV LV++Y K G +++ + +F + RDVV WN ML + G + +
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 282 RWFEKMLRNGIAPNQVTF 299
+G+ PN++T
Sbjct: 232 DLSSAFHSSGLNPNEITL 249
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
++ L GK HA ++ F+ N L+ MY+K GS+ A +VF+++ RD+VSWNS
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 267 MLTG------CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+L C + +A + F + ++ + +++T +L C H+G + + +
Sbjct: 111 ILAAYAQSSECVVENIQQAFL-LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG 169
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
K G++ +E V++ + G + EMP +W +L A
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKA 220
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/554 (42%), Positives = 347/554 (62%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + + + + + +L+ YAKCG +++A +F+ +P D++ W+ LIS Y+Q+ Q
Sbjct: 271 IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQ 330
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A +F +M+R + PN+F+LS VL+A A + G Q+H +K GY+ ++VG+
Sbjct: 331 NEQAFEMFLRMMRSFVVPNEFSLSGVLQAC-ANIAFLELGEQIHNLAIKLGYESELFVGN 389
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMYA+ M+++ +F++L+ NEVSWN +I G+ + E AL F EM
Sbjct: 390 ALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLS 449
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T ++SSV A A+T S++ +H+ + KS V N+L+D YAK G I DA KVF
Sbjct: 450 TQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVF 509
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ DVVSWNS+++ A HG + F++M ++ I N VTF+ +L+ C GL++
Sbjct: 510 ESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVN 569
Query: 314 EGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G F ++M H ++P HY V LLGRAG L ALKFI ++P P+ VW ALL +
Sbjct: 570 QGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSS 629
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C +HKNV LG YAAE++ +++PHD ++LL+N+YA+AG L++ A RK M+ GVKKE
Sbjct: 630 CVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEA 689
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWVE K VH F HP +I+ ++ K + GYVPD + VL D++E+
Sbjct: 690 GLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKA 749
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L VHSE+LALA+ L TPPG I I KN+R C DCH+ FK SK+V+REIIVRD NRF
Sbjct: 750 RMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRF 809
Query: 553 HHFRDGFCSCGDYW 566
HHF +G CSCGDYW
Sbjct: 810 HHFEEGICSCGDYW 823
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 188/344 (54%), Gaps = 2/344 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++AY+ CG + AR +FD + KD VTWTA++S YS+ND PE A+ FS+M G KPN
Sbjct: 189 LIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPN 248
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
F L+S LKA+ + G+ +H +K YD +VG +LLDMYA+ ++DA +F
Sbjct: 249 PFVLTSALKAA-VCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIF 307
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ + + W+ LI+ +A+ + E+A F M+R P FS S V A A+ LE
Sbjct: 308 EMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLE 367
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
G+ +H IK G + FVGN L+DMYAK ++E++ ++F+ L + VSWN+++ G
Sbjct: 368 LGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYC 427
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
Q G + + F +M + QVTF VL AC++ + +L++K +
Sbjct: 428 QSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTI 487
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ +D + G + ALK + E +E W +++ A +H
Sbjct: 488 VCNSLIDTYAKCGFIRDALK-VFESIVECDVVSWNSIISAYALH 530
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 190/379 (50%), Gaps = 9/379 (2%)
Query: 1 KCTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
+C + R VHA ++ G + D N +LN YAK G L AR+LFD MP ++
Sbjct: 54 RCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNR 113
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ--V 116
V++ L+ GY+ + E A+ LF ++ R G + N F L+++LK T D G +
Sbjct: 114 VSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVL---VTMDAPGLACGI 170
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA K G+D N +VG++L+D Y+ + A +F + K+ V+W A+++ ++
Sbjct: 171 HACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIP 230
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E AL TFS+M GF+P F +S A S GK +H +K+ VG L
Sbjct: 231 EYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGAL 290
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+DMYAK G IEDA +F + DV+ W+ +++ AQ + F +M+R+ + PN+
Sbjct: 291 LDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNE 350
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+ VL AC++ L+ G+ L K G E E +D+ + ++ +L+
Sbjct: 351 FSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSS 410
Query: 357 MPIEPTAAVWGALL-GACR 374
+ + W ++ G C+
Sbjct: 411 LQ-DANEVSWNTIIVGYCQ 428
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 165/339 (48%), Gaps = 20/339 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+ +H + +++++ + N +++ YAKC ++ + ++F + + V+W
Sbjct: 360 CANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSW 419
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY Q+ E+A+ +F +M + Q T SSVL+A A + K Q+H+
Sbjct: 420 NTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRAC-ANTSSIKHAVQIHSLIE 478
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ + V +SL+D YA+ + DA +F ++ + VSWN++I+ +A AL
Sbjct: 479 KSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALE 538
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA-----HVIKSGGQLVAFVGNTL 236
F M + + ++ S+ + STG + QG W+ H IK + +
Sbjct: 539 LFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHY----TCI 594
Query: 237 VDMYAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGI 292
V + ++G + DA K + + W ++L+ C H LG+ EK+L I
Sbjct: 595 VRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAA---EKVL--DI 649
Query: 293 AP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
P ++ T++ + + AG+LDE + M+ GV+ E
Sbjct: 650 EPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKE 688
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/599 (40%), Positives = 358/599 (59%), Gaps = 38/599 (6%)
Query: 2 CTHLKKLKEARIVHAHI--LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+ + +LK+ H+ I LG + ND + A +K G L+ A ++FD++P D
Sbjct: 30 CSTMAELKQ---YHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAY 86
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ + GY + N I ++S+ML + PN+FT +++A ++ G+Q+HA
Sbjct: 87 IYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEE-GKQIHAH 145
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQM-------------------------------DDA 148
LK+G+ + + ++L+ MY F + D A
Sbjct: 146 VLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKA 205
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F + +N VSWNA+IA + + + +A F M E F +S+ +A
Sbjct: 206 REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 265
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
G+LEQGKW+H ++ KSG +L + + T++DMY K G +E A +VFN L ++ + SWN M+
Sbjct: 266 GALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 325
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGV 327
G A HG G+A + F++M R +AP+ +TF+ VL+AC+H+GL++EG+ YF M + G+
Sbjct: 326 GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 385
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
+P H+ VDLLGRAGLL+ A K I EMP+ P A V GAL+GACR+H N ELG +
Sbjct: 386 KPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGK 445
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
++ EL+PH+SG ++LLAN+YASAGR D A+ RK+M + GVKK P S +E+++ V F+
Sbjct: 446 KVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFI 505
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
A AHPQ I+ K EI E I+ IGYVPD+ VL D++E+E L HSEKLA+AF
Sbjct: 506 AGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFG 565
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
L+ T PG T+ I KN+R+C DCH A K SKV +REII+RD NRFHHFR G CSC DYW
Sbjct: 566 LLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/566 (41%), Positives = 356/566 (62%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L++ + +HA I+ S +D+ + + Y KCG + +AR++F+ +P +D++ W
Sbjct: 256 CGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAW 315
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G + Q E A +F +ML+ + P++ T ++L A A G+++HA +
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSAC-ARPGGLACGKEIHARAV 374
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V G++L++MY++ M DA +F + ++ VSW AL+ G+A + ++
Sbjct: 375 KDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFS 434
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
TF +ML++G E +Y V A ++ +L+ GK +HA V+K+G V N L+ MY
Sbjct: 435 TFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYF 494
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +V + RDVV+WN+++ G AQ+G G ++ FE M + PN TF+
Sbjct: 495 KCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVN 554
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
V++AC L++EG+ FA M+K +G+ P E HY VD+L RAG L A I MP +
Sbjct: 555 VMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFK 614
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P+AA+WGALL ACR H NVE+G AAE+ +L+P ++G ++ L+ IYA+AG D A+ R
Sbjct: 615 PSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLR 674
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MKE GVKKEP SW+E VH FVA D +HP+ I+ + ++++IK +GYVPD+
Sbjct: 675 KLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTR 734
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V+ DQ+ +E + HSEKLA+A+ LISTPP + I + KN+RVC DCH+A KF SK+
Sbjct: 735 FVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKIT 794
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII RD +RFHHF++G CSCGDYW
Sbjct: 795 GREIIARDAHRFHHFKNGECSCGDYW 820
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 208/370 (56%), Gaps = 2/370 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + VH HIL K ++ + NT+L Y CG ++EAR+LFD+ K +V+W
Sbjct: 54 CVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSW 113
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY+ + A LF+ M + GL+P++FT S+L A + A + +GR+VH +
Sbjct: 114 NVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALN-WGREVHVRVM 172
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N VG++L+ MYA+ + DA +F A+ S++EVSW L +A +++L+
Sbjct: 173 EAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLK 232
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
T+ ML+EG P+ +Y +V +A S +LE+GK +HA +++S V L MY
Sbjct: 233 TYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYI 292
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+++DA +VF L RDV++WN+M+ G G + F +ML+ +AP++VT+L
Sbjct: 293 KCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLA 352
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L+AC+ G L G+ A K G+ + +++ +AG + A + MP
Sbjct: 353 ILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRD 412
Query: 362 TAAVWGALLG 371
+ W AL+G
Sbjct: 413 VVS-WTALVG 421
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 35/264 (13%)
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
++G + + Y + + L GK VH H+++ G + ++ NTL+ +Y GS+
Sbjct: 37 QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A ++F++ + VVSWN M++G A GLG+ F M + G+ P++ TF+ +L+ACS
Sbjct: 97 EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156
Query: 308 ----------------HAGLLDE---GQGYFALMKKHG------------VEPEEAHYVT 336
AGL + G ++ K G +E + T
Sbjct: 157 SPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 216
Query: 337 FVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
+G +LK M + P+ + +L AC +E G +I E +
Sbjct: 217 LTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESE 276
Query: 394 PH-DSGPHILLANIYASAGRLNDA 416
H D L +Y G + DA
Sbjct: 277 HHSDVRVSTALTKMYIKCGAVKDA 300
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/572 (41%), Positives = 360/572 (62%), Gaps = 37/572 (6%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR-LGL 89
NT+++++ + G +D A+ F++M +D+V+W A+ISGY+Q+ A+ +FS+ML
Sbjct: 215 NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSS 274
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------- 141
KP++FTL+S L A A + K G+Q+HA ++ +D VG++L+ MY++
Sbjct: 275 KPDKFTLASALSAC-ANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQ 333
Query: 142 ---------------FDQMDDAWF----------LFTALESKNEVSWNALIAGHARKSEG 176
F + D + +F +L ++ V+W A+I G+ +
Sbjct: 334 KIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFN 393
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+ A+ F M++EG +P +++ +++ + +S SL+ G+ +HA +SG V N L
Sbjct: 394 QDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNAL 453
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+ MYAKSGSI DA VFN + KRD ++W SM+ AQHGLG+ + FE+ML NGI P+
Sbjct: 454 ITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPD 513
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+T++ VL+AC+H GL+++G+ Y+ LM+ H + P +HY +DL GRAGLL A FI
Sbjct: 514 HITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFI 573
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
MPIEP WG+LL +C++HKNVEL AAER+ ++P +SG + LAN+Y++ G+
Sbjct: 574 ENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWE 633
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
+AA RK MK+ GVKK+ SWV+ KN VH+F +D HPQR I++ +I ++IK++G
Sbjct: 634 NAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMG 693
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
+VPD+ VL +++ +E L HSEKLA+AF LI TP +T+ I KN+RVC DCHSA K
Sbjct: 694 FVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIK 753
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SK+V REIIVRD RFHHF++G CSC DYW
Sbjct: 754 FISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 205/426 (48%), Gaps = 66/426 (15%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N IL+ YAK G L+EA ++F+EMP D V+WTA+I GY+Q Q ENAI +F +M+ +
Sbjct: 83 NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P QFTL++VL AS A GR+VH+F +K+G + V +SLL+MYA+
Sbjct: 143 PTQFTLTNVL-ASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKI 201
Query: 142 -FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
FD+M D A F + ++ VSWNA+I+G+ + +A
Sbjct: 202 VFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREA 261
Query: 180 LRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L FS+ML + +P F+ +S +A A+ +L+ GK +HAH+I++ VGN L+
Sbjct: 262 LDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALIS 321
Query: 239 MYAKSGSIEDAEK---------------------------------VFNRLLKRDVVSWN 265
MY+KSG +E A+K +F+ L RDVV+W
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWT 381
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G Q+G + + F M++ G PN T +L+ S LD G+ A +
Sbjct: 382 AMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G + + + ++G ++ A + + W +++ A H E
Sbjct: 442 GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTL 501
Query: 386 AERIFE 391
ER+ E
Sbjct: 502 FERMLE 507
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 167/310 (53%), Gaps = 39/310 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKN---------------------------------DIA 28
C +L+ LK + +HAHI+ + F D+
Sbjct: 288 CANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVI 347
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+L+ Y K G ++ AR++FD + V+D+V WTA+I GY QN ++A+ LF M++ G
Sbjct: 348 AFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEG 407
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
KPN +TL+++L S + A+ D GRQ+HA + G +V V ++L+ MYA+ ++DA
Sbjct: 408 PKPNNYTLATMLSVSSSLASLDH-GRQIHASATRSGNASSVSVSNALITMYAKSGSINDA 466
Query: 149 WFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
++F + ++ ++W ++I A+ GE+AL F ML G +P H +Y V +A
Sbjct: 467 RWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTH 526
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEK-VFNRLLKRDVVSW 264
G +EQG+ + +++++ +++ + ++D++ ++G +++A + N ++ DV++W
Sbjct: 527 VGLVEQGR-SYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAW 585
Query: 265 NSMLTGCAQH 274
S+L C H
Sbjct: 586 GSLLASCKVH 595
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 46/341 (13%)
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K + WN+ +L YA+ ++++A +F + + VSW A+I G+ + + E A+
Sbjct: 76 VKSVFSWNI-----ILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAI 130
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM+ + PT F+ ++V + A+ L G+ VH+ V+K G V N+L++MY
Sbjct: 131 GMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMY 190
Query: 241 AKSGSIEDAEKVFNR-------------------------------LLKRDVVSWNSMLT 269
AKSG A+ VF+R +++RDVVSWN+M++
Sbjct: 191 AKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMIS 250
Query: 270 GCAQHGLGKATVRWFEKMLRNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G QHG + + F KML + + P++ T L+AC++ L G+ A + + +
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMHKNVELGAY-AA 386
A + + ++G ++ A K I + I + + ALL V+LG A
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGY-----VKLGDINPA 365
Query: 387 ERIFE-LDPHDSGPHILLANIYASAGRLNDAARA-RKMMKE 425
RIF+ L D + Y G DA R M+KE
Sbjct: 366 RRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKE 406
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
GK +HA +IK+G L F+ N L++ YAK+G I DA +VF+ + + V SWN +L+G A+
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 274 HG-LGKA-----------TVRW-------------------FEKMLRNGIAPNQVTFLCV 302
G L +A +V W F +M+ + + P Q T V
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L +C+ L G+ + + KHG+ + + +++ ++G A M ++ T
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELD 393
++ W ++ + V+L E++ E D
Sbjct: 212 SS-WNTMISSHMQSGLVDLAQVQFEQMIERD 241
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/555 (42%), Positives = 348/555 (62%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ I F +I + +++ YAKC + A ++FD+MP +++V+W ++I G+ N+
Sbjct: 32 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 91
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ +F +LR + PN+ ++SSVL A A FGRQVH +K+G YV
Sbjct: 92 YDRAVGVFKDVLREKTVIPNEVSVSSVLSAC-ANMGGLNFGRQVHGVVVKFGLVPLTYVM 150
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+SL+DMY + D+ LF + ++ V+WN L+ G + + E+A F M REG
Sbjct: 151 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 210
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P S+S+V + AS +L QG +H +IK G + +L+ MYAK GS+ DA +V
Sbjct: 211 PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 270
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F + +V+SW +M++ HG + FE ML GI P+ VTF+CVL+ACSH G +
Sbjct: 271 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 330
Query: 313 DEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+EG +F MKK H + P HY VDLLGRAG LD A +FI MP++PT +VWGALLG
Sbjct: 331 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 390
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
ACR + N+++G AAER+FE++P++ G ++LLAN+ +GRL +A R++M +GV+KE
Sbjct: 391 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 450
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
P CSW++ KN +F A+D +H I+K ++ + +K+ GYV ++ V ++ ++ E
Sbjct: 451 PGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEE 510
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E L HSEKLALAF L++ P S I IKKN+R CG CH+ K ASK+ +REIIVRD NR
Sbjct: 511 EQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINR 570
Query: 552 FHHFRDGFCSCGDYW 566
FH F DGFCSCGDYW
Sbjct: 571 FHRFADGFCSCGDYW 585
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 10/309 (3%)
Query: 88 GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
G PNQFT SS+L AS A G+Q+H+ K+G+D N++VG++L+DMYA+ M
Sbjct: 5 GPYPNQFTFSSILSASAATMMV-LHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 63
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALA 206
A +F + +N VSWN++I G + ++A+ F ++LRE P S SSV +A A
Sbjct: 64 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ G L G+ VH V+K G + +V N+L+DMY K ++ K+F + RDVV+WN
Sbjct: 124 NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 183
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++ G Q+ + +F M R GI P++ +F VL + + L +G + K G
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 243
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+ + + + G L A + + + W A++ A ++H A
Sbjct: 244 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHG-------CA 295
Query: 387 ERIFELDPH 395
++ EL H
Sbjct: 296 NQVIELFEH 304
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 170/340 (50%), Gaps = 22/340 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L R VH ++ + N++++ Y KC DE KLF + +D+VTW
Sbjct: 122 CANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 181
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ G+ QND+ E A F M R G+ P++ + S+VL +S + A + G +H +
Sbjct: 182 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQ-GTAIHDQII 240
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GY N+ + SL+ MYA+ + DA+ +F +E N +SW A+I+ + + +
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGNTL 236
F ML EG EP+H ++ V +A + TG +E+G H + G + A +
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYA----CM 356
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG---LGK-ATVRWFEKMLRNG 291
VD+ ++G +++A++ + + S W ++L C ++G +G+ A R FE
Sbjct: 357 VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFE------ 410
Query: 292 IAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ P N ++ + C+ +G L+E LM +GV E
Sbjct: 411 MEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 450
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/566 (41%), Positives = 354/566 (62%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L++ + +HAHI+ S + +D+ + + Y KCG +AR++F+ + +D++ W
Sbjct: 240 CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G+ + Q E A F +ML G+ P++ T ++VL A + G+++HA
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLAR-GKEIHARAA 358
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V G++L++MY++ M DA +F + ++ VSW L+ +A + ++
Sbjct: 359 KDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFT 418
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
TF +ML++G + +Y V A ++ +L+ GK +HA V+K+G V N L+ MY
Sbjct: 419 TFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYF 478
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+EDA +VF + RDVV+WN+++ G Q+G G ++ +E M G+ PN TF+
Sbjct: 479 KCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVN 538
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC L++EG+ FA M K +G+ P E HY VD+L RAG L A I +P++
Sbjct: 539 VLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLK 598
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P+AA+WGALL ACR+H NVE+G AAE +L+P ++G ++ L+ IYA+AG D A+ R
Sbjct: 599 PSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLR 658
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MKE GVKKEP SW+E VH FVA D +HP+ I+ + + +++K +GYVPD+
Sbjct: 659 KFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTR 718
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V+ D + +E + HSEKLA+A+ LISTPPG+ I I KN+RVC DCH+A KF SK+
Sbjct: 719 FVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKIT 778
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REII RD +RFHHF++G CSCGDYW
Sbjct: 779 KREIIARDAHRFHHFKNGECSCGDYW 804
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 205/370 (55%), Gaps = 2/370 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + VH HIL K ++ + NT+L YA CG ++EAR+LFD+ K +V+W
Sbjct: 38 CVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSW 97
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY+ + A LF+ M + L+P++FT S+L A + A + +GR++H +
Sbjct: 98 NVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN-WGREIHVRVM 156
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + VG++L+ MYA+ + DA +F A+ S++EVSW L +A GE++L+
Sbjct: 157 EAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLK 216
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
T+ ML+E P+ +Y +V +A S +LE+GK +HAH+++S V L MY
Sbjct: 217 TYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYM 276
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+ +DA +VF L RDV++WN+M+ G G + F +ML G+AP++ T+
Sbjct: 277 KCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTT 336
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL+AC+ G L G+ A K G+ + +++ +AG + A + MP
Sbjct: 337 VLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRD 396
Query: 362 TAAVWGALLG 371
+ W LLG
Sbjct: 397 VVS-WTTLLG 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R+G + + Y + + L GK VH H+++ G + ++ NTL+ +YA GS+
Sbjct: 21 RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A ++F++ + VVSWN M++G A GL + F M + + P++ TF+ +L+ACS
Sbjct: 81 EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+L+ G+ + + G+ + + + + G + A + M + W
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS-WT 199
Query: 368 ALLGA 372
L GA
Sbjct: 200 TLTGA 204
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/598 (39%), Positives = 358/598 (59%), Gaps = 41/598 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA--------------- 46
C L L +H +I+ D+ N ++N Y+K L+E+
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175
Query: 47 -----------------RKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
RK+F+ MP KD+V+W +I+G ++N E + + +M L
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL 235
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
KP+ FTLSSVL A D G+++H ++ G D ++YV SSL+DMYA+ ++ D+
Sbjct: 236 KPDSFTLSSVLPLI-AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+FT L ++ +SWN++IAG + ++ LR F +ML +P +S+SS+ A A
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L GK +H ++ ++G F+ ++LVDMYAK G+I A+++F+R+ RD+VSW +M+
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
GCA HG + FE+M GI VLTACSH GL+DE YF ++ + G+
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIKA-------VLTACSHGGLVDEAWKYFNSMTRDFGIA 467
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P HY DLLGRAG L+ A FI M I PT ++W LL ACR+HKN+++ A R
Sbjct: 468 PGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANR 527
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I E+DP+++G +ILLANIY++A R +AA+ R M+ G++K PACSW+E KN V+ F+A
Sbjct: 528 ILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMA 587
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D++HP I + + E +++ GYVPD+S V ++++++ + HSE+LA+ F +
Sbjct: 588 GDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGI 647
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I+TP G TI + KN+RVC DCH+A KF SK+V REI+VRD +RFHHF++G CSCGDYW
Sbjct: 648 INTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 34/372 (9%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+ L ++ +LF+ + + W ++I Y+ + P ++ F ML GL P+
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------------- 141
SVLK S A D G +H + ++ G D+++Y G++L++MY++
Sbjct: 110 PSVLK-SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 142 --FDQM---------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
FD+M D +F + K+ VSWN +IAG+AR E+ LR
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM +P F+ SSV +A + +GK +H I+ G +V ++L+DMYAK
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ D+ +VF L +RD +SWNS++ GC Q+GL +R+F +ML I P +F ++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+H L G+ + ++G + + VD+ + G + A + M + +
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 365 VWGALLGACRMH 376
W A++ C +H
Sbjct: 409 -WTAMIMGCALH 419
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/443 (18%), Positives = 171/443 (38%), Gaps = 88/443 (19%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
+Y+ + + D+ LF + ++W ++I + ++L +F ML G P H
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA-------- 249
+ SV + A L G+ +H ++I+ G + GN L++MY+K +E++
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 250 ------------------------EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
K+F + ++D+VSWN+++ G A++GL + T+R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA- 344
+M + P+ T VL + + G+ + G++ + + +D+ +
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 345 ------------------------------GLLDRALKFIREM---PIEPTAAVWGALLG 371
GL D L+F R+M I+P + + +++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 372 AC----RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN------DAARARK 421
AC +H +L Y F+ + + L ++YA G + D R R
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASS---LVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVAND--------DAHPQRAMIHKKWREISEKIKQI 473
M+ + + A + +A+ +F + A ++ + W+ + +
Sbjct: 406 MVSWTAMIMGCALHG-QAPDAIELFEQMETEGIKAVLTACSHGGLVDEAWKYFNSMTRDF 464
Query: 474 GYVPDSSHVLSYADQQEREAKLQ 496
G P H + +D R +L+
Sbjct: 465 GIAPGVEHYAAVSDLLGRAGRLE 487
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 367/605 (60%), Gaps = 45/605 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + R +HAH++ + +I ++ +++ Y++CG L+ A+++F+ M ++ +W
Sbjct: 489 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 548
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY QN + + A+ LF QM G+KP+ F+LSS+L +S +D + GR++H F +
Sbjct: 549 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSML-SSCVSLSDSQKGRELHNFIV 607
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-------------------------------F 150
+ + + L+DMYA+ MD AW
Sbjct: 608 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKN 667
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF +E +N WN+++AG+A K +++ F EML E + ++ +S +
Sbjct: 668 LFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPA 727
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
LE G +H+ +IK G + V T LVDMY+K G+I A VF+ + +++VSWN+M++
Sbjct: 728 LEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMIS 787
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G ++HG K + +E+M + G+ PN+VTFL +L+ACSH GL++EG F M++ + +E
Sbjct: 788 GYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 847
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
+ HY VDLLGRAG L+ A +F+ +MPIEP + WGALLGACR+HK++++G AA+R
Sbjct: 848 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQR 907
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELDP + GP+++++NIYA+AGR + R+MMK GVKK+P SW+E + + +F A
Sbjct: 908 LFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHA 967
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAK-------LQVHSEK 501
HP+ I+ R ++ + K +GY+PD+S +L Q ++ K L HSE+
Sbjct: 968 GSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFIL----QNVKDIKEEEEEEYLLQHSER 1023
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LAL+ LIS P STI + KN+R+CGDCH+A KF SK+ R II RDTNRFHHF +G CS
Sbjct: 1024 LALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCS 1083
Query: 562 CGDYW 566
CGDYW
Sbjct: 1084 CGDYW 1088
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 205/352 (58%), Gaps = 2/352 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH+ ++ FK D + N +++ YAKC + K+FDEM ++ VTW
Sbjct: 286 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 345
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++IS +Q +A++LF +M G K N+F L S+L AS AG D GR++H +
Sbjct: 346 NSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS-AGLADIGKGRELHGHLV 404
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + ++ +GS+L+DMY++ +++A +F +L +NEVS+NAL+AG+ ++ + E+AL
Sbjct: 405 RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALE 464
Query: 182 TFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ +M E G +P F+++++ T A+ + QG+ +HAH+I++ V LV MY
Sbjct: 465 LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMY 524
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
++ G + A+++FNR+ +R+ SWNSM+ G Q+G + +R F++M NGI P+ +
Sbjct: 525 SECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLS 584
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+L++C +G+ + ++ +E E V VD+ + G +D A K
Sbjct: 585 SMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 636
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 197/377 (52%), Gaps = 11/377 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE---ARKLFDEMPVKDM 58
C + + +H ++ + + D + IL YA+ GCLD+ ARKLF+EMP +++
Sbjct: 81 CIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNL 140
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-RQVH 117
W +I Y++ D + L+ +M G ++FT SV+KA A +D G RQ+
Sbjct: 141 TAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKA--CIAMEDMGGVRQLQ 198
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+ +K G + N++VG +L+D YARF MDDA +E + V+WNA+IAG+ + E
Sbjct: 199 SSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWE 258
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F ML+ G P +F+++S + S + GK VH+ +I G + FVGN L+
Sbjct: 259 EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALI 318
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK E KVF+ + +R+ V+WNS+++ AQ G + F +M +G N+
Sbjct: 319 DMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRF 378
Query: 298 TFLCVLTACSHAGLLDEGQG--YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+L A AGL D G+G + ++ + + VD+ + G+++ A + R
Sbjct: 379 NLGSILMA--SAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436
Query: 356 EMPIEPTAAVWGALLGA 372
+ +E + ALL
Sbjct: 437 SL-LERNEVSYNALLAG 452
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 228/438 (52%), Gaps = 17/438 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ + R + + ++ + ++ + +++ YA+ G +D+A DE+ +VTW
Sbjct: 185 CIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTW 244
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY + E A +F +ML++G+ P+ FT +S L+ GA + D G+QVH+ +
Sbjct: 245 NAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG-GKQVHSKLI 303
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + +VG++L+DMYA+ D + +F + +N+V+WN++I+ A+ AL
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G++ F+ S+ A A + +G+ +H H++++ +G+ LVDMY+
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYS 423
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFL 300
K G +E+A +VF LL+R+ VS+N++L G Q G + + + M +GI P+Q TF
Sbjct: 424 KCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFT 483
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+LT C++ ++G+ A + + + V + G L+ A + M E
Sbjct: 484 TLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-E 542
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIF-ELDPHDSGPHIL-LANIYASAGRLNDAAR 418
A W +++ + + + A R+F ++ + P L+++ +S L+D+ +
Sbjct: 543 RNAYSWNSMIEGYQQNGETQ----EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK 598
Query: 419 ARKM--------MKESGV 428
R++ M+E G+
Sbjct: 599 GRELHNFIVRNTMEEEGI 616
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFN 254
YSS+ + S ++GK +H +I +G A++ ++ +YA+SG ++D A K+F
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ +R++ +WN+M+ A+ +R + +M +G ++ TF V+ AC +
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGG 193
Query: 315 GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGA 372
+ + + K G+ VD R G +D A+ + E IE T+ V W A++
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDE--IEGTSVVTWNAVIAG 250
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/622 (38%), Positives = 366/622 (58%), Gaps = 68/622 (10%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD-------------- 57
R VH+ ++ + + + N++L Y KCG + AR +F+ M V+
Sbjct: 183 RKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQ 242
Query: 58 -----------------MVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSV 99
+V+W A+I+GY+QN + A+ FS+ML ++P++FT++SV
Sbjct: 243 GRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSV 302
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGY---------------------------------D 126
L A A K G+Q+H++ L+ G D
Sbjct: 303 LSAC-ANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVAD 361
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
NV ++LL+ Y + A +F + +++ ++W A+I G+ + + ++A+ F M
Sbjct: 362 LNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSM 421
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+R G EP + ++V +A AS L GK +H I+S + V N ++ +YA+SGS+
Sbjct: 422 IRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSV 481
Query: 247 EDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
A +VF+++ +++ V+W SM+ AQHGLG+ + FE+MLR G+ P++VT++ V +A
Sbjct: 482 PLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSA 541
Query: 306 CSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
C+HAG +D+G+ Y+ ++ +HG+ PE +HY VDLL RAGLL A +FI+ MP+ P
Sbjct: 542 CTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTV 601
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
VWG+LL ACR+ KN +L AAE++ +DP +SG + LAN+Y++ GR NDAAR K+ K
Sbjct: 602 VWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRK 661
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
+ VKKE SW ++ VH+F A+D HPQR I KK E+ E+IK+ G+VPD + VL
Sbjct: 662 DKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLH 721
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D + +E L HSEKLA+AF LISTP +T+ I KN+RVC DCH+A KF SKVV+REI
Sbjct: 722 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREI 781
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHFRDG+CSC DYW
Sbjct: 782 IVRDATRFHHFRDGYCSCKDYW 803
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 217/469 (46%), Gaps = 70/469 (14%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N++L+ YAK G L +AR +F +MP +D V+WT ++ G ++ + +A+ F M+ GL
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 91 PNQFTLSSVLKASGAGATDDK-FGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------- 141
P+QF L++VL S AT+ + GR+VH+F +K G V V +S+L MY +
Sbjct: 161 PSQFMLTNVL--SSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETAR 218
Query: 142 --FD---------------------QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
F+ +MD A +F +E ++ VSWNA+IAG+ + +
Sbjct: 219 AVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDM 278
Query: 179 ALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL+ FS ML EP F+ +SV +A A+ L+ GK +H++++++G + + N L+
Sbjct: 279 ALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALI 338
Query: 238 DMYAKSGSIEDAEK---------------------------------VFNRLLKRDVVSW 264
YAKSGS+E A + VF+ + RDV++W
Sbjct: 339 STYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAW 398
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+M+ G Q+G + F M+R+G PN T VL+AC+ L G+ +
Sbjct: 399 TAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIR 458
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
E + + + R+G + A + ++ W +++ A H E
Sbjct: 459 SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIV 518
Query: 385 AAERIFELDPH-DSGPHILLANIYASAGRLNDAAR-ARKMMKESGVKKE 431
E + + D +I + + AG ++ R +M+ E G+ E
Sbjct: 519 LFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPE 567
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 158/307 (51%), Gaps = 39/307 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD----------------- 44
C +L+ LK + +H++IL + + N +++ YAK G ++
Sbjct: 306 CANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVI 365
Query: 45 ----------------EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+AR++FD M +D++ WTA+I GY QN Q + A+ LF M+R G
Sbjct: 366 SFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSG 425
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN TL++VL A + A +G+Q+H ++ + +V V ++++ +YAR + A
Sbjct: 426 PEPNSHTLAAVLSACASLAYLG-YGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLA 484
Query: 149 WFLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + + E V+W ++I A+ GE+A+ F EMLR G +P +Y VF+A
Sbjct: 485 RRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTH 544
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
G +++GK + ++ G +V + + +VD+ A++G + +A + R+ + D V W
Sbjct: 545 AGFIDKGKRYYEQMLNEHG-IVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVW 603
Query: 265 NSMLTGC 271
S+L C
Sbjct: 604 GSLLAAC 610
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N + +SLL MYA+ ++ DA +F + ++ VSW ++ G R A++TF +M+
Sbjct: 96 NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P+ F ++V ++ A+T + G+ VH+ VIK G V N+++ MY K G E
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215
Query: 248 DAEKVFNRLL-------------------------------KRDVVSWNSMLTGCAQHGL 276
A VF R+ +R +VSWN+++ G Q+GL
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275
Query: 277 GKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+++F +ML + + P++ T VL+AC++ +L G+ + + + G+
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335
Query: 336 TFVDLLGRAGLLDRALKFI 354
+ ++G ++ A + +
Sbjct: 336 ALISTYAKSGSVETARRIM 354
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C L L + +H + S + +++ N I+ YA+ G + AR++FD++ K+ VT
Sbjct: 440 CASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT++I +Q+ E AI+LF +MLR+G+KP++ T V A DK R
Sbjct: 500 WTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQML 559
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKA 179
++G + + ++D+ AR + +A F+ + + V W +L+A + +
Sbjct: 560 NEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNAD-- 617
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+E+ E S ++ALA+ S G+W
Sbjct: 618 ---LAELAAEKLLSIDPDNSGAYSALANVYS-ACGRW 650
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 38/194 (19%)
Query: 214 GKWVHAHVIKSG-------------------------------------GQLVAFVGNTL 236
G+ +HAH +K+G + AF N+L
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MYAKSG + DA VF ++ +RD VSW M+ G + G V+ F M+ G+AP+Q
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
VL++C+ G+ + + K G+ + + + G+ G + A
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 357 MPIEPTAAVWGALL 370
M + ++ W A++
Sbjct: 224 MKVRSESS-WNAMV 236
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/589 (38%), Positives = 358/589 (60%), Gaps = 26/589 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD---- 57
C+ + + + +H + + +D+ + N ++ Y++CG L AR LFD+M +D
Sbjct: 119 CSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSW 178
Query: 58 ------------------MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV 99
+V+WTA+I+GY + + E LF +M+ + PN T+ S+
Sbjct: 179 STMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSL 238
Query: 100 LKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK 158
+ + G GA + G+++HA+ L+ G+ ++ + ++L+DMY + ++ A +F ++++K
Sbjct: 239 IISCGFVGAV--QLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNK 296
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
+ ++W A+I+ +A+ + + A + F +M G P + S+ + A G+L+ GKW H
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFH 356
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
A++ K G ++ + L+DMYAK G I A+++F+ + RD+ +WN M+ G HG G+
Sbjct: 357 AYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGE 416
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTF 337
++ F +M G+ PN +TF+ L ACSHAGL+ EG+G F ++ G+ P+ HY
Sbjct: 417 KALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCM 476
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
VDLLGRAGLLD A K I MP+ P A+WGA+L AC++HKN +G AA + L+P +
Sbjct: 477 VDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNC 536
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
G +L++NIYA+A R ND A RK +K++G+KKEP S +E VH F D AHP
Sbjct: 537 GYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIE 596
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
I + E+S+K+K+ GY+PD+S VL D++E+E L HSEKLA+AF LIST PG+ I
Sbjct: 597 KISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPI 656
Query: 518 HIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ KN+R+C DCH+ K SK+ +R IIVRD NRFHHFR+G CSCG YW
Sbjct: 657 RVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+S AL T++ M + E F SV A + GK +H +K+G FV
Sbjct: 87 ESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFV 146
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT-------GCAQHGLGKATV---- 281
N L+ MY++ GS+ A +F+++ +RDVVSW++M+ G +Q + T
Sbjct: 147 VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAG 206
Query: 282 -----------RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
R F +M+ + PN +T L ++ +C G + G+ A + ++G
Sbjct: 207 YIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A VD+ G+ G + A M W A++ A
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/556 (40%), Positives = 352/556 (63%), Gaps = 6/556 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V + + + ++ M NT++ + G + ++++LF M +D ++WT +I+G QN
Sbjct: 191 VASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGL 250
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF M + G+ +Q+T SVL A G G K G+++H ++ GY+ NV+VGS
Sbjct: 251 EAEAMDLFRDMRQEGMAMDQYTFGSVLTACG-GLRALKEGKEIHTLIIRSGYNHNVFVGS 309
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMY + + A +F + +KN VSW A++ G+ + E+A+R F +M R G EP
Sbjct: 310 ALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEP 369
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF--VGNTLVDMYAKSGSIEDAEK 251
F+ SV ++ A+ SLE+G H + SG L++F V N L+ +Y K GSIED+ +
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSG--LISFITVSNALITLYGKCGSIEDSNQ 427
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+ + RD VSW ++++G AQ G T+ FE+ML G+ P+ VTF+ VL+ACS AGL
Sbjct: 428 LFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGL 487
Query: 312 LDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ GQ YF +++K HG+ P HY +DL GRAG L+ A FI +MP P + W LL
Sbjct: 488 VERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLL 547
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
+CR++ N E+G +AAE + ELDP + +ILL++IYA+ G+ ++ A+ R+ M+E G +K
Sbjct: 548 SSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARK 607
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
EP SW++ K+ V++F A+D + P I+ + +++ K+ + GYVPD+S VL + E
Sbjct: 608 EPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSE 667
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ L HSEKLA+AF L+ P G I + KN+RVCGDCH+A K+ SK+ +REI+VRD
Sbjct: 668 KMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAV 727
Query: 551 RFHHFRDGFCSCGDYW 566
RFH F+DG CSCGD+W
Sbjct: 728 RFHLFKDGTCSCGDFW 743
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 215/457 (47%), Gaps = 75/457 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-L 89
NT+L+AY+K G L +++F MP +D V+W +LISGY A+ ++ M++ G L
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 90 KPNQFTLSS-VLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR------- 141
N+ T S+ +L S G D GRQ+H +K+G+ V+VGSSL+DMYA+
Sbjct: 135 NLNRITFSTMLLLVSSQGCVD--LGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 142 ---FDQMD---------------------DAWFLFTALESKNEVSWNALIAGHARKSEGE 177
FD++ D+ LF ++ ++ +SW +I G +
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A+ F +M +EG +++ SV TA +L++GK +H +I+SG FVG+ LV
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY K S+ AE VF R+ ++VVSW +ML G Q+G + VR F M RNGI P+
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T V+++C++ L+EG + G+ + L G+ G ++ + + EM
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Query: 358 P----------------------------------IEPTAAVWGALLGACRMHKNVELGA 383
++P A + A+L AC VE G
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492
Query: 384 YAAERIFELDPHDSGP----HILLANIYASAGRLNDA 416
E + L H P + + +++ AGRL +A
Sbjct: 493 QYFESM--LKDHGIIPFSDHYTCMIDLFGRAGRLEEA 527
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 157/277 (56%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ LKE + +H I+ S + +++ + + +++ Y KC + A +F M K++V+W
Sbjct: 280 CGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY QN E A+ +F M R G++P+ FTL SV+ + A+ ++ G Q H L
Sbjct: 340 TAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEE-GAQFHCQAL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++D+ LF + ++EVSW AL++G+A+ + + +
Sbjct: 399 VSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETID 458
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F ML +G +P ++ +V +A + G +E+G+ ++K G ++ F ++D+
Sbjct: 459 LFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHG-IIPFSDHYTCMIDL 517
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
+ ++G +E+A+ N++ D + W ++L+ C +G
Sbjct: 518 FGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 195/470 (41%), Gaps = 114/470 (24%)
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ WN ++L Y++ + +F+ + +++ VSWN+LI+G+ +A++T++
Sbjct: 72 FSWN-----TMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYN 126
Query: 185 EMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK- 242
M+++G ++S++ ++S G ++ G+ +H ++K G FVG++LVDMYAK
Sbjct: 127 SMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKM 186
Query: 243 ------------------------------SGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
SG ++D++++F+ + +RD +SW +M+TG
Sbjct: 187 GLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLI 246
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG------ 326
Q+GL + F M + G+A +Q TF VLTAC L EG+ L+ + G
Sbjct: 247 QNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVF 306
Query: 327 --------------VEPEEAHY--------VTFVDLL---GRAGLLDRALKFIREMP--- 358
V EA + V++ +L G+ G + A++ +M
Sbjct: 307 VGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG 366
Query: 359 IEPTAAVWGALLGACRMHKNVELGAY-------------------------------AAE 387
IEP G+++ +C ++E GA +
Sbjct: 367 IEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSN 426
Query: 388 RIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
++F E+ D L + YA G+ N+ + M G+K + F
Sbjct: 427 QLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAV-----------TF 475
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
+A A + ++ + + +K G +P S H D R +L+
Sbjct: 476 IAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLE 525
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 23/233 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L+E H L S + I + N ++ Y KCG ++++ +LFDEM +D V+W
Sbjct: 381 CANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TAL+SGY+Q + I LF +ML GLKP+ T +VL A ++ G+Q L
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER-GQQYFESML 499
Query: 122 KYGYDWNVYVGSS----LLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEG 176
K D + S ++D++ R ++++A + S + + W L++ R
Sbjct: 500 K---DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSS-CRLYGN 555
Query: 177 EKALRTFSEMLREGFEPT----HFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
E+ + +E L E +P + SS++ A +GKW + ++ G
Sbjct: 556 EEIGKWAAESLLE-LDPQNPAGYILLSSIYAA--------KGKWSNVAQLRRG 599
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P F Y+++ A + G++ + HV Q +F NT++ Y+KSG + +++
Sbjct: 38 PETFLYNNLINAYSKLGNITYAR----HVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEI 93
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGL 311
F+ + RD VSWNS+++G +G V+ + M+++G+ N++TF +L S G
Sbjct: 94 FSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGC 153
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+D G+ + K G + VD+ + GL+ A + E+
Sbjct: 154 VDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEV 199
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/566 (40%), Positives = 348/566 (61%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VH + + NT+L+ YAKCG LD A +FD M V+ +VTW
Sbjct: 8 CANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTW 67
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+ Y++ + AI LF +M R G+ P+ FT+++VL A + + G+ VH +
Sbjct: 68 TSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN-GKDVHNYIR 126
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N++V ++L+DMYA+ M+DA +F + K+ +SWN +I G+++ S +AL
Sbjct: 127 ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALS 186
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ E +P + + + A AS SL++GK VH H++++G V N LVDMY
Sbjct: 187 LFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYV 245
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G A +F+ + +D+++W M+ G HG G + F +M + GI P++V+F+
Sbjct: 246 KCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFIS 305
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLLDEG +F +M+ V+P+ HY VDLL R+G L A KFI+ MPIE
Sbjct: 306 ILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIE 365
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR+H +V+L AE +FEL+P ++G ++LLAN YA A + + + R
Sbjct: 366 PDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLR 425
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ + G+KK P CSW+E K+ VH+F+A + +HPQ I + + K+K+ GY P +
Sbjct: 426 QKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTR 485
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L AD ++E L HSEKLA+AF +++ PP TI + KN+RVCGDCH KF SK +
Sbjct: 486 YALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTL 545
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFHHF+DG C C +W
Sbjct: 546 GREIVLRDSNRFHHFKDGVCCCRGFW 571
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/535 (43%), Positives = 338/535 (63%), Gaps = 2/535 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L+ YAKCG +++AR +F+ +P D++ W+ LIS Y+Q+ Q E A +F +M+R + PN
Sbjct: 292 LLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPN 351
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+F+LS VL+A A D G+Q+H +K GY+ ++VG++L+D+YA+ M+++ +F
Sbjct: 352 EFSLSGVLQACANVAFLD-LGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIF 410
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+L NEVSWN +I G+ + E AL F EM T ++SSV A A+T S++
Sbjct: 411 RSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIK 470
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+H+ + KS V N+L+D YAK G I DA KVF +++ DVVSWN++++G A
Sbjct: 471 HTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYA 530
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEE 331
HG + F +M ++ PN VTF+ +L+ C GL+++G F ++ H ++P
Sbjct: 531 LHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSM 590
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY V LLGRAG L+ ALKFI ++P P+ VW ALL +C +HKNV LG ++AE++ E
Sbjct: 591 DHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLE 650
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
++P D ++LL+N+YA+AG L+ A RK M+ GVKKE SWVE K VH F
Sbjct: 651 IEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSA 710
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
HP +I+ ++ K + GYVPD + VL D++E+ L VHSE+LALA+ L T
Sbjct: 711 DHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMT 770
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PPG I I KN+R C DCH+ FK SK+V+REI+VRD NRFHHF +G CSCGDYW
Sbjct: 771 PPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 207/388 (53%), Gaps = 9/388 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+++++AY+ CG + AR +FD + KD VTWTA++S YS+ND PE+A+ FS+M G K
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAK 248
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN F L+SVLKA+ + G+ +H +K D +VG +LLDMYA+ ++DA
Sbjct: 249 PNPFVLTSVLKAA-VCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDART 307
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + + + W+ LI+ +A+ + E+A F M+R P FS S V A A+
Sbjct: 308 VFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAF 367
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L+ G+ +H VIK G + FVGN L+D+YAK ++E++ ++F L + VSWN+++ G
Sbjct: 368 LDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVG 427
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q G + + F++M + QVTF VL AC++ + +L++K +
Sbjct: 428 YCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNND 487
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ +D + G + ALK + E I+ W A++ +H A E
Sbjct: 488 TIVCNSLIDTYAKCGCIRDALK-VFESIIQCDVVSWNAIISGYALHGR---ATDALELFN 543
Query: 391 ELDPHDSGPH----ILLANIYASAGRLN 414
++ D+ P+ + L ++ S G +N
Sbjct: 544 RMNKSDTKPNDVTFVALLSVCGSTGLVN 571
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 184/361 (50%), Gaps = 7/361 (1%)
Query: 1 KCTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
+C + R VHA ++ G + D N +LN YAK G L AR+LFD MP ++M
Sbjct: 56 RCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNM 115
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ--V 116
V++ L+ GY+ E A LF ++ R G + N F L+++LK A D G +
Sbjct: 116 VSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM---DAPGLTCCI 172
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA K G+D N +VGSSL+D Y+ + A +F + K+ V+W A+++ ++
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIP 232
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E AL TFS+M G +P F +SV A S GK +H +K+ VG L
Sbjct: 233 EDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGAL 292
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+DMYAK G IEDA VF + DV+ W+ +++ AQ + F +M+R+ + PN+
Sbjct: 293 LDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNE 352
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+ VL AC++ LD GQ L+ K G E E +D+ + ++ +L+ R
Sbjct: 353 FSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRS 412
Query: 357 M 357
+
Sbjct: 413 L 413
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 20/339 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L + +H ++ +++++ + N +++ YAKC ++ + ++F + + V+W
Sbjct: 362 CANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSW 421
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY Q+ E+A+ +F +M + Q T SSVL+A A K Q+H+
Sbjct: 422 NTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRAC-ANTASIKHTVQIHSLIE 480
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ + V +SL+D YA+ + DA +F ++ + VSWNA+I+G+A AL
Sbjct: 481 KSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALE 540
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGNTL 236
F+ M + +P ++ ++ + STG + QG H IK +
Sbjct: 541 LFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHY----TCI 596
Query: 237 VDMYAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGI 292
V + ++G + DA K + + W ++L+ C H LGK + EK+L I
Sbjct: 597 VRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSA---EKVLE--I 651
Query: 293 AP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
P ++ T++ + + AG+LD+ M+ GV+ E
Sbjct: 652 EPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKE 690
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/569 (41%), Positives = 351/569 (61%), Gaps = 10/569 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ + +L+ AR+V + D ++ Y G +D+AR+LFDE+P KD+V+W
Sbjct: 173 SQVGELRHARLV----FDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWN 228
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I+GY Q+ + E A+ F++M + PNQ T+ SVL A G + G+ + ++
Sbjct: 229 AMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGH-LRSLELGKWIGSWVRD 287
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G+ N+ + ++L+DMY++ ++ A LF +E K+ + WN +I G+ S E+AL
Sbjct: 288 RGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVL 347
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK----SGGQLVAFVGNTLVD 238
F MLRE P ++ +V A AS G+L+ GKWVHA++ K +G + +++
Sbjct: 348 FEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIV 407
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G +E AE+VF + R + SWN+M++G A +G + + FE+M+ G P+ +T
Sbjct: 408 MYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDIT 467
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ VL+AC+ AG ++ G YF+ M K +G+ P+ HY +DLL R+G D A + M
Sbjct: 468 FVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM 527
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
+EP A+WG+LL ACR+H VE G Y AER+FEL+P +SG ++LL+NIYA AGR +D A
Sbjct: 528 EMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVA 587
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
+ R + + G+KK P C+ +E VH F+ D HPQ I + E+ +++ G+VP
Sbjct: 588 KIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVP 647
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D+S VL D++ +E L HSEKLA+AF LIST PGSTI I KN+RVC +CHSA K S
Sbjct: 648 DTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLIS 707
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ REII RD NRFHHF+DGFCSC D W
Sbjct: 708 KIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 201/420 (47%), Gaps = 46/420 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEM--PVK 56
KC + LK+ +H+ I+ S N + Q+ ++ A + L A LF +
Sbjct: 34 KCPDIPSLKQ---IHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPP 90
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
++ W LI +S P +++ LFSQML GL PN T S+ K S A + +Q+
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFK-SCAKSKATHEAKQL 149
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYAR----------FDQ---------------------M 145
HA LK + +V +SL+ MY++ FD+ +
Sbjct: 150 HAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHV 209
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
DDA LF + +K+ VSWNA+IAG+ + E+AL F+ M P + SV +A
Sbjct: 210 DDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSAC 269
Query: 206 ASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
SLE GKW+ + V G G+ + V N LVDMY+K G I A K+F+ + +DV+ W
Sbjct: 270 GHLRSLELGKWIGSWVRDRGFGKNLQLV-NALVDMYSKCGEIGTARKLFDGMEDKDVILW 328
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
N+M+ G L + + FE MLR + PN VTFL VL AC+ G LD G+ A + K
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK 388
Query: 325 H----GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
+ G + + + + + + G ++ A + R M A+ W A++ M+ + E
Sbjct: 389 NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMISGLAMNGHAE 447
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 152/283 (53%), Gaps = 13/283 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL+ L+ + + + + F ++ + N +++ Y+KCG + ARKLFD M KD++ W
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW 328
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
+I GY E A++LF MLR + PN T +VL A + GA D G+ VHA+
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALD--LGKWVHAYI 386
Query: 121 LK----YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
K G NV + +S++ MYA+ ++ A +F ++ S++ SWNA+I+G A
Sbjct: 387 DKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHA 446
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVG 233
E+AL F EM+ EGF+P ++ V +A G +E G + + K G +L +
Sbjct: 447 ERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHY-- 504
Query: 234 NTLVDMYAKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQHG 275
++D+ A+SG ++A+ + N ++ D W S+L C HG
Sbjct: 505 GCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 10/229 (4%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS--IEDAEKVFNRLLKR--D 260
LA + K +H+ +IKSG F + L++ A S S + A +F+ + + +
Sbjct: 32 LAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPN 91
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+ WN+++ + +++ F +ML +G+ PN TF + +C+ + E + A
Sbjct: 92 IFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHA 151
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
K + + + + + + G L R + + + A + AL+ +V+
Sbjct: 152 HALKLALHLHPHVHTSLIHMYSQVGEL-RHARLVFDKSTLRDAVSFTALITGYVSEGHVD 210
Query: 381 LGAYAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
A R+F E+ D + Y +GR +A M+E+ V
Sbjct: 211 ----DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADV 255
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/556 (41%), Positives = 348/556 (62%), Gaps = 2/556 (0%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R VH L + D + +++ Y+K G ++EA LF D+ +W A++ G++ +
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVS 478
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
D A+ LFS M G K +Q T ++ KA+G + G+Q+HA +K + ++++V
Sbjct: 479 DNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQ-GKQIHAVVIKMRFHYDLFV 537
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
S +LDMY + +M A +F + S ++V+W +I+G E E+AL T+ +M G
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGV 597
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P ++++++ A + +LEQGK +HA+++K FV +LVDMYAK G+IEDA
Sbjct: 598 QPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYG 657
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F R+ R V WN+M+ G AQHG + + +F +M G+ P++VTF+ VL+ACSH+GL
Sbjct: 658 LFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGL 717
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ F M+K +GVEPE HY VD L RAG + A K + MP E +A ++ LL
Sbjct: 718 TSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLL 777
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
ACR+ + E G AE++F +DP DS ++LL+NIYA+A + +A AR MMK VKK
Sbjct: 778 NACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKK 837
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
EP SW++ KN VH+FVA D +H + +I+ K + ++IK+ GYVPD+ L ++++
Sbjct: 838 EPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEED 897
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E+ L HSEKLA+A+ L+ TPP +T+ + KN+RVCGDCH+A K+ S V +REI++RD N
Sbjct: 898 KESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDAN 957
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHFR G CSCGDYW
Sbjct: 958 RFHHFRSGICSCGDYW 973
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 203/376 (53%), Gaps = 1/376 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ + +H ++ + +++ N+ +N Y K G ++ AR++F +M D+++W +
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISG +++ E ++ LF +LR GL P+QFT++SVL+A + GRQVH LK G
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +V ++L+D+Y++ +M++A LF + + SWNA++ G +ALR FS
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS 489
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G + ++++ A L+QGK +HA VIK FV + ++DMY K G
Sbjct: 490 LMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ A KVFN++ D V+W ++++GC ++G + + + +M G+ P++ TF ++
Sbjct: 550 EMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVK 609
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS L++G+ A + K + + VD+ + G ++ A R M + A
Sbjct: 610 ACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR-SVA 668
Query: 365 VWGALLGACRMHKNVE 380
+W A++ H N E
Sbjct: 669 LWNAMIVGLAQHGNAE 684
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 46/396 (11%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ + ++N YAK + EAR LFD MPV+D+V W ++ Y + + + LFS
Sbjct: 156 DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH 215
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R GL+P+ ++ ++L G ++ QV A+ K
Sbjct: 216 RSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK----------------------- 252
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
LF + + WN ++ + + EG +A+ F +M++ +Y + + +
Sbjct: 253 -----LFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
AS LE GK +H V++ G V N+ ++MY K+GS+ A ++F ++ + D++SWN
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN 367
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE----GQGYFAL 321
++++GCA+ GL + ++R F +LR+G+ P+Q T VL ACS L+E G+
Sbjct: 368 TVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTC 424
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRA-LKFIREMPIEPTAAVWGALLGACRMHKNVE 380
K G+ + +D+ + G ++ A L F + + A W A++ + N
Sbjct: 425 ALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFD--LASWNAMMHGFTVSDNYR 482
Query: 381 LGAYAAERIFELDPHDSGP---HILLANIYASAGRL 413
A R+F L H+ G I AN +AG L
Sbjct: 483 ----EALRLFSL-MHERGEKADQITFANAAKAAGCL 513
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 159/367 (43%), Gaps = 37/367 (10%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQN- 71
HA I+ S D + N ++ YAKCG L ARKLFD P +D+VT+ A+++ Y+
Sbjct: 36 HAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTG 95
Query: 72 -----DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
++ A +F + + + + TLS + K + + + +K G
Sbjct: 96 ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSA-SEALQGYAVKIGLQ 154
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
W+V+V +L+++YA+F ++ +A LF + ++ V WN ++ + G++ L FS
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAF 214
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R G P S ++ + E + Q+ A+
Sbjct: 215 HRSGLRPDCVSVRTILMGVGKKTVFE----------RELEQVRAY--------------- 249
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A K+F DV WN L+ Q G G V F M+++ + + +T++ +L+
Sbjct: 250 --ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L+ G+ + + G + + + +++ +AG ++ A + +M E W
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLISW 366
Query: 367 GALLGAC 373
++ C
Sbjct: 367 NTVISGC 373
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 8/204 (3%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF--TALESKNEVSWNA 165
+D G++ HA + G + + YV ++L+ MYA+ + A LF T ++ V++NA
Sbjct: 27 SDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNA 86
Query: 166 LIAGHARKSE------GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
++A +A E +A F + + T + S +F GS + +
Sbjct: 87 ILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQG 146
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+ +K G Q FV LV++YAK I +A +F+R+ RDVV WN M+ + G G
Sbjct: 147 YAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVL 303
+ F R+G+ P+ V+ +L
Sbjct: 207 VLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L++ + +HA+I+ D + ++++ YAKCG +++A LF M + + W
Sbjct: 611 CSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALW 670
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I G +Q+ E A+ F++M G+ P++ T VL A S +G T D + + +
Sbjct: 671 NAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY-KNFDSMQ 729
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG + + S L+D +R + +A
Sbjct: 730 KTYGVEPEIEHYSCLVDALSRAGHIQEA 757
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 366/590 (62%), Gaps = 25/590 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + + +E + VHAH++ + + + ++ ++ Y KC L +A +FDEMP +++V+
Sbjct: 252 ECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVS 311
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGL---------------------KPNQFTLSSV 99
WTA+IS YSQ A+ LF +++ L +PN+FT ++V
Sbjct: 312 WTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATV 371
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKN 159
L S + GRQ+H+ +K Y+ +V+VGSSLLDMYA+ ++ +A +F L ++
Sbjct: 372 L-TSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERD 430
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
VS A+I+G+A+ E+AL F + EG + + +Y+ V TAL+ +L+ GK VH
Sbjct: 431 VVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHN 490
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
HV++S + N+L+DMY+K G++ + ++F+ + +R V+SWN+ML G ++HG G+
Sbjct: 491 HVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGRE 550
Query: 280 TVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK--KHGVEPEEAHYVT 336
++ F M + P+ VT L VL+ CSH GL D+G F M K VEP+ HY
Sbjct: 551 VLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGC 610
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
VDLLGR+G ++ A +FI++MP EPTAA+WG+LLGACR+H NV++G +A +++ E++P +
Sbjct: 611 VVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGN 670
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
+G +++L+N+YASAGR D + R +M + V KEP S +E +H F A+D +HP+R
Sbjct: 671 AGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRR 730
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGST 516
I K +E+S K++GYVPD S VL D++++E L HSEKLAL+F LI++P
Sbjct: 731 EEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVP 790
Query: 517 IHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I + KN+R+C DCH+ K+ SKV RE+ +RD NRFH G CSC DYW
Sbjct: 791 IRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 21/195 (10%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M GF +Y+++ + + +G+ VHAH+IK+ F+ L+ +Y K
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF---EKMLRNGI--------- 292
S+ DA VF+ + +R+VVSW +M++ +Q G + F K+ G+
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 293 ---------APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
PN+ TF VLT+C+ + G+ +L+ K E + +D+ +
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAK 412
Query: 344 AGLLDRALKFIREMP 358
G + A +P
Sbjct: 413 DGKIHEARTVFECLP 427
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 357/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ +H+ I+ + F+ + + + +++ YAK G LD A + KD+V+W
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 519
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+GY+Q + + A+ F QML G++ ++ L++ + A AG K G+Q+HA
Sbjct: 520 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQAC 578
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ ++ ++L+ +Y+R ++++++ F E+ + ++WNAL++G + E+ALR
Sbjct: 579 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 638
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M REG + +F++ S A + T +++QGK VHA + K+G V N L+ MYA
Sbjct: 639 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 698
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI DAEK F + ++ VSWN+++ ++HG G + F++M+ + + PN VT +
Sbjct: 699 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 758
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+D+G YF M ++G+ P+ HYV VD+L RAGLL RA +FI+EMPI+
Sbjct: 759 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 818
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VW LL AC +HKN+E+G +AA + EL+P DS ++LL+N+YA + + + R
Sbjct: 819 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 878
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MKE GVKKEP SW+E KN++H F D HP IH+ +++++++ +IGYV D
Sbjct: 879 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 938
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L+ ++++ + +HSEKLA++F L+S P I++ KN+RVC DCH+ KF SKV
Sbjct: 939 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 998
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD RFHHF G CSC DYW
Sbjct: 999 NREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 190/393 (48%), Gaps = 14/393 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+ +H +L F +D + N +++ Y G L A +F M +D VT+
Sbjct: 258 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 317
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+G SQ E A+ LF +M GL+P+ TL+S++ A A T + G+Q+HA+
Sbjct: 318 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTT 376
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ N + +LL++YA+ ++ A F E +N V WN ++ + + + R
Sbjct: 377 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 436
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M E P ++Y S+ G LE G+ +H+ +IK+ QL A+V + L+DMYA
Sbjct: 437 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 496
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A + R +DVVSW +M+ G Q+ + F +ML GI ++V
Sbjct: 497 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 556
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
++AC+ L EGQ A G + V L R G ++ + + E
Sbjct: 557 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQ 611
Query: 362 TAA----VWGALLGACRMHKNVELGAYAAERIF 390
T A W AL+ + N E A R+F
Sbjct: 612 TEAGDNIAWNALVSGFQQSGNNE----EALRVF 640
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 214/447 (47%), Gaps = 41/447 (9%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E R +H+ IL ++ + + + Y G L A K+FDEMP + + TW +I
Sbjct: 61 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 120
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ + LF +M+ + PN+ T S VL+A G+ Q+HA L G
Sbjct: 121 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 180
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V + L+D+Y+R +D A +F L K+ SW A+I+G ++ +A+R F +M
Sbjct: 181 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 240
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G PT +++SSV +A SLE G+ +H V+K G +V N LV +Y G++
Sbjct: 241 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 300
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
AE +F+ + +RD V++N+++ G +Q G G+ + F++M +G+ P+ T ++ ACS
Sbjct: 301 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 360
Query: 308 HAGLLDEGQGYFALMKKHG----------------------------VEPEEAHYVTFVD 339
G L GQ A K G +E E + V +
Sbjct: 361 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 420
Query: 340 LLGRAGLLD---RALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAERI---- 389
+L GLLD + + R+M IE P + ++L C ++ELG +I
Sbjct: 421 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 480
Query: 390 FELDPHDSGPHILLANIYASAGRLNDA 416
F+L+ + +L ++YA G+L+ A
Sbjct: 481 FQLNAYVCS---VLIDMYAKLGKLDTA 504
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 150/387 (38%), Gaps = 60/387 (15%)
Query: 190 GFEPTHFSYSSVFTA-LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P H + + L + GSL++G+ +H+ ++K G + L D Y G +
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A KVF+ + +R + +WN M+ A L F +M+ + PN+ TF VL AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 309 AGL-LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD------------------- 348
+ D + A + G+ +DL R G +D
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218
Query: 349 ------------RALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
A++ +M I PT + ++L AC+ +++E+G + +L
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278
Query: 394 -PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDA 452
D+ L ++Y G L A S + + A ++ N + +
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIF-----SNMSQRDAVTYNTLINGL-----SQCG 328
Query: 453 HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL----QVHSEKLALAFAL 508
+ ++AM E+ +++ G PDS+ + S + L Q+H+ L FA
Sbjct: 329 YGEKAM------ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 382
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+ G+ +++ C D +A +
Sbjct: 383 NNKIEGALLNLYAK---CADIETALDY 406
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/568 (43%), Positives = 351/568 (61%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C +LK+L AR +H+ +L F +D + I++AY+KCG LD+A +F MP +++V+
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVS 371
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I G QN A LFS+M +KPN+FT S+VL AS Q+HA
Sbjct: 372 WTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTAS-----IPILLPQIHAQI 426
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y VG++LL Y++ ++A +F ++ K+ V+W+A+++ +++ + + A
Sbjct: 427 IKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGAT 486
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M +G +P F+ SS A AS T ++QG+ HA IK Q VG+ LV M
Sbjct: 487 NVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTM 546
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ GSI+ A VF R RD+VSWNSM++G AQHG K + F +M GI + TF
Sbjct: 547 YARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATF 606
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L V+ C+HAGL+ EGQ YF +++ H + P HY VDL RAG LD + I MP
Sbjct: 607 LAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMP 666
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
A VW LLGACR+HKNVELG AA+++ L+P DS ++LL+NIYA+AGR +
Sbjct: 667 FPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDE 726
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M VKKE CSW++ KN VH F+A D +HP I+ K + ++ ++KQ GY P+
Sbjct: 727 VRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPN 786
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S VL ++++E L +HSE+LALAF LI+TPP + + I KN+RVCGDCH K S
Sbjct: 787 TSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSL 846
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REII+RD +RFHHF G CSCGD+W
Sbjct: 847 IEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 190/367 (51%), Gaps = 8/367 (2%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R VHA + ++ + + N+++N Y+KCG ++EA+ +F +M +DMV+W L++G N
Sbjct: 221 RRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLN 280
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ A+ LF K +Q T S+V+K A RQ+H+ LK+G+ + V
Sbjct: 281 EHQLEALQLFHDSRASMAKLSQSTYSTVIKLC-ANLKQLALARQLHSCVLKHGFHSDGNV 339
Query: 132 GSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
++++D Y++ ++DDA+ +F + S+N VSW A+I G + ++ A FS M +
Sbjct: 340 MTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDN 399
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P F+YS+V TA L Q +HA +IK+ Q VG L+ Y+K G+ E+A
Sbjct: 400 VKPNEFTYSTVLTASIPI-LLPQ---IHAQIIKTNYQHAPSVGTALLASYSKLGNTEEAL 455
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHA 309
+F + +DVV+W++ML+ +Q G F KM G+ PN+ T + AC S
Sbjct: 456 SIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPT 515
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+D+G+ + A+ K+ + V + R G +D A + + E + W ++
Sbjct: 516 AGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVSWNSM 574
Query: 370 LGACRMH 376
+ H
Sbjct: 575 ISGYAQH 581
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 162/284 (57%), Gaps = 4/284 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ + +++ Y KCG +++ R +F+ MP +++VTWT+L++GY Q + + LF +
Sbjct: 132 RAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFR 191
Query: 84 MLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
M G+ PN FT +SVL A + GA D GR+VHA +K+G V+V +SL++MY++
Sbjct: 192 MRAEGVWPNPFTFTSVLSAVASQGAVD--LGRRVHAQSVKFGCRSTVFVCNSLINMYSKC 249
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+++A +F +E+++ VSWN L+AG +AL+ F + + + +YS+V
Sbjct: 250 GLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVI 309
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL-KRDV 261
A+ L + +H+ V+K G V ++D Y+K G ++DA +F + ++V
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNV 369
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
VSW +M+ GC Q+ F +M + + PN+ T+ VLTA
Sbjct: 370 VSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA 413
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 173/352 (49%), Gaps = 8/352 (2%)
Query: 46 ARKLFDEMPVKDMVTWTA----LISGYSQNDQPEN-AIILFSQMLRLGLKPNQFTLSSVL 100
AR+ D MP +D ++ I Y + + A+ F + R G + +S VL
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVL 106
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTALESKN 159
K G D G Q+H C+K G+D V VG++L+DMY + ++D +F + +N
Sbjct: 107 KVCGL-IPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V+W +L+ G+ + + F M EG P F+++SV +A+AS G+++ G+ VHA
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+K G + FV N+L++MY+K G +E+A+ VF ++ RD+VSWN+++ G +
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
++ F + +Q T+ V+ C++ L + + + KHG + +D
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMD 345
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
+ G LD A MP W A++G C + ++ L A R+ E
Sbjct: 346 AYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/571 (40%), Positives = 354/571 (61%), Gaps = 8/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L A ++H + + ++ + N +++ Y K G L EA +F M ++D+VTW
Sbjct: 178 CVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTW 237
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-RQVHAFC 120
++IS Q + A+ LF M+ G+ P+ TL S+ AS D+ G + VH +
Sbjct: 238 NSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSL--ASAVAQCGDELGAKSVHCYV 295
Query: 121 LKYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ G+D ++ G++++DMYA+ ++D A +F L ++ VSWN LI G+ + +A
Sbjct: 296 RRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEA 355
Query: 180 LRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+R +++M EG +P ++ SV A + G L+QG +HA IK+G L +V L+D
Sbjct: 356 IRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLID 415
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+YAK G + +A +F + +R WN+++ G HG G + F +M + I P+ VT
Sbjct: 416 LYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVT 475
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ +L ACSHAGL+D+G+ +F LM+ +G+ P HY VD+LGRAG LD A +FI+ M
Sbjct: 476 FVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSM 535
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI+P +AVWGALLGACR+H NVE+G A++ +FELDP + G ++L++N+YA G+ +
Sbjct: 536 PIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVD 595
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVA--NDDAHPQRAMIHKKWREISEKIKQIGY 475
R +++ ++K P S +E K +V +F + + HPQ I + ++ K+K GY
Sbjct: 596 AVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGY 655
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VPD S VL ++ E+E L HSE+LA+AF +I+TPPG+ +HI KN+RVCGDCHSA K+
Sbjct: 656 VPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKY 715
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ EREIIVRD NRFHHF+DG CSCGD+W
Sbjct: 716 ISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 205/389 (52%), Gaps = 12/389 (3%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ ++++AY + G + EA ++FDEMP +D+ W A++SG +N + +A+ L +M+
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ + TLSSVL D +H + +K+G ++V ++L+D+Y + +
Sbjct: 161 GEGVAGDAVTLSSVLPMC-VVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGML 219
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+A ++F + ++ V+WN++I+ + + + A+ F M+ G P + S+ +A+
Sbjct: 220 TEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAV 279
Query: 206 ASTGSLEQGKWVHAHVIKSG---GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
A G K VH +V + G G ++A GN +VDMYAK I+ A+KVF+ L RDVV
Sbjct: 280 AQCGDELGAKSVHCYVRRRGWDVGDIIA--GNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
SWN+++TG Q+GL +R + M + G+ P Q TF+ VL A S+ G L +G AL
Sbjct: 338 SWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL 397
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
K G+ + +DL + G L A+ MP T W A++ +H +
Sbjct: 398 SIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGP-WNAIIAGLGVHGH--- 453
Query: 382 GAYAAERIFELDPHDSGP-HILLANIYAS 409
GA A ++ + P H+ ++ A+
Sbjct: 454 GAKALSLFSQMQQEEIKPDHVTFVSLLAA 482
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 5/223 (2%)
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDD 147
L+P+ FT +++A+ A+ Q+HA L+ G NV+ SL+ Y RF ++ +
Sbjct: 65 LRPDSFTFPPLVRAAPGPAS----AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAE 120
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A+ +F + ++ +WNA+++G R + A+ M+ EG + SSV
Sbjct: 121 AYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVV 180
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G +H + +K G FV N L+D+Y K G + +A VF + RD+V+WNS+
Sbjct: 181 LGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSI 240
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
++ Q G A V F M+ +G+ P+ +T + + +A + G
Sbjct: 241 ISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG 283
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 357/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ +H+ I+ + F+ + + + +++ YAK G LD A + KD+V+W
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+GY+Q + + A+ F QML G++ ++ L++ + A AG K G+Q+HA
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQAC 618
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ ++ ++L+ +Y+R ++++++ F E+ + ++WNAL++G + E+ALR
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M REG + +F++ S A + T +++QGK VHA + K+G V N L+ MYA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSI DAEK F + ++ VSWN+++ ++HG G + F++M+ + + PN VT +
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+D+G YF M ++G+ P+ HYV VD+L RAGLL RA +FI+EMPI+
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VW LL AC +HKN+E+G +AA + EL+P DS ++LL+N+YA + + + R
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MKE GVKKEP SW+E KN++H F D HP IH+ +++++++ +IGYV D
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 978
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L+ ++++ + +HSEKLA++F L+S P I++ KN+RVC DCH+ KF SKV
Sbjct: 979 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 1038
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD RFHHF G CSC DYW
Sbjct: 1039 NREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 190/393 (48%), Gaps = 14/393 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+ +H +L F +D + N +++ Y G L A +F M +D VT+
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+G SQ E A+ LF +M GL+P+ TL+S++ A A T + G+Q+HA+
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTT 416
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ N + +LL++YA+ ++ A F E +N V WN ++ + + + R
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M E P ++Y S+ G LE G+ +H+ +IK+ QL A+V + L+DMYA
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A + R +DVVSW +M+ G Q+ + F +ML GI ++V
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
++AC+ L EGQ A G + V L R G ++ + + E
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQ 651
Query: 362 TAA----VWGALLGACRMHKNVELGAYAAERIF 390
T A W AL+ + N E A R+F
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNE----EALRVF 680
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 214/447 (47%), Gaps = 41/447 (9%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E R +H+ IL ++ + + + Y G L A K+FDEMP + + TW +I
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ + LF +M+ + PN+ T S VL+A G+ Q+HA L G
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V + L+D+Y+R +D A +F L K+ SW A+I+G ++ +A+R F +M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G PT +++SSV +A SLE G+ +H V+K G +V N LV +Y G++
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
AE +F+ + +RD V++N+++ G +Q G G+ + F++M +G+ P+ T ++ ACS
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 308 HAGLLDEGQGYFALMKKHG----------------------------VEPEEAHYVTFVD 339
G L GQ A K G +E E + V +
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 340 LLGRAGLLD---RALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAERI---- 389
+L GLLD + + R+M IE P + ++L C ++ELG +I
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 390 FELDPHDSGPHILLANIYASAGRLNDA 416
F+L+ + +L ++YA G+L+ A
Sbjct: 521 FQLNAYVCS---VLIDMYAKLGKLDTA 544
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 150/387 (38%), Gaps = 60/387 (15%)
Query: 190 GFEPTHFSYSSVFTA-LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P H + + L + GSL++G+ +H+ ++K G + L D Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A KVF+ + +R + +WN M+ A L F +M+ + PN+ TF VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 309 AGL-LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD------------------- 348
+ D + A + G+ +DL R G +D
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 349 ------------RALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
A++ +M I PT + ++L AC+ +++E+G + +L
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 394 -PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDA 452
D+ L ++Y G L A S + + A ++ N + +
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIF-----SNMSQRDAVTYNTLINGL-----SQCG 368
Query: 453 HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL----QVHSEKLALAFAL 508
+ ++AM E+ +++ G PDS+ + S + L Q+H+ L FA
Sbjct: 369 YGEKAM------ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+ G+ +++ C D +A +
Sbjct: 423 NNKIEGALLNLYAK---CADIETALDY 446
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/571 (40%), Positives = 358/571 (62%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H L + VH HIL + D + ++ Y+ G +D ARK+FD+ + + W
Sbjct: 87 CGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAG-ATDDKF--GRQVHA 118
AL + E + L+ +M R+G++ ++FT + VLKA A T D G+++HA
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHA 206
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ GY+ +VY+ ++L+DMYARF +D A ++F + +N VSW+A+IA +A+ + +
Sbjct: 207 HLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
ALRTF EM+ E + P + SV A AS +LEQG+ +H ++++ G + V + L
Sbjct: 267 ALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISAL 326
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MY + G ++ ++VF+R+ RDVVSWNS+++ HG G+ ++ FE+ML NG +P
Sbjct: 327 VTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTP 386
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VTF+ VL ACSH GL++EG+ F M + HG++P+ HY VDLLGRA LD A K ++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+M EP VWG+LLG+CR+H NVEL A+ R+F L+P ++G ++LLA+IYA A ++
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R +K+++ G++K P W+E + ++ FV+ D+ +P IH +++E +K+ GY
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+P + VL + +E+E + HSEKLALAF LI+T G I I KN+R+C DCH KF
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK +E+EI+VRD NRFH F++G CSCGDYW
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 10/245 (4%)
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
++S N LI ++ + ++ALR S+ P+ +Y + SL G VH
Sbjct: 46 KISNNQLIQSLCKEGKLKQALRVLSQ----ESSPSQQTYELLILCCGHRSSLSDGLRVHR 101
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
H++ +G F+ L+ MY+ GS++ A KVF++ KR + WN++ G G+
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTAC----SHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ + KM R G+ ++ T+ VL AC A L +G+ A + + G
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMT 221
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
T VD+ R G +D A MP+ + W A++ AC A R +
Sbjct: 222 TLVDMYARFGCVDYASYVFNGMPVRNVVS-WSAMI-ACYAKNGKAFEALRTFREMMTETK 279
Query: 396 DSGPH 400
DS P+
Sbjct: 280 DSSPN 284
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 356/566 (62%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTH ++ +H+ + + F++D+ + +++ Y+K G LD+A+++ D + KD+V+W
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSW 414
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q++ + A+ F +M G+ P+ L+S + A AG G Q+HA
Sbjct: 415 TSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISAC-AGIKAVHQGSQIHARVY 473
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY +V + + L+ +YAR +A+ F A+E K ++WN LI+G A+ E+AL+
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALK 533
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + G + F++ S +A A+ ++QGK +HA VIK+G + N L+ +Y
Sbjct: 534 VFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYG 593
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GSIEDA+ F + KR+ VSWN+++T C+QHG G + F++M + G+ P+ VTF+
Sbjct: 594 KCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVG 653
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSH GL++EG YF M +HG+ P HY VD+LGRAG LDRA +F+ EMPI
Sbjct: 654 VLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIP 713
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+ VW LL AC++HKN+E+G +AA+ + EL+PHDS ++LL+N YA G+ + R
Sbjct: 714 ADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIR 773
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ GV+KEP SW+E KN VH F D HP I+ +++++ +IGY ++
Sbjct: 774 KIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENY 833
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
H+ +++ ++ VHSEKLA+AF L+S P + + KN+RVC DCH+ KF S V+
Sbjct: 834 HLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVM 893
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD RFHHF +G CSCGDYW
Sbjct: 894 GREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 197/364 (54%), Gaps = 2/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + N +++ YAK G + AR++F+E+ V+D V+W A++SGY+QN
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ L+ +M R G+ P + LSS+L A + GR +H K G+ +VG+
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSAC-TKTELFQLGRLIHVQVYKQGFFSETFVGN 182
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ +Y R A +F + + V++N LI+GHA+ G++AL F EM G P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ A ++ G L +GK +H++++K+G L + +L+D+Y KSG IE+A ++F
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + +VV WN ML Q + F +ML G+ PN+ T+ C+L C+H G +
Sbjct: 303 DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L K+G + + +D+ + G LD+A + I +M E W +++
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQR-ILDMIEEKDVVSWTSMIAGY 421
Query: 374 RMHK 377
H+
Sbjct: 422 VQHE 425
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 180/350 (51%), Gaps = 1/350 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + R++H + F ++ + N +++ Y +C A ++F +M D VT+
Sbjct: 153 CTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTF 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISG++Q + A+ +F +M GL P+ T++S+L A A D + G+Q+H++ L
Sbjct: 213 NTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSA-VGDLRKGKQLHSYLL 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SLLD+Y + +++A +F + + N V WN ++ + + + K+
Sbjct: 272 KAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML G P F+Y + TG + G+ +H+ IK+G Q +V L+DMY+
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A+++ + + ++DVVSW SM+ G QH K + F++M GI P+ +
Sbjct: 392 KYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLAS 451
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
++AC+ + +G A + G + + + V L R G+ A
Sbjct: 452 AISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAF 501
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 191/414 (46%), Gaps = 41/414 (9%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
M + ++ ++G+ D PE + LF+ R + + L+A
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
++HA + G +G+ L+D+YA+ + A +F L ++ VSW A+++G+A+
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
GE+A+R + EM R G PT + SS+ +A T + G+ +H V K G FV
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
GN L+ +Y + S A++VF +L D V++N++++G AQ G G + F++M +G+
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGL 240
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+P+ VT +L ACS G L +G+ + + K G+ + + +DL ++G ++ AL+
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300
Query: 353 --------------------------------FIREMP--IEPTAAVWGALLGACRMHKN 378
F R + + P + +L C
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360
Query: 379 VELG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ LG + + F+ D + SG +L ++Y+ G L+ A R M++E V
Sbjct: 361 IGLGEQIHSLTIKNGFQSDMYVSG---VLIDMYSKYGWLDKAQRILDMIEEKDV 411
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/542 (41%), Positives = 343/542 (63%), Gaps = 2/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ M NT++ +C ++EAR+LF+ M +D +TWT +++G++QN A+ F +M
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMR 264
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ +Q+T S+L A GA + ++ G+Q+HA+ ++ YD NV+VGS+L+DMY++ +
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQ-GKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSI 323
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A F + KN +SW ALI G+ + E+A+R FSEM R+G +P F+ SV ++
Sbjct: 324 KPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSC 383
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A+ SLE+G H + SG V N LV +Y K GSIEDA ++F+ +L D VSW
Sbjct: 384 ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWT 443
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
+++TG AQ G K T+ FEKML + P+ VTF+ VL+ACS AG +++G YF M+K
Sbjct: 444 ALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKD 503
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
HG+ P + HY +DL R+G L A +FI++MP+ P A WG LL ACR+ ++E+G +
Sbjct: 504 HGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQW 563
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AAE + E+DP + ++LL +++A+ G N A+ R+ M++ VKKEP CSW++ KN VH
Sbjct: 564 AAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVH 623
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
+F A+D +HP I++K ++ K+ + GY PD S VL ++ + HSEKLA+
Sbjct: 624 IFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAI 683
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF L+ P I I KN+RVC DCH+A K SK+ R+I+VRD RFH F +G CSCGD
Sbjct: 684 AFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGD 743
Query: 565 YW 566
+W
Sbjct: 744 FW 745
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 230/489 (47%), Gaps = 62/489 (12%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-- 88
N +L+ A LD+ LF M +D V++ A+I+G+S A+ L+ +LR G
Sbjct: 76 NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR------- 141
++P++ T+S+++ A+ A D GRQ H L+ G+ N +VGS L+ MYA+
Sbjct: 136 VRPSRITMSAMVMAASA-LGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDA 194
Query: 142 ---FDQMD---------------------DAWFLFTALESKNEVSWNALIAGHARKSEGE 177
FD+MD +A LF + ++ ++W ++ G +
Sbjct: 195 KRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLES 254
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M +G +++ S+ TA + +LEQGK +HA++I++ FVG+ LV
Sbjct: 255 QALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALV 314
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY+K SI+ AE F R+ ++++SW +++ G Q+G + VR F +M R+GI P+
Sbjct: 315 DMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDF 374
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKF 353
T V+++C++ L+EG + L G+ HY+T V L G+ G ++ A +
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGL----MHYITVSNALVTLYGKCGSIEDAHRL 430
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
EM + W AL+ + E++ D G + G L
Sbjct: 431 FDEMLFHDQVS-WTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFI--------GVL 481
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK---KWREISEKI 470
+ +RA + E CS+ + H V DD + ++ + +E E I
Sbjct: 482 SACSRAGFV--------EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFI 533
Query: 471 KQIGYVPDS 479
KQ+ PD+
Sbjct: 534 KQMPMHPDA 542
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 154/276 (55%), Gaps = 3/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L++ + +HA+I+ + + +++ + + +++ Y+KC + A F M K++++W
Sbjct: 282 CGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISW 341
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALI GY QN E A+ +FS+M R G+ P+ FTL SV+ + A+ ++ G Q H L
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEE-GAQFHCLAL 400
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++DA LF + ++VSW AL+ G+A+ ++ +
Sbjct: 401 VSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETID 460
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML + +P ++ V +A + G +E+G + H+ G + ++D+Y
Sbjct: 461 LFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLY 520
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++SG +++AE+ ++ + D + W ++L+ C G
Sbjct: 521 SRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/593 (41%), Positives = 362/593 (61%), Gaps = 32/593 (5%)
Query: 5 LKKLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCL-------------------- 43
L+ LK +HA + + + + + NT++N Y KCG +
Sbjct: 105 LQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRV 164
Query: 44 DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS 103
D+++ LF+ +DMV+W +IS +SQ+D+ A+ F M+ G++ + T++SVL A
Sbjct: 165 DDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 224
Query: 104 GAGATDDKFGRQVHAFCLKYG-YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
D G+++HA+ L+ N +VGS+L+DMY Q++ +F + +
Sbjct: 225 SHLERLD-VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIEL 283
Query: 163 WNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALA-STGSLEQGKWVHAH 220
WNA+I+G+AR EKAL F EM++ G P + +SV A S ++ +GK +HA+
Sbjct: 284 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAY 343
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
I++ VG+ LVDMYAK G + + +VFN + ++V++WN ++ C HG G+
Sbjct: 344 AIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEA 403
Query: 281 VRWFEKML----RNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHY 334
+ F+ M+ R G A PN+VTF+ V ACSH+GL+ EG F MK HGVEP HY
Sbjct: 404 LELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHY 463
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
VDLLGRAG L+ A + + MP E W +LLGACR+H+NVELG AA+ + L+
Sbjct: 464 ACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLE 523
Query: 394 PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAH 453
P+ + ++LL+NIY+SAG N A RK M++ GVKKEP CSW+E ++ VH F+A D +H
Sbjct: 524 PNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSH 583
Query: 454 PQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPP 513
PQ +H +SEK+++ GYVPD+S VL D+ E+E L HSEKLA+AF +++TPP
Sbjct: 584 PQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPP 643
Query: 514 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
G+TI + KN+RVC DCH+A KF SK++EREIIVRD RFHHF++G CSCGDYW
Sbjct: 644 GTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 54 PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 113
P + +W + ++++ AI + +M G +P+ F +VLKA +G D K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAV-SGLQDLKTG 111
Query: 114 RQVHAFCLKYGYDWN---------------------VYVGSSLLDMYARFDQMDDAWFLF 152
Q+HA +K+GY + + ++L+ MYA+ ++DD+ LF
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ ++ VSWN +I+ ++ +AL F M+ EG E + +SV A + L+
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231
Query: 213 QGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
GK +HA+V+++ + +FVG+ LVDMY +E +VF+ +L R + WN+M++G
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291
Query: 272 AQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHA-GLLDEGQGYFALMKKHGVEP 329
A++GL + + F +M++ G+ PN T V+ AC H+ + +G+ A ++ +
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ VD+ + G L+ + + EMP W L+ AC MH
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMH 397
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 187/360 (51%), Gaps = 34/360 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNT-----ILNAYAKCGCLDEARKLFDEMPVK 56
C+HL++L + +HA++L +N+ ++N+ +++ Y C ++ R++FD + +
Sbjct: 224 CSHLERLDVGKEIHAYVL----RNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQ 115
+ W A+ISGY++N E A+ILF +M+++ GL PN T++SV+ A G++
Sbjct: 280 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKE 339
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+HA+ ++ ++ VGS+L+DMYA+ ++ + +F + +KN ++WN LI +
Sbjct: 340 IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGK 399
Query: 176 GEKALRTFSEMLREG-----FEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSG 225
GE+AL F M+ E +P ++ +VF A + +G + +G + H H ++
Sbjct: 400 GEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPT 459
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR--DVVSWNSMLTGCAQHGLGKATVRW 283
A V VD+ ++G +E+A ++ N + V +W+S+L C H V
Sbjct: 460 SDHYACV----VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH----QNVEL 511
Query: 284 FEKMLRN--GIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEA-HYVTFVD 339
E +N + PN + +L+ S AGL ++ M++ GV+ E ++ F D
Sbjct: 512 GEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 571
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/561 (40%), Positives = 353/561 (62%), Gaps = 3/561 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + + +HA+ + + F +++ +Q +L+ YAKC L ARK+F+ + K+ V W+A+I G
Sbjct: 226 LHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGG 285
Query: 68 YSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Y +D +A+ L+ ML + GL P TL+++L+A A TD K G+++H +K G D
Sbjct: 286 YVLHDSISDALALYDDMLCIYGLNPTPATLATMLRAC-AQLTDLKRGKKLHCHMIKSGMD 344
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ VG+SL+ MYA+ MD+A + +K+ VS++A+I+G + EKAL F +M
Sbjct: 345 LDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQM 404
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G P + ++ A + +L+ G H + + G + N ++DMY+K G I
Sbjct: 405 QSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKI 464
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ ++F+R+ RD++SWN+M+ G HGL + F+++ G+ P+ VT + VL+AC
Sbjct: 465 TISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSAC 524
Query: 307 SHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+ EG+ +F+ M ++ ++P AHY+ VDLL RAG LD A FI+ MP P +
Sbjct: 525 SHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRI 584
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALL ACR HKN+E+G +++I L P +G +L++NIY+S GR +DAA R + +
Sbjct: 585 WGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRH 644
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G KK P CSWVE +H+F+ +HPQ A I+KK +E+ ++K++GY DSS VL
Sbjct: 645 HGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHD 704
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E L HSEK+A+AF +++T P S I + KN+R+C DCHSA KF + + EREI
Sbjct: 705 VEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREIT 764
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD +RFHHF+DG C+C D+W
Sbjct: 765 VRDASRFHHFKDGICNCQDFW 785
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 226/457 (49%), Gaps = 46/457 (10%)
Query: 2 CTHLKKLKEARIVH--AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKD 57
C+ L+ L+ R++H AHILG + D+ + +L+ YAKCG L +A+ LF+ + +D
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSM--DLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+V W A+I+ +S + I +QM + G+ PN TL S+L G + G+ +H
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ-GKAIH 233
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A+ ++ + NV + ++LLDMYA+ + A +F + KN+V W+A+I G+
Sbjct: 234 AYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSIS 293
Query: 178 KALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL + +ML G PT + +++ A A L++GK +H H+IKSG L VGN+L
Sbjct: 294 DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSL 353
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MYAK G +++A + ++ +D VS++++++GC Q+G + + F +M +GIAP
Sbjct: 354 ISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYL 413
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG-------LLDR 349
T + +L ACSH L G G + + +D+ + G + DR
Sbjct: 414 ETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDR 473
Query: 350 ------------------------ALKFIREMP---IEPTAAVWGALLGACRMHKNVELG 382
AL +E+ ++P A+L AC V G
Sbjct: 474 MQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEG 533
Query: 383 AY---AAERIFELDPHDSGPHILLANIYASAGRLNDA 416
Y + + F + P +I + ++ A AG L++A
Sbjct: 534 KYWFSSMSQNFNIKPR-MAHYICMVDLLARAGNLDEA 569
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 168/331 (50%), Gaps = 5/331 (1%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
AR +FD++P +V W +I Y+ + + +I L+ ML+LG+ P FT +LKA +
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKAC-S 118
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSW 163
+ GR +H G ++YV ++LL MYA+ + A LF ++ + ++ V+W
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
NA+IA + + + + + ++M + G P + S+ + +L QGK +HA+ I+
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
+ + L+DMYAK + A K+FN + K++ V W++M+ G H +
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298
Query: 284 FEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
++ ML G+ P T +L AC+ L G+ M K G++ + + + +
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ G++D A+ F+ EM + T + + A++ C
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVS-YSAIISGC 388
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 149/277 (53%), Gaps = 7/277 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK + +H H++ S D + N++++ YAKCG +D A DEM KD V++
Sbjct: 322 CAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSY 381
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+ISG QN E A+++F QM G+ P T+ ++L A A + G H + +
Sbjct: 382 SAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAA-LQHGTCCHGYTV 440
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + + ++++DMY++ ++ + +F +++++ +SWN +I G+ +AL
Sbjct: 441 VRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALS 500
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVGNTLVD 238
F E+ G +P + +V +A + +G + +GK+ + + ++ ++ ++ +VD
Sbjct: 501 LFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI--CMVD 558
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+ A++G++++A R+ +V W ++L C H
Sbjct: 559 LLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTH 595
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 13/294 (4%)
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+++ A +F + + V WN +I +A ++++ + ML+ G PT+F++ +
Sbjct: 55 NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRD 260
A +S +L+ G+ +H H G + +V L+ MYAK G + A+ +FN + RD
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+V+WN+M+ + H L T+ +M + G+ PN T + +L A L +G+ A
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHA 234
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
++ +D+ + LL A K + + W A++G +H ++
Sbjct: 235 YYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN-KKNDVCWSAMIGGYVLHDSIS 293
Query: 381 --LGAYAAER-IFELDPHDSGPHILLANIYASAGRLNDAARARKM---MKESGV 428
L Y I+ L+P + LA + + +L D R +K+ M +SG+
Sbjct: 294 DALALYDDMLCIYGLNPTPAT----LATMLRACAQLTDLKRGKKLHCHMIKSGM 343
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+HL L+ H + + F ND ++ N I++ Y+KCG + +R++FD M +D+++W
Sbjct: 423 CSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISW 482
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAG-ATDDKF------- 112
+I GY + A+ LF ++ LGLKP+ TL +VL A S +G T+ K+
Sbjct: 483 NTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQ 542
Query: 113 -----GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNAL 166
R H C ++D+ AR +D+A+ + N W AL
Sbjct: 543 NFNIKPRMAHYIC--------------MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGAL 588
Query: 167 IAG---HARKSEGEKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
+A H GE+ + + EG F YSSV G+W A
Sbjct: 589 LAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSV------------GRWDDAA 636
Query: 221 VIKS 224
I+S
Sbjct: 637 YIRS 640
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/554 (40%), Positives = 354/554 (63%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + D + +++ Y+K G ++EA LF D+ +W A++ GY +
Sbjct: 1059 IHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGD 1118
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ L+ M G + +Q TL + KA+G G K G+Q+HA +K G++ +++V S
Sbjct: 1119 FPKALRLYILMQESGERSDQITLVNAAKAAG-GLVGLKQGKQIHAVVVKRGFNLDLFVTS 1177
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LDMY + +M+ A +F+ + S ++V+W +I+G + E AL T+ +M +P
Sbjct: 1178 GVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQP 1237
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++++++ A + +LEQG+ +HA+++K FV +LVDMYAK G+IEDA +F
Sbjct: 1238 DEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1297
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
R R + SWN+M+ G AQHG K +++F+ M G+ P++VTF+ VL+ACSH+GL+
Sbjct: 1298 KRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVS 1357
Query: 314 EG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + ++++ K +G+EPE HY VD L RAG ++ A K I MP E +A+++ LL A
Sbjct: 1358 EAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNA 1417
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+ + E G AE++ L+P DS ++LL+N+YA+A + + A AR MM++ VKK+P
Sbjct: 1418 CRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDP 1477
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWV+ KN VH+FVA D +H + +I+ K I ++I++ GYVPD+ L +++++E
Sbjct: 1478 GFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKE 1537
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+A+ L+ TPP +T+ + KN+RVCGDCHSA K+ SKV +REI++RD NRF
Sbjct: 1538 CSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRF 1597
Query: 553 HHFRDGFCSCGDYW 566
HHFR+G CSCGDYW
Sbjct: 1598 HHFRNGICSCGDYW 1611
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 196/376 (52%), Gaps = 1/376 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ + +H ++ S +++ N ++N Y K G + AR +F +M D+++W +
Sbjct: 948 LNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTM 1007
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISG + + E ++ +F +LR L P+QFT++SVL+A + Q+HA +K G
Sbjct: 1008 ISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAG 1067
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +V ++L+D+Y++ +M++A FLF + + SWNA++ G+ + KALR +
Sbjct: 1068 VVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYI 1127
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G + + A L+QGK +HA V+K G L FV + ++DMY K G
Sbjct: 1128 LMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCG 1187
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+E A +VF+ + D V+W +M++GC ++G + + + +M + + P++ TF ++
Sbjct: 1188 EMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVK 1247
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS L++G+ A + K + + VD+ + G ++ A + A+
Sbjct: 1248 ACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIAS 1307
Query: 365 VWGALLGACRMHKNVE 380
W A++ H N +
Sbjct: 1308 -WNAMIVGLAQHGNAK 1322
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 189/409 (46%), Gaps = 48/409 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + + + D+ + ++N YAK G + EAR LFD M V+D+V W ++ Y
Sbjct: 782 LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCL 841
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A++LFS+ R G +P+ TL ++ + + +Q A+ K
Sbjct: 842 EYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILEL-KQFKAYATK----------- 889
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L MY DD + + + WN ++ ++ E +A+ F +M+
Sbjct: 890 --LFMY------DD--------DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++ + T +A LE GK +H V++SG V VGN L++MY K+GS+ A VF
Sbjct: 934 DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++ + D++SWN+M++GC GL + +V F +LR+ + P+Q T VL ACS
Sbjct: 994 GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL---- 1049
Query: 314 EGQGYFALM-----KKHGVEPEEAHYVTFVDLLGRAGLLDRA-LKFIREMPIEPTAAVWG 367
EG Y A K GV + +D+ + G ++ A F+ + + A W
Sbjct: 1050 EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFD--LASWN 1107
Query: 368 ALLGACRMHKNVELGAYA-AERIFEL--DPHDSGPHILLANIYASAGRL 413
A+ MH + G + A R++ L + + I L N +AG L
Sbjct: 1108 AI-----MHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGL 1151
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 32/364 (8%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMVTWTALISGYSQN- 71
HA IL S D + N ++ YAKCG L ARKLFD P +D+VTW A++S + +
Sbjct: 679 HARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHA 738
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
D+ + LF + R + + TL+ V K A+ +H + +K G W+V+V
Sbjct: 739 DKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA-SESLHGYAVKIGLQWDVFV 797
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+L+++YA+F + +A LF + ++ V WN ++ + +A+ FSE R GF
Sbjct: 798 AGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGF 857
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + ++ + ++ + K A+ K + MY GS
Sbjct: 858 RPDDVTLRTLSRVVKCKKNILELKQFKAYATK-------------LFMYDDDGS------ 898
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
DV+ WN L+ Q G V F M+ + +A + +TF+ +LT +
Sbjct: 899 --------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNC 950
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L+ G+ ++ + G++ + +++ +AG + RA +M E W ++
Sbjct: 951 LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLISWNTMIS 1009
Query: 372 ACRM 375
C +
Sbjct: 1010 GCTL 1013
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 11/346 (3%)
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
D++ W +S + Q + A+ F M+ + + T +L AG + G+Q+
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV-AGLNCLELGKQI 957
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H ++ G D V VG+ L++MY + + A +F + + +SWN +I+G
Sbjct: 958 HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLE 1017
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW----VHAHVIKSGGQLVAFV 232
E ++ F +LR+ P F+ +SV A + SLE G + +HA +K+G L +FV
Sbjct: 1018 ECSVGMFVHLLRDSLLPDQFTVASVLRACS---SLEGGYYLATQIHACAMKAGVVLDSFV 1074
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
L+D+Y+K G +E+AE +F D+ SWN+++ G G +R + M +G
Sbjct: 1075 STALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGE 1134
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+Q+T + A L +G+ A++ K G + +D+ + G ++ A +
Sbjct: 1135 RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARR 1194
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHD 396
E+P P W ++ C + E L Y R+ ++ P +
Sbjct: 1195 VFSEIP-SPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDE 1239
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALES 157
S+L+ + A A+D G++ HA L G+ + +V ++L+ MYA+ + A LF
Sbjct: 661 SILRQAIA-ASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719
Query: 158 KNE--VSWNALI---AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
N V+WNA++ A HA KS F + R T + + VF + S
Sbjct: 720 TNRDLVTWNAILSALAAHADKSH--DGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPS 777
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+ +H + +K G Q FV LV++YAK G I +A +F+ + RDVV WN M+
Sbjct: 778 ASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYV 837
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTF 299
L + F + R G P+ VT
Sbjct: 838 DTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L++ R +HA+I+ D + ++++ YAKCG +++AR LF + + +W
Sbjct: 1249 CSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASW 1308
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G +Q+ + A+ F M G+ P++ T VL A + ++
Sbjct: 1309 NAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQK 1368
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
YG + + S L+D +R ++++A + +++
Sbjct: 1369 NYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 367/626 (58%), Gaps = 68/626 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM--------- 58
L+ + VH+ I+ + ++++ N++LN YAKCG A+ +FD M VKD+
Sbjct: 162 LETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIAL 221
Query: 59 ----------------------VTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFT 95
VTW ++ISGY+Q A+ +FS+MLR L P++FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFT 281
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------------- 141
L+SVL A A G Q+H+ + G+D + V ++L+ MY+R
Sbjct: 282 LASVLSAC-ANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 142 -------------------FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
M++A +F +L+ ++ V+W A+I G+ + +A+
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F M+ E P ++ +++ + +S SL GK +H +KSG V N L+ MYAK
Sbjct: 401 FRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+GSI A + F+ + +RD VSW SM+ AQHG + + FE ML G+ P+ +T++
Sbjct: 461 AGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
V +AC+HAGL+++G+ YF +MK + P +HY VDL GRAGLL A +FI +MPIE
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P WG+LL ACR++KN++LG AAER+ L+P +SG + LAN+Y++ G+ +AA+ R
Sbjct: 581 PDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK+ VKKE SW+E K+ VH F D HPQ+ I+ ++I ++IK++GYVPD++
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTA 700
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++ +E L+ HSEKLA+AF LISTP +T+ I KN+RVC DCH+A KF SK+V
Sbjct: 701 SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDT RFHHF+DGFCSC DYW
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 216/465 (46%), Gaps = 75/465 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+AYAK G +D + + FD +P +D V+WT +I GY Q AI + +M+R G++
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P+QFTL++VL AS A + G++VH+F +K G NV V +SLL+MYA+
Sbjct: 144 PSQFTLTNVL-ASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 142 -FD---------------------QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
FD QMD A F + ++ V+WN++I+G+ ++ +A
Sbjct: 203 VFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA 262
Query: 180 LRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L FS+MLR+ P F+ +SV +A A+ L G+ +H+H++ +G + V N L+
Sbjct: 263 LDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALIS 322
Query: 239 MYAKSGSIE---------------------------------DAEKVFNRLLKRDVVSWN 265
MY++ G +E +A+ +F+ L RDVV+W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWT 382
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G QHGL + F M+ PN T +L+ S L G+ K
Sbjct: 383 AMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS 442
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGA 383
G + + + +AG + A + + E W +++ A H + E L
Sbjct: 443 GEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 384 YAAERIFELDPHDSGPHILLANIYAS---AGRLNDAARARKMMKE 425
+ + L P HI ++++ AG +N + MMK+
Sbjct: 503 FETMLMEGLRP----DHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 39/307 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKL------------ 49
C +L+KL +H+HI+ + F + N +++ Y++CG ++ AR+L
Sbjct: 289 CANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 50 ---------------------FDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
FD + +D+V WTA+I GY Q+ AI LF M+
Sbjct: 349 GFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEE 408
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL+++L + + A+ G+Q+H +K G ++V V ++L+ MYA+ + A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLGH-GKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSA 467
Query: 149 WFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
F + ++ VSW ++I A+ E+AL F ML EG P H +Y VF+A
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
G + QG+ + ++K +++ + + +VD++ ++G +++A++ ++ ++ DVV+W
Sbjct: 528 AGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 265 NSMLTGC 271
S+L+ C
Sbjct: 587 GSLLSAC 593
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 37/268 (13%)
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L+ + WN ++L YA+ MD + F L ++ VSW +I G+ + KA+
Sbjct: 77 LRTAFSWN-----TVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R EM+REG EP+ F+ ++V ++A+T LE GK VH+ ++K G + V N+L++MY
Sbjct: 132 RIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 241 AKSGSIEDAEKVFNRLL-------------------------------KRDVVSWNSMLT 269
AK G A+ VF+R++ +RD+V+WNSM++
Sbjct: 192 AKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 270 GCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G Q G + F KMLR+ ++P++ T VL+AC++ L G+ + + G +
Sbjct: 252 GYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFD 311
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+ + R G ++ A + I +
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQ 339
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
AF NT++ YAK G ++ + + F+RL +RD VSW +M+ G G +R +M+R
Sbjct: 80 AFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMR 139
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
GI P+Q T VL + + L+ G+ + + K G+ + + +++ + G
Sbjct: 140 EGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
A M ++ ++ W A++ ++L E++ E D
Sbjct: 200 AKVVFDRMVVKDISS-WNAMIALHMQVGQMDLAMAQFEQMAERD 242
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/566 (38%), Positives = 347/566 (61%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ + +H + +++ + N + AY +CG L + ++FD M K + +W
Sbjct: 317 CLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSW 376
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL+ GY+QN P A+ L+ QM GL P+ FT+ S+L A + +G ++H F L
Sbjct: 377 NALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC-SRMKSLHYGEEIHGFAL 435
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + ++G SLL +Y + A LF +E ++ VSWN +IAG+++ ++A+
Sbjct: 436 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 495
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML +G +P + V A + +L GK +H +K+ FV ++++DMYA
Sbjct: 496 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYA 555
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I ++++F+RL ++DV SWN ++ G HG GK + FEKMLR G+ P+ TF
Sbjct: 556 KGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTG 615
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSHAGL+++G YF ++ H +EP+ HY VD+LGRAG +D AL+ I EMP +
Sbjct: 616 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 675
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + +W +LL +CR+H N+ LG A ++ EL+P ++L++N++A +G+ +D R R
Sbjct: 676 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVR 735
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK+ G++K+ CSW+E VH F+ D+ P+ + + WR + KI IGY PD+
Sbjct: 736 GRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTG 795
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++++ L+ HSEKLA++F L++T G + + KN+R+CGDCH+A KF SKVV
Sbjct: 796 SVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVV 855
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+I+VRD RFHHFRDG CSCGDYW
Sbjct: 856 NRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 189/375 (50%), Gaps = 8/375 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C K ++ R +H + S F ND + I+ Y+ CG ++R +FD++ K++
Sbjct: 8 CGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQ 67
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W A++S Y++N+ E+A+ +FS+++ + KP+ FTL V+KA AG D G+ +H
Sbjct: 68 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC-AGLLDLGLGQIIHGM 126
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K +V+VG++L+ MY + +++A +F + +N VSWN++I G + +++
Sbjct: 127 ATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQES 186
Query: 180 LRTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
F EML E F P + +V A +E+G VH +K G V N+L+
Sbjct: 187 FNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLI 246
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPN 295
DMY+K + +A+ +F++ K+++VSWNSM+ G A+ T +KM + +
Sbjct: 247 DMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKAD 306
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+ T L VL C L + +HG++ E F+ R G L + +
Sbjct: 307 EFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFD 366
Query: 356 EMPIEPTAAVWGALL 370
M + T + W ALL
Sbjct: 367 LMDTK-TVSSWNALL 380
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 229/518 (44%), Gaps = 60/518 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L +I+H +D+ + N ++ Y KCG ++EA K+F+ MP +++V+W
Sbjct: 111 CAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSW 170
Query: 62 TALISGYSQNDQPENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++I G+S+N + + F +ML P+ TL +VL AG D + G VH
Sbjct: 171 NSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVC-AGEEDIEKGMAVHGL 229
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G + + V +SL+DMY++ + +A LF + KN VSWN++I G+AR+ + +
Sbjct: 230 AVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRT 289
Query: 180 LRTFSEMLREG--FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+M E + F+ +V L+ K +H + + G Q V N +
Sbjct: 290 FYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFI 349
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
Y + G++ +E+VF+ + + V SWN++L G AQ+ + + + +M +G+ P+
Sbjct: 350 AAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWF 409
Query: 298 TFLCVLTACSHAGLLDEGQGY--FALMKKHGVEP---------------EEAHYVTFVDL 340
T +L ACS L G+ FAL V+P A V F +
Sbjct: 410 TIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM 469
Query: 341 LGRA--------------GLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGA 383
R+ GL D A+ R+M I+P + GAC + LG
Sbjct: 470 EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGK 529
Query: 384 YAAERIFELDPH---DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
F L H D + ++YA G + + R ++E V SW
Sbjct: 530 EL--HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA-----SW---- 578
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
++ +A H + K+ E+ EK+ ++G PD
Sbjct: 579 ---NVIIAGYGIHGR----GKEALELFEKMLRLGLKPD 609
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 6/281 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV-GSSLLDMYARFDQMDDAWFLFTA 154
+ +L+A G D + GR++H N +V + ++ MY+ D+ +F
Sbjct: 1 MGVLLQACGQ-RKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDK 59
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQ 213
L KN WNA+++ + R E A+ FSE++ +P +F+ V A A L
Sbjct: 60 LRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL 119
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G+ +H K FVGN L+ MY K G +E+A KVF + +R++VSWNS++ G ++
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 274 HGLGKATVRWFEKML--RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
+G + + F +ML P+ T + VL C+ +++G L K G+ E
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEEL 239
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ +D+ + L A + + + + W +++G
Sbjct: 240 MVNNSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGG 279
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/555 (41%), Positives = 365/555 (65%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + F ++ + N +L+ Y+K + +ARKLFDEMP +D V++ +ISGY+ + +
Sbjct: 272 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 331
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ A LF ++ QF +++L + + D + GRQ+HA + D + VG+
Sbjct: 332 HKYAFDLFRELQFTAFDRKQFPFATMLSIA-SNTLDWEMGRQIHAQTIVTTADSEILVGN 390
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ + ++A +FT L ++ V W A+I+ + +K E+ L+ F++M +
Sbjct: 391 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 450
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+++S+ A AS SL GK +H+ +IKSG F G+ L+D+YAK GSI+DA + F
Sbjct: 451 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 510
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ R++VSWN+M++ AQ+G +AT++ F++M+ +G+ P+ V+FL VL+ACSH+GL++
Sbjct: 511 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 570
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG +F M + + ++P HY + VD+L R+G + A K + EMPI+P +W ++L A
Sbjct: 571 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 630
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+HKN EL AA+++F ++ D+ P++ ++NIYA+AG+ + ++ K M++ GVKK
Sbjct: 631 CRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 690
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
PA SWVE K+ HMF AND HPQ I KK +++ ++++GY PD+S L D++ +
Sbjct: 691 PAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFK 750
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L+ HSE+LA+AFALISTP GS I + KN+R C DCH+A K SK+V REI VRD+ R
Sbjct: 751 VESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTR 810
Query: 552 FHHFRDGFCSCGDYW 566
FHHFRDGFCSCGD+W
Sbjct: 811 FHHFRDGFCSCGDFW 825
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 180/349 (51%), Gaps = 3/349 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
KN ++ N +++ Y K G L EARKLFD M + VTWT LI GYSQ +Q + A LF Q
Sbjct: 81 KNTVS-TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 139
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G +P+ T ++L ++ QV +K GYD + VG++L+D Y + +
Sbjct: 140 MQRCGTEPDYVTFVTLLSGCNGHEMGNQI-TQVQTQIIKLGYDSRLIVGNTLVDSYCKSN 198
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++D A LF + + VS+NA+I G+++ EKA+ F EM G +PT F++++V
Sbjct: 199 RLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLC 258
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A + G+ +H+ VIK+ FV N L+D Y+K S+ DA K+F+ + ++D VS
Sbjct: 259 ANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS 318
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
+N +++G A G K F ++ Q F +L+ S+ + G+ A
Sbjct: 319 YNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 378
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ E + VD+ + G + A + I +A W A++ A
Sbjct: 379 VTTADSEILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 153/268 (57%), Gaps = 7/268 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +HA + + ++I + N++++ YAKCG +EA +F + + V WTA+IS Y Q
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 429
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
E + LF++M + + +Q T +S+L+AS + A+ G+Q+H+F +K G+ NV+
Sbjct: 430 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS-LSLGKQLHSFIIKSGFMSNVF 488
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
GS+LLD+YA+ + DA F + +N VSWNA+I+ +A+ E E L++F EM+ G
Sbjct: 489 SGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSG 548
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKW---VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+P S+ V +A + +G +E+G W + K + + ++VDM +SG
Sbjct: 549 LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA--SVVDMLCRSGRFN 606
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+AEK+ + + D + W+S+L C H
Sbjct: 607 EAEKLMAEMPIDPDEIMWSSVLNACRIH 634
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+ L + +H+ I+ S F +++ + +L+ YAKCG + +A + F EMP +++V+W A+
Sbjct: 465 IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAM 524
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
IS Y+QN + E + F +M+ GL+P+ + VL A ++ ++ Y
Sbjct: 525 ISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK 584
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
D +S++DM R + ++A L + +E+ W++++
Sbjct: 585 LDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG- 275
+ A ++K+G N V + K+G + A ++F ++ ++ VS N M++G + G
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
LG+A K+ + VT+ ++ S E F M++ G EP+ YV
Sbjct: 99 LGEA-----RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD---YV 150
Query: 336 TFVDLLG 342
TFV LL
Sbjct: 151 TFVTLLS 157
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/542 (42%), Positives = 346/542 (63%), Gaps = 2/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ M NT++ +C + EAR LF+ + +D +TWT +++G +QN A+ +F +M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ +Q+T S+L A GA A ++ G+Q+HA+ + Y+ NV+VGS+L+DMY++ +
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEE-GKQIHAYITRTCYEDNVFVGSALVDMYSKCRSV 328
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F + KN +SW A+I G+ + GE+A+R FSEM R+G +P F+ SV ++
Sbjct: 329 RLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSC 388
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A+ SLE+G H + SG + V N LV +Y K GSIEDA ++F+ + D VSW
Sbjct: 389 ANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 448
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
+++ G AQ G K T+ FEKML G+ P+ VTF+ VL+ACS +GL+D+G+ YF M++
Sbjct: 449 ALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQD 508
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
H + P + HY +DL R+G L +A +FI++MP P A W LL ACR+ ++E+G +
Sbjct: 509 HDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKW 568
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AAE + +LDP + ++LL +++AS G ND A+ R+ M++ VKKEP CSW++ KN VH
Sbjct: 569 AAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVH 628
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
+F A+D +HP I++K + ++ K+ + GY PD S VL E+ L HSEKLA+
Sbjct: 629 IFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAI 688
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF LI PP I I KN+RVC DCH+A KF SK+ R+I+VRD RFH F +G CSCGD
Sbjct: 689 AFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGD 748
Query: 565 YW 566
+W
Sbjct: 749 FW 750
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 198/378 (52%), Gaps = 35/378 (9%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N++L+A A+ G + + +LF +P +D V++ AL++G+S+ A + +L
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 86 R--LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-- 141
R G++P++ T+S V+ + A D GRQVH L+ G+ + GS L+DMYA+
Sbjct: 136 RDEAGVRPSRITMSGVVMVASA-LGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVG 194
Query: 142 --------FDQMD---------------------DAWFLFTALESKNEVSWNALIAGHAR 172
FD+M+ +A LF A+E ++ ++W ++ G +
Sbjct: 195 PIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQ 254
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+AL F M EG +++ S+ TA + +LE+GK +HA++ ++ + FV
Sbjct: 255 NGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFV 314
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G+ LVDMY+K S+ AE VF R++ ++++SW +M+ G Q+G G+ VR F +M R+GI
Sbjct: 315 GSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGI 374
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+ T V+++C++ L+EG + L G+ P V L G+ G ++ A +
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434
Query: 353 FIREMPIEPTAAVWGALL 370
EM + W AL+
Sbjct: 435 LFDEMSFHDQVS-WTALV 451
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 159/277 (57%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+E + +HA+I + +++++ + + +++ Y+KC + A +F M K++++W
Sbjct: 287 CGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISW 346
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GY QN E A+ +FS+M R G+KP+ FTL SV+ + A+ ++ G Q H L
Sbjct: 347 TAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEE-GAQFHCLAL 405
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G V V ++L+ +Y + ++DA LF + ++VSW AL+ G+A+ + ++ +
Sbjct: 406 VSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETID 465
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F +ML +G +P ++ V +A + +G +++G+ + H ++ +V ++D+
Sbjct: 466 LFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR-SYFHSMQQDHDIVPLDDHYTCMIDL 524
Query: 240 YAKSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHG 275
Y++SG ++ AE+ ++ + D W ++L+ C G
Sbjct: 525 YSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 155/360 (43%), Gaps = 70/360 (19%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N+ G+SLL AR + D LFT+L ++ VS+NAL+AG +R +A + +L
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 188 RE--GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
R+ G P+ + S V ++ G G+ VH +++ G AF G+ LVDMYAK G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 246 IEDAEKVFNR---------------LLK----------------RDVVSWNSMLTGCAQH 274
I DA +VF+ LL+ RD ++W +M+TG Q+
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
GL + F +M G+ +Q TF +LTAC L+EG+ A + + E
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 335 VTFVDL-------------------------------LGRAGLLDRALKFIREMP---IE 360
VD+ G+ G + A++ EM I+
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375
Query: 361 PTAAVWGALLGACRMHKNVELGA--YAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
P G+++ +C ++E GA + + L P+ + + L+ +Y G + DA R
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALV-TLYGKCGSIEDAHR 434
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LR 289
++ NTL+ YA SG + A +VF+ + R++V+ NS+L+ A+ GL + R F + R
Sbjct: 47 YLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQR 106
Query: 290 NGIAPNQV 297
+ ++ N +
Sbjct: 107 DAVSYNAL 114
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/566 (41%), Positives = 351/566 (62%), Gaps = 4/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + +H+ ++ S +D+ + T+++ YAK ++ +RK+F+ M ++++W
Sbjct: 258 CVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSW 317
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALISGY Q+ Q + AI LF ML + PN FT SSVLKA A D G+Q+H +
Sbjct: 318 TALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKAC-ASLPDFGIGKQLHGQTI 376
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G VG+SL++MYAR M+ A F L KN +S+N +A+ + +++
Sbjct: 377 KLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN 436
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
E+ G + F+Y+ + + A G++ +G+ +HA ++KSG + N L+ MY+
Sbjct: 437 --HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYS 494
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+ E A +VFN + R+V++W S+++G A+HG + F +ML G+ PN+VT++
Sbjct: 495 KCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIA 554
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GL+DE +F M H + P HY VDLLGR+GLL A++FI MP +
Sbjct: 555 VLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFD 614
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VW LG+CR+H+N +LG +AA++I E +PHD +ILL+N+YAS GR +D A R
Sbjct: 615 ADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALR 674
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK+ + KE SW+E N VH F D +HPQ I+ + E++ KIK +GY+P++
Sbjct: 675 KSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTD 734
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + +++E L HSEK+A+A+ALISTP I + KN+RVCGDCH+A K+ S V
Sbjct: 735 FVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVT 794
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFHH +DG CSC DYW
Sbjct: 795 GREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 186/358 (51%), Gaps = 8/358 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMV 59
C L+ +++H ++ S D + N+++ Y+KCG + A +F M +D+V
Sbjct: 49 CIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLV 108
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLG---LKPNQFTLSSVLKASGAGATDDKFGRQV 116
+W+A+IS ++ N A++ F ML+ + PN++ +++L+ S + G +
Sbjct: 109 SWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLR-SCSNPLFFTTGLAI 167
Query: 117 HAFCLKYGY-DWNVYVGSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNALIAGHARKS 174
AF LK GY D +V VG +L+DM+ + + A +F ++ KN V+W +I +++
Sbjct: 168 FAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLG 227
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ A+ F +L + P F+ +S+ +A GK +H+ VI+SG FVG
Sbjct: 228 LLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGC 287
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
TLVDMYAKS ++E++ K+FN +L +V+SW ++++G Q + ++ F ML + P
Sbjct: 288 TLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTP 347
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
N TF VL AC+ G+ K G+ + +++ R+G ++ A K
Sbjct: 348 NCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARK 405
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 136/283 (48%), Gaps = 8/283 (2%)
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL- 155
SS+L + + + + G+ +H + G + + +SL+ +Y++ ++A +F +
Sbjct: 42 SSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMG 101
Query: 156 -ESKNEVSWNALIAGHARKSEGEKALRTFSEML---REGFEPTHFSYSSVFTALASTGSL 211
++ VSW+A+I+ A S +AL TF ML R P + ++++ + ++
Sbjct: 102 HHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFF 161
Query: 212 EQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSG-SIEDAEKVFNRLLKRDVVSWNSMLT 269
G + A ++K+G VG L+DM+ K G I+ A VF+++ +++V+W M+T
Sbjct: 162 TTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMIT 221
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
+Q GL V F ++L + P++ T +L+AC G+ + + + G+
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS 281
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ T VD+ ++ ++ + K M + W AL+
Sbjct: 282 DVFVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISG 323
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/571 (40%), Positives = 354/571 (61%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + VH ++ S F D + ++N Y + G +D ARK+FDE + + W
Sbjct: 88 CAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVW 147
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHA 118
AL + + + L+ QM +G+ ++FT + VLKA S + + G+++HA
Sbjct: 148 NALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHA 207
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L++GY+ N++V ++LLD+YA+F + A +F A+ +KN VSW+A+IA A+ K
Sbjct: 208 HILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMK 267
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F M+ E + P + +V A A +LEQGK +H ++++ G + V N L
Sbjct: 268 ALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNAL 327
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MY + G I ++VF+ + RDVVSWNS+++ HG GK ++ FE M+ G +P+
Sbjct: 328 ITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSY 387
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
++F+ VL ACSHAGL++EG+ F +++ K+ + P HY VDLLGRA LD A+K I
Sbjct: 388 ISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 447
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+M EP VWG+LLG+CR+H NVEL A+ +FEL+P ++G ++LLA+IYA A ++
Sbjct: 448 DMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSE 507
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A K+++ G++K P CSW+E K V+ FV+ D+ +PQ IH ++S ++K GY
Sbjct: 508 AKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGY 567
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VP ++ VL D++E+E + HSEKLA+AF LI+T G TI I+KN+R+C DCH+ KF
Sbjct: 568 VPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKF 627
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK REI+VRD NRFHHF+DG CSCGDYW
Sbjct: 628 ISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT ++ + + A SL G VH ++ SG F+ L++MY + GSI+ A KV
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL- 311
F+ +R + WN++ A G GK + + +M GI ++ T+ VL AC + L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 312 ---LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
L +G+ A + +HG E T +D+ + G + A MP + + W A
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVS-WSA 254
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIYASAGRL 413
++ AC + + A ++ L+ HDS P+ + + N+ + L
Sbjct: 255 MI-ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGL 299
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/555 (41%), Positives = 365/555 (65%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + F ++ + N +L+ Y+K + +ARKLFDEMP +D V++ +ISGY+ + +
Sbjct: 232 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 291
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ A LF ++ QF +++L + + D + GRQ+HA + D + VG+
Sbjct: 292 HKYAFDLFRELQFTAFDRKQFPFATMLSIA-SNTLDWEMGRQIHAQTIVTTADSEILVGN 350
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ + ++A +FT L ++ V W A+I+ + +K E+ L+ F++M +
Sbjct: 351 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 410
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+++S+ A AS SL GK +H+ +IKSG F G+ L+D+YAK GSI+DA + F
Sbjct: 411 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 470
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ R++VSWN+M++ AQ+G +AT++ F++M+ +G+ P+ V+FL VL+ACSH+GL++
Sbjct: 471 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 530
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG +F M + + ++P HY + VD+L R+G + A K + EMPI+P +W ++L A
Sbjct: 531 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+HKN EL AA+++F ++ D+ P++ ++NIYA+AG+ + ++ K M++ GVKK
Sbjct: 591 CRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 650
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
PA SWVE K+ HMF AND HPQ I KK +++ ++++GY PD+S L D++ +
Sbjct: 651 PAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFK 710
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L+ HSE+LA+AFALISTP GS I + KN+R C DCH+A K SK+V REI VRD+ R
Sbjct: 711 VESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTR 770
Query: 552 FHHFRDGFCSCGDYW 566
FHHFRDGFCSCGD+W
Sbjct: 771 FHHFRDGFCSCGDFW 785
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 153/267 (57%), Gaps = 7/267 (2%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +HA + + ++I + N++++ YAKCG +EA +F + + V WTA+IS Y Q
Sbjct: 331 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 390
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
E + LF++M + + +Q T +S+L+AS + A+ G+Q+H+F +K G+ NV+
Sbjct: 391 GFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS-LSLGKQLHSFIIKSGFMSNVFS 449
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
GS+LLD+YA+ + DA F + +N VSWNA+I+ +A+ E E L++F EM+ G
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509
Query: 192 EPTHFSYSSVFTALASTGSLEQGKW---VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
+P S+ V +A + +G +E+G W + K + + ++VDM +SG +
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA--SVVDMLCRSGRFNE 567
Query: 249 AEKVFNRL-LKRDVVSWNSMLTGCAQH 274
AEK+ + + D + W+S+L C H
Sbjct: 568 AEKLMAEMPIDPDEIMWSSVLNACRIH 594
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+ L + +H+ I+ S F +++ + +L+ YAKCG + +A + F EMP +++V+W A+
Sbjct: 425 IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAM 484
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
IS Y+QN + E + F +M+ GL+P+ + VL A ++ ++ Y
Sbjct: 485 ISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK 544
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
D +S++DM R + ++A L + +E+ W++++
Sbjct: 545 LDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 191 FEPTHFSYSSVFTALASTGS----LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
F P + T+LAS S L + A ++K+G N V + K+G +
Sbjct: 4 FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
A ++F ++ ++ VS N M++G + G LG+A K+ + VT+ ++
Sbjct: 64 SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA-----RKLFDGMVERTAVTWTILIGG 118
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
S E F M++ G EP+ YVTFV LL
Sbjct: 119 YSQLNQFKEAFELFVQMQRCGTEPD---YVTFVTLLS 152
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/561 (40%), Positives = 341/561 (60%), Gaps = 2/561 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T+ L+ + +HA + F+ D+A+ N ++ Y K GC+ + KL++ M +D+++W
Sbjct: 426 TNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWN 485
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A +SG + + +F ML G PN +T S+L S + D +GRQVHA +K
Sbjct: 486 AYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISIL-GSCSCLFDVHYGRQVHAHIIK 544
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
D N +V ++L+DMYA+ ++DA F L ++ +W +I +A+ ++GEKAL
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M +EG +P F+ + + +S SLE G+ +H+ V KSG FVG+ LVDMYAK
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +E+AE +F L++RD ++WN+++ G AQ+G G + F ML GI+P+ VTF +
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGI 724
Query: 303 LTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ACSH GL++EG+ +F ++ + G+ P H VD+LGR G D FI++M +
Sbjct: 725 LSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQ 784
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
A +W +LGA +MH N+ LG AA ++FEL P + +ILL+NI+A+ GR +D R R
Sbjct: 785 NALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRS 844
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M GVKKEP CSWVE VH FV++D +HPQ IH K E+ ++ I YVP + +
Sbjct: 845 LMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEY 904
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + E++ L+ HSE+LAL FALIST I I KN+R+C DCH K S +
Sbjct: 905 VLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITN 964
Query: 542 REIIVRDTNRFHHFRDGFCSC 562
+EI+VRD RFHHF++G CSC
Sbjct: 965 QEIVVRDVRRFHHFKNGACSC 985
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 201/379 (53%), Gaps = 5/379 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + L A+ +H I+ D + +++N YAKC AR + +MP +D+V+
Sbjct: 121 ECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVS 180
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTALI G ++I LF +M G+ PN+FTL++ LKA D G+Q+HA
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD-LGKQMHAQA 239
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G +++VGS+L+D+YA+ +++ A +F + +N+V+WN L+ G+A++ + L
Sbjct: 240 FKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVL 299
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F M+ + F+ ++V A++ +L+QG+ +H+ +IK G + F+G LVDMY
Sbjct: 300 KLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMY 359
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G DA VF + K D+V W++++T Q G + +++ F M PNQ T
Sbjct: 360 SKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTIC 419
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A ++ G L GQ A + K+G E + A V + + G + K M ++
Sbjct: 420 SLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VD 478
Query: 361 PTAAVWGALLGA---CRMH 376
W A L C M+
Sbjct: 479 RDLISWNAYLSGLHDCGMY 497
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 187/349 (53%), Gaps = 1/349 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + +HA D+ + + +++ YAKCG ++ A K+F MP ++ VTW
Sbjct: 223 CSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTW 282
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L++GY+Q + LF M+ L +K N+FTL++VLK A + + K G+ +H+ +
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGC-ANSKNLKQGQVIHSLII 341
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K GY+ N ++G L+DMY++ DA +F ++ + V W+ALI ++ + E++++
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M P ++ S+ +A +TG+L+ G+ +HA V K G + V N LV MY
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K+G + D K++ ++ RD++SWN+ L+G G+ + F ML G PN TF+
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+L +CS + G+ A + K+ ++ +D+ + L+ A
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 185/337 (54%), Gaps = 16/337 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + R VHAHI+ + ++ + +++ YAKC L++A F+ + V+D+ TW
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+ Y+Q +Q E A+ F QM + G+KPN+FTL+ L + A+ + G+Q+H+
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEG-GQQLHSMVF 644
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +++VGS+L+DMYA+ M++A LF AL ++ ++WN +I G+A+ +G KAL
Sbjct: 645 KSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALT 704
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F ML EG P +++ + +A + G +E+GK + + G + V + +VD+
Sbjct: 705 AFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFG-ISPTVDHCACMVDI 763
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LG-KATVRWFEKMLRNGIAP 294
+ G ++ E ++ L ++ + W ++L H LG KA + FE + P
Sbjct: 764 LGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFE------LQP 817
Query: 295 -NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ +++ + + G D+ + +LM GV+ E
Sbjct: 818 EEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
YSS+ AS SL K +H ++K + + +LV++YAK A V ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
RDVVSW +++ G G ++ F++M GI PN+ T L ACS LD G+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A K G+ + VDL + G ++ A K MP E W LL
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/603 (39%), Positives = 360/603 (59%), Gaps = 40/603 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +H+HI + D+ + N ++ Y KC + EAR++FD M +D+++W
Sbjct: 268 CNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISW 327
Query: 62 TALISGYSQNDQPENAII-----LFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQ 115
+A+I+GY+Q+ + I L +M R G+ PN+ T S+L+A A GA + GRQ
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQ--GRQ 385
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQMDD----AW--FL-------- 151
+HA K G++ + + +++ +MYA+ F +M + AW FL
Sbjct: 386 IHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGD 445
Query: 152 -------FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
F+ + ++N VSWN +IAG+A+ + K S M EGF+P + ++ A
Sbjct: 446 LSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEA 505
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ LE+GK VHA +K G + V +L+ MY+K G + +A VF+++ RD V+W
Sbjct: 506 CGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAW 565
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
N+ML G QHG G V F++ML+ ++PN++T V++ACS AGL+ EG+ F +M++
Sbjct: 566 NAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQE 625
Query: 325 H-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ P + HY VDLLGRAG L A +FI+ MP EP +VW ALLGAC+ H NV+L
Sbjct: 626 DFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAE 685
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
AA I EL+P + +I L+NIYA AGR +D+ + R++M + G+KK+ S +E +
Sbjct: 686 RAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRI 745
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H FVA D AHP+ IH + +++++K+ GY PD VL D ++E L HSEKLA
Sbjct: 746 HTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLA 805
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+A+ L+ TP G+ I I KN+RVCGDCH+A KF SK+ +REI+ RD NRFH+F +G CSCG
Sbjct: 806 IAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCG 865
Query: 564 DYW 566
D+W
Sbjct: 866 DFW 868
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 209/374 (55%), Gaps = 7/374 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ ++ ++VH + + DI + N+++N Y+K + A ++F M ++D+VTW
Sbjct: 66 CAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTW 125
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++I+ Y+ N+ P A F +M ++PN+ T S+LKA + +K GR++H
Sbjct: 126 SSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEK-GRKIHTIVK 184
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + +V V ++L+ MY++ ++ A +F + +N VSW A+I +A+ + +A
Sbjct: 185 AMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFE 244
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +ML+ G P ++ S+ + + +L +G+ +H+H+ + G + V N L+ MY
Sbjct: 245 LYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYC 304
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL-GKATV----RWFEKMLRNGIAPNQ 296
K S+++A ++F+R+ KRDV+SW++M+ G AQ G K ++ + E+M R G+ PN+
Sbjct: 305 KCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNK 364
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
VTF+ +L AC+ G L++G+ A + K G E + + ++ + G + A + +
Sbjct: 365 VTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424
Query: 357 MPIEPTAAVWGALL 370
M + A W + L
Sbjct: 425 MANKNVVA-WTSFL 437
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 231/535 (43%), Gaps = 77/535 (14%)
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
AI L + + GL N T V++ A A + G+ VH + G + ++Y+G+SL+
Sbjct: 40 AIQLLGIIKQRGLLVNSNTYGCVIEHC-AKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
+ Y++F+ + A +F + ++ V+W+++IA +A + KA TF M EP
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
++ S+ A + LE+G+ +H V G + V L+ MY+K G I A +VF+++
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+R+VVSW +++ AQH +E+ML+ GI+PN VTF+ +L +C+ L+ G+
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278
Query: 317 GYFALMKKHGVEP------------------EEAHYV-------------TFVDLLGRAG 345
+ + + G+E +EA + + ++G
Sbjct: 279 RIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG 338
Query: 346 LLDRA--------LKFIREMPIEPTAAVWGALLGACRMHKNVELG----AYAAERIFELD 393
D+ L+ +R + P + ++L AC H +E G A ++ FEL
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL- 397
Query: 394 PHDSGPHILLANIYASAGRLNDAARARKMMKESGV-----------------KKEPACSW 436
D + N+YA G + +A + M V E S
Sbjct: 398 --DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSE 455
Query: 437 VETKNAV--HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAK 494
+ T+N V ++ +A + Q I K + E+ +K G+ PD V++ + A
Sbjct: 456 MPTRNVVSWNLMIA---GYAQNGDIVKVF-ELLSSMKAEGFQPDRVTVITILEACGALAG 511
Query: 495 LQ----VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
L+ VH+E + L + S I + CG A K+ R+ +
Sbjct: 512 LERGKLVHAEAVKLGLESDTVVATSLIGMYSK---CGQVAEARTVFDKMSNRDTV 563
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 181/432 (41%), Gaps = 45/432 (10%)
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
W AG R+ A++ + + G +Y V A E GK VH +
Sbjct: 29 WRLCKAGRLRE-----AIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLD 83
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+ G ++ ++GN+L++ Y+K + AE+VF R+ RDVV+W+SM+ A +
Sbjct: 84 ELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFD 143
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
FE+M I PN++TFL +L AC++ +L++G+ ++K G+E + A + +
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS 203
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPH 400
+ G + A + +M E W A++ A H+ + E++ + + P ++
Sbjct: 204 KCGEISVACEVFHKMT-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP-NAVTF 261
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEP-----------ACSWVETKNAVHMFVAN 449
+ L N + LN R + E G++ + C+ V+ + ++
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK 321
Query: 450 DDAHPQRAMI-------HKKWREIS------EKIKQIGYVPDSSHVLSY----ADQQERE 492
D AMI +K I E++++ G P+ +S E
Sbjct: 322 RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALE 381
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
Q+H+E + F L + + ++ CG + A + SK+ + ++ +
Sbjct: 382 QGRQIHAELSKVGFELDRSLQTAIFNMYAK---CGSIYEAEQVFSKMANKNVVA-----W 433
Query: 553 HHFRDGFCSCGD 564
F + CGD
Sbjct: 434 TSFLSMYIKCGD 445
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/544 (42%), Positives = 340/544 (62%), Gaps = 2/544 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ +I + NT++ +C + EA +LFD MP KD ++WT +I+G +QN + A+ F +
Sbjct: 201 EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKE 260
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M G +QFT SVL A G D+ G+Q+HA+ ++ Y N++VGS+LLDMY +
Sbjct: 261 MGIEGFCMDQFTFGSVLTACGGFLALDE-GKQIHAYIIRTDYQDNIFVGSALLDMYCKCR 319
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ A +F + KN +SW A++ G+ + E+A+R F +M R P F+ SV +
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVIS 379
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ A+ SLE+G H + SG V N L+ +Y K GS+E A ++F+ + RD VS
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM- 322
W ++++G AQ G T+ FE ML +GI P+ VTF+ VL+ACS AGL+++G YF M
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMV 499
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K+H + P HY +DLL RAG L+ A FI +MP P A W LL +CR++ N+E+G
Sbjct: 500 KEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIG 559
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
+AAE + +L+P + +ILL++IYA+ G+ +D A+ RK M+E GVKKEP SW++ KN
Sbjct: 560 KWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNK 619
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
VH+F A+D + P I+ K + K+ + GYVPD S VL ++ E+ L HSEKL
Sbjct: 620 VHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKL 679
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF L+ P G I + KN+RVCGDCH+A K+ S++ +REI+VRD RFH F+DG CSC
Sbjct: 680 AIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSC 739
Query: 563 GDYW 566
GD+W
Sbjct: 740 GDFW 743
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 207/399 (51%), Gaps = 40/399 (10%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L LK AR V HI + ++ NT+L+AY+K G L + +++FD MP D+V+W +L
Sbjct: 53 LGDLKNARNVFDHIP----QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSL 108
Query: 65 ISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVL-KASGAGATDDKFGRQVHAFCLK 122
+SGY+ N ++ +++ ML+ G + N+ T S++L +S G D GRQ+H K
Sbjct: 109 LSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVD--LGRQIHGQIFK 166
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKN----------------------- 159
+GY ++VGS L+DMYA+ ++DA +F + KN
Sbjct: 167 FGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQL 226
Query: 160 --------EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
+SW +I G + ++A+ F EM EGF F++ SV TA +L
Sbjct: 227 FDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLAL 286
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
++GK +HA++I++ Q FVG+ L+DMY K +++ AE VF ++ ++V+SW +ML G
Sbjct: 287 DEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGY 346
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
Q+G + VR F M RN I P+ T V+++C++ L+EG + G+
Sbjct: 347 GQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFV 406
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ L G+ G L+ A + EM I + W AL+
Sbjct: 407 TVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS-WTALV 444
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 173/337 (51%), Gaps = 10/337 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L E + +HA+I+ + ++++I + + +L+ Y KC + A +F +M K++++W
Sbjct: 280 CGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY QN E A+ +F M R + P+ FTL SV+ + A+ ++ G Q H L
Sbjct: 340 TAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEE-GAQFHGQAL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G V V ++L+ +Y + ++ A LF ++ ++EVSW AL++G+A+ + + +
Sbjct: 399 ASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETIS 458
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F ML G P ++ V +A + G +E+G + V + + ++D+
Sbjct: 459 LFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLL 518
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNGIAPNQ 296
+++G +E+A+ N++ D + W ++L+ C +G +GK W + L N
Sbjct: 519 SRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGK----WAAESLHKLEPQNP 574
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+++ + + + G D+ M++ GV+ E H
Sbjct: 575 ASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGH 611
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN------- 265
Q K +H +I++ F+ N L++ Y K G +++A VF+ + + ++ SWN
Sbjct: 23 QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYS 82
Query: 266 ------------------------SMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFL 300
S+L+G A +GL +VR + ML++G + N++TF
Sbjct: 83 KLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFS 142
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L S+ G +D G+ + K G + VD+ + G ++ A + E+P E
Sbjct: 143 TMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIP-E 201
Query: 361 PTAAVWGALL-GACRMHKNVELGAYAAERIFELDP 394
V+ ++ G R VE AE++F+ P
Sbjct: 202 KNIVVYNTMITGLLRCRFIVE-----AEQLFDNMP 231
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/567 (40%), Positives = 349/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L ++ VH ++ F ++ + + + + Y+KCG L +A K F+EMP KD V W
Sbjct: 186 CTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLW 245
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I G+ +N + A+ + +M+ + +Q L S L A A FG+ +HA L
Sbjct: 246 TSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSA-LKASSFGKSLHATIL 304
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA-LESKNEVSWNALIAGHARKSEGEKAL 180
K G+++ ++G++L DMY++ M A +F + + VS A+I G+ + EKAL
Sbjct: 305 KLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKAL 364
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
TF ++ R G EP F+++S+ A A+ LE G +H V+K + FV +TLVDMY
Sbjct: 365 STFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMY 424
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G + + ++F+ + D ++WN+++ +QHGLG+ + F M+ G+ PN VTF+
Sbjct: 425 GKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFV 484
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L CSHAG++++G YF+ M+K +GV P+E HY +DLLGRAG L A FI MP
Sbjct: 485 NLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPF 544
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP W + LGAC++H ++E +AA+++ +L+P +SG H+LL+NIYA + D
Sbjct: 545 EPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSL 604
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RKM+K+ + K P SWV+ +N H+F D +HPQ+ I++K + ++IK+IGYVP +
Sbjct: 605 RKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQT 664
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL D +E L HSE++A+AF+L++ P G I +KKN+RVC DCHSA KF SKV
Sbjct: 665 ESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKV 724
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
ER IIVRD +RFHHF +G CSCGDYW
Sbjct: 725 TERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 197/375 (52%), Gaps = 9/375 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K+L + + +HA ++ + + N LN Y+KCG LD KLFD+M ++MV+WT++I
Sbjct: 89 KELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSII 148
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYG 124
+G++ N + + A+ F QM G QF LSSVL+A + GA +FG QVH +K G
Sbjct: 149 TGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI--QFGTQVHCLVVKCG 206
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ ++VGS+L DMY++ ++ DA F + K+ V W ++I G + + +KAL +
Sbjct: 207 FGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYM 266
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M+ + S +A ++ + GK +HA ++K G + F+GN L DMY+KSG
Sbjct: 267 KMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSG 326
Query: 245 SIEDAEKVFNRLLKRD---VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ A VF + D +VS +++ G + + + F + R GI PN+ TF
Sbjct: 327 DMVSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTS 384
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
++ AC++ L+ G + K + + T VD+ G+ GL D +++ E+ P
Sbjct: 385 LIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NP 443
Query: 362 TAAVWGALLGACRMH 376
W L+G H
Sbjct: 444 DEIAWNTLVGVFSQH 458
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A T L +GK +HA +I+ G F+ N +++Y+K G ++ K+F+++ +R++VSW
Sbjct: 86 ARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWT 145
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
S++TG A + + + F +M G Q VL AC+ G + G L+ K
Sbjct: 146 SIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKC 205
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G E D+ + G L A K EMP + A +W +++
Sbjct: 206 GFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKD-AVLWTSMI 249
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/504 (44%), Positives = 332/504 (65%), Gaps = 2/504 (0%)
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
++ GY + + A+ LFS + + G K +Q TL++ KA G D+ G+Q+HA +K
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQ-GKQIHAHAIKA 59
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+D +++V S +LDMY + M +A +F + + ++V+W ++I+G ++ALR +
Sbjct: 60 GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 119
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
M + P ++++++ A + +LEQG+ +HA+VIK FVG +LVDMYAK
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G+IEDA ++F ++ R++ WN+ML G AQHG + V F+ M +GI P++V+F+ +L
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ACSHAGL E Y ++ +G+EPE HY VD LGRAGL+ A K I MP + +
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
A++ ALLGACR+ +VE G A R+F L+P DS ++LL+NIYA+A R +D ARKM
Sbjct: 300 ASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 359
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK VKK+P SW++ KN +H+FV +D +HPQ +I+ K E+ + I++ GYVPD+ V
Sbjct: 360 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 419
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L + +E+E L HSEKLA+A+ LISTP +TI + KN+RVCGDCH+A K+ SKV ER
Sbjct: 420 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 479
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EI++RD NRFHHFRDG CSCGDYW
Sbjct: 480 EIVLRDANRFHHFRDGVCSCGDYW 503
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + + +HAH + + F +D+ + + IL+ Y KCG + A +F+ + D V W
Sbjct: 40 CGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAW 99
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISG N + A+ ++ +M + + P+++T ++++KAS T + GRQ+HA +
Sbjct: 100 TSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC-VTALEQGRQLHANVI 158
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +VG+SL+DMYA+ ++DA+ LF + +N WNA++ G A+ E+A+
Sbjct: 159 KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVN 218
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTG-SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M G EP S+ + +A + G + E +++H+ G + + LVD
Sbjct: 219 LFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDAL 278
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
++G +++A+KV + + S N L G
Sbjct: 279 GRAGLVQEADKVIETMPFKASASINRALLG 308
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L++ R +HA+++ +D + ++++ YAKCG +++A +LF +M V+++ W A++ G
Sbjct: 147 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 206
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYD 126
+Q+ E A+ LF M G++P++ + +L A S AG T + + +H+ YG +
Sbjct: 207 LAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY-EYLHSMPNDYGIE 265
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+ S L+D R + +A + + K S N + G R
Sbjct: 266 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 311
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/554 (42%), Positives = 346/554 (62%), Gaps = 3/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA L ND + + + Y+K G EA++LFDEMP +++ W A IS + +
Sbjct: 80 IHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGR 139
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P AI F + R+G +P+ T + L A D GRQ+H ++ G++ +V V +
Sbjct: 140 PGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLD-LGRQLHGLVIRSGFEGDVSVAN 198
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
++D+Y + +++ A +F + +N VSW ++A + E EKA F +EG E
Sbjct: 199 GIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIEL 258
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T + SSV +A A LE G+ VHA +K+ + FVG+ LVDMY K GSIED E+VF
Sbjct: 259 TDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVF 318
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + +R++VSWN+M++G A G + FE+M +A N VT +CVL+ACS G +
Sbjct: 319 HEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVK 377
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G F M+ ++ +EP HY D+LGRAG+++RA +F+++MPI PT +VWGALL A
Sbjct: 378 LGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNA 437
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR++ ELG AA+ +F+LDP DSG H+LL+N++A+AGR ++A RK MK+ G+KK
Sbjct: 438 CRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGA 497
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CSWV KN VH+F A D +H + + I ++ +++ GY+PD+++ L +++E+
Sbjct: 498 GCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKM 557
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
++ HSEK+ALAF LI+ PPG I I KN+R+CGDCHSAFKF S +V REIIVRD NRF
Sbjct: 558 TEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRF 617
Query: 553 HHFRDGFCSCGDYW 566
H FRD CSC D+W
Sbjct: 618 HRFRDSQCSCRDFW 631
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 166/345 (48%), Gaps = 2/345 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+K + A+ L P + +VTWTALISG QN +A++ FS+M R +KPN FT
Sbjct: 2 YSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTF 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
KAS A G+Q+HA LK G + +VG S DMY++ +A LF +
Sbjct: 62 PCAFKASTALCLPFA-GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+N WNA I+ KA+ F E R G EP ++ + A A L+ G+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H VI+SG + V N ++D+Y K +E AE VFN + +R+ VSW +M+ C Q+
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ F + GI V++A + L+ G+ AL K VE +
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
VD+ G+ G ++ + EMP E W A++ +V++
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISGYAHQGDVDM 344
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 154/286 (53%), Gaps = 15/286 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +H ++ S F+ D+++ N I++ Y KC ++ A +F+ M ++ V+W
Sbjct: 169 CADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSW 228
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++ QND+ E A ++F + G++ + +SSV+ A AG + +FGR VHA +
Sbjct: 229 CTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAY-AGISGLEFGRSVHALAV 287
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +++VGS+L+DMY + ++D +F + +N VSWNA+I+G+A + + + A+
Sbjct: 288 KACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMT 347
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVGNTL 236
F EM E + + V +A + G+++ G + + I+ G + A +
Sbjct: 348 LFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYA----CI 402
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG---LGK 278
DM ++G +E A + ++ R +S W ++L C +G LGK
Sbjct: 403 ADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGK 448
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY++ D + A L ++ V+W ALI+G + AL FS+M RE +P F+
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ F A + GK +HA +K G FVG + DMY+K+G +A+++F+ +
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
R+V WN+ ++ G + F + R G P+ +TF L AC+ A LD G+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
L+ + G E + + +D+ G+ ++ A M + + W ++ AC +
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVS-WCTMVAACEQND 239
Query: 378 NVE 380
E
Sbjct: 240 EKE 242
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/561 (41%), Positives = 346/561 (61%), Gaps = 11/561 (1%)
Query: 8 LKEARIVHA-HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+K+ +IV A S D+ NTI+ YA+ G +DEAR+LFDE PV+D+ TWTA++S
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY QN E A LF +M + N+ + +++L G + +
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN +++ YA+ ++ +A LF + ++ VSW A+IAG+++ +ALR F +M
Sbjct: 346 WN-----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
REG S+SS + A +LE GK +H ++K G + FVGN L+ MY K GSI
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E+A +F + +D+VSWN+M+ G ++HG G+ +R+FE M R G+ P+ T + VL+AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH GL+D+G+ YF M + +GV P HY VDLLGRAGLL+ A ++ MP EP AA+
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WG LLGA R+H N EL AA++IF ++P +SG ++LL+N+YAS+GR D + R M++
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK P SW+E +N H F D+ HP++ I E+ ++K+ GYV +S VL
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E ++ HSE+LA+A+ ++ G I + KN+RVC DCH+A K+ +++ R II
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD NRFHHF+DG CSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 189/437 (43%), Gaps = 55/437 (12%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ NT+L+ YA+ GC+D+AR +FD MP K+ V+W AL+S Y QN + E A +LF
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS 213
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
L L +K F + ++ WN +++ YA+
Sbjct: 214 RENWALVSWNCLLGGFVKKKKIVEARQFF----DSMNVRDVVSWN-----TIITGYAQSG 264
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++D+A LF ++ +W A+++G+ + E+A F +M E S++++
Sbjct: 265 KIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLA 320
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+E K + NT++ YA+ G I +A+ +F+++ KRD VS
Sbjct: 321 GYVQGERMEMAK----ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +M+ G +Q G +R F +M R G N+ +F L+ C+ L+ G+ +
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 324 KHGVEP------------------EEAH-------------YVTFVDLLGRAGLLDRALK 352
K G E EEA+ + T + R G + AL+
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 353 FIREMP---IEPTAAVWGALLGACRMHKNVELGA---YAAERIFELDPHDSGPHILLANI 406
F M ++P A A+L AC V+ G Y + + + P +S + + ++
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP-NSQHYACMVDL 555
Query: 407 YASAGRLNDAARARKMM 423
AG L DA K M
Sbjct: 556 LGRAGLLEDAHNLMKNM 572
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 35/302 (11%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++ Y + G + ARKLFDEMP +D+V+W +I GY +N A LF M
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM------ 152
Query: 91 PNQFTLSSVLKASG---AGATDDK---FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
P + S SG G DD F R K WN +LL Y + +
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWN-----ALLSAYVQNSK 203
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFT 203
M++A LF + E+ VSWN L+ G +K + +A + F M +R+ S++++ T
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD-----VVSWNTIIT 258
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A +G +++ + + F +V Y ++ +E+A ++F+++ +R+ VS
Sbjct: 259 GYAQSGKIDEAR----QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+ML G Q + F+ M N T+ ++T + G + E + F M
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVM----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 324 KH 325
K
Sbjct: 371 KR 372
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 158/349 (45%), Gaps = 28/349 (8%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+DI N +++Y + G +EA ++F MP V++ +ISGY +N + E A LF +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
L + ++ G + F + WN ++L YA+
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELF----EIMPERDVCSWN-----TMLSGYAQNGC 172
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+DDA +F + KN+VSWNAL++ + + S+ E+A F RE + S++ +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS--RENW--ALVSWNCLL-- 226
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
G +++ K V A + V NT++ YA+SG I++A ++F+ +DV +
Sbjct: 227 ---GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +M++G Q+ + + F+KM N+V++ +L ++ + F +M
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
V + + T + + G + A +MP + W A++
Sbjct: 340 CRNV----STWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAG 383
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + +H ++ ++ + N +L Y KCG ++EA LF EM KD+V+W
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GYS++ E A+ F M R GLKP+ T+ +VL A DK + +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG N + ++D+ R ++DA
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDA 565
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/567 (40%), Positives = 356/567 (62%), Gaps = 17/567 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L +H +L + F+ ++ + + +++ YAK G LD A K+F + D+V+W
Sbjct: 448 CTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSW 507
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TA+I+GY+Q+D+ A+ LF +M G+K + +S + A +G A D GRQ+HA
Sbjct: 508 TAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ--GRQIHAQS 565
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
GY ++ +G++L+ +YAR ++ +A+ F + +K+ VSWN+L++G A+ E+AL
Sbjct: 566 CLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEAL 625
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F++M + G E F++ S +A A+ ++ GK +H + K+G V N L+ +Y
Sbjct: 626 NIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLY 685
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G+I+D +SWNSM+TG +QHG G ++ FE M + + PN VTF+
Sbjct: 686 AKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFV 732
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH GL+DEG YF M + H + P+ HY VDLLGR+GLL RA +F+ EMPI
Sbjct: 733 GVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPI 792
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A VW LL AC +HKN+++G +AA + EL+P DS ++L++N+YA +G+ + R
Sbjct: 793 QPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRT 852
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+MMK+ GVKKEP SWVE N+VH F A D HP+ MI++ R + + + GYVP
Sbjct: 853 RQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRC 912
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ +LS A+ ++++ +HSE+LA+AF L+S + +++ KN+RVC DCH+ K SK+
Sbjct: 913 NSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKI 972
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+R IIVRD+ RFHHF+ G CSC DYW
Sbjct: 973 TDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 18/350 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT ++ + + +H +L F ++ + N ++ Y++ G L A ++F M +D V++
Sbjct: 261 CTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSY 320
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+LISG +Q A+ LF +M KP+ T++S+L A + GA + G+Q H++
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPN--GKQFHSYA 378
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G ++ V SLLD+Y + + A F + + K+
Sbjct: 379 IKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC---------------YGQLDNLNKSF 423
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F++M EG P F+Y S+ + G+ + G+ +H V+K+G Q +V + L+DMY
Sbjct: 424 QIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 483
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G ++ A K+F RL + DVVSW +M+ G QH + F++M GI + + F
Sbjct: 484 AKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFA 543
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
++AC+ LD+G+ A G + + V L R G + A
Sbjct: 544 SAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREA 593
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 176/363 (48%), Gaps = 31/363 (8%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + S F++ + N +++ Y K G L A+K+F+ + +D V+W A+ISG SQN
Sbjct: 186 IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGY 245
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A++LF Q++ +F +FG+Q+H LK G+ YV +
Sbjct: 246 EEEAMLLFCQIVLSACTKVEFF---------------EFGKQLHGLVLKQGFSSETYVCN 290
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+ +Y+R + A +F + ++ VS+N+LI+G A++ +AL F +M + +P
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +S+ +A AS G+L GK H++ IK+G V +L+D+Y K I+ A + F
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 410
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ D ++ + + F +M GI PNQ T+ +L C+ G D
Sbjct: 411 LCYGQLDNLN---------------KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATD 455
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ + K G + +D+ + G LD ALK R + E W A++
Sbjct: 456 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGY 514
Query: 374 RMH 376
H
Sbjct: 515 TQH 517
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 234/506 (46%), Gaps = 54/506 (10%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++ Y G L+ A +FDEMP++ + W + + + LF +ML ++ +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+ + VL+ A +F Q+HA + G++ + ++ + L+D+Y + + A +F
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
L++++ VSW A+I+G ++ E+A+ F ++ V +A E
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
GK +H V+K G +V N LV +Y++SG++ AE++F+ + +RD VS+NS+++G A
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
Q G + F+KM + P+ VT +L+AC+ G L G+ + + K G+ +
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388
Query: 333 HYVTFVDL----------------LGRAGLLDRALKFIREMPIE---PTAAVWGALLGAC 373
+ +DL G+ L+++ + +M IE P + ++L C
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTC 448
Query: 374 RMHKNVELGAYAAERI----FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
+LG ++ F+ + + S +L ++YA G+L+ A + + +KE+ V
Sbjct: 449 TTLGATDLGEQIHTQVLKTGFQFNVYVSS---VLIDMYAKHGKLDHALKIFRRLKENDV- 504
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS-----HVLS 484
SW A+ D + + K+ ++ K IG+ S L
Sbjct: 505 ----VSWT----AMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALD 556
Query: 485 YADQQEREAKLQVHSEKLALAFALIS 510
Q ++ L +S+ L++ AL+S
Sbjct: 557 QGRQIHAQSCLSGYSDDLSIGNALVS 582
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 33/271 (12%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
Y G L+D Y F ++ A +F + ++ WN + + + F ML +
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157
Query: 190 GFEPTHFSYSSVFTALASTG-SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
E ++ V + S + +HA I SG + F+ N L+D+Y K+G +
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHG-------------LGKAT-VRWFE-------KM 287
A+KVF L RD VSW +M++G +Q+G L T V +FE +
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLV 277
Query: 288 LRNGIAPNQVTFLC--VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
L+ G + T++C ++T S +G L + F M + + Y + + L + G
Sbjct: 278 LKQGFSSE--TYVCNALVTLYSRSGNLSSAEQIFHCMSQR----DRVSYNSLISGLAQQG 331
Query: 346 LLDRALKFIREMPIE---PTAAVWGALLGAC 373
++RAL ++M ++ P +LL AC
Sbjct: 332 YINRALALFKKMNLDCQKPDCVTVASLLSAC 362
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/617 (38%), Positives = 357/617 (57%), Gaps = 53/617 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-- 59
C LK + + + VH + + + D+ + N +++AYAKCG ++ A K+F+ M KD+V
Sbjct: 275 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 334
Query: 60 ---------------------------------TWTALISGYSQNDQPENAIILFSQMLR 86
TWTA+I+GYSQ A+ LF QM+
Sbjct: 335 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 394
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY----------GYDWNVYVGSSLL 136
G PN T+ SVL A + + G ++HA+ LK G D ++ V ++L+
Sbjct: 395 SGSLPNCVTIISVLSACASLGAFSQ-GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453
Query: 137 DMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE--GFE 192
DMY++ A +F LE +N V+W +I GHA+ + AL+ F EM+ E G
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDAE 250
P ++ S + A A ++ GK +HA+V++ FV N L+DMY+K G ++ A
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 573
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF+ + ++ +SW SM+TG HG G + F+KM + G P+ +TFL VL ACSH G
Sbjct: 574 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 633
Query: 311 LLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
++D+G YF M +G+ P HY +DLL R+G LD+A + +++MP+EPTA VW AL
Sbjct: 634 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVAL 693
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L ACR+H NVEL +A ++ E++ + G + L++NIYA+AGR D AR R +MK+SG+K
Sbjct: 694 LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 753
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
K P CSWV+ + F D +HP I+ + ++IK +GYVP+++ L D++
Sbjct: 754 KRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEE 813
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+ L HSEKLALA+ L++T PG I I KN+RVCGDCHSAF + SK+V+ EI+VRD
Sbjct: 814 EKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDP 873
Query: 550 NRFHHFRDGFCSCGDYW 566
+RFHHF++G CSCG YW
Sbjct: 874 SRFHHFKNGSCSCGGYW 890
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 211/435 (48%), Gaps = 62/435 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C L + H I + F++++ + N ++ Y++CG L+EA +FDE+ + D+
Sbjct: 165 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 224
Query: 59 VTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQ-----FTLSSVLKASGAGATDDKF 112
++W +++S + ++ A+ LFS+M L + KP ++ ++L A G+ +
Sbjct: 225 ISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQ- 283
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
++VH ++ G +V+VG++L+D YA+ M++A +F +E K+ VSWNA++AG+++
Sbjct: 284 TKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQ 343
Query: 173 KSEGE-----------------------------------KALRTFSEMLREGFEPTHFS 197
E +AL F +M+ G P +
Sbjct: 344 SGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVT 403
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKS----------GGQLVAFVGNTLVDMYAKSGSIE 247
SV +A AS G+ QG +HA+ +K+ G V N L+DMY+K S +
Sbjct: 404 IISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFK 463
Query: 248 DAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLCVL 303
A +F+ L +R+VV+W M+ G AQ+G ++ F +M+ G+APN T C+L
Sbjct: 464 AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCIL 523
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEP 361
AC+H + G+ A + +H A++V +D+ + G +D A M +
Sbjct: 524 MACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QK 582
Query: 362 TAAVWGALLGACRMH 376
+A W +++ MH
Sbjct: 583 SAISWTSMMTGYGMH 597
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 255/592 (43%), Gaps = 114/592 (19%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F + ++ ++ +Y CG D A + + + V W LI + + + ++AI +
Sbjct: 85 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+MLR G +P+ FTL VLKA G + G H G++ NV++ ++L+ MY+R
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGE-LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 203
Query: 143 DQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-PTH--- 195
+++A +F + + + +SWN++++ H + S AL FS+M E PT+
Sbjct: 204 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 263
Query: 196 --FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S ++ A S ++ Q K VH + I++G FVGN L+D YAK G +E+A KVF
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKA----------------TVRW-------------- 283
N + +DVVSWN+M+ G +Q G +A V W
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383
Query: 284 -----FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH---------GVEP 329
F +M+ +G PN VT + VL+AC+ G +G A K+ G E
Sbjct: 384 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 443
Query: 330 EEAH-YVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMHKNVELGAYAAE 387
E+ Y +D+ + A ++P+E V W ++G H A +
Sbjct: 444 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSNDALK 500
Query: 388 RIFEL--DPHDSGPH------ILLANIYASAGRLNDAARA---RKMMKESG--------V 428
E+ +P+ P+ IL+A + +A R+ A R ES +
Sbjct: 501 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 560
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMI-----------HKKWRE---ISEKIKQIG 474
C V+T A H+F D+ Q++ I H + E I +K+++ G
Sbjct: 561 DMYSKCGDVDT--ARHVF----DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 614
Query: 475 YVPDS----------SHV------LSYADQQEREAKLQVHSEKLALAFALIS 510
+VPD SH LSY D + L +E A A L++
Sbjct: 615 FVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLA 666
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/597 (40%), Positives = 348/597 (58%), Gaps = 33/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA--------------- 46
C L + +H+ I+ S +D + N +LN Y+KCG LD A
Sbjct: 62 CISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSC 121
Query: 47 ----------------RKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
RK+FDEMP +++ TW A+++G Q + E + LFS+M LG
Sbjct: 122 NILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFL 181
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++F L SVL+ AG GRQVH + K G+++N+ V SSL MY + + +
Sbjct: 182 PDEFALGSVLRGC-AGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGER 240
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
L A+ S+N V+WN LIAG A+ E+ L ++ M GF P ++ SV ++ + +
Sbjct: 241 LIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELAT 300
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L QG+ +HA VIK+G L+ V ++L+ MY++ G +E + KVF DVV W+SM+
Sbjct: 301 LGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAA 360
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEP 329
HG G + F +M + + N VTFL +L ACSH GL ++G +F LM +K+GV+P
Sbjct: 361 YGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKP 420
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VDLLGR G ++ A IR MP++ W LL AC++HK E+ +E +
Sbjct: 421 RLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEV 480
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
F LDP D P++LL+NI+AS R +D + RK M++ +KKEP SW+E KN +H F
Sbjct: 481 FRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMG 540
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HP+ I RE++ ++K+ GYVPD VL D +++E L HSEKLA+AFAL+
Sbjct: 541 DKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALL 600
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TP G+ I + KN+RVC DCH A K+ S++ REIIVRD++RFHHF++G CSCGDYW
Sbjct: 601 YTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/572 (39%), Positives = 358/572 (62%), Gaps = 11/572 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +H++ + ++++ + N +++ YA+ G L + +K+FD M V+D+++W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISW 316
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL---SSVLKASGAGATDDKFGRQVHA 118
++I Y N+QP AI+LF +M ++P+ TL +S+L G + + R V
Sbjct: 317 NSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG----EIRACRSVQG 372
Query: 119 FCLKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
F L+ G+ ++ +G++++ MYA+ +D A +F L +K+ +SWN +I+G+A+
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFAS 432
Query: 178 KALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+A+ ++ M EG E ++ SV A + G+L QG +H ++K+G L FVG +
Sbjct: 433 EAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTS 492
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L DMY K G ++DA +F ++ + + V WN+++ HG G+ V F++ML G+ P+
Sbjct: 493 LADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 552
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+TF+ +L+ACSH+GL+DEG+ F +M+ +G+ P HY VDL GRAG L+ AL FI
Sbjct: 553 HITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFI 612
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
+ MP++P A++WGALL ACR+H NV+LG A+E +FE++P G H+LL+N+YASAG+
Sbjct: 613 KSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWE 672
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
R + G++K P S +E N V +F + HP ++++ + EK+K +G
Sbjct: 673 GVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVG 732
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD VL + E+E L HSE+LA+AFALI+TP +TI I KN+RVCGDCHS K
Sbjct: 733 YVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTK 792
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SK+ EREIIVRD+NRFHHF++G CSCGDYW
Sbjct: 793 FISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 212/454 (46%), Gaps = 50/454 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT+L+ A+ +HA ++ S ++ + ++N Y G + AR FD + +D+ W
Sbjct: 64 CTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAW 120
Query: 62 TALISGYSQNDQPENAIILFSQ-MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ISGY + I FS ML GL+P+ T SVLKA TD G ++H
Sbjct: 121 NLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC-RNVTD---GNKIHCLA 176
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK+G+ W+VYV +SL+ +Y R+ + +A LF + +++ SWNA+I+G+ + ++AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL 236
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
T S+ LR T S+ +A G +G +H++ IK G + FV N L+D+Y
Sbjct: 237 -TLSDGLRAMDSVT---VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ GS++D +KVF+R+ RD++SWNS++ + + F++M + I P+ +T +
Sbjct: 293 AEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLI 352
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL-GRAGLLDRALKFIREMP- 358
+ + S G + + + G E+ V ++ + GL+D A +P
Sbjct: 353 SLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 359 -----------------------------------IEPTAAVWGALLGACRMHKNVELGA 383
I W ++L AC + G
Sbjct: 413 KDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGM 472
Query: 384 YAAERIFELDPH-DSGPHILLANIYASAGRLNDA 416
R+ + + D LA++Y GRL+DA
Sbjct: 473 KLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDA 506
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
V T +L+ K +HA ++ S + LV++Y G++ A F+ + RD
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRD 116
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEK-MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
V +WN M++G + G +R F ML +G+ P+ TF VL AC + + +G
Sbjct: 117 VYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIH 173
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACR 374
L K G + + + L R G + A EMP + W A++ G C+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS-WNAMISGYCQ 228
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/618 (39%), Positives = 358/618 (57%), Gaps = 55/618 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-- 59
C LK + + + VH + + + D+ + N +++AYAKCG ++ A K+F+ M KD+V
Sbjct: 282 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 341
Query: 60 ---------------------------------TWTALISGYSQNDQPENAIILFSQMLR 86
TWTA+I+GYSQ A+ LF QM+
Sbjct: 342 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 401
Query: 87 LGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKY----------GYDWNVYVGSSL 135
G PN T+ SVL A + GA G ++HA+ LK G D ++ V ++L
Sbjct: 402 SGSLPNCVTIISVLSACASLGAFSQ--GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 459
Query: 136 LDMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE--GF 191
+DMY++ A +F LE +N V+W +I GHA+ + AL+ F EM+ E G
Sbjct: 460 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 519
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDA 249
P ++ S + A A ++ GK +HA+V++ FV N L+DMY+K G ++ A
Sbjct: 520 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTA 579
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF+ + ++ +SW SM+TG HG G + F+KM + G P+ +TFL VL ACSH
Sbjct: 580 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 639
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G++D+G YF M +G+ P HY +DLL R+G LD+A + +++MP+EPTA VW A
Sbjct: 640 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 699
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL ACR+H NVEL +A ++ E++ + G + L++NIYA+AGR D AR R +MK+SG+
Sbjct: 700 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 759
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK P CSWV+ + F D +HP I+ + ++IK +GYVP+++ L D+
Sbjct: 760 KKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDE 819
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+E+ L HSEKLALA+ L++T PG I I KN+RVCGDCHSAF + SK+V+ EI+VRD
Sbjct: 820 EEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRD 879
Query: 549 TNRFHHFRDGFCSCGDYW 566
+RFHHF++G CSCG YW
Sbjct: 880 PSRFHHFKNGSCSCGGYW 897
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 211/435 (48%), Gaps = 62/435 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C L + H I + F++++ + N ++ Y++CG L+EA +FDE+ + D+
Sbjct: 172 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 231
Query: 59 VTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQ-----FTLSSVLKASGAGATDDKF 112
++W +++S + ++ A+ LFS+M L + KP ++ ++L A G+ +
Sbjct: 232 ISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQ- 290
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
++VH ++ G +V+VG++L+D YA+ M++A +F +E K+ VSWNA++AG+++
Sbjct: 291 TKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQ 350
Query: 173 KSEGE-----------------------------------KALRTFSEMLREGFEPTHFS 197
E +AL F +M+ G P +
Sbjct: 351 SGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVT 410
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKS----------GGQLVAFVGNTLVDMYAKSGSIE 247
SV +A AS G+ QG +HA+ +K+ G V N L+DMY+K S +
Sbjct: 411 IISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFK 470
Query: 248 DAEKVFNR--LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLCVL 303
A +F+ L +R+VV+W M+ G AQ+G ++ F +M+ G+APN T C+L
Sbjct: 471 AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCIL 530
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEP 361
AC+H + G+ A + +H A++V +D+ + G +D A M +
Sbjct: 531 MACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QK 589
Query: 362 TAAVWGALLGACRMH 376
+A W +++ MH
Sbjct: 590 SAISWTSMMTGYGMH 604
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 255/592 (43%), Gaps = 114/592 (19%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F + ++ ++ +Y CG D A + + + V W LI + + + ++AI +
Sbjct: 92 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+MLR G +P+ FTL VLKA G + G H G++ NV++ ++L+ MY+R
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGE-LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 210
Query: 143 DQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-PTH--- 195
+++A +F + + + +SWN++++ H + S AL FS+M E PT+
Sbjct: 211 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 270
Query: 196 --FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S ++ A S ++ Q K VH + I++G FVGN L+D YAK G +E+A KVF
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKA----------------TVRW-------------- 283
N + +DVVSWN+M+ G +Q G +A V W
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390
Query: 284 -----FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH---------GVEP 329
F +M+ +G PN VT + VL+AC+ G +G A K+ G E
Sbjct: 391 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 450
Query: 330 EEAH-YVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMHKNVELGAYAAE 387
E+ Y +D+ + A ++P+E V W ++G H A +
Sbjct: 451 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG---HAQYGDSNDALK 507
Query: 388 RIFEL--DPHDSGPH------ILLANIYASAGRLNDAARA---RKMMKESG--------V 428
E+ +P+ P+ IL+A + +A R+ A R ES +
Sbjct: 508 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 567
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMI-----------HKKWRE---ISEKIKQIG 474
C V+T A H+F D+ Q++ I H + E I +K+++ G
Sbjct: 568 DMYSKCGDVDT--ARHVF----DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 621
Query: 475 YVPDS----------SHV------LSYADQQEREAKLQVHSEKLALAFALIS 510
+VPD SH LSY D + L +E A A L++
Sbjct: 622 FVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLA 673
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 350/571 (61%), Gaps = 37/571 (6%)
Query: 32 TILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKP 91
T++ Y + G L AR++ D M + + W A+ISGY + E+A+ LF +M LG++
Sbjct: 228 TLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQV 287
Query: 92 NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY----DWNVYVGSSLLDMYARFDQMDD 147
++ T +SV+ A G G+QVHA+ LK D+ + VG++L+ +Y ++ ++D
Sbjct: 288 DESTYTSVISACADGGFF-LLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDG 346
Query: 148 AWFLFTALESKNEVSWNALIAGH-------------------------------ARKSEG 176
A +F + K+ ++WN L++G+ A+ G
Sbjct: 347 ARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFG 406
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+AL+ F++M +G+EP ++++ TA + G+LE G+ +HA ++ G VGN +
Sbjct: 407 EQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAM 466
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MYA+ G +E A +F + D VSWNSM+ QHG G + +E+ML+ GI P++
Sbjct: 467 ITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDR 526
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
TFL VL+ACSHAGL++EG YF ++++ +G+ P E HY +DL RAG A I
Sbjct: 527 RTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVID 586
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MP E A +W ALL CR H N++LG AAE++F+L P G ++LL+N+YAS GR ND
Sbjct: 587 SMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWND 646
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
AR RK+M++ GVKKEPACSW E +N VH+F+ +D HP+ I+ +++ ++K+IGY
Sbjct: 647 VARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGY 706
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+PD+ +VL + + +E L HSEKLA+AF L+ P G+T+ + KN+R+CGDCH+A KF
Sbjct: 707 IPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKF 766
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SKVV REI+VRD RFHHF++G CSC +YW
Sbjct: 767 MSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 210/491 (42%), Gaps = 115/491 (23%)
Query: 4 HLKKLKEARIVHAHILGSAFK-------------------------------NDIAMQNT 32
+L AR VH H++ S FK D+ + T
Sbjct: 25 NLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTT 84
Query: 33 ILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
++ AY+ G L AR++F+E P+ +D V + A+I+GYS + +AI LF M +
Sbjct: 85 LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQ 144
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P+ FT +SVL AS D++ Q+H +K+G + V ++LL +Y +
Sbjct: 145 PDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSS 204
Query: 142 FDQMDDAWFLFTALESKNE-------------------------------VSWNALIAGH 170
M A LF + +NE ++WNA+I+G+
Sbjct: 205 SSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGY 264
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GG 226
E AL F +M G + +Y+SV +A A G GK VHA+++K+
Sbjct: 265 LHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDR 324
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS-------------------- 266
+ VGNTL+ +Y K G ++ A K+F + +D+++WN+
Sbjct: 325 DFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQ 384
Query: 267 -----------MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
M++G AQ+G G+ ++ F +M +G PN F +TACS G L+ G
Sbjct: 385 MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG 444
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP-IEPTAAVWGALLGACR 374
+ A + G + + + + R G+++ A MP ++P + W +++ A
Sbjct: 445 RQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVS--WNSMIAALG 502
Query: 375 MH----KNVEL 381
H K +EL
Sbjct: 503 QHGHGVKAIEL 513
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 165/314 (52%), Gaps = 14/314 (4%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DI NT+L+ Y G ++EA+ F +MP K+++TWT +ISG +QN E A+ LF+QM
Sbjct: 358 DIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMK 417
Query: 86 RLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
G +PN + + + A S GA ++ GRQ+HA + G+D + VG++++ MYAR
Sbjct: 418 LDGYEPNDYAFAGAITACSVLGALEN--GRQLHAQIVHLGHDSTLSVGNAMITMYARCGI 475
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++ A +F + + VSWN++IA + G KA+ + +ML+EG P ++ +V +A
Sbjct: 476 VEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSA 535
Query: 205 LASTGSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LK 258
+ G +E+G + + I G A ++D++ ++G DA+ V + + +
Sbjct: 536 CSHAGLVEEGNRYFNSMLENYGIAPGEDHYA----RMIDLFCRAGKFSDAKNVIDSMPFE 591
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
W ++L GC HG + EK+ + I + T++ + + G ++
Sbjct: 592 ARAPIWEALLAGCRTHGNMDLGIEAAEKLFKL-IPQHDGTYVLLSNMYASLGRWNDVART 650
Query: 319 FALMKKHGVEPEEA 332
LM+ GV+ E A
Sbjct: 651 RKLMRDRGVKKEPA 664
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HA I+ + +++ N ++ YA+CG ++ AR +F MP D V+W
Sbjct: 435 CSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSW 494
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Q+ AI L+ QML+ G+ P++ T +VL A ++ R ++
Sbjct: 495 NSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAG 169
YG + ++D++ R + DA + ++ E++ + W AL+AG
Sbjct: 555 NYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPI-WEALLAG 603
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 347/566 (61%), Gaps = 1/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++ + L E++IVHA I+ + F + + + N ++ Y K G + EA+K+ MP D VTW
Sbjct: 1159 CSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTW 1218
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G+++N++P A+ + + G+ N T+ SVL A A K G +HA +
Sbjct: 1219 NALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIV 1278
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ + YV +SL+ MYA+ ++ + ++F L +K+ ++WNA++A +A GE+AL+
Sbjct: 1279 LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALK 1338
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G FS+S A A+ LE+G+ +H VIK G + V N +DMY
Sbjct: 1339 IFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 1398
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + D K+ + + R +SWN +++ A+HG + F +ML+ G P+ VTF+
Sbjct: 1399 KCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVS 1458
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+AC+H GL+DEG Y+ ++ ++ GV P H V +DLLGR+G L A FI+EMP+
Sbjct: 1459 LLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVP 1518
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P W +LL ACR+H N+EL AE + ELDP D ++L +N+ A++G+ D R
Sbjct: 1519 PNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLR 1578
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M + +KK+PACSWV+ K+ VH F + HPQ + I K E+ + K+ GYVPD+S
Sbjct: 1579 KEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTS 1638
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D++++E L HSE+LALAF LI+TP ST+ I KN+RVCGDCHS +KF S +V
Sbjct: 1639 FALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIV 1698
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+I++RD RFHHF G CSCGDYW
Sbjct: 1699 GRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 246/448 (54%), Gaps = 4/448 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+ L V I F ++ +++ +++ ++KCG +++A LF M +D+V+W
Sbjct: 141 CTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I GY+ +++ +F MLR GL P+ +TL SVL+AS G Q+H
Sbjct: 201 NAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGG-GLIIANQIHGIIT 259
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS-EGEKAL 180
+ GY V L++ YA+ + A L + K+ S ALI G+A + AL
Sbjct: 260 QLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDAL 319
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM + S+ A+ S G +HA +K +GN L+DMY
Sbjct: 320 DLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMY 379
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSG IEDA++ F+ + +++V+SW S+++G A+HG G V ++KM G PN VTFL
Sbjct: 380 AKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFL 439
Query: 301 CVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSH GL EG + + ++ K+ ++P HY VDL R GLL+ A + ++ I
Sbjct: 440 SLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDI 499
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+ A++WGA+LGA ++ + LG AA +F + P +S +++LA+IY++AG +DA +
Sbjct: 500 KHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKI 559
Query: 420 RKMMKESGVKKEPACSWVE-TKNAVHMF 446
RK+M+E KK S+ + TK ++ +
Sbjct: 560 RKLMEERSTKKNAGYSFFQATKKSIPLL 587
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 192/376 (51%), Gaps = 3/376 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K K+ ++H H++ + F +D+ + ++ Y K G + AR +FD MP + +V+W
Sbjct: 40 CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSW 99
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++SGYSQN + E A +LFS M G+K NQFT S L+A + D G QV
Sbjct: 100 TAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLD-MGIQVQGCIQ 158
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + N++V S+L+D +++ +M+DA +LF + ++ VSWNA+I G+A + + +
Sbjct: 159 KGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFC 218
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F MLR G P ++ SV A A G L +H + + G V L++ YA
Sbjct: 219 MFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYA 278
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA-TVRWFEKMLRNGIAPNQVTFL 300
K+GS+ A+ + +LK+D+ S +++TG A G+ + F++M + I + V
Sbjct: 279 KNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILC 338
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C++ G A K+ + A +D+ ++G ++ A + EM E
Sbjct: 339 SMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEME-E 397
Query: 361 PTAAVWGALLGACRMH 376
W +L+ H
Sbjct: 398 KNVISWTSLISGYAKH 413
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 192/359 (53%), Gaps = 2/359 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH ++ + D+ + +++ Y G + A+KLF+EMP ++V+WT+L+ GYS +
Sbjct: 868 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 927
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P + ++ +M + G+ NQ T ++V + G D G QV ++YG++ +V V +
Sbjct: 928 PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL-LEDQVLGYQVLGHIIQYGFEDSVSVAN 986
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ M++ F +++A ++F + + +SWNA+I+ +A ++LR F M E
Sbjct: 987 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 1046
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ + +S +L+ G+ +H V+K G + NTL+ +Y+++G EDAE VF
Sbjct: 1047 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 1106
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +RD++SWNSM+ Q G ++ ++L+ G N VTF L ACS+ L
Sbjct: 1107 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 1166
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + AL+ G V + G+ G++ A K ++ MP +P W AL+G
Sbjct: 1167 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 213/427 (49%), Gaps = 9/427 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
LK R +H ++ +++ + NT+L Y++ G ++A +F M +D+++W ++++
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Y Q+ + + + + +++L++G N T +S L A + + VHA + G+
Sbjct: 1123 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-SKIVHALIIVAGFH 1181
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ VG++L+ MY + M +A + + + V+WNALI GHA E +A++ + +
Sbjct: 1182 DFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLI 1241
Query: 187 LREGFEPTHFSYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+G + + SV A ++ L+ G +HAH++ +G + +V N+L+ MYAK G
Sbjct: 1242 REKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGD 1301
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ + +F+ L + ++WN+M+ A HG G+ ++ F +M G+ +Q +F L A
Sbjct: 1302 LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAA 1361
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
++ +L+EGQ L+ K G E + +D+ G+ G + LK + + PI +
Sbjct: 1362 TANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLS 1420
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA--GRLNDAARA--RK 421
W L+ A H + + +L P H+ ++ ++ G L D A
Sbjct: 1421 WNILISAFARHGCFQKARETFHEMLKLGPKPD--HVTFVSLLSACNHGGLVDEGLAYYDS 1478
Query: 422 MMKESGV 428
M +E GV
Sbjct: 1479 MTREFGV 1485
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 192/367 (52%), Gaps = 10/367 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ +HA + + I NT++N Y+K G ++ AR +FDEM ++ +W+ ++SGY +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
E A+ LF QM LG++PN F ++S++ A S +G D+ G QVH F +K G +V
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDV 881
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
YVG++L+ Y + +A LF + N VSW +L+ G++ + L + M +E
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 941
Query: 190 GFEPTHFSYSSVFTALASTGSLEQ---GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G ++++V +S G LE G V H+I+ G + V N+L+ M++ S+
Sbjct: 942 GVSGNQNTFATV---TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSV 998
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E+A VF+ + + D++SWN+M++ A HGL + ++R F M N T +L+ C
Sbjct: 999 EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 1058
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
S L G+G L+ K G++ T + L AG + A + + + E W
Sbjct: 1059 SSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA-ELVFQAMTERDLISW 1117
Query: 367 GALLGAC 373
+++ AC
Sbjct: 1118 NSMM-AC 1123
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 189/364 (51%), Gaps = 3/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V HI+ F++ +++ N++++ ++ ++EA +FD M D+++W A+IS Y+ +
Sbjct: 969 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 1028
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++ F M L + N T S L + + + K+GR +H +K G D NV + +
Sbjct: 1029 CRESLRCFHWMRHLHNETNS-TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 1087
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LL +Y+ + +DA +F A+ ++ +SWN+++A + + + L+ +E+L+ G
Sbjct: 1088 TLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM 1147
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
H +++S A ++ L + K VHA +I +G VGN LV MY K G + +A+KV
Sbjct: 1148 NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL 1207
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA-GLL 312
+ + D V+WN+++ G A++ V+ ++ + GI N +T + VL ACS LL
Sbjct: 1208 QTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLL 1267
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G A + G E ++ + + + + G L+ + +I + + W A++ A
Sbjct: 1268 KHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSS-NYIFDGLGNKSPITWNAMVAA 1326
Query: 373 CRMH 376
H
Sbjct: 1327 NAHH 1330
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
T G+ +HAFC+ + ++ ++L++MY++F ++ A ++F + +NE SW+ ++
Sbjct: 758 TSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTML 817
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL-EQGKWVHAHVIKSGG 226
+G+ R E+A+ F +M G EP F +S+ TA + +G + ++G VH V+K+G
Sbjct: 818 SGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGI 877
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+VG LV Y G + +A+K+F + +VVSW S++ G + G + +++
Sbjct: 878 LGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQR 937
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLL-DEGQGYFAL--MKKHGVEPEEAHYVTFVDLLGR 343
M + G++ NQ TF V ++C GLL D+ GY L + ++G E + + + +
Sbjct: 938 MRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 994
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++ A M E W A++ A H
Sbjct: 995 FSSVEEACYVFDHMN-ECDIISWNAMISAYAHH 1026
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/566 (41%), Positives = 350/566 (61%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ +H ++ F D+ ++ +++ YAKCG L++A K+FD++P K++V+W
Sbjct: 122 CARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSW 181
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY + AI +F ++L + L P+ FT+ VL A D G +H +
Sbjct: 182 TAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSAC-TQLGDLNSGEWIHKCIM 240
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G NV+VG+SL+DMYA+ M+ A +F + K+ VSW A+I G+A ++A+
Sbjct: 241 EMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 300
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M RE +P ++ V +A A G+LE G+WV V ++ +G L+D+YA
Sbjct: 301 LFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYA 360
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A +VF + ++D V WN++++G A +G K + F ++ + GI P+ TF+
Sbjct: 361 KCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIG 420
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C+HAGL+DEG+ YF M + + P HY VDLLGRAGLLD A + IR MP+E
Sbjct: 421 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VWGALLGACR+H++ +L A +++ EL+P +SG ++LL+NIY++ + ++AA+ R
Sbjct: 481 ANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVR 540
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
M E ++K P CSW+E VH F+ D HP I+ K E+++K+K GYVP +
Sbjct: 541 LSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTD 600
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++E+E L HSEKLA+AF LIS P + I + KN+RVCGDCH A K S +
Sbjct: 601 FVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSIT 660
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI VRD NRFH FR+G CSC DYW
Sbjct: 661 GREITVRDNNRFHCFREGSCSCNDYW 686
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)
Query: 30 QNTILNAYAKCGC----LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
N +LN +C + R LF ++ ++ W +I G ND ++AI + M
Sbjct: 45 DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G PN FT VLKA A D + G ++H +K G+D +V+V +SL+ +YA+ +
Sbjct: 105 SEGFLPNNFTFPFVLKAC-ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYL 163
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+DA +F + KN VSW A+I+G+ + +A+ F +L P F+ V +A
Sbjct: 164 EDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSAC 223
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G L G+W+H +++ G FVG +LVDMYAK G++E A VF+ + ++D+VSW
Sbjct: 224 TQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWG 283
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G A +GL K + F +M R + P+ T + VL+AC+ G L+ G+ L+ ++
Sbjct: 284 AMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRN 343
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+DL + G + RA + + M E VW A++ M+ V++
Sbjct: 344 EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKI 398
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/561 (41%), Positives = 345/561 (61%), Gaps = 11/561 (1%)
Query: 8 LKEARIVHAHILGSAFK-NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+K+ +IV A + K D+ NTI+ YA+ G +DEAR+LFDE PV D+ TWTA++S
Sbjct: 225 VKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVS 284
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY QN E A LF +M + N+ + +++L G + +
Sbjct: 285 GYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVST 340
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN +++ YA+ ++ +A LF + ++ VSW A+IAG+++ +ALR F M
Sbjct: 341 WN-----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLM 395
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
REG S+SS + A +LE GK +H ++K G + FVGN L+ MY K GSI
Sbjct: 396 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 455
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E+A +F + +D+VSWN+M+ G ++HG G+ +R+FE M R G+ P+ T + VL+AC
Sbjct: 456 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSAC 515
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH GL+D+G+ YF M + +GV P HY VDLLGRAGLL+ A ++ MP EP AA+
Sbjct: 516 SHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAI 575
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WG LLGA R+H N EL AA++IF ++P +SG ++LL+N+YAS+GR D + R M++
Sbjct: 576 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 635
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK P SW+E +N H F D+ HP++ I ++ ++K+ GYV +S VL
Sbjct: 636 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHD 695
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E ++ HSE+LA+A+ ++ G I + KN+RVC DCH+A K+ +KV R II
Sbjct: 696 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLII 755
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD NRFHHF+DG CSCGDYW
Sbjct: 756 LRDNNRFHHFKDGSCSCGDYW 776
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 187/437 (42%), Gaps = 55/437 (12%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ NTIL+ YA+ GC+D+AR++FD MP K+ V+W AL+S Y QN + E A +LF
Sbjct: 149 ERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS 208
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
L L +K F + ++ WN +++ YA+
Sbjct: 209 RENWALVSWNCLLGGFVKKKKIVEARQFF----DSMKVRDVVSWN-----TIITGYAQNG 259
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++D+A LF + +W A+++G+ + E+A F M E S++++
Sbjct: 260 EIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLA 315
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+E K + NT++ YA+ G I +A+ +F+++ KRD VS
Sbjct: 316 GYVQGERVEMAK----ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 371
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +M+ G +Q G +R F M R G N+ +F L+ C+ L+ G+ +
Sbjct: 372 WAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 431
Query: 324 KHGVEP------------------EEAH-------------YVTFVDLLGRAGLLDRALK 352
K G E EEA+ + T + R G + AL+
Sbjct: 432 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALR 491
Query: 353 FIREMP---IEPTAAVWGALLGACRMHKNVELGA---YAAERIFELDPHDSGPHILLANI 406
F M ++P A A+L AC V+ G + + + + P +S + + ++
Sbjct: 492 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRP-NSQHYACMVDL 550
Query: 407 YASAGRLNDAARARKMM 423
AG L +A K M
Sbjct: 551 LGRAGLLEEAHNLMKNM 567
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 170/376 (45%), Gaps = 34/376 (9%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+DI N +++Y + G EA ++F MP V++ A+ISGY +N + E A +LF +M
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA-FCLKYGYDWNVYVGSSLLDMYARFD 143
L + ++ G + F R C WN ++L YA+
Sbjct: 117 PERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC-----SWN-----TILSGYAQNG 166
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+DDA +F + KN+VSWNAL++ + + S+ E+A F RE + S++ +
Sbjct: 167 CVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS--RENW--ALVSWNCLL- 221
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
G +++ K V A ++ V NT++ YA++G I++A ++F+ DV
Sbjct: 222 ----GGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVF 277
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
+W +M++G Q+ + + F++M N+V++ +L ++ + F +M
Sbjct: 278 TWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVM 333
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
V + + T + + G + A +MP + W A++ +
Sbjct: 334 PCRNV----STWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAGYSQSGH---- 384
Query: 383 AYAAERIFELDPHDSG 398
+Y A R+F L + G
Sbjct: 385 SYEALRLFVLMEREGG 400
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + +H ++ ++ + N +L Y KCG ++EA LF EM KD+V+W
Sbjct: 414 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 473
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GYS++ E A+ F M R GLKP+ T+ +VL A DK + H
Sbjct: 474 NTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQ 533
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG N + ++D+ R +++A
Sbjct: 534 DYGVRPNSQHYACMVDLLGRAGLLEEA 560
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 357/566 (63%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + EA+ H + + D+ + N ++NAY+KCG ++ AR++FD M + +V+W
Sbjct: 73 CARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSW 132
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I Y++N A+ +F +M G K ++FT+SSVL A GA D +++H +
Sbjct: 133 NTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANC-DALECKKLHCLSM 191
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D N+YVG++LLD+YA+ ++DA +F +++ K+ V+W++++AG+ + E+AL
Sbjct: 192 KTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALL 251
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ R E F+ SSV A ++ +L +GK +HA + KSG FV ++ VDMYA
Sbjct: 252 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYA 311
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ ++ +F+ + ++++ WN++++G A+H K + FEKM ++G+ PN+VTF
Sbjct: 312 KCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 371
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ C H GL++EG+ +F LM+ +G+ P HY VD+LGRAGLL A + I+ +P E
Sbjct: 372 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFE 431
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA++WG+LL +CR+ KN+EL AA+++FEL+P ++G H+LL+NIYA+ + + A++R
Sbjct: 432 PTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSR 491
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K++++ VKK SW++ K+ VH+F + +HP+ I + ++++ GY P
Sbjct: 492 KLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVE 551
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
H L + ++E L HSEKLAL F L+ P GST+ I KN+R+C DCH K AS
Sbjct: 552 HELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMAT 611
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHF DG CSCG++W
Sbjct: 612 RRFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 18/248 (7%)
Query: 150 FLFTALESKNEVSWNA-------LIAGHARKSEGEKALRTFSEMLREGFEPTHFS----- 197
L +L SKN + + A ++ + S + + F+ +E P +S
Sbjct: 1 MLSLSLPSKNILGFTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNV 60
Query: 198 -----YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+ + A G++ + K H ++ Q + N L++ Y+K G +E A +V
Sbjct: 61 VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ +L+R +VSWN+M+ ++ + + F +M G ++ T VL+AC
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDA 180
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + L K ++ +DL + G+++ A++ M + ++ W +++
Sbjct: 181 LECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ-DKSSVTWSSMVAG 239
Query: 373 CRMHKNVE 380
KN E
Sbjct: 240 YVQSKNYE 247
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/565 (40%), Positives = 345/565 (61%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L + I+H I+ F +D+ +QN ++ YAKCG + A+ +FD + + +V+W
Sbjct: 164 CTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSW 223
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGY+QN + A+ +FSQM G+KP+ L S+L+A D + GR +H F +
Sbjct: 224 TSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAY-TDVDDLEQGRSIHGFVI 282
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SL YA+ + A F +++ N + WNA+I+G+A+ E+A+
Sbjct: 283 KMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVN 342
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M+ +P + S A A GSLE +W+ +V KS FV +L+DMYA
Sbjct: 343 LFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYA 402
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E A +VF+R +DVV W++M+ G HG G + + M + G+ PN VTF+
Sbjct: 403 KCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIG 462
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTAC+H+GL+ EG F MK + P HY VDLLGRAG L A FI ++PIEP
Sbjct: 463 LLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEP 522
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+VWGALL AC++++ V LG YAA ++F LDP+++G ++ L+N+YAS+ + A R
Sbjct: 523 GVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRV 582
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M+E G+ K+ S +E + F D +HP I + + + ++K++G+VP +
Sbjct: 583 LMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTES 642
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL + +E+E L HSE++A+A+ LIST PG+T+ I KN+R C +CHSA K SK+VE
Sbjct: 643 VLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVE 702
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHHF+DG CSCGDYW
Sbjct: 703 REIIVRDANRFHHFKDGLCSCGDYW 727
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 185/374 (49%), Gaps = 5/374 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
TH + L + +H ++ S +++ + ++N + G + ARKLFDE D+ W
Sbjct: 67 THKRHLDQ---IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWN 123
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I YS+N+ + + ++ M G+ P+ FT VLKA D +H +K
Sbjct: 124 AIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKAC-TELLDFGLSCIIHGQIIK 182
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
YG+ +V+V + L+ +YA+ + A +F L + VSW ++I+G+A+ + +ALR
Sbjct: 183 YGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRM 242
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
FS+M G +P + S+ A LEQG+ +H VIK G + + +L YAK
Sbjct: 243 FSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAK 302
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G + A+ F+++ +V+ WN+M++G A++G + V F M+ I P+ VT
Sbjct: 303 CGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSA 362
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ A + G L+ Q + K + + +D+ + G ++ A + + + +
Sbjct: 363 VLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARR-VFDRNSDKD 421
Query: 363 AAVWGALLGACRMH 376
+W A++ +H
Sbjct: 422 VVMWSAMIMGYGLH 435
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 345/566 (60%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + H + D N ++N Y KCG D AR++FD M V+ +++W
Sbjct: 66 CAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISW 125
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+ N + A+ LFS+M R G + +FTLSS L A A + +Q+H +
Sbjct: 126 NTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIE-CKQLHTIAI 184
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D + +VG++ LD+YA+ + + DA ++F + K V+W++L AG + E+ L
Sbjct: 185 KLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLC 244
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F REG + T F+ SS+ + AS + +G VHA ++K G FV +LVD+YA
Sbjct: 245 LFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYA 304
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IE + +VF + +++VV WN+M+ ++H + FEKM + GI PN+VT+L
Sbjct: 305 KCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLS 364
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSH GL++EG+ YF L+ EP HY VD+LGR+G D A K + +MP E
Sbjct: 365 ILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFE 424
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA++WG+LLG+ R+HKN+ L AAE++F L+P + G H+LL+N+YA++G + AR
Sbjct: 425 PTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVAR 484
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K +++SG KKE SW+E K +H+FVA + HP ++ K EI ++++I + ++
Sbjct: 485 KYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQ 544
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L ++E L+ HSEKLA AF LIS PP I I KN+R+CGDCHS K S +
Sbjct: 545 CDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCIT 604
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
ER++IVRD NRFHHF+DG CSCGD+W
Sbjct: 605 ERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 1/177 (0%)
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
F+ + A SL GK H I G N L+++Y K G + A +VF+
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ R ++SWN+M+ G + ++ F +M R G + T L AC+ + E
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + K ++ F+D+ + ++ A MP E T+ W +L
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EKTSVTWSSLFAG 232
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 348/568 (61%), Gaps = 7/568 (1%)
Query: 2 CTHLKKLKEARIVHAHI--LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C K L+ + +HA + LG A+ D+A + ++N Y+ C L A LFD++P ++
Sbjct: 68 CISAKALEPGKQLHARLCQLGIAYNLDLATK--LVNFYSVCNSLRNAHHLFDKIPKGNLF 125
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W LI Y+ N E AI L+ QML GLKP+ FTL VLKA A +T + GR +H
Sbjct: 126 LWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGE-GRVIHER 184
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++ G++ +V+VG++L+DMYA+ + DA +F + ++ V WN+++A +A+ +++
Sbjct: 185 VIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDES 244
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L EM +G PT + +V ++ A L G+ +H + G Q V L+DM
Sbjct: 245 LSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDM 304
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GS++ A +F RL ++ VVSWN+++TG A HGL + FE+M++ P+ +TF
Sbjct: 305 YAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITF 363
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ L ACS LLDEG+ + LM + + P HY VDLLG G LD A IR+M
Sbjct: 364 VGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMD 423
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ P + VWGALL +C+ H NVEL A E++ EL+P DSG +++LAN+YA +G+ AR
Sbjct: 424 VMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVAR 483
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R++M + G+KK ACSW+E KN V+ F++ D +HP I+ + + + +++ GYVPD
Sbjct: 484 LRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPD 543
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ V ++ E+ + HSE+LA+AF LIST PG+ + I KN+R+C DCH A KF SK
Sbjct: 544 TGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISK 603
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ EREI VRD NR+HHFR G CSCGDYW
Sbjct: 604 ITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
H+ Y+S+ + S +LE GK +HA + + G + LV+ Y+ S+ +A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ K ++ WN ++ A +G + + + +ML G+ P+ T VL ACS +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ + + G E + VD+ + G + A + + + ++ A +W ++L A
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDA-RHVFDKIVDRDAVLWNSMLAA 234
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/565 (40%), Positives = 353/565 (62%), Gaps = 1/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L+ + VH I F++D+ +QN ++ YAKCG +++AR +F+ + +++V+W
Sbjct: 179 CSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSW 238
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGY QN P A+ +F QM + +KP+ L SVL+A D + G+ +H +
Sbjct: 239 TSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAY-TDVEDLEQGKSIHGCVV 297
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ + SL MYA+ Q+ A F +E N + WNA+I+G+A+ +A+
Sbjct: 298 KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVG 357
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM+ + + S A A GSL+ KW+ ++ K+ + FV L+DM+A
Sbjct: 358 LFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFA 417
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS++ A +VF+R L +DVV W++M+ G HG G+ + F M + G+ PN VTF+
Sbjct: 418 KCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVG 477
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LTAC+H+GL++EG F MK +G+E HY VDLLGR+G L+ A FI MPIEP
Sbjct: 478 LLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEP 537
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+VWGALLGAC+++++V LG YAAE++F LDP ++G ++ L+N+YAS+ + A+ R
Sbjct: 538 GVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRI 597
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M+E G+ K+ S +E + F D +HP+ I ++ + ++K+ G++P
Sbjct: 598 LMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIES 657
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL +Q+E+E L HSE+LA+A+ LIST PG+T+ I KN+R C +CHSA K SK+V
Sbjct: 658 VLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVN 717
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFHHF++G CSC DYW
Sbjct: 718 REIVVRDANRFHHFKNGVCSCRDYW 742
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 187/363 (51%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ S + +NA G + ARK+FDE P + W A+I GYS ++
Sbjct: 90 IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+AI ++S+M G+ P+ FTL VLKA +G + G++VH + G++ +V+V +
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKAC-SGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+ +YA+ +++ A +F L+ +N VSW ++I+G+ + +ALR F +M + +P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SV A LEQGK +H V+K G + + +L MYAK G + A F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ +V+ WN+M++G A++G V F++M+ I + +T + AC+ G LD
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ + K + +D+ + G +D A + + + ++ VW A++
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLA-REVFDRTLDKDVVVWSAMIVGY 447
Query: 374 RMH 376
+H
Sbjct: 448 GLH 450
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA + G + ++ + ++ ++ A +F + WNA+I G++ +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
A+ +S M G P F+ V A + LE GK VH + + G + FV N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LV +YAK G +E A VF L R++VSW SM++G Q+GL +R F +M + + P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ + + VL A + L++G+ + K G+E E ++ + + G + A F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 355 REMPIEPTAAVWGALL 370
+M I P +W A++
Sbjct: 329 DQMEI-PNVMMWNAMI 343
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 361/599 (60%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN-------------------------- 35
C LK KE +H H+L ++ D+ + ++++
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 36 -----AYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
YA G ++ AR +FDE+PVKD+V+W A+ISGY + + A+ LF +M++ ++
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ +V+ AS A + + GRQVH++ +G+ N+ + ++L+D Y++ +M+ A
Sbjct: 193 PDESTMVTVISAS-ARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L K+ +SWN LI G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 211 LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
++ G+W+H ++ K G + + +L+DMY+K G IE A +VFN +L + + +WN+M+
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGV 327
G A HG A F +M +N I P+ +TF+ +L+ACSHAG+LD G+ F ++ + +
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG +GL A + I M +EP +W +LL AC+MH NVELG A+
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQ 491
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+F+++P++ G ++LL+NIYA+AGR N+ AR R ++ + G+KK P CS +E + VH F+
Sbjct: 492 NLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFI 551
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA+AF
Sbjct: 552 IGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFG 611
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST P + + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC DYW
Sbjct: 612 LISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 193/389 (49%), Gaps = 37/389 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ + +++ W + G++ + P +A+ L+ M+ LGL PN +T +LK
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLK- 71
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF---------- 152
S A K G Q+H LK GY+ ++YV +SL+ MY + ++++DA +F
Sbjct: 72 SCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131
Query: 153 -TALES--------------------KNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
TAL + K+ VSWNA+I+G+ ++AL F EM++
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + +V +A A +GS+E G+ VH+ + G + N L+D Y+K G +E A
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L +DV+SWN ++ G L K + F++MLR+G +PN VT L +L AC+H G
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 312 LDEGQGYFALMKKH--GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+D G+ + K GV + + +D+ + G ++ A + M + + W A+
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAM 370
Query: 370 LGACRMH--KNVELGAYAAERIFELDPHD 396
+ MH N ++ R E+ P D
Sbjct: 371 IFGFAMHGRANAAFDIFSRMRKNEIKPDD 399
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
F+ + A +F ++ N + WN + GHA + AL+ + M+ G P +++ +
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR------ 255
+ A + ++G +H HV+K G +L +V +L+ MY ++ +EDA KVF+R
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 256 -------------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ +DVVSWN+M++G + G K + F++M++
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ P++ T + V++A + +G ++ G+ + + HG +D + G ++ A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
+ + + W L+G
Sbjct: 250 CGLFLGLSYKDVIS-WNILIGG 270
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/568 (39%), Positives = 352/568 (61%), Gaps = 6/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L + VHA + + +D+ + ++ Y CG ++ AR++FD+M V+D+V+W
Sbjct: 273 CSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSW 332
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I GY++N E+A LF+ M G++P++ T ++ A A + D R++H+ +
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINAC-ASSADLSLAREIHSQVV 391
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ ++ V ++L+ MYA+ + DA +F A+ ++ VSW+A+I + GE+A
Sbjct: 392 RAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFE 451
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF--VGNTLVDM 239
TF M R EP +Y ++ A G+L+ G ++ IK+ LV+ VGN L++M
Sbjct: 452 TFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKA--DLVSHIPVGNALINM 509
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
K GSIE A +F +++RDVV+WN M+ G + HG + + F++ML+ PN VTF
Sbjct: 510 NVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTF 569
Query: 300 LCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACS AG ++EG+ +F+ L+ G+ P Y VDLLGRAG LD A I MP
Sbjct: 570 VGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMP 629
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P +++W LL ACR++ N+++ AAER +P+D ++ L+++YA+AG + A+
Sbjct: 630 LKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAK 689
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M+ GV+KE C+W+E + +H FV D +HPQ I+ + + IK+ GY+P
Sbjct: 690 VRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPV 749
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ +VL +QE+E + HSEKLA+A+ ++S P G+ I I KN+RVCGDCHSA KF SK
Sbjct: 750 TQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISK 809
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REII RD +RFHHF++G CSCGDYW
Sbjct: 810 VTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 194/372 (52%), Gaps = 2/372 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L+ + V HI+ S + +I NT++ ++ CG + EAR+ FD + K +VT
Sbjct: 70 RCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVT 129
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+I+GY+Q + A LF QM+ ++P+ T VL A + A K G++ HA
Sbjct: 130 WNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPA-GLKLGKEFHAQV 188
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+ + +G++L+ MY + MD A +F L ++ ++N +I G+A+ +GEKA
Sbjct: 189 IKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAF 248
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F M +EGF+P S+ S+ ++ +L GK VHA + +G V L+ MY
Sbjct: 249 QLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMY 308
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
GSIE A +VF+++ RDVVSW M+ G A++ + F M GI P+++T++
Sbjct: 309 MGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYI 368
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ AC+ + L + + + + G + V + + G + A + M
Sbjct: 369 HIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRR 428
Query: 361 PTAAVWGALLGA 372
+ W A++GA
Sbjct: 429 DVVS-WSAMIGA 439
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 4/321 (1%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D G+QV ++ G N+Y ++L+ +++ M +A F ++E+K V+WNA+IA
Sbjct: 76 DAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIA 135
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
G+A+ ++A F +M+ E EP+ ++ V A +S L+ GK HA VIK G
Sbjct: 136 GYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVS 195
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
+G LV MY K GS++ A +VF+ L KRDV ++N M+ G A+ G G+ + F +M
Sbjct: 196 DFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQ 255
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
+ G PN+++FL +L CS L G+ A G+ + + + G ++
Sbjct: 256 QEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIE 315
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANI 406
A + +M + + W ++ + N+E G +A + + P D +I + N
Sbjct: 316 GARRVFDKMKVRDVVS-WTVMIRGYAENSNIEDAFGLFATMQEEGIQP-DRITYIHIINA 373
Query: 407 YASAGRLNDAARARKMMKESG 427
AS+ L+ A + +G
Sbjct: 374 CASSADLSLAREIHSQVVRAG 394
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/614 (39%), Positives = 351/614 (57%), Gaps = 51/614 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H + S ++ + N +++ YAKCG +DEA +F M VKD+V+W
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 62 TALISGYSQNDQPENAIILFS-----------------------------------QMLR 86
A+++GYSQ + E+A+ LF QML
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 87 LGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV-------YVGSSLLDM 138
G+KPN+ TL SVL + GA G+++H + +KY D V + L+DM
Sbjct: 359 SGIKPNEVTLISVLSGCASVGAL--MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 139 YARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLREGFE--PT 194
YA+ ++D A +F +L K V+W +I G+++ + KAL SEM E + P
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-FVGNTLVDMYAKSGSIEDAEKVF 253
F+ S A AS +L GK +HA+ +++ V FV N L+DMYAK GSI DA VF
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ ++ ++ V+W S++TG HG G+ + F++M R G + VT L VL ACSH+G++D
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G YF MK GV P HY VDLLGRAG L+ AL+ I EMP+EP VW A L
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H VELG YAAE+I EL + G + LL+N+YA+AGR D R R +M+ GVKK P
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CSWVE F D HP I++ + ++IK IGYVP++ L D +E++
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLALA+ +++TP G+ I I KN+RVCGDCH+AF + S++++ +II+RD++RF
Sbjct: 777 DLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF 836
Query: 553 HHFRDGFCSCGDYW 566
HHF++G CSC YW
Sbjct: 837 HHFKNGSCSCKGYW 850
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 212/447 (47%), Gaps = 60/447 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++ HA L + F +++ + N ++ Y++C L +ARK+FDEM V D+V+W
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSW 196
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++I Y++ +P+ A+ +FS+M G +P+ TL +VL + T G+Q+H F
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT-HSLGKQLHCFA 255
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ N++VG+ L+DMYA+ MD+A +F+ + K+ VSWNA++AG+++ E A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 181 RTFS-----------------------------------EMLREGFEPTHFSYSSVFTAL 205
R F +ML G +P + SV +
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 206 ASTGSLEQGKWVHAHVI-------KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL- 257
AS G+L GK +H + I K+G V N L+DMYAK ++ A +F+ L
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 258 -KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA--PNQVTFLCVLTACSHAGLLDE 314
+RDVV+W M+ G +QHG + +M PN T C L AC+ L
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 315 GQGY--FALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ +AL + P +V+ +D+ + G + A + + + + W +L+
Sbjct: 496 GKQIHAYALRNQQNAVPL---FVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLM 551
Query: 371 GACRMHKNVE--LGAYAAERI--FELD 393
MH E LG + R F+LD
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLD 578
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 212/490 (43%), Gaps = 57/490 (11%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD--MVTWTA 63
K + + +++H +L + + + +++ Y GCL A L P D + W +
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LI Y N + LF M L P+ +T V KA G + + G HA L
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE-ISSVRCGESAHALSLVT 156
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ NV+VG++L+ MY+R + DA +F + + VSWN++I +A+ + + AL F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 184 SEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
S M E G P + + +V AS G+ GK +H + S FVGN LVDMYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK---------------- 286
G +++A VF+ + +DVVSWN+M+ G +Q G + VR FEK
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 287 -------------------MLRNGIAPNQVTFLCVLTACSHAGLLDEGQ-------GYFA 320
ML +GI PN+VT + VL+ C+ G L G+ Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACRMHKNV 379
++K+G E +D+ + +D A + P E W ++G H +
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
+FE D ++ + L A R K + ++ +
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLA-ALRIGKQIHAYALRNQ-------- 507
Query: 440 KNAVHMFVAN 449
+NAV +FV+N
Sbjct: 508 QNAVPLFVSN 517
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/601 (40%), Positives = 349/601 (58%), Gaps = 51/601 (8%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
H + S ++ + N +++ YAK G +DEA +F MPVKD+V+W A+++GYSQ +
Sbjct: 252 HGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRF 311
Query: 75 ENAIILFSQM-----------------------------------LRLGLKPNQFTLSSV 99
E+A+ LF QM L G+KPN+ TL SV
Sbjct: 312 EDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 100 LKA-SGAGATDDKFGRQVHAFCLKYGYDWNV-------YVGSSLLDMYARFDQMDDAWFL 151
L + GA G+++H + +KY D V + L+DMYA+ ++D A +
Sbjct: 372 LSGCASVGAL--MHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAM 429
Query: 152 FTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLREGFE--PTHFSYSSVFTALAS 207
F +L K V+W +I G+++ + KAL SEM E + P F+ S A AS
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 208 TGSLEQGKWVHAHVIKSGGQLVA-FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+L GK +HA+ +++ V FV N L+DMYAK G I DA VF+ +++++ V+W S
Sbjct: 490 LAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTS 549
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH- 325
++TG HG G+ + FE+M R G + VT L VL ACSH+G++D+G YF MK
Sbjct: 550 LMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDF 609
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
GV P HY VDLLGRAG L+ AL+ I EMP+EP VW ALL CR+H VELG YA
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYA 669
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A++I EL ++ G + LL+N+YA+AGR D R R +M+ G+KK P CSWVE
Sbjct: 670 AKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTT 729
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F D HP I++ + ++IK IGYVP++ L D +E++ L HSEKLALA
Sbjct: 730 FFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ +++TP G+ I I KN+RVCGDCH+AF + S++++ EII+RD++RFHHF++G CSC Y
Sbjct: 790 YGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGY 849
Query: 566 W 566
W
Sbjct: 850 W 850
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 214/447 (47%), Gaps = 60/447 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++ HA + F +++ + N ++ Y++CG L +ARK+FDEMPV D+V+W
Sbjct: 137 CGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSW 196
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++I Y++ +P+ A+ +FS+M G +P+ TL +VL + T G+Q H F
Sbjct: 197 NSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT-RSLGKQFHGFA 255
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ N++VG+ L+DMYA+F MD+A +F+ + K+ VSWNA++AG+++ E A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 181 RTFS-----------------------------------EMLREGFEPTHFSYSSVFTAL 205
R F +ML G +P + SV +
Sbjct: 316 RLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 206 ASTGSLEQGKWVHAHVI-------KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL- 257
AS G+L GK +H + I K+G V N L+DMYAK ++ A +F+ L
Sbjct: 376 ASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSP 435
Query: 258 -KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA--PNQVTFLCVLTACSHAGLLDE 314
+RDVV+W M+ G +QHG + +M PN T C L AC+ L
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSI 495
Query: 315 GQGY--FALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ +AL + P +V+ +D+ + G + A + + + +E W +L+
Sbjct: 496 GKQIHAYALRNQQNAVPL---FVSNCLIDMYAKCGDIGDA-RLVFDNMMEKNEVTWTSLM 551
Query: 371 GACRMHKNVE--LGAYAAERI--FELD 393
MH E LG + R F+LD
Sbjct: 552 TGYGMHGYGEEALGIFEEMRRIGFKLD 578
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 191/434 (44%), Gaps = 48/434 (11%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD--MVTWTA 63
K + + +++H +L + + + +++ Y GCL A L P D + W +
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LI Y N + + F M L P+ +T V KA G + + G HA
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGE-ISSVRCGDSSHALSRVT 156
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ NV+VG++L+ MY+R + DA +F + + VSWN++I +A+ + + AL F
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216
Query: 184 SEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
S+M E GF P + +V AS G+ GK H + S FVGN LVDMYAK
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE----------------- 285
G +++A VF+ + +DVVSWN+M+ G +Q G + VR FE
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336
Query: 286 ------------------KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ-------GYFA 320
+ML +GI PN+VT + VL+ C+ G L G+ Y
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACRMHKNV 379
++K+G E +D+ + +D A + P E W ++G H +
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 380 ELGAYAAERIFELD 393
+FE D
Sbjct: 457 NKALELLSEMFEED 470
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN+LI + K L +F M + P ++++ VF A S+ G HA
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+G FVGN LV MY++ GS+ DA KVF+ + DVVSWNS++ A+ G K +
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214
Query: 283 WFEKMLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGY--FALMKKHGVEPEEAHYV--TF 337
F KM G P+ +T + VL C+ G G+ + FA+ E + +V
Sbjct: 215 MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTS----EMIQNMFVGNCL 270
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
VD+ + G++D A MP++ + W A++
Sbjct: 271 VDMYAKFGMMDEANTVFSNMPVKDVVS-WNAMVAG------------------------- 304
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
Y+ GR DA R + M+E +K +
Sbjct: 305 ---------YSQIGRFEDAVRLFEQMQEEKIKMD 329
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/598 (39%), Positives = 353/598 (59%), Gaps = 35/598 (5%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + L + +H ++ ++F +D+ + N++++ Y+ G LD A +F ++ KD+V+W
Sbjct: 142 TEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWN 201
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++ISG+ Q PE A+ LF +M +PN+ T+ VL A A D +FGR + +
Sbjct: 202 SMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSAC-AKRIDLEFGRWACDYIER 260
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G D N+ + +++LDMY + ++DA LF +E K+ VSW +I G+A+ + + A R
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRV 320
Query: 183 FSEMLREGF--------------------------------EPTHFSYSSVFTALASTGS 210
F M RE +P + +S A A G+
Sbjct: 321 FDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
++ G W+H ++ K G +L + +L+DMY+K G +E A +VF + +RDV W++M+ G
Sbjct: 381 MDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAG 440
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEP 329
A HG G+A + F KM + PN VTF +L ACSH+GL+DEG+ +F M+ +GV P
Sbjct: 441 LAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVP 500
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VD+LGRAG L+ A++ I +MPI P+A+VWGALLGACR++ NVEL A R+
Sbjct: 501 GSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRL 560
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
E D ++ G ++LL+NIYA AG+ + +R R+ MK SG++KEP CS +E +H F+
Sbjct: 561 LETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVG 620
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ-EREAKLQVHSEKLALAFAL 508
D++HP I+ K EI +IK GYV D SH+L + +++ +E L +HSEKLA+A+ L
Sbjct: 621 DNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGL 680
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I P I I KN+RVCGDCHS K SK+ R+I++RD RFHHF G CSC DYW
Sbjct: 681 IRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 40/411 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDM 58
KC + K LK+ +HAH+L + D + A A LD A K+FD++P ++
Sbjct: 39 KCANKKHLKQ---LHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNL 95
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVH 117
TW LI ++ + +P +++F QML + PN +T V+KA+ + G+ +H
Sbjct: 96 YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAA-TEVSSLLAGQAIH 154
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K + ++++ +SL+ Y+ +D A+ +F+ + K+ VSWN++I+G + E
Sbjct: 155 GMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPE 214
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL+ F M E P + V +A A LE G+W ++ ++G + + N ++
Sbjct: 215 EALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAML 274
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA---- 293
DMY K GS+EDA ++F+++ ++D+VSW +M+ G A+ G A R F+ M R I
Sbjct: 275 DMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNA 334
Query: 294 ----------------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
PN+VT L AC+ G +D G +KK
Sbjct: 335 LISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ 394
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
G++ + +D+ + G L++AL+ + VW A++ MH
Sbjct: 395 GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMH 444
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 143/292 (48%), Gaps = 10/292 (3%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA--RFDQMDDAWFLFTALESKNEVSWNAL 166
+ K +Q+HA L+ G ++ + L A +D A +F + N +WN L
Sbjct: 42 NKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTL 101
Query: 167 IAGHARKSEGEKALRTFSEMLREGFE-PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
I A + + L F +ML E P +++ V A SL G+ +H V+K+
Sbjct: 102 IRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKAS 161
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
F+ N+L+ Y+ G ++ A VF++++++D+VSWNSM++G Q G + ++ F+
Sbjct: 162 FGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M PN+VT + VL+AC+ L+ G+ ++++G++ +D+ + G
Sbjct: 222 RMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCG 281
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPHD 396
L+ A + +M E W ++ ++G Y AA R+F++ P +
Sbjct: 282 SLEDARRLFDKME-EKDIVSWTTMIDG-----YAKVGDYDAARRVFDVMPRE 327
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I K + + ++++ Y+KCG L++A ++F + +D+ W
Sbjct: 375 CAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVW 434
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD 110
+A+I+G + + AI LFS+M +KPN T +++L A S +G D+
Sbjct: 435 SAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDE 484
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/536 (42%), Positives = 343/536 (63%), Gaps = 12/536 (2%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+KCG ++ AR LF ++ D+V++ A+ISGY+ N++ E+++ LF ++L G K N
Sbjct: 252 YSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNS--- 308
Query: 97 SSVLKASGAGATDDKFG-----RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFL 151
SS++ G FG R +H FC K G N V ++L +Y+R ++++ A L
Sbjct: 309 SSIV---GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLL 365
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F K+ SWNA+I+G+A+ EKA+ F EM + P + +S+ +A A G+L
Sbjct: 366 FDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGAL 425
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
GKWVH + + + FV L+DMYAK GSI +A+++F+ + +++ V+WN+M++G
Sbjct: 426 SLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGY 485
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPE 330
HG G + F +ML + ++P VTFL VL ACSHAGL+ EG F +++ HG EP
Sbjct: 486 GLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPL 545
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY VDLLGRAG LD+AL FIR+MP+EP VWGALLGAC +HK+ L A++++F
Sbjct: 546 PEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLF 605
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
ELDP + G ++LL+NIY++ +AA R ++K + K P C+ +E N +H+F + D
Sbjct: 606 ELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGD 665
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
+HPQ I+ +++ K+++ G+ ++ L +++E+E ++VHSEKLA+AF LI+
Sbjct: 666 QSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLIT 725
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ PG+ I I KN+RVC DCH+A KF SK+ ER I+VRD NRFHHF+DG CSCGDYW
Sbjct: 726 SEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 177/356 (49%), Gaps = 2/356 (0%)
Query: 21 SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIIL 80
+ F +D+ + + I+ Y K + ARK+FD M +D V W ++SG +N + AI++
Sbjct: 135 AGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILI 194
Query: 81 FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
F M++ G+ + T+++VL A D G + +K G+ + YV + L +Y+
Sbjct: 195 FGDMVKGGIGFDSTTVAAVLPGV-AELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYS 253
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
+ +++ A LF + + VS+NA+I+G+ +E E ++R F E+L G + S
Sbjct: 254 KCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVG 313
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ G L + +H KSG + V L +Y++ IE A +F+ ++
Sbjct: 314 LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKS 373
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+ SWN+M++G AQ+GL + + F++M + + PN VT +L+AC+ G L G+
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
L+ + E +D+ + G + A + MP E A W A++ +H
Sbjct: 434 LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLH 488
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 207/461 (44%), Gaps = 48/461 (10%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+ L + HA I+ + ND+ + + + +D+A LF +P D+ + L
Sbjct: 20 VSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVL 79
Query: 65 ISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
I +S N+ P +A+ L++ + + L+P+ FT + V+ + + +HA +
Sbjct: 80 IRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLG----LLLHAHSIVA 135
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ +++VGS+++ Y +F ++ A +F + ++ V WN +++G + S ++A+ F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M++ G + ++V +A L G + +K G A+V L +Y+K
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV- 302
G IE A +F ++ + D+VS+N+M++G + +++VR F+++L +G N + + +
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 303 ----------LTACSHA---------------------GLLDEGQGYFALMKKHGVEPEE 331
LT C H L+E + L+ E
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESA-RLLFDESSEKSL 374
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAER 388
A + + + GL ++A+ +EM + P ++L AC + LG + +
Sbjct: 375 ASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDL 434
Query: 389 I----FELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
I FE + S L ++YA G + +A R MM E
Sbjct: 435 INRESFESNIFVSTA---LIDMYAKCGSITEAQRLFSMMPE 472
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH I +F+++I + +++ YAKCG + EA++LF MP K+ VTW
Sbjct: 419 CAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTW 478
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGAT---DDKFGRQVH 117
A+ISGY + A+ LF++ML + P T SVL A S AG D+ F VH
Sbjct: 479 NAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVH 538
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEG 176
+G++ + ++D+ R +D A F+ W AL+ +
Sbjct: 539 ----DHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDA 594
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
A R S+ L E +P + Y + + + S G
Sbjct: 595 NLA-RLASDKLFE-LDPQNVGYYVLLSNIYSAG 625
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/587 (39%), Positives = 355/587 (60%), Gaps = 35/587 (5%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + SA +D+ + N++++ Y CG LD A K+F + KD+V+W ++I+G+ Q
Sbjct: 155 LHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 214
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P+ A+ LF +M +K + T+ VL A A D +FGR+V ++ + + N+ + +
Sbjct: 215 PDKALELFKKMESEDVKASHVTMVGVLSAC-AKIRDLEFGRRVCSYIEENRVNVNLTLAN 273
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSW------------------------------ 163
++LDMY + ++DA LF A+E K+ V+W
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVA 333
Query: 164 -NALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
NALI+ + + + +AL F E+ L++ + + S +A A G+LE G+W+H+++
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
K+G ++ +V + L+ MY+K G +E A +VFN + KRDV W++M+ G A HG G V
Sbjct: 394 KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAV 453
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDL 340
F KM + PN VTF V ACSH GL+DE + F M+ +G+ PE+ HY VD+
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDV 513
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
LGR+G L++A+KFI MPI P+ +VWGALLGAC++H N+ L A R+ EL+P + G H
Sbjct: 514 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAH 573
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LL+NIYA +G+ ++ + RK M+ +G+KKEP CS +E +H F++ D+AHP ++
Sbjct: 574 VLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 633
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFALISTPPGSTIHI 519
K E+ EK+K GY P+ SHVL +++E +E L +HSEKLA+ + LIST I +
Sbjct: 634 GKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRV 693
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+R+CGDCH+ K S++ REIIVRD RFHHFR+G CSC D+W
Sbjct: 694 IKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 224/448 (50%), Gaps = 49/448 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTI--LNAYAKCGCLDEARKLFDEMPVKDM 58
+C+ L++LK+ HAH++ + +D + + + A + L+ ARK+FDE+P +
Sbjct: 40 RCSSLRQLKQ---THAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNS 96
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLK--PNQFTLSSVLKASGAGATDDKFGRQV 116
TW LI Y+ P +I F M+ + PN++T ++KA+ A + G+ +
Sbjct: 97 FTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAA-AEVSSLSLGQSL 155
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H +K +V+V +SL+ Y +D A +FT ++ K+ VSWN++I G +K
Sbjct: 156 HGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 215
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+KAL F +M E + +H + V +A A LE G+ V +++ ++ + + N +
Sbjct: 216 DKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAM 275
Query: 237 VDMYAKSGSIEDAEKVF-------------------------------NRLLKRDVVSWN 265
+DMY K GSIEDA+++F N + K+D+V+WN
Sbjct: 276 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWN 335
Query: 266 SMLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
++++ Q+G +A + + E L+ I NQ+T + L+AC+ G L+ G+ + +KK
Sbjct: 336 ALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKK 395
Query: 325 HGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+G++ YVT + + + G L++A + + + VW A++G MH G
Sbjct: 396 NGIKMN--FYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHG---CG 449
Query: 383 AYAAERIFELDPHDSGPH-ILLANIYAS 409
+ A + +++ + P+ + N++ +
Sbjct: 450 SEAVDMFYKMQEANVKPNGVTFTNVFCA 477
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 37/309 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+ R V ++I + ++ + N +L+ Y KCG +++A++LFD M KD VTW
Sbjct: 244 CAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 303
Query: 62 TAL-------------------------------ISGYSQNDQPENAIILFSQM-LRLGL 89
T + IS Y QN +P A+++F ++ L+ +
Sbjct: 304 TTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNI 363
Query: 90 KPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
K NQ TL S L A GA + GR +H++ K G N YV S+L+ MY++ ++ A
Sbjct: 364 KLNQITLVSTLSACAQVGALE--LGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKA 421
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F ++E ++ W+A+I G A G +A+ F +M +P ++++VF A + T
Sbjct: 422 REVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 481
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNS 266
G +++ + + + S G + +VD+ +SG +E A K + + W +
Sbjct: 482 GLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 541
Query: 267 MLTGCAQHG 275
+L C H
Sbjct: 542 LLGACKIHA 550
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 10/308 (3%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYA--RFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
+Q HA ++ G + Y S L + A F ++ A +F + N +WN LI +A
Sbjct: 48 KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107
Query: 172 RKSEGEKALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+ ++ F +M+ + P +++ + A A SL G+ +H IKS
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV N+L+ Y G ++ A KVF + ++DVVSWNSM+ G Q G + F+KM
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+ + VT + VL+AC+ L+ G+ + ++++ V +D+ + G ++
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYA 408
A + M E W +L + ++ E AA + P D L + Y
Sbjct: 288 AKRLFDAME-EKDNVTWTTMLDGYAISEDYE----AAREVLNAMPKKDIVAWNALISAYE 342
Query: 409 SAGRLNDA 416
G+ N+A
Sbjct: 343 QNGKPNEA 350
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +H++I + K + + + +++ Y+KCG L++AR++F+ + +D+ W
Sbjct: 377 CAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVW 436
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I G + + A+ +F +M +KPN T ++V A D+ +
Sbjct: 437 SAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMES 496
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGE 177
YG + ++D+ R ++ A A+ S W AL+ HA S E
Sbjct: 497 SYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAE 556
Query: 178 KALRTFSEM 186
A E+
Sbjct: 557 MACTRLLEL 565
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 340/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K +K + +HA + + F D + ++N Y C L AR LFD +P ++ W
Sbjct: 85 CIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLW 144
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI GY+ N E A+ L+ QM GL P+ FT VLKA A + + GR++H +
Sbjct: 145 NVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEH-GREIHEHVV 203
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ +V+VG++L+DMYA+ + A +F + ++ V WN+++A +++ + L
Sbjct: 204 QTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLS 263
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
SEM+ G PT + + +A A +L QG+ +H + + V LVDMYA
Sbjct: 264 LCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYA 323
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A +F RL + VVSWN+M+TG A HG + FE+M R P+ +TF+
Sbjct: 324 KCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVG 382
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GLL+EG +F +++ + ++P HY VDLLG +G LD A I +M +
Sbjct: 383 VLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL 442
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + VWGALL +C++H NVELG A ER+ EL+P D+G +++L+NIYA AG+ A+ R
Sbjct: 443 PDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLR 502
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M + +KK ACSW+E KN VH F++ D +HP I+ + + +K+ GY P +
Sbjct: 503 KLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTG 562
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V + E+ + HSE+LA+AF LISTPPG+ + I KN+R+C DCH A KF SK+
Sbjct: 563 SVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKIT 622
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREI VRD NR+HHF+DG CSCGDYW
Sbjct: 623 EREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
PT+ +Y+S+ + + +++ GK +HA V +G + LV++Y S+ A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F+R+ K ++ WN ++ G A +G +A V+ + +M G+ P+ TF VL AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ G+ + + G E + +D+ + G + A + ++ + A +W ++L
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVLWNSML 249
Query: 371 GA 372
A
Sbjct: 250 AA 251
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/557 (42%), Positives = 338/557 (60%), Gaps = 9/557 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH H + + +D + + ++ Y +CG +D+AR LFD++ V+ + TW A+I G +Q
Sbjct: 546 VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRC 605
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQVHAFCLKYGYDWNVY 130
A+ LF QM R G P+ T ++L A+ D++ + ++VH+ G ++
Sbjct: 606 GREALSLFLQMQREGFIPDATTFINILSAN----VDEEALEWVKEVHSHATDAGL-VDLR 660
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
VG++L+ Y++ + A +F + +N +W +I G A+ G A F +MLREG
Sbjct: 661 VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG 720
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P +Y S+ +A ASTG+LE K VH H + +G VGN LV MYAK GSI+DA
Sbjct: 721 IVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDAR 780
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF+ +++RDV SW M+ G AQHG G + +F KM G PN +++ VLTACSHAG
Sbjct: 781 SVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAG 840
Query: 311 LLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L+DEG+ F ++ + +G+EP HY VDLLGRAGLL+ A FI MPIEP A WGAL
Sbjct: 841 LVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGAL 900
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
LGAC + N+E+ +AA+ +L P + ++LL+NIYA+ G+ R MM+ G++
Sbjct: 901 LGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIR 960
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEP SW+E N +H FV D +HP+ I+ + ++ E++K GYVPD+ VL DQ+
Sbjct: 961 KEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQE 1020
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
+E L HSEKLA+ + L+ T I + KN+RVC DCH+A KF SK+ REI+ RD
Sbjct: 1021 HKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDA 1080
Query: 550 NRFHHFRDGFCSCGDYW 566
RFHHF+DG CSCGDYW
Sbjct: 1081 KRFHHFKDGVCSCGDYW 1097
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 212/379 (55%), Gaps = 14/379 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + + A+ VH I+ S + ++ + N +L Y +CG L AR++FD++ K++
Sbjct: 127 RCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYI 186
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT +I GY++ E+A+ ++ +M + +PN+ T S+LKA + K+G+++HA
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC-PVNLKWGKKIHAHI 245
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G+ +V V ++L++MY + ++DA +F + +N +SW +I G A G++A
Sbjct: 246 IQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAF 305
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M REGF P ++Y S+ A AS G+LE K VH+H + +G L VGN LV MY
Sbjct: 306 HLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMY 365
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSI+DA VF+ + +RD+ SW M+ G AQHG G+ F +M RNG PN T+L
Sbjct: 366 AKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYL 425
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-------FVDLLGRAGLLDRALKF 353
+L A + A + ++ KH EEA +++ + + + G +D A +
Sbjct: 426 SILNASAIAS--TSALEWVKVVHKHA---EEAGFISDLRIGNALIHMYAKCGSIDDA-RL 479
Query: 354 IREMPIEPTAAVWGALLGA 372
+ + + W A++G
Sbjct: 480 VFDGMCDRDVISWNAMMGG 498
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 203/371 (54%), Gaps = 7/371 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ ++VH H + F +D+ + N +++ YAKCG +D+AR +FD M +D+++W A++ G
Sbjct: 439 LEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGG 498
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFCLKYGYD 126
+QN A +F QM + GL P+ T S+L G+ TD ++ +VH ++ G
Sbjct: 499 LAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGS--TDALEWVNEVHKHAVETGLI 556
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ VGS+ + MY R +DDA LF L ++ +WNA+I G A++ G +AL F +M
Sbjct: 557 SDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQM 616
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSGS 245
REGF P ++ ++ +A +LE K VH+H +G LV VGN LV Y+K G+
Sbjct: 617 QREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAG--LVDLRVGNALVHTYSKCGN 674
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ A++VF+ +++R+V +W M+ G AQHG G F +MLR GI P+ T++ +L+A
Sbjct: 675 VKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSA 734
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ G L+ + G+ + V + + G +D A +M +E
Sbjct: 735 CASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFS 793
Query: 366 WGALLGACRMH 376
W ++G H
Sbjct: 794 WTVMIGGLAQH 804
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH H + + +D+ + N +++ YAKCG +D+AR +FD+M +D+ +W
Sbjct: 735 CASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSW 794
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G +Q+ + A+ F +M G KPN ++ +VL A D+ RQ +
Sbjct: 795 TVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQ 854
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
YG + + + ++D+ R +++A F+ ++ W AL+ A + G +
Sbjct: 855 DYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLG--ACVTYGNLEM 912
Query: 181 RTFSEMLREGFEPTHFS-YSSVFTALASTGSLEQGKWVHAHVIKSG 225
F+ R +P S Y + A+TG EQ V + + + G
Sbjct: 913 AEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKG 958
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 18/279 (6%)
Query: 109 DDKFGRQV--HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE------ 160
D + GR V +F + + VGS+LL R + +FL + K+E
Sbjct: 19 DGQCGRGVISSSFRMNEAQVQRILVGSTLLS--GRQMRHSRLYFLSISGCFKSEKHKYLP 76
Query: 161 ---VSWNALIAGHARKSEGEKALRTFSEMLR----EGFEPTHFSYSSVFTALASTGSLEQ 213
V NA + G A ++ + ML+ +G FSY ++ +
Sbjct: 77 SVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILL 136
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
K VH +IKSG + +V N L+ +Y + G ++ A +VF++LLK+++ W +M+ G A+
Sbjct: 137 AKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAE 196
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+G + +R ++KM + PN++T+L +L AC L G+ A + + G + +
Sbjct: 197 YGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRV 256
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
V++ + G ++ A + I + +E W ++G
Sbjct: 257 ETALVNMYVKCGSIEDA-QLIFDKMVERNVISWTVMIGG 294
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/622 (38%), Positives = 362/622 (58%), Gaps = 68/622 (10%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCG------------------------------ 41
R VH+ ++ + + + N++LN Y KCG
Sbjct: 78 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 137
Query: 42 -CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSV 99
+D A LF+ MP + +V+W A+I+GY+QN A+ LFS+ML + P++FT++SV
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 197
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQ----- 144
L A A + + G+QVHA+ L+ +N V ++L+ YA+ DQ
Sbjct: 198 LSAC-ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 256
Query: 145 ------------------MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
M+ A +F + +++ V+W A+I G+ + ++A+ F M
Sbjct: 257 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 316
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G EP ++ ++V + AS L+ GK +H I+S + + V N ++ MYA+SGS
Sbjct: 317 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 376
Query: 247 EDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
A ++F+++ +++ ++W SM+ AQHG G+ V FE+MLR G+ P+++T++ VL+A
Sbjct: 377 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 436
Query: 306 CSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSHAG ++EG+ Y+ +K +H + PE +HY VDLL RAGL A +FIR MP+EP A
Sbjct: 437 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 496
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
WG+LL ACR+HKN EL AAE++ +DP++SG + +AN+Y++ GR +DAAR K K
Sbjct: 497 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 556
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
E V+KE SW ++ +H+F A+D HPQR ++ + E+IK G+VPD VL
Sbjct: 557 EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 616
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D + +E L HSEKLA+AF LISTP +T+ + KN+RVC DCH+A K SKV +REI
Sbjct: 617 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 676
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHFRDG CSC DYW
Sbjct: 677 IVRDATRFHHFRDGLCSCKDYW 698
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 204/455 (44%), Gaps = 69/455 (15%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
+AK G L +AR +F EMP +D V+WT ++ G ++ + AI M G P QFTL
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------------- 141
++VL +S A GR+VH+F +K G V V +S+L+MY +
Sbjct: 62 TNVL-SSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 142 ----------------FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+MD A LF ++ ++ VSWNA+IAG+ + KAL+ FS
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 186 MLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
ML E P F+ +SV +A A+ G++ GK VHA+++++ + V N L+ YAKSG
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 245 SIEDAEKV-------------FNRLLK--------------------RDVVSWNSMLTGC 271
S+E+A ++ F LL+ RDVV+W +M+ G
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
Q+G + F M+ G PN T VL+ C+ LD G+ + +E
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
+ + + R+G A + ++ W +++ A H E E +
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 392 --LDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
++P D ++ + + + AG +N+ R +K
Sbjct: 421 AGVEP-DRITYVGVLSACSHAGFVNEGKRYYDQIK 454
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 167/332 (50%), Gaps = 41/332 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--------- 52
C +L ++ + VHA+IL + + + N +++ YAK G ++ AR++ D+
Sbjct: 201 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 260
Query: 53 ------------------------MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
M +D+V WTA+I GY QN + + AI LF M+ G
Sbjct: 261 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 320
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL++VL + A D +G+Q+H ++ + + V ++++ MYAR A
Sbjct: 321 PEPNSYTLAAVLSVCASLACLD-YGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWA 379
Query: 149 WFLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + + E ++W ++I A+ +GE+A+ F EMLR G EP +Y V +A +
Sbjct: 380 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 439
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
G + +GK + IK+ Q+ + + +VD+ A++G +A++ R+ ++ D ++W
Sbjct: 440 AGFVNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAW 498
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
S+L+ C H + EK+L I PN
Sbjct: 499 GSLLSACRVHKNAELAELAAEKLL--SIDPNN 528
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
M+A+ ++ DA +F + ++ VSW ++ G R +A++T +M +GF PT F+
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
++V ++ A T + G+ VH+ V+K G V N++++MY K G E A VF R+
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 258 KRDVVSWNSMLT-------------------------------GCAQHGLGKATVRWFEK 286
R V SWN+M++ G Q+GL ++ F +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 287 ML-RNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
ML + +AP++ T VL+AC++ G + G+
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGK 211
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
M+AKSG + DA VF + +RD VSW M+ G + G ++ M +G P Q T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL++C+ G+ + + K G+ + +++ G+ G + A MP
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 359 IEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPHDS 397
+ ++ W A++ N LG AE +FE P S
Sbjct: 121 VRSVSS-WNAMVSL-----NTHLGRMDLAESLFESMPDRS 154
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/555 (41%), Positives = 346/555 (62%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + F D ++ N IL+ Y+K + E R LFDEMP D V++ +IS YSQ DQ
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E ++ F +M +G F +++L + A + + GRQ+H L D ++VG+
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIA-ANLSSLQMGRQLHCQALLATADSILHVGN 390
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ + ++A +F +L + VSW ALI+G+ +K L+ F++M
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRA 450
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++++V A AS SL GK +HA +I+SG F G+ LVDMYAK GSI+DA +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ R+ VSWN++++ A +G G+A + F KM+ +G+ P+ V+ L VLTACSH G ++
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G YF M +G+ P++ HY +DLLGR G A K + EMP EP +W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+HKN L AAE++F ++ D+ ++ ++NIYA+AG +K M+E G+KK
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
PA SWVE + +H+F +ND HP I +K E++ +I++ GY PD+S V+ D+Q +
Sbjct: 691 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMK 750
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L+ HSE+LA+AFALISTP G I + KN+R C DCH+A K SK+V+REI VRDT+R
Sbjct: 751 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSR 810
Query: 552 FHHFRDGFCSCGDYW 566
FHHF +G CSCGDYW
Sbjct: 811 FHHFSEGVCSCGDYW 825
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 194/361 (53%), Gaps = 4/361 (1%)
Query: 14 VHAHILGSAFKND--IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
VHA + F + + + N +L +Y + LD A LF+E+P KD VT+ LI+GY ++
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+I LF +M + G +P+ FT S VLKA G D G+Q+HA + G+ + V
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-VGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G+ +LD Y++ D++ + LF + + VS+N +I+ +++ + E +L F EM GF
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+ +F ++++ + A+ SL+ G+ +H + + + VGN+LVDMYAK E+AE
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L +R VSW ++++G Q GL A ++ F KM + + +Q TF VL A +
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L G+ A + + G VD+ + G + A++ EMP + A W AL+
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALIS 526
Query: 372 A 372
A
Sbjct: 527 A 527
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 3/287 (1%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L L+ R +H L + + + + N++++ YAKC +EA +F +P + V+WTA
Sbjct: 363 NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTA 422
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LISGY Q + LF++M L+ +Q T ++VLKAS + A+ G+Q+HAF ++
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS-LLLGKQLHAFIIRS 481
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G NV+ GS L+DMYA+ + DA +F + +N VSWNALI+ HA +GE A+ F
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
++M+ G +P S V TA + G +EQG ++ A G ++D+ +
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
+G +AEK+ + + + D + W+S+L C H R EK+
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 7/351 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
KN ++ NT+++ + K G + AR LFD MP + +VTWT L+ Y++N + A LF Q
Sbjct: 77 KNTVS-TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 84 MLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY--VGSSLLDMY 139
M R P+ T +++L + G QVHAF +K G+D N + V + LL Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
++D A LF + K+ V++N LI G+ + +++ F +M + G +P+ F++S
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
V A+ G+ +HA + +G A VGN ++D Y+K + + +F+ + +
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
D VS+N +++ +Q +A++ +F +M G F +L+ ++ L G+
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + VD+ + + + A + +P + T W AL+
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALI 424
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/609 (39%), Positives = 361/609 (59%), Gaps = 49/609 (8%)
Query: 7 KLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+ ++RI +H IL + D + N+IL+ Y KC C A KLF M KD V+W
Sbjct: 400 NVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNI 459
Query: 64 LISGYSQNDQPENAIILFSQM----------LRLGLKPN---QFTLSSVLKASGAGATDD 110
++S Y Q + ++ LF Q+ + GL N + L + K AG +
Sbjct: 460 MMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFN 519
Query: 111 KF-----------------GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
K G+Q+H LK G + +V +SL+DMY + +M+ A +F
Sbjct: 520 KLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFK 579
Query: 154 ALESKNE---------------VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSY 198
L ++ VSW+++++G+ + E AL+TFS M+ E F+
Sbjct: 580 HLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTL 639
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
+SV +A AS G LE G+ VH ++ K G L F+G++++DMY K GS+ DA +FN+
Sbjct: 640 TSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKD 699
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
R+VV W SM++GCA HG G+ VR FE M+ GI PN+V+F+ VLTACSHAGLL+EG Y
Sbjct: 700 RNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKY 759
Query: 319 FALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
F LM++ +G+ P H+ VDL GRAG L+ +FI I ++VW + L +CR+HK
Sbjct: 760 FRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHK 819
Query: 378 NVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWV 437
N+E+G + +++ EL+P D+GP+IL ++I A+ R +AA+ R +M++ GVKK P+ SW+
Sbjct: 820 NIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWI 879
Query: 438 ETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQV 497
+ KN VH FV D +HPQ I+ E+ ++K+IGY D + V+ +Q++R+ L
Sbjct: 880 QLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGY 939
Query: 498 HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRD 557
HSEKLA+A+ +IST PG+ I + KN+RVC DCH+ K+AS+++ REII+RD +RFHHF+
Sbjct: 940 HSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKH 999
Query: 558 GFCSCGDYW 566
G CSC DYW
Sbjct: 1000 GHCSCADYW 1008
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 206/447 (46%), Gaps = 58/447 (12%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +LN YAK L++A K+F+E+P D+ +WT LISG+++ + + LF++M G+
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
PNQFTLS VLK+ + D + G+ +H + L+ G D + + +S+LD Y +
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 142 ----------------------FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
M + LF L K+ SWN +I G R A
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L +M+ G ++S +S L GK +H V+K G FV N+L+DM
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM 564
Query: 240 YAKSGSIEDAEKVFNRLLKR---------------DVVSWNSMLTGCAQHGLGKATVRWF 284
Y K G +E A +F L + + VSW+SM++G Q+G + ++ F
Sbjct: 565 YCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTF 624
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
M+ + + ++ T V++AC+ AG+L+ G+ ++K G + + +D+ +
Sbjct: 625 SFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL------DPHDSG 398
G L+ A I + +W +++ C +H A R+FEL P++
Sbjct: 685 GSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQ----GREAVRLFELMINEGITPNEV- 738
Query: 399 PHILLANIYASAGRLNDAARARKMMKE 425
+ + + AG L + + ++M+E
Sbjct: 739 SFVGVLTACSHAGLLEEGCKYFRLMRE 765
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 32/263 (12%)
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G+ LL++YA+ ++ A +F + + SW LI+G AR L F++M +G
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383
Query: 192 EPTHFSYSSVFTALASTGSLEQ-GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P F+ S V + +S + + GK +H ++++G L A + N+++D Y K AE
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443
Query: 251 KVFNRLLKRDVVS-------------------------------WNSMLTGCAQHGLGKA 279
K+F + ++D VS WN+M+ G ++G +
Sbjct: 444 KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
+ KM+ G A N++TF L S +L G+ + K GV + + +D
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563
Query: 340 LLGRAGLLDRALKFIREMPIEPT 362
+ + G +++A + +P E +
Sbjct: 564 MYCKCGEMEKASVIFKHLPQESS 586
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
L F P +SS F+ + + + +HA +IK+G V GN L+++YAKS ++
Sbjct: 283 LSSYFYPPLXYFSSTFS---DSMNYPNSEVLHAKLIKNG--CVGIRGNHLLNLYAKSQNL 337
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E A K+F + + DV SW +++G A+ GL + F KM G+ PNQ T VL +C
Sbjct: 338 EQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSC 397
Query: 307 S 307
S
Sbjct: 398 S 398
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R VH +I D+ + ++I++ Y KCG L++A +F++ +++V W
Sbjct: 646 CASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLW 705
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD--KFGRQVHA 118
T++ISG + + Q A+ LF M+ G+ PN+ + VL A S AG ++ K+ R +
Sbjct: 706 TSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE 765
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGE 177
YG + ++D+Y R ++++ F+ SK W + ++ E
Sbjct: 766 V---YGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIE 822
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
+ ++L EP +F+++ +T + +W A I+S
Sbjct: 823 MGIWVCKKLLE--LEPFDAGPYILFSSICAT----EHRWEEAAKIRS 863
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/575 (41%), Positives = 348/575 (60%), Gaps = 16/575 (2%)
Query: 2 CTHLKKLKEARIVHAHI--------LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM 53
C + R++H H+ I + N++++ YAK G LD+A +LFD M
Sbjct: 82 CVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRM 141
Query: 54 PVKDMVTWTALISGYSQND-QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
P +++VTWT +++ + D + E A+ M R G+ PN +T SSVL A G
Sbjct: 142 PERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVL--- 198
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+HA +K G D +V+V SSL+D Y + +D +F + +++ V WN++IAG A+
Sbjct: 199 -AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 257
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+G A+ F M GF + +SV A LE G+ VHAHV+K L+ +
Sbjct: 258 SGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLI--L 315
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N L+DMY K GS+EDAE +F+R+ +RDV+SW++M++G AQ+G +R F+ M G+
Sbjct: 316 HNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGV 375
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRAL 351
APN++T + VL ACSHAGL+++G YF MKK G++PE H+ VDLLGRAG LD A+
Sbjct: 376 APNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAV 435
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
+FIR+M +EP A +W LLGACRMHK+ L AYAA I +L+P D G +LL+N YA
Sbjct: 436 EFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLR 495
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
+ DA ++ K M++ G+KKEP SW+E + VH+F+A D +HP I ++ + +I
Sbjct: 496 QWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRIS 555
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
+GYVP + VL +++E L+ HSEK+A+AF + G I I KN+R+CGDCH+
Sbjct: 556 ALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHA 615
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK R II+RD RFHHF+DG CSCGDYW
Sbjct: 616 FAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/617 (38%), Positives = 356/617 (57%), Gaps = 53/617 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD---- 57
C LK + + + VH + + + D+ + N +++AYAKCG ++ A K+F+ M KD
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 296
Query: 58 -------------------------------MVTWTALISGYSQNDQPENAIILFSQMLR 86
MVTWTA+I+GYSQ A+ +F QM+
Sbjct: 297 NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF 356
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY----------GYDWNVYVGSSLL 136
G PN T+ SVL A + + G ++HA+ LK G D ++ V ++L+
Sbjct: 357 SGSLPNCVTIISVLSACASLGAFSQ-GMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 415
Query: 137 DMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE--GFE 192
DMY++ A +F LE +N V+W +I GHA+ + AL+ F EM+ E G
Sbjct: 416 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 475
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P ++ S + A A ++ GK +HA+V++ FV N L++MY+K G ++ A
Sbjct: 476 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTAR 535
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF+ + ++ +SW SM+TG HG G + F+KM + G P+ +TFL VL ACSH G
Sbjct: 536 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 595
Query: 311 LLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
++D+G YF M +G+ P HY +DLL R G LD+A K +++MP+EPTA VW AL
Sbjct: 596 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 655
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L ACR+H NVEL +A ++ E++ + G + L++NIYA+AGR D AR R +MK+SG+K
Sbjct: 656 LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 715
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
K P CSWV+ + F D +HP I+ + ++IK +GYVP+++ L D++
Sbjct: 716 KRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEE 775
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+ L HSEKLALA+ L++T PG I I KN+RVCGDCHSAF + SK+V+ EI+VRD
Sbjct: 776 EKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDP 835
Query: 550 NRFHHFRDGFCSCGDYW 566
+RFHHF++G CSCG YW
Sbjct: 836 SRFHHFKNGSCSCGGYW 852
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 211/435 (48%), Gaps = 62/435 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C L + H I + F++++ + N ++ Y++CG L+EA +FDE+ + D+
Sbjct: 127 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 186
Query: 59 VTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQ-----FTLSSVLKASGAGATDDKF 112
++W +++S + ++ A+ LFS+M L + KP ++ ++L A G+ +
Sbjct: 187 ISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQ- 245
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL------ 166
++VH ++ G +V+VG++L+D YA+ M++A +F +E K+ VSWNA+
Sbjct: 246 TKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQ 305
Query: 167 -----------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
IAG++++ +AL F +M+ G P +
Sbjct: 306 SGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVT 365
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKS----------GGQLVAFVGNTLVDMYAKSGSIE 247
SV +A AS G+ QG +HA+ +K+ G V N L+DMY+K S +
Sbjct: 366 IISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFK 425
Query: 248 DAEKVFNR--LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLCVL 303
A +F+ L +R+VV+W M+ G AQ+G ++ F +M+ G+APN T C+L
Sbjct: 426 AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCIL 485
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEP 361
AC+H + G+ A + +H A++V +++ + G +D A M +
Sbjct: 486 MACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QK 544
Query: 362 TAAVWGALLGACRMH 376
+A W +++ MH
Sbjct: 545 SAISWTSMMTGYGMH 559
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 249/599 (41%), Gaps = 128/599 (21%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F + ++ ++ +Y CG D A + + + V W LI + + + ++AI +
Sbjct: 47 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+MLR G + + FTL VLKA G + G H G++ NV++ ++L+ MY+R
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGE-LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 143 DQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-PTH--- 195
+++A +F + + + +SWN++++ H + S AL FS+M E PT+
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 225
Query: 196 --FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S ++ A S ++ Q K VH + I++G L FVGN L+D YAK G +E+A KVF
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKAT----------------VRW-------------- 283
N + +DVVSWN+M+ G +Q G KA V W
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 284 -----FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG--------------------- 317
F +M+ +G PN VT + VL+AC+ G +G
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405
Query: 318 -----YFALMKKHG--------------VEPEEAHYVTFVDLLG---RAGLLDRALKFIR 355
Y AL+ + + EE + VT+ ++G + G + ALK
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 465
Query: 356 EMPIE-----PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL---LANIY 407
EM E P A +L AC + +G + +DS + + L N+Y
Sbjct: 466 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 525
Query: 408 ASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREIS 467
+ G ++ A M + + A SW M +A +I
Sbjct: 526 SKCGDVDTARHVFDSMSQ-----KSAISWTSMMTGYGMHGRGSEA-----------LDIF 569
Query: 468 EKIKQIGYVPDS----------SHV------LSYADQQEREAKLQVHSEKLALAFALIS 510
+K+++ G+VPD SH LSY D + L +E A A L++
Sbjct: 570 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLA 628
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/617 (38%), Positives = 356/617 (57%), Gaps = 53/617 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD---- 57
C LK + + + VH + + + D+ + N +++AYAKCG ++ A K+F+ M KD
Sbjct: 130 CGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 189
Query: 58 -------------------------------MVTWTALISGYSQNDQPENAIILFSQMLR 86
MVTWTA+I+GYSQ A+ +F QM+
Sbjct: 190 NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF 249
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY----------GYDWNVYVGSSLL 136
G PN T+ SVL A + + G ++HA+ LK G D ++ V ++L+
Sbjct: 250 SGSLPNCVTIISVLSACASLGAFSQ-GMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 308
Query: 137 DMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE--GFE 192
DMY++ A +F LE +N V+W +I GHA+ + AL+ F EM+ E G
Sbjct: 309 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 368
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P ++ S + A A ++ GK +HA+V++ FV N L++MY+K G ++ A
Sbjct: 369 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTAR 428
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF+ + ++ +SW SM+TG HG G + F+KM + G P+ +TFL VL ACSH G
Sbjct: 429 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 488
Query: 311 LLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
++D+G YF M +G+ P HY +DLL R G LD+A K +++MP+EPTA VW AL
Sbjct: 489 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 548
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L ACR+H NVEL +A ++ E++ + G + L++NIYA+AGR D AR R +MK+SG+K
Sbjct: 549 LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 608
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
K P CSWV+ + F D +HP I+ + ++IK +GYVP+++ L D++
Sbjct: 609 KRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEE 668
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+ L HSEKLALA+ L++T PG I I KN+RVCGDCHSAF + SK+V+ EI+VRD
Sbjct: 669 EKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDP 728
Query: 550 NRFHHFRDGFCSCGDYW 566
+RFHHF++G CSCG YW
Sbjct: 729 SRFHHFKNGSCSCGGYW 745
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 211/435 (48%), Gaps = 62/435 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C L + H I + F++++ + N ++ Y++CG L+EA +FDE+ + D+
Sbjct: 20 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 79
Query: 59 VTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQ-----FTLSSVLKASGAGATDDKF 112
++W +++S + ++ A+ LFS+M L + KP ++ ++L A G+ +
Sbjct: 80 ISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQ- 138
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL------ 166
++VH ++ G +V+VG++L+D YA+ M++A +F +E K+ VSWNA+
Sbjct: 139 TKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQ 198
Query: 167 -----------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
IAG++++ +AL F +M+ G P +
Sbjct: 199 SGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVT 258
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKS----------GGQLVAFVGNTLVDMYAKSGSIE 247
SV +A AS G+ QG +HA+ +K+ G V N L+DMY+K S +
Sbjct: 259 IISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFK 318
Query: 248 DAEKVFNR--LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLCVL 303
A +F+ L +R+VV+W M+ G AQ+G ++ F +M+ G+APN T C+L
Sbjct: 319 AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCIL 378
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEP 361
AC+H + G+ A + +H A++V +++ + G +D A M +
Sbjct: 379 MACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QK 437
Query: 362 TAAVWGALLGACRMH 376
+A W +++ MH
Sbjct: 438 SAISWTSMMTGYGMH 452
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 221/538 (41%), Gaps = 128/538 (23%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
MLR G + + FTL VLKA G + G H G++ NV++ ++L+ MY+R
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGE-LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 59
Query: 144 QMDDAWFLFTALESK---NEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-PTH---- 195
+++A +F + + + +SWN++++ H + S AL FS+M E PT+
Sbjct: 60 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 119
Query: 196 -FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN 254
S ++ A S ++ Q K VH + I++G L FVGN L+D YAK G +E+A KVFN
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKAT----------------VRW--------------- 283
+ +DVVSWN+M+ G +Q G KA V W
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 284 ----FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG---------------------- 317
F +M+ +G PN VT + VL+AC+ G +G
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299
Query: 318 ----YFALMKKHG--------------VEPEEAHYVTFVDLLG---RAGLLDRALKFIRE 356
Y AL+ + + EE + VT+ ++G + G + ALK E
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359
Query: 357 MPIE-----PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL---LANIYA 408
M E P A +L AC + +G + +DS + + L N+Y+
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISE 468
G ++ A M + + A SW M +A +I +
Sbjct: 420 KCGDVDTARHVFDSMSQ-----KSAISWTSMMTGYGMHGRGSEA-----------LDIFD 463
Query: 469 KIKQIGYVPDS----------SHV------LSYADQQEREAKLQVHSEKLALAFALIS 510
K+++ G+VPD SH LSY D + L +E A A L++
Sbjct: 464 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLA 521
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/622 (38%), Positives = 362/622 (58%), Gaps = 68/622 (10%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKC------------------------------- 40
R VH+ ++ + + + N++LN Y KC
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSV 99
G +D A LF+ MP + +V+W A+I+GY+QN A+ LFS+ML + P++FT++SV
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQ----- 144
L A A + + G+QVHA+ L+ +N V ++L+ YA+ DQ
Sbjct: 304 LSAC-ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362
Query: 145 ------------------MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
M+ A +F + +++ V+W A+I G+ + ++A+ F M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G EP ++ ++V + AS L+ GK +H I+S + + V N ++ MYA+SGS
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 482
Query: 247 EDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
A ++F+++ +++ ++W SM+ AQHG G+ V FE+MLR G+ P+++T++ VL+A
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
Query: 306 CSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSHAG ++EG+ Y+ +K +H + PE +HY VDLL RAGL A +FIR MP+EP A
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
WG+LL ACR+HKN EL AAE++ +DP++SG + +AN+Y++ GR +DAAR K K
Sbjct: 603 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 662
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
E V+KE SW ++ +H+F A+D HPQR ++ + E+IK G+VPD VL
Sbjct: 663 EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 722
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D + +E L HSEKLA+AF LISTP +T+ + KN+RVC DCH+A K SKV +REI
Sbjct: 723 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 782
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHFRDG CSC DYW
Sbjct: 783 IVRDATRFHHFRDGLCSCKDYW 804
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 66/422 (15%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ N++L+ +AK G L +AR +F EMP +D V+WT ++ G ++ + AI
Sbjct: 95 RRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-- 141
M G P QFTL++VL +S A GR+VH+F +K G V V +S+L+MY +
Sbjct: 155 MTADGFTPTQFTLTNVL-SSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG 213
Query: 142 -----------------------------FDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+MD A LF ++ ++ VSWNA+IAG+ +
Sbjct: 214 DSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQ 273
Query: 173 KSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
KAL+ FS ML E P F+ +SV +A A+ G++ GK VHA+++++ +
Sbjct: 274 NGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 333
Query: 232 VGNTLVDMYAKSGSIEDAEKV-------------FNRLLK-------------------- 258
V N L+ YAKSGS+E+A ++ F LL+
Sbjct: 334 VTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNN 393
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
RDVV+W +M+ G Q+G + F M+ G PN T VL+ C+ LD G+
Sbjct: 394 RDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQI 453
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
+ +E + + + R+G A + ++ W +++ A H
Sbjct: 454 HCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 513
Query: 379 VE 380
E
Sbjct: 514 GE 515
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 167/332 (50%), Gaps = 41/332 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--------- 52
C +L ++ + VHA+IL + + + N +++ YAK G ++ AR++ D+
Sbjct: 307 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 366
Query: 53 ------------------------MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
M +D+V WTA+I GY QN + + AI LF M+ G
Sbjct: 367 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL++VL + A D +G+Q+H ++ + + V ++++ MYAR A
Sbjct: 427 PEPNSYTLAAVLSVCASLACLD-YGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWA 485
Query: 149 WFLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + + E ++W ++I A+ +GE+A+ F EMLR G EP +Y V +A +
Sbjct: 486 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 545
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
G + +GK + IK+ Q+ + + +VD+ A++G +A++ R+ ++ D ++W
Sbjct: 546 AGFVNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAW 604
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
S+L+ C H + EK+L I PN
Sbjct: 605 GSLLSACRVHKNAELAELAAEKLL--SIDPNN 634
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
F N+L+ M+AKSG + DA VF + +RD VSW M+ G + G ++ M +
Sbjct: 99 FTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD 158
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G P Q T VL++C+ G+ + + K G+ + +++ G+ G + A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETA 218
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPHDS 397
MP+ ++ W A++ N LG AE +FE P S
Sbjct: 219 TTVFERMPVRSVSS-WNAMVSL-----NTHLGRMDLAESLFESMPDRS 260
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/572 (40%), Positives = 346/572 (60%), Gaps = 37/572 (6%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
T++ Y + G LD AR+ D M K +V W A+ISGY + A+ +F +M LG++
Sbjct: 229 TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQ 288
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY----GYDWNVYVGSSLLDMYARFDQMD 146
++FT +SVL A A A G+QVHA+ L+ D+++ V ++L +Y + ++D
Sbjct: 289 WDEFTYTSVLSAC-ANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVD 347
Query: 147 DAWFLFTALESKNEVSWNALIAGH-------------------------------ARKSE 175
+A +F + K+ VSWNA+++G+ A+
Sbjct: 348 EARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGF 407
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
GE++L+ F+ M EGFEP ++++ A A +L G+ +HA +++ G GN
Sbjct: 408 GEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNA 467
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+ MYAK G +E A +F + D VSWN+M+ QHG G + FE ML+ I P+
Sbjct: 468 LITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPD 527
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
++TFL VL+ CSHAGL++EG YF M +G+ P E HY +DLL RAG A I
Sbjct: 528 RITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMI 587
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
MP+EP +W ALL CR+H N++LG AAER+FEL P G ++LL+N+YA+ GR +
Sbjct: 588 ETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWD 647
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
D A+ RK+M++ GVKKEP CSW+E +N VH+F+ +D HP+ ++ E+ K++++G
Sbjct: 648 DVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLG 707
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
Y+PD+ VL + +++E L HSEKLA+ F L+ P G+T+ + KN+R+CGDCH+AFK
Sbjct: 708 YIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFK 767
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SKVVEREI+VRD RFHHF++G CSCG+YW
Sbjct: 768 FMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 209/490 (42%), Gaps = 113/490 (23%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE------------------ 52
AR VHAH++ S FK + N +++ Y K L A LFDE
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 53 ---------------MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
+ ++D V + A+I+GYS N+ AI LF +LR G +P+ FT +
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR---------FDQMDDA 148
SVL A D+K +Q+H +K G + V ++LL ++ + M A
Sbjct: 154 SVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGE------------------------------- 177
LF + ++E+SW +IAG+ R E +
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ----LVAFVG 233
+AL F +M G + F+Y+SV +A A+ G GK VHA+++++ + V
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN 333
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS--------------------------- 266
N L +Y K G +++A +VFN++ +D+VSWN+
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393
Query: 267 ----MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
M++G AQ+G G+ +++ F +M G P F + AC+ L G+ A +
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ G + + + + + G+++ A MP + + W A++ A H + G
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS-WNAMIAALGQHGH---G 509
Query: 383 AYAAERIFEL 392
A A E +FEL
Sbjct: 510 AQALE-LFEL 518
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 163/333 (48%), Gaps = 22/333 (6%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K+ EAR + D+ N IL+ Y G +DEA+ F+EMP ++++TWT +IS
Sbjct: 345 KVDEAR----QVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMIS 400
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G +QN E ++ LF++M G +P + + + A A GRQ+HA ++ G+D
Sbjct: 401 GLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIAC-AWLAALMHGRQLHAQLVRLGFD 459
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++ G++L+ MYA+ ++ A LF + + VSWNA+IA + G +AL F M
Sbjct: 460 SSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELM 519
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT----LVDMYAK 242
L+E P ++ +V + + G +E+G H + G G ++D+ +
Sbjct: 520 LKEDILPDRITFLTVLSTCSHAGLVEEG---HRYFKSMSGLYGICPGEDHYARMIDLLCR 576
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LG-KATVRWFEKMLRNGIAPNQV 297
+G +A+ + + ++ W ++L GC HG LG +A R FE M +
Sbjct: 577 AGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELM-----PQHDG 631
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
T++ + + G D+ LM+ GV+ E
Sbjct: 632 TYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKE 664
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA ++ F + ++ N ++ YAKCG ++ A LF MP D V+W
Sbjct: 437 CAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSW 496
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ Q+ A+ LF ML+ + P++ T +VL ++ R +
Sbjct: 497 NAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSG 556
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
YG + ++D+ R + +A + + + W AL+AG H G
Sbjct: 557 LYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGI 616
Query: 178 KALRTFSEMLRE 189
+A E++ +
Sbjct: 617 QAAERLFELMPQ 628
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/622 (38%), Positives = 362/622 (58%), Gaps = 68/622 (10%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCG------------------------------ 41
R VH+ ++ + + + N++LN Y KCG
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 42 -CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSV 99
+D A LF+ MP + +V+W A+I+GY+QN A+ LFS+ML + P++FT++SV
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQ----- 144
L A A + + G+QVHA+ L+ +N V ++L+ YA+ DQ
Sbjct: 304 LSAC-ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362
Query: 145 ------------------MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
M+ A +F + +++ V+W A+I G+ + ++A+ F M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G EP ++ ++V + AS L+ GK +H I+S + + V N ++ MYA+SGS
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSF 482
Query: 247 EDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
A ++F+++ +++ ++W SM+ AQHG G+ V FE+MLR G+ P+++T++ VL+A
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542
Query: 306 CSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSHAG ++EG+ Y+ +K +H + PE +HY VDLL RAGL A +FIR MP+EP A
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
WG+LL ACR+HKN EL AAE++ +DP++SG + +AN+Y++ GR +DAAR K K
Sbjct: 603 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 662
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
E V+KE SW ++ +H+F A+D HPQR ++ + E+IK G+VPD VL
Sbjct: 663 EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 722
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D + +E L HSEKLA+AF LISTP +T+ + KN+RVC DCH+A K SKV +REI
Sbjct: 723 DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 782
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHFRDG CSC DYW
Sbjct: 783 IVRDATRFHHFRDGLCSCKDYW 804
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 66/422 (15%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ N++L+ +AK G L +AR +F EMP +D V+WT ++ G ++ + AI
Sbjct: 95 RRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-- 141
M G P QFTL++VL +S A GR+VH+F +K G V V +S+L+MY +
Sbjct: 155 MTADGFTPTQFTLTNVL-SSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCG 213
Query: 142 -----------------------------FDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+MD A LF ++ ++ VSWNA+IAG+ +
Sbjct: 214 DAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQ 273
Query: 173 KSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
KAL+ FS ML E P F+ +SV +A A+ G++ GK VHA+++++ +
Sbjct: 274 NGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 333
Query: 232 VGNTLVDMYAKSGSIEDAEKV-------------FNRLLK-------------------- 258
V N L+ YAKSGS+E+A ++ F LL+
Sbjct: 334 VTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNN 393
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
RDVV+W +M+ G Q+G + F M+ G PN T VL+ C+ LD G+
Sbjct: 394 RDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQI 453
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
+ +E + + + R+G A + ++ W +++ A H
Sbjct: 454 HCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 513
Query: 379 VE 380
E
Sbjct: 514 GE 515
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 167/332 (50%), Gaps = 41/332 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--------- 52
C +L ++ + VHA+IL + + + N +++ YAK G ++ AR++ D+
Sbjct: 307 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 366
Query: 53 ------------------------MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
M +D+V WTA+I GY QN + + AI LF M+ G
Sbjct: 367 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL++VL + A D +G+Q+H ++ + + V ++++ MYAR A
Sbjct: 427 PEPNSYTLAAVLSVCASLACLD-YGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWA 485
Query: 149 WFLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + + E ++W ++I A+ +GE+A+ F EMLR G EP +Y V +A +
Sbjct: 486 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 545
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
G + +GK + IK+ Q+ + + +VD+ A++G +A++ R+ ++ D ++W
Sbjct: 546 AGFVNEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAW 604
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
S+L+ C H + EK+L I PN
Sbjct: 605 GSLLSACRVHKNAELAELAAEKLL--SIDPNN 634
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 44/222 (19%)
Query: 214 GKWVHAHVIKSG--------GQLVAFVG-----------------------------NTL 236
G+ +HA +K+G L+++ G N+L
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ M+AKSG + DA VF + +RD VSW M+ G + G ++ M +G P Q
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T VL++C+ G+ + + K G+ + +++ G+ G + A
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPHDS 397
MP+ ++ W A++ N LG AE +FE P S
Sbjct: 225 MPVRSVSS-WNAMVSL-----NTHLGRMDLAESLFESMPGRS 260
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/572 (41%), Positives = 351/572 (61%), Gaps = 11/572 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN---AYAKCGCLDEARKLFDEMPVKD 57
KCT L +LK+ + A+ + + ++DI++ ++N +D A LFD++ KD
Sbjct: 38 KCTSLNELKQ---IQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKD 94
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++ + + GY++++ P A LF ++L GL P+ +T SS+LKA A + + G +H
Sbjct: 95 IILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKAC-ASSKALREGMGLH 153
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
F +K G + N+Y+ +L++MYA + M+ A +F +E VS+NA+I G+AR S+
Sbjct: 154 CFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPN 213
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F E+ EPT + SV + A G+L+ GKW+H +V K G V L+
Sbjct: 214 EALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALI 273
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DM+AK GS+ DA +F + RD +W++M+ A HG G + FE+M R G+ P+++
Sbjct: 274 DMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEI 333
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TFL +L ACSHAGL+++G+GYF ++ K +G+ P HY VDLLGRAG LD A F+ +
Sbjct: 334 TFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDK 393
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+ I+ T +W LL AC H NVE+ ERIFELD G +++L+N+YA GR D
Sbjct: 394 LEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDV 453
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
RK+MK+ GV K P CS VE N VH F + D H + + E+ ++IK +GYV
Sbjct: 454 NHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYV 513
Query: 477 PDSSHVLSYADQQE--REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
PD+S V +AD +E +E L+ HSEKLA+AF L++TPPG+TI + KN+R+CGDCH+A K
Sbjct: 514 PDTSLVY-HADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAK 572
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + R+I++RD RFH F DG CSCGD+W
Sbjct: 573 LISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/603 (41%), Positives = 359/603 (59%), Gaps = 42/603 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-LDE-ARKLFDEMPVKDMV 59
CTH+ ++K+ VHAHI + + +L K +D R +F ++ +
Sbjct: 49 CTHINQVKQ---VHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPF 105
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA- 118
WTALI GY+ +++L++ M R G+ P FT +++LKA A A D GRQVH
Sbjct: 106 LWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSA-ALDVNLGRQVHTQ 164
Query: 119 FCLKYGYDWNVYVGSSLLDMYAR----------FDQMDD----AWF-------------- 150
L G+ ++YVG++L+DMY + FD+M D +W
Sbjct: 165 TILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEA 224
Query: 151 ---LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
LF L K+ V+W A++ G+A+ + +AL F M G + + V +A A
Sbjct: 225 ASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQ 284
Query: 208 TGSLEQGKWVHAHVIKSGGQLVA--FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G+ + WV +SG + VG+ L+DMYAK GS+EDA KVF R+ +R+V S++
Sbjct: 285 LGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYS 344
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
SM+ G A HGL A + F++ML+ I PN+VTF+ VLTACSHAG++++GQ FA+M++
Sbjct: 345 SMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEEC 404
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
HGV P E HY VDLLGRAG L+ AL ++ MP+ P VWGALLGACR+H N ++
Sbjct: 405 HGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQI 464
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA-V 443
AA +FEL+P+ G +ILL+NIYASAGR +D ++ RK+M+ G+KK P CSWVE K +
Sbjct: 465 AASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGII 524
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F A D +HP+ I + ++ +++K +GY P+ S V +E++ L HSEKLA
Sbjct: 525 HEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLA 584
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
LAF L++T G TI I KN+R+C DCHS AS++ REI+VRD RFHHFRDG CSCG
Sbjct: 585 LAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCG 644
Query: 564 DYW 566
++W
Sbjct: 645 NFW 647
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 167/411 (40%), Gaps = 80/411 (19%)
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
++ Q L S L + G T +QVHA + G + +V + LL + D D
Sbjct: 31 VRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDP 90
Query: 149 W--FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+ +F +E N W ALI G+A + +++ ++ M R+G P F+++++ A +
Sbjct: 91 YPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS 150
Query: 207 STGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+ + G+ VH I GG +VGNTL+DMY K G + +VF+ +L RDV+SW
Sbjct: 151 AALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWT 210
Query: 266 S-------------------------------MLTGCAQHGLGKATVRWFEKMLRNGIAP 294
S M+TG AQ+ + + FE+M G+
Sbjct: 211 SLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKT 270
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALK 352
++VT + V++AC+ G + ++ G P V +D+ + G ++ A K
Sbjct: 271 DEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYK 330
Query: 353 FIREM----------------------------------PIEPTAAVWGALLGACRMHKN 378
M I+P + +L AC
Sbjct: 331 VFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGM 390
Query: 379 VELGAYAAERIFEL--DPHDSGP----HILLANIYASAGRLNDAARARKMM 423
VE G +++F + + H P + + ++ AGRL +A KMM
Sbjct: 391 VEQG----QQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM 437
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 9/237 (3%)
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED--AEKVFNRL 256
S + + L + Q K VHAH+ + G + FV L+ K D VF ++
Sbjct: 40 SRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQV 99
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG- 315
+ W +++ G A G +V + M R GI P TF +L ACS A ++ G
Sbjct: 100 EYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGR 159
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
Q + + G + T +D+ + G L + EM ++ W +L+ A
Sbjct: 160 QVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLIVAYAK 218
Query: 376 HKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
N+E AA +F+ P D + YA R +A + M+ +GVK +
Sbjct: 219 VGNME----AASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTD 271
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/599 (39%), Positives = 351/599 (58%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + +H +L D+ + N ++ Y +C C++ AR +FD+M +D+V+W
Sbjct: 134 CGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSW 193
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I S+N + + A+ L +M + ++P++ + S++ A + + G+ +HA+ +
Sbjct: 194 STMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLF-ADTANMRMGKAMHAYVI 252
Query: 122 KYGYD--WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE-- 177
+ + V ++LLDMYA+ + A LF L K VSW A+IAG R + E
Sbjct: 253 RNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEA 312
Query: 178 -----------------------------KALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+A F +M G PT + S+ + A
Sbjct: 313 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 372
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
G+L+ GKWVH+++ K ++ + LVDMYAK G I A ++F + RD+ WN+++
Sbjct: 373 GALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII 432
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGV 327
TG A HG G+ + F +M R G+ PN +TF+ +L ACSHAGL+ EG+ F ++ G+
Sbjct: 433 TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 492
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY VDLLGRAGLLD A + I+ MPI+P VWGAL+ ACR+HKN +LG AA
Sbjct: 493 VPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAAT 552
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
++ E++P + G ++L++NIYA+A R +DAA RK MK G+KKEP S +E VH F+
Sbjct: 553 QLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFL 612
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D +HPQ I++ E+ K+ + GYVPD+S VL D++E+E L HSEKLA+AF
Sbjct: 613 MGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFG 672
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST P + I I KN+RVC DCH+A K SK+ R IIVRD NRFHHFR+G+CSCGDYW
Sbjct: 673 LISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 192/405 (47%), Gaps = 52/405 (12%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L++ + +HAHI+ + F + + + LN + G A+ W +
Sbjct: 53 LSTLEQTKQIHAHIIKTHFHHALQIP---LNDFPS-GLSPSAQ-------------WNFV 95
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ Y++ +QP NA+ +++Q+ ++ + + F SVLKA G + + G+++H F LK G
Sbjct: 96 ITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQ-VSWTQLGKEIHGFVLKKG 154
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D +V+VG++L+ MY ++ A +F + ++ VSW+ +I +R E + AL
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIR 214
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT--LVDMYAK 242
EM P+ + S+ A T ++ GK +HA+VI++ V T L+DMYAK
Sbjct: 215 EMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK 274
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGC------------------------------- 271
G + A ++FN L ++ VVSW +M+ GC
Sbjct: 275 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAY 334
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
AQ F++M +G+ P +VT + +L+ C+ AG LD G+ + + K VE +
Sbjct: 335 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 394
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
VD+ + G ++ A + E I +W A++ MH
Sbjct: 395 ILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMH 438
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN +I + ++++ AL ++++ + FE +F SV A + GK +H V+
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K G FVGN L+ MY + +E A VF+++++RDVVSW++M+ +++ +
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH------GVEPEEAHYVT 336
+M + P++V + ++ + + G+ A + ++ GV A
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTA---- 267
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE-LDPH 395
+D+ + G L A + + + T W A++ C +E A +F+
Sbjct: 268 LLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIRSNRLE----EARALFDSTQNR 322
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
D + + YA A ++ A M+ SGV+
Sbjct: 323 DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 356
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/504 (45%), Positives = 326/504 (64%), Gaps = 4/504 (0%)
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
SGY + N I ++S+ML + PN+FT +++A ++ G+Q+HA LK+G+
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEE-GKQIHAHVLKFGF 125
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTF 183
+ + ++L+ MY F ++ A +F + +N VSWNA+IA + + + +A F
Sbjct: 126 GADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALF 185
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
M E F +S+ +A G+LEQGKW+H ++ KSG +L + + T++DMY K
Sbjct: 186 DRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 245
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G +E A +VFN L ++ + SWN M+ G A HG G+A + F++M R +AP+ +TF+ VL
Sbjct: 246 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVL 305
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+AC+H+GL++EG+ YF M + G++P H+ VDLLGRAGLL+ A K I EMP+ P
Sbjct: 306 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD 365
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
A V GAL+GACR+H N ELG +++ EL+PH+SG ++LLAN+YASAGR D A+ RK+
Sbjct: 366 AGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKL 425
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M + GVKK P S +E+++ V F+A AHPQ I+ K EI E I+ IGYVPD+ V
Sbjct: 426 MNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGV 485
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D++E+E L HSEKLA+AF L+ T PG T+ I KN+R+C DCH A K SKV +R
Sbjct: 486 LHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDR 545
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EII+RD NRFHHFR G CSC DYW
Sbjct: 546 EIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 145/273 (53%), Gaps = 7/273 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM--VTWTALI 65
++E + +HAH+L F D N +++ Y L++AR++FD MP +D V+W A+I
Sbjct: 110 IEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMI 169
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYG 124
+ Y Q+++ A LF +M + ++F +S+L A +G GA + G+ +H + K G
Sbjct: 170 AAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ--GKWIHGYIEKSG 227
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + + ++++DMY + ++ A +F L K SWN +I G A +GE A+ F
Sbjct: 228 IELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 287
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKS 243
EM RE P ++ +V +A A +G +E+GK ++ + G +VD+ ++
Sbjct: 288 EMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRA 347
Query: 244 GSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
G +E+A K+ N + + D +++ C HG
Sbjct: 348 GLLEEARKLINEMPVNPDAGVLGALVGACRIHG 380
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L L++ + +H +I S + D + T+++ Y KCGCL++A ++F+E+P K + +W
Sbjct: 207 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 266
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
+I G + + + E AI LF +M R + P+ T +VL A
Sbjct: 267 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 307
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/554 (39%), Positives = 351/554 (63%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + D + T+++ Y+K G ++EA LF D+ +W A++ GY +
Sbjct: 1030 IHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGD 1089
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ L+ M G + NQ TL++ KA+G G K G+Q+ A +K G++ +++V S
Sbjct: 1090 FPKALRLYILMQESGERANQITLANAAKAAG-GLVGLKQGKQIQAVVVKRGFNLDLFVIS 1148
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LDMY + +M+ A +F + S ++V+W +I+G + E AL T+ M +P
Sbjct: 1149 GVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQP 1208
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++++++ A + +LEQG+ +HA+ +K FV +LVDMYAK G+IEDA +F
Sbjct: 1209 DEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1268
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
R + SWN+M+ G AQHG + +++FE+M G+ P++VTF+ VL+ACSH+GL+
Sbjct: 1269 KRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVS 1328
Query: 314 EG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + ++++ K +G+EPE HY VD L RAG + A K I MP E +A+++ LL A
Sbjct: 1329 EAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNA 1388
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+ + E G AE++ L+P DS ++LL+N+YA+A + + A AR MM+++ VKK+P
Sbjct: 1389 CRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDP 1448
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWV+ KN VH+FVA D +H + +I+ K I ++I++ GY+PD+ L +++++E
Sbjct: 1449 GFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKE 1508
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+A+ L+ TPP +T+ + KN+RVCGDCH+A K+ SKV ERE+++RD NRF
Sbjct: 1509 CSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRF 1568
Query: 553 HHFRDGFCSCGDYW 566
HHFR G CSCGDYW
Sbjct: 1569 HHFRSGVCSCGDYW 1582
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 195/376 (51%), Gaps = 1/376 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ + +H ++ S +++ N ++N Y K G + AR +F +M D+V+W +
Sbjct: 919 LNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTM 978
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISG + + E ++ +F +LR GL P+QFT++SVL+A + Q+HA +K G
Sbjct: 979 ISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAG 1038
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +V ++L+D+Y++ +M++A FLF + + SWNA++ G+ + KALR +
Sbjct: 1039 VVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYI 1098
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G + ++ A L+QGK + A V+K G L FV + ++DMY K G
Sbjct: 1099 LMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCG 1158
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+E A ++FN + D V+W +M++GC ++G + + + M + + P++ TF ++
Sbjct: 1159 EMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVK 1218
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS L++G+ A K + + VD+ + G ++ A + A+
Sbjct: 1219 ACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIAS 1278
Query: 365 VWGALLGACRMHKNVE 380
W A++ H N E
Sbjct: 1279 -WNAMIVGLAQHGNAE 1293
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 195/409 (47%), Gaps = 38/409 (9%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A +H + + + D+ + ++N YAK G + EAR LFD M ++D+V W ++ Y
Sbjct: 746 AESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVD 805
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-RQVHAFCLKYGYDWNV 129
A++LFS+ R GL+P+ TL ++ + + ++ +Q+ A+ K
Sbjct: 806 TGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTK------- 858
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
L MY D D ++WN ++ ++ E +A+ F +M+
Sbjct: 859 ------LFMYDDDDDGSDV------------IAWNKTLSWFLQRGETWEAVDCFVDMINS 900
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
++ + + +A LE GK +H V++SG V VGN L++MY K+GS+ A
Sbjct: 901 RVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRA 960
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH- 308
VF ++ + D+VSWN+M++GCA GL + +V F +LR G+ P+Q T VL ACS
Sbjct: 961 RTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSL 1020
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA-LKFIREMPIEPTAAVWG 367
G A K GV + T +D+ ++G ++ A F+ + + A W
Sbjct: 1021 GGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFD--LASWN 1078
Query: 368 ALLGACRMHKNVELGAYA-AERIFEL--DPHDSGPHILLANIYASAGRL 413
A+ MH + G + A R++ L + + I LAN +AG L
Sbjct: 1079 AM-----MHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGL 1122
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 164/363 (45%), Gaps = 29/363 (7%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMVTWTALISGYSQND 72
HA IL S D + N ++ Y+KCG L ARKLFD P +D+VTW A++S ++ D
Sbjct: 649 HARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA--D 706
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ + LF + R + + TL+ V K A+ +H + +K G W+V+V
Sbjct: 707 KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSA-AESLHGYAVKIGLQWDVFVA 765
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+L+++YA+F ++ +A LF + ++ V WN ++ + +AL FSE R G
Sbjct: 766 GALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLR 825
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P + ++ + S ++ + + QL A+ + GS
Sbjct: 826 PDDVTLCTLARVVKSKQNVLEWQL---------KQLKAYGTKLFMYDDDDDGS------- 869
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
DV++WN L+ Q G V F M+ + +A + +TF+ +L+ + L
Sbjct: 870 -------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCL 922
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ G+ ++ + G++ + +++ + G + RA +M E W ++
Sbjct: 923 ELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-EVDLVSWNTMISG 981
Query: 373 CRM 375
C +
Sbjct: 982 CAL 984
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF--TALESKNEVSWN 164
A+D G++ HA L G+ + ++ ++L+ MY++ + A LF T S++ V+WN
Sbjct: 639 ASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWN 698
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
A+++ HA K+ F + R T + + VF + S + +H + +K
Sbjct: 699 AILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKI 756
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
G Q FV LV++YAK G I +A +F+ + RDVV WN M+ GL + F
Sbjct: 757 GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLF 816
Query: 285 EKMLRNGIAPNQVTFLCVL 303
+ R G+ P+ VT LC L
Sbjct: 817 SEFNRTGLRPDDVT-LCTL 834
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L++ R +HA+ + D + ++++ YAKCG +++AR LF + +W
Sbjct: 1220 CSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASW 1279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G +Q+ E A+ F +M G+ P++ T VL A + ++
Sbjct: 1280 NAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQK 1339
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG + + S L+D +R ++ +A
Sbjct: 1340 IYGIEPEIEHYSCLVDALSRAGRIREA 1366
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 180 LRTFSEMLREGFEPTHFSYS-----SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
LR + P H +S S+ + L GK HA ++ SG F+ N
Sbjct: 606 LRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTN 665
Query: 235 TLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSMLTGCAQHG-----LGKATVRWFEKM 287
L+ MY+K GS+ A K+F+ RD+V+WN++L+ A L + R F
Sbjct: 666 NLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSA 725
Query: 288 LRNGIAPNQVTFLCVLTACSHA 309
R+ +AP V +C+L+A A
Sbjct: 726 TRHTLAP--VFKMCLLSASPSA 745
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/616 (39%), Positives = 360/616 (58%), Gaps = 54/616 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R VH + S +D+ + N +++ YAKCG ++EA K+F M KD+V+W
Sbjct: 374 CASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSW 433
Query: 62 TALISGYSQNDQPENAIILFS-----------------------------------QMLR 86
A+++GYSQ + E+A+ LF QM
Sbjct: 434 NAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCD 493
Query: 87 LGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKY---------GYDWNVYVGSSLL 136
G +PN TL S+L A GA G++ H + +K+ G D ++ V + L+
Sbjct: 494 CGSRPNVVTLVSLLSACVSVGAL--LHGKETHCYAIKFILNLDGPDPGAD-DLKVINGLI 550
Query: 137 DMYARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLR--EGFE 192
DMYA+ + A +F ++ K+ V+W +I G+A+ + AL+ FS M + + +
Sbjct: 551 DMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIK 610
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKS-GGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P F+ S A A +L G+ VHA+V+++ G ++ FV N L+DMY+KSG ++ A+
Sbjct: 611 PNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQI 670
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF+ + +R+ VSW S++TG HG G+ +R F++M + + P+ +TFL VL ACSH+G+
Sbjct: 671 VFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGM 730
Query: 312 LDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+D G +F M K GV+P HY VDL GRAG L A+K I EMP+EPT VW ALL
Sbjct: 731 VDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALL 790
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
ACR+H NVELG +AA R+ EL+ + G + LL+NIYA+A R D AR R MK +G+KK
Sbjct: 791 SACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKK 850
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CSW++ + V F D +HPQ I++ ++ ++IK IGYVP +S L D +E
Sbjct: 851 RPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEE 910
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ L HSEKLALA+ +++ P + I I KN+R+CGDCHSA + SK++E EII+RD++
Sbjct: 911 KGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSS 970
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF++G CSC YW
Sbjct: 971 RFHHFKNGSCSCKGYW 986
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 193/460 (41%), Gaps = 55/460 (11%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK--DMVTWTALI 65
L A+++H + +A ++ Y A L + +P + W LI
Sbjct: 174 LAHAKLLHQQSIMQGLLFHLA--TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLI 231
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
P + L+ QM LG P+ +T V KA A + G +HA + G+
Sbjct: 232 RRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKAC-ANLSSLSLGASLHATVSRSGF 290
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGEKALRT 182
NV+V ++++ MY + + A +F L + + VSWN++++ + S+ AL
Sbjct: 291 ASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALAL 350
Query: 183 FSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M R P S ++ A AS + +G+ VH I+SG FVGN +VDMYA
Sbjct: 351 FHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYA 410
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E+A KVF R+ +DVVSWN+M+TG +Q G + + FE+M I + VT+
Sbjct: 411 KCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTA 470
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
V+T + G E F M G P + VT V LL
Sbjct: 471 VITGYAQRGQGCEALDVFRQMCDCGSRP---NVVTLVSLLS------------------- 508
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL-----LANIYASAGRLNDA 416
GALL H YA + I LD D G L L ++YA +
Sbjct: 509 ACVSVGALLHGKETH------CYAIKFILNLDGPDPGADDLKVINGLIDMYA---KCQST 559
Query: 417 ARARKMMKESGVKKEPACSWV----------ETKNAVHMF 446
ARKM K +W + NA+ +F
Sbjct: 560 EVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLF 599
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/568 (39%), Positives = 350/568 (61%), Gaps = 6/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + VHA + + +DI + +++ Y CG ++ AR++FD M V+D+V+W
Sbjct: 269 CWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSW 328
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I GY++N E+A LF+ M G++P++ T ++ A A + R++H+
Sbjct: 329 TVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNH-AREIHSQVD 387
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ ++ V ++L+ MYA+ + DA +F A+ ++ VSW+A+I + G +A
Sbjct: 388 IAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFE 447
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV--GNTLVDM 239
TF M R EP +Y ++ A G+L+ G ++ IK+ LV+ V GN L+ M
Sbjct: 448 TFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA--DLVSHVPLGNALIIM 505
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
AK GS+E A +F+ +++RDV++WN+M+ G + HG + + F++ML+ PN VTF
Sbjct: 506 NAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTF 565
Query: 300 LCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACS AG +DEG+ +F L++ G+ P Y VDLLGRAG LD A I+ MP
Sbjct: 566 VGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMP 625
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++PT+++W +LL ACR+H N+++ AAER +DP+D ++ L+++YA+AG + A+
Sbjct: 626 VKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAK 685
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M+ G++KE C+W+E VH FV D +HP I+ + + IK+ GY+P
Sbjct: 686 VRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPI 745
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ +VL +Q++E + HSEKLA+A+ ++S P G+ I I KN+RVC DCHSA KF SK
Sbjct: 746 TQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISK 805
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REII RD +RFHHF+DG CSCGDYW
Sbjct: 806 VTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 196/372 (52%), Gaps = 2/372 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+CT L+ + V HI+ + +I NT++ Y+ CG + EAR++FD + K +VT
Sbjct: 66 RCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVT 125
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W ALI+GY+Q + A LF QM+ GL+P+ T SVL A + A + +G++VHA
Sbjct: 126 WNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN-WGKEVHAQV 184
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+ + +G++L+ MY + MDDA +F L ++ ++N ++ G+A+ + EKA
Sbjct: 185 VTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAF 244
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M + G +P S+ S+ + +L GK VHA + +G V +L+ MY
Sbjct: 245 ELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMY 304
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
GSIE A +VF+ + RDVVSW M+ G A++G + F M GI P+++T++
Sbjct: 305 TTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYM 364
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ AC+ + L+ + + + G + V + + G + A + MP
Sbjct: 365 HIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR 424
Query: 361 PTAAVWGALLGA 372
+ W A++GA
Sbjct: 425 DVVS-WSAMIGA 435
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 173/362 (47%), Gaps = 17/362 (4%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D G+QV ++ G N+Y ++L+ +Y+ + +A +F ++E+K V+WNALIA
Sbjct: 72 DAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIA 131
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
G+A+ ++A F +M+ EG EP+ ++ SV A +S L GK VHA V+ +G
Sbjct: 132 GYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVS 191
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
+G LV MY K GS++DA +VF+ L RDV ++N M+ G A+ G + F +M
Sbjct: 192 DFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQ 251
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
+ G+ PN+++FL +L C L G+ A G+ + + + + G ++
Sbjct: 252 QVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIE 311
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANI 406
A + M + + W ++ + N+E G +A + + P D ++ + N
Sbjct: 312 GARRVFDNMKVRDVVS-WTVMIEGYAENGNIEDAFGLFATMQEEGIQP-DRITYMHIMNA 369
Query: 407 YASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND---------DAHPQRA 457
A + LN A + +G + S VHM+ DA P+R
Sbjct: 370 CAISANLNHAREIHSQVDIAGFGTDLLVS----TALVHMYAKCGAIKDARQVFDAMPRRD 425
Query: 458 MI 459
++
Sbjct: 426 VV 427
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y +F GK V H+I+ G QL + NTL+ +Y+ G++ +A ++F+ +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+ VV+WN+++ G AQ G K F +M+ G+ P+ +TFL VL ACS L+ G+
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
A + G + V + + G +D A + + I +
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTF----------- 227
Query: 377 KNVELGAYAA----ERIFEL 392
NV +G YA E+ FEL
Sbjct: 228 -NVMVGGYAKSGDWEKAFEL 246
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/568 (41%), Positives = 346/568 (60%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C +LK L AR +H+ +L F + + +++AY K G LD+A +F M +++V+
Sbjct: 268 CANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVS 327
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+I G QN A LFS+M G+ PN T S++L S A F Q+HA
Sbjct: 328 WTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEA-----SFPPQIHAQV 382
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K Y+ VG++L+ Y++ ++A +F ++ K+ VSW+A++ +A+ + A
Sbjct: 383 IKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGAT 442
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M G +P F+ SS A AS + ++ G+ HA IK V + LV M
Sbjct: 443 NAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSM 502
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ GSIE+A+ VF R RD++SWNSML+G AQHG + + F +M GI + +TF
Sbjct: 503 YARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTF 562
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L V+ C+HAGL++EGQ YF LM + +G+ P HY VDL RAG LD + I MP
Sbjct: 563 LSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMP 622
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+W ALLGACR+HKNVELG AAE++ L+P DS ++LL+NIY++AG+ +
Sbjct: 623 FPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDE 682
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+M V+KE CSW++ KN VH F+A+D +HP I+ K R ++ K+KQ GY PD
Sbjct: 683 VRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPD 742
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S V + ++EA L +HSE+LALAF LI+TPP + +HI KN+RV GD H+ K S+
Sbjct: 743 TSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSE 802
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +REI++RD RFHHF+ G CSCGD+W
Sbjct: 803 IEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 154/280 (55%), Gaps = 2/280 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DI + ++++ Y + + RK+F+ M +++VTWT+L++GY Q + + LF +M
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ PN FT SSVL + D G+ VHA +K+G V+V +SL++MYA+ +
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVD-LGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLV 208
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
++A +F +E+++ VSWN L+AG +AL+ F + T +YS+V
Sbjct: 209 EEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLC 268
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL-KRDVVSW 264
A+ L + +H+ V+K G V L+D Y K+G ++ A VF + ++VVSW
Sbjct: 269 ANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSW 328
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+M+ GC Q+G F +M +G+APN +T+ +LT
Sbjct: 329 TAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 4/304 (1%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYD-WNVYVGSSLLDMYARFDQMDDAWFLFTA 154
L ++K G+ D G+Q+HA C++ G+D ++ VG+SL+DMY + + D +F
Sbjct: 58 LLGIIKICGS-VPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEG 116
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ +N V+W +L+ G+ + + F M EG P F++SSV + +AS G ++ G
Sbjct: 117 MLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG 176
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ VHA IK G FV N+L++MYAK G +E+A VF R+ RD+VSWN+++ G +
Sbjct: 177 QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLN 236
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
G ++ F + + T+ V+ C++ L + + + KHG
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM 296
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE--L 392
+D +AG LD+AL M W A++ C + ++ L A R+ E +
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356
Query: 393 DPHD 396
P+D
Sbjct: 357 APND 360
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 352/566 (62%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + EA+ H I+ + D+ + N ++NAY+KCG ++ AR++FD M + +V+W
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I Y++N A+ +F +M G K ++FT+SSVL A G D +++H +
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC-DALECKKLHCLSV 189
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D N+YVG++LLD+YA+ + DA +F +++ K+ V+W++++AG+ + E+AL
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ R E F+ SSV A ++ +L +GK +HA + KSG FV ++ VDMYA
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ ++ +F+ + ++++ WN++++G A+H K + FEKM ++G+ PN+VTF
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 369
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ C H GL++EG+ +F LM+ +G+ P HY VD+LGRAGLL A + I+ +P +
Sbjct: 370 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 429
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA++WG+LL +CR++KN+EL AAE++FEL+P ++G H+LL+NIYA+ + + A++R
Sbjct: 430 PTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSR 489
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K++++ VKK SW++ K+ VH F + HP+ I + K ++ GY P
Sbjct: 490 KLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVE 549
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
H L + ++E L HSEKLAL F L+ P S + I KN+R+C DCH K AS
Sbjct: 550 HELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMAT 609
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHF DG CSCGD+W
Sbjct: 610 RRFIIVRDVNRFHHFSDGHCSCGDFW 635
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/566 (41%), Positives = 340/566 (60%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L R V A+ F D + N++++ YA CG + A LF + VK ++ W
Sbjct: 181 CSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAW 240
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY +N + + +F ML + ++ TL SV A G D G+ + +
Sbjct: 241 NAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLG-DANLGQWIAEYAE 299
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + ++L+DMYA+ ++D A LF + S++ V+W+A+I+G+ + +AL
Sbjct: 300 EKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALA 359
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EM P + SV +A A G+LE GKWVH+++ + L +G LVD YA
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYA 419
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+DA K F + R+ +W +++ G A +G + + F ML I P VTF+
Sbjct: 420 KCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIG 479
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH L++EG+ +F M + +G+ P HY VDLLGRAGL+D A +FIR MPIE
Sbjct: 480 VLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIE 539
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VW ALL AC +HKNVE+G A ++I LDP SG +ILL+N YAS G+ +AA R
Sbjct: 540 PNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVR 599
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MKE GV+K P CS +E + + F A D HPQ I++K E+ E IK +GY+P+++
Sbjct: 600 KEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTA 659
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
D+ E++ + HSEKLA+AF L+ + PG+TI + KN+RVC DCHSA K SKV
Sbjct: 660 DARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVY 719
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHHF+DG CSC DYW
Sbjct: 720 NREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 161/318 (50%), Gaps = 3/318 (0%)
Query: 54 PVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKF 112
P + ++ LI + + PE+A+ LF +ML + P+Q T+++ +K S + D
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVK-SCSRMCDLSV 189
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
GR V A+ K G+ + +V +SL+ MYA + A LF ++ K ++WNA+IAG+ +
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVK 249
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ ++ + F ML + SV TA G G+W+ + + G +
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
LVDMYAK G ++ A ++F+R+ RDVV+W++M++G Q + + F +M +
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN VT + VL+AC+ G L+ G+ + +++ + VD + G + A+K
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429
Query: 353 FIREMPIEPTAAVWGALL 370
MP+ T W AL+
Sbjct: 430 AFESMPVRNT-WTWTALI 446
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/601 (39%), Positives = 351/601 (58%), Gaps = 37/601 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + A+ VH + F +D+ + N +++ Y KC C + AR +F+ MP +D+++W
Sbjct: 88 CASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISW 147
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ S Y A+ F +M G +PN T+SS+L A D K GR+VH F +
Sbjct: 148 TSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPAC-TDLKDLKSGREVHGFVV 206
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G NV+V S+L++MYA + A +F ++ ++ VSWN LI + E EK L
Sbjct: 207 RNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLS 266
Query: 182 TFSEMLREG-----------------------------------FEPTHFSYSSVFTALA 206
F M+ EG F+P + +SV A
Sbjct: 267 VFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACT 326
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ SL GK +H ++ + LV MYAK G +E + +VF+ + KRD VSWN+
Sbjct: 327 NLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNT 386
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-H 325
M+ + HG G+ + F +M+ +G+ PN VTF VL+ CSH+ L+DEG F M + H
Sbjct: 387 MIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDH 446
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
VEP+ H+ VD+L RAG L+ A +FI++MPIEPTA WGALLG CR++KNVELG A
Sbjct: 447 SVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIA 506
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A R+FE++ + G ++LL+NI SA ++A+ RK+M++ GV K P CSW++ +N VH
Sbjct: 507 ANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHT 566
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
FV D ++ Q I++ + EK++ GY+P++ VL DQ+E+E L HSEKLA+A
Sbjct: 567 FVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVA 626
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F +++ S+I + KN+R+CGDCH+A KF +K+V +IIVRD+ RFHHFRDG CSC D+
Sbjct: 627 FGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDF 686
Query: 566 W 566
W
Sbjct: 687 W 687
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 176/383 (45%), Gaps = 38/383 (9%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPN 92
+ Y+ G L AR LFD++P D+ TWT LIS +++ + AI ++ + ++P+
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+ L SV KA A D ++VH +++G+ +V +G++L+DMY + + A +F
Sbjct: 78 KLLLLSVAKAC-ASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ ++ +SW ++ + + +AL F +M G P + SS+ A L+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT--- 269
G+ VH V+++G FV + LV+MYA SI A+ VF+ + +RD VSWN ++T
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 270 --------------------------------GCAQHGLGKATVRWFEKMLRNGIAPNQV 297
GC Q+G + + +M +G PNQ+
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T VL AC++ L G+ + +H + V + + G L+ + + M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376
Query: 358 PIEPTAAVWGALLGACRMHKNVE 380
T + W ++ A MH N E
Sbjct: 377 TKRDTVS-WNTMIIATSMHGNGE 398
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/570 (40%), Positives = 342/570 (60%), Gaps = 9/570 (1%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVTWT 62
+ L+ + +H + F D+ + IL+ Y KC C+D AR++FD M VK+ VTW+
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS----GAGATDDKFGRQVHA 118
A++ Y D A+ LF Q+L L K + LS+V A+ A TD G +H
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLML--KDDVIVLSAVTLATVIRVCANLTDLSTGTCLHC 349
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ +K G+ ++ VG++LL MYA+ ++ A F ++ ++ VS+ A+I+G+ + E+
Sbjct: 350 YAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEE 409
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
LR F EM G P + +SV A A L G H + I G + N L+D
Sbjct: 410 GLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALID 469
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G I+ A KVF+R+ KR +VSWN+M+ HG+G + F+ M G+ P+ VT
Sbjct: 470 MYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVT 529
Query: 299 FLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+C+++ACSH+GL+ EG+ +F A+ + G+ P HY VDLL RAGL FI +M
Sbjct: 530 FICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKM 589
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+EP VWGALL ACR++KNVELG +++I +L P +G +LL+N+Y++ GR +DAA
Sbjct: 590 PLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAA 649
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVAND-DAHPQRAMIHKKWREISEKIKQIGYV 476
+ R KE G +K P CSW+E VH F+ +HPQ I K E+ ++K++GY
Sbjct: 650 QVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQ 709
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
+SS+V +++E+E L HSEKLA+AF ++S P I + KN+RVCGDCH+A KF
Sbjct: 710 AESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFI 769
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S V +R+I VRD +RFHHF+DG C+CGD+W
Sbjct: 770 SLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 186/395 (47%), Gaps = 17/395 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKN--------DIAMQNTILNAYAKCGCLDEARKLFDEM 53
C K L +++H H+L + D+ + +++ Y C L AR +FD+M
Sbjct: 19 CIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEK-LVDLYIACSELKIARHVFDKM 77
Query: 54 P--VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK 111
P K++V W LI Y+ N E AI L+ +ML G+ PN+FT VLKA A +
Sbjct: 78 PHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSA-LKEAS 136
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
GR++H + + NVYV ++L+D YA+ +DDA +F + ++ V+WN++I+G +
Sbjct: 137 EGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFS 196
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ ++ P + V A+A SL GK +H ++ G
Sbjct: 197 LHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVV 256
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR- 289
VG ++D+Y K I+ A ++F+ + + ++ V+W++M+ + + F ++L
Sbjct: 257 VGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLML 316
Query: 290 --NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+ I + VT V+ C++ L G K G + T + + + G++
Sbjct: 317 KDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGII 376
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ A++F EM + A + A++ + N E G
Sbjct: 377 NGAMRFFNEMDLRD-AVSFTAIISGYVQNGNSEEG 410
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 153/291 (52%), Gaps = 6/291 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L +H + + S F D+ + NT+L+ YAKCG ++ A + F+EM ++D V++
Sbjct: 335 CANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSF 394
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY QN E + +F +M G+ P + TL+SVL A A +G H + +
Sbjct: 395 TAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPAC-AHLAGLHYGSCSHCYAI 453
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + + ++L+DMYA+ ++D A +F + + VSWN +I + G +AL
Sbjct: 454 ICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALL 513
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMY 240
F M EG +P ++ + +A + +G + +GK W +A G +VD+
Sbjct: 514 LFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLL 573
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKM 287
+++G ++ ++ L+ DV W ++L+ C + LG+ + +K+
Sbjct: 574 SRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKL 624
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 350/566 (61%), Gaps = 6/566 (1%)
Query: 5 LKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
L LK + +HA+++ G K+ + + +++ Y KC L AR++FD + +++WT
Sbjct: 238 LADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWT 297
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCL 121
A+I+ Y + + LF +ML G+ PN+ T+ S++K G AGA + G+ +HAF L
Sbjct: 298 AMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALE--LGKLLHAFTL 355
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ ++ + ++ +DMY + + A +F + +SK+ + W+A+I+ +A+ + ++A
Sbjct: 356 RNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFD 415
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G P + S+ A GSLE GKW+H+++ K G + + + VDMYA
Sbjct: 416 IFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYA 475
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
G I+ A ++F RD+ WN+M++G A HG G+A + FE+M G+ PN +TF+
Sbjct: 476 NCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIG 535
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
L ACSH+GLL EG+ F ++ + G P+ HY VDLLGRAGLLD A + I+ MP+
Sbjct: 536 ALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AV+G+ L AC++HKN++LG +AA++ L+PH SG ++L++NIYASA R D A R
Sbjct: 596 PNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIR 655
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MK+ G+ KEP S +E +H F+ D HP +++ E+ EK++ GY PD S
Sbjct: 656 RAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVS 715
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++++ + L HSEKLA+A+ LIST PG I I KN+RVC DCH+A K SK+
Sbjct: 716 CVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIY 775
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHHF++G CSC DYW
Sbjct: 776 GREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 194/380 (51%), Gaps = 8/380 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH ++ + F D+ + N ++ Y++ G L AR LFD++ KD+V+W+ +I Y ++
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY--DWNVYV 131
+ A+ L M + +KP++ + S+ A D K G+ +HA+ ++ G V +
Sbjct: 206 LDEALDLLRDMHVMRVKPSEIGMISITHVL-AELADLKLGKAMHAYVMRNGKCGKSGVPL 264
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++L+DMY + + + A +F L + +SW A+IA + + + +R F +ML EG
Sbjct: 265 CTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGM 324
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + S+ + G+LE GK +HA +++G L + +DMY K G + A
Sbjct: 325 FPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARS 384
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF+ +D++ W++M++ AQ+ F M GI PN+ T + +L C+ AG
Sbjct: 385 VFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGS 444
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L+ G+ + + K G++ + +FVD+ G +D A + E + ++W A++
Sbjct: 445 LEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMIS 503
Query: 372 ACRMHKNVELGAYAAERIFE 391
MH + E AA +FE
Sbjct: 504 GFAMHGHGE----AALELFE 519
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 3/284 (1%)
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LI+ Y +N+ P +A +++ M + + F + SVLKA G++VH F +K
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCL-IPSFLLGQEVHGFVVKN 153
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ +V+V ++L+ MY+ + A LF +E+K+ VSW+ +I + R ++AL
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYA 241
+M +P+ S+ LA L+ GK +HA+V+++G G+ + L+DMY
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K ++ A +VF+ L K ++SW +M+ VR F KML G+ PN++T L
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
++ C AG L+ G+ A ++G F+D+ G+ G
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCG 377
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 5/277 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L+ +++HA L + F + + ++ Y KCG + AR +FD KD++
Sbjct: 337 ECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMM 396
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+A+IS Y+QN+ + A +F M G++PN+ T+ S+L A A + G+ +H++
Sbjct: 397 WSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMIC-AKAGSLEMGKWIHSYI 455
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G ++ + +S +DMYA +D A LF ++ WNA+I+G A GE AL
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVD 238
F EM G P ++ A + +G L++GK + ++ G V G +VD
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYG-CMVD 574
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+ ++G +++A ++ + ++ ++ + S L C H
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + +H++I K D+ ++ + ++ YA CG +D A +LF E +D+ W
Sbjct: 439 CAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMW 498
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISG++ + E A+ LF +M LG+ PN T L A + R H
Sbjct: 499 NAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVH 558
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV----SWNALIAGHARKSEGE 177
++G+ V ++D+ R +D+A L ++ + + S+ A H GE
Sbjct: 559 EFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGE 618
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
A + F + EP Y+ + + + ++ +
Sbjct: 619 WAAKQFLSL-----EPHKSGYNVLMSNIYASAN 646
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 152 FTALES--KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
ALES N + LI + + + A + ++ M E +F SV A
Sbjct: 79 LAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIP 138
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
S G+ VH V+K+G FV N L+ MY++ GS+ A +F+++ +DVVSW++M+
Sbjct: 139 SFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIR 198
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
+ GL + M + P+++ + + + L G+ A + ++G
Sbjct: 199 SYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNG 255
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/575 (41%), Positives = 352/575 (61%), Gaps = 13/575 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
C L+ L + +H+ + S +D+ + ++++ YAKC G +D+ RK+FD M +
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 59 VTWTALISGYSQN-DQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQV 116
++WTALI+GY +N + AI LFS+M+ G ++PN FT SS KA G +D + G+QV
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG-NLSDPRVGKQV 395
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
K G N V +S++ M+ + D+M+DA F +L KN VS+N + G R
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+A + SE+ + F+++S+ + +A+ GS+ +G+ +H+ V+K G V N L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MY+K GSI+ A +VFN + R+V+SW SM+TG A+HG + F +M+ G+ PN+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VT++ +L+ACSH GL+ EG +F ++ + H ++P+ HY VDLL RAGLL A +FI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MP + VW LGACR+H N ELG AA +I ELDP++ +I L+NIYA AG+ +
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
+ R+ MKE + KE CSW+E + +H F D AHP I+ + + +IK+ GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 476 VPDSSHVL----SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
VPD+ VL D+ E+E L HSEK+A+AF LIST + + KN+RVCGDCH+
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 815
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A K+ S V REI++RD NRFHHF+DG CSC DYW
Sbjct: 816 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 226/475 (47%), Gaps = 54/475 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C + + ++VHA ++ + D + N++++ Y+K G +A +F+ M +D+
Sbjct: 72 CIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDV 131
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQ 115
V+W+A+++ Y N + +AI +F + L LGL PN + ++V++A ++ F GR
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA----CSNSDFVGVGRV 187
Query: 116 VHAFCLKYG-YDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARK 173
F +K G ++ +V VG SL+DM+ + + ++A+ +F + N V+W +I +
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+A+R F +M+ GFE F+ SSVF+A A +L GK +H+ I+SG LV V
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG--LVDDVE 305
Query: 234 NTLVDMYAK---SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH-GLGKATVRWFEKMLR 289
+LVDMYAK GS++D KVF+R+ V+SW +++TG ++ L + F +M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 290 NG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV--------------------- 327
G + PN TF AC + G+ K G+
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 328 ----------EPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACR 374
E Y TF+D R ++A K + E+ + +A + +LL
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 375 MHKNVELGAYAAERIFELDPHDSGPHI-LLANIYASAGRLNDAARARKMMKESGV 428
++ G ++ +L + P L ++Y+ G ++ A+R M+ V
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 189/403 (46%), Gaps = 20/403 (4%)
Query: 77 AIILFSQMLRLGLKP-NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSL 135
A+ M R G++P + T SS+LK S A D + G+ VHA +++ + + + +SL
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLK-SCIRARDFRLGKLVHARLIEFDIEPDSVLYNSL 103
Query: 136 LDMYARFDQMDDAWFLFTALE---SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+ +Y++ A +F + ++ VSW+A++A + A++ F E L G
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAK-SGSIEDAE 250
P + Y++V A +++ + G+ ++K+G + VG +L+DM+ K S E+A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
KVF+++ + +VV+W M+T C Q G + +R+F M+ +G ++ T V +AC+
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 311 LLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+ + + G V+ E V G +D K M + + W AL
Sbjct: 284 NLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTAL 342
Query: 370 LGACRMHKNVELGAYAAERIFEL--DPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
+ KN L A E+ H H ++ + + G L+D ++++ ++
Sbjct: 343 ITG--YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA- 399
Query: 428 VKKEPACSWVETKNAVHMFVANDDAH-PQRAMIHKKWREISEK 469
K+ A + + + MFV +D QRA + +SEK
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRA-----FESLSEK 437
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 18/285 (6%)
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPT-HFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
LI H + A+ M R+G P ++SS+ + GK VHA +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFN---RLLKRDVVSWNSMLTGCAQHGLGKATV 281
+ + + N+L+ +Y+KSG AE VF R KRDVVSW++M+ +G +
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDL 340
+ F + L G+ PN + V+ ACS++ + G+ + K G E + + +D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 341 LGRA-GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG- 398
+ + A K +M E W ++ C +++G F LD SG
Sbjct: 212 FVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC-----MQMGFPREAIRFFLDMVLSGF 265
Query: 399 --PHILLANIYASAGRLNDAARARKMMK---ESGVKKEPACSWVE 438
L++++++ L + + +++ SG+ + CS V+
Sbjct: 266 ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVD 310
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 362/599 (60%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C K +E + +H H+L + D+ + ++++ Y + G L++ARK
Sbjct: 98 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 157
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+FDE+P+KD+V+W A+ISGY++ + A+ LF +M++ ++
Sbjct: 158 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR 217
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ SV+ A A+ + GRQVH++ +G+ N+ + ++L+D+Y + +++ A
Sbjct: 218 PDESTMVSVVSACAQSASIE-LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACG 276
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L K+ +SWN LI G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336
Query: 211 LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
+E G+W+H ++ K G + +L+DMYAK G IE A++VF+ +L R + SWN+M+
Sbjct: 337 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 396
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGV 327
G A HG A F +M +N I P+ +TF+ +L+ACSH+G+LD G+ F MK+ + +
Sbjct: 397 FGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKI 456
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG +GL A + I M +EP +W +LL AC+MH NVELG A+
Sbjct: 457 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQ 516
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+ +++P + G ++LL+NIYA+AGR N+ A+ R ++ + G+KK P CS +E + VH F+
Sbjct: 517 NLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 576
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA+AF
Sbjct: 577 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 636
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC DYW
Sbjct: 637 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 198/389 (50%), Gaps = 37/389 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ + +++ W + G++ + P +A+ L+ M+ LGL PN +T +LK
Sbjct: 38 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLK- 96
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF---------- 152
S A + + G+Q+H LK GYD ++YV +SL+ MY + +++DA +F
Sbjct: 97 SCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVS 156
Query: 153 -TALES--------------------KNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
TAL + K+ VSWNA+I+G+A ++AL F EM++
Sbjct: 157 YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV 216
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + SV +A A + S+E G+ VH+ + G + N L+D+Y K G +E A
Sbjct: 217 RPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACG 276
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L +DV+SWN+++ G L K + F++MLR+G +PN VT L +L AC+H G
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336
Query: 312 LDEGQGYFALMKKH--GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
++ G+ + K GV +H + +D+ + G ++ A + + + + + W A+
Sbjct: 337 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAM 395
Query: 370 LGACRMH--KNVELGAYAAERIFELDPHD 396
+ MH N ++ R E++P D
Sbjct: 396 IFGFAMHGRANAAFDIFSRMRKNEIEPDD 424
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 35/293 (11%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLD---MYARFDQMDDAWFLFTALESKNEVSWNALIAGH 170
R +HA +K G Y S L++ + FD + A +F ++ N + WN + GH
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
A S+ AL + M+ G P +++ + + A + + +G+ +H HV+K G L
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKR------------------------------- 259
+V +L+ MY ++G +EDA KVF++ R
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
DVVSWN+M++G A+ G K + F++M++ + P++ T + V++AC+ + ++ G+
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + HG +DL + G ++ A + + + W L+G
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS-WNTLIGG 295
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/576 (40%), Positives = 347/576 (60%), Gaps = 12/576 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L + H L F++D+ + + +++ Y+KCG L AR LFDE+P +++VTW
Sbjct: 92 CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151
Query: 62 TALISGYSQNDQPENAIILFSQML---------RLGLKPNQFTLSSVLKASGAGATDDKF 112
T+LI+GY QND A+++F + L +G + + SVL A + ++
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSAC-SRVSNKAV 210
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
VH +K G D + V ++LLD YA+ ++ + +F + K+ VSWN++IA +A+
Sbjct: 211 SEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQ 270
Query: 173 KSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
A F ML+ G + + S++ A A G+L G +H VIK G
Sbjct: 271 NGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVI 330
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
+ +++DMY K G E A F+ + +++V SW +M+ G HG + + F +M+ G
Sbjct: 331 MATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAG 390
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ PN +TF+ VL ACSHAG L+EG +F A+ ++ VEP HY VDLLGRAG + A
Sbjct: 391 VKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEA 450
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
I+ M + +WG+LL ACR+HK+VEL +A +F+LDP + G ++LLANIYA A
Sbjct: 451 YNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADA 510
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
GR D R R ++K+ G+ K P S VE K VH+F+ D HPQ I+K E+S K+
Sbjct: 511 GRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKL 570
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
++ GYVP+ + VL D++E+E ++VHSEKLA+AF ++++ PGSTIH+ KN+RVCGDCH
Sbjct: 571 QEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCH 630
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ K SK+V REIIVRD RFHHF+DG CSCGDYW
Sbjct: 631 TVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 15/339 (4%)
Query: 48 KLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGA 107
K FD D+ +W +LI+ ++ ++ FS M +L +KPN+ T +K+ A
Sbjct: 40 KYFDR---TDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSA-L 95
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
D G+Q H L +G++ +++V S+L+DMY++ ++ +A LF + +N V+W +LI
Sbjct: 96 FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155
Query: 168 AGHARKSEGEKALRTFSEMLRE---------GFEPTHFSYSSVFTALASTGSLEQGKWVH 218
G+ + + +AL F E L E G + SV +A + + + VH
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
IK G V V NTL+D YAK G + + KVF+ + ++DVVSWNSM+ AQ+GL
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLST 275
Query: 279 ATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
F ML+ G N+VT +L AC+H G L G + K G +
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSI 335
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+D+ + G + A M E W A++ MH
Sbjct: 336 IDMYCKCGQAEMARNAFDGMK-EKNVRSWTAMIAGYGMH 373
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 11/232 (4%)
Query: 151 LFTALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF + +V SWN+LIA AR + ++LR FS M + +P ++ + ++
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L GK H + G + FV + L+DMY+K G + +A +F+ + +R++V+W S++T
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 270 GCAQHGLGKATVRWFEKML---------RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
G Q+ + F++ L G + + V + VL+ACS +G
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ K G++ T +D + G + + K +M E W +++
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA-EKDVVSWNSMIAV 267
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/572 (42%), Positives = 348/572 (60%), Gaps = 11/572 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA---KCGCLDEARKLFDEMPVKD 57
KCT L++LK+ + A + + +D+++ +N + + A LFD++P D
Sbjct: 29 KCTSLRELKQ---LQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPD 85
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+V + + GY++ D P A LF+Q+L GL P+ +T S+LKA + ++ GRQ+H
Sbjct: 86 IVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE-GRQLH 144
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G NVYV +L++MY ++MD A +F + V++NA+I G+AR S
Sbjct: 145 CLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPN 204
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F E+ +PT + SV ++ A G+L+ GKW+H +V K+G V L+
Sbjct: 205 EALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALI 264
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK GS++DA VF + RD +W++M+ A HG G V F++M + G P+++
Sbjct: 265 DMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEI 324
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TFL +L ACSH GL++EG YF M+ K+GV P HY VDLLGRAG L+ A +FI
Sbjct: 325 TFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVG 384
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+PI PT +W LL AC H NVELG E+IFELD G +I+L+N+ A AGR D
Sbjct: 385 LPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDV 444
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
RK+M E GV K P CS VE N VH F + D H +H+ E+ +++K +GYV
Sbjct: 445 NYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYV 504
Query: 477 PDSSHVLSYAD--QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
P++S V +AD +E+E L+ HSEKLA+ F L++TPPG+TI + KN+RVCGDCHSA K
Sbjct: 505 PNTSLVF-HADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAK 563
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + +R+II+RD RFHHF+DG CSC DYW
Sbjct: 564 LISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 337/558 (60%), Gaps = 3/558 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A+ VH IL + + D + +L Y + G + +A K+F+EMP D+V W+ +I+ + Q
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N A+ LF +M + PN+FTLSS+L G G Q+H +K G+D ++Y
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG-LGEQLHGLVVKVGFDLDIY 384
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++L+D+YA+ ++MD A LF L SKNEVSWN +I G+ EG KA F E LR
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
T ++SS A AS S++ G VH IK+ V N+L+DMYAK G I+ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VFN + DV SWN++++G + HGLG+ +R + M PN +TFL VL+ CS+AG
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 311 LLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L+D+GQ F ++++ HG+EP HY V LLGR+G LD+A+K I +P EP+ +W A+
Sbjct: 565 LIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L A N E +AE I +++P D ++L++N+YA A + + A RK MKE GVK
Sbjct: 625 LSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVK 684
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEP SW+E + VH F HP +I+ ++ K + GYVPD + VL D +
Sbjct: 685 KEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDE 744
Query: 490 EREAKLQVHSEKLALAFALISTPPG-STIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
E++ +L VHSE+LALA+ L+ P + I I KN+R+C DCHSA K S +V+R++++RD
Sbjct: 745 EKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRD 804
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFHHF G CSCGD+W
Sbjct: 805 MNRFHHFHAGVCSCGDHW 822
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 188/391 (48%), Gaps = 9/391 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ I+ + ++ + ++NAY+ CG +D AR +F+ + KD+V W ++S Y +N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E+++ L S M G PN +T + LKAS G GA D F + VH LK Y + VG
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD--FAKGVHGQILKTCYVLDPRVG 285
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
LL +Y + M DA+ +F + + V W+ +IA + +A+ F M RE F
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFV 344
Query: 193 -PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P F+ SS+ A G+ +H V+K G L +V N L+D+YAK ++ A K
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L ++ VSWN+++ G G G F + LRN ++ +VTF L AC+
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+D G L K + A + +D+ + G + A EM A+ W AL+
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS-WNALIS 523
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
H LG A + + D P+ L
Sbjct: 524 GYSTHG---LGRQALRILDIMKDRDCKPNGL 551
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 169/357 (47%), Gaps = 5/357 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C A+ +H IL D+ N +LNAY K G +A LFDEMP ++ V+
Sbjct: 58 RCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVS 117
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ L GY+ D I L+S++ R G + N +S LK + +H+
Sbjct: 118 FVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLF-VSLDKAEICPWLHSPI 172
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K GYD N +VG++L++ Y+ +D A +F + K+ V W +++ + E +L
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSL 232
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ S M GF P ++++ + A G+ + K VH ++K+ L VG L+ +Y
Sbjct: 233 KLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLY 292
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G + DA KVFN + K DVV W+ M+ Q+G V F +M + PN+ T
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLS 352
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L C+ G+ L+ K G + + +D+ + +D A+K E+
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + VH + + +A+ N++++ YAKCG + A+ +F+EM D+ +W
Sbjct: 459 CASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALISGYS + A+ + M KPN T VL D+ +
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEKAL 180
+G + + + ++ + R Q+D A L + + V W A+++ ++ E A
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFAR 638
Query: 181 RTFSEMLR 188
R+ E+L+
Sbjct: 639 RSAEEILK 646
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/543 (43%), Positives = 333/543 (61%), Gaps = 34/543 (6%)
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
++ +W ++I+ +++ A+ FS M +L LKPN+ T +K+ A D GRQ
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSA-LLDLHSGRQA 98
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H L +G++ +++V S+L+DMY++ ++ DA LF + +N VSW ++I G+ + +
Sbjct: 99 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 177 EKALRTFSEMLR--------------------EGFEPTH------------FSYSSVFTA 204
+ALR F M E E H + S+V A
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A +GS GK +H VIK G + FVG +++DMY K G +E A K F+R+ +++V SW
Sbjct: 219 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 278
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMK 323
++M+ G HG K + F +M G+ PN +TF+ VL ACSHAGLL+EG +F A+
Sbjct: 279 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 338
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ VEP HY VDLLGRAG L A I+ M + P VWGALLGACRMHKNV+LG
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGE 398
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+A ++FELDP + G ++LL+NIYA AGR D R R +MK SG+ K P S V+ K V
Sbjct: 399 ISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRV 458
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H+F+ D HPQ I++ ++S K++++GYVPD + VL +E+E L+VHSEKLA
Sbjct: 459 HVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLA 518
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF +++T PG+TIHI KN+RVCGDCH+A KF SK+V+REI+VRD+ RFHHFRDG CSCG
Sbjct: 519 VAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCG 578
Query: 564 DYW 566
DYW
Sbjct: 579 DYW 581
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 191/387 (49%), Gaps = 58/387 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L R H L F+ D+ + + +++ Y+KCG L +AR LFDE+ +++V+W
Sbjct: 86 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 145
Query: 62 TALISGYSQNDQPE-----------------NAII--------------LFSQMLRLG-L 89
T++I+GY QND N+II +F +M++ G +
Sbjct: 146 TSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 205
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
N TLS+VL A A + + G+ +H +K G + NV+VG+S++DMY + +++ A
Sbjct: 206 NYNAVTLSAVLLAC-AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 264
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
F + KN SW+A++AG+ ++AL F EM G +P + ++ SV A + G
Sbjct: 265 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324
Query: 210 SLEQG-KWV----HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVS 263
LE+G W H ++ G V G +VD+ ++G +++A + + L+ D V
Sbjct: 325 LLEEGWHWFKAMSHEFDVEPG---VEHYG-CMVDLLGRAGYLKEAFDLIKGMKLRPDFVV 380
Query: 264 WNSMLTGCAQH---GLGKATVR-WFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGY 318
W ++L C H LG+ + R FE + P + +L+ + AG ++ +
Sbjct: 381 WGALLGACRMHKNVDLGEISARKLFE------LDPKNCGYYVLLSNIYADAGRWEDVERM 434
Query: 319 FALMKKHG-VEPEEAHYVTFVDLLGRA 344
LMK G V+P + VD+ GR
Sbjct: 435 RILMKNSGLVKPPG---FSLVDIKGRV 458
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 36/280 (12%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
++ N SWN++IA AR + +ALR FS M + +P ++ + ++ L G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG---- 270
+ H + G + FV + LVDMY+K G + DA +F+ + R++VSW SM+TG
Sbjct: 96 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155
Query: 271 ---------------------------CAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCV 302
AQ+G+ ++ F +M+++G I N VT V
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L AC+H+G G+ + K G+E + +D+ + G ++ A K M E
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR-EKN 274
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
W A++ MH + + A E +E++ P+ +
Sbjct: 275 VKSWSAMVAGYGMHGHAK---EALEVFYEMNMAGVKPNYI 311
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/567 (41%), Positives = 333/567 (58%), Gaps = 38/567 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L +K + +H I+ ++ + + N + N YAKCG LD+AR LFD M K++V+W
Sbjct: 165 CSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSW 224
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISGY QN QPE LF +M GL P+Q T+S++L A
Sbjct: 225 NSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA------------------- 265
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
Y + +D+A F ++ K++V W ++ G A+ + E AL
Sbjct: 266 -----------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALL 308
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EML E P +F+ SSV ++ A SL QG+ VH + G V + LVDMY+
Sbjct: 309 LFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYS 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G DA VF R+L R+V+SWNSM+ G AQ+G + +E+ML + P+ +TF+
Sbjct: 369 KCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVG 428
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC HAGL++ GQGYF ++ K HG+ P HY ++LLGRAG +D+A+ I+ M E
Sbjct: 429 VLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFE 488
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W LL CR++ +V G AA +FELDPH++GP+I+L+NIYA+ GR D A R
Sbjct: 489 PNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVR 548
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MK + +KK A SW+E N VH FVA D H + I+++ + +K+++ G+ PD++
Sbjct: 549 SLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTN 608
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGST-IHIKKNIRVCGDCHSAFKFASKV 539
VL ++E+ + HSEKLALAF LI P G T I I KNIRVCGDCH KF SK+
Sbjct: 609 LVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKI 668
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ R II+RD NRFHHF +G CSC D W
Sbjct: 669 IRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 174/374 (46%), Gaps = 37/374 (9%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ N +L+AY+K G +++ R +FD+M V D V++ +I+G+S N A+ F +
Sbjct: 86 RRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVR 145
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M G + +T SVL A + D K G+Q+H + +V+V ++L +MYA+
Sbjct: 146 MQEEGFESTDYTHVSVLHAC-SQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCG 204
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+D A +LF + +KN VSWN++I+G+ + + E + F EM G P + S++ +
Sbjct: 205 ALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILS 264
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A Y + G I++A K F + ++D V
Sbjct: 265 A-----------------------------------YFQCGYIDEACKTFREIKEKDKVC 289
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +M+ GCAQ+G + + F +ML + P+ T V+++C+ L +GQ
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
GV+ + VD+ + G A + M + +LG + K++E A
Sbjct: 350 IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALA 409
Query: 384 YAAERIFE-LDPHD 396
E + E L P +
Sbjct: 410 LYEEMLHENLKPDN 423
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 155/306 (50%), Gaps = 10/306 (3%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+ +++L Y++ ++D +F + + VS+N +IAG + +AL F M
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EGFE T +++ SV A + +++GK +H ++ + FV N L +MYAK G+++
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +F+R++ ++VVSWNSM++G Q+G + + F +M +G+ P+QVT +L+A
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYF 267
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE---PTAA 364
G +DE F +K E ++ + T + + G + AL REM +E P
Sbjct: 268 QCGYIDEACKTFREIK----EKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNF 323
Query: 365 VWGALLGACRMHKNVELG--AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+++ +C ++ G + IF +D HD L ++Y+ G DA K
Sbjct: 324 TISSVVSSCARLASLCQGQAVHGKAVIFGVD-HDLLVSSALVDMYSKCGETADAWIVFKR 382
Query: 423 MKESGV 428
M V
Sbjct: 383 MLTRNV 388
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGSIEDAEKVFNR 255
SY+ + + + Q K + H+ Q F+ N L+ +YAKSG++ DA +F++
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDK 83
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ +RDV SWN+ML+ ++ G + F++M + V++ V+ S G +
Sbjct: 84 MSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQM----SVHDAVSYNTVIAGFSGNGCSSQA 139
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF---IREMPIEPTAAVWGAL 369
+F M++ G E + +V+ + + + R + I + + VW AL
Sbjct: 140 LEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNAL 196
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/570 (38%), Positives = 353/570 (61%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L A ++H + + ++ + N +++ Y K G L+EA+ +F M +D+VTW
Sbjct: 179 CVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTW 238
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISG Q Q A+ +F M G+ P+ TL S+ A G D + + +H + +
Sbjct: 239 NSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGG-DGRSAKSLHCYVM 297
Query: 122 KYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+D + + G++++DMYA+ ++ A +F ++ ++ VSWN LI G+ + +A+
Sbjct: 298 RRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAV 357
Query: 181 RTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M + EG + ++ SV A + G+L+QG +HA IK G + +VG L+D+
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDL 417
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G + +A +F ++ +R WN++++G HG G + F +M + GI P+ VTF
Sbjct: 418 YAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTF 477
Query: 300 LCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ +L ACSHAGL+D+G+ +F +M+ + + P HY D+LGRAG LD A FI+ MP
Sbjct: 478 VSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP 537
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
I+P +AVWGALLGACR+H NVE+G A++ +FELDP + G ++L++N+YA G+ +
Sbjct: 538 IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDE 597
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVAND--DAHPQRAMIHKKWREISEKIKQIGYV 476
R +++ ++K P S +E K +V++F + + + HPQ I + R + KI+ +GYV
Sbjct: 598 VRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYV 657
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
D S VL + E+E L HSE+LA+AF +I+TP + +HI KN+RVCGDCH+A K+
Sbjct: 658 SDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYI 717
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++ EREIIVRD+NRFHHF+DG CSCGD+W
Sbjct: 718 SQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 190/347 (54%), Gaps = 4/347 (1%)
Query: 32 TILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKP 91
++++AY + G + EA K+FDEM +D+ W A++SG +N + A+ LF +M+ G+
Sbjct: 108 SLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAG 167
Query: 92 NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFL 151
+ T+SSVL D +H + +K+G D ++V ++L+D+Y + +++A +
Sbjct: 168 DTVTVSSVLPMC-VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCV 226
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F +E ++ V+WN++I+G ++ + AL+ F M G P + S+ +A+A G
Sbjct: 227 FHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDG 286
Query: 212 EQGKWVHAHVIKSGGQLVAFV-GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
K +H +V++ G + + GN +VDMYAK +IE A+++F+ + +D VSWN+++TG
Sbjct: 287 RSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITG 346
Query: 271 CAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
Q+GL V + M ++ G+ Q TF+ VL A SH G L +G AL K G+
Sbjct: 347 YMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNV 406
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ +DL + G L A+ +MP T W A++ +H
Sbjct: 407 DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGP-WNAIISGLGVH 452
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 178/377 (47%), Gaps = 17/377 (4%)
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
LI+ +S+ P A L +L +P+ FT S+++A+ + A+ Q+HA
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS----AAQLHAC 92
Query: 120 CLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L+ G +V+ SL+ Y RF ++ +A+ +F + ++ +WNA+++G R + +
Sbjct: 93 ALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAE 152
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F M+ EG + SSV G +H + +K G FV N L+D
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G +E+A+ VF+ + RD+V+WNS+++GC Q G A ++ F+ M +G++P+ +T
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE-AHYVTFVDLLGRAGLLDRALKFIREM 357
+ + +A + G + + + G + ++ VD+ + ++ A + M
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS-----GPHILLANIYASAGR 412
P++ + + W L+ + L A ER + H+ G + + Y+ G
Sbjct: 333 PVQDSVS-WNTLITG---YMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA 388
Query: 413 LNDAARARKMMKESGVK 429
L R + + G+
Sbjct: 389 LQQGMRMHALSIKIGLN 405
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 347/566 (61%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L R + A+ + D + +++++ YA C + A+ LFD + +V W
Sbjct: 129 CSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMW 188
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ Y +N + +F ML +G+ ++ TL SV+ A G D K G+ V +
Sbjct: 189 NAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGR-IGDAKLGKWVAEYVD 247
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N + ++L+DMYA+ ++ A LF ++S++ V+W+A+I+G+ + + +AL
Sbjct: 248 EKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALA 307
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FSEM EP + SV +A A G+LE GKWVH+++ + L +G LVD YA
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYA 367
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+DA + F + ++ +W +++ G A +G G+ + F M + I P VTF+
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH+ L++EG+ +F ++ + +G++P HY VDLLGRAGL+D A +FIR MPIE
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W ALL +C +HKNVE+G A ++I L+P SG +ILL+NIYAS G+ +AA R
Sbjct: 488 PNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIR 547
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK+ G++K P CS +E V F A D HPQ I++K E+ ++IK GY+P+++
Sbjct: 548 KEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTA 607
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V D+ E+E + HSEKLA+AF L+ PG+TI + KN+RVC DCHSA K SKV
Sbjct: 608 DVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVY 667
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFHHF+DG CSC DYW
Sbjct: 668 NREIVVRDRNRFHHFKDGTCSCNDYW 693
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 349/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + K +++H ++ +D+ ++ T+LN YA CG L AR LF+ M ++ V W
Sbjct: 89 CALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW 148
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGY +N P A++L+ +M G P++ T+++++ A A D G ++H+
Sbjct: 149 TSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC-AELKDLGVGMKLHSHIR 207
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ +GS+L++MYA+ + A +F L K+ +W+ALI G+ + + +AL+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 182 TFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ P + +V +A A G LE G+WVH ++ ++ + N+L+DM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G I+ A+++F+ + +D++SWNSM+ G A HGLG+ + F M + P+++TF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFI 387
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VLTACSHAGL+ EG+ F ++ +GV + HY VDLL RAGLL A +FIR MP+
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A+WG++LGACR++ N+ELG AA + EL+P + G +ILL+NIYA N+ +
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKV 507
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R++M E G++K P CS V N H F+A D +HP+ A I R++ EK+K +GYV D+
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADT 567
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL D ++E + HSEKLAL + L+ + G I I KN+RVC DCH+ K SK+
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKI 627
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+I +RD NRFHHF+DG CSC DYW
Sbjct: 628 YQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 181/337 (53%), Gaps = 12/337 (3%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASG 104
A +F V D++TW +++ + ++ P A+ +++ML R P++FT S+LK
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC- 89
Query: 105 AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWN 164
A + K G+ +H +KY ++Y+ ++LL+MYA + A FLF + +N+V W
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
++I+G+ + +AL + +M +GF P + +++ +A A L G +H+H+ +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
++ A +G+ LV+MYAK G ++ A +VF++L +DV +W++++ G ++ ++ F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 285 EKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQ---GYFALMKK-HGVEPEEAHYVTFVD 339
++ + + PN+VT L V++AC+ G L+ G+ Y +K H V + +D
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN----SLID 325
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + G +D A + M + + W +++ +H
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYKDLIS-WNSMVNGLALH 361
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/626 (38%), Positives = 368/626 (58%), Gaps = 68/626 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------------- 41
++ + VH+ I+ + ++++ N++LN YAKCG
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 42 -----CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFT 95
+D A F++M +D+VTW ++ISG++Q A+ +FS+MLR L P++FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------------- 141
L+SVL A A G+Q+H+ + G+D + V ++L+ MY+R
Sbjct: 282 LASVLSAC-ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 142 -------------------FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
M+ A +F +L+ ++ V+W A+I G+ + +A+
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F M+ G P ++ +++ + +S SL GK +H +KSG V N L+ MYAK
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+G+I A + F+ + +RD VSW SM+ AQHG + + FE ML G+ P+ +T++
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
V +AC+HAGL+++G+ YF +MK + P +HY VDL GRAGLL A +FI +MPIE
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P WG+LL ACR+HKN++LG AAER+ L+P +SG + LAN+Y++ G+ +AA+ R
Sbjct: 581 PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK+ VKKE SW+E K+ VH+F D HP++ I+ ++I ++IK++GYVPD++
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTA 700
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++ +E L+ HSEKLA+AF LISTP +T+ I KN+RVC DCH+A KF SK+V
Sbjct: 701 SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRDT RFHHF+DGFCSC DYW
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 211/465 (45%), Gaps = 75/465 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+AY+K G +D + FD++P +D V+WT +I GY Q AI + M++ G++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P QFTL++VL AS A + G++VH+F +K G NV V +SLL+MYA+
Sbjct: 144 PTQFTLTNVL-ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 142 -FD---------------------QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
FD QMD A F + ++ V+WN++I+G ++ +A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 180 LRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L FS+MLR+ P F+ +SV +A A+ L GK +H+H++ +G + V N L+
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 239 MYAKSGSIEDAEK---------------------------------VFNRLLKRDVVSWN 265
MY++ G +E A + +F L RDVV+W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G QHG + F M+ G PN T +L+ S L G+ K
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGA 383
G + + + +AG + A + + E W +++ A H + E L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 384 YAAERIFELDPHDSGPHILLANIYAS---AGRLNDAARARKMMKE 425
+ + L P HI ++++ AG +N + MMK+
Sbjct: 503 FETMLMEGLRP----DHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 158/310 (50%), Gaps = 39/310 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM--- 58
C +L+KL + +H+HI+ + F + N +++ Y++CG ++ AR+L ++ KD+
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 59 ------------------------------VTWTALISGYSQNDQPENAIILFSQMLRLG 88
V WTA+I GY Q+ AI LF M+ G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN +TL++ + + + G+Q+H +K G ++V V ++L+ MYA+ + A
Sbjct: 409 QRPNSYTLAA-MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 149 WFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
F + ++ VSW ++I A+ E+AL F ML EG P H +Y VF+A
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
G + QG+ + ++K +++ + + +VD++ ++G +++A++ ++ ++ DVV+W
Sbjct: 528 AGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 265 NSMLTGCAQH 274
S+L+ C H
Sbjct: 587 GSLLSACRVH 596
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 37/268 (13%)
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L+ + WN ++L Y++ MD F L ++ VSW +I G+ + KA+
Sbjct: 77 LRTAFSWN-----TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R +M++EG EPT F+ ++V ++A+T +E GK VH+ ++K G + V N+L++MY
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 241 AKSGSIEDAEKVFNRLL-------------------------------KRDVVSWNSMLT 269
AK G A+ VF+R++ +RD+V+WNSM++
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 270 GCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G Q G + F KMLR+ ++P++ T VL+AC++ L G+ + + G +
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+ + R G ++ A + I +
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQ 339
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
AF NT++ Y+K G ++ + F++L +RD VSW +M+ G G +R M++
Sbjct: 80 AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
GI P Q T VL + + ++ G+ + + K G+ + + +++ + G
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
A KF+ + + + W A++ ++L E++ E D
Sbjct: 200 A-KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/587 (39%), Positives = 351/587 (59%), Gaps = 35/587 (5%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + SA +D+ + N++++ Y CG LD A K+F + KD+V+W ++I+G+ Q
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P+ A+ LF +M +K + T+ VL A A + +FGRQV ++ + + N+ + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSAC-AKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSW------------------------------ 163
++LDMY + ++DA LF A+E K+ V+W
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 164 -NALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
NALI+ + + + +AL F E+ L++ + + S +A A G+LE G+W+H+++
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
K G ++ V + L+ MY+K G +E + +VFN + KRDV W++M+ G A HG G V
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDL 340
F KM + PN VTF V ACSH GL+DE + F M+ +G+ PEE HY VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
LGR+G L++A+KFI MPI P+ +VWGALLGAC++H N+ L A R+ EL+P + G H
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LL+NIYA G+ + + RK M+ +G+KKEP CS +E +H F++ D+AHP ++
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFALISTPPGSTIHI 519
K E+ EK+K GY P+ S VL +++E +E L +HSEKLA+ + LIST I +
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRV 691
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+RVCGDCHS K S++ +REIIVRD RFHHFR+G CSC D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 216/445 (48%), Gaps = 44/445 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTI--LNAYAKCGCLDEARKLFDEMPVKDM 58
+C L++LK+ H H++ + +D + + + A + L+ ARK+FDE+P +
Sbjct: 39 RCVSLRQLKQT---HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVH 117
W LI Y+ P +I F M+ PN++T ++KA+ A + G+ +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAA-AEVSSLSLGQSLH 154
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K +V+V +SL+ Y +D A +FT ++ K+ VSWN++I G +K +
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
KAL F +M E + +H + V +A A +LE G+ V +++ ++ + + N ++
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 238 DMYAKSGSIEDAEKVF-------------------------------NRLLKRDVVSWNS 266
DMY K GSIEDA+++F N + ++D+V+WN+
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 267 MLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+++ Q+G +A + + E L+ + NQ+T + L+AC+ G L+ G+ + +KKH
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G+ + + + G L+++ + + + VW A++G MH G A
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEA 450
Query: 386 AERIFELDPHDSGPH-ILLANIYAS 409
+ +++ + P+ + N++ +
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 39/310 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+ R V ++I + ++ + N +L+ Y KCG +++A++LFD M KD VTW
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 62 TAL-------------------------------ISGYSQNDQPENAIILFSQM-LRLGL 89
T + IS Y QN +P A+I+F ++ L+ +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 90 KPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
K NQ TL S L A GA + GR +H++ K+G N +V S+L+ MY++ ++ +
Sbjct: 362 KLNQITLVSTLSACAQVGALE--LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F ++E ++ W+A+I G A G +A+ F +M +P ++++VF A + T
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWN 265
G +++ + + H ++S +V + +VD+ +SG +E A K + + W
Sbjct: 480 GLVDEAESLF-HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWG 538
Query: 266 SMLTGCAQHG 275
++L C H
Sbjct: 539 ALLGACKIHA 548
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 9/307 (2%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYA--RFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
+Q H ++ G + Y S L M A F ++ A +F + N +WN LI +A
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 172 RKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ ++ F +M+ E P +++ + A A SL G+ +H +KS
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
FV N+L+ Y G ++ A KVF + ++DVVSWNSM+ G Q G + F+KM
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ + VT + VL+AC+ L+ G+ + ++++ V +D+ + G ++ A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH-DSGPHILLANIYAS 409
+ M E W +L + ++ E AA + P D L + Y
Sbjct: 287 KRLFDAME-EKDNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 410 AGRLNDA 416
G+ N+A
Sbjct: 342 NGKPNEA 348
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +H++I + + + + +++ Y+KCG L+++R++F+ + +D+ W
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I G + + A+ +F +M +KPN T ++V A D+ H
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGE 177
YG + ++D+ R ++ A A+ S W AL+ HA + E
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
A E L + H S+++ L GKW
Sbjct: 555 MACTRLLE-LEPRNDGAHVLLSNIYAKL--------GKW 584
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 345/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ ++ + V +++ S F+ D+ + N +L + KCG + +ARKLFDEMP KDM +W
Sbjct: 127 CVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASW 186
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G+ + A LF M T +++++AS AG + GRQ+H+ L
Sbjct: 187 MTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRAS-AGLGLVQVGRQIHSCAL 245
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +V +L+DMY++ ++DA +F + K V WN++IA +A E+AL
Sbjct: 246 KRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALS 305
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ EM G + HF+ S V A SLE K HA +++ G LVD Y+
Sbjct: 306 FYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYS 365
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +EDA VFNR+ +++V+SWN+++ G HG G+ V FE+MLR G+ PN VTFL
Sbjct: 366 KWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLA 425
Query: 302 VLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS++GL + G + ++++ + H V+P HY V+LLGR GLLD A + IR P +
Sbjct: 426 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFK 485
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT +W LL ACRMH+N+ELG AAE ++ ++P +I+L N+Y S+G+L +AA
Sbjct: 486 PTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVL 545
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ +K G++ PAC+W+E K + F+ D +H Q I++K + +I + GYV ++
Sbjct: 546 QTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENK 605
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L D++E+ L+ HSEKLA+AF LI+TP + + I + RVCGDCHSA KF + V
Sbjct: 606 ALLPDVDEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVT 664
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD +RFHHFRDG CSCGDYW
Sbjct: 665 GREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 8/218 (3%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
E+ +GF+ +Y ++ +A S+ K V +++ SG + +V N ++ ++ K G
Sbjct: 107 ELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCG 166
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ DA K+F+ + ++D+ SW +M+ G G F M TF ++
Sbjct: 167 LMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIR 226
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
A + GL+ G+ + K GV + +D+ + G ++ A +MP E T
Sbjct: 227 ASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMP-EKTTV 285
Query: 365 VWGALLGACRMHKNVELGAYAAERI-FELDPHDSGPHI 401
W +++ + +H Y+ E + F + DSG I
Sbjct: 286 GWNSIIASYALH------GYSEEALSFYYEMRDSGAKI 317
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/565 (39%), Positives = 357/565 (63%), Gaps = 6/565 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L +A VH ++ F D + ++N +++ +D ARK+FD+ + + W AL
Sbjct: 85 LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRA 144
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHAFCLKYG 124
+ + + + L+ +M +G+ ++FT + +LKA A F G+++HA L++G
Sbjct: 145 LALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHG 204
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
Y +V+V ++L+DMYARF + A +F + KN VSW+A+IA +A+ + +AL F
Sbjct: 205 YGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFR 264
Query: 185 EMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
EM+ + P + SV A A+ +LEQGK +HA++++ G + V + L+ MYA+
Sbjct: 265 EMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYAR 324
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +E + +F+R+ K+DVV WNS+++ HG G+ ++ FE+M+ +G +P+ ++F+ V
Sbjct: 325 CGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISV 384
Query: 303 LTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L ACSH GL++EG+ F +++K+HG++P HY VDLLGRA LD A K I ++ IEP
Sbjct: 385 LGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEP 444
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
VWG+LLGACR+H +VEL A++R+F+L+P ++G ++LLA+IYA A ++ R +K
Sbjct: 445 GPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKK 504
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
++ ++K P SW+E + ++ F + D+ +PQ +H +S ++KQ GY P +
Sbjct: 505 LLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKL 564
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL DQ+E+E + HSEKLA+AF LI+T G TI I KN+R+C DCHS KF SK +
Sbjct: 565 VLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFAD 624
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFHHF+DG CSCGDYW
Sbjct: 625 REIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
N LI ++ ++AL +L PT + + + A SL VH ++
Sbjct: 42 NHLIQSLCKQGNLKQALY----LLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVD 97
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G F+ L++M+++ ++++A KVF++ KR + WN++ A G G +
Sbjct: 98 GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 157
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHA----GLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
+ +M G++ ++ T+ +L AC + L +G+ A + +HG T +D
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 217
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+ R G + A EMP++ + W A++ AC A R L+ HDS P
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVS-WSAMI-ACYAKNGKPYEALELFREMMLNTHDSVP 275
Query: 400 H 400
+
Sbjct: 276 N 276
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ +++HA+IL + + + + ++ YA+CG L+ + +FD M KD+V W
Sbjct: 287 CAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLW 346
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LIS Y + AI +F +M+ G P+ + SVL A ++ + +
Sbjct: 347 NSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVK 406
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
++G +V + ++D+ R +++D+A + L W +L+ E A
Sbjct: 407 EHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAE 466
Query: 181 RTFSEMLREGFEPTH 195
R + + EPT+
Sbjct: 467 RASKRLFK--LEPTN 479
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/599 (38%), Positives = 362/599 (60%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C K +E + +H H+L + D+ + ++++ Y + G L++ARK
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 172
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+FDE+P+KD+V+W A+ISGY++ + A+ LF +M++ ++
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR 232
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ SV+ A A+ + GRQVH++ +G+ N+ + ++L+D+Y + +++ A
Sbjct: 233 PDESTMVSVVSACAQSASIE-LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACG 291
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L K+ +SWN LI G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 351
Query: 211 LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
+E G+W+H ++ K G + +L+DMYAK G IE A++VF+ +L R + SWN+M+
Sbjct: 352 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 411
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGV 327
G A HG A F +M +N I P+ +TF+ +L+ACSH+G+LD G+ F MK+ + +
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKI 471
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG +GL A + I M +EP +W +LL AC+M+ NVELG A+
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQ 531
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+ +++P + G ++LL+NIYA+AGR N+ A+ R ++ + G+KK P CS +E + VH F+
Sbjct: 532 NLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA+AF
Sbjct: 592 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 651
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC DYW
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 213/429 (49%), Gaps = 40/429 (9%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWT 62
K L+ R++HA ++ + N + ++ D A +F+ + +++ W
Sbjct: 13 KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWN 72
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ G++ + P +A+ L+ M+ LGL PN +T +LK S A + + G+Q+H LK
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLK-SCAKSKAFREGQQIHGHVLK 131
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLF-----------TALES-------------- 157
GYD ++YV +SL+ MY + +++DA +F TAL +
Sbjct: 132 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 191
Query: 158 ------KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
K+ VSWNA+I+G+A ++AL F EM++ P + SV +A A + S+
Sbjct: 192 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 251
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E G+ VH+ + G + N L+D+Y K G +E A +F L +DV+SWN+++ G
Sbjct: 252 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 311
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GVEP 329
L K + F++MLR+G +PN VT L +L AC+H G ++ G+ + K GV
Sbjct: 312 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 371
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH--KNVELGAYAAE 387
+H + +D+ + G ++ A + + + + + W A++ MH N ++
Sbjct: 372 ASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430
Query: 388 RIFELDPHD 396
R E++P D
Sbjct: 431 RKNEIEPDD 439
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFNRLLK 258
+ L + +L+ + +HA +IK+G + + L++ S + A VF + +
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+++ WN+M G A + + + M+ G+ PN TF +L +C+ + EGQ
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ K G + + + + + + + G L+ A K
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARK 159
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/571 (40%), Positives = 346/571 (60%), Gaps = 9/571 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK---CGCLDEARKLFDEMPVKD 57
KCT LK+LK+ + A + + +ND+ + ++N+ + +D A +LF+ +P D
Sbjct: 35 KCTSLKELKQ---IQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPD 91
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+V + ++ GYS+++ P AI LF + L L P+ +T S+LKA + G+Q+H
Sbjct: 92 IVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQ-GKQLH 150
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G + N YV +L++MYA + +D A +F + VS+NA+I G+AR S
Sbjct: 151 CLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPN 210
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F ++ +P + SV ++ A G+L+ GKW+H +V K+G V L+
Sbjct: 211 EALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALI 270
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK GS++ A VF + RD +W++M+ A HG G+ + FE+M R + P+++
Sbjct: 271 DMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEI 330
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TFL +L ACSH GL+DEG YF M + +G+ P HY VDLLGRAGLL A KFI E
Sbjct: 331 TFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDE 390
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+PI+PT +W LL +C H N+EL +I ELD G +++L+N+ A AG+ D
Sbjct: 391 LPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDV 450
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
RK+M G K P CS +E N VH F + D H +H+ E+ +++K +GYV
Sbjct: 451 DTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYV 510
Query: 477 PDSSHVL-SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
PD+S V+ + +E+E L+ HSEKLA++F L++TPPG+TI + KN+RVCGDCHSA K
Sbjct: 511 PDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKL 570
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S +++REII+RD RFHHF+DG CSCGDYW
Sbjct: 571 ISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 344/572 (60%), Gaps = 13/572 (2%)
Query: 2 CTHLKKLKEARIVHAHI-----LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK 56
C R++H H+ L + + N++ + YAK G LD+A ++FD MPV+
Sbjct: 74 CVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALRMFDGMPVR 133
Query: 57 DMVTWTALISGYSQND-QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
++VTWT +++ + D + + A+ M R G+ PN +T SSVL A T
Sbjct: 134 NVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA----CTTPGMLTA 189
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
VHA +K G D +V+V SSL+D Y + +D +F + +++ V WN++IAG A+ +
Sbjct: 190 VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGD 249
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
G A+ F M GF + +SV A LE G+ VHAHV+K L+ + N
Sbjct: 250 GVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLI--LHNA 307
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+DMY K GS+EDA+ +F+R+ +RDV+SW++M++G AQ+G +R F+ M G+APN
Sbjct: 308 LLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPN 367
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
VT + VL ACSHAGL+++G YF MK+ G++PE H+ VDLLGRAG LD A++FI
Sbjct: 368 HVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFI 427
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
M +EP + +W LLGACRMHKN L AYAA I +L+P D G +LL+N YA +
Sbjct: 428 HGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWT 487
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
DA + K M++ G++KEP SW+E + VH+F+A D +HP I ++ + +IK +G
Sbjct: 488 DAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLG 547
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVP + VL +++E L+ HSEK+A+ F + G I I KN+R+CGDCH+ K
Sbjct: 548 YVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAK 607
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK R I++RD RFHHF+DG CSCGDYW
Sbjct: 608 LVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/483 (46%), Positives = 315/483 (65%), Gaps = 12/483 (2%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
ML G++P+ S KA G + D G+ VH+F +K GYD +V+VGSS++DMYA+
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCD-IGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCG 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++ DA +F + +N VSW+ +I G+++ E E+ALR F + L E + F++SSV
Sbjct: 60 EIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVR 119
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
++ LE GK +H +K+ +FVG++L+ +Y+K G IEDA VF+ + R++
Sbjct: 120 VCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGM 179
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+ML CAQH + F++M G+ PN +TFLCVL ACSHAGL+++GQ YF LMK
Sbjct: 180 WNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMK 239
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
++G+EP HY + VDLLGRAG L A+ I++MP+EPT +VWGALL CR+H + EL +
Sbjct: 240 EYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELAS 299
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+ A+R+FEL P + ++AGR +AARARKM+++ GVKKE SWVE N +
Sbjct: 300 FVADRVFELGP-----------VSSAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRI 348
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F A D +HP I+KK E+ E++++ GY+ D+S VL D +E+ ++ HSE+LA
Sbjct: 349 HTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLA 408
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LIS PP I + KN+RVCGDCH+A KF SK R IIVRD NRFH F DG CSC
Sbjct: 409 IAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCR 468
Query: 564 DYW 566
DYW
Sbjct: 469 DYW 471
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 161/279 (57%), Gaps = 10/279 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + VH+ + + + D+ + +++++ YAKCG + +ARK+FDEMP +++V+W
Sbjct: 20 CGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I GYSQ + E A+ LF Q L L N FT SSV++ G +T + G+Q+H CL
Sbjct: 80 SGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCG-NSTLLELGKQIHGLCL 138
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K YD + +VGSSL+ +Y++ ++DA+ +F + +N WNA++ A+ + EKA
Sbjct: 139 KTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFD 198
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW----VHAHVIKSGGQLVAFVGNTLV 237
F +M G +P ++ V A + G +E+G++ + + I+ G Q A ++V
Sbjct: 199 LFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYA----SMV 254
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
D+ ++G ++DA + ++ S W ++LTGC HG
Sbjct: 255 DLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHG 293
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/557 (42%), Positives = 343/557 (61%), Gaps = 6/557 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H L D+ + + + Y K G +A +FDEMP +++ TW A IS Q+ +
Sbjct: 130 IHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRR 189
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+AI+ F + L + +PN T + L A GRQ+HAF ++ GY +V V +
Sbjct: 190 SLDAIVAFKEFLCVHGEPNSITFCAFLNAC-VDMVRLNLGRQLHAFIVRCGYKEDVSVAN 248
Query: 134 SLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
L+D Y + + A +F + KN VSW +++A + E E+A F + +E E
Sbjct: 249 GLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VE 307
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT F SSV +A A G LE G+ VHA +K+ + FVG+ LVDMY K GSIE+AE+V
Sbjct: 308 PTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQV 367
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML--RNGIAPNQVTFLCVLTACSHAG 310
F+ L +R++V+WN+M+ G A G +R FE+M +GI P+ VT + +L+ CS G
Sbjct: 368 FSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVG 427
Query: 311 LLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
++ G F M+ +G+EP H+ VDLLGR+GL+DRA +FI+ M I+PT +VWGAL
Sbjct: 428 AVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGAL 487
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
LGACRMH ELG AAE++FELD DSG H++L+N+ ASAGR +A RK MK+ G+K
Sbjct: 488 LGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIK 547
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
K SW+ KN +H+F A D +H + + I ++ +K+ GYVPD++ L + +
Sbjct: 548 KNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDE 607
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
E+ +++ HSEK+ALAF LI+ P G I I KN+R+CGDCHSA KF S++V REIIVRD
Sbjct: 608 EKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDN 667
Query: 550 NRFHHFRDGFCSCGDYW 566
+RFH F+DG CSC DYW
Sbjct: 668 HRFHRFKDGCCSCKDYW 684
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 206/429 (48%), Gaps = 17/429 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIA-MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
TH L R +HAHI+ + + + N ++N Y+K L+ A+ + ++ +VTW
Sbjct: 19 THCSIL--GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTW 76
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LISG N + A++ F+ M R ++PN FT V KAS A G+Q+H L
Sbjct: 77 TSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKAS-AFVQIPMTGKQIHGLAL 135
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++V+VG S DMY + DA +F + +N +WNA I+ + A+
Sbjct: 136 KGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIV 195
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F E L EP ++ + A L G+ +HA +++ G + V N L+D Y
Sbjct: 196 AFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYG 255
Query: 242 KSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTF 299
K G I AE VFNR+ R +VVSW SML Q H +A + + + R + P
Sbjct: 256 KCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA--RKEVEPTDFMI 313
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+AC+ G L+ G+ AL K VE VD+ G+ G ++ A + E+P
Sbjct: 314 SSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP- 372
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFE---LDPHDSGP-HILLANIYASAGRLND 415
E W A++G ++++ A R+FE L H P ++ L +I + R+
Sbjct: 373 ERNLVTWNAMIGGYAHQGDIDM----ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428
Query: 416 AARARKMMK 424
R ++ +
Sbjct: 429 VERGIQIFE 437
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 164/297 (55%), Gaps = 19/297 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C + +L R +HA I+ +K D+++ N +++ Y KCG + A +F+ + K++V+
Sbjct: 219 CVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVS 278
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W ++++ QN + E A ++F Q R ++P F +SSVL A A + GR VHA
Sbjct: 279 WCSMLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSAC-AELGGLELGRSVHALA 336
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K + N++VGS+L+DMY + +++A +F+ L +N V+WNA+I G+A + + + AL
Sbjct: 337 VKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMAL 396
Query: 181 RTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVG 233
R F EM G P++ + S+ + + G++E+G + + I+ G + A V
Sbjct: 397 RLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACV- 455
Query: 234 NTLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG---LGK-ATVRWFE 285
VD+ +SG ++ A E + N ++ + W ++L C HG LGK A + FE
Sbjct: 456 ---VDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFE 509
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VHA + + +++I + + +++ Y KCG ++ A ++F E+P +++VTW
Sbjct: 320 CAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTW 379
Query: 62 TALISGYSQNDQPENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
A+I GY+ + A+ LF +M G++P+ TL S+L ++ + +
Sbjct: 380 NAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESM 439
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSE 175
L YG + + ++D+ R +D A+ + + +S W AL+ H +
Sbjct: 440 RLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTEL 499
Query: 176 GEKALRTFSEM 186
G+ A E+
Sbjct: 500 GKIAAEKLFEL 510
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
S+ + ST G+ +HAH+I++ L +F+ N LV+MY+K + A+ V +
Sbjct: 11 SLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL 70
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
R VV+W S+++GC + + F M R+ + PN TF CV A + + G+
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L K G+ + + D+ + G A EMP + A W A +
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMP-QRNLATWNAYI 181
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 336/558 (60%), Gaps = 3/558 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A+ VH IL + ++ D + +L Y + G + +A K+F+EMP D+V W+ +I+ + Q
Sbjct: 266 AKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N A+ +F +M + PN+FTLSS+L G G Q+H +K G+D +VY
Sbjct: 326 NGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCS-GLGEQLHGLVVKVGFDLDVY 384
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++L+D+YA+ ++MD A LF L SKN VSWN +I G+ EG KAL F E LR
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQ 444
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
T ++SS A AS S+E G VH IK+ V N+L+DMYAK G I+ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQ 504
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VFN + DV SWN++++G + HGLG+ +R F+ M + PN +TFL VL+ CS+AG
Sbjct: 505 TVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAG 564
Query: 311 LLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L+D+GQ F +++ HG+EP HY V L GR+G LD+A+ I +P EP+ +W A+
Sbjct: 565 LIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAM 624
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L A N E +AE I +++P D ++LL+N+YA A + + A RK MKE GVK
Sbjct: 625 LSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVK 684
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEP SW+E + VH F HP +I+ ++ K + GYVPD + VL D +
Sbjct: 685 KEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDE 744
Query: 490 EREAKLQVHSEKLALAFALISTPPG-STIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
E++ +L VHSE+LALA+ L+ P + I I KN+R+C DCHSA K S +V+R++++RD
Sbjct: 745 EKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRD 804
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFHHF G CSC D+W
Sbjct: 805 MNRFHHFHAGVCSCDDHW 822
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 190/381 (49%), Gaps = 10/381 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ I+ + ++ + ++NAY+ CG +D AR +F+ + KD+V W ++S Y +N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E+++ L S+M G PN +T + LKAS G GA F + VH LK Y+ + VG
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAF--HFAKSVHGQILKTCYELDPRVG 285
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
LL +Y + M DA+ +F + + V W+ +IA + KA+ F M REGF
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REGFV 344
Query: 193 -PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P F+ SS+ A G+ +H V+K G L +V N L+D+YAK ++ A K
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVK 404
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L ++VVSWN+++ G G G + F + LRN ++ +VTF L AC+
Sbjct: 405 LFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
++ G L K A + +D+ + G + A EM A+ W AL+
Sbjct: 465 MELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS-WNALIS 523
Query: 372 ACRMHKNVELGAYAAERIFEL 392
H LG A RIF++
Sbjct: 524 GYSTHG---LGRQAL-RIFDI 540
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 5/357 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C A+ +H IL D+ N +LNAY K G +A LFDEMP ++ V+
Sbjct: 58 RCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVS 117
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ L GY+ D + L+S++ R G + N +S LK + +H+
Sbjct: 118 YVTLTQGYACQD----PVGLYSRLHREGHELNPHVFTSFLKLF-VSLDKAEICWWLHSPI 172
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K GYD N +VG++L++ Y+ +D A +F + K+ V W +++ + E +L
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSL 232
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ S M +GF P ++++ + A G+ K VH ++K+ +L VG L+ +Y
Sbjct: 233 QLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLY 292
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G + DA KVFN + K DVV W+ M+ Q+G V F +M + PN+ T
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLS 352
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L C+ G+ L+ K G + + +D+ + +D A+K E+
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAEL 409
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 4/251 (1%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
D + +H LK G +++ + LL+ Y + DA LF + +N VS+ L
Sbjct: 63 NDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLT 122
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
G+A + + +S + REG E ++S S E W+H+ ++K G
Sbjct: 123 QGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYD 178
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
AFVG L++ Y+ GS++ A VF +L +D+V W +++ ++G + +++ +M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRM 238
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+G PN TF L A G + + K E + V + L + G +
Sbjct: 239 GMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDM 298
Query: 348 DRALKFIREMP 358
A K EMP
Sbjct: 299 SDAFKVFNEMP 309
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ VH + + +A+ N++++ YAKCG + A+ +F+EM D+ +W
Sbjct: 459 CASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASW 518
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALISGYS + A+ +F M KPN T VL D+ +
Sbjct: 519 NALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMIC 578
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEKAL 180
+G + + + ++ ++ R Q+D A L + + V W A+++ + E A
Sbjct: 579 DHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFAR 638
Query: 181 RTFSEMLR 188
R+ E+L+
Sbjct: 639 RSAEEILK 646
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 338/556 (60%), Gaps = 3/556 (0%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R VHAH++ + D+ + N +L YA+ +D+A LFD + ++D TW+ ++ G+++
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
F ++LR G+ P+ +TL V++ + TD + GR +H LK+G + +V
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIR-TCRDRTDLQIGRVIHDVVLKHGLLSDHFV 138
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+SL+DMYA+ ++DA LF + SK+ V+W +I +A ++L F M EG
Sbjct: 139 CASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGV 197
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + +V A A G++ + ++ + +++++G L +G ++DMYAK GS+E A +
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF+R+ +++V+SW++M+ HG GK + F ML I PN+VTF+ +L ACSHAGL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317
Query: 312 LDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++EG +F M ++H V P+ HY VDLLGRAG LD AL+ I M +E +W ALL
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GACR+H +EL AA + EL P + G ++LL+NIYA AG+ A+ R MM + +KK
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P +W+E N + F D +HPQ I++ + +K++ GYVPD+ VL +++
Sbjct: 438 IPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEV 497
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
++ L HSEKLA+AF LI+ P G I I KN+RVCGDCH+ K S ++ R IIVRD N
Sbjct: 498 KQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDAN 557
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF DG CSCGDYW
Sbjct: 558 RFHHFNDGTCSCGDYW 573
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 148/280 (52%), Gaps = 14/280 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R++H +L +D + ++++ YAKC +++A++LF+ M KD+VTW
Sbjct: 111 CRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTW 170
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I Y+ + E +++LF +M G+ P++ + +V+ A + R + + +
Sbjct: 171 TVMIGAYADCNAYE-SLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHR-ARFANDYIV 228
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ +V +G++++DMYA+ ++ A +F ++ KN +SW+A+IA + G+ A+
Sbjct: 229 RNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAID 288
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG------KWVHAHVIKSGGQLVAFVGNT 235
F ML P ++ S+ A + G +E+G W H ++ +
Sbjct: 289 LFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMW-EEHAVRPDVKHY----TC 343
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+VD+ ++G +++A ++ + +++D W+++L C H
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIH 383
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + AR + +I+ + F D+ + +++ YAKCG ++ AR++FD M K++++W
Sbjct: 211 CAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISW 270
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ Y + + ++AI LF ML + PN+ T S+L A ++ R ++
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
++ +V + ++D+ R ++D+A L A+ K+E W+AL+ H++ E
Sbjct: 331 EHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAE 390
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
KA + E+ + P H+ L S + GKW
Sbjct: 391 KAANSLLELQPQN--PGHY-------VLLSNIYAKAGKW 420
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/567 (39%), Positives = 351/567 (61%), Gaps = 5/567 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KC ++ ++K+ VHA + + +D+ + N +L AK L A LF++M +D V+
Sbjct: 12 KCRNIFQIKQ---VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVS 68
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+ +I G+ +N E F +++R G KP+ F+L V+KA GR +H+
Sbjct: 69 WSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKAC-RDTMGLIMGRLIHSTV 127
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK G + +V S+L+DMYA+ +D+A LF + K+ V+ +IAG+A + ++
Sbjct: 128 LKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESW 187
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M R+GF P + ++ A A G++ + + VH +V L +G ++DMY
Sbjct: 188 VLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMY 247
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK GSI+ + ++F+R+ +++V+SW++M+ HG G+ + F ML +GI PN++TF+
Sbjct: 248 AKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFI 307
Query: 301 CVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSHAGL+D+G F+LM +GV P+ HY VDLLGRAG LD+AL+ I M +
Sbjct: 308 SLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEV 367
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
E +W A LGACR+H+ V+L AA+ + L + G +ILL+NIYA+AGR D A+
Sbjct: 368 EKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKI 427
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R +M + +KK P +W+E N ++ F A D++H + I++ + +S+K++ GYVPD+
Sbjct: 428 RNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDT 487
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ VL D++ + L HSEKLA+AF LI+TP G+ I I KN+RVCGDCHS K S +
Sbjct: 488 NSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAI 547
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+IIVRD NRFHHF++G CSCGDYW
Sbjct: 548 TQRDIIVRDANRFHHFKEGICSCGDYW 574
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/632 (37%), Positives = 364/632 (57%), Gaps = 68/632 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD---- 57
C ++ R VH ++ + + + N++L Y KCG + AR +F+ M V+
Sbjct: 357 CAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSW 416
Query: 58 ---------------------------MVTWTALISGYSQNDQPENAIILFSQMLRLG-L 89
+V+W +I+GY+QN A+ FS+ML +
Sbjct: 417 NVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSM 476
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY------------------------ 125
+P+ FT++SVL A A K G+Q+H++ L+ G
Sbjct: 477 EPDAFTVTSVLSAC-ANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETAR 535
Query: 126 ---------DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
D NV ++LL+ Y + A +F + +++ ++W A+I G+ + +
Sbjct: 536 RIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQN 595
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++A+ F M+ G EP + ++V +A AS L+ GK +H I+S + V N +
Sbjct: 596 DEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAI 655
Query: 237 VDMYAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+ +YA+SGS+ A +VF+++ +++ ++W SM+ AQHGLG+ V FE+M+R G+ P+
Sbjct: 656 ITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPD 715
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+T++ VL+AC+HAG +D+G+ Y+ M+ +HG+ P+ +HY VDL RAGLL A +FI
Sbjct: 716 HITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFI 775
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
+ MP+ P VWG+LL ACR+ KN +L AA ++ +DPH+SG + LAN+Y++ GR N
Sbjct: 776 QRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWN 835
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
DAAR K+ K+ GVKKE SW + VH+F A+D HPQR I++K E+ E+IK+ G
Sbjct: 836 DAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAG 895
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
+VPD + VL D + +E L HSEKLA+AF LISTP +T+ I KN+RVC DCH+A K
Sbjct: 896 FVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIK 955
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SK V+REIIVRD RFHHFRDG+CSC DYW
Sbjct: 956 FISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 66/411 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N++L+ YAK G L +A +F EMP +D V+WT +I G +++ + +A+ F M+ G
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--------- 141
P+QFTL++VL +S A GR+VH F +K G V V +S+L MY +
Sbjct: 345 PSQFTLTNVL-SSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARA 403
Query: 142 -FDQMD----DAWFLFTALES-----------------KNEVSWNALIAGHARKSEGEKA 179
F++M +W + +L + ++ VSWN +IAG+ + A
Sbjct: 404 VFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMA 463
Query: 180 LRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L+ FS ML EP F+ +SV +A A+ L+ GK +H++++++G + + N L+
Sbjct: 464 LKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIS 523
Query: 239 MYAKSGSIEDAEK---------------------------------VFNRLLKRDVVSWN 265
YAKSGS+E A + +F+ + RDV++W
Sbjct: 524 TYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWT 583
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ G Q+G + F M+ G PN T VL+AC+ LD G+ +
Sbjct: 584 AMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS 643
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
E + + + R+G + A + ++ W +++ A H
Sbjct: 644 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQH 694
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 32/261 (12%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N + +SLL +YA+ ++ DA +F + ++ VSW +I G R A++TF +M+
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EGF P+ F+ ++V ++ A+ + G+ VH V+K G V N+++ MY K G E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 248 DAEKVFNR-------------------------------LLKRDVVSWNSMLTGCAQHGL 276
A VF R +++R +VSWN+++ G Q+GL
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459
Query: 277 GKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+++F +ML + + P+ T VL+AC++ +L G+ + + + G+
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 336 TFVDLLGRAGLLDRALKFIRE 356
+ ++G ++ A + + +
Sbjct: 520 ALISTYAKSGSVETARRIMDQ 540
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/571 (40%), Positives = 348/571 (60%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + VH ++GS D + ++N Y G +D A K+FDE K + W
Sbjct: 84 CIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVW 143
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHA 118
A+ + + E+ ++L+ QM +G+ N+FT + VLKA S + G+++HA
Sbjct: 144 NAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHA 203
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L++GY+ +V+V ++LLD+YARF + A +F A+ KN VSW+A+IA +A+ K
Sbjct: 204 HILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMK 263
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F M+ E + P + SV A AS +LE GK VHA+V++ G V NTL
Sbjct: 264 ALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTL 323
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MY + G I ++VF+ + KRDV+SWNS+++ HGLGK ++ FE M+ G++P+
Sbjct: 324 ITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSY 383
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+TF+ VL ACSHAGL++E + F +++ K+ + P HY VD+LGRA LD A++ I+
Sbjct: 384 ITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQ 443
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
M +P VWG+LLG+CR+H NVEL A+ +FEL+P ++G ++LL++IYA + ND
Sbjct: 444 NMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWND 503
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R RK ++ G++K P+CSW+E K ++ V+ ++ +PQ + + +IK GY
Sbjct: 504 VRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGY 563
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VP ++ V D++E+E + HS KLA+AF LI+T G I I N+R+C DCH+ KF
Sbjct: 564 VPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKF 623
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK REI++RD NRFH F+DG CSCGDYW
Sbjct: 624 VSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 6/212 (2%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT ++ + + SL G VH ++ SG ++ L++MY GS++ A KV
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL- 311
F+ ++ + WN++ A G+ + + +M GI N+ T+ VL AC + L
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 312 ---LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
L +G+ A + +HG E T +D+ R G + A MP + W A
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP-DKNIVSWSA 250
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
++ AC + + A +I L+ D+ P+
Sbjct: 251 MI-ACYAKNEMPMKALELFQIMMLEACDTVPN 281
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/544 (40%), Positives = 340/544 (62%), Gaps = 4/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DIA N+++ Y G +++ +LF EMP +++++WT++I G Q+ + E A+ LF QM+
Sbjct: 134 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 193
Query: 86 RLGL--KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
G+ KP T V+ A A A+ G Q+HA K GY ++ Y+ ++L+ YA
Sbjct: 194 GCGVEVKPTSSTYCCVITAC-ANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK 252
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
QM+D+ +F N V W AL+ G+ + E AL+ F EM+REG P S++S
Sbjct: 253 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 312
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ +L+ G+ +H +K G + FVGN+L+ MY + G++ D +F R+ K+++VS
Sbjct: 313 SCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVS 372
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WNS++ GCAQHG G + +F +M+R+ + P+++TF +L+ACSH+G+ +G+ F
Sbjct: 373 WNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFS 432
Query: 324 KH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
++ E + HY VD+LGR+G L+ A + IR MP++ + VW LL AC MH +E+
Sbjct: 433 ENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVA 492
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AA+ I +L+PH S ++LL+N+YASA R +D +R R+ MK+ G+ K+P SW+ K
Sbjct: 493 ERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGW 552
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+ F++ D +HP I++K + K+K++GYVPD L + +++E L HSE+L
Sbjct: 553 RNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERL 612
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+ F LIST GSTI + KN+RVCGDCHSA K +K+V R+IIVRD+ RFHHF DG CSC
Sbjct: 613 AIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSC 672
Query: 563 GDYW 566
GDYW
Sbjct: 673 GDYW 676
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +HAH+ + D + ++ YA C ++++ ++F ++V W
Sbjct: 213 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 272
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TAL++GY N + E+A+ +F +M+R G+ PNQ + +S L S G +GR++H +
Sbjct: 273 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN-SCCGLEALDWGREIHTAAV 331
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +V+VG+SL+ MY R ++D +F + KN VSWN++I G A+ G AL
Sbjct: 332 KLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALA 391
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMY 240
F++M+R EP +++ + +A + +G ++G+ + + ++ V +VD+
Sbjct: 392 FFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDIL 451
Query: 241 AKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQH 274
+SG +E+AE++ N +K + + W +L+ C H
Sbjct: 452 GRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 180/374 (48%), Gaps = 18/374 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+++ EAR V + +F D+ + ++ YA+ D A +LF EMPVKD+V+W ++I
Sbjct: 25 QRIDEARTVFDKV---SFP-DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMI 80
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G A LF +M P + +S +G +FG+ A L Y
Sbjct: 81 KGCFDCADLTMARKLFDEM------PERSVVSWTTMINGF----LQFGKIEVAEGLFYKM 130
Query: 126 DW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ ++ +S++ Y +++D LF + +N +SW ++I G + E+AL F
Sbjct: 131 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190
Query: 185 EMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+M+ G E PT +Y V TA A+ +L QG +HAHV K G A++ L+ YA
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYAN 250
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
+ED+ +VF+ L +VV W +++TG + + ++ F +M+R G+ PNQ +F
Sbjct: 251 CKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSA 310
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L +C LD G+ K G+E + + + + R G L+ + + + +
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKN 369
Query: 363 AAVWGALLGACRMH 376
W +++ C H
Sbjct: 370 IVSWNSVIVGCAQH 383
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 34/266 (12%)
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM------- 186
S++ + R ++D+A +F + + + +I G+AR + AL+ F EM
Sbjct: 16 SMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVS 75
Query: 187 --------------------LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
E E + S++++ G +E + + K
Sbjct: 76 WNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGL---FYKMPF 132
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+ +A N+++ Y +G +ED ++F + R+V+SW SM+ G QHG + + F +
Sbjct: 133 RDIA-AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQ 191
Query: 287 MLRNG--IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
M+ G + P T+ CV+TAC++A L +G A + K G + +
Sbjct: 192 MMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANC 251
Query: 345 GLLDRALKFIREMPIEPTAAVWGALL 370
++ +L+ + + +W AL+
Sbjct: 252 KQMEDSLR-VFHGKLHMNVVIWTALV 276
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/571 (40%), Positives = 355/571 (62%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTH L +A+ VH H+L + F D + ++N Y+ +D ARK+FD+ + + +
Sbjct: 80 CTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVY 139
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHA 118
AL S E + ++ +M +G+ ++FT + VLKA A GR++HA
Sbjct: 140 NALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHA 199
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L++GYD V++ ++L+DMYA+F + +A +F + KN VSW+A+IA +A+ + +
Sbjct: 200 HILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFE 259
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F E++ E + P + SV A A+ +LEQG+ +H ++++ G + V + L
Sbjct: 260 ALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISAL 319
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MYA+ G +E ++VF+++ KRDVVSWNS+++ HG GK + FE+M NG+ P+
Sbjct: 320 VTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSP 379
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
++F+ VL ACSHAGL+DEG+ F M HG+ P HY VDLLGRA L+ A K I
Sbjct: 380 ISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIE 439
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
M IEP VWG+LLG+CR+H NVEL A+ R+F+L+P ++G ++LLA+IYA AG +
Sbjct: 440 NMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDG 499
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R +K+++ G++K P SW+E K ++ FV+ D+ +P+ +H ++S ++K+ GY
Sbjct: 500 VKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGY 559
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VP + VL E+E + HSEKLA+AF LI++ G I I K++R+C DCHS KF
Sbjct: 560 VPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKF 619
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK +EI+VRD NRFHHFRDG CSCGDYW
Sbjct: 620 ISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
N LI ++ +AL E+L P +Y + + SL + VH H+++
Sbjct: 43 NKLIQSLCKQGNLTQAL----ELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
+G F+ L++MY+ SI++A KVF++ R + +N++ + G G+ +
Sbjct: 99 NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158
Query: 284 FEKMLRNGIAPNQVTFLCVLTAC----SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
+ +M GI ++ T+ VL AC LL++G+ A + +HG + T VD
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVD 218
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+ + G + A +MP++ + W A++ AC A R L+ D P
Sbjct: 219 MYAKFGCVSNASCVFNQMPVKNVVS-WSAMI-ACYAKNGKAFEALELFRELMLETQDLCP 276
Query: 400 H 400
+
Sbjct: 277 N 277
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/566 (39%), Positives = 348/566 (61%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ + +H + F++ + + N + AYAKCG L+ A K+F + K + +W
Sbjct: 361 CLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSW 419
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++QN P A+ L QM G +P+ FT+SS+L A A ++G+++H + L
Sbjct: 420 NALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLAC-AHLKSLQYGKEIHGYVL 478
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + +VG+SLL Y + A LF ++ KN VSWNA+I+G+++ ++L
Sbjct: 479 RNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLA 538
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + L EG + + SVF A + +L GK H +V+K+ AFVG +++DMYA
Sbjct: 539 LFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYA 598
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG I+++ KVF+ L ++V SWN+++ HG GK + +E+M + G P++ T++
Sbjct: 599 KSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIG 658
Query: 302 VLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC HAGL++EG YF M+ +EP+ HY +D+L RAG LD AL+ + EMP E
Sbjct: 659 ILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEE 718
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+W +LL +CR +E+G A+++ EL+P + ++LL+N+YA G+ + R R
Sbjct: 719 ADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVR 778
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MMKE G++K+ CSW+E V+ FV D P+ A I WR + E+I +IGY P++S
Sbjct: 779 QMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTS 838
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL ++E+ L+ HSEKLA++F L+ T G+T+ I KN+R+C DCH+A K SK V
Sbjct: 839 SVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAV 898
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREI+VRD RFHHFRDG CSC DYW
Sbjct: 899 EREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 182/379 (48%), Gaps = 14/379 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C + K ++ R +H + S ++ND + ++ YA CG ++R +FD M K+++
Sbjct: 53 CGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQ 112
Query: 61 WTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W AL+SGY++N + + +F ++ +P+ FT SV+KA G G D + G +H
Sbjct: 113 WNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACG-GILDVRLGEVIHGM 171
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G +V+VG++L+ MY + +D+A +F + N VSWN++I + +
Sbjct: 172 VIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDS 231
Query: 180 LRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
EML EG P + ++ A G ++ G +H +K G V N +V
Sbjct: 232 FDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVY 291
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQ 296
MY+K G + +A+ F + ++VVSWN+M++ + G ++M G + N+
Sbjct: 292 MYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANE 351
Query: 297 VTFLCVLTAC---SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
VT L VL AC L E GY VE A F+ + G L+ A K
Sbjct: 352 VTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSNA----FILAYAKCGALNSAEKV 407
Query: 354 IREMPIEPTAAVWGALLGA 372
+ + T + W AL+G
Sbjct: 408 FHGIG-DKTVSSWNALIGG 425
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 233/517 (45%), Gaps = 60/517 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++ ++H ++ D+ + N ++ Y KCG +DEA K+FD MP ++V+W
Sbjct: 156 CGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSW 215
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++I +S+N ++ L +ML GL P+ T+ ++L AG + G +H
Sbjct: 216 NSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVC-AGEGEVDIGMGIHGLA 274
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G V V ++++ MY++ +++A F +KN VSWN +I+ + + + +A
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334
Query: 181 RTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
EM +G E + +V A L K +H + + Q V + N +
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFIL 393
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
YAK G++ AEKVF+ + + V SWN+++ G AQ+G + + +M +G P+ T
Sbjct: 394 AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFT 453
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPE-------EAHYV---------------- 335
+L AC+H L G+ + ++G+E + +HY+
Sbjct: 454 ISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMK 513
Query: 336 --------TFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAY 384
+ + GL +L R+ I+ ++ GAC + LG
Sbjct: 514 DKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKE 573
Query: 385 AAERIFE-LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW--VETKN 441
A + + L D+ + ++YA +G + + +RK+ G+K + SW + +
Sbjct: 574 AHGYVLKALQTEDAFVGCSIIDMYAKSGCIKE---SRKVF--DGLKDKNVASWNAIIVAH 628
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
+H H + A+ E+ E++K++G +PD
Sbjct: 629 GIH-------GHGKEAI------ELYERMKKVGQMPD 652
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 161/327 (49%), Gaps = 20/327 (6%)
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
++ T LI +SQN A I +GL +L+A G D + GR++
Sbjct: 20 NLTTALILIQSHSQN----AAFISLQAKEAIGL---------LLQACG-NQKDIETGRRL 65
Query: 117 HAFCLKYGYDWNVYV-GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
H F + N YV + L+ MYA D+ +F +E+KN + WNAL++G+ R
Sbjct: 66 HKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGL 125
Query: 176 GEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
++ F +++ + F+P +F++ SV A + G+ +H VIK G L FVGN
Sbjct: 126 YGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGN 185
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIA 293
LV MY K G++++A KVF+ + + ++VSWNSM+ +++G + + +ML G+
Sbjct: 186 ALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLL 245
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA-LK 352
P+ VT + +L C+ G +D G G L K G+ E V + + G L+ A +
Sbjct: 246 PDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMS 305
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNV 379
F++ W ++ A + +V
Sbjct: 306 FVKNN--NKNVVSWNTMISAFSLEGDV 330
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/637 (37%), Positives = 367/637 (57%), Gaps = 77/637 (12%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG---------CLDEARKLFDEMPVK 56
+K K + +H ++ S ++ N ++++Y KC + EARKLFDEMP +
Sbjct: 162 EKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNR 221
Query: 57 DMVTWTALISGYSQNDQPE-----------------NAII--------------LFSQML 85
D ++WT +I+GY +N+ + NA+I +F +M+
Sbjct: 222 DELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMI 281
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY----GYDWNVYVGSSLLDMYAR 141
++ ++FT +SV+ A A + G+++HA+ LK D + V ++L+ Y +
Sbjct: 282 MSKIQLDEFTFTSVISVC-ANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWK 340
Query: 142 ----------FDQM---------------------DDAWFLFTALESKNEVSWNALIAGH 170
F++M D+A F + KN +SW +I+G
Sbjct: 341 CGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGL 400
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
A+ E+AL+ F+ M +GFEP ++++ + + GSL+ G+ +HA V++ G +
Sbjct: 401 AQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSL 460
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
GN L+ MYA+ G ++ A +F + D +SWN+M+ QHG G + FE+ML+
Sbjct: 461 SAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKE 520
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDR 349
GI P++++FL V++ACSHAGL+ EG+ YF M +GV P+E HY +DLL RAG
Sbjct: 521 GILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSE 580
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A + + MP EP A +W ALL CR+H N++LG AAER+FEL P G ++LL+N+YA
Sbjct: 581 AKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAV 640
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
AG+ ND A+ RK+M++ GVKKEP CSW+E +N VH F+ D HP+ I+ ++ +
Sbjct: 641 AGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLE 700
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
+++IGYVPD+ VL + +E +L HSEKLA+A+ + P G+T+ + KN+R+CGDC
Sbjct: 701 MRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDC 760
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+AFKF SKVV REI+VRD RFHHFRDG CSCGDYW
Sbjct: 761 HNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 197/474 (41%), Gaps = 109/474 (22%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---------------- 54
AR VHAH++ S F+ + N +++ Y+K L+ AR LFDE+P
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91
Query: 55 -----------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
++D V + A+I+ YS N AI LF M R +P+ +T +
Sbjct: 92 AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR---------------- 141
SVL A A +K +Q+H +K G + V ++L+ Y +
Sbjct: 152 SVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEA 211
Query: 142 ---FDQMDD----AWFLFTALESKNE-----------------VSWNALIAGHARKSEGE 177
FD+M + +W KN V+WNA+I+G+A +
Sbjct: 212 RKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYL 271
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GGQLVAFVG 233
+A F +M+ + F+++SV + A+ G GK +HA+ +K+ + V
Sbjct: 272 EAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVN 331
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN---------------------------- 265
N L+ Y K G ++ A+++FN++ +RD+VSWN
Sbjct: 332 NALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNIL 391
Query: 266 ---SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
M++G AQ G + +++F +M G P F + +CS G L G+ A +
Sbjct: 392 SWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQV 451
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++G E + + + R G++D A MP A W A++ A H
Sbjct: 452 VRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQH 504
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L LK R +HA ++ +++ ++ N ++ YA+CG +D A LF MP D ++W
Sbjct: 435 CSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISW 494
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD--KFGRQVHA 118
A+I+ Q+ Q AI LF +ML+ G+ P++ + +V+ A S AG + K+ +H
Sbjct: 495 NAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHN 554
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
YG + + + ++D+ R + +A + ++ + W AL+AG
Sbjct: 555 V---YGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 33/134 (24%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS- 263
L S S + VHAH+I SG Q + N L+D+Y+KS + A +F+ + + D+V+
Sbjct: 23 LQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVAR 82
Query: 264 --------------------------------WNSMLTGCAQHGLGKATVRWFEKMLRNG 291
+N+M+T + + G A + F M R+
Sbjct: 83 TTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN 142
Query: 292 IAPNQVTFLCVLTA 305
P+ TF VL A
Sbjct: 143 FRPDNYTFTSVLGA 156
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/571 (39%), Positives = 353/571 (61%), Gaps = 10/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +H++ + ++++ + N +++ YA+ G L + +K+FD M V+D+++W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL---SSVLKASGAGATDDKFGRQVHA 118
++I Y N+QP AI LF +M ++P+ TL +S+L G D + R V
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG----DIRACRSVQG 372
Query: 119 FCLKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
F L+ G+ ++ +G++++ MYA+ +D A +F L + + +SWN +I+G+A+
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 178 KALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+A+ ++ M EG ++ SV A + G+L QG +H ++K+G L FV +L
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
DMY K G +EDA +F ++ + + V WN+++ HG G+ V F++ML G+ P+
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+TF+ +L+ACSH+GL+DEGQ F +M+ +G+ P HY VD+ GRAG L+ ALKFI+
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
M ++P A++WGALL ACR+H NV+LG A+E +FE++P G H+LL+N+YASAG+
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R + G++K P S +E N V +F + HP ++++ + K+K IGY
Sbjct: 673 VDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGY 732
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VPD VL + E+E L HSE+LA+AFALI+TP +TI I KN+RVCGDCHS KF
Sbjct: 733 VPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKF 792
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ EREIIVRD+NRFHHF++G CSCGDYW
Sbjct: 793 ISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 165/310 (53%), Gaps = 12/310 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT+L+ A+ +HA ++ S ++ + ++N Y G + AR FD + +D+ W
Sbjct: 64 CTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 62 TALISGYSQNDQPENAIILFSQ-MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ISGY + I FS ML GL P+ T SVLKA D G ++H
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT-VID---GNKIHCLA 176
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK+G+ W+VYV +SL+ +Y+R+ + +A LF + ++ SWNA+I+G+ + ++AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
T S LR T S+ +A G +G +H++ IK G + FV N L+D+Y
Sbjct: 237 -TLSNGLRAMDSVT---VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ G + D +KVF+R+ RD++SWNS++ + + F++M + I P+ +T +
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 301 CVLTACSHAG 310
+ + S G
Sbjct: 353 SLASILSQLG 362
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 140/290 (48%), Gaps = 14/290 (4%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE-M 186
NV + + L+++Y + A F +++++ +WN +I+G+ R + +R FS M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
L G P + ++ SV L + ++ G +H +K G +V +L+ +Y++ ++
Sbjct: 145 LSSGLTPDYRTFPSV---LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI-APNQVTFLCVLTA 305
+A +F+ + RD+ SWN+M++G Q G K + L NG+ A + VT + +L+A
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSA 256
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ AG + G + KHG+E E +DL G L K M + +
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS- 315
Query: 366 WGALLGACRMHKNV--ELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
W +++ A +++ + + R+ + P D I LA+I + G +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLASILSQLGDI 364
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
V T +L+ K +HA ++ S + LV++Y G++ A F+ + RD
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEK-MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
V +WN M++G + G +R F ML +G+ P+ TF VL AC + +G
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIH 173
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACR 374
L K G + + + L R + A EMP+ + W A++ G C+
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQ 228
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/544 (40%), Positives = 340/544 (62%), Gaps = 4/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DIA N+++ Y G +++ +LF EMP +++++WT++I G Q+ + E A+ LF QM+
Sbjct: 118 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 177
Query: 86 RLGL--KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
G+ KP T V+ A A A+ G Q+HA K GY ++ Y+ ++L+ YA
Sbjct: 178 GCGVEVKPTSSTYCCVITAC-ANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK 236
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
QM+D+ +F N V W AL+ G+ + E AL+ F EM+REG P S++S
Sbjct: 237 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 296
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ +L+ G+ +H +K G + FVGN+L+ MY + G++ D +F R+ K+++VS
Sbjct: 297 SCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVS 356
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WNS++ GCAQHG G + +F +M+R+ + P+++TF +L+ACSH+G+ +G+ F
Sbjct: 357 WNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFS 416
Query: 324 KH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
++ E + HY VD+LGR+G L+ A + IR MP++ + VW LL AC MH +E+
Sbjct: 417 ENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVA 476
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AA+ I +L+PH S ++LL+N+YASA R +D +R R+ MK+ G+ K+P SW+ K
Sbjct: 477 ERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGW 536
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+ F++ D +HP I++K + K+K++GYVPD L + +++E L HSE+L
Sbjct: 537 RNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERL 596
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+ F LIST GSTI + KN+RVCGDCHSA K +K+V R+IIVRD+ RFHHF DG CSC
Sbjct: 597 AIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSC 656
Query: 563 GDYW 566
GDYW
Sbjct: 657 GDYW 660
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +HAH+ + D + ++ YA C ++++ ++F ++V W
Sbjct: 197 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 256
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TAL++GY N + E+A+ +F +M+R G+ PNQ + +S L S G +GR++H +
Sbjct: 257 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN-SCCGLEALDWGREIHTAAV 315
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +V+VG+SL+ MY R ++D +F + KN VSWN++I G A+ G AL
Sbjct: 316 KLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALA 375
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMY 240
F++M+R EP +++ + +A + +G ++G+ + + ++ V +VD+
Sbjct: 376 FFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDIL 435
Query: 241 AKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQH 274
+SG +E+AE++ N +K + + W +L+ C H
Sbjct: 436 GRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 180/374 (48%), Gaps = 18/374 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+++ EAR V + +F D+ + ++ YA+ D A +LF EMPVKD+V+W ++I
Sbjct: 9 QRIDEARTVFDKV---SFP-DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMI 64
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G A LF +M P + +S +G +FG+ A L Y
Sbjct: 65 KGCFDCADLTMARKLFDEM------PERSVVSWTTMINGF----LQFGKIEVAEGLFYKM 114
Query: 126 DW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ ++ +S++ Y +++D LF + +N +SW ++I G + E+AL F
Sbjct: 115 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 174
Query: 185 EMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+M+ G E PT +Y V TA A+ +L QG +HAHV K G A++ L+ YA
Sbjct: 175 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYAN 234
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
+ED+ +VF+ L +VV W +++TG + + ++ F +M+R G+ PNQ +F
Sbjct: 235 CKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSA 294
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L +C LD G+ K G+E + + + + R G L+ + + + +
Sbjct: 295 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKN 353
Query: 363 AAVWGALLGACRMH 376
W +++ C H
Sbjct: 354 IVSWNSVIVGCAQH 367
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 34/259 (13%)
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM-------------- 186
R ++D+A +F + + + +I G+AR + AL+ F EM
Sbjct: 7 RNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKG 66
Query: 187 -------------LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
E E + S++++ G +E + + K + +A
Sbjct: 67 CFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGL---FYKMPFRDIA-AW 122
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-- 291
N+++ Y +G +ED ++F + R+V+SW SM+ G QHG + + F +M+ G
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P T+ CV+TAC++A L +G A + K G + + ++ +L
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 352 KFIREMPIEPTAAVWGALL 370
+ + + +W AL+
Sbjct: 243 R-VFHGKLHMNVVIWTALV 260
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/577 (38%), Positives = 351/577 (60%), Gaps = 43/577 (7%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
T++ Y + L AR+L D + V W A+ISGY + E A F +M +G++
Sbjct: 221 TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280
Query: 91 PNQFTLSSVLKASGAGATDDKFG-----RQVHAFCLKY----GYDWNVYVGSSLLDMYAR 141
+++T +S++ S G+ ++K G RQVH + L+ + + + V ++L+ Y +
Sbjct: 281 EDEYTYTSLI--SACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTK 338
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGH------------------------------- 170
+D+M +A +F + ++ +SWNA+++G+
Sbjct: 339 YDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGL 398
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
A+ GE+ L+ F++M EG EP ++++ TA + GSL+ G+ +H+ VI+ G
Sbjct: 399 AQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGL 458
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
GN L+ MY++ G +E AE VF + D VSWN+M+ AQHG G + FE+M++
Sbjct: 459 SAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKE 518
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDR 349
I P+++TFL +LTAC+HAGL+ EG+ YF M ++G+ P E HY +DLL RAG+ +
Sbjct: 519 DILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLK 578
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A I+ MP E A +W ALL CR+H N+ELG AA+R+ EL P G +I+L+N+YA+
Sbjct: 579 AQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAA 638
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
G+ ++ AR R +M+E GVKKEP CSWVE +N VH+F+ +D HP+ ++ +++ +
Sbjct: 639 LGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNE 698
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
+K++GYVPD+ VL + + +E L HSEKLA+ + ++ P G+TI + KN+R+CGDC
Sbjct: 699 MKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDC 758
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+AFK+ SKVVEREI+VRD RFHHF++G CSCG+YW
Sbjct: 759 HNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 202/489 (41%), Gaps = 119/489 (24%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---------------- 54
AR VHAHIL S FK + + N ++N Y K + ARKLFD++P
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 55 -----------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
++D V++ A+I+ YS + A+ LF QM R G P+ FT S
Sbjct: 84 SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDM------------------- 138
SVL A A +++ + +H +K G V ++LL
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203
Query: 139 -----------------------YARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
Y R D + A L L +V+WNA+I+G+ R+
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGL 263
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALAS----TGSLEQGKWVHAHVIKS----GGQ 227
E+A TF M G + ++Y+S+ +A S G G+ VH +++++
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHH 323
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS--------------------- 266
V V N L+ Y K + +A +VF+++ RD++SWN+
Sbjct: 324 FVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEM 383
Query: 267 ----------MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
M++G AQ+G G+ ++ F +M G+ P F +TACS G LD GQ
Sbjct: 384 PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQ 443
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + + G + + + + R G+++ A MP + + W A++ A H
Sbjct: 444 QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVS-WNAMIAALAQH 502
Query: 377 ----KNVEL 381
K +EL
Sbjct: 503 GHGVKAIEL 511
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L + +H+ ++ + ++ N ++ Y++CG ++ A +F MP D V+W
Sbjct: 433 CSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSW 492
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+ +Q+ AI LF QM++ + P++ T ++L A + C
Sbjct: 493 NAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCT 552
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGE 177
+YG + L+D+ R A + ++ + W AL+AG H G
Sbjct: 553 RYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGI 612
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A E++ G + T+ S+++ AL
Sbjct: 613 QAADRLLELI-PGQDGTYIILSNMYAALG 640
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/590 (40%), Positives = 354/590 (60%), Gaps = 37/590 (6%)
Query: 11 ARIVHAHILGSAFKNDIAMQ-NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
RI A IL + I + N ++ Y + G +DEA++LFD MP ++ ++W +I+GY+
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWN 128
QN + E A+ L + R G+ P+ +L+S A S GA + GRQVH+ +K G +N
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALET--GRQVHSLAVKAGCQFN 452
Query: 129 VYVGSSLLDMYAR----------FDQM---------------------DDAWFLFTALES 157
YV ++L+ MY + F++M +DA +F + S
Sbjct: 453 SYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLS 512
Query: 158 KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV 217
++ VSW +I+ +A+ G++A+ F ML E +P + + + GS + G+ +
Sbjct: 513 RDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQI 572
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
H IK G V N L+ MY K G D+ KVF+ + +RD+ +WN+ +TGCAQHGLG
Sbjct: 573 HTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFDSMEERDIFTWNTFITGCAQHGLG 631
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVT 336
+ ++ +E M G+ PN+VTF+ +L ACSHAGL+DEG +F M + +G+ P HY
Sbjct: 632 REAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYAC 691
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
VDLLGR G + A KFI +MPIEP +W ALLGAC++HKN E+G AAE++F +P +
Sbjct: 692 MVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSN 751
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
+G +++L+NIY+S G + A RK+MK+ GV KEP CSW++ +N VH FV D H +
Sbjct: 752 AGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKI 811
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGST 516
I +++ ++ GYVPD+ VL D++++E+ L HSEKLA+A+ L+ TP G
Sbjct: 812 EEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMP 871
Query: 517 IHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+R+CGDCH+ KF S V +R+I +RD NRFHHFR+G CSCGD+W
Sbjct: 872 IQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 175/406 (43%), Gaps = 43/406 (10%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK-CGCLDEARKLFDEMPVKDMVTW 61
T L+ L ++ +L + F++D+ + +ILN Y + LD A K FD M ++ TW
Sbjct: 234 TGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTW 293
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+ S + + AI ++ + + P+Q L + L G Q+ +
Sbjct: 294 STMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARCGRITEARILFEQIPDPIV 352
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
WN +++ Y + +D+A LF + +N +SW +IAG+A+ E+AL
Sbjct: 353 ---VSWN-----AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALD 404
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ R G P+ S +S F A + G+LE G+ VH+ +K+G Q ++V N L+ MY
Sbjct: 405 LLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYG 464
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL------------------------- 276
K ++E +VFNR+ +D VSWNS + Q+ +
Sbjct: 465 KCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISA 524
Query: 277 ------GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
G V +F+ ML PN +L+ C G GQ + KHG++ E
Sbjct: 525 YAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSE 584
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + + G D + K M E W + C H
Sbjct: 585 LIVANALMSMYFKCGCAD-SHKVFDSME-ERDIFTWNTFITGCAQH 628
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 166/363 (45%), Gaps = 38/363 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT- 60
C+H+ L+ R VH+ + + + + + N +++ Y KC ++ R++F+ M VKD V+
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSW 487
Query: 61 ------------------------------WTALISGYSQNDQPENAIILFSQMLRLGLK 90
WT +IS Y+Q ++ + A+ F ML K
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEK 547
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN L+ +L G G K G+Q+H +K+G D + V ++L+ MY + D+
Sbjct: 548 PNSPILTILLSVCG-GLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHK 605
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F ++E ++ +WN I G A+ G +A++ + M G P ++ + A + G
Sbjct: 606 VFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGL 665
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEK-VFNRLLKRDVVSWNSM 267
+++G W + L + + +VD+ ++G ++ AEK +++ ++ D V W+++
Sbjct: 666 VDEG-WQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSAL 724
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
L C H + R EK+ N ++ + S G+ E +MK+ GV
Sbjct: 725 LGACKIHKNAEIGRRAAEKLFTTE-PSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGV 783
Query: 328 EPE 330
E
Sbjct: 784 SKE 786
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 53/365 (14%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L++ARI+ I G ++ +L+ YA+ G + +AR++FD MP ++ V W A++S
Sbjct: 80 LEDARILFDAISGG----NVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSC 135
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN A LF M P++ S W
Sbjct: 136 YVQNGDITMARRLFDAM------PSRDVTS-----------------------------W 160
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N S++ Y QM DAW LF + +N V+W +I+G+ R + K F M
Sbjct: 161 N-----SMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P +++SV +A+ L + + V+K+G + +G +++++Y + S
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275
Query: 248 D-AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
D A K F+ +++R+ +W++M+ + G A + + + I P+Q L L C
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC 334
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
G + E + F + +P + + + G++D A + MP T +
Sbjct: 335 ---GRITEARILFEQIP----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWA 387
Query: 367 GALLG 371
G + G
Sbjct: 388 GMIAG 392
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/597 (39%), Positives = 360/597 (60%), Gaps = 38/597 (6%)
Query: 7 KLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+LK +R+ VH + +F D+ + N+++ Y CG L A +LF + KD+V+W +
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNS 197
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+IS ++Q + PE+A+ LF +M R + PN T+ VL A A D +FGR V ++ +
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSAC-AKKLDLEFGRWVCSYIERK 256
Query: 124 GYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWFLF 152
G ++ + +++LDMY + FD+M D A +F
Sbjct: 257 GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVF 316
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFTALASTGSL 211
A+ K +WN LI+ + + + ++AL F+E+ L + +P + S +A A G++
Sbjct: 317 NAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAI 376
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+ G W+H ++ + G L + ++LVDMYAK GS+E A +VF + +RDV W++M+ G
Sbjct: 377 DLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGL 436
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPE 330
HG GKA + F +M + PN VTF VL ACSHAGL+DEG+ +F M+ +GV PE
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPE 496
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY VD+LGRAG L+ A++ I EM P+A+VWGALLGAC +H NVELG A++++
Sbjct: 497 MKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLL 556
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
+L+P + G +LL+NIYA GR + RK+M+++ +KKEP CS +E VH F+ D
Sbjct: 557 KLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGD 616
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFALI 509
+ HP + I+ K EI+ K+K +GY P+ SH+L ++ + +E L +HSEKLA+AF L+
Sbjct: 617 NTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLV 676
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ P I + KN+R+CGDCH+ K S+V +R+I++RD RFHHFRDG CSC DYW
Sbjct: 677 TLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 43/435 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDM 58
KC+ K+LKE VHA +L + D + + A A LD AR LFD++P ++
Sbjct: 34 KCSSSKQLKE---VHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNL 90
Query: 59 VTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
TW LI Y+ + P + ++F +L + PN+FT V+KA+ + + G VH
Sbjct: 91 YTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAA-SELKASRVGTAVH 149
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K + ++Y+ +SL+ Y + A LF + K+ VSWN++I+ A+ + E
Sbjct: 150 GMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPE 209
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL F +M RE P + V +A A LE G+WV +++ + G ++ + N ++
Sbjct: 210 DALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAML 269
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA------------------------- 272
DMY K GS++DA+K+F+ + +RDV SW ML G A
Sbjct: 270 DMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNV 329
Query: 273 ------QHGLGKATVRWFEKMLRNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
Q+G K + F ++ + IA P++VT + L+AC+ G +D G +K+
Sbjct: 330 LISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE 389
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G+ + VD+ + G L++AL+ + E VW A++ MH G A
Sbjct: 390 GIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR---GKAA 445
Query: 386 AERIFELDPHDSGPH 400
+ FE+ P+
Sbjct: 446 IDLFFEMQEAKVKPN 460
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 173/382 (45%), Gaps = 16/382 (4%)
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P ++ FS + L N LS++ K S + K ++VHA L+ G ++ + S
Sbjct: 7 PSISLQNFSTLNNNLLFRNHQILSTIDKCSSS-----KQLKEVHARMLRTGLFFDPFSAS 61
Query: 134 SLLDMYA--RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
L A F +D A LF + N +WN LI +A S+ ++ F ++L +
Sbjct: 62 KLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCE 121
Query: 192 E-PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+ P F++ V A + + G VH IK + ++ N+LV Y G + AE
Sbjct: 122 DLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAE 181
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
++F + +DVVSWNSM++ AQ + + F KM R + PN VT + VL+AC+
Sbjct: 182 RLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKL 241
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L+ G+ + +++ G++ + +D+ + G +D A K EMP E W +L
Sbjct: 242 DLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIML 300
Query: 371 GACRMHKNVELGAYAAER-IFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
++G Y A R +F P + +L + Y G+ +A ++ S +
Sbjct: 301 DG-----YAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKI 355
Query: 429 KKEPACSWVETKNAVHMFVAND 450
K + V T +A A D
Sbjct: 356 AKPDEVTLVSTLSACAQLGAID 377
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I + + +++++ YAKCG L++A ++F + +D+ W
Sbjct: 370 CAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVW 429
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
+A+I+G + + + AI LF +M +KPN T ++VL A S AG D+ GR H
Sbjct: 430 SAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDE--GRVFFHEM 487
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-------WNALIAG--- 169
YG + + ++D+ R A FL A+E NE+S W AL+
Sbjct: 488 EPVYGVVPEMKHYACMVDILGR------AGFLEEAMELINEMSTTPSASVWGALLGACSL 541
Query: 170 HARKSEGEKA 179
H GE A
Sbjct: 542 HMNVELGELA 551
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/571 (40%), Positives = 349/571 (61%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L VH ++ S F D + ++N Y + G +D A K+FDE + + W
Sbjct: 88 CAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVW 147
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHA 118
AL + + + L+ QM +G ++FT + VLKA S + G+++HA
Sbjct: 148 NALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHA 207
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L++GY+ N++V ++LLD+YA+F + A +F A+ +KN VSW+A+IA A+ K
Sbjct: 208 HILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMK 267
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F M+ E P + ++ A A +LEQGK +H ++++ + V N L
Sbjct: 268 ALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNAL 327
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ MY + G + ++VF+ + KRDVVSWNS+++ HG GK ++ FE M+ G++P+
Sbjct: 328 ITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSY 387
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
++F+ VL ACSHAGL++EG+ F +++ K+ + P HY VDLLGRA L A+K I
Sbjct: 388 ISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIE 447
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+M EP VWG+LLG+CR+H NVEL A+ +FEL+P ++G ++LLA+IYA A ++
Sbjct: 448 DMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSE 507
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A K+++ G++K P CSW+E K V+ FV+ D+ +PQ IH ++S ++K GY
Sbjct: 508 AKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGY 567
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VP ++ VL D++E+E + HSEKLA+AF LI+T G TI I+KN+R+C DCH+ KF
Sbjct: 568 VPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKF 627
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK REI+VRD NRFHHFRDG CSCGDYW
Sbjct: 628 ISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT ++ + + A SL G VH ++ SG F+ L++MY + GSI+ A KV
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL- 311
F+ +R + WN++ A G GK + + +M G ++ T+ VL AC + L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 312 ---LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
L +G+ A + +HG E T +D+ + G + A MP + + W A
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVS-WSA 254
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
++ AC + + A ++ + +S P+
Sbjct: 255 MI-ACFAKNEMPMKALELFQLMMFEACNSVPN 285
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/546 (40%), Positives = 346/546 (63%), Gaps = 6/546 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ M NT++ +CG ++E+++LF + +D ++WT +I+G QN A+ +F +
Sbjct: 201 ERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFRE 260
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M G +QFT SVL A G+ + G+Q+HA+ ++ + NV+VGS+L+DMY++
Sbjct: 261 MRLAGFAMDQFTFGSVLTACGSLLALGE-GKQIHAYVIRTDHKDNVFVGSALVDMYSKCR 319
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ A +F + KN +SW A++ G+ + E+A++ F EM R G EP F+ SV +
Sbjct: 320 SIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVIS 379
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAF--VGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
+ A+ SLE+G H + SG L++F V N L+ +Y K GS E++ ++F + RD
Sbjct: 380 SCANLASLEEGAQFHCRALVSG--LISFITVSNALITLYGKCGSTENSHRLFTEMNIRDE 437
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-A 320
VSW ++L G AQ G T+ FE+ML +G+ P+ VTF+ VL+ACS AGL+++G YF +
Sbjct: 438 VSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFES 497
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
++K+HG+ P H +DLLGRAG L+ A FI MP P W LL +CR+H ++E
Sbjct: 498 MIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME 557
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
+G +AA+ + L+P + ++LL+++YAS G+ + A+ R+ M++ V+KEP SW++ K
Sbjct: 558 IGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYK 617
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
VH+F A+D + P I+ + +++ K+ + GYVPD S VL ++ E+ L HSE
Sbjct: 618 GKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSE 677
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
KLA+AF LI PPG I + KN+RVCGDCH+A KF SK+ +REI+VRD RFH F+DG C
Sbjct: 678 KLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTC 737
Query: 561 SCGDYW 566
SCGD+W
Sbjct: 738 SCGDFW 743
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 194/374 (51%), Gaps = 34/374 (9%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR-LGL 89
NTIL+ Y+K G L + +++F+ MP +D V+W ISGY+ +A+ ++ ML+ +
Sbjct: 75 NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------- 141
N+ T S++L D GRQ++ LK+G+ +V+VGS L+DMY +
Sbjct: 135 NLNRITFSTMLILCSKFRCVD-LGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAK 193
Query: 142 --FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
FD+M +++ LF L+ ++ +SW +I G + +
Sbjct: 194 RYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLERE 253
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F EM GF F++ SV TA S +L +GK +HA+VI++ + FVG+ LVD
Sbjct: 254 ALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVD 313
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY+K SI+ AE VF R+ +++V+SW +ML G Q+G + V+ F +M RNG+ P+ T
Sbjct: 314 MYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFT 373
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
V+++C++ L+EG + G+ + L G+ G + + + EM
Sbjct: 374 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMN 433
Query: 359 IEPTAAVWGALLGA 372
I + W ALL
Sbjct: 434 IRDEVS-WTALLAG 446
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 154/276 (55%), Gaps = 3/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L E + +HA+++ + K+++ + + +++ Y+KC + A +F MP K++++W
Sbjct: 280 CGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY QN E A+ +F +M R G++P+ FTL SV+ + A+ ++ G Q H L
Sbjct: 340 TAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEE-GAQFHCRAL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + +++ LFT + ++EVSW AL+AG+A+ + + +
Sbjct: 399 VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIG 458
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMY 240
F ML G +P ++ V +A + G +E+G +IK G + + ++D+
Sbjct: 459 LFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLL 518
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++G +E+A N + DVV W ++L+ C HG
Sbjct: 519 GRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++ +++L +Y++ + +F + ++ VSWN I+G+A A+R + ML
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129
Query: 188 REG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
++ ++S++ + ++ G+ ++ ++K G FVG+ LVDMY K G I
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189
Query: 247 EDAEKVFNRLLKRDVV-------------------------------SWNSMLTGCAQHG 275
DA++ F+ + +R+VV SW M+TG Q+G
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
L + + F +M G A +Q TF VLTAC L EG+ A + + +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
VD+ + + A + MP + W A+L
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMP-QKNVISWTAML 343
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+S+ + + Q K +H ++K+ Q F+ N L+ Y K G++ A VF+ +
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 258 KRDVVSWNSML-------------------------------TGCAQHGLGKATVRWFEK 286
+ ++ SWN++L +G A +G VR ++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 287 MLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
ML++ + N++TF +L CS +D G+ + K G + VD+ + G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 346 LLDRALKFIREMP 358
L+ A ++ EMP
Sbjct: 188 LIYDAKRYFDEMP 200
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 348/544 (63%), Gaps = 4/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ ++ YA G ++ A K+FDE+PVKD+V+W A ISGY++ + A+ LF +M+
Sbjct: 168 DVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMM 227
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+ ++P++ T+ +VL A + + GRQVH++ +G+ N+ + ++L+D+Y++ ++
Sbjct: 228 KTNVRPDESTMVTVLSACAQSGSIE-LGRQVHSWINDHGFGXNLKIVNALIDLYSKCGEL 286
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A LF L +K+ +SWN LI G+ + ++AL F +MLR G +P + S+ +A
Sbjct: 287 ETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSAC 346
Query: 206 ASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A G+++ G+W+H ++ K G + + +L+DMYAK G IE A++VF+ +L R + S
Sbjct: 347 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS 406
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALM 322
WN+M+ G A HG A F +M +NGI P+ +TF+ +L+ACSH+G+LD G+ F ++
Sbjct: 407 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ + + P+ HY +DL G +GL A K I M +EP +W +LL AC+MH NVELG
Sbjct: 467 RDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELG 526
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A+ + +++P + G ++LL+NIYA+A R N+ A+ R ++ + G+KK P CS +E +
Sbjct: 527 ESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 586
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
VH F+ D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKL
Sbjct: 587 VHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 646
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC
Sbjct: 647 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSC 706
Query: 563 GDYW 566
DYW
Sbjct: 707 NDYW 710
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 208/429 (48%), Gaps = 40/429 (9%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWT 62
K L+ RI+HA ++ + N + +L D A +FD + ++ W
Sbjct: 13 KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWN 72
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ G++ + P +A+ L+ M+ LGL PN +T +LK S A + K G+Q+H LK
Sbjct: 73 TMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLK-SCAKSXAFKEGQQLHGQVLK 131
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAW-------------------------------FL 151
+G+D ++Y+ +SL+ MY + +++DA +
Sbjct: 132 FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKM 191
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + K+ VSWNA I+G+A ++AL F +M++ P + +V +A A +GS+
Sbjct: 192 FDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSI 251
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E G+ VH+ + G + N L+D+Y+K G +E A +F L +DV+SWN+++ G
Sbjct: 252 ELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGY 311
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GVEP 329
L K + F+ MLR+G PN VT L +L+AC+H G +D G+ + K GV
Sbjct: 312 THMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTN 371
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH--KNVELGAYAAE 387
+ + +D+ + G ++ A + M + + + W A++ MH N ++
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430
Query: 388 RIFELDPHD 396
R ++P D
Sbjct: 431 RKNGIEPDD 439
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 15/283 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ R VH+ I F ++ + N +++ Y+KCG L+ A LF + KD+++W
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
LI GY+ + + A++LF MLR G KPN T+ S+L A GA D GR +H +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAID--IGRWIHVYI 362
Query: 121 LKY--GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G + +SL+DMYA+ ++ A +F ++ +++ SWNA+I G A
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANA 422
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN---- 234
A FS M + G EP ++ + +A + +G L+ G+ H+ +S + +
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMTRDYKLMPKLEHY 478
Query: 235 -TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++D+ SG ++AEK+ N + ++ D V W S+L C HG
Sbjct: 479 GCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHG 521
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFNRLLK 258
+ L +L+ + +HA +IK+G + + L++ S + A VF+ + +
Sbjct: 6 LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
++ WN+M G A + ++ + M+ G+ PN TF +L +C+ + EGQ
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ K G + + + + + + + G L+ A K
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQK 159
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 352/541 (65%), Gaps = 10/541 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ ++ YA G +D+A+K+FDE+P+KD+V+W A+ISGY++ + + A+ LF++M+
Sbjct: 143 DVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMM 202
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
++ +KP++ T+++VL ++ + + + GRQ+H++ +G+ N+ + ++L+D+Y++ +M
Sbjct: 203 KMDVKPDESTMATVL-STCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEM 261
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A LF L+ K+ +SWN LI G+A + ++AL F EML+ G P + S+ A
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPAC 321
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-----LVDMYAKSGSIEDAEKVFNRLLKRD 260
A G+++ G+W+H ++ K +L + NT L+DMYAK G+IE A +VF+ +L +
Sbjct: 322 AHLGAIDIGRWIHVYIDK---KLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+ S N+M+ G A HG A +M ++GI P+ +TF+ +L+ACSHAGL D G+ F
Sbjct: 379 LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFK 438
Query: 321 LMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
M + +EP+ HY +DLLGR+GL A + I M +EP +WG+LL AC++HKN+
Sbjct: 439 SMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNL 498
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
ELG A+++ +++P + G ++LL+NIYA++ R +D AR R ++ + G+KK P CS +E
Sbjct: 499 ELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEI 558
Query: 440 KNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
+ VH F+ D HPQ I+K EI + + G+V D+S VL +++ +E L HS
Sbjct: 559 DSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHS 618
Query: 500 EKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
EKLA+AF LIST PG+ + I KN+RVC +CH A K SK+ +REII RD +RFHHF+DG
Sbjct: 619 EKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGM 678
Query: 560 C 560
C
Sbjct: 679 C 679
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 177/342 (51%), Gaps = 36/342 (10%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F + + ++W +I G++ + P +A+ L+ M+ LGL PN +T + K
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFK- 86
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FD--------- 143
S A + + G+Q+HA LKYG +++V +SL+ MYA+ FD
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146
Query: 144 ------------QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
MD A +F + K+ VSWNA+I+G+A ++AL F+EM++
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAE 250
+P + ++V + +G++E G+ +H+ + G G + V N L+D+Y+K G +E A
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV-NALIDLYSKCGEMERAH 265
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F L +DV+SWN+++ G A K + F++ML+ G PN VT L +L AC+H G
Sbjct: 266 GLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLG 325
Query: 311 LLDEGQGYFALMKK--HGVEPEEAHYVTFVDLLGRAGLLDRA 350
+D G+ + K G+ + + +D+ + G ++ A
Sbjct: 326 AIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 150/280 (53%), Gaps = 11/280 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTH ++ R +H+ I F +++ + N +++ Y+KCG ++ A LF+ + KD+++W
Sbjct: 220 CTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISW 279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
LI GY+ + + A+++F +ML+LG PN T+ S+L A GA D GR +H +
Sbjct: 280 NTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID--IGRWIHVYI 337
Query: 121 LK--YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G N + +SL+DMYA+ ++ A +F + +K+ S NA+I G A +
Sbjct: 338 DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADA 397
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI---KSGGQLVAFVGNT 235
A S M ++G EP ++ + +A + G + G+ + + + +L +
Sbjct: 398 AFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHY--GC 455
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++D+ +SG ++AE++ N + ++ D V W S+L C H
Sbjct: 456 MIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH 495
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 121 LKYGYDWNVYVGSSLLD---MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G Y S LLD + F + A +F +++ N++SWN +I GHA S+
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL + M+ G P +++ +F + A + + ++GK +HA ++K G + V +L+
Sbjct: 61 SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120
Query: 238 DMYAKSGSIEDAEKV-------------------------------FNRLLKRDVVSWNS 266
MYA++G +EDA KV F+ + +DVVSWN+
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M++G A+ G K + F +M++ + P++ T VL+ C+H+G ++ G+ + + HG
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+DL + G ++RA + + + W L+G
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVIS-WNTLIGG 285
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/600 (39%), Positives = 350/600 (58%), Gaps = 42/600 (7%)
Query: 8 LKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM----PVKDMVTWT 62
+K +I AH + F+ D+ + ++ AYA+ GC+DEA++LF EM ++++W
Sbjct: 160 IKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWN 219
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+I+G++ + A+++F M G +P+ T+SSVL A G D G +H + +K
Sbjct: 220 GMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVG-DLEDLVMGILIHGYVIK 278
Query: 123 YGYDWNVYVGSSLLDMYAR----------FDQMD---------------------DAWFL 151
G + V S+L+DMY + FDQMD + L
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 152 FTALESK----NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
F L+ + N VSW ++IA ++ +AL F EM G +P + + A +
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
+L GK H ++ G +VG+ L+DMYAK G I+ + F+ + +++V WN++
Sbjct: 399 IAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAV 458
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHG 326
+ G A HG K + F+ M R+G P+ ++F CVL+ACS +GL +EG YF ++ K+G
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+E HY V LL RAG L++A IR MP+ P A VWGALL +CR+H NV LG AA
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
E++FEL+P + G +ILL+NIYAS G N+ R R MMK G++K P CSW+E KN VHM
Sbjct: 579 EKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHML 638
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
+A D +HPQ I +K ++S ++K++GY P+ + VL ++Q++E L HSEKLA+ F
Sbjct: 639 LAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVF 698
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
L++TPPG + + KN+R+CGDCH KF S REI VRDTNRFHHF++G CSCGDYW
Sbjct: 699 GLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 201/456 (44%), Gaps = 78/456 (17%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + R HAHIL + ND + +L+ YA C +A + D +P ++ +++ LI
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+S+ Q +A+ FSQML GL P+ L S +KA AG + K RQVH G+D
Sbjct: 89 FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKAC-AGLSALKPARQVHGIASVSGFDS 147
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM- 186
+ +V SSL+ MY + +Q+ DA +F + + VSW+AL+A +AR+ ++A R FSEM
Sbjct: 148 DSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMG 207
Query: 187 -----------------------------------LREGFEPTHFSYSSVFTALASTGSL 211
LR GFEP + SSV A+ L
Sbjct: 208 DSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR-GFEPDGTTISSVLPAVGDLEDL 266
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK----------------------------- 242
G +H +VIK G V + L+DMY K
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326
Query: 243 --SGSIEDAEKVFNRL----LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+G +E + ++F +L ++ +VVSW SM+ C+Q+G + F +M G+ PN
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNS 386
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
VT C+L AC + L G+ + G+ + +D+ + G + +
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
+P + W A++ MH A A IF+L
Sbjct: 447 IPTK-NLVCWNAVIAGYAMHGK----AKEAMEIFDL 477
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 152/308 (49%), Gaps = 40/308 (12%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD------- 57
L+ L ++H +++ +D + + +++ Y KC C E ++FD+M D
Sbjct: 263 LEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAF 322
Query: 58 ----------------------------MVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
+V+WT++I+ SQN + A+ LF +M G+
Sbjct: 323 IFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGV 382
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
KPN T+ +L A G A G+ H F L+ G +VYVGS+L+DMYA+ ++ +
Sbjct: 383 KPNSVTIPCLLPACGNIAA-LMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASR 441
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
F + +KN V WNA+IAG+A + ++A+ F M R G +P S++ V +A + +G
Sbjct: 442 ICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSG 501
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNS 266
E+G + + + + S + A V + +V + +++G +E A + R+ + D W +
Sbjct: 502 LTEEGSY-YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGA 560
Query: 267 MLTGCAQH 274
+L+ C H
Sbjct: 561 LLSSCRVH 568
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 4/251 (1%)
Query: 80 LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMY 139
L +Q L L L Q T+ + L ++ A + RQ HA LK G + ++ + LL Y
Sbjct: 3 LSAQALAL-LDSVQHTIFNCLNSTTASLSQT---RQAHAHILKTGLFNDTHLATKLLSHY 58
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
A DA + + N S++ LI ++ + AL TFS+ML G P +
Sbjct: 59 ANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLP 118
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S A A +L+ + VH SG +FV ++LV MY K I DA +VF+R+ +
Sbjct: 119 SAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP 178
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
DVVSW++++ A+ G R F +M +G+ PN +++ ++ +H+GL E F
Sbjct: 179 DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
Query: 320 ALMKKHGVEPE 330
M G EP+
Sbjct: 239 LDMHLRGFEPD 249
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L + H L D+ + + +++ YAKCG + +R FD +P K++V W
Sbjct: 396 CGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCW 455
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY+ + + + A+ +F M R G KP+ + + VL A ++ ++
Sbjct: 456 NAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSS 515
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
KYG + V + ++ + +R +++ A+ + + + + W AL++ H S GE
Sbjct: 516 KYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGE 575
Query: 178 KALRTFSEM 186
A E+
Sbjct: 576 VAAEKLFEL 584
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 348/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + K +++H ++ +D+ ++ T+LN YA CG L AR LF+ M ++ V W
Sbjct: 89 CALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW 148
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGY +N P A++L+ +M G P++ T+++++ A A D G ++H+
Sbjct: 149 TSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC-AELKDLGVGMKLHSHIR 207
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ +GS+L++MYA+ + A +F L K+ +W+ALI G+ + + +AL+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 182 TFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E+ P + +V +A A G LE G+WVH ++ ++ + N+L+DM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G I+ A+++F+ + +D++SWNSM+ G A HGLG+ + F M + P+++TF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFI 387
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VLTACSHAGL+ EG+ F ++ +GV + HY VDLL RAGLL A +FIR MP+
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A+WG++LGACR++ N+ELG AA + +L+P + G +ILL+NIYA N+ +
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKV 507
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R++M E G++K P CS V N H F+A D +HP+ A I R++ EK+K GYV D+
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADT 567
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL D ++E + HSEKLAL + L+ + G I I KN+RVC DCH+ K SK+
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKI 627
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+I +RD NRFHHF+DG CSC DYW
Sbjct: 628 YQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 177/326 (54%), Gaps = 12/326 (3%)
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
D++TW +++ + ++ P A+ +++ML R P++FT S+LK A + K G+
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC-ALLLEFKVGKV 100
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+H +KY ++Y+ ++LL+MYA + A FLF + +N+V W ++I+G+ +
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+AL + +M +GF P + +++ +A A L G +H+H+ + ++ A +G+
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAP 294
LV+MYAK G ++ A +VF++L +DV +W++++ G ++ ++ F ++ + + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280
Query: 295 NQVTFLCVLTACSHAGLLDEGQ---GYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRA 350
N+VT L V++AC+ G L+ G+ Y +K H V + +D+ + G +D A
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN----SLIDMFSKCGDIDAA 336
Query: 351 LKFIREMPIEPTAAVWGALLGACRMH 376
+ M + + W +++ +H
Sbjct: 337 KRIFDSMSYKDLIS-WNSMVNGFALH 361
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALA 206
A+ +F + ++WN+++ + +AL++++EML R P F++ S+ A
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ GK +H V+K ++ TL++MYA G ++ A +F R+ R+ V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M++G ++ + ++KM +G +P++VT +++AC+ L G + +++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ V++ + G L A + ++ + A W AL+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYA-WSALI 253
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/591 (39%), Positives = 353/591 (59%), Gaps = 33/591 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+K R +H HI+ F +++ +QN +++ Y+ G + AR +FD D+VTW +ISG
Sbjct: 135 VKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISG 194
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+++ Q + ++ LF +M R+ + P+ TL SVL A + D G++VH + +
Sbjct: 195 YNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSAC-SKLKDLNVGKRVHRYVKDLKIEP 253
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNE--------------------------- 160
+ ++L+DMYA MD A +F ++S++
Sbjct: 254 VRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMP 313
Query: 161 ----VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
VSW A+I G+ + + ++ L F EM +P F+ S+ TA A G+LE G+W
Sbjct: 314 ERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEW 373
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ A++ K+ ++ +FVGN L+DMY G++E A ++FN + RD +SW +++ G A +G
Sbjct: 374 IKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGY 433
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYV 335
G+ + F +ML+ I P++VT + VL AC+H+G++D+G+ +FA M +HG+EP AHY
Sbjct: 434 GEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYG 493
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VDLLGRAG L A + I+ MP++P + VWG+LLGACR+H++ E+ AA++I EL+P
Sbjct: 494 CMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPE 553
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ ++LL NIYA+ R RK+M + G+KK P CS +E +VH FVA D HPQ
Sbjct: 554 NGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQ 613
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I+ K E+S +K GY PD+S V ++E+E+ + HSEKLA+AF LIS+ PG
Sbjct: 614 SKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGV 673
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI I KN+R+C DCH K SKV RE+IVRD RFHHFR G CSC DYW
Sbjct: 674 TIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 197/403 (48%), Gaps = 41/403 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK--CGCLDEARKLFDEMPVKDMV 59
C + +LK+ +H+ + + ++ + I+ K G ++ AR +FD MP +
Sbjct: 29 CKSMAQLKQ---IHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHF 85
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W +I GYS+ P +A+ ++ +ML G+ P+++T +LK T K GR++H
Sbjct: 86 VWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLK-RFTRDTAVKCGRELHDH 144
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G+ NV+V ++L+ +Y+ ++ A +F + V+WN +I+G+ R + +++
Sbjct: 145 IVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDES 204
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F EM R P+ + SV +A + L GK VH +V + V + N L+DM
Sbjct: 205 MKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDM 264
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG---CAQHGLG------------------- 277
YA G ++ A +F+ + RDV+SW +++TG Q GL
Sbjct: 265 YAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMI 324
Query: 278 ---------KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
K + F +M I P++ T + +LTAC+H G L+ G+ A + K+ ++
Sbjct: 325 DGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIK 384
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMP----IEPTAAVWG 367
+ +D+ G +++A++ MP I TA ++G
Sbjct: 385 IDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 151/308 (49%), Gaps = 38/308 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK L + VH ++ + ++N +++ YA CG +D A +FD M +D+++W
Sbjct: 230 CSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISW 289
Query: 62 TALISGYSQNDQ-----------PENAII--------------------LFSQMLRLGLK 90
TA+++G++ Q PE + LF +M +K
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Query: 91 PNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P++FT+ S+L A GA + G + A+ K + +VG++L+DMY ++ A
Sbjct: 350 PDEFTMVSILTACAHLGALE--LGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAI 407
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F A+ ++++SW A+I G A GE+AL FS+ML+ P + V A +G
Sbjct: 408 RIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSG 467
Query: 210 SLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVF-NRLLKRDVVSWNS 266
+++GK A + G VA G +VD+ ++G +++A +V N +K + + W S
Sbjct: 468 MVDKGKKFFARMTTQHGIEPNVAHYG-CMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGS 526
Query: 267 MLTGCAQH 274
+L C H
Sbjct: 527 LLGACRVH 534
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ + A+I + K D + N +++ Y CG +++A ++F+ MP +D ++W
Sbjct: 362 CAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISW 421
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + N E A+ +FSQML+ + P++ T VL A DK +
Sbjct: 422 TAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTT 481
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
++G + NV ++D+ R + +A + + K N + W +L+ G R E+
Sbjct: 482 QHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLL-GACRVHRDEEMA 540
Query: 181 RTFSEMLREGFEP 193
++ + E EP
Sbjct: 541 EMAAQQILE-LEP 552
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 354/569 (62%), Gaps = 4/569 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK--DM 58
KC K L E + VH+ ++ + +D + N ++ Y KCG + EAR +FD++ K D+
Sbjct: 33 KCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADV 92
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
++W +I Y+QN + A+ LF M G+ NQ TL + + A + ++++ GR VHA
Sbjct: 93 ISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE-GRIVHA 151
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ + + VG+SL++M+ + +D A +F +L KN V+WN ++A +++ + +K
Sbjct: 152 IAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKK 211
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A++ F M EG +P ++ ++ A A+ + +G+ VH + SG + +G ++
Sbjct: 212 AIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMH 271
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
Y K G +++A +F+ L K++ V+W+++L AQ+G + + +M++ G+ N +T
Sbjct: 272 FYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGIT 331
Query: 299 FLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
FL +L ACSHAG +G YF ++++ GV P HY+ +DLLGR+G L + I M
Sbjct: 332 FLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSM 391
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P EP ++ W ALLGACRMH +V+ GA AE I+ELDP DSGP+ILL+N+Y+S GR+++A
Sbjct: 392 PYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEAR 451
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R RK M+ G+ K+P S +E K+ VH F+A HPQ IH + + ++K+ GYV
Sbjct: 452 RTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVA 511
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D VL +++E+E L HSE+LA+AF LISTPPG+ +HI KN+RVC DCH+A K S
Sbjct: 512 DVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAIS 571
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KVV R+I+VRD RFHHF +G CSCGDYW
Sbjct: 572 KVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y + A + +L +GK VH+ ++K G + N L++MY K G I +A VF+++
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85
Query: 257 LKR--DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
++ DV+SWN ++ Q+GLGK + F+ M G+ NQVT + + AC+ +E
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145
Query: 315 GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
G+ A+ +E + + V++ G+ +D A +P
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP 189
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 350/568 (61%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + ++H + + + D+ + N ++N YAK G L A +F++M V+D+V+W
Sbjct: 250 CVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSW 309
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+L++ + QN +P A+ ++++M +G+ P+ TL S L + A + R +H F
Sbjct: 310 NSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVS-LASVAAELGNFLSSRSIHGFVT 368
Query: 122 KYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + ++ +G++++DMYA+ +D A +F L K+ +SWN+LI G+++ +A+
Sbjct: 369 RRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAI 428
Query: 181 RTFSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+S M G P ++ S+ TA + G+L+QG H +IK+ FV LVDM
Sbjct: 429 DVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDM 488
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G + DA +F + + VSWN++++ HG G V+ F++M G+ P+ +TF
Sbjct: 489 YGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITF 548
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ +L+ACSH+GL+DEGQ F LM++ +G+ P HY VDL GRAG L++A F++ MP
Sbjct: 549 VSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMP 608
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ P +VWGALLGACR+H+NVEL ++ + +++ + G ++LL+NIYA G
Sbjct: 609 VRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDE 668
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R + ++ G+KK P S +E + +F + HP+ I+ + R ++ K+K IGYVPD
Sbjct: 669 VRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPD 728
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ VL + E+E L HSE+LA+AF +ISTPP +T+ I KN+RVCGDCH+A KF SK
Sbjct: 729 YNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISK 788
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ EREIIVRD+NRFHHF+DG CSCGDYW
Sbjct: 789 ITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 201/426 (47%), Gaps = 21/426 (4%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+ K+ A+ +HA ++ S I + ++N YA G + AR FD++ KD+ TW +
Sbjct: 52 YCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNS 111
Query: 64 LISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+IS Y++ A+ F++ L L+ + +T V++A G DD GR+VH LK
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA--CGNLDD--GRKVHCLVLK 167
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G++ +VY+ +S + Y+RF + A LF + ++ +WNA+I+G + +AL
Sbjct: 168 LGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEV 227
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F EM + + SS+ + G +H + IK G + FV N L++MYAK
Sbjct: 228 FDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAK 287
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G + AE +FN++ RD+VSWNS+L Q+ + + KM G+ P+ +
Sbjct: 288 FGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPD------L 341
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV-------TFVDLLGRAGLLDRALKFIR 355
LT S A + E + + HG ++ +D+ + G +D A K
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFE 401
Query: 356 EMPIEPTAAVWGALLGACRMH--KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
+P++ + W +L+ + N + Y++ R + + G + + ++ G L
Sbjct: 402 GLPVKDVIS-WNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGAL 460
Query: 414 NDAARA 419
+A
Sbjct: 461 KQGMKA 466
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 349/594 (58%), Gaps = 30/594 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +ARI+ +I F+ D+ + +++ YAKCGC++ AR++FD M K++++W
Sbjct: 269 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 328
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ Y + Q A+ LF ML G+ P++ TL+S+L A + RQVHA
Sbjct: 329 SAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC-INCRNLTQVRQVHAQAS 387
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+G N+ V + L+ Y+ + +DDA+ LF + ++ VSW+ ++ G A+ +
Sbjct: 388 VHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFG 447
Query: 182 TFSEMLR----------------------------EGFEPTHFSYSSVFTALASTGSLEQ 213
TF E++R EG P + +V A A G++ +
Sbjct: 448 TFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHK 507
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
+ + ++ + QL +G ++DM+AK G +E A ++F+R+ +++V+SW++M+
Sbjct: 508 ARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY 567
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEA 332
HG G+ + F MLR+GI PN++T + +L ACSHAGL++EG +F+LM + + V +
Sbjct: 568 HGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVK 627
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
HY VDLLGRAG LD ALK I M +E +WGA LGACR HK+V L AA + EL
Sbjct: 628 HYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL 687
Query: 393 DPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDA 452
P + G +ILL+NIYA+AGR D A+ R +M + +KK P +W+E N H F D
Sbjct: 688 QPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTT 747
Query: 453 HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTP 512
HP+ I++ + + K++ +GYVPD++ VL D++ + L HSEKLA+AF LI+TP
Sbjct: 748 HPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATP 807
Query: 513 PGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ I I KN+RVCGDCH+ K S + R IIVRD NRFHHF++G CSCGDYW
Sbjct: 808 EHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 178/353 (50%), Gaps = 29/353 (8%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ + L + R VHA +I + N ++ Y+ LD+A LFD M V+D V+W+
Sbjct: 89 VNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWS 148
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++ G+++ N F +++R G +P+ +TL V++A R + +
Sbjct: 149 VMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC----------RDLKNLQM- 197
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+L+DMY + +++DA FLF ++ ++ V+W +I G+A + ++L
Sbjct: 198 -----------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 246
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F +M EG P + +V A A G++ + + + ++ + QL +G ++DMYAK
Sbjct: 247 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 306
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +E A ++F+R+ +++V+SW++M+ HG G+ + F ML +G+ P+++T +
Sbjct: 307 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 366
Query: 303 LTACSHAGLLDEGQGYFALMKKHG------VEPEEAHYVTFVDLLGRA-GLLD 348
L AC + L + + A HG V + H+ ++ L A GL D
Sbjct: 367 LYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFD 419
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 169/322 (52%), Gaps = 8/322 (2%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+Q +++ Y KC +++AR LFD+M +D+VTWT +I GY++ + +++LF +M G
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+ P++ + +V+ A K R + + + + +V +G++++DMYA+ ++ A
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHK-ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 313
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F +E KN +SW+A+IA + +G KAL F ML G P + +S+ A +
Sbjct: 314 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
+L Q + VHA G V N LV Y+ +++DA +F+ + RD VSW+ M+
Sbjct: 374 RNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 433
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G A+ G F +++R G P+ T L C +A +E F M++ GV
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFCGNA---NESLVLFDKMREEGVV 486
Query: 329 PEEAHYVTFVDLLGRAGLLDRA 350
P++ VT V + G + +A
Sbjct: 487 PDKVAMVTVVFACAKLGAMHKA 508
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
+AL + +L Q + VHA G V N L+ Y+ +++DA +F+ + RD
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
VSW+ M+ G A+ G F +++R G P+ T V+ AC L Q
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD---LKNLQMALVD 201
Query: 322 MKKHGVEPEEAHY----------VTFVDLLG---RAGLLDRALKF---IREMPIEPTAAV 365
M E E+A + VT+ ++G G + +L +RE + P
Sbjct: 202 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 261
Query: 366 WGALLGAC----RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
++ AC MHK + Y + F+LD I ++YA G + A
Sbjct: 262 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI---DMYAKCGCVESAREIFD 318
Query: 422 MMKESGV 428
M+E V
Sbjct: 319 RMEEKNV 325
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/544 (40%), Positives = 343/544 (63%), Gaps = 6/544 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+A N +++ Y + G ++E +LF+EMPV+D+++WT++I G N + E A+ +F +ML
Sbjct: 135 DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKML 194
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R G++P T + VL A A A + G QVH +K G ++ ++ SL+ YA ++
Sbjct: 195 RSGVEPTWSTFACVLSAC-ANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKI 253
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A +F +KN V W AL+ + ++ + ALR F +M + G P ++S A
Sbjct: 254 EHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKAC 313
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+L++GK +H IK G + FVGN+LV MY + G++ A VF + ++D+VSWN
Sbjct: 314 CGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWN 373
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
S++ G AQHG G + +F +M+R G+ PN++TF +L+ACS +G+L +G+ +F + ++
Sbjct: 374 SIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRY 433
Query: 326 G---VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ P+ HY VD+LGR G LD A + +R MP++ + +W ALL ACR+H N+E+
Sbjct: 434 KSNVLRPQ--HYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVA 491
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AA+ I +L+P+ S ++LL+NIYASAGR D +R R MK+ G+ K+P SWV +
Sbjct: 492 ERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGK 551
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
H F++ D +HP I++K + +K+K+ GYVPD L + +++E L HSE+L
Sbjct: 552 KHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERL 611
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF L+ST GSTI + KN+RVCGDCHS K SK+V R+I+VRD+ RFHHF++G CSC
Sbjct: 612 AIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSC 671
Query: 563 GDYW 566
DYW
Sbjct: 672 SDYW 675
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 23/356 (6%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
LD+AR +FD++P ++ +T +I+GY++ND+ +A+ LF +M + + L
Sbjct: 28 LDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDC 87
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS--------LLDMYAR----FDQMDDAWF 150
G F + + N Y+ LDM+ + ++ M +F
Sbjct: 88 GNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYF 147
Query: 151 ----------LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
LF + ++ +SW ++I G + E+AL F +MLR G EPT +++
Sbjct: 148 ENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFAC 207
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
V +A A+ G VH HV+K G F+ +L+ YA IE A K+FN L ++
Sbjct: 208 VLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKN 267
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
VV W ++LT + + +R F M + G PNQ TF L AC LD+G+
Sbjct: 268 VVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHT 327
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ K G+E + + V + G ++ A+ R + E W +++ H
Sbjct: 328 MAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQH 382
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L + + +H + + D+ + N+++ Y +CG ++ A +F + KD+V+W
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSW 372
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G +Q+ A+I F+QM+R G+ PN+ T + +L A K GR +
Sbjct: 373 NSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLK-GRCFFEYIS 431
Query: 122 KYGYDWNVYVG---SSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGE 177
+Y NV + ++D+ R ++D+A L + K N + W AL++ S E
Sbjct: 432 RYKS--NVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLE 489
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK---SGGQLVAFVGN 234
A R +L EP + SS + L++ + G+W ++ G LV G+
Sbjct: 490 VAERAAKHIL--DLEP---NCSSAYVLLSNIYA-SAGRWADVSRMRVKMKQGGLVKQPGS 543
Query: 235 TLVDMYAKSGSIEDAEK 251
+ V + K A++
Sbjct: 544 SWVVLRGKKHEFLSADR 560
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVT 298
Y ++ + DA K+F+R+ RDVVSWNSM+ GC G LG AT R F++M N ++
Sbjct: 53 YTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMAT-RLFDEMPE----KNVIS 107
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ ++ G ++ Q F M V A + + G ++ ++ EMP
Sbjct: 108 WTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFE----NGRVEEGVRLFEEMP 163
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ + W +++G ++ E + +++
Sbjct: 164 VRDVIS-WTSMIGGLDLNGKSEEALFVFKKML 194
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 353/575 (61%), Gaps = 40/575 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + R +HAH++ + +I ++ +++ Y++CG L+ A+++F+ M ++ +W
Sbjct: 288 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 347
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY QN + + A+ LF QM G+KP+ F+LSS+L +S +D + GR++H F +
Sbjct: 348 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSML-SSCVSLSDSQKGRELHNFIV 406
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKA 179
+ + + L+DMYA+ MD AW ++ T + +N WN+++AG+A K +++
Sbjct: 407 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKES 466
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F EML E + ++ L + LVDM
Sbjct: 467 FNHFLEMLESDIEYDVLTMVTIVNLLV-------------------------LETALVDM 501
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G+I A VF+ + +++VSWN+M++G ++HG K + +E+M + G+ PN+VTF
Sbjct: 502 YSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTF 561
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L +L+ACSH GL++EG F M++ + +E + HY VDLLGRAG L+ A +F+ +MP
Sbjct: 562 LAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMP 621
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
IEP + WGALLGACR+HK++++G AA+R+FELDP + GP+++++NIYA+AGR +
Sbjct: 622 IEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVED 681
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+MMK GVKK+P SW+E + + +F A HP+ I+ R ++ + K +GY+PD
Sbjct: 682 IRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPD 741
Query: 479 SSHVLSYADQQEREAK-------LQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
+S +L Q ++ K L HSE+LAL+ LIS P STI + KN+R+CGDCH+
Sbjct: 742 TSFIL----QNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHT 797
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A KF SK+ R II RDTNRFHHF +G CSCGDYW
Sbjct: 798 ATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 208/377 (55%), Gaps = 7/377 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE---ARKLFDEMPVKDM 58
C + + +H ++ + + D + IL YA+ GCLD+ ARKLF+EMP +++
Sbjct: 81 CIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNL 140
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W +I Y++ D A +F +ML++G+ P+ FT +S L+ GA + D G+QVH+
Sbjct: 141 TAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG-GKQVHS 199
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G+ + +VG++L+DMYA+ D + +F + +N+V+WN++I+ A+
Sbjct: 200 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 259
Query: 179 ALRTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F M +G +P F+++++ T A+ + QG+ +HAH+I++ V L
Sbjct: 260 ALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETEL 319
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MY++ G + A+++FNR+ +R+ SWNSM+ G Q+G + +R F++M NGI P+
Sbjct: 320 VHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDC 379
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK-FIR 355
+ +L++C +G+ + ++ +E E V VD+ + G +D A K + +
Sbjct: 380 FSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQ 439
Query: 356 EMPIEPTAAVWGALLGA 372
+ + A+W ++L
Sbjct: 440 TIKKDRNTALWNSILAG 456
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 163/331 (49%), Gaps = 20/331 (6%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF---LFTALESKNEVSWNALIAG 169
G+ +H + GY+ + Y+ + +L +YAR +DD + LF + +N +WN +I
Sbjct: 90 GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+AR + +A F ML+ G P +F+++S + S + GK VH+ +I G +
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 209
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML- 288
FVGN L+DMYAK E KVF+ + +R+ V+WNS+++ AQ G + F +M
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 269
Query: 289 -RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+GI P+Q TF +LT C++ ++G+ A + + + V + G L
Sbjct: 270 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 329
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF-ELDPHDSGPHIL-LAN 405
+ A + M E A W +++ + + + A R+F ++ + P L++
Sbjct: 330 NYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQ----EALRLFKQMQLNGIKPDCFSLSS 384
Query: 406 IYASAGRLNDAARARKM--------MKESGV 428
+ +S L+D+ + R++ M+E G+
Sbjct: 385 MLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 415
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKV 252
YSS+ + S ++GK +H +I +G A++ ++ +YA+SG ++D A K+
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F + +R++ +WN+M+ A+ F++ML+ G+ P+ TF L C
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR 191
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
D G+ + + G + + +D+ + + LK EM E W +++ A
Sbjct: 192 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG-ERNQVTWNSIISA 250
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/599 (37%), Positives = 358/599 (59%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C K KE + +H H+L + D+ + ++++ Y + G L++ARK
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSY 203
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
LFDE+PVKD+V+W A+ISGY++ + A+ LF +M++ ++
Sbjct: 204 TALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIR 263
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ +V+ A + + GRQVH++ +G+ N+ + +SL+D+Y++ +++ A
Sbjct: 264 PDESTMVTVVSACAQSGSIE-LGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACG 322
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L K+ +SWN LI G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 323 LFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382
Query: 211 LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
++ G+W+H ++ K + + +L+DMYAK G IE A +VFN +L + + SWN+M+
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGV 327
G A HG A F +M + GI P+ +TF+ +L+ACS +G+LD G+ F M + + +
Sbjct: 443 FGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKI 502
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG +GL A + I M +EP +W +LL AC++ NVELG A+
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQ 562
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+ +++P + G ++LL+NIYA+AGR N+ A+ R ++ + G+KK P CS +E + VH F+
Sbjct: 563 NLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA+AF
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 682
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC DYW
Sbjct: 683 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 210/429 (48%), Gaps = 40/429 (9%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWT 62
K L+ R++HA ++ + N + +L D A +F+ + +++ W
Sbjct: 44 KTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWN 103
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ G++ + P +A+ L+ M+ LGL PN +T +LK S A + K G+Q+H LK
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLK-SCAKSKAFKEGQQIHGHVLK 162
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDD-------------------------------AWFL 151
GYD +++V +SL+ +Y + +++D A L
Sbjct: 163 LGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKL 222
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + K+ VSWNA+I+G+A ++AL F EM++ P + +V +A A +GS+
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSI 282
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E G+ VH+ + G + N+L+D+Y+K G +E A +F LL +DV+SWN+++ G
Sbjct: 283 ELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGY 342
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
L K + F++MLR+G PN VT L +L AC+H G +D G+ + K
Sbjct: 343 THMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATN 402
Query: 332 AHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAE 387
A + + +D+ + G ++ A + + + + + W A++ MH + ++
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAAFDIFSRM 461
Query: 388 RIFELDPHD 396
R ++P D
Sbjct: 462 RKIGIEPDD 470
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 104/234 (44%), Gaps = 9/234 (3%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFNRLLK 258
+ L + +L+ + +HA +IK+G + + L+++ S + A VF + +
Sbjct: 37 LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+++ WN+M G A + ++ + M+ G+ PN TF +L +C+ + EGQ
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
+ K G + + + + + + + G L+ A K P + + AL+
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVS-YTALIKGYASRGY 215
Query: 379 VELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+E +A+++F+ P D + + YA G +A K M ++ ++ +
Sbjct: 216 IE----SAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/545 (42%), Positives = 342/545 (62%), Gaps = 4/545 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ +I N ++ AY G L+ A+ LFDEMP +++ TW A+++G ++ + E A++LFS+
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 84 MLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
M L P++++L SVL+ GA G+QVHA+ +K G++ N+ VG SL MY +
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGAL--LAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA 249
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
M D + + + V+WN L++G A+K E L + M GF P ++ SV
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVI 309
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
++ + L QGK +HA +K+G V ++LV MY++ G ++D+ K F +RDVV
Sbjct: 310 SSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVV 369
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
W+SM+ HG G+ ++ F +M + + N++TFL +L ACSH GL D+G G F +M
Sbjct: 370 LWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMM 429
Query: 323 -KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
KK+G++ HY VDLLGR+G L+ A IR MP++ A +W LL AC++HKN E+
Sbjct: 430 VKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEI 489
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
A+ + +DP DS ++LLANIY+SA R + + R+ MK+ VKKEP SWVE KN
Sbjct: 490 ARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKN 549
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
VH F D+ HP+ I++ E++ +IK+ GYVPD+S VL D +E+E L+ HSEK
Sbjct: 550 QVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEK 609
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+AFAL++TP G I + KN+RVC DCH A K+ S++ + EIIVRD++RFHHF++G CS
Sbjct: 610 LAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCS 669
Query: 562 CGDYW 566
CGDYW
Sbjct: 670 CGDYW 674
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 149/290 (51%), Gaps = 3/290 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + VHA+++ F+ ++ + ++ + Y K G + + ++ + MP +V W
Sbjct: 211 CAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAW 270
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+SG +Q E + + M G +P++ T SV+ + A + G+Q+HA +
Sbjct: 271 NTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQ-GKQIHAEAV 329
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G V V SSL+ MY+R + D+ F + ++ V W+++IA + +GE+A++
Sbjct: 330 KAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIK 389
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F+EM +E ++ S+ A + G ++G + ++K G T LVD+
Sbjct: 390 LFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLL 449
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
+SG +E+AE + + +K D + W ++L+ C H + R +++LR
Sbjct: 450 GRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLR 499
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 45/245 (18%)
Query: 170 HARKSEGEKALRTFSEM--LREGFE---------PTHFSYSSVFTALASTGSLEQGKWVH 218
+ R S+G + T +RE FE P FS ++ A S+ GK +H
Sbjct: 35 NGRFSDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFS--NLLQACIPLKSVSLGKQLH 92
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS--------------- 263
+ + SG F+ N L+++Y+K G ++ A +F+R+ +R+++S
Sbjct: 93 SLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLE 152
Query: 264 ----------------WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
WN+M+TG + + + + F +M P++ + VL C+
Sbjct: 153 SAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCA 212
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
H G L GQ A + K G E + + +AG + + I MP + + W
Sbjct: 213 HLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMP-DCSLVAWN 271
Query: 368 ALLGA 372
L+
Sbjct: 272 TLMSG 276
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/569 (41%), Positives = 343/569 (60%), Gaps = 5/569 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L + +H+ ++ S D+ + ++++ YAKCG + EARK+FD M ++++W
Sbjct: 272 CAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSW 331
Query: 62 TALISGYSQND--QPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
TAL++GY + A+ +FS ML + G+ PN FT S VLKA A D FG QVH
Sbjct: 332 TALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC-ASLPDFDFGEQVHG 390
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G VG+ L+ +YA+ +M+ A F L KN VS + + +
Sbjct: 391 QTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNS 450
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
E+ G + F+Y+S+ + A G++ +G+ +HA V+K G + V N L+
Sbjct: 451 EQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALIS 510
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY+K G+ E A +VFN + +V++W S++ G A+HG + F ML G+ PN VT
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVT 570
Query: 299 FLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
++ VL+ACSH GL+DE +F M+ HG+ P HY VDLLGR+GLL A++FI M
Sbjct: 571 YIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSM 630
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P + A VW LG+CR+H+N +LG +AA+ I E +PHD +ILL+N+YA+ GR D A
Sbjct: 631 PFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVA 690
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
RK MK+ + KE SW+E +N VH F D HP+ I++K E++ KIK +GYVP
Sbjct: 691 AIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVP 750
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
++ VL + +++E L HSEKLA+AFALISTP I + KN+RVCGDCH+A K+ S
Sbjct: 751 NTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYIS 810
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REI+VRD NRFHH +DG CSC DYW
Sbjct: 811 MVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 188/363 (51%), Gaps = 12/363 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDM 58
+C K +++H + S D + N+++ Y+K A +F M +D+
Sbjct: 61 QCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDV 120
Query: 59 VTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
V+++++IS ++ N A+ +F Q+L + G+ PN++ ++V++A G K G +
Sbjct: 121 VSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF-KTGLCLF 179
Query: 118 AFCLKYGY-DWNVYVGSSLLDMYAR---FDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
F LK GY D +V VG L+DM+ + ++ A +F + KN V+W +I A+
Sbjct: 180 GFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQY 239
Query: 174 SEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
++A+ F EML G+ P F+ + + + A L GK +H+ VI+SG L V
Sbjct: 240 GYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCV 299
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG--KATVRWFEKM-LR 289
G +LVDMYAK G +++A KVF+ + + +V+SW +++ G + G G + +R F M L+
Sbjct: 300 GCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQ 359
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+APN TF VL AC+ D G+ K G+ + V + ++G ++
Sbjct: 360 GGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMES 419
Query: 350 ALK 352
A K
Sbjct: 420 ARK 422
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/566 (40%), Positives = 346/566 (61%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L R V A+ + D + +++++ YA CG + AR +FD +V W
Sbjct: 130 CSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMW 189
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+++ Y +N + +F ML +G+ ++ TL SV+ A G D K G+ V
Sbjct: 190 NAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGR-IGDAKLGKWVAGHVD 248
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N + ++L+DMYA+ ++ A LF ++S++ V+W+A+I+G+ + + +AL
Sbjct: 249 EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALG 308
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FSEM EP + SV +A A G+LE GKWVH++V + L +G LVD YA
Sbjct: 309 LFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYA 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+DA + F + ++ +W +++ G A +G G+ + F M GI P VTF+
Sbjct: 369 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIG 428
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH+ L++EG+ +F ++ + +G++P HY VDLLGRAGL+D A +FIR MPIE
Sbjct: 429 VLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIE 488
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W ALL +C +H+NV +G A ++I L+P SG ++LL+NIYASAG+ DAA R
Sbjct: 489 PNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVR 548
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K MK+ G++K P CS +E V F A D HP+ I++K E+ +IK GYVP+++
Sbjct: 549 KEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTA 608
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V +++E+E + HSEKLA+AF L+ PG+TI + KN+RVC DCHSA K SKV
Sbjct: 609 DVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVY 668
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD N FHHF+DG CSC DYW
Sbjct: 669 DREIVVRDRNIFHHFKDGTCSCNDYW 694
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 351/568 (61%), Gaps = 5/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L + R +HA I + D+++QN +L YA+C CLD+A K+F +P +D+V+W
Sbjct: 231 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSW 290
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ +++ D + AI +S+M G++PN +T +SVL A A D + GR VH L
Sbjct: 291 SAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLAC-ASVGDLRAGRAVHDQIL 349
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY + G++L+D+Y + +D+A LF +E+++E W LI G++++ L
Sbjct: 350 GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLE 409
Query: 182 TFSEMLREGFEP-THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV-GNTLVDM 239
+ EM P T YS V +A AS G+ + H+ I++ G + FV +LV+M
Sbjct: 410 LYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD-IEADGMISDFVLATSLVNM 468
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y++ G++E A +VF+++ RD ++W +++ G A+HG + +++M G P+++TF
Sbjct: 469 YSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTF 528
Query: 300 LCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL ACSHAGL ++G Q + ++ + + P AHY +DLL RAG L A + I MP
Sbjct: 529 MVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMP 588
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+EP W +LLGA R+HK+V+ +AA +I +LDP D ++LL+N++A G L A
Sbjct: 589 VEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMAS 648
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R M GVKK SW+E + +H F D++HP+ I + + +S KIK+ GYVP+
Sbjct: 649 VRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPE 708
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
S VL ++E+E L++HSEKLA+AF LI+T PG+T+ I +R+C DCHSA KF S
Sbjct: 709 SEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISA 768
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ REIIVRD++RFH FRDG CSCGDYW
Sbjct: 769 IARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 197/370 (53%), Gaps = 15/370 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L+ R +H I G+A N + + N I+ AY KCG + AR FD + K+ +W +++
Sbjct: 38 QDLESVRQIHDRISGAASAN-VFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSML 96
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHA-FCLK 122
+ Y+QN A+ L+ R+ L+PN ++VL GA A+ + G+ +H+
Sbjct: 97 TAYAQNGHYRAALDLYK---RMDLQPNPVVYTTVL---GACASIEALEEGKAIHSRISGT 150
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEKALR 181
G +V + +SLL MYA+ ++DA LF + + VS WNA+IA +A+ E+A+R
Sbjct: 151 KGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIR 210
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M EP+ +++SV +A ++ G L+QG+ +HA + G +L + N L+ MYA
Sbjct: 211 LYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA 267
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ ++DA K+F RL +RDVVSW++M+ A+ L + ++ KM G+ PN TF
Sbjct: 268 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 327
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL AC+ G L G+ + +G + + VDL G LD A ++
Sbjct: 328 VLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE-NR 386
Query: 362 TAAVWGALLG 371
+W L+G
Sbjct: 387 DEGLWTVLIG 396
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/542 (41%), Positives = 343/542 (63%), Gaps = 2/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ M NT++ +C ++EAR +F+ M +D +TWT +++G +QN A+ +F +M
Sbjct: 214 NVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMR 273
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ +Q+T S+L A GA A ++ G+Q+HA+ ++ YD N++VGS+L+DMY++ +
Sbjct: 274 AEGVGIDQYTFGSILTACGALAASEE-GKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSI 332
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F + KN +SW A+I G+ + GE+A+R FSEM +G +P F+ SV ++
Sbjct: 333 RLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSC 392
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A+ SLE+G H + SG + V + LV +Y K GSIEDA ++F+ + D VS+
Sbjct: 393 ANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYT 452
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
++++G AQ G K T+ FEKML G+ PN VTF+ VL+ACS +GL+++G YF M++
Sbjct: 453 ALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQD 512
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
HG+ + HY +DL R+G L A +FIR+MP P A W LL ACR+ ++E+G +
Sbjct: 513 HGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKW 572
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AAE + + DP + ++LL +++AS G ++ A R+ M++ VKKEP CSW++ KN VH
Sbjct: 573 AAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVH 632
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
+F A+D +HP I++K + ++ K+ + GY PD S VL E+ L HSEKLA+
Sbjct: 633 IFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAI 692
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF LI P I + KN+RVC DCH+A KF SK+ R+I+VRD RFH F +G CSCGD
Sbjct: 693 AFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGD 752
Query: 565 YW 566
+W
Sbjct: 753 FW 754
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 158/277 (57%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +E + +HA+ + + + +I + + +++ Y+KC + A +F M K++++W
Sbjct: 291 CGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISW 350
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GY QN E A+ +FS+M G+KPN FTL SV+ + A+ ++ G Q H L
Sbjct: 351 TAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEE-GAQFHCMAL 409
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V S+L+ +Y + ++DA LF + ++VS+ AL++G+A+ + ++ +
Sbjct: 410 VSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETID 469
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML +G +P ++ V +A + +G +E+G + H+ G L+ ++D+Y
Sbjct: 470 LFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLY 529
Query: 241 AKSGSIEDAEKVFNRLLKR--DVVSWNSMLTGCAQHG 275
++SG +++AE+ F R + R D + W ++L+ C G
Sbjct: 530 SRSGRLKEAEE-FIRQMPRCPDAIGWATLLSACRLRG 565
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 183/479 (38%), Gaps = 125/479 (26%)
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D N++ ++LL A + D LF ++ ++ VS+NALIAG + +A +
Sbjct: 73 DPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRA 132
Query: 186 MLREG-------FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+LRE P+ + S + A ++ G G+ VH +++ G AF + LVD
Sbjct: 133 LLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVD 192
Query: 239 MYAKSGSIEDAEKVFNR-------------------------------LLKRDVVSWNSM 267
MYAK G I DA++VF+ ++ RD ++W +M
Sbjct: 193 MYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTM 252
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM----- 322
+TG Q+GL + F +M G+ +Q TF +LTAC +EG+ A
Sbjct: 253 VTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLY 312
Query: 323 ---------------KKHGVEPEEAHY--------VTFVDLL---GRAGLLDRALKFIRE 356
K + EA + +++ ++ G+ G + A++ E
Sbjct: 313 DGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSE 372
Query: 357 MP---IEPTAAVWGALLGACRMHKNVELGAY----------------------------- 384
M I+P G+++ +C ++E GA
Sbjct: 373 MQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGS 432
Query: 385 --AAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKK----------- 430
A R+F+ P HD + L + YA G+ + + M GVK
Sbjct: 433 IEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSA 492
Query: 431 -------EPACSWVETKNAVHMFVANDDAHPQRAMIHK---KWREISEKIKQIGYVPDS 479
E CS+ + H V DD + ++ + +E E I+Q+ PD+
Sbjct: 493 CSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDA 551
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/620 (38%), Positives = 360/620 (58%), Gaps = 57/620 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L + + +H++ + + D + N +++ YAKCG + +A +F+ M KD+V+W
Sbjct: 269 CASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSW 328
Query: 62 TALISGYSQ------------NDQPEN-----------------------AIILFSQMLR 86
A+++GY+Q N + EN A+ F QM+
Sbjct: 329 NAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMIL 388
Query: 87 LGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLK------------YGYDWNVYVGS 133
G +PN T+ S+L A + GA G + HA+ LK G ++ V +
Sbjct: 389 YGSEPNSVTIISLLSACASLGALSQ--GMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHN 446
Query: 134 SLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+L+DMY++ A +F ++ +N V+W +I G+A+ + AL+ FSEM+ + +
Sbjct: 447 ALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPY 506
Query: 192 E--PTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIE 247
P ++ S + A A SL GK +HA+V + V FV N L+DMY+K G ++
Sbjct: 507 AVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVD 566
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A VF+ + KR+ VSW SM++G HG GK + F+KM + G P+ ++FL +L ACS
Sbjct: 567 TARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS 626
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+G++D+G YF +M+ +GV HY +DLL R+G LD+A K I+EMP+EP+AA+W
Sbjct: 627 HSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIW 686
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
ALL ACR+H NVEL YA ++ + + G + L++NIYA+A R D AR R++MK+S
Sbjct: 687 VALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKS 746
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+KK P CSWV+ K F D +HP I+ + +IK +GYVP+++ L
Sbjct: 747 GIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDV 806
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D +E+ L HSEKLALA+ L++T PG I I KN+RVCGDCHSAF + SK+V+ EIIV
Sbjct: 807 DDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIV 866
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD++RFHHF++G CSCG YW
Sbjct: 867 RDSSRFHHFKNGSCSCGGYW 886
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 207/437 (47%), Gaps = 64/437 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C L + H I + F++++ + N ++ Y++ G L++A +FDE+ + D+
Sbjct: 159 CGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDV 218
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRL------GLKPNQFTLSSVLKASGAGATDDKF 112
++W ++++ + + P A+ LFS+M + + + ++ ++L A + +
Sbjct: 219 ISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQ- 277
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL------ 166
+++H++ ++ G + +V ++L+D YA+ M DA +F +E K+ VSWNA+
Sbjct: 278 TKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQ 337
Query: 167 -----------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
IAG+A++ G++AL TF +M+ G EP +
Sbjct: 338 SGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVT 397
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIK------------SGGQLVAFVGNTLVDMYAKSGS 245
S+ +A AS G+L QG HA+ +K G V N L+DMY+K S
Sbjct: 398 IISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRS 457
Query: 246 IEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLC 301
+ A +FN + + R+VV+W M+ G AQ+G ++ F +M+ +APN T C
Sbjct: 458 FKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISC 517
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPI 359
+L AC+H L G+ A + +H ++V +D+ + G +D A MP
Sbjct: 518 ILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP- 576
Query: 360 EPTAAVWGALLGACRMH 376
+ W +++ MH
Sbjct: 577 KRNEVSWTSMMSGYGMH 593
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 10/329 (3%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++ +Y CG +A + + + V W L+ + + + + AI + +MLR G KP+
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
FTL LKA G + G H G++ NV+V ++L+ MY+R ++DA +F
Sbjct: 149 HFTLPYALKACGE-LPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVF 207
Query: 153 TALESK---NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH------FSYSSVFT 203
+ K + +SWN+++A H + S AL FSEM E S ++
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILP 267
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A AS +L Q K +H++ I++G AFV N L+D YAK GS++DA VFN + +DVVS
Sbjct: 268 ACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVS 327
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+M+TG Q G A F+ M + I + +T+ V+ + G E F M
Sbjct: 328 WNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMI 387
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+G EP ++ + G L + ++
Sbjct: 388 LYGSEPNSVTIISLLSACASLGALSQGME 416
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 10/249 (4%)
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
+G+ ++ Y DA + + V WN L+ H + ++A+ MLR G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P HF+ A S G H + +G + FV N LV MY++SGS+EDA
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 251 KVFNRLLKR---DVVSWNSMLTGCAQHGLGKATVRWFEKM--LRNGIAPNQ----VTFLC 301
VF+ + ++ DV+SWNS++ + + + F +M + + A N+ ++ +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ L + + + ++G + +D + G + A+ M +
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 362 TAAVWGALL 370
+ W A++
Sbjct: 325 VVS-WNAMV 332
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 351/568 (61%), Gaps = 5/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L + R +HA I + D+++QN +L YA+C CLD+A K+F +P +D+V+W
Sbjct: 230 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSW 289
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ +++ D + AI +S+M G++PN +T +SVL A A D + GR VH L
Sbjct: 290 SAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLAC-ASVGDLRAGRAVHDQIL 348
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY + G++L+D+Y + +D+A LF +E+++E W LI G++++ L
Sbjct: 349 GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLE 408
Query: 182 TFSEMLREGFEP-THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV-GNTLVDM 239
+ EM P T YS V +A AS G+ + H+ I++ G + FV +LV+M
Sbjct: 409 LYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD-IEADGMISDFVLATSLVNM 467
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y++ G++E A +VF+++ RD ++W +++ G A+HG + +++M G P+++TF
Sbjct: 468 YSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTF 527
Query: 300 LCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL ACSHAGL ++G Q + ++ + + P AHY +DLL RAG L A + I MP
Sbjct: 528 MVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMP 587
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+EP W +LLGA R+HK+V+ +AA +I +LDP D ++LL+N++A G L A
Sbjct: 588 VEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMAS 647
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R M GVKK SW+E + +H F D++HP+ I + + +S KIK+ GYVP+
Sbjct: 648 VRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPE 707
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
S VL ++E+E L++HSEKLA+AF LI+T PG+T+ I +R+C DCHSA KF S
Sbjct: 708 SEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISA 767
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ REIIVRD++RFH FRDG CSCGDYW
Sbjct: 768 IARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 196/367 (53%), Gaps = 10/367 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L+ R +H I G+A N + + N I+ AY KCG + AR FD + K+ +W +++
Sbjct: 38 QDLESVRQIHDRISGAASAN-VFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSML 96
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA-FCLKYG 124
+ Y+QN A+ L+ R+ L+PN ++VL A + ++ G+ +H+ G
Sbjct: 97 TAYAQNGHYRAALDLYK---RMDLQPNPVVYTTVLGACASIKALEE-GKAIHSRISGTKG 152
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+V + +SLL MYA+ ++DA LF + ++ SWNA+IA +A+ E+A+R +
Sbjct: 153 LKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYE 212
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M EP+ +++SV +A ++ G L+QG+ +HA + G +L + N L+ MYA+
Sbjct: 213 DM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCK 269
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++DA K+F RL +RDVVSW++M+ A+ L + ++ KM G+ PN TF VL
Sbjct: 270 CLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLL 329
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+ G L G+ + +G + + VDL G LD A ++
Sbjct: 330 ACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE-NRDEG 388
Query: 365 VWGALLG 371
+W L+G
Sbjct: 389 LWTVLIG 395
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/577 (39%), Positives = 352/577 (61%), Gaps = 15/577 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + H +++DI + + ++ Y+ CG L++ARK+FDE+P +++V+W
Sbjct: 86 CSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR------- 114
T++I GY N +A+ LF +L ++ N + L + G + R
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLL---IEENDDDATMFLDSMGMVSVISACSRVAAKGLT 202
Query: 115 -QVHAFCLKYGYDWNVYVGSSLLDMYARFDQ--MDDAWFLFTALESKNEVSWNALIAGHA 171
+H+F +K G+D V VG++LLD YA+ + + A +F + K+ VS+N++++ +A
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 172 RKSEGEKALRTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ +A F +++E + + S+V A++ +G+L GK +H VI+ G +
Sbjct: 263 QSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
VG +++DMY K G +E A F+R+ ++V SW +M+ G HG + F M+ +
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ PN +TF+ VL ACSHAGL D G +F MK + GVEP HY VDLLGRAG L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A I++M +EP + +W +LL ACR+HKNVEL + R+FELDP + G ++LL++IYA
Sbjct: 443 AYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYAD 502
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
+GR D R R MK G+ K P S +E VH+F+ D+ HPQR I++ E++ K
Sbjct: 503 SGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
+ + GYV ++S V D++E+E L+VHSEKLA+AF +++T PGST+++ KN+RVC DC
Sbjct: 563 LLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+ K SK+V+RE +VRD RFHHF+DGFCSCGDYW
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 135/326 (41%), Gaps = 49/326 (15%)
Query: 151 LFTALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF K +V SWN++IA AR + +ALR FS M + PT S+ A +S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ GK H G Q FV + L+ MY+ G +EDA KVF+ + KR++VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFL------CVLTACSHAG------------- 310
G +G V F+ +L + FL V++ACS
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210
Query: 311 -------------LLDE----GQGYFALMKK---HGVEPEEAHYVTFVDLLGRAGLLDRA 350
LLD G+G A+ +K V+ + Y + + + ++G+ + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 351 L----KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS---GPHILL 403
+ I+E + +L A + +G +++ + D G I+
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII- 329
Query: 404 ANIYASAGRLNDAARARKMMKESGVK 429
++Y GR+ A A MK V+
Sbjct: 330 -DMYCKCGRVETARLAFDRMKNKNVR 354
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/544 (41%), Positives = 327/544 (60%), Gaps = 2/544 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
K ++ N ++ Y K G L+ ARKLFDEMP +++ TW A+++G + + E ++ F
Sbjct: 105 KRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFA 164
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G++P+++ L S+ + AG D GRQVHA+ ++ G D ++ VGSSL MY R
Sbjct: 165 MRREGMQPDEYGLGSLFRCC-AGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 223
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ D AL S N VS N I+G + + E AL F M G E ++ S T
Sbjct: 224 FLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVT 283
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ + +L QG+ +HA IK+G V V +LV MY++ G + D+E+V D+V
Sbjct: 284 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 343
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++M++ HG G+ V F++M+ G PN+VTFL +L ACSH+GL DEG F LM
Sbjct: 344 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 403
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +G++P HY VDLLGR+G L+ A I MP++P +W LL AC+ K ++
Sbjct: 404 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 463
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AER+ ELDPHDS ++LL+NI A++ R D ++ R+ M+E V+KEP SWVE K
Sbjct: 464 ERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQ 523
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+H F D++H ++ I + E+ +I+Q GY PD S V + +E+E L HSEKL
Sbjct: 524 IHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKL 583
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AFA +S P G I + KN+RVC DCH A K SKV+ REI+VRD +RFHHF+DG CSC
Sbjct: 584 AIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSC 643
Query: 563 GDYW 566
GDYW
Sbjct: 644 GDYW 647
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + R VHA+++ S D+ + +++ + Y +CG L + +P ++V+
Sbjct: 184 CAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSC 243
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFT-LSSVLKASGAGATDDKFGRQVHAFC 120
ISG +QN E A+ F M G++ N T +S+V S A G+Q+HA
Sbjct: 244 NTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ--GQQIHALA 301
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G D V V +SL+ MY+R + D+ + + V +A+I+ + G+KA+
Sbjct: 302 IKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAV 361
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDM 239
F +M+ G EP ++ ++ A + +G ++G + K+ G + T +VD+
Sbjct: 362 GLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDL 421
Query: 240 YAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+SG + +AE + + ++ D V W ++L+ C
Sbjct: 422 LGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC 454
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/537 (42%), Positives = 324/537 (60%), Gaps = 2/537 (0%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N ++ Y K G L+ ARKLFDEMP +++ TW A+++G + + E ++ F M R G++
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+++ L S+ + AG D GRQVHA+ ++ G D ++ VGSSL MY R + D
Sbjct: 64 PDEYGLGSLFRCC-AGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
AL S N VS N I+G + + E AL F M G E ++ S T+ + +
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L QG+ +HA IK+G V V +LV MY++ G + D+E+V D+V ++M++
Sbjct: 183 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 242
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEP 329
HG G+ V F++M+ G PN+VTFL +L ACSH+GL DEG F LM K +G++P
Sbjct: 243 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 302
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VDLLGR+G L+ A I MP++P +W LL AC+ K ++ AER+
Sbjct: 303 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERV 362
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
ELDPHDS ++LL+NI A++ R D ++ R+ M+E V+KEP SWVE K +H F
Sbjct: 363 IELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 422
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D++H ++ I + E+ +I+Q GY PD S V + +E+E L HSEKLA+AFA +
Sbjct: 423 DESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFL 482
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S P G I + KN+RVC DCH A K SKV+ REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 483 SLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + R VHA+++ S D+ + +++ + Y +CG L + +P ++V+
Sbjct: 76 CAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSC 135
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFT-LSSVLKASGAGATDDKFGRQVHAFC 120
ISG +QN E A+ F M G++ N T +S+V S A G+Q+HA
Sbjct: 136 NTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ--GQQIHALA 193
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G D V V +SL+ MY+R + D+ + + V +A+I+ + G+KA+
Sbjct: 194 IKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAV 253
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDM 239
F +M+ G EP ++ ++ A + +G ++G + K+ G + T +VD+
Sbjct: 254 GLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDL 313
Query: 240 YAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+SG + +AE + + ++ D V W ++L+ C
Sbjct: 314 LGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC 346
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/541 (41%), Positives = 340/541 (62%), Gaps = 2/541 (0%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ M NT++ +C +++A+ LF M +D +TWT +++G +QN A+ +F +M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G+ +Q+T S+L A GA A ++ G+Q+HA+ + Y+ NV+VGS+L+DMY++ +
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEE-GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIR 330
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F + +N +SW A+I G+ + + E+A+R FSEM +G +P F+ SV ++ A
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ SLE+G H + SG V N LV +Y K GSIEDA ++F+ + D VSW +
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 450
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-H 325
++TG AQ G K T+ FEKML NG+ P+ VTF+ VL+ACS AGL+++G YF M+K H
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G+ P + HY +DL R+G A +FI++MP P A W LL +CR+ N+E+G +A
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
AE + E DP + ++LL +++A+ G+ + A R+ M++ VKKEP CSW++ KN VH+
Sbjct: 571 AENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHI 630
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F A+D +HP + I++K ++ K+ + GY PD S VL ++ + HSEKLA+A
Sbjct: 631 FSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIA 690
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F LI P I I KN+RVC DCH+A KF SK+ R+I+VRD RFH F DG CSCGD+
Sbjct: 691 FGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDF 750
Query: 566 W 566
W
Sbjct: 751 W 751
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 227/489 (46%), Gaps = 61/489 (12%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-G 88
+N +L+A A + + +LF MP +D V++ ALI+G+S P ++ L+ +LR
Sbjct: 82 RNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREES 141
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
++P + TLS+++ + A +D G VH L+ G+ +VGS L+DMYA+ + DA
Sbjct: 142 VRPTRITLSAMIMVASA-LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDA 200
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGE------------------------------- 177
+F +E+K V +N LI G R E
Sbjct: 201 RRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQL 260
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M EG +++ S+ TA + +LE+GK +HA++ ++ + FVG+ LV
Sbjct: 261 EALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALV 320
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY+K SI AE VF R+ R+++SW +M+ G Q+ + VR F +M +GI P+
Sbjct: 321 DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDF 380
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKF 353
T V+++C++ L+EG + L G+ Y+T V L G+ G ++ A +
Sbjct: 381 TLGSVISSCANLASLEEGAQFHCLALVSGL----MRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
EM + W AL+ + E++ G + G L
Sbjct: 437 FDEMSFHDQVS-WTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFI--------GVL 487
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK---KWREISEKI 470
+ +RA + E C + ++ H V DD + ++ +++E E I
Sbjct: 488 SACSRAGLV--------EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFI 539
Query: 471 KQIGYVPDS 479
KQ+ + PD+
Sbjct: 540 KQMPHSPDA 548
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 152/276 (55%), Gaps = 3/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+E + +HA+I + +++++ + + +++ Y+KC + A +F M +++++W
Sbjct: 288 CGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISW 347
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GY QN E A+ FS+M G+KP+ FTL SV+ + A+ ++ G Q H L
Sbjct: 348 TAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE-GAQFHCLAL 406
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++DA LF + ++VSW AL+ G+A+ + ++ +
Sbjct: 407 VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETID 466
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMY 240
F +ML G +P ++ V +A + G +E+G + K G + + ++D+Y
Sbjct: 467 LFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLY 526
Query: 241 AKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHG 275
++SG ++AE+ ++ D W ++L+ C G
Sbjct: 527 SRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D N++ ++LL A + D LF ++ ++ VS+NALI G + ++++ +
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 186 MLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+LRE PT + S++ ++ G VH V++ G AFVG+ LVDMYAK G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 245 SIEDAEKVFNR-------------------------------LLKRDVVSWNSMLTGCAQ 273
I DA +VF ++ RD ++W +M+TG Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+GL + F +M G+ +Q TF +LTAC L+EG+ A + + E
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFV 315
Query: 334 YVTFVDLLGRAGLLDRALKFIREMP----IEPTAAVWGALLGAC 373
VD+ + + A R M I TA + G AC
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC 359
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 59/230 (25%)
Query: 198 YSSVFTALASTGS---LEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGS-------- 245
Y+++ ++ A G + VH ++K+ Q F+ N L+ YAKSG
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 246 -----------------------IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+ D E++F + +RD VS+N+++TG + G +V+
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 283 WFEKMLR-NGIAPNQVTFLCVLTACS-----------HAGLLDEGQGYFALMKKHGVEPE 330
+ +LR + P ++T ++ S H +L G G +A +
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGS------ 185
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
VD+ + GL+ A + +EM + T ++ L+ K +E
Sbjct: 186 -----PLVDMYAKMGLIRDARRVFQEMEAK-TVVMYNTLITGLLRCKMIE 229
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/583 (39%), Positives = 366/583 (62%), Gaps = 22/583 (3%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ R +HAHI + + D ++ N+++ Y+KC + +AR++F+ + ++D+++W ++
Sbjct: 340 LSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSM 399
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG---AGATDDKFGRQVHAFCL 121
++GY QN+Q +F +M+ G++P+ +L+ + A+ +G + G+++H + L
Sbjct: 400 LAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYIL 459
Query: 122 KYGYDWNVY--VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ V V +++L MYA+F+++ DA +F +++++ SWNA++ G++R ++ E
Sbjct: 460 RRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDV 519
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS-GGQ------LVAFV 232
L F ++L++GF H S S + T+ SL+ GK HA V K GQ + +
Sbjct: 520 LMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSI 579
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N L+ MY+K GSI+DA +VF ++ ++DV SW +M+TGCA HGL ++ FE+M +GI
Sbjct: 580 NNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGI 639
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
PNQVTFL +L AC+H GL+ EG YF ++ +G+ P HY +DL GR+G DRA
Sbjct: 640 KPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRA- 698
Query: 352 KFIREMPI-------EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
K + E I + +W LLGAC K ++LG AA +I EL+P D +ILLA
Sbjct: 699 KSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLA 758
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
N+YAS+G DA + RK M++ G++KE CSW++T N H+FVA D HPQR I++K
Sbjct: 759 NLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLA 818
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS-TIHIKKNI 523
+++ +++GYVP + VL D+ E+EA L HSEKLA++F L++ G+ I + KN+
Sbjct: 819 QLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNL 878
Query: 524 RVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
RVC DCHS KFAS + +REI++RD+ RFH FRDG CSCGDYW
Sbjct: 879 RVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 184/335 (54%), Gaps = 8/335 (2%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A++LFD P +D+++W+ALI+ YS+ A LF +M+ GL+PN F+L+S+LK
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF--TALESKNE 160
S + RQ+H + ++ G+ + + ++ + MY+R ++DA +F T+L + +
Sbjct: 131 S-CSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHA 219
+ WN++IA + + LR F +M+ G PT +Y+SV A S+G + G VH
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+IK+G + + N+LV Y K G+++ A ++F R+ ++DVVSWN+M+ Q G G+
Sbjct: 250 RIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308
Query: 280 TVRWFEKMLR--NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
+ F +ML+ + PN+VTFL +L+A S L G+ A + + +E + + +
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + + +A + + + + W ++L
Sbjct: 369 ITFYSKCREVGKAREIFERLLLRDIIS-WNSMLAG 402
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 199/383 (51%), Gaps = 18/383 (4%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K +VH I+ + + + N+++ Y KCG L A +LF+ + KD+V+W A+I+
Sbjct: 242 KYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAAN 300
Query: 69 SQNDQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Q + ENA+ LF +ML++ ++PN+ T S+L A +G + + GR++HA + +
Sbjct: 301 EQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAV-SGLSALRCGREIHAHIFRLSLE 359
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ + +SL+ Y++ ++ A +F L ++ +SWN+++AG+ + + + F M
Sbjct: 360 VDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRM 419
Query: 187 LREGFEPTHFSYSSVFTALASTGS----LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMY 240
+ G EP S + +F A + S +GK +H ++++ + G + V N ++ MY
Sbjct: 420 MLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMY 479
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK I DAEK+F + RD SWN+M+ G +++ + + F +L+ G + V+
Sbjct: 480 AKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLS 539
Query: 301 CVLTACSHAGLLDEGQGYFALMKK--HGVE-PEEAHYVT----FVDLLGRAGLLDRALKF 353
+LT+C L G+ + A++ K +G + P + ++ + + + G + A +
Sbjct: 540 ILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQV 599
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
+M + + W A++ C H
Sbjct: 600 FLKMERKDVFS-WTAMITGCAHH 621
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK--DMVTWTALISGYS 69
R +H + + F D ++ + Y++CG L++A+++FDE + D++ W ++I+ Y
Sbjct: 141 RQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYI 200
Query: 70 QNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD-- 126
+ + LF +M+ +G+ P + T +SV+ A G+ ++K+G VH +K G +
Sbjct: 201 FHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSG-EEKYGAMVHGRIIKAGLEAT 259
Query: 127 --WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
WN SL+ Y + + A LF + K+ VSWNA+IA + ++ EGE AL F
Sbjct: 260 NLWN-----SLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFR 314
Query: 185 EMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
ML+ +P ++ S+ +A++ +L G+ +HAH+ + ++ + N+L+ Y+K
Sbjct: 315 RMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSK 374
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
+ A ++F RLL RD++SWNSML G Q+ F++M+ +GI P+ + +
Sbjct: 375 CREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTII 434
Query: 303 LTACS 307
A S
Sbjct: 435 FNAAS 439
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 5/247 (2%)
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF +++ +SW+ALIA ++R +A F +M+ EG +P FS +S+ STG
Sbjct: 77 LFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGE 136
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR--LLKRDVVSWNSML 268
+ + +H I++G L + + + MY++ G +EDA++VF+ LL D++ WNS++
Sbjct: 137 IGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSII 196
Query: 269 TGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
HG +R F KM+ G +AP ++T+ V+ AC +G G + K G+
Sbjct: 197 AAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGL 256
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
E + + V G+ G L A + + + + W A++ A E
Sbjct: 257 EATNL-WNSLVTFYGKCGNLQHASQLFERISRKDVVS-WNAMIAANEQRGEGENALGLFR 314
Query: 388 RIFELDP 394
R+ +++P
Sbjct: 315 RMLKVEP 321
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/561 (41%), Positives = 347/561 (61%), Gaps = 9/561 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVTWTALISGYSQND 72
+H+ + S F + +++ N +L Y K G LD+A+++F M ++D V+W ++I Y Q+
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ LF +M+R GL + FTL+SVL A D G Q H +K G+ N +VG
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC-LEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 133 SSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSEG-EKALRTFSEMLREG 190
S L+D+Y++ M D +F + + V WN +++G+++ E E AL F +M G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSGSIEDA 249
+ P S+ V +A ++ S QGK +H+ +KS V N L+ MY+K G+++DA
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
++F+R+ + + VS NSM+ G AQHG+ ++ F+ ML IAP +TF+ VL+AC+H
Sbjct: 399 RRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHT 458
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G ++EG YF +MK K +EPE HY +DLLGRAG L A I MP P + W +
Sbjct: 459 GRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWAS 518
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGACR H N+EL AA ++ +L+P ++ P+++L+N+YASAGR + A RK M++ GV
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK+P CSW+E K +H+FVA D +HP I++ E+S K+K+ GYVPD L D
Sbjct: 579 KKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDG 638
Query: 489 Q---EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
E+E +L HSEKLA+AF LIST G + + KN+R+CGDCH+A KF S + REI
Sbjct: 639 TRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREIT 698
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD +RFH F++G CSCGDYW
Sbjct: 699 VRDAHRFHCFKEGQCSCGDYW 719
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 202/403 (50%), Gaps = 15/403 (3%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N I+ AYAK A +LFD++P D+V++ LIS Y+ + A+ LFS M +GL
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS+V+ A D Q+H+ + G+D V V ++LL Y + +DDA
Sbjct: 138 MDGFTLSAVITAC---CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKR 194
Query: 151 LFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + ++EVSWN++I + + EG KAL F EM+R G F+ +SV TA
Sbjct: 195 VFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLE 254
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSML 268
L G H +IK+G + VG+ L+D+Y+K G + D KVF + + D+V WN+M+
Sbjct: 255 DLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMV 314
Query: 269 TGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+G +Q+ + + F +M G PN +F+CV++ACS+ +G+ +L K +
Sbjct: 315 SGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDI 374
Query: 328 EPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE---LG 382
P V + + + G L A + M T ++ + G + +E L
Sbjct: 375 -PSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLF 433
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
+ ER ++ P S I + + A GR+ + MMKE
Sbjct: 434 QWMLER--QIAP-TSITFISVLSACAHTGRVEEGWNYFNMMKE 473
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 174/333 (52%), Gaps = 11/333 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC-GCLDEARKLFDEMPVKDMVTW 61
T L+ L H ++ + F + + + +++ Y+KC G + + RK+F+E+ D+V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 62 TALISGYSQNDQ-PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++SGYSQN++ E+A+ F QM +G +PN + V+ A ++ + G+Q+H+
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ-GKQIHSLA 369
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK N + V ++L+ MY++ + DA LF + N VS N++IAG+A+ ++
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL--VAFVGNTLV 237
L F ML PT ++ SV +A A TG +E+G W + +++K + A + ++
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-N 295
D+ ++G + +AE + R+ + W S+L C HG + V+ ++L+ + P N
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LEPSN 546
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
++ + + AG +E M+ GV+
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVK 579
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D NV+ ++++ YA+ + A LF + + VS+N LI+ +A E AL FS
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 186 MLREGFEPTHFSYSSVFTALA-STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G + F+ S+V TA G + Q +H+ + SG V N L+ Y K+G
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNG 187
Query: 245 SIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
++DA++VF + RD VSWNSM+ QH G + F++M+R G+ + T VL
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
TA + L G + + K G +DL + G + + E EP
Sbjct: 248 TAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 364 AVWGALL 370
+W ++
Sbjct: 308 VLWNTMV 314
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/585 (40%), Positives = 341/585 (58%), Gaps = 37/585 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + + + +YA G LD + LF + WTA+I G++
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ ++QML G++PN FT SS+LK + G+ +H+ +K G+D ++YV +
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTFSSILKLCPI-----EPGKALHSQAVKLGFDSDLYVRT 163
Query: 134 SLLDMYAR----------FDQM---------------------DDAWFLFTALESKNEVS 162
LLD+YAR FD M D A LF +E ++ V
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN +I G+ + +AL F ML+ +P + SV +A G+LE G+WVH+++
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+G Q VG LVDMY+K GS+EDA VF+++ +DVV+WNSM+ G A HG + ++
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLL 341
F+ M R G+ P +TF+ +L+AC H+G + EG F MK ++G+EP+ HY V+LL
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 403
Query: 342 GRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI 401
GRAG +++A + ++ M IEP +WG LLGACR+H + LG E + + + +SG +I
Sbjct: 404 GRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 463
Query: 402 LLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK 461
LL+NIYA+ G + AR R MMK+SGVKKEP CS +E N VH F+A HP+R I+
Sbjct: 464 LLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYM 523
Query: 462 KWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKK 521
EI+ +K GY P + VL + E+E L+VHSEKLA+AF LI+T PG+TI I K
Sbjct: 524 MLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVK 583
Query: 522 NIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
N+RVC DCH K SK+ R+I+VRD NRFHHF +G CSCGDYW
Sbjct: 584 NLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 182/361 (50%), Gaps = 39/361 (10%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT---- 60
L ++ + +H+ + F +D+ ++ +L+ YA+ G + A++LFD MP K +V+
Sbjct: 137 LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAM 196
Query: 61 ---------------------------WTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
W +I GY+QN P A++LF +ML+ KPN+
Sbjct: 197 LTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNE 256
Query: 94 FTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
T+ SVL A G GA + GR VH++ G +NV+VG++L+DMY++ ++DA +F
Sbjct: 257 VTVLSVLSACGQLGALES--GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 314
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
++ K+ V+WN++I G+A ++AL+ F M R G PT+ ++ + +A +G +
Sbjct: 315 DKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 374
Query: 213 QGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLT 269
+G W + +K + + + +V++ ++G +E A E V N ++ D V W ++L
Sbjct: 375 EG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLG 433
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
C HG + E ++ +A N T++ + + G D +MK GV+
Sbjct: 434 ACRLHGKIALGEKIVELLVDQNLA-NSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKK 492
Query: 330 E 330
E
Sbjct: 493 E 493
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA ++G D + + L YA ++D + LF ++ + W A+I GHA +
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
E+AL +++ML +G EP F++SS+ +E GK +H+ +K G +V
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163
Query: 235 TLVDMYAKSGSIEDAEKVFN--------------------------RLL-----KRDVVS 263
L+D+YA+ G + A+++F+ R+L +RD V
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN M+ G Q+G+ + F +ML+ PN+VT L VL+AC G L+ G+ + ++
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+G++ VD+ + G L+ A + + + + W +++ MH
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDA-RLVFDKIDDKDVVAWNSMIVGYAMH 335
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VH++I + + ++ + +++ Y+KCG L++AR +FD++ KD+V W
Sbjct: 266 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 325
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY+ + + A+ LF M R+GL P T +L A G + +
Sbjct: 326 NSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 385
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
+YG + + ++++ R ++ A+ L + + V W L+ H + + GE
Sbjct: 386 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 445
Query: 178 KALRTFSE 185
K + +
Sbjct: 446 KIVELLVD 453
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 344/554 (62%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHA +L S ++ + N++L+ Y+KC CLD+ R+LFDEMP +D V++ +I+ Y+ N
Sbjct: 258 VHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC 317
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ LF +M +LG +++L +G+ D G+Q+HA + G +G+
Sbjct: 318 AATVLRLFREMQKLGFDRQVLPYATMLSVAGS-LPDVHIGKQIHAQLVLLGLASEDLLGN 376
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMY++ +D A F+ K+ +SW ALI G+ + + E+AL+ FS+M R G P
Sbjct: 377 ALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRP 436
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++SS+ A +S + G+ +H+++I+SG + F G+ LVDMYAK G +++A + F
Sbjct: 437 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + +R+ +SWN++++ A +G K ++ FE ML G P+ VTFL VL ACSH GL D
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E YF LMK ++ + P + HY +D LGR G + K + EMP + +W ++L +
Sbjct: 557 ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H N EL AA+++F ++P D+ P+++L+NIYA AG+ DAA +K+M++ GV+KE
Sbjct: 617 CRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKES 676
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWVE K ++ F +ND P I + + +++ + GY PD + L D + +
Sbjct: 677 GYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKL 736
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L+ HSE+LA+AFAL++TP G+ I I KN+ C DCH+ K SK+V R+IIVRD+ RF
Sbjct: 737 ESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRF 796
Query: 553 HHFRDGFCSCGDYW 566
HHF+DG CSCGDYW
Sbjct: 797 HHFKDGVCSCGDYW 810
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 183/342 (53%), Gaps = 2/342 (0%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+AY K G L AR++F EM KD VT+ A++ G S+ A+ LF+ M R G+
Sbjct: 174 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIP 233
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
FT SS+L + AG G QVHA L+ NV+V +SLLD Y++ D +DD
Sbjct: 234 ATHFTFSSILTVA-AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRR 292
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + ++ VS+N +IA +A LR F EM + GF+ Y+++ + S
Sbjct: 293 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 352
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+ GK +HA ++ G +GN L+DMY+K G ++ A+ F+ ++ +SW +++TG
Sbjct: 353 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 412
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q+G + ++ F M R G+ P++ TF ++ A S ++ G+ + + + G +
Sbjct: 413 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 472
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
VD+ + G LD AL+ EMP E + W A++ A
Sbjct: 473 VFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 175/340 (51%), Gaps = 7/340 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N IL+AY+ G L A+ LF P ++ TWT ++ ++ + +A+ LF ML G+
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+++VL G +H F +K+G D +V+V ++LLD Y + + A
Sbjct: 138 PDRVTVTTVLNLPGCTVP------SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 191
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + K+ V++NA++ G +++ +AL+ F+ M R G THF++SS+ T A
Sbjct: 192 VFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAH 251
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L G VHA V++S L FV N+L+D Y+K ++D ++F+ + +RD VS+N ++
Sbjct: 252 LLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAA 311
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A + +R F +M + G + + +L+ + G+ A + G+ E
Sbjct: 312 YAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE 371
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ +D+ + G+LD A E +A W AL+
Sbjct: 372 DLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALI 410
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++ + +L Y+ + A LF + +N +W ++ HA AL F ML
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P + ++V T +H IK G FV NTL+D Y K G +
Sbjct: 133 GEGVIPDRVTVTTVLNLPGCT-----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +VF + +D V++N+M+ GC++ GL ++ F M R GI TF +LT +
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L G AL+ + + +D + LD + EMP
Sbjct: 248 GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP 298
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 9/214 (4%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H++++ S +K+ + + +++ YAKCGCLDEA + FDEMP ++ ++W A+IS Y+
Sbjct: 458 RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHY 517
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD-WNVY 130
+ +NAI +F ML G P+ T SVL A D+ + H +Y W +
Sbjct: 518 GEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEH 577
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ ++D R + + K + + W +++ H+ + G + L +
Sbjct: 578 Y-ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL--HSCRIHGNQELARVAADKLF 634
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
G EPT + + + + + G+W A +K
Sbjct: 635 GMEPTDATPYVILSNIYA----RAGQWEDAACVK 664
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/561 (41%), Positives = 347/561 (61%), Gaps = 9/561 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVTWTALISGYSQND 72
+H+ + S F + +++ N +L Y K G LD+A+++F M ++D V+W ++I Y Q+
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ LF +M+R GL + FTL+SVL A D G Q H +K G+ N +VG
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC-LEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 133 SSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSEG-EKALRTFSEMLREG 190
S L+D+Y++ M D +F + + V WN +++G+++ E E AL F +M G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSGSIEDA 249
+ P S+ V +A ++ S QGK +H+ +KS V N L+ MY+K G+++DA
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
++F+R+ + + VS NSM+ G AQHG+ ++ F+ ML IAP +TF+ VL+AC+H
Sbjct: 399 RRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHT 458
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G ++EG YF +MK K +EPE HY +DLLGRAG L A I MP P + W +
Sbjct: 459 GRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWAS 518
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGACR H N+EL AA ++ +L+P ++ P+++L+N+YASAGR + A RK M++ GV
Sbjct: 519 LLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK+P CSW+E K +H+FVA D +HP I++ E+S K+K+ GYVPD L D
Sbjct: 579 KKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDG 638
Query: 489 Q---EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
E+E +L HSEKLA+AF LIST G + + KN+R+CGDCH+A KF S + REI
Sbjct: 639 TRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREIT 698
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD +RFH F++G CSCGDYW
Sbjct: 699 VRDAHRFHCFKEGQCSCGDYW 719
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 202/403 (50%), Gaps = 15/403 (3%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N I+ AYAK A +LFD++P D+V++ LIS Y+ + A+ LFS M +GL
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS+V+ A D Q+H+ + G+D V V ++LL Y + +DDA
Sbjct: 138 MDXFTLSAVITAC---CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKR 194
Query: 151 LFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + ++EVSWN++I + + EG KAL F EM+R G F+ +SV TA
Sbjct: 195 VFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLE 254
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSML 268
L G H +IK+G + VG+ L+D+Y+K G + D KVF + + D+V WN+M+
Sbjct: 255 DLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMV 314
Query: 269 TGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+G +Q+ + + F +M G PN +F+CV++ACS+ +G+ +L K +
Sbjct: 315 SGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDI 374
Query: 328 EPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE---LG 382
P V + + + G L A + M T ++ + G + +E L
Sbjct: 375 -PSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLF 433
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
+ ER ++ P S I + + A GR+ + MMKE
Sbjct: 434 QWMLER--QIAP-TSITFISVLSACAHTGRVEEGWNYFNMMKE 473
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 174/333 (52%), Gaps = 11/333 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC-GCLDEARKLFDEMPVKDMVTW 61
T L+ L H ++ + F + + + +++ Y+KC G + + RK+F+E+ D+V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 62 TALISGYSQNDQ-PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++SGYSQN++ E+A+ F QM +G +PN + V+ A ++ + G+Q+H+
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQ-GKQIHSLA 369
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK N + V ++L+ MY++ + DA LF + N VS N++IAG+A+ ++
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL--VAFVGNTLV 237
L F ML PT ++ SV +A A TG +E+G W + +++K + A + ++
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-N 295
D+ ++G + +AE + R+ + W S+L C HG + V+ ++L+ + P N
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LEPSN 546
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
++ + + AG +E M+ GV+
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVK 579
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D NV+ ++++ YA+ + A LF + + VS+N LI+ +A E AL FS
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 186 MLREGFEPTHFSYSSVFTALA-STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G + F+ S+V TA G + Q +H+ + SG V N L+ Y K+G
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNG 187
Query: 245 SIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
++DA++VF + RD VSWNSM+ QH G + F++M+R G+ + T VL
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
TA + L G + + K G +DL + G + + E EP
Sbjct: 248 TAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL 307
Query: 364 AVWGALL 370
+W ++
Sbjct: 308 VLWNTMV 314
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 351/553 (63%), Gaps = 1/553 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H +++ S + N ++N Y+K ++R+ F++ P K TW+++IS ++QN+
Sbjct: 37 LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNEL 96
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P ++ +M+ L+P+ L S K+ + D GR VH +K GYD +V+VGS
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD-IGRSVHCLSMKTGYDADVFVGS 155
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ ++ A +F + +N V+W+ ++ G+A+ E E+AL F E L E
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+S+SSV + A++ LE G+ +H IKS +FVG++LV +Y+K G E A +VF
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +++ WN+ML AQH + + F++M +G+ PN +TFL VL ACSHAGL+D
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
EG+ YF MK+ +EP + HY + VD+LGRAG L AL+ I MPI+PT +VWGALL +C
Sbjct: 336 EGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSC 395
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
+HKN EL A+AA+++FEL P SG HI L+N YA+ GR DAA+ARK++++ G KKE
Sbjct: 396 TVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETG 455
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
SWVE +N VH F A + H + I++K E+ E++++ GY+ D+S+VL D E+
Sbjct: 456 LSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQ 515
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
++ HSE+LA+AF LI+ P I + KN+RVCGDCH+A KF S R IIVRD NRFH
Sbjct: 516 TIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFH 575
Query: 554 HFRDGFCSCGDYW 566
F DG CSC DYW
Sbjct: 576 RFEDGKCSCNDYW 588
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 151/274 (55%), Gaps = 2/274 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VH + + + D+ + +++++ YAKCG + ARK+FDEMP +++VTW
Sbjct: 126 CAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTW 185
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ ++ GY+Q + E A+ LF + L L N ++ SSV+ A +T + GRQ+H +
Sbjct: 186 SGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVC-ANSTLLELGRQIHGLSI 244
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K +D + +VGSSL+ +Y++ + A+ +F + KN WNA++ +A+ S +K +
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIE 304
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P ++ +V A + G +++G++ + +S + +LVDM
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLG 364
Query: 242 KSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
++G +++A E + N + W ++LT C H
Sbjct: 365 RAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 1/268 (0%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G Q+H + +K G V ++L++ Y++ D+ F K+ +W+++I+ A+
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+L +M+ P S + A + G+ VH +K+G FV
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G++LVDMYAK G I A K+F+ + +R+VV+W+ M+ G AQ G + + F++ L +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
A N +F V++ C+++ LL+ G+ L K + + V L + G+ + A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVE 380
E+P++ +W A+L A H + +
Sbjct: 274 VFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 191 FEPTHFSYSSVFTAL---ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
F P H +Y+ + L A T S +G +H +V+KSG L+ V N L++ Y+KS
Sbjct: 9 FVPCH-NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPF 67
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
D+ + F ++ +W+S+++ AQ+ L ++ + +KM+ + P+ +C+
Sbjct: 68 DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA 127
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
D G+ L K G + + + VD+ + G + A K EMP G
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSG 187
Query: 368 ALLGACRMHKNVELGAYAAERIFE 391
+ G +M +N E E +FE
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFE 211
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 344/554 (62%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHA +L S ++ + N++L+ Y+KC CLD+ R+LFDEMP +D V++ +I+ Y+ N
Sbjct: 258 VHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQC 317
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ LF +M +LG +++L +G+ D G+Q+HA + G +G+
Sbjct: 318 AATVLRLFREMQKLGFDRQVLPYATMLSVAGS-LPDVHIGKQIHAQLVLLGLASEDLLGN 376
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMY++ +D A F+ K+ +SW ALI G+ + + E+AL+ FS+M R G P
Sbjct: 377 ALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRP 436
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++SS+ A +S + G+ +H+++I+SG + F G+ LVDMYAK G +++A + F
Sbjct: 437 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + +R+ +SWN++++ A +G K ++ FE ML G P+ VTFL VL ACSH GL D
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E YF LMK ++ + P + HY +D LGR G + K + EMP + +W ++L +
Sbjct: 557 ECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHS 616
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H N EL AA+++F ++P D+ P+++L+NIYA AG+ DAA +K+M++ GV+KE
Sbjct: 617 CRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKES 676
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWVE K ++ F +ND P I + + +++ + GY PD + L D + +
Sbjct: 677 GYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKL 736
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L+ HSE+LA+AFAL++TP G+ I I KN+ C DCH+ K SK+V R+IIVRD+ RF
Sbjct: 737 ESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRF 796
Query: 553 HHFRDGFCSCGDYW 566
HHF+DG CSCGDYW
Sbjct: 797 HHFKDGVCSCGDYW 810
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 183/342 (53%), Gaps = 2/342 (0%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+AY K G L AR++F EM KD VT+ A++ G S+ A+ LF+ M R G+
Sbjct: 174 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIP 233
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
FT SS+L + AG G QVHA L+ NV+V +SLLD Y++ D +DD
Sbjct: 234 ATHFTFSSILTVA-AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRR 292
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + ++ VS+N +IA +A LR F EM + GF+ Y+++ + S
Sbjct: 293 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 352
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+ GK +HA ++ G +GN L+DMY+K G ++ A+ F+ ++ +SW +++TG
Sbjct: 353 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 412
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q+G + ++ F M R G+ P++ TF ++ A S ++ G+ + + + G +
Sbjct: 413 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 472
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
VD+ + G LD AL+ EMP E + W A++ A
Sbjct: 473 VFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 175/340 (51%), Gaps = 7/340 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N IL+AY+ G L A+ LF P ++ TWT ++ ++ + +A+ LF ML G+
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+++VL G +H F +K+G D +V+V ++LLD Y + + A
Sbjct: 138 PDRVTVTTVLNLPGCTVP------SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 191
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + K+ V++NA++ G +++ +AL+ F+ M R G THF++SS+ T A
Sbjct: 192 VFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAH 251
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L G VHA V++S L FV N+L+D Y+K ++D ++F+ + +RD VS+N ++
Sbjct: 252 LLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAA 311
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A + +R F +M + G + + +L+ + G+ A + G+ E
Sbjct: 312 YAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE 371
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ +D+ + G+LD A E +A W AL+
Sbjct: 372 DLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALI 410
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++ + +L Y+ + A LF + +N +W ++ HA AL F ML
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P + ++V T +H IK G FV NTL+D Y K G +
Sbjct: 133 GEGVIPDRVTVTTVLNLPGCT-----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +VF + +D V++N+M+ GC++ GL ++ F M R GI TF +LT +
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L G AL+ + + +D + LD + EMP
Sbjct: 248 GMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP 298
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 9/214 (4%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H++++ S +K+ + + +++ YAKCGCLDEA + FDEMP ++ ++W A+IS Y+
Sbjct: 458 RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHY 517
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD-WNVY 130
+ +NAI +F ML G P+ T SVL A D+ + H +Y W +
Sbjct: 518 GEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEH 577
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ ++D R + + K + + W +++ H+ + G + L +
Sbjct: 578 Y-ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL--HSCRIHGNQELARVAADKLF 634
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
G EPT + + + + + G+W A +K
Sbjct: 635 GMEPTDATPYVILSNIYA----RAGQWEDAACVK 664
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/551 (41%), Positives = 325/551 (58%), Gaps = 2/551 (0%)
Query: 17 HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
H+ K ++ N ++ K G L AR+LFD+MP +++ TW A+++G + E+
Sbjct: 98 HLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDED 157
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
++ F M R G+ P++F L SV + AG D GRQVHA+ ++ G D ++ VG+SL
Sbjct: 158 SLQFFLAMRREGMHPDEFGLGSVFRCC-AGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLA 216
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
MY R + + + AL S VS+N IAG + + E AL FS M P
Sbjct: 217 HMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVV 276
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
++ S + + +L QG+ VHA VIK+G V V +LV MY++ G + D+E+V++
Sbjct: 277 TFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGY 336
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D+ ++M++ C HG G V F++M+ G PN+VTFL +L ACSH+GL DEG
Sbjct: 337 CGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGL 396
Query: 317 GYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+F LM K +G +P HY VDLLGR+G LD A I MP+ +W LL AC+
Sbjct: 397 EFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKT 456
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
KN ++ AER+ E DP DS P++LL+NI A++ R D RK+M+E ++KEP S
Sbjct: 457 QKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVS 516
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
WVE K VH F D +HP++ I + +E+ KI+Q GY PD + V + +E+E L
Sbjct: 517 WVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSL 576
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AFA ++ P G I + KN+RVC DCH A K S+V REI+VRD +RFHHF
Sbjct: 577 THHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHF 636
Query: 556 RDGFCSCGDYW 566
RDG CSCGDYW
Sbjct: 637 RDGRCSCGDYW 647
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 138/272 (50%), Gaps = 3/272 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VHA+++ S +D+ + N++ + Y +CGCL E + +P +V++
Sbjct: 184 CAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSF 243
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
I+G +QN E A+ FS M + + P+ T S + A + G+QVHA +
Sbjct: 244 NTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQ-GQQVHAQVI 302
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D V V +SL+ MY+R + D+ ++ + +A+I+ +G KA+
Sbjct: 303 KAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVE 362
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
F +M+ G EP ++ ++ A + +G ++G + K+ G Q N +VD+
Sbjct: 363 LFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLL 422
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+SG +++AE + + ++ D V W ++L+ C
Sbjct: 423 GRSGCLDEAEALILSMPVRADGVIWKTLLSAC 454
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
RQ+HAF G + + ++LL YA + A LF + +N +SWN LI G +
Sbjct: 62 RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKN 121
Query: 174 SE-------------------------------GEKALRTFSEMLREGFEPTHFSYSSVF 202
+ E +L+ F M REG P F SVF
Sbjct: 122 GDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVF 181
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
A + G+ VHA+V++SG VGN+L MY + G + + E V L +V
Sbjct: 182 RCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIV 241
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
S+N+ + G Q+G + + +F M +AP+ VTF+ ++ CS L +GQ A +
Sbjct: 242 SFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQV 301
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLL 347
K GV+ + V + R G L
Sbjct: 302 IKAGVDKVVPVITSLVHMYSRCGCL 326
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+S +F A + L Q +HA SG F N L+ YA G + A +F +
Sbjct: 48 FSHIFRACRAIPLLRQ---LHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGIS 104
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
KR+V+SWN ++ GC ++G + F+KM +A T+ ++ ++ GL ++
Sbjct: 105 KRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVA----TWNAMVAGLTNVGLDEDSLQ 160
Query: 318 YFALMKKHGVEPEE 331
+F M++ G+ P+E
Sbjct: 161 FFLAMRREGMHPDE 174
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 353/566 (62%), Gaps = 6/566 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++H H+L +D+ + N ++N Y+K G L +A+ +FD+M V+D+V+W
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSW 291
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QN+ P A+ F M G++P+ T+ S L + + +D + R + F +
Sbjct: 292 NSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS-LTSIFSQLSDQRISRSILGFVI 350
Query: 122 KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + D +V +G++L++MYA+ M+ A +F L K+ +SWN L+ G+ + +A+
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 181 RTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
++ M+ E + P ++ S+ A + G+L+QG +HA +IK+ L FV L+D
Sbjct: 411 DAYN-MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLID 469
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G +EDA +F + + V WN+++ HG G+ ++ F+ ML + + +T
Sbjct: 470 LYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHIT 529
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ +L+ACSH+GL+DEGQ F +M+K +G++P HY VDLLGRAG L++A + +R M
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM 589
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI+P A++WGALL AC+++ N ELG A++R+ E+D + G ++LL+NIYA+ +
Sbjct: 590 PIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVI 649
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
+ R + ++ G++K P S V + +F + HP+ I+K+ + +S K+K +GYVP
Sbjct: 650 KVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVP 709
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D S V ++ E+E L HSE+LA+AF +ISTPP S I I KN+RVCGDCH+A K+ S
Sbjct: 710 DYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYIS 769
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCG 563
++ EREI+VRD+NRFHHF+DG CSC
Sbjct: 770 RISEREIVVRDSNRFHHFKDGICSCA 795
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 163/311 (52%), Gaps = 11/311 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ K+ +HA +L +I + ++N Y G + +R FD + K++ +W
Sbjct: 32 CVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSW 88
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG----LKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++IS Y + + A+ +Q+ + L+P+ +T +LKA D G++VH
Sbjct: 89 NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC-VSLVD---GKKVH 144
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
K G++ +V+V +SL+ +Y+R+ +D A +F + K+ SWNA+I+G +
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL + M EG + + +S+ A + + G +H HV+K G FV N L+
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+MY+K G ++DA+ VF+++ RD+VSWNS++ Q+ +R+F+ M GI P+ +
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLL 324
Query: 298 TFLCVLTACSH 308
T + + + S
Sbjct: 325 TVVSLTSIFSQ 335
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 8/263 (3%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++HA L +G N+ + + L+++Y + + F + KN SWN++I+ + R
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 174 SEGEKALRTFSEMLREG----FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+ +A+ +++ P +++ + A S L GK VH V K G +
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDD 155
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV +LV +Y++ G ++ A KVF + +DV SWN+M++G Q+G + +M
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ + +T +L C+ + + G + KHG++ + +++ + G L
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275
Query: 350 ALKFIREMPIEPTAAVWGALLGA 372
A +M + + W +++ A
Sbjct: 276 AQMVFDQMEVRDLVS-WNSIIAA 297
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 202 FTAL-ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
F AL S ++ K +HA ++ G + L+++Y G I + F+ + K++
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84
Query: 261 VVSWNSMLTGCAQHGL---GKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQ 316
+ SWNS+++ + G V M G + P+ TF +L AC L +G+
Sbjct: 85 IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGK 141
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACR 374
+ K G E + + V L R G+LD A K +MP++ + W A++ G C+
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS-WNAMISGFCQ 199
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/562 (40%), Positives = 343/562 (61%), Gaps = 1/562 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++ + L E++IVHA I+ + F + + + N ++ Y K G + EA+K+ MP D VTW
Sbjct: 509 CSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTW 568
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G+++N++P A+ + + G+ N T+ SVL A A K G +HA +
Sbjct: 569 NALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIV 628
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ + YV +SL+ MYA+ ++ + ++F L +K+ ++WNA++A +A GE+AL+
Sbjct: 629 LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALK 688
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G FS+S A A+ LE+G+ +H VIK G + V N +DMY
Sbjct: 689 IFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 748
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + D K+ + + R +SWN +++ A+HG + F +ML+ G P+ VTF+
Sbjct: 749 KCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVS 808
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+AC+H GL+DEG Y+ ++ ++ GV P H V +DLLGR+G L A FI+EMP+
Sbjct: 809 LLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVP 868
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P W +LL ACR+H N+EL AE + ELDP D ++L +N+ A++G+ D R
Sbjct: 869 PNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLR 928
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M + +KK+PACSWV+ K+ VH F + HPQ + I K E+ + K+ GYVPD+S
Sbjct: 929 KEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTS 988
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D++++E L HSE+LALAF LI+TP ST+ I KN+RVCGDCHS +KF S +V
Sbjct: 989 FALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIV 1048
Query: 541 EREIIVRDTNRFHHFRDGFCSC 562
R+I++RD RFHHF G CSC
Sbjct: 1049 GRKIVLRDPYRFHHFSGGKCSC 1070
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 192/359 (53%), Gaps = 2/359 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH ++ + D+ + +++ Y G + A+KLF+EMP ++V+WT+L+ GYS +
Sbjct: 218 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 277
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P + ++ +M + G+ NQ T ++V + G D G QV ++YG++ +V V +
Sbjct: 278 PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL-LEDQVLGYQVLGHIIQYGFEDSVSVAN 336
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ M++ F +++A ++F + + +SWNA+I+ +A ++LR F M E
Sbjct: 337 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 396
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ + +S +L+ G+ +H V+K G + NTL+ +Y+++G EDAE VF
Sbjct: 397 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 456
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +RD++SWNSM+ Q G ++ ++L+ G N VTF L ACS+ L
Sbjct: 457 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 516
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + AL+ G V + G+ G++ A K ++ MP +P W AL+G
Sbjct: 517 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 574
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 213/427 (49%), Gaps = 9/427 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
LK R +H ++ +++ + NT+L Y++ G ++A +F M +D+++W ++++
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Y Q+ + + + + +++L++G N T +S L A + + VHA + G+
Sbjct: 473 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-SKIVHALIIVAGFH 531
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ VG++L+ MY + M +A + + + V+WNALI GHA E +A++ + +
Sbjct: 532 DFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLI 591
Query: 187 LREGFEPTHFSYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+G + + SV A ++ L+ G +HAH++ +G + +V N+L+ MYAK G
Sbjct: 592 REKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGD 651
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ + +F+ L + ++WN+M+ A HG G+ ++ F +M G+ +Q +F L A
Sbjct: 652 LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAA 711
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
++ +L+EGQ L+ K G E + +D+ G+ G + LK + + PI +
Sbjct: 712 TANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLS 770
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA--GRLNDAARA--RK 421
W L+ A H + + +L P H+ ++ ++ G L D A
Sbjct: 771 WNILISAFARHGCFQKARETFHEMLKLGPKPD--HVTFVSLLSACNHGGLVDEGLAYYDS 828
Query: 422 MMKESGV 428
M +E GV
Sbjct: 829 MTREFGV 835
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 192/367 (52%), Gaps = 10/367 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ +HA + + I NT++N Y+K G ++ AR +FDEM ++ +W+ ++SGY +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
E A+ LF QM LG++PN F ++S++ A S +G D+ G QVH F +K G +V
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDV 231
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
YVG++L+ Y + +A LF + N VSW +L+ G++ + L + M +E
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 291
Query: 190 GFEPTHFSYSSVFTALASTGSLEQ---GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G ++++V +S G LE G V H+I+ G + V N+L+ M++ S+
Sbjct: 292 GVSGNQNTFATV---TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSV 348
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E+A VF+ + + D++SWN+M++ A HGL + ++R F M N T +L+ C
Sbjct: 349 EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 408
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
S L G+G L+ K G++ T + L AG + A + + + E W
Sbjct: 409 SSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA-ELVFQAMTERDLISW 467
Query: 367 GALLGAC 373
+++ AC
Sbjct: 468 NSMM-AC 473
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 189/364 (51%), Gaps = 3/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V HI+ F++ +++ N++++ ++ ++EA +FD M D+++W A+IS Y+ +
Sbjct: 319 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 378
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++ F M L + N T S L + + + K+GR +H +K G D NV + +
Sbjct: 379 CRESLRCFHWMRHLHNETNS-TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 437
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LL +Y+ + +DA +F A+ ++ +SWN+++A + + + L+ +E+L+ G
Sbjct: 438 TLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM 497
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
H +++S A ++ L + K VHA +I +G VGN LV MY K G + +A+KV
Sbjct: 498 NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL 557
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA-GLL 312
+ + D V+WN+++ G A++ V+ ++ + GI N +T + VL ACS LL
Sbjct: 558 QTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLL 617
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G A + G E ++ + + + + G L+ + +I + + W A++ A
Sbjct: 618 KHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSS-NYIFDGLGNKSPITWNAMVAA 676
Query: 373 CRMH 376
H
Sbjct: 677 NAHH 680
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
T G+ +HAFC+ + ++ ++L++MY++F ++ A ++F + +NE SW+ ++
Sbjct: 108 TSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTML 167
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL-EQGKWVHAHVIKSGG 226
+G+ R E+A+ F +M G EP F +S+ TA + +G + ++G VH V+K+G
Sbjct: 168 SGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGI 227
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+VG LV Y G + +A+K+F + +VVSW S++ G + G + +++
Sbjct: 228 LGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQR 287
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLL-DEGQGYFAL--MKKHGVEPEEAHYVTFVDLLGR 343
M + G++ NQ TF V ++C GLL D+ GY L + ++G E + + + +
Sbjct: 288 MRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS 344
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++ A M E W A++ A H
Sbjct: 345 FSSVEEACYVFDHMN-ECDIISWNAMISAYAHH 376
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 350/565 (61%), Gaps = 3/565 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L ++ + VH ++ F ++ + N +L+ Y+K + EA KLF EMP D +++
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
L++ Y+ N + + ++ LF ++ G F +++L + D GRQ+H+ +
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLD-IGRQIHSQTIVT 429
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ VG+SL+DMYA+ + +A +F+ L ++ V W A+I+ + +K E L+ F
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
EM R +Y+S+ A AS SL GK +H+H+I SG F G+ LVDMYAK
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC 549
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GSI+DA ++F + R+ VSWN++++ AQ+G G T+R FE+M+R+G+ P+ V+ L +L
Sbjct: 550 GSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL 609
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH GL++EG YF M + + + P++ HY + +D+L R G D A K + +MP EP
Sbjct: 610 CACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPD 669
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARK 421
+W ++L +C +HKN EL AA ++F + D+ P++ ++NIYA+AG ++ + +K
Sbjct: 670 EIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKK 729
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
M+E GVKK PA SWVE K+ H+F AND HPQ I KK E+ EK+ + GY PDSS
Sbjct: 730 AMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSC 789
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
L D++ + L+ HSE++A+AFALISTP GS I + KN+R C DCH+A K SK+V
Sbjct: 790 ALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVR 849
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI VRD++RFHHFRDGFC+C DYW
Sbjct: 850 REITVRDSSRFHHFRDGFCTCRDYW 874
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 206/370 (55%), Gaps = 2/370 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + E R VH+H++ + + + + N++L++Y K L A +LF+++P +D VT+
Sbjct: 209 TEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFN 268
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
AL++GYS+ AI LF +M +G +P +FT +++L A G D +FG+QVH F +K
Sbjct: 269 ALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA-GIQLDDIEFGQQVHGFVVK 327
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ WNV+V ++LLD Y++ D++ +A LF + + +S+N L+ +A +++L
Sbjct: 328 CNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLEL 387
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F E+ GF+ +F ++++ + A + +L+ G+ +H+ I + VGN+LVDMYAK
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAK 447
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +A ++F+ L + V W +M++ Q GL + ++ F +M R I + T+ +
Sbjct: 448 CGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ AC+ L G+ + + G VD+ + G + AL+ +EMP+ +
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567
Query: 363 AAVWGALLGA 372
+ W AL+ A
Sbjct: 568 VS-WNALISA 576
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 183/347 (52%), Gaps = 2/347 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I NT++ Y K G L EAR LFD M + VTWT LI GY+QN+Q A LF +M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R G+ P+ +L+++L + ++ RQVH+ +K GYD + V +SLLD Y + +
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEV-RQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A+ LF + ++ V++NAL+ G++++ +A+ F +M G+ PT F+++++ TA
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+E G+ VH V+K FV N L+D Y+K + +A K+F + + D +S+N
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
++T A +G K ++ F+++ G F +L+ + + LD G+ +
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + VD+ + G A + ++ I+ ++ W A++ +
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQ-SSVPWTAMISS 475
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 82 SQMLRLGLKPN----QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ +++ G PN F + S L+ F H N++ ++++
Sbjct: 90 ASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHK---------NIFSTNTMIM 140
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
Y + + +A LF ++ + V+W LI G+A+ ++ +A F EM R G +P H S
Sbjct: 141 GYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVS 200
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+++ + S+ + + VH+HVIK G V N+L+D Y K+ S+ A ++FN +
Sbjct: 201 LATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP 260
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+RD V++N++LTG ++ G + + F KM G P + TF +LTA ++ GQ
Sbjct: 261 ERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQ 320
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ K +D + + A K EMP
Sbjct: 321 VHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMP 361
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 15/174 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + +H+HI+GS + +++ + +++ YAKCG + +A ++F EMPV++ V+W
Sbjct: 511 CASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSW 570
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATD------DKFGR 114
ALIS Y+QN + + LF +M+R GL+P+ +L S+L A S G + D R
Sbjct: 571 NALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTR 630
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
K Y +S +DM R + D+A L + +E+ W++++
Sbjct: 631 IYKLVPKKEHY-------ASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVL 677
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/566 (40%), Positives = 346/566 (61%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + H + D N ++N Y KCG D AR +FD M V+ +V+W
Sbjct: 67 CAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSW 126
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+ + + A+ LFS+M R G ++FTLSS + A A ++ +Q+H L
Sbjct: 127 NTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINE-CKQLHTIAL 185
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D N +VG+++LD+YA+ + + DA ++F + + V+W++L AG+ + E+AL
Sbjct: 186 KLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALH 245
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F REG E T F+ S++ +A AS +G +HA ++K G FV +LVD+YA
Sbjct: 246 LFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYA 305
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G IE A +F + ++VV WN+M+ ++H + FEKM + GI PN+VT+L
Sbjct: 306 RCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLS 365
Query: 302 VLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ CSHAGL+++G+ YF+ LM VEP HY VD+LGR+G D A + + +MP E
Sbjct: 366 VLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFE 425
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA++WG+LLG+CR + N+ L AAE++F+L+P + G H+LL+N+YA++G + AR
Sbjct: 426 PTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMAR 485
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K +K+SG KKE SW+E K VH+FV + HP+ I+ K EI ++++
Sbjct: 486 KYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIE 545
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +++E L+ HSEKLAL+F LIS P I I KN+R+CGDCHS K A+ +
Sbjct: 546 CDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHIT 605
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
ER +IVRDTNRFHHF+DG CSCGD+W
Sbjct: 606 ERLVIVRDTNRFHHFKDGSCSCGDFW 631
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/599 (37%), Positives = 360/599 (60%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C K +E + +H H+L ++ D+ + ++++ YA+ G L++A K
Sbjct: 76 CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+FDE+PVKD+V+W A+ISGY++ + A+ LF +M++ ++
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ +VL A A + + GRQVH++ +G+ N+ + ++L+D+Y++ Q++ A
Sbjct: 196 PDEGTMVTVLSAC-AQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L K+ VSWN LI G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 255 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314
Query: 211 LEQGKWVHAHVIKSGGQLV--AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
++ G+W+H ++ K + + +L+DMYAK G IE A +VFN +L + + SWN+M+
Sbjct: 315 IDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGV 327
G A HG A F +M +NGI P+ +TF+ +L+ACSH+G LD G+ F ++ + + +
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDI 434
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG +GL A + I+ MP+EP +W +LL ACR H N+EL A
Sbjct: 435 TPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFAR 494
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+ +++P + G ++LL+NIYA+AG ++ A+ R ++ G+KK P CS +E + VH F+
Sbjct: 495 NLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFI 554
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA+AF
Sbjct: 555 VGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 614
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC D+W
Sbjct: 615 LISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 194/386 (50%), Gaps = 37/386 (9%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
A +F + + + W ++ GY+ + P +A+ L+ M+ LGL PN +T +LK+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF-----------TA 154
++ G+Q+H LK GY+ ++YV +SL+ MYA+ +++DA +F TA
Sbjct: 79 SKAFEE-GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 155 LES--------------------KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
L + K+ VSWNA+I+G+A ++AL F EM++ P
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN 254
+ +V +A A + S+E G+ VH+ + G + N L+D+Y+K G +E A +F
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
L +DVVSWN+++ G L K + F++MLR+G +PN VT + +L AC+H G +D
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 315 GQGYFALMKK--HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G+ + K V + + +D+ + G ++ A + M + + + W A++
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFG 376
Query: 373 CRMH--KNVELGAYAAERIFELDPHD 396
MH N ++ R ++P D
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDD 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 127/262 (48%), Gaps = 32/262 (12%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
FD A +F ++ N++ WN ++ G+A S+ AL+ + M+ G P +++ +
Sbjct: 13 FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR------ 255
+ A + + E+G+ +H HV+K G + +V +L+ MYA++G +EDA KVF+R
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 256 -------------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ +DVVSWN+M++G A+ G K + F++M++
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ P++ T + VL+AC+ + ++ G+ + + HG +DL + G ++ A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
+ + + W L+G
Sbjct: 253 CGLFEGLSCKDVVS-WNTLIGG 273
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A VF + + + + WN+ML G A + ++ + M+ G+ PN TF +L +C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
+ +EGQ + K G EP+ + + + + + G L+ A K + + + A
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHK-VFDRSSHRDVVSYTA 137
Query: 369 LLGACRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESG 427
L+ N+ +A+ +F+ P D + + YA G +A K M ++
Sbjct: 138 LITGYASSGNIR----SAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193
Query: 428 VKKE 431
V+ +
Sbjct: 194 VRPD 197
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 354/561 (63%), Gaps = 4/561 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + + +H +L F+ D+ + ++++ Y++ G + +ARKLFD+MP +D +W A+ISG
Sbjct: 10 LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISG 69
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN A+ + +M G+K + T++SVL A D G+ +H + +K+G ++
Sbjct: 70 YCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVC-AQVGDILSGKLIHLYVIKHGLEF 128
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++V ++L++MYA+F + A +F L K+ VSWN LI G+A+ +A+ + M
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 188 R-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
E P ++ S+ A + G+L+QG +H VIK+ FVG L+DMY K G +
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+DA +F ++ +++ V WN+M++ HG G+ + F +M + P+ +TF+ +L+AC
Sbjct: 248 DDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSAC 307
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+ + Q F +M++ +G++P HY VDL GRAG L+ A FI++MPI+P A+
Sbjct: 308 SHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASA 367
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALL ACR+H N+ELG +A+ER+FE+D + G ++LL+NIYA+ G+ R + ++
Sbjct: 368 WGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARD 427
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G++K P S + N V +F + HP+ I+++ R+++ KIK IGYVPD VL
Sbjct: 428 RGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQD 487
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++ E+E L HSE+LA+A+ +IST P + I I KN+RVCGDCH+ KF S + EREII
Sbjct: 488 VEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREII 547
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD++RFHHF+ G CSCGDYW
Sbjct: 548 VRDSSRFHHFKGGTCSCGDYW 568
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 158/292 (54%), Gaps = 11/292 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + +++H +++ + ++ + N ++N YAK G L A+K+F + +KD+V+W
Sbjct: 105 CAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
LI+GY+QN AI ++ M + PNQ T S+L A S GA G ++H
Sbjct: 164 NTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQ--GMRIHGQ 221
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K +V+VG+ L+DMY + ++DDA LF + KN V WNA+I+ + +GEKA
Sbjct: 222 VIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKA 281
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVD 238
L F EM E +P H ++ S+ +A + +G + +W + + G + +VD
Sbjct: 282 LELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVD 341
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGK-ATVRWFE 285
++ ++G +E A ++ ++ D +W ++L C HG LGK A+ R FE
Sbjct: 342 LFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFE 393
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%)
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ + G L GK +H V+K G + FV +LV MY++ G + DA K+F+ + RD S
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGS 62
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+M++G Q+G + ++M G+ + +T VL C+ G + G+ +
Sbjct: 63 WNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVI 122
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
KHG+E E +++ + G L A K
Sbjct: 123 KHGLEFELFVSNALINMYAKFGSLGHAQK 151
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/596 (38%), Positives = 351/596 (58%), Gaps = 33/596 (5%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ +K L E +H F +D +Q ++ YA CG + EAR +FD+M +D+VTW+
Sbjct: 133 SRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWS 192
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+I GY Q+ +A++LF +M ++P++ LS+VL A G A + +G+ +H F ++
Sbjct: 193 IMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGR-AGNLSYGKMIHDFIME 251
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-------------------- 162
+ ++ S+L+ MYA MD A LF + KN V+
Sbjct: 252 NNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSV 311
Query: 163 -----------WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
W+A+I+G+A ++AL F+EM G +P + SV TA A G+L
Sbjct: 312 FNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL 371
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+Q KW+H V K+G + N L++MYAK GS+E A ++F+++ +++V+SW M++
Sbjct: 372 DQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAF 431
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG-YFALMKKHGVEPE 330
A HG + +R+F +M I PN +TF+ VL ACSHAGL++EG+ +++++ +H + P+
Sbjct: 432 AMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPK 491
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY VDL GRA LL AL+ + MP+ P +WG+L+ ACR+H +ELG +AA+R+
Sbjct: 492 HVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLL 551
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
ELDP G H+ L+NIYA A R D + RK+MK G+ KE CS E N +H F+ D
Sbjct: 552 ELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVAD 611
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
+H I++K E+ K+K +GY P++ +L +++E++ + HSEKLAL + L+
Sbjct: 612 RSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMR 671
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
GS I I KN+RVC DCH+ K ASKV EREI+VRD RFHH++DG CSC DYW
Sbjct: 672 DGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 193/406 (47%), Gaps = 40/406 (9%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQ-NTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
THLK+ VHA IL S ++ ++++ A LD A +F+ +P +
Sbjct: 37 THLKQ------VHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLC 90
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ S++++PE ++++ +M GL ++F+ +LKA + + G ++H
Sbjct: 91 NRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE-GLEIHGLAA 149
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D + +V + L+ MYA ++ +A +F + ++ V+W+ +I G+ + AL
Sbjct: 150 KLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALL 209
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM EP S+V +A G+L GK +H ++++ + + + LV MYA
Sbjct: 210 LFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA 269
Query: 242 KSGS-------------------------------IEDAEKVFNRLLKRDVVSWNSMLTG 270
GS IE+A VFN+++K+D+V W++M++G
Sbjct: 270 SCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISG 329
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A+ + + F +M GI P+QVT L V+TAC+H G LD+ + + K+G
Sbjct: 330 YAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGA 389
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+++ + G L+RA + +MP W ++ A MH
Sbjct: 390 LPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMH 434
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 36/308 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD----------------- 44
C L +++H I+ + D +Q+ ++ YA CG +D
Sbjct: 233 CGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVAS 292
Query: 45 --------------EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
AR +F++M KD+V W+A+ISGY+++D P+ A+ LF++M LG+K
Sbjct: 293 TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352
Query: 91 PNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+Q T+ SV+ A GA D + +H F K G+ + + ++L++MYA+ ++ A
Sbjct: 353 PDQVTMLSVITACAHLGALDQ--AKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERAR 410
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + KN +SW +I+ A + ALR F +M E EP ++ V A + G
Sbjct: 411 RIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAG 470
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+E+G+ + +I V +VD++ ++ + +A ++ + L +V+ W S+
Sbjct: 471 LVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSL 530
Query: 268 LTGCAQHG 275
+ C HG
Sbjct: 531 MAACRVHG 538
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 19/203 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L +A+ +H + + F + + N ++ YAKCG L+ AR++FD+MP K++++W
Sbjct: 365 CAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISW 424
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV---- 116
T +IS ++ + +A+ F QM ++PN T VL A S AG ++ GR++
Sbjct: 425 TCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEE--GRKIFYSM 482
Query: 117 ---HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHAR 172
H K+ V+ G ++D++ R + + +A L A+ + N + W +L+A A
Sbjct: 483 INEHNITPKH-----VHYG-CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMA--AC 534
Query: 173 KSEGEKALRTFSEMLREGFEPTH 195
+ GE L F+ +P H
Sbjct: 535 RVHGEIELGEFAAKRLLELDPDH 557
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
S+ ++F+AL+S SL K VHA +++S + + + ++ A S S++ A VFN
Sbjct: 22 SHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNL 81
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ K + N L ++ + T+ +E+M G+A ++ +F +L A S L EG
Sbjct: 82 IPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEG 141
Query: 316 QGYFALMKKHGVEPE------------------EAHYV-------------TFVDLLGRA 344
L K G + + EA + +D ++
Sbjct: 142 LEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQS 201
Query: 345 GLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAERIFE----LDPHDS 397
GL + AL EM +EP + +L AC N+ G + I E +DPH
Sbjct: 202 GLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ 261
Query: 398 GPHILLANIYASAGRLNDA 416
L +YAS G ++ A
Sbjct: 262 SA---LVTMYASCGSMDLA 277
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/580 (39%), Positives = 351/580 (60%), Gaps = 39/580 (6%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D TI+ Y + L AR+L + M V W A+ISGY E A L +
Sbjct: 205 RRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRR 264
Query: 84 MLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYD----WNVYVGSSLLDM 138
M LG++ +++T +SV+ A S AG + GRQVHA+ L+ + + V ++L+ +
Sbjct: 265 MHSLGIQLDEYTYTSVISAASNAGLFN--IGRQVHAYVLRTVVQPSGHFVLSVNNALITL 322
Query: 139 YARFDQMDDAWFLFTALESKNEVSWNALIAG--HARKSE--------------------- 175
Y R ++ +A +F + K+ VSWNA+++G +AR+ E
Sbjct: 323 YTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMI 382
Query: 176 --------GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
GE+ L+ F++M EG EP ++Y+ + + GSL+ G+ +H+ +I+ G
Sbjct: 383 SGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHD 442
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
VGN L+ MY++ G +E A+ VF + D VSWN+M+ AQHG G ++ +EKM
Sbjct: 443 SSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKM 502
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGL 346
L+ I P+++TFL +L+ACSHAGL+ EG+ YF M+ +G+ PEE HY +DLL RAG+
Sbjct: 503 LKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGM 562
Query: 347 LDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANI 406
A MP EP A +W ALL C +H N+ELG AA+R+ EL P G +I L+N+
Sbjct: 563 FSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNM 622
Query: 407 YASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREI 466
YA+ G+ ++ AR RK+M+E GVKKEP CSW+E +N VH+F+ +D HP+ +++ ++
Sbjct: 623 YAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQL 682
Query: 467 SEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVC 526
+++++GYVPD+ VL + +++E L HSEKLA+ + ++ P G+TI + KN+R+C
Sbjct: 683 VHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRIC 742
Query: 527 GDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
GDCH+AFK+ SKVV+REIIVRD RFHHFR+G CSC +YW
Sbjct: 743 GDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 203/476 (42%), Gaps = 111/476 (23%)
Query: 11 ARIVHAHILGSAFKN-------------------------------DIAMQNTILNAYAK 39
AR VHAHIL S FK DI T+L+AY+
Sbjct: 15 ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 40 CGCLDEARKLFDEMP--VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
G + A +LF+ P ++D V++ A+I+ +S + A+ LF QM RLG P+ FT S
Sbjct: 75 AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134
Query: 98 SVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR---------------- 141
SVL A A ++ +Q+H K+G V ++L+ Y
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAA 194
Query: 142 ---FDQM------DDAWFLFTALESKNE-----------------VSWNALIAGHARKSE 175
FD+ + AW A +N+ V+WNA+I+G+ +
Sbjct: 195 RKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGF 254
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GGQLVAF 231
E+A M G + ++Y+SV +A ++ G G+ VHA+V+++ G V
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLS 314
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC-------------------- 271
V N L+ +Y + G + +A +VF+++ +D+VSWN++L+GC
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRS 374
Query: 272 -----------AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
AQ+G G+ ++ F +M G+ P + + +CS G LD GQ +
Sbjct: 375 LLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHS 434
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + G + + + + R GL++ A MP + + W A++ A H
Sbjct: 435 QIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVS-WNAMIAALAQH 489
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L + +H+ I+ + +++ N ++ Y++CG ++ A +F MP D V+W
Sbjct: 420 CSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSW 479
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
A+I+ +Q+ AI L+ +ML+ + P++ T ++L A S AG K GR
Sbjct: 480 NAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLV--KEGRHYFDTM 537
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSE 175
+ YG S L+D+ R +A + ++ + W AL+AG H
Sbjct: 538 RVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMEL 597
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
G +A E++ + + T+ S S+++ AL
Sbjct: 598 GIQAADRLLELMPQQ-DGTYISLSNMYAAL 626
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 23/246 (9%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
LA + VHAH++ SG + + N L+D Y KS +I A +F+++ K D+V+
Sbjct: 6 LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ML+ + G K + F + + V++ ++TA SH+ F MK+
Sbjct: 66 TTMLSAYSAAGNIKLAHQLFNATPMS--IRDTVSYNAMITAFSHSHDGHAALQLFVQMKR 123
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL--------LGACRMH 376
G P+ TF +LG L+ +++ E WGAL L +C +
Sbjct: 124 LGFVPDP---FTFSSVLGALSLIADEETHCQQLHCE--VFKWGALSVPSVLNALMSCYVS 178
Query: 377 ------KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
N + AA ++F+ P I A R +D AR++++ G+
Sbjct: 179 CASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLE--GMTD 236
Query: 431 EPACSW 436
A +W
Sbjct: 237 HIAVAW 242
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/541 (41%), Positives = 339/541 (62%), Gaps = 2/541 (0%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ M NT++ +C +++A+ LF M +D +TWT +++G +QN A+ +F +M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G+ +Q+T S+L A GA A ++ G+Q+HA+ + Y+ NV+VGS+L+DMY++ +
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEE-GKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIR 330
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F + +N +SW A+I G+ + + E+A+R FSEM +G +P F+ SV ++ A
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ SLE+G H + SG V N LV +Y K GSIEDA ++F+ + D VSW +
Sbjct: 391 NLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 450
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-H 325
++TG AQ G K T+ FEKML NG+ P+ VTF+ VL+ACS AGL+++G YF M+K H
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+ P + HY +DL R+G A +FI++MP P A W LL +CR+ N+E+G +A
Sbjct: 511 DIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
AE + E DP + ++LL +++A+ G+ + A R+ M++ VKKEP CSW++ KN VH+
Sbjct: 571 AENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHI 630
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F A+D +HP + I++K ++ K+ + GY PD S VL ++ + HSEKLA+A
Sbjct: 631 FSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIA 690
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F LI P I I KN+RVC DCH+A KF SK+ R+I+VRD RFH F DG CSCGD+
Sbjct: 691 FGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDF 750
Query: 566 W 566
W
Sbjct: 751 W 751
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 231/491 (47%), Gaps = 65/491 (13%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-G 88
+N +L+A A + + +LF MP +D V++ ALI+G+S P ++ L+ +LR
Sbjct: 82 RNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREES 141
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
++P + TLS+++ + A +D G VH L+ G+ +VGS L+DMYA+ + DA
Sbjct: 142 VRPTRITLSAMIMVASA-LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDA 200
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGE------------------------------- 177
+F +E+K V +N LI G R E
Sbjct: 201 RRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQL 260
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M EG +++ S+ TA + + E+GK +HA++ ++ + FVG+ LV
Sbjct: 261 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALV 320
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY+K SI AE VF R+ R+++SW +M+ G Q+ + VR F +M +GI P+
Sbjct: 321 DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDF 380
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKF 353
T V+++C++ L+EG + L G+ Y+T V L G+ G ++ A +
Sbjct: 381 TLGSVISSCANLASLEEGAQFHCLALVSGL----MRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 354 IREMPIEPTAAVWGALL-GACRMHKNVE-LGAYAAERIFELDPHDSGPHILLANIYASAG 411
EM + W AL+ G + K E + + + L P D I G
Sbjct: 437 FDEMSFHDQVS-WTALVTGYAQFGKAKETIDLFEKMLVNGLKP-DGVTFI---------G 485
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK---KWREISE 468
L+ +RA + E C + ++ H V DD + ++ +++E E
Sbjct: 486 VLSACSRAGLV--------EKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEE 537
Query: 469 KIKQIGYVPDS 479
IKQ+ + PD+
Sbjct: 538 FIKQMPHSPDA 548
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 151/277 (54%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +E + +HA+I + +++++ + + +++ Y+KC + A +F M +++++W
Sbjct: 288 CGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISW 347
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I GY QN E A+ FS+M G+KP+ FTL SV+ + A+ ++ G Q H L
Sbjct: 348 TAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEE-GAQFHCLAL 406
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V ++L+ +Y + ++DA LF + ++VSW AL+ G+A+ + ++ +
Sbjct: 407 VSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETID 466
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F +ML G +P ++ V +A + G +E+G + ++ +V ++D+
Sbjct: 467 LFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG-CDYFDSMQKDHDIVPIDDHYTCMIDL 525
Query: 240 YAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQHG 275
Y++SG ++AE+ ++ D W ++L+ C G
Sbjct: 526 YSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D N++ ++LL A + D LF ++ ++ VS+NALI G + ++++ +
Sbjct: 76 DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135
Query: 186 MLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+LRE PT + S++ ++ G VH V++ G AFVG+ LVDMYAK G
Sbjct: 136 LLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMG 195
Query: 245 SIEDAEKVFNR-------------------------------LLKRDVVSWNSMLTGCAQ 273
I DA +VF ++ RD ++W +M+TG Q
Sbjct: 196 LIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ 255
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+GL + F +M G+ +Q TF +LTAC +EG+ A + + E
Sbjct: 256 NGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFV 315
Query: 334 YVTFVDLLGRAGLLDRALKFIREMP----IEPTAAVWGALLGAC 373
VD+ + + A R M I TA + G AC
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC 359
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 59/230 (25%)
Query: 198 YSSVFTALASTGS---LEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGS-------- 245
Y+++ ++ A G + VH ++K+ Q F+ N L+ YAKSG
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 246 -----------------------IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+ D E++F + +RD VS+N+++TG + G +V+
Sbjct: 72 DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131
Query: 283 WFEKMLR-NGIAPNQVTFLCVLTACS-----------HAGLLDEGQGYFALMKKHGVEPE 330
+ +LR + P ++T ++ S H +L G G +A +
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGS------ 185
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
VD+ + GL+ A + +EM + T ++ L+ K +E
Sbjct: 186 -----PLVDMYAKMGLIRDARRVFQEMEAK-TVVMYNTLITGLLRCKMIE 229
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/545 (40%), Positives = 349/545 (64%), Gaps = 3/545 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ N +++ YAK G L EA+ LFD+MP +D +WTA+ISGY ++D+P A+ LF
Sbjct: 133 ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRM 192
Query: 84 MLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
M R K N+FT+SS L A+ A + G+++H + ++ G D + V S+L DMY +
Sbjct: 193 MKRSDNSKSNKFTVSSALAAAAAVPCL-RIGKEIHGYIMRTGLDSDEVVWSALSDMYGKC 251
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+++A +F + ++ V+W A+I + + ++ F+++LR G P F++S V
Sbjct: 252 GSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVL 311
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
A A+ S E GK VH ++ + G +F + LV MY+K G++ AE+VF + D+
Sbjct: 312 NACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLF 371
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-AL 321
SW S++ G AQ+G +R+FE ++++G P+ +TF+ VL+AC+HAGL+D+G YF ++
Sbjct: 372 SWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSI 431
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+++G+ HY +DLL R+G D A I +M ++P +W +LLG CR+H N++L
Sbjct: 432 KEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKL 491
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
AAE +FE++P + ++ LANIYA+AG ++ A+ RK M + GV K+P SW+ K
Sbjct: 492 AQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKR 551
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
VH+F+ DD+HP+ I++ ++S+++K+ G+VPD++ VL + +++E L HSEK
Sbjct: 552 DVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEK 611
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+AF +ISTP G+ I + KN+R C DCH+A KF SK+ R+IIVRD+NRFH F DG CS
Sbjct: 612 LAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCS 671
Query: 562 CGDYW 566
C DYW
Sbjct: 672 CRDYW 676
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 177/323 (54%), Gaps = 6/323 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + +H +I+ + +D + + + + Y KCG ++EAR +FD+M +D+VTWTA+I
Sbjct: 219 LRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDR 278
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y Q+ + + LF+ +LR G++PN+FT S VL A A T ++ G++VH + + G+D
Sbjct: 279 YFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNAC-ANQTSEELGKKVHGYMTRVGFDP 337
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ S+L+ MY++ M A +F + SW +LIAG+A+ + ++A+R F ++
Sbjct: 338 FSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLV 397
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G +P H ++ V +A A G +++G + H+ + G A ++D+ A+SG
Sbjct: 398 KSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQF 457
Query: 247 EDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLT 304
++AE + +++ +K D W S+L GC HG K R E + I P N T++ +
Sbjct: 458 DEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE--IEPENPATYVTLAN 515
Query: 305 ACSHAGLLDEGQGYFALMKKHGV 327
+ AG+ E M GV
Sbjct: 516 IYATAGMWSEVAKIRKTMDDRGV 538
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + VH ++ F + +++ Y+KCG + A ++F E P D+ +W
Sbjct: 314 CANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSW 373
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GY+QN QP+ AI F +++ G +P+ T VL A DK H+
Sbjct: 374 TSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKE 433
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
+YG + ++D+ AR Q D+A + + + K ++ W +L+ G
Sbjct: 434 QYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 67/111 (60%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+ L+ ++L + +P+ YS++ + + L+QGK VH H+ SG F+ N L
Sbjct: 52 QNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRL 111
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
++MYAK S+ D++K+F+ + +RD+ SWN +++G A+ GL + F+KM
Sbjct: 112 LEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKM 162
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/563 (39%), Positives = 353/563 (62%), Gaps = 5/563 (0%)
Query: 8 LKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++ R+ AH + + D+ ++ YA G ++ A+KLFDE+PVKD+V+W A+IS
Sbjct: 180 VQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMIS 239
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY++ + A+ LF M++ ++P++ T+ +V+ A + + GRQVH + +G+
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE-LGRQVHLWIDDHGFG 298
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
N+ + ++L+D+Y++ +++ A LF L K+ +SWN LI G+ + ++AL F EM
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSG 244
LR G P + S+ A A G+++ G+W+H ++ K G + + +L+DMYAK G
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
IE A +VFN +L + + SWN+M+ G A HG A+ F +M + GI P+ +TF+ +L+
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+G+LD G+ F M + + + P+ HY +DLLG +GL A + I M +EP
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 538
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W +LL AC+MH NVELG AE + +++P + G ++LL+NIYASAGR N+ A+ R ++
Sbjct: 539 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+ G+KK P CS +E + VH F+ D HP+ I+ E+ +++ G+VPD+S VL
Sbjct: 599 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 658
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+++ +E L+ HSEKLA+AF LIST PG+ + I KN+RVC +CH A K SK+ +RE
Sbjct: 659 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 718
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
II RD RFHHFRDG CSC DYW
Sbjct: 719 IIARDRTRFHHFRDGVCSCNDYW 741
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 44/431 (10%)
Query: 6 KKLKEARIVHAHILGSAFKN-----DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
K L+ RI+HA ++ N ++ IL+ + + L A +F + +++
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEG--LPYAISVFKTIQEPNLLI 101
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W + G++ + P +A+ L+ M+ LGL PN +T VLK S A + K G+Q+H
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK-SCAKSKAFKEGQQIHGHV 160
Query: 121 LKYGYDWNVYVGSSLLDMYAR----------FDQ---------------------MDDAW 149
LK G D ++YV +SL+ MY + FD+ +++A
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF + K+ VSWNA+I+G+A ++AL F +M++ P + +V +A A +G
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
S+E G+ VH + G + N L+D+Y+K G +E A +F RL +DV+SWN+++
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 340
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GV 327
G L K + F++MLR+G PN VT L +L AC+H G +D G+ + K GV
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 400
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH--KNVELGAYA 385
+ + +D+ + G ++ A + + + + + W A++ MH + ++
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 386 AERIFELDPHD 396
R + P D
Sbjct: 460 RMRKIGIQPDD 470
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 170/337 (50%), Gaps = 18/337 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ R VH I F +++ + N +++ Y+KCG L+ A LF+ +P KD+++W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
LI GY+ + + A++LF +MLR G PN T+ S+L A GA D GR +H +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID--IGRWIHVYI 393
Query: 121 LKY--GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G + +SL+DMYA+ ++ A +F ++ K+ SWNA+I G A +
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN---- 234
+ FS M + G +P ++ + +A + +G L+ G+ H+ ++ Q
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR----HIFRTMTQDYKMTPKLEHY 509
Query: 235 -TLVDMYAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
++D+ SG ++AE++ N + D V W S+L C HG + + E +++ I
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK--I 567
Query: 293 AP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
P N +++ + + AG +E AL+ G++
Sbjct: 568 EPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 604
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 9/234 (3%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFNRLLK 258
+ L + +L+ + +HA +IK G + + L++ S E A VF + +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+++ WN+M G A + ++ + M+ G+ PN TF VL +C+ + EGQ
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
+ K G + + + + + + + G L+ A K + P + + AL+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS-YTALIKGYASRGY 215
Query: 379 VELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+E A+++F+ P D + + YA G +A K M ++ V+ +
Sbjct: 216 IE----NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 345/566 (60%), Gaps = 4/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+KLK IVHA ++ A +++ + NT++ Y K G +DEA+K+ MP +D+VTW
Sbjct: 563 CYNLEKLK---IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTW 619
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++ + P I F+ M R GL N T+ ++L + K G +HA +
Sbjct: 620 NALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIV 679
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ + YV SSL+ MYA+ ++ + ++F L +KN +WNA+ + +A GE+AL+
Sbjct: 680 VAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALK 739
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ M +G + FS+S + + L++G+ +H+ +IK G +L +V N +DMY
Sbjct: 740 FIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYG 799
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+D ++ R SWN +++ A+HG + F +ML G+ P+ VTF+
Sbjct: 800 KCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVS 859
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSH GL+DEG YF+ M + GV H V +DLLGR+G L A FI +MP+
Sbjct: 860 LLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVP 919
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VW +LL AC++H N+ELG AA+R+FEL+ D ++L +N+ AS R D R
Sbjct: 920 PNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVR 979
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M+ +KK+PACSW++ KN V F D HPQ A I+ K E+ + ++ G++PD+S
Sbjct: 980 KQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTS 1039
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L D++++E L HSE++ALAF LI++ GS + I KN+RVCGDCHS FK SK+V
Sbjct: 1040 YALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIV 1099
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+I+VRD+ RFHHF G CSC DYW
Sbjct: 1100 GRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 202/376 (53%), Gaps = 6/376 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + LK R +H I S ++++ + N++L+ YA+ G ++A +F MP +D+++W
Sbjct: 462 CGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISW 521
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ + ++ + +AI+L +ML+ N T ++ L A + + + VHAF +
Sbjct: 522 NSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSA----CYNLEKLKIVHAFVI 577
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N+ +G++L+ MY +F MD+A + + ++ V+WNALI GHA + ++
Sbjct: 578 HFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQ 637
Query: 182 TFSEMLREGFEPTHFSYSSVF-TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ M REG + + ++ T ++ L+ G +HAH++ +G +L +V ++L+ MY
Sbjct: 638 AFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMY 697
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ G + + +F+ L ++ +WN++ + A +G G+ +++ +M +G+ +Q +F
Sbjct: 698 AQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFS 757
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
L + +LDEGQ + + K G E +E +D+ G+ G +D + I +P
Sbjct: 758 VALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFR-ILPIPKI 816
Query: 361 PTAAVWGALLGACRMH 376
+ W L+ A H
Sbjct: 817 RSKRSWNILISALARH 832
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 190/363 (52%), Gaps = 6/363 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
AR +H +++ +++ + ++L+ Y G + EA KLF+E+ ++V+WT+L+ Y+
Sbjct: 268 ARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYAD 327
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-V 129
N + + ++ + GL T+++V++ G D G Q+ +K G D + V
Sbjct: 328 NGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFG-DKTMGYQILGDVIKSGLDTSSV 386
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
V +SL+ M+ +D +++A +F ++ ++ +SWN++I A E++L F M R
Sbjct: 387 SVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRT 446
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
+ + + S++ A S L+ G+ +H + KSG + V N+L+ MYA++GS EDA
Sbjct: 447 HPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDA 506
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
E VF+ + RD++SWNSM+ + G + +ML+ A N VTF L+AC +
Sbjct: 507 ELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN- 565
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L++ + A + V T V + G+ GL+D A K + MP E W AL
Sbjct: 566 --LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNAL 622
Query: 370 LGA 372
+G
Sbjct: 623 IGG 625
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 190/361 (52%), Gaps = 11/361 (3%)
Query: 18 ILGSAFKN-----DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
ILG K+ +++ N++++ + ++EA ++F+ M +D ++W ++I+ + N
Sbjct: 372 ILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNG 431
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ E ++ F M R K + T+S++L A G+ A K+GR +H K G + NV V
Sbjct: 432 RFEESLGHFFWMRRTHPKTDYITISALLPACGS-AQHLKWGRGLHGLITKSGLESNVCVC 490
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+SLL MYA+ +DA +F + +++ +SWN+++A H + A+ EML+
Sbjct: 491 NSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKT--- 547
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+Y + TAL++ +LE+ K VHA VI +GNTLV MY K G +++A+KV
Sbjct: 548 RKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKV 607
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGL 311
+ +RDVV+WN+++ G A AT++ F M R G+ N +T + +L C S L
Sbjct: 608 CKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYL 667
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L G A + G E + + + + + G L+ + +I ++ ++ W A+
Sbjct: 668 LKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTS-SYIFDVLANKNSSTWNAIFS 726
Query: 372 A 372
A
Sbjct: 727 A 727
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 181/376 (48%), Gaps = 7/376 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ +HA + + + NT++N Y+K G + A+ +FD+M ++ +W +ISG+ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
A+ F M G+ P+ + ++S++ A + RQ+H + +K G NV+
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
VG+SLL Y + +A LF +E N VSW +L+ +A ++ L + + G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSGSIEDA 249
T + ++V G G + VIKSG + V N+L+ M+ S+E+A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VFN + +RD +SWNS++T A +G + ++ F M R + +T +L AC A
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+G L+ K G+E + + + +AG + A MP + W ++
Sbjct: 466 QHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLIS-WNSM 524
Query: 370 LGACRMHKNVELGAYA 385
+ + +VE G Y+
Sbjct: 525 MAS-----HVEDGKYS 535
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 137/281 (48%), Gaps = 7/281 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
+S L+ + ++ G+ +HA C+K N + ++L++MY++F + A +F +
Sbjct: 149 VSRFLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKM 208
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG- 214
+N+ SWN +I+G R KA++ F M G P+ + +S+ TA +G + +G
Sbjct: 209 YDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGA 268
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ +H +V+K G FVG +L+ Y GS+ +A K+F + + ++VSW S++ A +
Sbjct: 269 RQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADN 328
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL--MKKHGVEPEEA 332
G K + + + NG+ T V+ C G D+ GY L + K G++
Sbjct: 329 GHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFG--DKTMGYQILGDVIKSGLDTSSV 386
Query: 333 HYV-TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + + G ++ A + M T + W +++ A
Sbjct: 387 SVANSLISMFGNYDSVEEASRVFNNMQERDTIS-WNSIITA 426
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 346/556 (62%), Gaps = 8/556 (1%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+ ++ D+ ++ YA G ARK+FDE+ +D+V+W A+I+GY +N + E A
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK----YGYDWNVYVGS 133
+ LF +M+R ++P++ TL SV+ A A + + GRQVH++ +G+ ++ + +
Sbjct: 181 LELFKEMMRTNVRPDEGTLVSVVSAC-AQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVN 239
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D+Y++ ++ A+ LF L K+ VSWN LI G+ + ++AL F EMLR G P
Sbjct: 240 ALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+ SV A A G+++ G+W+H ++ K G + +L+DMYAK G IE A +
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VFN +L R + SWN+M+ G A HG A F +M N + P+ +TF+ +L+ACSH+GL
Sbjct: 360 VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 312 LDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
LD G+ F ++ + + + P+ HY +DLLG +GL A + I MP+EP +W +LL
Sbjct: 420 LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
AC+ H N+EL A+++ +++P +SG ++LL+NIYA+AGR D AR R ++ G+KK
Sbjct: 480 KACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKK 539
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CS +E + VH F+ D HP+R I+ E+ ++++ G+ PD+S VL +++
Sbjct: 540 VPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEW 599
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E L+ HSEKLA+AF LIST PG+ + I KN+RVC +CH A K SK+ +REI+ RD
Sbjct: 600 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRT 659
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHFRDG CSC DYW
Sbjct: 660 RFHHFRDGVCSCCDYW 675
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 192/393 (48%), Gaps = 41/393 (10%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ + +++ W ++ G++ + P +A+ ++ +M+ LG PN ++ +LK+
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA-------- 154
++ GRQ+HA LK G + YV +SL+ MYAR ++DA +F A
Sbjct: 74 CAKSKAFEE-GRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132
Query: 155 -----------------------LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+ ++ VSWNA+I G+ E+AL F EM+R
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GGQLVAFVGNTLVDMYAKSGSIE 247
P + SV +A A +GS+E G+ VH+ V G + N L+D+Y+K G +E
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +F L +DVVSWN+++ G L K + F++MLR+G PN VT L VL AC+
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312
Query: 308 HAGLLDEGQGYFALMKK--HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
H G +D G+ + K GV E + + +D+ + G ++ A + M + + +
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM-LYRSLSS 371
Query: 366 WGALLGACRMH--KNVELGAYAAERIFELDPHD 396
W A++ MH N ++ R ++P D
Sbjct: 372 WNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDD 404
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
FD + A +F ++ N + WN ++ GHA S+ AL + M+ G P +S+ +
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED------------- 248
+ A + + E+G+ +HA V+K G L +V +L+ MYA++G +ED
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 249 ------------------AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
A KVF+ + +RDVVSWN+M+TG ++G + + F++M+R
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALM----KKHGVEPEEAHYVTFVDLLGRAGL 346
+ P++ T + V++AC+ +G ++ G+ + + HG +DL + G
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 347 LDRALKFIREMPIEPTAAVWGALLGA 372
++ A + + + W L+G
Sbjct: 251 VETAFGLFEGLSCKDVVS-WNTLIGG 275
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/620 (38%), Positives = 361/620 (58%), Gaps = 57/620 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L + + +H++ + + D + N +++ YAKCG +++A K+F+ M KD+V+W
Sbjct: 269 CASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSW 328
Query: 62 TALISGYSQ------------NDQPEN-----------------------AIILFSQMLR 86
A+++GY+Q N + EN A+ F QM+
Sbjct: 329 NAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMIL 388
Query: 87 LGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLK------------YGYDWNVYVGS 133
G +PN T+ S+L A + GA G ++HA+ LK G ++ V +
Sbjct: 389 DGSEPNSVTIISLLSACASLGALSQ--GMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYN 446
Query: 134 SLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+L+DMY++ A +F ++ +N V+W +I G+A+ + AL+ FSEM+ + +
Sbjct: 447 ALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPY 506
Query: 192 E--PTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIE 247
P ++ S + A A +L GK +HA+V + V FV N L+DMY+K G ++
Sbjct: 507 AVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVD 566
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A VF+ + KR+ VSW SM++G HG GK + F+KM + G P+ ++FL +L ACS
Sbjct: 567 TARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS 626
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+G++D+G YF +M++ + V HY +DLL R G LD+A K I+EMP+EP+A +W
Sbjct: 627 HSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIW 686
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
ALL ACR+H NVEL YA ++ + + G + L++NIYA+A R D AR R++MK+S
Sbjct: 687 VALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKS 746
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+KK P CSWV+ K F D +HP I+ + +IK +GYVP+++ L
Sbjct: 747 GIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDV 806
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D +E+ L HSEKLALA+ L++T PG I I KN+RVCGDCHSAF + SK+V+ EIIV
Sbjct: 807 DDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIV 866
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD++RFHHF++G CSCG YW
Sbjct: 867 RDSSRFHHFKNGSCSCGGYW 886
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 210/437 (48%), Gaps = 64/437 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C L R +H I + F++++ + N ++ Y++CG L++A +FDE+ + D+
Sbjct: 159 CGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDV 218
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRL------GLKPNQFTLSSVLKASGAGATDDKF 112
++W ++++ + + P A+ LFS+M + + + ++ ++L A + +
Sbjct: 219 ISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQI 278
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL------ 166
+++H++ ++ G + +V ++L+D YA+ M+DA +F +E K+ VSWNA+
Sbjct: 279 -KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQ 337
Query: 167 -----------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
IAG+A++ ++AL F +M+ +G EP +
Sbjct: 338 SGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVT 397
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIK------------SGGQLVAFVGNTLVDMYAKSGS 245
S+ +A AS G+L QG +HA+ +K G V N L+DMY+K S
Sbjct: 398 IISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRS 457
Query: 246 IEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLC 301
+ A +F+ + + R+VV+W M+ G AQ+G ++ F +M+ +APN T C
Sbjct: 458 FKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISC 517
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPI 359
+L AC+H L G+ A + +H ++V +D+ + G +D A MP
Sbjct: 518 ILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP- 576
Query: 360 EPTAAVWGALLGACRMH 376
+ W +++ MH
Sbjct: 577 KRNEVSWTSMMSGYGMH 593
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 162/330 (49%), Gaps = 10/330 (3%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++ +Y CG +A + + + V W L+ + + + AI + +MLR G KP+
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
FTL LKA G GR +H G++ NV+V ++L+ MY+R ++DA +F
Sbjct: 149 HFTLPYALKACGE-LPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVF 207
Query: 153 TALESK---NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH------FSYSSVFT 203
+ K + +SWN+++A H + S AL FSEM E S ++
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILP 267
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A AS +L Q K +H++ I++G AFV N L+D YAK GS+ DA KVFN + +DVVS
Sbjct: 268 ACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVS 327
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+M+TG Q G A FE M + I + +T+ V+ + G E F M
Sbjct: 328 WNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMI 387
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
G EP ++ + G L + ++
Sbjct: 388 LDGSEPNSVTIISLLSACASLGALSQGMEI 417
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 114/249 (45%), Gaps = 10/249 (4%)
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
+G+ ++ Y DA + + V WN L+ H ++ ++A+ MLR G
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P HF+ A S G+ +H + +G + FV N LV MY++ GS+EDA
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 251 KVFNRLLKR---DVVSWNSMLTGCAQHGLGKATVRWFEK--MLRNGIAPNQ----VTFLC 301
VF+ + ++ DV+SWNS++ + + + F + M+ + A N+ ++ +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ L + + + ++G + +D + G ++ A+K M +
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 362 TAAVWGALL 370
+ W A++
Sbjct: 325 VVS-WNAMV 332
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/567 (41%), Positives = 343/567 (60%), Gaps = 11/567 (1%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C +K R+V A I + D NT+++ YA+ G L EA++LF+E PV+D+ T
Sbjct: 209 CMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFT 268
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA++SGY QN + A +F M + N + ++++ D+ A
Sbjct: 269 WTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEAMP 324
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ WN +++ YA+ + A F + ++ +SW A+IAG+A+ GE+AL
Sbjct: 325 CQNVSSWN-----TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEAL 379
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM R+G +++S + A +LE GK VH V+K+G + +VGN L+ MY
Sbjct: 380 HLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMY 439
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G+I+DA VF + +++VVSWN+M+ G A+HG GK + FE M + GI P+ VT +
Sbjct: 440 CKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMV 499
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH GL+D+G YF ++ + +G+ HY +DLLGRAG LD A ++ MP
Sbjct: 500 GVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPF 559
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP AA WGALLGA R+H N ELG AA+ IFE++P +SG ++LL+N+YA++GR D R
Sbjct: 560 EPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRM 619
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ GVKK P SWVE +N +H F D HP+R I+ E+ K+K+ GYV +
Sbjct: 620 RLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSST 679
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL +++E+ L+ HSEKLA+AF +++ P G I + KN+RVC DCH+A K SK+
Sbjct: 680 KLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKI 739
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V R II+RD++RFHHF G CSCGDYW
Sbjct: 740 VGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/458 (19%), Positives = 188/458 (41%), Gaps = 59/458 (12%)
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN+ + + + R Q D A LF ++ ++ +SWNA+I+G + A + F +M
Sbjct: 52 WNIAITNHM-----RNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM 106
Query: 187 LREGFEPTH--FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
PT S++ + + +L + + + + +V++ N ++ YA++G
Sbjct: 107 ------PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPER--DVVSW--NAMLSGYAQNG 156
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+++A+++F+ + ++ +SWN ML Q+G + R FE + +++ C++
Sbjct: 157 YVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWEL----ISWNCMMG 212
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
L + +G F M E +E + T + + G L A + E P+
Sbjct: 213 GYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV-F 267
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGP--HILLANIYASAGRLNDAARARKM 422
W A++ + ++ A R+F+ P + + ++A Y R++ +AR++
Sbjct: 268 TWTAMVSGYVQNGMLD----EARRVFDGMPEKNSVSWNAIIAG-YVQCKRMD---QAREL 319
Query: 423 MKESGVKKEPACSWVETKNAVHMFVAND----DAHPQRAMIHKKWREISEKIKQIGYVPD 478
+ + + + + T A + +A D PQR I W I Q GY +
Sbjct: 320 FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI--SWAAIIAGYAQSGYGEE 377
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIH---IKKNIRV---------- 525
+ H+ + + L+ + + G +H +K +
Sbjct: 378 ALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLV 437
Query: 526 ----CGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
CG+ A+ + E+E++ +T + R GF
Sbjct: 438 MYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGF 475
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 28/269 (10%)
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
V WN I H R + + ALR F+ M R + S++++ + S + +
Sbjct: 50 VKWNIAITNHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLSNDKFYLARQLFEK 105
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
+ LV++ N ++ + ++ A +F+++ +RDVVSWN+ML+G AQ+G K
Sbjct: 106 MPTR--DLVSW--NVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEA 161
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF---ALMKKHGVEPEEAHYVTF 337
F++M N +++ +L A G +++ + F A + YV
Sbjct: 162 KEIFDEM----PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKR 217
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP-HD 396
L+ G+ DR MP E W ++ +N EL A+R+FE P D
Sbjct: 218 NRLVDARGIFDR-------MP-ERDEVSWNTMISG--YAQNGEL--LEAQRLFEESPVRD 265
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKE 425
+ + Y G L++A R M E
Sbjct: 266 VFTWTAMVSGYVQNGMLDEARRVFDGMPE 294
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/598 (38%), Positives = 362/598 (60%), Gaps = 35/598 (5%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L++L + H ++ +D+ + N++++ YAKCG L ++F +P +D+V+W
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWN 206
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++I+ + Q PE A+ LF +M +KPN T+ VL A A +D +FGR VH++ +
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSAC-AKKSDFEFGRWVHSYIER 265
Query: 123 YGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWFL 151
++ + +++LDMY + FD+M D A +
Sbjct: 266 NRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGI 325
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFTALASTGS 210
F A+ +++ +WNALI+ + + + ++AL F E+ L + +P + S +A A G+
Sbjct: 326 FDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGA 385
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
++ G W+H ++ K G +L + +L+DMY K G ++ A VF+ + ++DV W++M+ G
Sbjct: 386 MDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAG 445
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEP 329
A HG GK + F KM + + PN VTF +L ACSH GL++EG+ +F M+ +GV P
Sbjct: 446 LAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLP 505
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VD+LGRAGLL+ A++ I +MP+ P A+VWGALLGAC +H+NV L A ++
Sbjct: 506 GVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQL 565
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
EL+P + G ++LL+NIYA AG+ + + RK+M++ G+KKEP CS +E VH F+
Sbjct: 566 IELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 625
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFAL 508
D++HP I+ K EI +++ IGYVP+ SH+L ++++ +E L +HSEKLA+AF L
Sbjct: 626 DNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGL 685
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
IST I I KN+RVCGDCHS K SK+ +REI++RD RFHHFR+G CSC DYW
Sbjct: 686 ISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 200/412 (48%), Gaps = 42/412 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDM 58
+C+ K+LK+ +HA +L + D + ++ A A LD A+++FD++P ++
Sbjct: 44 QCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKF-GRQV 116
TW LI Y+ + P ++++F +ML P++FT ++KA A ++ F G+
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKA--ASELEELFTGKAF 158
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H +K +V++ +SL+ YA+ ++ + +F + ++ VSWN++I +
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+AL F EM + +P + V +A A E G+WVH+++ ++ + N +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA--- 293
+DMY K GS+EDA+++F+++ ++D+VSW +ML G A+ G A F+ M IA
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWN 338
Query: 294 -----------------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
P++VT + L+AC+ G +D G +KK
Sbjct: 339 ALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK 398
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
G++ + +D+ + G L +AL + VW A++ MH
Sbjct: 399 QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMH 449
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 165/364 (45%), Gaps = 16/364 (4%)
Query: 92 NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA--RFDQMDDAW 149
N TLS + + S + K +Q+HA L+ G ++ + S L+ A F +D A
Sbjct: 35 NHPTLSLIDQCS-----ETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQ 89
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-PTHFSYSSVFTALAST 208
+F + N +WN LI +A S ++L F ML + + P F++ + A +
Sbjct: 90 QVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASEL 149
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
L GK H VIK F+ N+L+ YAK G + +VF + +RDVVSWNSM+
Sbjct: 150 EELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMI 209
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
T Q G + + F++M + PN +T + VL+AC+ + G+ + ++++ +
Sbjct: 210 TAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIG 269
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY-AAE 387
+D+ + G ++ A + +MP E W +L ++G Y AA+
Sbjct: 270 ESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVG-----YAKIGEYDAAQ 323
Query: 388 RIFELDPH-DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
IF+ P+ D L + Y G+ +A ++ S K + V T +A
Sbjct: 324 GIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQL 383
Query: 447 VAND 450
A D
Sbjct: 384 GAMD 387
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I K + + ++++ Y KCG L +A +F + KD+ W
Sbjct: 380 CAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVW 439
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD--KFGRQVHA 118
+A+I+G + + ++AI LFS+M +KPN T +++L A S G ++ F Q+
Sbjct: 440 SAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQME- 498
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKS 174
L YG V + ++D+ R +++A L + S W AL+ H
Sbjct: 499 --LVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV 556
Query: 175 EGEKALRTFSEMLREGFEP-THFSYSSVFTALASTGSLEQGKW 216
E+A E+ EP H +Y L S + GKW
Sbjct: 557 LAEQACSQLIEL-----EPGNHGAY-----VLLSNIYAKAGKW 589
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/599 (37%), Positives = 361/599 (60%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
C LK KE + +H H+L ++ D+ + ++++ Y K G
Sbjct: 113 CAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172
Query: 42 -----------CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
++ A+K+FDE+PVKD+V+W A+ISGY+ + A+ LF +M++ +K
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ +V+ A A + + GRQVH++ +G N+ + ++L+D+Y++ +++ A
Sbjct: 233 PDESTMVTVVSAC-AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACG 291
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L +K+ +SWN +I G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 292 LFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351
Query: 211 LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
++ G+W+H ++ K G + + +L+DMYAK G IE A +VFN + R + + N+M+
Sbjct: 352 IDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMI 411
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGV 327
G A HG A F +M +NGI P+ +TF+ +L+ACSH+G+LD G+ F ++ + + +
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKI 471
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG GL A + I M +EP +W +LL AC+MH NVELG A+
Sbjct: 472 TPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQ 531
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
++ +++P + G ++LL+NIYA+AGR N+ A R ++ + G+KK P CS +E + VH F+
Sbjct: 532 KLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I+ E+ +++ G+VPD+S VL +++ ++ L+ HSEKLA+AF
Sbjct: 592 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFG 651
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHFRDG CSC DYW
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 204/428 (47%), Gaps = 38/428 (8%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWT 62
K L+ RI+HA ++ + N + +L D A +F+ + +++ W
Sbjct: 13 KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWN 72
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ G++ + P +AI L+ M+ LGL PN +T +LK S A K G+Q+H LK
Sbjct: 73 TMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLK-SCAKLKVSKEGQQIHGHVLK 131
Query: 123 YGYDWNVYVGSSLLDMYAR----------FD---------------------QMDDAWFL 151
GY+ ++YV +SL+ MY + FD ++ A +
Sbjct: 132 LGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKM 191
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + K+ VSWNA+I+G+A ++AL F EM++ +P + +V +A A +GS+
Sbjct: 192 FDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSI 251
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+ G+ VH+ + G + N L+D+Y+K G +E A +F L +DV+SWN+M+ G
Sbjct: 252 QLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGY 311
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GVEP 329
L K + F++MLR+G PN VT L +L AC+ G +D G+ + K GV
Sbjct: 312 THLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTN 371
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG-ACRMHKNVELGAYAAER 388
+ + +D+ + G ++ A + M +A + G A N ++ R
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMR 431
Query: 389 IFELDPHD 396
++P D
Sbjct: 432 KNGIEPDD 439
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/558 (43%), Positives = 347/558 (62%), Gaps = 7/558 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA L D+ + + + Y+K G EAR +FDEMP +++ TW A +S Q+ +
Sbjct: 131 LHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGR 190
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+AI F + L + +PN T + L A A + GRQ+H F ++ Y +V V +
Sbjct: 191 CLDAIAAFKKFLCVDGEPNAITFCAFLNAC-ADIVSLELGRQLHGFIVRSRYREDVSVFN 249
Query: 134 SLLDMYARFDQMDDAWFLFTALES--KNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
L+D Y + + + +F+ + S +N VSW +L+A + E E+A F + +E
Sbjct: 250 GLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-V 308
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
EPT F SSV +A A G LE G+ VHA +K+ + FVG+ LVD+Y K GSIE AE+
Sbjct: 309 EPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQ 368
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQVTFLCVLTACSHA 309
VF + +R++V+WN+M+ G A G + F++M GIA + VT + VL+ACS A
Sbjct: 369 VFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRA 428
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G ++ G F M+ ++G+EP HY VDLLGR+GL+DRA +FI+ MPI PT +VWGA
Sbjct: 429 GAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGA 488
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGAC+MH +LG AAE++FELDP DSG H++ +N+ ASAGR +A RK M++ G+
Sbjct: 489 LLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGI 548
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK SWV KN VH+F A D H + + I ++ ++K+ GYVPD++ L ++
Sbjct: 549 KKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEE 608
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+E+ +++ HSEK+ALAF LI+ P G I I KN+R+C DCHSA KF SK+V REIIVRD
Sbjct: 609 EEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRD 668
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFH F+DG+CSC DYW
Sbjct: 669 NNRFHRFKDGWCSCKDYW 686
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 183/369 (49%), Gaps = 14/369 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQ----NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
R VHAHIL + +D + N ++N Y+K + A+ + + +VTWT+LIS
Sbjct: 26 GRAVHAHILRT---HDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLIS 82
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G N + +A++ FS M R + PN FT V KAS A G+Q+HA LK G
Sbjct: 83 GCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKAS-ASLHMPVTGKQLHALALKGGNI 141
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V+VG S DMY++ +A +F + +N +WNA ++ + A+ F +
Sbjct: 142 LDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKF 201
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
L EP ++ + A A SLE G+ +H +++S + V N L+D Y K G I
Sbjct: 202 LCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDI 261
Query: 247 EDAEKVFNRL--LKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
+E VF+R+ +R+VVSW S+L Q H +A + + + R + P VL
Sbjct: 262 VSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQA--RKEVEPTDFMISSVL 319
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
+AC+ G L+ G+ AL K VE VDL G+ G ++ A + REMP E
Sbjct: 320 SACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP-ERNL 378
Query: 364 AVWGALLGA 372
W A++G
Sbjct: 379 VTWNAMIGG 387
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 158/298 (53%), Gaps = 20/298 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMV 59
C + L+ R +H I+ S ++ D+++ N +++ Y KCG + + +F + +++V
Sbjct: 220 CADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVV 279
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W +L++ QN + E A ++F Q R ++P F +SSVL A A + GR VHA
Sbjct: 280 SWCSLLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSAC-AELGGLELGRSVHAL 337
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK + N++VGS+L+D+Y + ++ A +F + +N V+WNA+I G+A + + A
Sbjct: 338 ALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMA 397
Query: 180 LRTFSEMLRE--GFEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFV 232
L F EM G ++ + SV +A + G++E+G + + I+ G + A V
Sbjct: 398 LSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACV 457
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG---LGK-ATVRWFE 285
VD+ +SG ++ A + R+ +S W ++L C HG LGK A + FE
Sbjct: 458 ----VDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFE 511
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VHA L + + +I + + +++ Y KCG ++ A ++F EMP +++VTW
Sbjct: 322 CAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTW 381
Query: 62 TALISGYSQNDQPENAIILFSQML--RLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV-H 117
A+I GY+ + A+ LF +M G+ + TL SVL A S AGA + G Q+
Sbjct: 382 NAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVER--GLQIFE 439
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARK 173
+ +YG + + ++D+ R +D A+ + +S W AL+ H +
Sbjct: 440 SMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKT 499
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
G+ A E+ +P VF+ + ++ G+W A +++
Sbjct: 500 KLGKIAAEKLFEL-----DPDDSGNHVVFSNMLASA----GRWEEATIVR 540
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/544 (42%), Positives = 335/544 (61%), Gaps = 2/544 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ N ++N Y + G L+ A+KLFDEM +++ TW A+I+G +Q + + A+ LF +
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M LG P++FTL SVL+ AG G++VHA LK G++ + VGSSL MY +
Sbjct: 185 MYGLGFLPDEFTLGSVLRGC-AGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSG 243
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ D L ++ + V+WN LIAG A+ E+ L ++ M GF P ++ SV +
Sbjct: 244 SLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A + +L QG+ +HA VIK+G V V ++L+ MY++SG +ED+ K F DVV
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM- 322
W+SM+ HG G+ + F +M + N+VTFL +L ACSH+GL ++G YF LM
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
KK+ ++P HY VDLLGRAG L+ A IR MP++P +W LL AC++HK E+
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA 483
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
+E I +LDP D+ ++LL+NI+ASA + ++ RK M++ V+KEP SW+E KN
Sbjct: 484 ERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNL 543
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
VH F D +HPQ I +E+ ++KQ GYVP+ VL D +E+E L HSEK
Sbjct: 544 VHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKF 603
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AFAL++T I + KN+RVC DCH+A K S++ REIIVRD +RFHHF+DG CSC
Sbjct: 604 AIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSC 663
Query: 563 GDYW 566
G+YW
Sbjct: 664 GNYW 667
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 147/290 (50%), Gaps = 3/290 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L + VHA +L F+ + +++ + Y K G L + KL MP++ +V W
Sbjct: 204 CAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAW 263
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+G +QN PE + ++ M G +P++ T SVL A AT + G+Q+HA +
Sbjct: 264 NTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQ-GQQIHAEVI 322
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + V SSL+ MY+R ++D+ F E+ + V W+++IA + GE+AL
Sbjct: 323 KAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALE 382
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +M E ++ S+ A + +G E+G ++K T +VD+
Sbjct: 383 LFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLL 442
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
++G +E+AE + + ++ D + W ++L C H + R E++++
Sbjct: 443 GRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIK 492
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS------ 245
+P+ FS+ + + GSL GK VH+ +I SGG F+ N L++ Y+K G
Sbjct: 61 DPSLFSH--LLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLV 118
Query: 246 -------------------------IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
+E A+K+F+ + +R++ +WN+M+ G Q K
Sbjct: 119 LFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQA 178
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ F++M G P++ T VL C+ L GQ A + K G E + +
Sbjct: 179 LSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHM 238
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
++G L K I+ MPI T W L+
Sbjct: 239 YIKSGSLSDGEKLIKSMPIR-TVVAWNTLIAG 269
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 203/369 (55%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
+ + A AS +LEQGK VHA +IK G +L V N LVDMY K G IEDA++VF++LL+
Sbjct: 2 AGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLE 61
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
DV SWN+M++G AQHG GK V FE+ML+ G+ PNQ+TF+ VL+ CSHAGL+DEG+ Y
Sbjct: 62 PDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNY 121
Query: 319 F-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
F ++ + HG+ P+ HY VDL GRAG LD AL FI +MP+EP A+VWG+LLGACR+H
Sbjct: 122 FDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHG 181
Query: 378 NVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWV 437
N+EL A E++ EL P + G ++LL+NIYA+AGR +DA + RKMMK+ VKKEP CSW+
Sbjct: 182 NIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWI 241
Query: 438 ETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQV 497
E +N VH F+ D +HPQ I++ ++ ++K GY+P+++ VL +++++E L
Sbjct: 242 EVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGH 301
Query: 498 HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRD 557
HSEKLA+AF +ISTPPG+TI + KN+RVCGDCH+A KF S++V REI++RDT+RFHHF+D
Sbjct: 302 HSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKD 361
Query: 558 GFCSCGDYW 566
G CSCGDYW
Sbjct: 362 GQCSCGDYW 370
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 129/238 (54%), Gaps = 6/238 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
++ +L+A + A ++ G+QVHA +K G++ +V V + L+DMY + +++DA +F+ L
Sbjct: 1 MAGILRACASVAALEQ-GKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKL 59
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+ SWNA+I+G A+ G++A+ F +ML+ G +P ++ V + + G +++G+
Sbjct: 60 LEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGR 119
Query: 216 -WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQ 273
+ + G A + +VD++ ++G +++A N++ ++ + W S+L C
Sbjct: 120 NYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRV 179
Query: 274 HGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
HG + R E+++ + P N T++ + + AG D+ +MK V+ E
Sbjct: 180 HGNIELAERAVEQLIE--LTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKE 235
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L++ + VHA I+ F+ D+++ N +++ Y KCG +++A+++F ++ D+ +W
Sbjct: 8 CASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASW 67
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISG +Q+ + A++LF QML+ G+KPNQ T VL D+ +
Sbjct: 68 NAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTR 127
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARKSEGE 177
+G S ++D++ R +D+A F+ N W +L+ H E
Sbjct: 128 DHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAE 187
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTA 204
+A+ E+ E T+ S+++ A
Sbjct: 188 RAVEQLIELTPEN-PGTYVLLSNIYAA 213
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 349/567 (61%), Gaps = 23/567 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + L+E R VHA ++ + ++ + + ++ YA+CG L++AR + D MP +++V+
Sbjct: 44 ECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVS 103
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+ISGYSQN++P+ A LF MLR G+ +QVHAF
Sbjct: 104 WTAMISGYSQNERPDQAWELFIMMLRAGIHQV---------------------KQVHAFA 142
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K ++ +++VGSSLLDMYA+ + + +A +F L +++ VS+ A+++G+ + E+AL
Sbjct: 143 VKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEAL 202
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F + EG + +++++ AL+ S++ GK VH +++ + N+L+DMY
Sbjct: 203 DLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMY 262
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G + + +VF+ + +R VVSWN+ML G +HGL V+ F M + + P+ VT L
Sbjct: 263 SKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMC-DEVKPDSVTLL 321
Query: 301 CVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ SH GL+DEG F ++K+ HY +DLLGR+G L +AL I +MP
Sbjct: 322 AVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPF 381
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+PT A+WG+LLGACR+H NV +G + A+++ +++P ++G +++L+NIYA+AG D R
Sbjct: 382 QPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRV 441
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK+M + V KEP SW+ +H F + + HP++ I+ K +EI IK G+VPD
Sbjct: 442 RKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDL 501
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL D +++E L HSEKLA+ F L+STP TI + KN+R+C DCH+ KF SKV
Sbjct: 502 SCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKV 561
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI +RD NRFH +G C+CGDYW
Sbjct: 562 YGREISLRDKNRFHLITEGACTCGDYW 588
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y T +L +G+ VHA ++ +G + ++ LV MYA+ G++EDA V + +
Sbjct: 38 YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
+R+VVSW +M++G +Q+ F MLR GI
Sbjct: 98 ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI 132
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/567 (41%), Positives = 343/567 (60%), Gaps = 11/567 (1%)
Query: 2 CTHLKKLKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C +K R+V A I + D NT+++ YA+ G L EA++LF+E PV+D+ T
Sbjct: 128 CMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFT 187
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA++SGY QN + A +F M + N + ++++ D+ A
Sbjct: 188 WTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEAMP 243
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ WN +++ YA+ + A F + ++ +SW A+IAG+A+ GE+AL
Sbjct: 244 CQNVSSWN-----TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEAL 298
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F EM R+G +++S + A +LE GK VH V+K+G + +VGN L+ MY
Sbjct: 299 HLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMY 358
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G+I+DA VF + +++VVSWN+M+ G A+HG GK + FE M + GI P+ VT +
Sbjct: 359 CKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMV 418
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH GL+D+G YF ++ + +G+ HY +DLLGRAG LD A ++ MP
Sbjct: 419 GVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPF 478
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP AA WGALLGA R+H N ELG AA+ IFE++P +SG ++LL+N+YA++GR D R
Sbjct: 479 EPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRM 538
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ GVKK P SWVE +N +H F D HP+R I+ E+ K+K+ GYV +
Sbjct: 539 RLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSST 598
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL +++E+ L+ HSEKLA+AF +++ P G I + KN+RVC DCH+A K SK+
Sbjct: 599 KLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKI 658
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V R II+RD++RFHHF G CSCGDYW
Sbjct: 659 VGRLIILRDSHRFHHFNGGQCSCGDYW 685
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/568 (39%), Positives = 348/568 (61%), Gaps = 7/568 (1%)
Query: 2 CTHLKKLKEARIVHAHI--LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C K L + +HA LG A+ D+A + +++ YA L AR LFD++P +++
Sbjct: 57 CIDSKALNPGKQLHAQFYHLGIAYNQDLATK--LVHLYAVSNSLLNARNLFDKIPKQNLF 114
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W LI GY+ N +NAIIL+ +ML GL+P+ FTL VLKA A + + GR +H +
Sbjct: 115 LWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGE-GRSIHEY 173
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G++ +++VG++L+DMYA+ + DA +F + ++ V WN+++A +A+ +++
Sbjct: 174 VIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES 233
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ EM G PT + +V ++ A L G+ +H + G Q V L+DM
Sbjct: 234 ISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDM 293
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GS++ A +F RL ++ VVSWN+++TG A HGL + F+KM R P+ +TF
Sbjct: 294 YAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKEDRPDHITF 352
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL ACS LLDEG+ + LM + +G+ P HY +DLLG G LD A IR M
Sbjct: 353 VGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMS 412
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P + VWGALL +C++H NVEL A E++ EL+P DSG +++LAN+YA +G+ +
Sbjct: 413 VKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEK 472
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R++M + +KK ACSW+E KN V+ F+A D +H I+ + + + + + GY PD
Sbjct: 473 LRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPD 532
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ V ++ E+ + + HSE+LA+AF LIST PG+ + I KN+R+C DCH A KF SK
Sbjct: 533 TGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISK 592
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++EREI VRD NR+H F+ G CSCGD+W
Sbjct: 593 IMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 189 EGFEP---THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+ F P TH+ Y+S+ + + +L GK +HA G + LV +YA S S
Sbjct: 38 DSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNS 97
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ +A +F+++ K+++ WN ++ G A +G + + KML G+ P+ T VL A
Sbjct: 98 LLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKA 157
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
CS + EG+ + K G E + +D+ + G + A + ++ + A +
Sbjct: 158 CSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVL 216
Query: 366 WGALLGA 372
W ++L A
Sbjct: 217 WNSMLAA 223
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/555 (40%), Positives = 349/555 (62%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH+ ++ F ++ + N +L+ Y+K + EARKLF EMP D +++ LI+ + N +
Sbjct: 262 VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGR 321
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E ++ LF ++ QF +++L + A + + + GRQ+H+ + V VG+
Sbjct: 322 VEESLELFRELQFTRFDRRQFPFATLLSIA-ANSLNLEMGRQIHSQAIVTDAISEVLVGN 380
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ D+ +A +F L ++ V W ALI+G+ +K E L+ F EM R
Sbjct: 381 SLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGA 440
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+Y+S+ A A+ SL GK +H+ +I+SG F G+ LVDMYAK GSI++A ++F
Sbjct: 441 DSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMF 500
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ R+ VSWN++++ AQ+G G +R FE+M+ +G+ PN V+FL +L ACSH GL++
Sbjct: 501 QEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVE 560
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG YF M + + +EP HY + VD+L R+G D A K + MP EP +W ++L +
Sbjct: 561 EGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNS 620
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+HKN EL AA+++F + D+ P++ ++NIYA+AG + + +K ++E G++K
Sbjct: 621 CRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKV 680
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
PA SWVE K H+F AND +HPQ I +K E+ +++++ GY PDS+ L D++ +
Sbjct: 681 PAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVK 740
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L+ HSE++A+AFALISTP GS I + KN+R C DCH+A K SK+V REI VRD++R
Sbjct: 741 VESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSR 800
Query: 552 FHHFRDGFCSCGDYW 566
FHHF DG CSC DYW
Sbjct: 801 FHHFTDGSCSCKDYW 815
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 203/370 (54%), Gaps = 2/370 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + + E VH H++ + + + + N++L++Y K L A LF M KD VT+
Sbjct: 150 TEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFN 209
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
AL++GYS+ +AI LF +M LG +P++FT ++VL A G D +FG+QVH+F +K
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA-GIQMDDIEFGQQVHSFVVK 268
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ WNV+V ++LLD Y++ D++ +A LF + + +S+N LI A E++L
Sbjct: 269 CNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLEL 328
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F E+ F+ F ++++ + A++ +LE G+ +H+ I + VGN+LVDMYAK
Sbjct: 329 FRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAK 388
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
+A ++F L + V W ++++G Q GL + ++ F +M R I + T+ +
Sbjct: 389 CDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASI 448
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L AC++ L G+ + + + G VD+ + G + AL+ +EMP+ +
Sbjct: 449 LRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNS 508
Query: 363 AAVWGALLGA 372
+ W AL+ A
Sbjct: 509 VS-WNALISA 517
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 214/448 (47%), Gaps = 45/448 (10%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ NT++ Y K G L AR LFD M + +VTWT LI GY+Q+++ A LF+ M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R G+ P+ TL+++L + ++ QVH +K GYD + V +SLLD Y + +
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVA-QVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A LF + K+ V++NAL+ G++++ A+ F +M GF P+ F++++V TA
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAG 250
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+E G+ VH+ V+K FV N L+D Y+K I +A K+F + + D +S+N
Sbjct: 251 IQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYN 310
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ--------- 316
++T CA +G + ++ F ++ Q F +L+ +++ L+ G+
Sbjct: 311 VLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVT 370
Query: 317 -------------GYFALMKKHG----VEPEEAH-----YVTFVDLLGRAGLLDRALKFI 354
+A K G + + AH + + + GL + LK
Sbjct: 371 DAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLF 430
Query: 355 REM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFE---LDPHDSGPHILLANIYA 408
EM I +A + ++L AC ++ LG RI L SG L ++YA
Sbjct: 431 VEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGS--ALVDMYA 488
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSW 436
G + +A +M +E V+ + SW
Sbjct: 489 KCGSIKEAL---QMFQEMPVRN--SVSW 511
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 82 SQMLRLGLKPN----QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ M++ G PN F + + L+ GA F H NV ++++
Sbjct: 31 ASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHK---------NVISTNTMIM 81
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
Y + + A LF ++ ++ V+W LI G+A+ + +A F++M R G P H +
Sbjct: 82 GYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHIT 141
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+++ + S+ + VH HV+K G V N+L+D Y K+ S+ A +F +
Sbjct: 142 LATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMA 201
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
++D V++N++LTG ++ G + F KM G P++ TF VLTA ++ GQ
Sbjct: 202 EKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQ 261
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
+ + K +D + + A K EMP E + L+ C +
Sbjct: 262 VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCCAWNG 320
Query: 378 NVE 380
VE
Sbjct: 321 RVE 323
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L + +H+ I+ S +++ + +++ YAKCG + EA ++F EMPV++ V+W
Sbjct: 452 CANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSW 511
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALIS Y+QN +A+ F QM+ GL+PN + S+L A ++ + ++
Sbjct: 512 NALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQ 571
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
Y + +S++DM R + D+A L + +E+ W++++
Sbjct: 572 VYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSIL 618
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/554 (41%), Positives = 338/554 (61%), Gaps = 35/554 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ ++ + N +++ Y KCGCL EA ++ DZMP +D+V+W +L++G ++N Q
Sbjct: 1148 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQ 1207
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++A+ + +M LGLKP+ T++S+L A V +
Sbjct: 1208 FDDALEVCKEMELLGLKPDAGTMASLLPA----------------------------VTN 1239
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+ LD + +M F L +K+ VSWN +IA + S +A+ F +M +P
Sbjct: 1240 TCLDNVSFVKEM------FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 1293
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S +SV A +L G+ +H +V++ Q + N L+DMYAK G +E A +VF
Sbjct: 1294 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 1353
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ RDVVSW SM++ +G G+ V F +M G+ P+ + F+ VL+ACSHAGLLD
Sbjct: 1354 DQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLD 1413
Query: 314 EGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ YF LM + + P H+V VDLLGRAG +D A FI++MP+EP VWGALL A
Sbjct: 1414 EGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR++ N+ +G AA+++F+L P SG ++LL+NIYA AGR D R +MK G+KK P
Sbjct: 1474 CRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMP 1533
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
S E N VH F+A D +HPQ I+++ + K+K+ GYVP++ L +++++E
Sbjct: 1534 GVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKE 1593
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L VHSEKLA+AFA+++T PGS I I KN+RVCGDCH A K SK+V REI +RDTNRF
Sbjct: 1594 CHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRF 1653
Query: 553 HHFRDGFCSCGDYW 566
HHF +G CSCGDYW
Sbjct: 1654 HHFYNGVCSCGDYW 1667
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 173/410 (42%), Gaps = 33/410 (8%)
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGA------TDDKFGRQVHA-FCLKYGYDWNVYVGSSL 135
Q L L ++ +FT V+ D K+ +++H+ C+ + N +G L
Sbjct: 1007 QTLVLSIQKPKFTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKL 1066
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
+ YA + +F + KN V +N +I + AL F M G +P H
Sbjct: 1067 MRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDH 1126
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
++Y V A + + L G +HA V++ G L FVGN L+ MY K G + +A +V +
Sbjct: 1127 YTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZ 1186
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ RDVVSWNS++ GCA++G + ++M G+ P+ T +L A ++ L +
Sbjct: 1187 MPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVS 1246
Query: 316 --QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ F + + +++ A +D L+ + + ++P A ++L AC
Sbjct: 1247 FVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQ-MEDHAVDPDAISIASVLPAC 1305
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLAN----IYASAGRLNDAARARKMMKESGVK 429
+ LG E + P++LL N +YA G L A MK V
Sbjct: 1306 GDLSALLLGRRIHEYVVR---KRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDV- 1361
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
SW +A M DA + +++ +G PDS
Sbjct: 1362 ----VSWTSMISAYGMNGKGRDA-----------VSLFSRMQDLGLNPDS 1396
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +H +++ + ++ ++N +++ YAKCGCL+ AR++FD+M +D+V+W
Sbjct: 1305 CGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 1364
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD-KFGRQVHAF 119
T++IS Y N + +A+ LFS+M LGL P+ SVL A S AG D+ ++ ++
Sbjct: 1365 TSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTE 1424
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEK 178
K +V ++D+ R Q+D+A+ F+ NE W AL++
Sbjct: 1425 ECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS---------- 1472
Query: 179 ALRTFSEML 187
A R +S M+
Sbjct: 1473 ACRVYSNMI 1481
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/544 (42%), Positives = 328/544 (60%), Gaps = 4/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ + + + Y K D+ARKLFDE+P +++ TW A IS + +P+ AI F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R+G +PN T L A G D G Q+H + G+D +V V + L+D Y + Q+
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLD-LGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQI 260
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ +F + KN VSW +L+A + + E EKA + +E E + F SSV +A
Sbjct: 261 RSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSAC 320
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A LE G+ +HAH +K+ + FVG+ LVDMY K G IED+E+ F+ + ++++V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLN 380
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGI--APNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
S++ G A G + FE M G APN +TF+ +L+ACS AG ++ G F MK
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMK 440
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+G+EP HY VD+LGRAG++++A +FI++MPI+PT +VWGAL ACRMH LG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLG 500
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AAE +F+LDP DSG H+LL+N +A+AGR +A R+ MK G+KK SW+ KN
Sbjct: 501 ILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQ 560
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
VH F A D +H I ++ K++ GY PD L +++E+ A++ HSEKL
Sbjct: 561 VHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
ALAF L++ P I I KN+R+CGDCHS FKF S V+REIIVRD NRFH F+DG CSC
Sbjct: 621 ALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680
Query: 563 GDYW 566
DYW
Sbjct: 681 KDYW 684
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 185/395 (46%), Gaps = 10/395 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIA-MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++ R+VHA I+ + + N ++N Y+K + AR + P +++V+WT+L+S
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVS 81
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G +QN A+ F +M R G+ PN FT V KA A G+Q+HA +K G
Sbjct: 82 GLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAV-ASLRLPVTGKQIHALAVKCGRI 140
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V+VG S DMY + DDA LF + +N +WNA I+ ++A+ F E
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEF 200
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R G +P ++ A + L+ G +H V +SG V N L+D Y K I
Sbjct: 201 RRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQI 260
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+E +F + ++ VSW S++ Q H KA+V + + + + + VL+A
Sbjct: 261 RSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYL-RSRKEIVETSDFMISSVLSA 319
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ L+ G+ A K VE VD+ G+ G ++ + + EMP E
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVT 378
Query: 366 WGALLGACRMHKNVELGAYAAERIFE-LDPHDSGP 399
+L+G V++ A +FE + P GP
Sbjct: 379 LNSLIGGYAHQGQVDM----ALALFEDMAPRGCGP 409
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +HAH + + + +I + + +++ Y KCGC++++ + FDEMP K++VT
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTL 379
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL--KPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+LI GY+ Q + A+ LF M G PN T S+L A S AGA ++ + +
Sbjct: 380 NSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGM-KIFDS 438
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGE 177
YG + S ++DM R ++ A+ + K +S W AL +A + G+
Sbjct: 439 MKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL--QNACRMHGK 496
Query: 178 KALRTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
L + +P H S+ F A G+W A+ ++
Sbjct: 497 PHLGILAAENLFKLDPKDSGNHVLLSNTFAA--------AGRWAEANTVR 538
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 207 STGSLEQGKWVHAHVIKS-GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
ST S+ G+ VHA ++K+ F+ N L++MY+K E A V R+VVSW
Sbjct: 18 STSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWT 77
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
S+++G AQ+G + F +M R G+APN TF CV A + L G+ AL K
Sbjct: 78 SLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKC 137
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G + + D+ + L D A K E+P E W A +
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWNAYI 181
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/553 (40%), Positives = 335/553 (60%), Gaps = 1/553 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H F +++ +QN++++ YAK G + AR +FD++ + +V+WT++ISGY QN
Sbjct: 107 IHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGD 166
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P A+ +F +M + +KP+ L SV+ A D G+ +H K G ++ +
Sbjct: 167 PMEALNVFKEMRQCNVKPDWIALVSVMTAY-TNVEDLGQGKSIHGLVTKLGLEFEPDIVI 225
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL MYA+ ++ A F F +E N + WNA+I+G+A GE+A++ F EM+ +
Sbjct: 226 SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRV 285
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ S A A GSLE +W+ ++ KS + FV L+DMYAK GSI A VF
Sbjct: 286 DSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVF 345
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+R+ +DVV W+ M+ G HG G+ + + +M + G+ PN TF+ +LTAC ++GL+
Sbjct: 346 DRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVK 405
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
EG F LM HG+EP HY VDLLGRAG L++A FI MPI+P +VWGALL AC
Sbjct: 406 EGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC 465
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
++H+ V LG AAE++F LDP+++G ++ L+N+YASA A R MM + G+ K+
Sbjct: 466 KIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLG 525
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
S +E + F D +HP+ I ++ + +++K GYVP VL + +E E
Sbjct: 526 HSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEE 585
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSE+LA+A+ +IST PG+T+ I KN+R C +CHSA K SK+V+REII+RD RFH
Sbjct: 586 TLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFH 645
Query: 554 HFRDGFCSCGDYW 566
HF+DG CSCGD+W
Sbjct: 646 HFKDGVCSCGDFW 658
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 197/398 (49%), Gaps = 5/398 (1%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
+NA G ++ A K F E+ D++ W A+I GY+Q + + I ++ M + PN
Sbjct: 26 INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC 85
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
FT VLKA G G + + G+Q+H KYG+ NV+V +SL+ MYA+F Q+ A +F
Sbjct: 86 FTFLYVLKACG-GTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 144
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
L + VSW ++I+G+ + + +AL F EM + +P + SV TA + L Q
Sbjct: 145 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 204
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
GK +H V K G + + +L MYAK G +E A FNR+ K +++ WN+M++G A
Sbjct: 205 GKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYAN 264
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+G G+ ++ F +M+ I + +T + A + G L+ + + K +
Sbjct: 265 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 324
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFE 391
+D+ + G + A + + + + +W ++ +H + + + Y +
Sbjct: 325 NTGLIDMYAKCGSIYLA-RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 383
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
+ P+D G I L ++G + + +M + G++
Sbjct: 384 VCPND-GTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 420
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 147/281 (52%), Gaps = 18/281 (6%)
Query: 3 THLKKLKEARIVHAHI--LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
T+++ L + + +H + LG F+ DI + T + YAK G ++ AR F+ M +++
Sbjct: 197 TNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM--YAKRGLVEVARFFFNRMEKPNLIL 254
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL-SSVLKASGAGATDDKFGRQVHAF 119
W A+ISGY+ N E AI LF +M+ ++ + T+ S+VL ++ G+ + R + +
Sbjct: 255 WNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE--LARWLDGY 312
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K Y + +V + L+DMYA+ + A +F + K+ V W+ +I G+ G++A
Sbjct: 313 ISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEA 372
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-----QLVAFVGN 234
+ ++EM + G P ++ + TA ++G +++G W H++ G Q + V
Sbjct: 373 ICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG-WELFHLMPDHGIEPHHQHYSCV-- 429
Query: 235 TLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
VD+ ++G + A + + + +K V W ++L+ C H
Sbjct: 430 --VDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ AR + +I S +++D + +++ YAKCG + AR +FD + KD+V W+ +I G
Sbjct: 303 LELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMG 362
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYD 126
Y + + AI L+++M + G+ PN T +L A +G K G ++ +G +
Sbjct: 363 YGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLV--KEGWELFHLMPDHGIE 420
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGEKA 179
+ S ++D+ R ++ A+ ++ K VS W AL++ H + GE A
Sbjct: 421 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIA 477
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
V+ +I SG F+ ++ G + A K F + + D++ WN+++ G Q +
Sbjct: 6 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
A +R + M + + PN TFL VL AC G EG G
Sbjct: 66 VDAPIRMYMDMQISQVHPNCFTFLYVLKAC--GGTSVEGIG 104
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/554 (41%), Positives = 337/554 (60%), Gaps = 35/554 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ ++ + N +++ Y KCGCL EA ++ D+MP +D+V+W +L++G ++N Q
Sbjct: 159 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQ 218
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++A+ + +M LGLKP+ T++S+L A V +
Sbjct: 219 FDDALEVCKEMELLGLKPDAGTMASLLPA----------------------------VTN 250
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+ LD + +M F L +K+ VSWN +IA + S +A+ F +M +P
Sbjct: 251 TCLDNVSFVKEM------FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 304
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S +SV A +L G+ +H +V++ Q + N L+DMYAK G +E A +VF
Sbjct: 305 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 364
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ RDVVSW SM++ +G G+ V F +M G+ P+ + F+ VL+ACSHAGLLD
Sbjct: 365 DQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLD 424
Query: 314 EGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ YF LM + + P H+V VDLLGRAG +D A FI++MP+EP VWGALL A
Sbjct: 425 EGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR++ N+ +G AA+++F+L P SG ++LL+NIYA AGR D R +MK G+KK P
Sbjct: 485 CRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMP 544
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
S E N VH F+A D +HPQ I+++ K+K+ GYVP++ L +++++E
Sbjct: 545 GVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKE 604
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L VHSEKLA+AFA+++T PGS I I KN+RVCGDCH A K SK+V REI +RDTNRF
Sbjct: 605 CHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRF 664
Query: 553 HHFRDGFCSCGDYW 566
HHF +G CSCGDYW
Sbjct: 665 HHFYNGVCSCGDYW 678
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 175/410 (42%), Gaps = 33/410 (8%)
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGA------TDDKFGRQVHA-FCLKYGYDWNVYVGSSL 135
Q L L ++ +FT +V+ D K+ +++H+ C+ + N +G L
Sbjct: 18 QTLVLSIQKPKFTQQNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKL 77
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
+ YA + +F + KN V +N +I + AL F M G +P H
Sbjct: 78 MRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDH 137
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
++Y V A + + L G +HA V++ G L FVGN L+ MY K G + +A +V ++
Sbjct: 138 YTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQ 197
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ RDVVSWNS++ GCA++G + ++M G+ P+ T +L A ++ L +
Sbjct: 198 MPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVS 257
Query: 316 --QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ F + + +++ A +D L+ + + ++P A ++L AC
Sbjct: 258 FVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQ-MEDHAVDPDAISIASVLPAC 316
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLAN----IYASAGRLNDAARARKMMKESGVK 429
+ LG E + P++LL N +YA G L A MK V
Sbjct: 317 GDLSALLLGRRIHEYVVR---KRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDV- 372
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
SW +A M DA + +++ +G PDS
Sbjct: 373 ----VSWTSMISAYGMNGKGRDA-----------VSLFSRMQDLGLNPDS 407
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +H +++ + ++ ++N +++ YAKCGCL+ AR++FD+M +D+V+W
Sbjct: 316 CGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 375
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD-KFGRQVHAF 119
T++IS Y N + +A+ LFS+M LGL P+ SVL A S AG D+ ++ ++
Sbjct: 376 TSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTE 435
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEK 178
K +V ++D+ R Q+D+A+ F+ NE W AL++
Sbjct: 436 ECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS---------- 483
Query: 179 ALRTFSEML 187
A R +S M+
Sbjct: 484 ACRVYSNMI 492
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/550 (40%), Positives = 333/550 (60%), Gaps = 3/550 (0%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
++ + F+ D M+N +L + KCG + +AR+LFDEMP +++V+W +ISG A
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
LF M FT + +++AS AG GRQ+HA LK G +++V +L+D
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRAS-AGLELISIGRQLHACTLKMGIGDDIFVSCALID 119
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY++ ++DA F+F + K V WN +IAG+A E+AL + EM G + HF+
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFT 179
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+S + A S+E K HA +I+ G LVD Y+K G IEDA VF+++
Sbjct: 180 FSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMA 239
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
++V+SWN+++ G HG G V FE+M++ + PN +TFL VL+ACSH+GL + G
Sbjct: 240 SKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWE 299
Query: 318 YFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
F M + + ++P HY ++L+GR GLLD AL IR P +PTA +W ALL ACR++
Sbjct: 300 IFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVN 359
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
+N ELG +AAE+++ ++P +I+L NIY SAG L +AA +K G++ P CSW
Sbjct: 360 ENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSW 419
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
+E K H+F++ D+ HPQR I++K ++ +I + GYVP+ +L D+QE +L
Sbjct: 420 IEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRL- 478
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFR 556
HSEKLA+AF LISTP + + I + R+CGDCH A K ++V REI++RD RFHHF+
Sbjct: 479 YHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFK 538
Query: 557 DGFCSCGDYW 566
G CSC DYW
Sbjct: 539 HGHCSCEDYW 548
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 176/333 (52%), Gaps = 20/333 (6%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + R +HA L +DI + +++ Y+KCG +++AR +F+EMP K V W +
Sbjct: 89 LELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTI 148
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+GY+ + E A+ ++ +M G+K + FT S +++ A+ + +Q HA +++G
Sbjct: 149 IAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEH-AKQAHAALIRHG 207
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ ++ ++L+D Y+++ +++DA +F + SKN +SWNALI G+ G +A+ F
Sbjct: 208 FGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFE 267
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-----QLVAFVGNTLVDM 239
+M++E P H ++ +V +A + +G E+G W + +S G + A ++++
Sbjct: 268 QMIQERMNPNHITFLAVLSACSHSGLSERG-W---EIFQSMGRDNRIKPRAMHYACMIEL 323
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC---AQHGLGKATVRWFEKMLRNGIAPN 295
+ G +++A + K W ++LT C LGK EK+ G+ P+
Sbjct: 324 MGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFAA---EKLY--GMEPD 378
Query: 296 QV-TFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
++ ++ +L + AG L E +K+ G+
Sbjct: 379 KLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGL 411
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ A+ HA ++ F +DI +++ Y+K G +++AR +FD+M K++++W
Sbjct: 187 CARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISW 246
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI GY + + A+ LF QM++ + PN T +VL A ++
Sbjct: 247 NALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSER---------- 296
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
W +F ++ N + A+ + G + L
Sbjct: 297 --------------------------GWEIFQSMGRDNRIKPRAMHYACMIELMGREGLL 330
Query: 182 TFSEMLREG--FEPTHFSYSSVFTALASTGSLEQGKWVHAHVI-KSGGQLVAFVGNTLVD 238
+ L G F+PT ++++ TA + E GK+ + +L ++ L++
Sbjct: 331 DEALALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYI--VLLN 388
Query: 239 MYAKSGSIEDAEKVFNRLLK-----RDVVSW-------NSMLTGCAQHGLGKATVRWFEK 286
+Y +G++++A V + L + R V SW + L+G +H K + +K
Sbjct: 389 IYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDK 448
Query: 287 ML----RNGIAPNQVTFL 300
++ + G PNQ T L
Sbjct: 449 LMLEISKYGYVPNQKTLL 466
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 341/568 (60%), Gaps = 12/568 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
++++K + L F D + +++ ++KC +D AR LF + D+V++ AL
Sbjct: 217 MQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNAL 276
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ-----VHAF 119
ISG+S N + E A+ F ++L G + + T+ ++ S FG + F
Sbjct: 277 ISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSS------PFGHLHLACCIQGF 330
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
C+K G V ++L +Y+R +++D A LF K +WNA+I+G+A+ E A
Sbjct: 331 CVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMA 390
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM+ F P + +S+ +A A G+L GK VH + + +V L+DM
Sbjct: 391 ISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDM 450
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G+I +A ++F+ +++ V+WN+M+ G HG G ++ F +ML G P+ VTF
Sbjct: 451 YAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTF 510
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L VL ACSHAGL+ EG F A++ K+ +EP HY VD+LGRAG L++AL+FIR+MP
Sbjct: 511 LSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMP 570
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+EP AVWG LLGAC +HK+ L A+ER+FELDP + G ++LL+NIY+ AA
Sbjct: 571 VEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAAS 630
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ +K+ + K P C+ +E H+FV D +H Q I+ K E++ K++++GY +
Sbjct: 631 VREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSE 690
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ L +++E+E VHSEKLA+AF LI+T PG+ I I KN+RVC DCH+A KF SK
Sbjct: 691 TVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISK 750
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ ER I+VRD NRFHHF+DG CSCGDYW
Sbjct: 751 ITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 185/363 (50%), Gaps = 2/363 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HAH + F +++ + + +++ Y K + ARK+FD+MP +D V W +I+G +N
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++++ +F M+ G++ + T+++VL A A + K G + LK G+ ++ YV +
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAV-AEMQEVKVGMGIQCLALKLGFHFDDYVLT 243
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+ ++++ + +D A LF + + VS+NALI+G + E E A++ F E+L G
Sbjct: 244 GLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRV 303
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ + + + G L + +KSG L V L +Y++ I+ A ++F
Sbjct: 304 SSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLF 363
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ ++ V +WN+M++G AQ GL + + F++M+ PN VT +L+AC+ G L
Sbjct: 364 DESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALS 423
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ L+K +E +D+ + G + A + ++ E W ++
Sbjct: 424 FGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKNTVTWNTMIFGY 482
Query: 374 RMH 376
+H
Sbjct: 483 GLH 485
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 172/357 (48%), Gaps = 7/357 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA ++ + +++D+A + G AR LF +P D+ + LI G+S +
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDA 87
Query: 75 ENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++I ++ +L+ L P+ FT + + AS DD G +HA + G+D N++V S
Sbjct: 88 -SSISFYTHLLKNTTLSPDNFTYAFAISAS----PDDNLGMCLHAHAVVDGFDSNLFVAS 142
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D+Y +F ++ A +F + ++ V WN +I G R + +++ F +M+ +G
Sbjct: 143 ALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRL 202
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ ++V A+A ++ G + +K G +V L+ +++K ++ A +F
Sbjct: 203 DSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLF 262
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ K D+VS+N++++G + +G + V++F ++L +G + T + ++ S G L
Sbjct: 263 GMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 322
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
K G + + + R +D A + E E T A W A++
Sbjct: 323 LACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESS-EKTVAAWNAMI 378
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 3/207 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH I + +I + +++ YAKCG + EA +LFD K+ VTW
Sbjct: 416 CAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTW 475
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY + + A+ LF++ML LG +P+ T SVL A + HA
Sbjct: 476 NTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVN 535
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKAL 180
KY + + ++D+ R Q++ A F+ W L+ G +
Sbjct: 536 KYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLL-GACMIHKDTNLA 594
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALAS 207
R SE L E +P + Y + + + S
Sbjct: 595 RVASERLFE-LDPGNVGYYVLLSNIYS 620
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 350/564 (62%), Gaps = 9/564 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L++AR + + + D+ ++ YA G + ARK+FD + +D+V+W A+I+
Sbjct: 133 RLEDAR----KVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMIT 188
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY-GY 125
GY +N E A+ LF +M+R ++P++ TL SVL A A + + GR++H + G+
Sbjct: 189 GYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC-AQSGSIELGREIHTLVDDHHGF 247
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++ + ++ + +Y++ ++ A LF L K+ VSWN LI G+ + ++AL F E
Sbjct: 248 GSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQE 307
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKS 243
MLR G P + SV A A G+++ G+W+H ++ K G + + +L+DMYAK
Sbjct: 308 MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKC 367
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G IE A +VFN ++ + + SWN+M+ G A HG A F +M +NGI P+ +T + +L
Sbjct: 368 GDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLL 427
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ACSH+GLLD G+ F ++ + + + P+ HY +DLLG AGL A + I MP+EP
Sbjct: 428 SACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPD 487
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W +LL AC+MH N+EL A+++ E++P +SG ++LL+NIYA+AGR D AR R++
Sbjct: 488 GVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREV 547
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
+ G+KK P CS +E + VH F+ D HPQ I++ E+ +++ G+VPD+S V
Sbjct: 548 LNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEV 607
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L +++ +E L+ HSEKLA+AF LIST PG+ + + KN+RVC +CH A K SK+ +R
Sbjct: 608 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKR 667
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EI+ RD RFHHFRDG CSC DYW
Sbjct: 668 EIVARDRTRFHHFRDGVCSCCDYW 691
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 188/390 (48%), Gaps = 38/390 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ +++ W ++ G + + + + ++ +M+ G PN +T +LK+
Sbjct: 33 LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKS 92
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF---------- 152
T ++ GRQ+HA +K G + + Y +SL+ MYAR +++DA +F
Sbjct: 93 CAKSKTFEE-GRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVS 151
Query: 153 -TAL--------------------ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
TAL ++ VSWNA+I G+ E+AL F EM+R
Sbjct: 152 CTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNV 211
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSGSIEDAE 250
P + SV +A A +GS+E G+ +H V G + + N + +Y+K G +E A
Sbjct: 212 RPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIAS 271
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F L +DVVSWN+++ G L K + F++MLR+G +PN VT L VL AC+H G
Sbjct: 272 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG 331
Query: 311 LLDEGQGYFALMKKH--GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
+D G+ + K GV A + +D+ + G ++ A + M + + + W A
Sbjct: 332 AIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNA 390
Query: 369 LLGACRMH--KNVELGAYAAERIFELDPHD 396
++ MH N ++ R ++P D
Sbjct: 391 MIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 36/292 (12%)
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYA---RFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
HA +K G Y S LL++ FD + A +F + N + WN ++ G A
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
S+ L + M+ G P +++ + + A + + E+G+ +HA V+K G +L +
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 233 GNTLVDMYAKSGSIED-------------------------------AEKVFNRLLKRDV 261
+L+ MYA++G +ED A KVF+ + +RDV
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
VSWN+M+TG ++ + + F++M+R + P++ T + VL+AC+ +G ++ G+ L
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 322 MKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ HG F+ L + G ++ A + + + W L+G
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVS-WNTLIGG 291
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/611 (38%), Positives = 362/611 (59%), Gaps = 51/611 (8%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTIL--NAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
K +++ + +HA ++ +A D +L +A + LD ARK+F M + ++
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNT 81
Query: 64 LISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
LI S+++ P +A+++F +M+ ++PN FT SV KA G A + GRQVH +K
Sbjct: 82 LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGR-AERLREGRQVHGLAVK 140
Query: 123 YGYDWNVYVGSS----------------------------------------------LL 136
+G D + +V S+ ++
Sbjct: 141 FGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMI 200
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
D Y R +++ A LF + ++ VSWN +IAG+A+ ++A+ F EM P +
Sbjct: 201 DGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYV 260
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ SV A++ G+LE GKWVH + +++ + +G+ L+DMYAK GSIE A +VF L
Sbjct: 261 TLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGL 320
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
KR+VV+W++++ G A HG K T+ FE M R G+ P+ VT++ +L+ACSHAGL++EG+
Sbjct: 321 PKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGR 380
Query: 317 GYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+F +++ G+EP HY VDLLGRAGLL+ + + I MPI+P +W ALLGAC+M
Sbjct: 381 WFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKM 440
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H NVE+G AE + EL PHDSG ++ L+NIYAS G A+ R MMKE V+K+P CS
Sbjct: 441 HGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCS 500
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E +H F+ DD+HP+ IH +E+S + +GY P+++ VL+ D++++E+ L
Sbjct: 501 WIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSL 560
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEK+A+AF LIST P + + I KN+R+C DCHS+ K SK+ +R+IIVRD RFHHF
Sbjct: 561 NYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHF 620
Query: 556 RDGFCSCGDYW 566
+G CSC DYW
Sbjct: 621 VNGSCSCMDYW 631
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 149/324 (45%), Gaps = 53/324 (16%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE---------------- 45
C ++L+E R VH + +D + + ++ Y CG +++
Sbjct: 122 CGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDG 181
Query: 46 ------------------------------ARKLFDEMPVKDMVTWTALISGYSQNDQPE 75
AR LFDEMP + +V+W +I+GY+Q+ +
Sbjct: 182 IRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFK 241
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
A+ +F +M + PN TL SVL A S GA + G+ VH + ++ + +GS+
Sbjct: 242 EAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALE--LGKWVHLYAVRNNIGVDDVLGSA 299
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
L+DMYA+ ++ A +F L +N V+W+ +IAG A + L F +M R G P+
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSG-SIEDAEK 251
+Y + +A + G + +G+W H+++ G + G +VD+ ++G E E
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYG-CMVDLLGRAGLLEESEEL 418
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHG 275
+ N +K D V W ++L C HG
Sbjct: 419 ILNMPIKPDDVIWKALLGACKMHG 442
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/563 (41%), Positives = 333/563 (59%), Gaps = 37/563 (6%)
Query: 36 AYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT 95
+YA G LD + LF + WTA+I G++ E A+ ++QML G++PN FT
Sbjct: 18 SYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 77
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM 145
SS+LK + G+ +H+ +K G+D ++YV + LLD+YAR FD M
Sbjct: 78 FSSILKLCPI-----EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 146 ---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D A LF +E ++ V WN +I G+ + +AL F
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
ML+ +P + SV +A G+LE G+WVH+++ +G Q VG LVDMY+K G
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+EDA VF+++ +DVV+WNSM+ G A G + ++ F+ M R G+ P +TF+ +L+
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC H+G + EG F MK ++G+EP+ HY V+LLGRAG +++A + ++ M IEP
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+WG LLGACR+H + LG E + + + +SG +ILL+NIYA+ G + AR R MM
Sbjct: 373 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 432
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
K+SGVKKEP CS +E N VH F+A HP+R I+ EI+ +K GY P + VL
Sbjct: 433 KDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVL 492
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ E+E L+VHSEKLA+AF LI+T PG+TI I KN+RVC DCH K SK+ R+
Sbjct: 493 HDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRK 552
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I+VRD NRFHHF +G CSCGDYW
Sbjct: 553 IVVRDRNRFHHFVNGSCSCGDYW 575
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 165/302 (54%), Gaps = 8/302 (2%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L YAK G LD AR LFD M +D V W +I GY+QN P A++LF +ML+ KPN
Sbjct: 143 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 202
Query: 93 QFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFL 151
+ T+ SVL A G GA + GR VH++ G +NV+VG++L+DMY++ ++DA +
Sbjct: 203 EVTVLSVLSACGQLGALES--GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLV 260
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F ++ K+ V+WN++I G+A ++AL+ F M R G PT+ ++ + +A +G +
Sbjct: 261 FDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWV 320
Query: 212 EQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSML 268
+G W + +K + + + +V++ ++G +E A E V N ++ D V W ++L
Sbjct: 321 TEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 379
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
C HG + E ++ +A N T++ + + G D +MK GV+
Sbjct: 380 GACRLHGKIALGEKIVELLVDQNLA-NSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 438
Query: 329 PE 330
E
Sbjct: 439 KE 440
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VH++I + + ++ + +++ Y+KCG L++AR +FD++ KD+V W
Sbjct: 213 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 272
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY+ + A+ LF M R+GL P T +L A G + +
Sbjct: 273 NSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 332
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
+YG + + ++++ R ++ A+ L + + V W L+ H + + GE
Sbjct: 333 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 392
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALAS 207
K + + T+ S+++ A+ +
Sbjct: 393 KIVELLVDQ-NLANSGTYILLSNIYAAVGN 421
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 343/561 (61%), Gaps = 35/561 (6%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + R +H F+ ++ + ++++ Y++ G AR LFD+MP +DM +W A+ISG
Sbjct: 131 LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 190
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
QN A+ + +M G+K N T+ S+L
Sbjct: 191 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV------------------------- 225
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+DMYA+ +D A +F + K+ +SWN LI G+A+ +A+ + +M+
Sbjct: 226 -------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMM 277
Query: 188 REGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
E E P ++ S+ A A G+L+QG +H VIK+ L FV L+D+Y K G
Sbjct: 278 EECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGR 337
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ DA +F ++ + V+WN++++ HG + T++ F +ML G+ P+ VTF+ +L+A
Sbjct: 338 LVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 397
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
CSH+G ++EG+ F LM+++G++P HY VDLLGRAG L+ A FI++MP++P A++
Sbjct: 398 CSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASI 457
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGACR+H N+ELG +A++R+FE+D + G ++LL+NIYA+ G+ + R + +E
Sbjct: 458 WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARE 517
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G+KK P S +E V +F + +HP+ I+++ R ++ K+K +GY+PD S VL
Sbjct: 518 RGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQD 577
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++ E+E L HSE+LA+AF +ISTPP S I I KN+RVCGDCH+A KF S++ +REI+
Sbjct: 578 VEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIV 637
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD+NRFHHF+DG CSCGDYW
Sbjct: 638 VRDSNRFHHFKDGICSCGDYW 658
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 22/340 (6%)
Query: 107 ATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
+T F + +HA + G ++++ + L+++YA + + F + K+ +WN++
Sbjct: 29 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 88
Query: 167 IAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
I+ + +A+ F ++L P +++ V L + G+L G+ +H K G
Sbjct: 89 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV---LKACGTLVDGRKIHCWAFKLG 145
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
Q FV +L+ MY++ G A +F+ + RD+ SWN+M++G Q+G + +
Sbjct: 146 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 205
Query: 286 KMLRNGIAPNQVTFLCVLTAC----SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL 341
+M GI N VT + +L + GLLD F ++ V + T +
Sbjct: 206 EMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDV----ISWNTLITGY 261
Query: 342 GRAGLLDRALKFIREM----PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH-D 396
+ GL A++ + M I P W ++L A ++ G R+ + + H D
Sbjct: 262 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 321
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
L ++Y GRL DA M V +E + +W
Sbjct: 322 VFVATCLIDVYGKCGRLVDA-----MSLFYQVPQESSVTW 356
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
H+ L++ +H ++ + D+ + +++ Y KCG L +A LF ++P + VTW A
Sbjct: 299 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 358
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLK 122
+IS + + E + LF +ML G+KP+ T S+L A S +G ++ G+ +
Sbjct: 359 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE--GKWCFRLMQE 416
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIA 168
YG ++ ++D+ R ++ A+ + + + S W AL+
Sbjct: 417 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLG 463
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 344/564 (60%), Gaps = 4/564 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L + +HA+ + + F ++I + NT+++ YAKC C+ + FD M KD+++WT
Sbjct: 274 LGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTA 333
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
+GY+QN A+ L Q+ G+ + + S+L A K +++H + ++ G
Sbjct: 334 AAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKI-KEIHGYTIRGG 392
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
V + ++++D+Y +D A +F ++E K+ VSW ++I+ + KAL FS
Sbjct: 393 LSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFS 451
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M G EP + + S+ +A+ S +L++GK +H +I+ G L + NTLVDMYA+ G
Sbjct: 452 SMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCG 511
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+EDA K+F R+++ W +M++ HG G+A V F +M I P+ +TFL +L
Sbjct: 512 SVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLY 571
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+GL++EG+ + +MK ++ +EP HY VDLLGR L+ A + ++ M EPT
Sbjct: 572 ACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTP 631
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
VW ALLGACR+H N E+G AAE++ ELD + G ++L++N++A+ GR D R M
Sbjct: 632 EVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRM 691
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIGYVPDSSHV 482
K SG+ K P CSW+E N +H F++ D HP+ I++K +++EK+K + GYV + V
Sbjct: 692 KGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFV 751
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L ++E+ L HSE+LA+A+ L++T G+ I + KN+RVCGDCHS S+ ER
Sbjct: 752 LHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFER 811
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
E+IVRD +RFHHF+DG CSCGD+W
Sbjct: 812 ELIVRDASRFHHFKDGMCSCGDFW 835
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 206/399 (51%), Gaps = 18/399 (4%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVK-DMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
N+++ YAKC ++ ARKLFD M V+ D+V+W ++IS YS N A+ LFS+ML+ G+
Sbjct: 97 NSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGV 156
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
N +T ++ L+A ++ K G Q+HA LK G +VYV ++L+ MY RF +M +A
Sbjct: 157 VTNTYTFAAALQAC-EDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAA 215
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F LE K+ V+WN+++ G + +AL F ++ +P S S+ A G
Sbjct: 216 VIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLG 275
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L GK +HA+ IK+G VGNTL+DMYAK + + F+ + +D++SW +
Sbjct: 276 YLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAA 335
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC---SHAGLLDEGQGYFALMKKHG 326
G AQ+ + ++ G+ + +L AC + G + E GY G
Sbjct: 336 GYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGY----TIRG 391
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK---NVELGA 383
+ T +D+ G G++D A++ + + + W +++ +C +H N L
Sbjct: 392 GLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVS-WTSMI-SCYVHNGLANKALEV 449
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+++ + L+P ++ L +I ++ L+ + +++
Sbjct: 450 FSSMKETGLEP----DYVTLVSILSAVCSLSTLKKGKEI 484
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 253/555 (45%), Gaps = 71/555 (12%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y KCG + +A +FD+M + + TW A++ GY N + A+ ++ +M LG+ + +T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 97 SSVLKASGAGATDDKF-GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
+LKA G +D F G ++H +KYG D V+V +SL+ +YA+ + ++ A LF +
Sbjct: 62 PVLLKA--CGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 156 ESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+N+ VSWN++I+ ++ +AL FSEML+ G +++++ A + ++ G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+HA ++KSG L +V N LV MY + G + +A +F L +D+V+WNSMLTG Q+
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
GL + +F + + P+QV+ + ++ A G L G+ A K+G +
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 335 VTFVDLLGRAGLLD-------------------------------RALKFIREMPIEPT- 362
T +D+ + + +AL+ +R++ +E
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 363 --AAVWGALLGACR----MHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
A + G++L ACR + K E+ Y DP I ++Y G ++ A
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTII---DVYGECGIIDYA 415
Query: 417 ARARKMMKESGVKKEPACSWVETKNA-VHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R + ++ + SW + VH +AN K E+ +K+ G
Sbjct: 416 VRIFE-----SIECKDVVSWTSMISCYVHNGLAN------------KALEVFSSMKETGL 458
Query: 476 VPDSSHVLSYADQQEREAKL----QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
PD ++S + L ++H + F L + + + + CG
Sbjct: 459 EPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYAR---CGSVED 515
Query: 532 AFKFASKVVEREIIV 546
A+K + R +I+
Sbjct: 516 AYKIFTCTKNRNLIL 530
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 209/428 (48%), Gaps = 12/428 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +K +HA IL S D+ + N ++ Y + G + EA +F + KD+VTW
Sbjct: 170 CEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTW 229
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
++++G+ QN A+ F + LKP+Q ++ S++ ASG G + G+++HA+
Sbjct: 230 NSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLN--GKEIHAYA 287
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G+D N+ VG++L+DMYA+ M F + K+ +SW AG+A+ +AL
Sbjct: 288 IKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQAL 347
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
++ EG + S+ A L + K +H + I+ GG + NT++D+Y
Sbjct: 348 ELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIR-GGLSDPVLQNTIIDVY 406
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G I+ A ++F + +DVVSW SM++ +GL + F M G+ P+ VT +
Sbjct: 407 GECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLV 466
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A L +G+ + + G E + T VD+ R G ++ A K I
Sbjct: 467 SILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYK-IFTCTKN 525
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HI-LLANIYAS--AGRLNDA 416
+W A++ A MH G A E + P HI LA +YA +G +N+
Sbjct: 526 RNLILWTAMISAYGMHG---YGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEG 582
Query: 417 ARARKMMK 424
++MK
Sbjct: 583 KSFLEIMK 590
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 22/286 (7%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY + + DA +F + ++ +WNA++ G+ E AL + EM G ++
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL- 256
+ + A L G +H IK G FV N+LV +YAK I A K+F+R+
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
++ DVVSWNS+++ + +G+ + F +ML+ G+ N TF L AC + + G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
A + K G +D+ L+ ++F +MP A ++G L G +
Sbjct: 181 QIHAAILKSG---------RVLDVYVANALVAMYVRF-GKMP--EAAVIFGNLEGKDIVT 228
Query: 377 KNVELGAY--------AAERIFELDPHDSGP-HILLANIYASAGRL 413
N L + A E ++L D P + + +I ++GRL
Sbjct: 229 WNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRL 274
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/553 (40%), Positives = 335/553 (60%), Gaps = 1/553 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H F +++ +QN++++ YAK G + AR +FD++ + +V+WT++ISGY QN
Sbjct: 122 IHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGD 181
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P A+ +F +M + +KP+ L SV+ A D G+ +H K G ++ +
Sbjct: 182 PMEALNVFKEMRQCNVKPDWIALVSVMTAY-TNVEDLGQGKSIHGLVTKLGLEFEPDIVI 240
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL MYA+ ++ A F F +E N + WNA+I+G+A GE+A++ F EM+ +
Sbjct: 241 SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRV 300
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ S A A GSLE +W+ ++ KS + FV L+DMYAK GSI A VF
Sbjct: 301 DSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVF 360
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+R+ +DVV W+ M+ G HG G+ + + +M + G+ PN TF+ +LTAC ++GL+
Sbjct: 361 DRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVK 420
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
EG F LM HG+EP HY VDLLGRAG L++A FI MPI+P +VWGALL AC
Sbjct: 421 EGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC 480
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
++H+ V LG AAE++F LDP+++G ++ L+N+YASA A R MM + G+ K+
Sbjct: 481 KIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLG 540
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
S +E + F D +HP+ I ++ + +++K GYVP VL + +E E
Sbjct: 541 HSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEE 600
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSE+LA+A+ +IST PG+T+ I KN+R C +CHSA K SK+V+REII+RD RFH
Sbjct: 601 TLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFH 660
Query: 554 HFRDGFCSCGDYW 566
HF+DG CSCGD+W
Sbjct: 661 HFKDGVCSCGDFW 673
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 205/424 (48%), Gaps = 5/424 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
LK V+ ++ S + +NA G ++ A K F E+ D++ W A+I G
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q + + I ++ M + PN FT VLKA G G + + G+Q+H KYG+
Sbjct: 75 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG-GTSVEGIGKQIHGQTFKYGFGS 133
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV+V +SL+ MYA+F Q+ A +F L + VSW ++I+G+ + + +AL F EM
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ +P + SV TA + L QGK +H V K G + + +L MYAK G +E
Sbjct: 194 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 253
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A FNR+ K +++ WN+M++G A +G G+ ++ F +M+ I + +T + A +
Sbjct: 254 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASA 313
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
G L+ + + K + +D+ + G + A + + + + +W
Sbjct: 314 QVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA-RCVFDRVADKDVVLWS 372
Query: 368 ALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
++ +H + + + Y + + P+D G I L ++G + + +M +
Sbjct: 373 VMIMGYGLHGHGQEAICLYNEMKQAGVCPND-GTFIGLLTACKNSGLVKEGWELFHLMPD 431
Query: 426 SGVK 429
G++
Sbjct: 432 HGIE 435
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 147/281 (52%), Gaps = 18/281 (6%)
Query: 3 THLKKLKEARIVHAHI--LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
T+++ L + + +H + LG F+ DI + T + YAK G ++ AR F+ M +++
Sbjct: 212 TNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM--YAKRGLVEVARFFFNRMEKPNLIL 269
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL-SSVLKASGAGATDDKFGRQVHAF 119
W A+ISGY+ N E AI LF +M+ ++ + T+ S+VL ++ G+ + R + +
Sbjct: 270 WNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE--LARWLDGY 327
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K Y + +V + L+DMYA+ + A +F + K+ V W+ +I G+ G++A
Sbjct: 328 ISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEA 387
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-----QLVAFVGN 234
+ ++EM + G P ++ + TA ++G +++G W H++ G Q + V
Sbjct: 388 ICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG-WELFHLMPDHGIEPHHQHYSCV-- 444
Query: 235 TLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
VD+ ++G + A + + + +K V W ++L+ C H
Sbjct: 445 --VDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/596 (38%), Positives = 341/596 (57%), Gaps = 32/596 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L V A+I K + M N +++ Y KCG +D A++LFDE +++V +
Sbjct: 242 CAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLY 301
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++S Y++ A+ + +ML+ G +P++ T+ S + AS A D +G+ H + +
Sbjct: 302 NTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISAS-AQLVDLFYGKVCHGYVI 360
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
+ G + +G+ ++DMY + FD M + AW
Sbjct: 361 RNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWE 420
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + +N V WN +I+G +KS E A+ F EM EG + + + +A G+
Sbjct: 421 VFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGA 480
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
E KWVH ++ K+G + LVDM+A+ G + A +VFN++ +RDV +W + +
Sbjct: 481 PELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGT 540
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A G G+ F +ML G+ P+ V F+ VLTACSH G +++G F+LM+ HG+ P+
Sbjct: 541 MAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQ 600
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY VDLLGRAGLL A I+ MP+EP VWG+LL ACR+HKNVE+ YAAERI
Sbjct: 601 IEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERIN 660
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
EL P +G H+LL+NIYASAG+ D AR R ++E GV+K P S V+ +H F + D
Sbjct: 661 ELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGD 720
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
++HP+ I +E++ + G++PD S+VL D+QE+E L HSEKLA+AF LI+
Sbjct: 721 ESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIA 780
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
T I + KN+R+C DCHS K AS + REIIVRD NRFH FR G CSC DYW
Sbjct: 781 TGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 205/410 (50%), Gaps = 33/410 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + E VH ++ + D+ +QN +++ YA+CG +D K+F+ M +++V+W
Sbjct: 141 CTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI GY++ D+P+ A+ LF +M+ G++P+ T+ V+ A A D G +V A+
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISAC-AKLRDLDMGERVCAYIG 259
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N + ++L+DMY + +D A LF +N V +N +++ +AR+ +AL
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EML++G P + S +A A L GK H +VI++G + +GN ++DMY
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYM 379
Query: 242 K-------------------------------SGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
K +G +E A +VFN++ +R+ V WN+M++G
Sbjct: 380 KCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q L + + F +M GI ++VT + + +AC + G + + ++K+G+ +
Sbjct: 440 LVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD 499
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
VD+ R G A++ +M E + W A +G M N E
Sbjct: 500 MRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGE 548
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 193/387 (49%), Gaps = 13/387 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC---LDEARK---LFDEMPV 55
C L +LK+ +H I + + ++NA A+ LD ARK LF E
Sbjct: 35 CKTLNQLKQ---LHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91
Query: 56 KD--MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 113
D + +LI GYS AI+L+ +ML LG+ PN +T VL A + G
Sbjct: 92 SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCE-G 150
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
QVH +K G + +V++ + L+ YA MD +F + +N VSW +LI G+AR
Sbjct: 151 IQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARG 210
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
++A+ F EM+ G P+ + V +A A L+ G+ V A++ + G +L +
Sbjct: 211 DRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV 270
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N LVDMY K G+I+ A+++F+ + R++V +N++L+ A+ GL + + ++ML+ G
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P++VT L ++A + L G+ + ++G+E ++ +D+ + G + A +
Sbjct: 331 PDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRV 390
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVE 380
M T W +L + +VE
Sbjct: 391 FDLMS-NKTVVSWNSLTAGFIRNGDVE 416
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/558 (39%), Positives = 339/558 (60%), Gaps = 3/558 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H ++ S N + + ++++Y + GC +A +LFDE+P KD+V+W +LISG+S+
Sbjct: 57 CRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSR 116
Query: 71 NDQPENAI-ILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+ +LF +GLKPN+ T+ V+ A AG + G+ +H +K G V
Sbjct: 117 RADLGICLGLLFRMRFEMGLKPNEVTVIPVVSAC-AGVGELDVGKCIHGIAVKSGMLLEV 175
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
V +SL+++Y + ++ A LF + ++ VSWN+++A H EK + F M R
Sbjct: 176 KVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRA 235
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G + S+ A + G + + VH +++ G + L+D+YAK G++ D+
Sbjct: 236 GINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDS 295
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
KVF ++ D V+W +ML+ A HG G+ + FE M+R G+ P+ VTF +L+ACSH+
Sbjct: 296 CKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHS 355
Query: 310 GLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL++EG+ YF +M + +GVE HY VDLLGR+G L+ A K I+ MP+EP + VWGA
Sbjct: 356 GLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGA 415
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
L+GACR+ N+ELG AER+F LDP DS +I L+N+Y++AG+ DA++ R +MKE +
Sbjct: 416 LIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVL 475
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
+ P CS++E N +H FV D +HP I+ K E+ K +++G+ + +VL D+
Sbjct: 476 IRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDE 535
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+ +E + HSEKLA+AF L+ T G + I KNIR+CGDCH K S + +R II+RD
Sbjct: 536 EVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRD 595
Query: 549 TNRFHHFRDGFCSCGDYW 566
T RFHHF +G CSCGDYW
Sbjct: 596 TKRFHHFTNGLCSCGDYW 613
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 147/282 (52%), Gaps = 6/282 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +L + +H + S ++ + N+++N Y KCGCL+ A LF+ M V+ +V+W
Sbjct: 150 CAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSW 209
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ + E I F M R G+ +Q T+ S+L A K VH + L
Sbjct: 210 NSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLAC-ENLGVRKLAEAVHGYIL 268
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G D N+ + ++LLD+YA+ + D+ +F + + + V+W A+++ +A G +A+
Sbjct: 269 NGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIE 328
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMY 240
F M+REG P H +++ + +A + +G +E+GK + G +L + +VD+
Sbjct: 329 HFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLL 388
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGK 278
+SG + DA K+ + ++ + W +++ C G LGK
Sbjct: 389 GRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGK 430
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 191 FEPTHFSYSSV-------FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
PT ++S+V TA+++ S+ + +H VIKS F+G+ LV Y +
Sbjct: 27 LSPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVEL 86
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +DA ++F+ L +D+VSWNS+++G ++ LG F G+ PN+VT + V
Sbjct: 87 GCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPV 146
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
++AC+ G LD G+ + K G+ E + ++L G+ G L+ A M ++
Sbjct: 147 VSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSL 206
Query: 363 AAVWGALL 370
+ W +++
Sbjct: 207 VS-WNSMV 213
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/599 (37%), Positives = 357/599 (59%), Gaps = 35/599 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA--------------- 46
C K L E + +H H+L + D+ + ++++ YA+ G L++A
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 47 ----------------RKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
RKLFDE+ VKD+V+W A+ISGY + + A+ L+ M++ +K
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+ +V+ A + + GRQ+H++ +G+ N+ + + L+D+Y++ +++ A
Sbjct: 195 PDESTMVTVVSACAQSGSIE-LGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF L K+ +SWN LI GH + ++AL F EMLR G P + SV A A G+
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 211 LEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
++ G+W+H ++ K G + + +L+DMYAK G IE A++VF+ +L R + SWN+M+
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGV 327
G A HG A F KM +NGI P+ +TF+ +L+ACSH+G+LD G+ F M + + +
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKI 433
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY +DLLG GL A + IR MP+EP +W +LL AC+MH NVELG A+
Sbjct: 434 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQ 493
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
+ +++P + G ++LL+NIYA+AGR + A+ R ++ + G+KK P CS +E + VH F+
Sbjct: 494 NLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFI 553
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D HP+ I++ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA+AF
Sbjct: 554 IGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 613
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+ + I KN+RVC +CH A K SK+ +REII RD R H +DG SC DYW
Sbjct: 614 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 196/389 (50%), Gaps = 37/389 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ + +++ W + G++ N A+ L+ M+ LGL PN ++ +LK
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLK- 73
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQ-------- 144
S A + G+Q+H LK GYD ++YV +SL+ MYA+ FD+
Sbjct: 74 SCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133
Query: 145 -------------MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+++A LF + K+ VSWNA+I+G+ ++AL + +M++
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P + +V +A A +GS+E G+ +H+ + G + N L+D+Y+K G +E A
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L K+DV+SWN+++ G L K + F++MLR+G +PN VT L VL AC+H G
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 312 LDEGQGYFALMKKH--GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+D G+ + K GV + + +D+ + G ++ A + M + + + W A+
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSWNAM 372
Query: 370 LGACRMH--KNVELGAYAAERIFELDPHD 396
+ MH N ++ R +DP D
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDD 401
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 32/262 (12%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
FD + A +F ++ N + WN + GHA S+ AL+ + M+ G P +S+ +
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR------ 255
+ A + +L +G+ +H HV+K G L +V +L+ MYA++G +EDA KVF+R
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 256 -------------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ +DVVSWN+M++G + K + ++ M++
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ P++ T + V++AC+ +G ++ G+ + ++ HG +DL + G ++ A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
+ + + + W L+G
Sbjct: 252 CGLFQGLAKKDVIS-WNTLIGG 272
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 362/614 (58%), Gaps = 51/614 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VH + + +D+ + N +++ YAKC ++EA K+F+ + KD+V+W
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSW 303
Query: 62 TALISGYSQNDQPENAIILFS-----------------------------------QMLR 86
A+++GYSQ ++A+ LF QM
Sbjct: 304 NAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQL 363
Query: 87 LGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLK--YGYDWN-----VYVGSSLLDM 138
GL+PN TL+S+L + GA +G+Q HA+ +K +WN + V + L+DM
Sbjct: 364 YGLEPNVVTLASLLSGCASVGAL--LYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDM 421
Query: 139 YARFDQMDDAWFLFTALESK--NEVSWNALIAGHARKSEGEKALRTFSEMLRE--GFEPT 194
YA+ A +F ++E K N V+W +I G+A+ E AL+ F+++ ++ +P
Sbjct: 422 YAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPN 481
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMYAKSGSIEDAEKVF 253
F+ S A A G L G+ +HA+ +++ + V +VGN L+DMY+KSG I+ A VF
Sbjct: 482 AFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVF 541
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + R+VVSW S++TG HG G+ + F++M + G A + +TFL VL ACSH+G++D
Sbjct: 542 DNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVD 601
Query: 314 EGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G YF ++K G+ P HY VDLLGRAG L+ A++ I+ M +EPTA VW ALL A
Sbjct: 602 QGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSA 661
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
R+H N+ELG YAA ++ EL + G + LL+N+YA+A R D AR R +MK +G++K P
Sbjct: 662 SRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRP 721
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CSW++ K + F D +HP+ I+ ++ ++IK +GYVP +S L D +E+
Sbjct: 722 GCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKG 781
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+A+ +++T PG I I KN+R+CGDCHSA + S +++ EI++RD++RF
Sbjct: 782 DLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRF 841
Query: 553 HHFRDGFCSCGDYW 566
HHF+ G CSC YW
Sbjct: 842 HHFKKGSCSCRSYW 855
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 57/433 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM---PVKDM 58
C + L+ VHA + + +++ + N+I+ Y +CG LD+A ++FDE+ ++D+
Sbjct: 137 CGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDI 196
Query: 59 VTWTALISGYSQNDQPENAIILFSQM---LRLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
V+W ++++ Y Q Q A+ + +M L L+P+ TL ++L A A + G+Q
Sbjct: 197 VSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPAC-ASVFALQHGKQ 255
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL--------- 166
VH F ++ G +V+VG++L+ MYA+ +M++A +F ++ K+ VSWNA+
Sbjct: 256 VHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGS 315
Query: 167 --------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
IAG+A+K G +AL F +M G EP + +S
Sbjct: 316 FDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLAS 375
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLV-------AFVGNTLVDMYAKSGSIEDAEKVF 253
+ + AS G+L GK HA+VIK+ L V N L+DMYAK S A +F
Sbjct: 376 LLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIF 435
Query: 254 NRLLKRD--VVSWNSMLTGCAQHGLGKATVRWFEKML--RNGIAPNQVTFLCVLTACSHA 309
+ + +D VV+W M+ G AQHG ++ F ++ + + PN T C L AC+
Sbjct: 436 DSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARL 495
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
G L G+ A ++ E E YV +D+ ++G +D A M + + W
Sbjct: 496 GELRLGRQLHAYALRNENE-SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVS-WT 553
Query: 368 ALLGACRMHKNVE 380
+L+ MH E
Sbjct: 554 SLMTGYGMHGRGE 566
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 185/408 (45%), Gaps = 40/408 (9%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTW-TA 63
K L A++ H I F M + + AY +CG EA L + P V W A
Sbjct: 41 KTLINAKLAHQQIFVHGFTE---MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNA 97
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LI + ++ + + QM RLG P+ +T VLKA G + G VHA
Sbjct: 98 LIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGE-IPSLRHGASVHAIVCAN 156
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFT-ALESKNE--VSWNALIAGHARKSEGEKAL 180
G NV++ +S++ MY R +DDA +F LE K E VSWN+++A + + + AL
Sbjct: 157 GLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTAL 216
Query: 181 RTFSEM---LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
R M P + ++ A AS +L+ GK VH +++G FVGN LV
Sbjct: 217 RIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALV 276
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MYAK + +A KVF + K+DVVSWN+M+TG +Q G + + F+ M I + +
Sbjct: 277 SMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVI 336
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T+ V+ + G E F M+ +G+EP + VT LL
Sbjct: 337 TWSAVIAGYAQKGHGFEALDVFRQMQLYGLEP---NVVTLASLL---------------- 377
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLAN 405
A GALL + H AY + I L+ +D +L+ N
Sbjct: 378 ---SGCASVGALLYGKQTH------AYVIKNILNLNWNDKEDDLLVLN 416
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 343/544 (63%), Gaps = 4/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ ++ YA G + A+KLFDE+PVKD+V+W A+ISGY++ + A+ LF +M+
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
++ ++P++ T +VL A A + + GRQVH++ +G+D N+ + ++L+D+Y++ ++
Sbjct: 189 KMNVRPDESTYVTVLSAC-AHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV 247
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A LF L K+ +SWN LI G+ + ++AL F EMLR G P + SV A
Sbjct: 248 ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPAC 307
Query: 206 ASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A G+++ G+W+H ++ K G + + +L+DMYAK G IE A +VFN +L + + S
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 367
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALM 322
WN+M+ G A HG A+ F +M + GI P+ +TF+ +L+ACSH+G+LD G+ F ++
Sbjct: 368 WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 427
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ + + P+ HY +DLLG +GL A + I M +EP +W +LL AC+MH NVEL
Sbjct: 428 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELA 487
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A+ + +++P + +ILL+NIYASAGR D AR R ++ +KK P CS +E +
Sbjct: 488 ESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSV 547
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
V FV D HPQ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKL
Sbjct: 548 VFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 607
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF LIST PG+ + I KN+RVC +CH A K SK+ +REI+ RD RFHHFRDG CSC
Sbjct: 608 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSC 667
Query: 563 GDYW 566
DYW
Sbjct: 668 NDYW 671
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 37/389 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ + + + W +I G++ + P +++ L+ M+ LGL PN +T +LK+
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW------------- 149
T + G+Q+H LK G+D ++YV +SL+ MY + +++DA+
Sbjct: 74 CAKSKTFTE-GQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVS 132
Query: 150 ------------------FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
LF + K+ VSWNA+I+G+A ++AL F EM++
Sbjct: 133 YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P +Y +V +A A +GS+E G+ VH+ V G + N L+D+Y+K G +E A
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L +DV+SWN+++ G L K + F++MLR+G PN VT L VL AC+H G
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 312 LDEGQGYFALMKKH--GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+D G+ + K GV + + +D+ + G ++ A + M + + + W A+
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAM 371
Query: 370 LGACRMH--KNVELGAYAAERIFELDPHD 396
+ MH + ++ R ++P D
Sbjct: 372 IFGFAMHGRADASFDLFSRMRKIGIEPDD 400
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 148/283 (52%), Gaps = 15/283 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H ++ R VH+ + F +++ + N +++ Y+KCG ++ A LF + KD+++W
Sbjct: 206 CAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISW 265
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
LI GY+ + + A++LF +MLR G PN T+ SVL A GA D GR +H +
Sbjct: 266 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID--IGRWIHVYI 323
Query: 121 LKY--GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G + +SL+DMYA+ ++ A +F ++ K+ SWNA+I G A +
Sbjct: 324 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADA 383
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN---- 234
+ FS M + G EP ++ + +A + +G L+ G+ H+ +S Q
Sbjct: 384 SFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMTQDYKMTPKLEHY 439
Query: 235 -TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++D+ SG ++AE++ N + ++ D V W S+L C HG
Sbjct: 440 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 128/262 (48%), Gaps = 32/262 (12%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
FD + A +F ++ N++ WN +I GHA S+ +L + M+ G P +++ +
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR------ 255
+ A + + +G+ +H V+K G L +V +L+ MY ++ +EDA KVF+R
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 256 -------------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ +DVVSWN+M++G A+ G K + FE+M++
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ P++ T++ VL+AC+H+G ++ G+ + + HG + +DL + G ++ A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
+ + + + W L+G
Sbjct: 251 CGLFQGLSYKDVIS-WNTLIGG 271
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/571 (39%), Positives = 342/571 (59%), Gaps = 10/571 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTI--LNAYAKCGCLDEARKLFDEMPVKDM 58
KCT L++LK+ + A+ + + N + I + +D A ++FD++P D+
Sbjct: 44 KCTSLRELKQ---IQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDI 100
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
V + + GY++ D P AI+L SQ+L GL P+ +T SS+LKA ++ G+Q+H
Sbjct: 101 VLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEE-GKQLHC 159
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G N+YV +L++MY + +D A +F + V++NA+I AR S +
Sbjct: 160 LAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNE 219
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F E+ G +PT + ++ A G+L+ G+W+H +V K+G V L+D
Sbjct: 220 ALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALID 279
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK GS++DA VF + +RD +W++M+ A HG G + +M + + P+++T
Sbjct: 280 MYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEIT 339
Query: 299 FLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
FL +L ACSH GL++EG YF ++ ++G+ P HY +DLLGRAG L+ A KFI E+
Sbjct: 340 FLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDEL 399
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI+PT +W LL +C H NVE+ +RIFELD G +++L+N+ A GR +D
Sbjct: 400 PIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVN 459
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
RKMM + G K P CS +E N VH F + D H ++H E+ +++K GYVP
Sbjct: 460 HLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVP 519
Query: 478 DSSHVLSYAD--QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
D+S V YAD +E+E L+ HSEKLA+ + L++TPPG+TI + KN+RVC DCH+A KF
Sbjct: 520 DTSLVF-YADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKF 578
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + R+II+RD RFHHF+DG CSCGDYW
Sbjct: 579 ISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/566 (42%), Positives = 339/566 (59%), Gaps = 11/566 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV---KDMVTWTALISG 67
R +H ++ ++ N +L Y++ G L EAR++F EM +D V+W A+I
Sbjct: 158 VRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVA 217
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Q+ + A+ LF +M+R GLK + FT++SVL A D GRQ H +K G+
Sbjct: 218 CGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTC-VKDLVGGRQFHGMMIKSGFHG 276
Query: 128 NVYVGSSLLDMYARF-DQMDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKALRTFSE 185
N +VGS L+D+Y++ M + +F + + + V WN +I+G + + E L F E
Sbjct: 277 NSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFRE 336
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSG 244
M R GF P S+ V +A ++ S GK VHA IKS V N LV MY+K G
Sbjct: 337 MQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCG 396
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ DA +VF+ + + + VS NSM+ G AQHG+ ++R FE ML IAPN +TF+ VL+
Sbjct: 397 NVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLS 456
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC H G ++EGQ YF +MK + +EPE HY +DLLGRAG L A + I MP P +
Sbjct: 457 ACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGS 516
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
W LLGACR H NVEL AA L+P+++ P+++L+N+YASA R +AA +++M
Sbjct: 517 IEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLM 576
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+E GVKK+P CSW+E VH+FVA D +HP IH ++ +K+KQ GYVPD L
Sbjct: 577 RERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWAL 636
Query: 484 ---SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ ERE +L HSEKLA+AF LIST G I + KN+R+CGDCH+A K S +
Sbjct: 637 VKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALT 696
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI VRDT+RFH F++G CSC DYW
Sbjct: 697 GREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 206/406 (50%), Gaps = 19/406 (4%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT++NAYAK + AR++FDE+P D+V++ LI+ Y+ + + LF ++ L L
Sbjct: 79 NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS V+ A G D RQ+H F + G+D V +++L Y+R + +A
Sbjct: 139 LDGFTLSGVITACG---DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARR 195
Query: 151 LFTALES---KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + ++EVSWNA+I + EG +A+ F EM+R G + F+ +SV TA
Sbjct: 196 VFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTC 255
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNS 266
L G+ H +IKSG + VG+ L+D+Y+K +GS+ + KVF + D+V WN+
Sbjct: 256 VKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNT 315
Query: 267 MLTGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
M++G + + L + + F +M RNG P+ +F+CV +ACS+ G+ AL K
Sbjct: 316 MISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKS 375
Query: 326 GVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
V V + + G + A + MP T ++ + G + VE
Sbjct: 376 DVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVE---- 431
Query: 385 AAERIFELD-PHDSGPH----ILLANIYASAGRLNDAARARKMMKE 425
+ R+FEL D P+ I + + G++ + + MMKE
Sbjct: 432 -SLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 11/258 (4%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM- 186
NV+ ++L++ YA+ + A +F + + VS+N LIA +A + E LR F E+
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 187 -LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
LR G + F+ S V TA L + +H V+ G A V N ++ Y++ G
Sbjct: 134 ELRLGLDG--FTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGF 189
Query: 246 IEDAEKVFNRLLK---RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
+ +A +VF + + RD VSWN+M+ C QH G V F +M+R G+ + T V
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASV 249
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR-AGLLDRALKFIREMPIEP 361
LTA + L G+ + +M K G +DL + AG + K E+ P
Sbjct: 250 LTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI-TAP 308
Query: 362 TAAVWGALLGACRMHKNV 379
+W ++ +++++
Sbjct: 309 DLVLWNTMISGFSLYEDL 326
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 35/214 (16%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE------ 250
++ ++ A + L GK +HA KS ++ N +Y+K GS+ +A+
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 251 -------------------------KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+VF+ + + D+VS+N+++ A G T+R FE
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
++ + + T V+TAC L F ++ H + V + R G
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAV--LACYSRKG 188
Query: 346 LLDRALKFIREMPI--EPTAAVWGALLGACRMHK 377
L A + REM W A++ AC H+
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 340/544 (62%), Gaps = 4/544 (0%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+D+ + +++ Y+KCG + R LFD++ D++++ A+ISGY+ N + E+A+ LF ++
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL 306
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
L G + N TL ++ + R + LK G V ++L +Y R ++
Sbjct: 307 LASGQRVNSSTLVGLIPVY-LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A LF K+ SWNA+I+G+ + ++A+ F EM+ + P + +S+ +A
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSA 424
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A G+L GKWVH + + +V LVDMYAK GSI +A ++F+ ++ ++VV+W
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMK 323
N+M+TG HG GK ++ F +ML++GI P VTFL +L ACSH+GL+ EG F ++
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+G +P HY VD+LGRAG L AL+FI MP+EP AVWGALLGAC +HKN E+
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMAN 604
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
A++R+F+LDP + G ++LL+NIY++ AA R+++K+ + K P C+ +E +
Sbjct: 605 VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQ 664
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS-SHVLSYADQQEREAKLQVHSEKL 502
++F + D +HPQ I + +++ K+++ GY ++ + L + +E+E + VHSEKL
Sbjct: 665 YVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKL 724
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF LIST PG+ I I KN+RVC DCH+A KF SK+ ER I+VRD NRFHHF++G CSC
Sbjct: 725 AIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSC 784
Query: 563 GDYW 566
GDYW
Sbjct: 785 GDYW 788
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 186/373 (49%), Gaps = 6/373 (1%)
Query: 7 KLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L++ R+ +HAH + +++ + + I++ Y K + ARK+FD MP +D V W
Sbjct: 125 RLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNT 184
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+ISG+S+N E++I +F ML +GL + TL++VL A A + + G + K
Sbjct: 185 MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV-AELQEYRLGMGIQCLASKK 243
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +VYV + L+ +Y++ + LF ++ + +S+NA+I+G+ E E A+ F
Sbjct: 244 GLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF 303
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
E+L G + + L+ + + +K G L V L +Y +
Sbjct: 304 RELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
++ A ++F+ ++ + SWN+M++G Q+GL + F++M+ ++PN VT +L
Sbjct: 364 NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSIL 422
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
+AC+ G L G+ L+K +E VD+ + G + A + ++ ++
Sbjct: 423 SACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKNV 481
Query: 364 AVWGALLGACRMH 376
W A++ +H
Sbjct: 482 VTWNAMITGYGLH 494
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 207/454 (45%), Gaps = 44/454 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+ A ++ D++ + + + G + R+LF+++ D+ + LI G+S N
Sbjct: 33 IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL 92
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
P+++I L++ + + L+P+ FT + + A+ + D++ G +HA + G N++VG
Sbjct: 93 PKSSIFLYTHLRKKTNLRPDNFTYAFAISAA-SRLEDERVGVLLHAHSIVDGVASNLFVG 151
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+++D+Y +F + + A +F + ++ V WN +I+G +R S E ++R F +ML G
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+ ++V TA+A G + K G +V L+ +Y+K G +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+++ + D++S+N+M++G + ++ V F ++L +G N T + ++ L
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 313 DEGQGYFALMKKHGV-----------------------------EPEE--AHYVTFVDLL 341
+ L K G+ PE+ A + +
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGY 391
Query: 342 GRAGLLDRALKFIREM--PIEPTAAVWGALLGACRMHKNVELGAYA-----AERIFELDP 394
+ GL DRA+ +EM + P ++L AC + +G + +ER+ E +
Sbjct: 392 TQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERL-ESNV 450
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ S L ++YA G + +A + +M + V
Sbjct: 451 YVSTA---LVDMYAKCGSIVEARQLFDLMVDKNV 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH I ++++ + +++ YAKCG + EAR+LFD M K++VTW
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY + + A+ LF +ML+ G+ P T S+L A + H+
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG+ + ++D+ R Q+ +A
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNA 571
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 340/544 (62%), Gaps = 4/544 (0%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+D+ + +++ Y+KCG + R LFD++ D++++ A+ISGY+ N + E+A+ LF ++
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL 306
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
L G + N TL ++ + R + LK G V ++L +Y R ++
Sbjct: 307 LASGQRVNSSTLVGLIPVY-LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A LF K+ SWNA+I+G+ + ++A+ F EM+ + P + +S+ +A
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSA 424
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A G+L GKWVH + + +V LVDMYAK GSI +A ++F+ ++ ++VV+W
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMK 323
N+M+TG HG GK ++ F +ML++GI P VTFL +L ACSH+GL+ EG F ++
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+G +P HY VD+LGRAG L AL+FI MP+EP AVWGALLGAC +HKN E+
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMAN 604
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
A++R+F+LDP + G ++LL+NIY++ AA R+++K+ + K P C+ +E +
Sbjct: 605 VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQ 664
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS-SHVLSYADQQEREAKLQVHSEKL 502
++F + D +HPQ I + +++ K+++ GY ++ + L + +E+E + VHSEKL
Sbjct: 665 YVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKL 724
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF LIST PG+ I I KN+RVC DCH+A KF SK+ ER I+VRD NRFHHF++G CSC
Sbjct: 725 AIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSC 784
Query: 563 GDYW 566
GDYW
Sbjct: 785 GDYW 788
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 186/373 (49%), Gaps = 6/373 (1%)
Query: 7 KLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L++ R+ +HAH + +++ + + I++ Y K + ARK+FD MP +D V W
Sbjct: 125 RLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNT 184
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+ISG+S+N E++I +F ML +GL + TL++VL A A + + G + K
Sbjct: 185 MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV-AELQEYRLGMGIQCLASKK 243
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +VYV + L+ +Y++ + LF ++ + +S+NA+I+G+ E E A+ F
Sbjct: 244 GLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF 303
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
E+L G + + L+ + + +K G L V L +Y +
Sbjct: 304 RELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL 363
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
++ A ++F+ ++ + SWN+M++G Q+GL + F++M+ ++PN VT +L
Sbjct: 364 NEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSIL 422
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
+AC+ G L G+ L+K +E VD+ + G + A + ++ ++
Sbjct: 423 SACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKNV 481
Query: 364 AVWGALLGACRMH 376
W A++ +H
Sbjct: 482 VTWNAMITGYGLH 494
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 207/454 (45%), Gaps = 44/454 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+ A ++ D++ + + + G + R+LF+++ D+ + LI G+S N
Sbjct: 33 IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL 92
Query: 74 PENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
P+++I L++ + + L+P+ FT + + A+ + D++ G +HA + G N++VG
Sbjct: 93 PKSSIFLYTHLRKXTNLRPDNFTYAFAISAA-SRLEDERVGVLLHAHSIVDGVASNLFVG 151
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+++D+Y +F + + A +F + ++ V WN +I+G +R S E ++R F +ML G
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+ ++V TA+A G + K G +V L+ +Y+K G +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+++ + D++S+N+M++G + ++ V F ++L +G N T + ++ L
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 313 DEGQGYFALMKKHGV-----------------------------EPEE--AHYVTFVDLL 341
+ L K G+ PE+ A + +
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGY 391
Query: 342 GRAGLLDRALKFIREM--PIEPTAAVWGALLGACRMHKNVELGAYA-----AERIFELDP 394
+ GL DRA+ +EM + P ++L AC + +G + +ER+ E +
Sbjct: 392 TQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERL-ESNV 450
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ S L ++YA G + +A + +M + V
Sbjct: 451 YVSTA---LVDMYAKCGSIVEARQLFDLMVDKNV 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH I ++++ + +++ YAKCG + EAR+LFD M K++VTW
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+GY + + A+ LF +ML+ G+ P T S+L A + H+
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG+ + ++D+ R Q+ +A
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNA 571
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/598 (39%), Positives = 344/598 (57%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +HA ++ + D + + ++ YAKCGC EA+ +F+ + ++ V W
Sbjct: 280 CARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI+G+ Q+ ++ LF+QM + +QF L++++ D GRQ+H+ CL
Sbjct: 340 TVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC-CSRMDLCLGRQLHSLCL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA--------------WF----------------- 150
K G V V +SL+ MYA+ D + A W
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKARE 458
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTG 209
F + +KN ++WNA++ + + E LR ++ ML E P +Y ++F A G
Sbjct: 459 FFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLG 518
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + +K G L V N ++ MY+K G I +A KVF+ L +D+VSWN+M+T
Sbjct: 519 ANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMIT 578
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ +L+ G P+ ++++ VL+ CSH+GL+ EG+ YF +MK+ H +
Sbjct: 579 GYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNIS 638
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I EMP++PTA VWGALL AC++H N EL AA+
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKH 698
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELD DSG ++L+A IYA AG+ +D+A+ RK+M++ G+KK P SW+E N VH+F A
Sbjct: 699 VFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKA 758
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+D +HPQ I KK E+ EKI ++GYV D E HSEKLA+AF L
Sbjct: 759 DDVSHPQVIAIRKKLDELMEKIARLGYV--------RTDSPRSEIH---HSEKLAVAFGL 807
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+S P IHI KN+R+CGDCH+ K S V RE ++RD RFHHF G CSCGDYW
Sbjct: 808 MSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 165/312 (52%), Gaps = 6/312 (1%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
I +N++L Y K +D A +LFD MP +D+V+W ++S SQ+ + A+ + M
Sbjct: 204 IFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++ + T +S L A A + ++G+Q+HA ++ + YV S+L+++YA+
Sbjct: 264 KGVRLDSTTYTSSLTAC-ARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFK 322
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A +F +L +N V+W LIAG + +++ F++M E F+ +++ +
Sbjct: 323 EAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCC 382
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
S L G+ +H+ +KSG V N+L+ MYAK +++ AE +F + ++D+VSW S
Sbjct: 383 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTS 442
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKH 325
M+T +Q G +F+ M N +T+ +L A G ++G + Y ++ +
Sbjct: 443 MITAHSQVGNIAKAREFFDGM----STKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEK 498
Query: 326 GVEPEEAHYVTF 337
V P+ YVT
Sbjct: 499 DVRPDWVTYVTL 510
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 34/379 (8%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N +LN Y K G L +A +LF MP +D+ +W L+SGY Q+ Q ++ F M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 86 RLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
R G PN FT + +K+ GA + Q+ K+G + V ++L+DM+ R
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGA-LGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGT 188
Query: 145 -------------------------------MDDAWFLFTALESKNEVSWNALIAGHARK 173
+D A LF ++ ++ VSWN +++ ++
Sbjct: 189 VDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL +M +G +Y+S TA A SL GK +HA VI++ + +V
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVA 308
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ LV++YAK G ++A+ VFN L R+ V+W ++ G QHG +V F +M +
Sbjct: 309 SALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMT 368
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+Q +++ C L G+ +L K G + + + + L A
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESI 428
Query: 354 IREMPIEPTAAVWGALLGA 372
R M E W +++ A
Sbjct: 429 FRFMN-EKDIVSWTSMITA 446
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-I 292
N +++ Y K G + DA ++F R+ RDV SWN++++G Q A++ F M R+G
Sbjct: 75 NVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDS 134
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+PN TF + +C G +++K G + + VD+ R G +D A +
Sbjct: 135 SPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASR 194
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
+ EPT ++L V+ +A E + D ++ + + +GR
Sbjct: 195 LFVRIK-EPTIFCRNSMLVGYVKTYGVD---HALELFDSMPERDVVSWNMMVSALSQSGR 250
Query: 413 LNDAARARKMMKESGVK 429
+ +A M+ GV+
Sbjct: 251 VREALDMVVDMQSKGVR 267
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 342/566 (60%), Gaps = 11/566 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV---KDMVTWTALISG 67
R +H ++ + ++ N +L Y++ G L+EAR++F EM +D V+W A+I
Sbjct: 158 VRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVA 217
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Q+ + A+ LF +M+R GLK + FT++SVL A D G Q H +K G+
Sbjct: 218 CGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTC-VKDLVGGMQFHGMMIKSGFHG 276
Query: 128 NVYVGSSLLDMYARF-DQMDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKALRTFSE 185
N +VGS L+D+Y++ M + +F + + + V WN +I+G ++ + E + F E
Sbjct: 277 NSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFRE 336
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNTLVDMYAKSG 244
M GF P S+ V +A ++ S GK VHA IKS V N LV MY+K G
Sbjct: 337 MQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCG 396
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ DA +VF+ + + ++VS NSM+ G AQHG+ ++R FE ML+ IAPN +TF+ VL+
Sbjct: 397 NVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLS 456
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC H G ++EGQ YF +MK + +EPE HY +DLLGRAG L A + I MP P +
Sbjct: 457 ACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGS 516
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
W LLGACR H NVEL AA +L+P+++ P+++L+N+YASA R +AA +++M
Sbjct: 517 IEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLM 576
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+E GVKK+P CSW+E VH+FVA D +HP IH EI K+KQ GYVPD L
Sbjct: 577 RERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWAL 636
Query: 484 ---SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ E+E +L HSEKLA+AF LIST I + KN+R+CGDCH+A K S +
Sbjct: 637 VKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAIT 696
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI VRDT+RFH F++G CSCGDYW
Sbjct: 697 GREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 205/406 (50%), Gaps = 19/406 (4%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT++NAYAK + AR++FDE+P D+V++ LI+ Y+ + A+ LF+++ L
Sbjct: 79 NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS V+ A G D RQ+H F + GYD V +++L Y+R +++A
Sbjct: 139 LDGFTLSGVIIACG---DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARR 195
Query: 151 LFTALES---KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + ++EVSWNA+I + EG +A+ F EM+R G + F+ +SV TA
Sbjct: 196 VFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTC 255
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNS 266
L G H +IKSG + VG+ L+D+Y+K +G + + KVF + D+V WN+
Sbjct: 256 VKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNT 315
Query: 267 MLTGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
M++G +Q+ L + + F +M NG P+ +F+CV +ACS+ G+ AL K
Sbjct: 316 MISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKS 375
Query: 326 GVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ V + + G + A + MP ++ + G + VE
Sbjct: 376 DIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVE---- 431
Query: 385 AAERIFELD-PHDSGPHILLANIYASA----GRLNDAARARKMMKE 425
+ R+FEL D P+ + SA G++ + + MMKE
Sbjct: 432 -SLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 7/247 (2%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV+ ++L++ YA+ + A +F + + VS+N LIA +A + E ALR F+E+
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
F F+ S V A L + +H V+ G A V N ++ Y++ G +
Sbjct: 134 ELRFGLDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191
Query: 248 DAEKVFNRLLK---RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+A +VF + + RD VSWN+M+ C QH G V F +M+R G+ + T VLT
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR-AGLLDRALKFIREMPIEPTA 363
A + L G + +M K G +DL + AG + K E+ P
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA-APDL 310
Query: 364 AVWGALL 370
+W ++
Sbjct: 311 VLWNTMI 317
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
F NTL++ YAK I A +VF+ + + D+VS+N+++ A G + +R F ++
Sbjct: 75 VFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRE 134
Query: 290 NGIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
+ T V+ AC GL+ + + + G + + + R G L+
Sbjct: 135 LRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVC---GYDCYASVNNAVLACYSRKGFLN 191
Query: 349 RALKFIREMPI--EPTAAVWGALLGACRMHKN----VELGAYAAERIFELD 393
A + REM W A++ AC H+ VEL R ++D
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 344/540 (63%), Gaps = 4/540 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ ++ YA G + A+K+FDE+PVKD+V+W ALISGY++ + A+ LF +M+
Sbjct: 168 DVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 227
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+ +KP++ T+ +VL A A+ + GRQVH++ +G+ N+ + ++L+D+Y + ++
Sbjct: 228 KTNVKPDESTMVTVLSACAQSASIE-LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV 286
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A LF L K+ +SWN LI G+ + ++AL F EMLR G P + S+ A
Sbjct: 287 ETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPAC 346
Query: 206 ASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A G+++ G+W+H ++ K G + + +L+DMYAK G IE A++VF+ +L R + S
Sbjct: 347 AHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS 406
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALM 322
WN+M+ G A HG F +M ++GI P+ +TF+ +L+ACSH+G+LD G+ F ++
Sbjct: 407 WNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ + + P+ HY +DLLG +GL A + I M ++P +W +LL AC+MH NVELG
Sbjct: 467 EDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELG 526
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A+ + +++P +SG ++LL+NIYA+AGR N+ A+ R ++ + G+KK P CS +E +
Sbjct: 527 ESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSV 586
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
VH F+ D HP+ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKL
Sbjct: 587 VHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 646
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RFHHF DG CSC
Sbjct: 647 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 210/431 (48%), Gaps = 44/431 (10%)
Query: 6 KKLKEARIVHAHILGSAFKN-----DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
K L+ RI+HA ++ + N ++ ++L+ + L A +FD + +++
Sbjct: 13 KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDG--LTYAISVFDSIQEPNLLI 70
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W + G++ + P +A+ L+ M+ LGL PN +T +LKA A + + G+Q+H
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKAC-AKSKAFREGQQIHGHV 129
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL-------------- 166
LK G D ++YV +SL+ MY + + +DA +F ++ VS+ AL
Sbjct: 130 LKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQ 189
Query: 167 -----------------IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
I+G+A ++AL F EM++ +P + +V +A A +
Sbjct: 190 KMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSA 249
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
S+E G+ VH+ + G + N L+D+Y K G +E A +F L +DV+SWN+++
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIG 309
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GV 327
G L K + F++MLR+G +PN+VT L +L AC+H G +D G+ + K GV
Sbjct: 310 GYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 369
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH--KNVELGAYA 385
+ + +D+ + G ++ A + M + + + W A++ MH N ++
Sbjct: 370 SNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRANPAFDIFS 428
Query: 386 AERIFELDPHD 396
R ++P D
Sbjct: 429 RMRKDGIEPDD 439
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 148/283 (52%), Gaps = 15/283 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ R VH+ I F +++ + N +++ Y KCG ++ A LF+ + KD+++W
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
LI GY+ + + A++LF +MLR G PN+ T+ S+L A GA D GR +H +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAID--IGRWIHVYI 362
Query: 121 LKY--GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G + +SL+DMYA+ ++ A +F ++ +++ SWNA+I G A
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANP 422
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN---- 234
A FS M ++G EP ++ + +A + +G L+ G+ H+ +S +
Sbjct: 423 AFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMTEDYKITPKLEHY 478
Query: 235 -TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++D+ SG ++AE++ N + + D V W S+L C HG
Sbjct: 479 GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 103/236 (43%), Gaps = 9/236 (3%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFNRLLK 258
+ L + +L+ + +HA +IK+G + + L++ S + A VF+ + +
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+++ WN+M G A + + + M+ G+ PN TF +L AC+ + EGQ
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
+ K G + + + + + + + G + A K + + + AL+ +
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVS-YTALIKGYASNGY 184
Query: 379 VELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
+ +A+++F+ P D L + YA G +A K M ++ VK + +
Sbjct: 185 IX----SAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDES 236
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/570 (41%), Positives = 345/570 (60%), Gaps = 16/570 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG---CLDEARKLFDEMPVKDM 58
CT L ++ +H+ L F +D + +++ YAK +D A K+F+ M D+
Sbjct: 264 CTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDV 323
Query: 59 VTWTALISGYSQNDQPENAI-ILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTALISGY Q+ EN + +LF +ML +KPN T SS+LKA A +D GRQVH
Sbjct: 324 ISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKAC-ANISDHDSGRQVH 382
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A +K VG++L+ MYA M++A +F L ++ +S +EG
Sbjct: 383 AHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISC---------ITEGR 433
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A + R + +++S+ +A AS G L +G+ +HA +K+G FV N+LV
Sbjct: 434 DAPLDH-RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLV 492
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY++ G +EDA + FN L R+V+SW SM++G A+HG + + F M+ G+ PN V
Sbjct: 493 SMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDV 552
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T++ VL+ACSH GL+ EG+ YF M++ HG+ P HY VDLL R+GL+ AL+FI E
Sbjct: 553 TYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINE 612
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP++ A VW LLGACR H N+E+G AA+ + EL+P D P++LL+N+YA AG ++
Sbjct: 613 MPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEV 672
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
AR R M+++ + KE SW+E +N H F A D +HP+ I+ K + +IK +GYV
Sbjct: 673 ARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYV 732
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD+S VL + +E L HSEK+A+AF LI+T I I KN+RVC DCHSA K+
Sbjct: 733 PDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYM 792
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK REII+RD+NRFH +DG CSCG+YW
Sbjct: 793 SKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 189/361 (52%), Gaps = 18/361 (4%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
DIA+ + +++ A+ G L ARK+FD + K +V WT LIS Y Q + E A+ +F
Sbjct: 186 TDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDF 245
Query: 85 LRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
L G +P+++T+SS++ A + G+ + G Q+H+ L+ G+ + V L+DMYA+ +
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSV--RLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303
Query: 144 ---QMDDAWFLFTALESKNEVSWNALIAGHARKSEGE-KALRTFSEMLREGFEPTHFSYS 199
MD A +F + + +SW ALI+G+ + E K + F EML E +P H +YS
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A A+ + G+ VHAHVIKS VGN LV MYA+SG +E+A +VFN+L +R
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
++S C G +M GI+ + TF +++A + G+L +GQ
Sbjct: 424 SMIS-------CITEGRDAPLDHRIGRM-DMGISSS--TFASLISAAASVGMLTKGQQLH 473
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
A+ K G + + V + R G L+ A + E+ + W +++ H
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISGLAKHGYA 532
Query: 380 E 380
E
Sbjct: 533 E 533
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 186/359 (51%), Gaps = 11/359 (3%)
Query: 8 LKEARIVHAHIL-GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALI 65
L+ R +H +L G D + N++L Y++CG + AR +FD M ++D+V+WTA+
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG- 124
S ++N +++L +ML GL PN +TL +V A G V K G
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ ++ VGS+L+DM AR + A +F L K V W LI+ + + E+A+ F
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+ L +GFEP ++ SS+ +A GS+ G +H+ ++ G A V LVDMYAKS
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303
Query: 245 ---SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR-WFEKMLRNGIAPNQVTFL 300
+++ A KVF R+ K DV+SW ++++G Q G+ + V F +ML I PN +T+
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREM 357
+L AC++ D G+ A + K AH V V + +G ++ A + ++
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKS--NQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/576 (40%), Positives = 357/576 (61%), Gaps = 17/576 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDMV 59
C H+ +++ +H+ S F + ++++N++L Y+K G L+EA +F+ M V+D V
Sbjct: 151 CNHVGLIRQ---LHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEV 207
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++I Y Q+ + A+ L+ M+ G + + FTL+SVL + + D G Q HA
Sbjct: 208 SWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL-TTFSCVEDLSGGLQFHAK 266
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSE-GE 177
+K G++ N +VGS L+DMYA+ M ++ +F + + V WN +I+G+++ E
Sbjct: 267 AIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSV 326
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS---GGQLVAFVGN 234
+AL F +M R G+ P S+ +A ++ S QGK HA +KS Q+ V N
Sbjct: 327 EALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQIS--VNN 384
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LV MY+K G+++DA K+F R+ + + V+ NS++ G AQHG+G ++ FE+ML IAP
Sbjct: 385 ALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAP 444
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+T + +L+AC+H G ++EG+ YF +MK G+EPE HY +DLLGRAG L A +
Sbjct: 445 TSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERL 504
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I MP P +A W ALLGACR + N+EL AA + +L+P ++ P+I+LA++Y++A +
Sbjct: 505 IDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKW 564
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
+AAR RK+M++ G++K+P CSW+E VH+FVA D++HP+ IH E+ K+K+
Sbjct: 565 EEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRA 624
Query: 474 GYVPDSSHVLSYAD---QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
GYVPD D +QE+E L HSEKLA+AF L+ T G + + KN+R+CGDCH
Sbjct: 625 GYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCH 684
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+A KF S + R+I VRD RFH F DG CSCGDYW
Sbjct: 685 NAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 46/444 (10%)
Query: 17 HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
H + ++ N ++ AYAK + A LFD++P D+V++ LI+ Y+ +
Sbjct: 64 HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
A+ LF +M +GL + FT S V+ A RQ+H+ G+D V V +SLL
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITAC---CNHVGLIRQLHSLAFSSGFDSYVSVKNSLL 180
Query: 137 DMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
Y++ +++A +F + E ++EVSWN++I + + G KAL + +M+ GFE
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS-IEDAEKVF 253
F+ +SV T + L G HA IK+G VG+ L+DMYAK G+ + ++ KVF
Sbjct: 241 MFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVF 300
Query: 254 NRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
+ D+V WN+M++G +Q+ L + F +M R G P+ +F+C ++ACS+
Sbjct: 301 EEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSP 360
Query: 313 DEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMP------------- 358
+G+ + AL K + + V + + G L A K + MP
Sbjct: 361 SQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAG 420
Query: 359 ---------------------IEPTAAVWGALLGACRMHKNVELGA---YAAERIFELDP 394
I PT+ ++L AC VE G + IF ++P
Sbjct: 421 YAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEP 480
Query: 395 HDSGPHILLANIYASAGRLNDAAR 418
++ + + ++ AG+L++A R
Sbjct: 481 -EAEHYSCMIDLLGRAGKLSEAER 503
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/544 (41%), Positives = 338/544 (62%), Gaps = 10/544 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ NT+++ YA+ G + EAR+LFD P++D+ TWTA++SGY+QN E A +F
Sbjct: 290 QRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDA 349
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M N + ++++ A ++ A + WN ++L YA+
Sbjct: 350 MP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWN-----TMLTGYAQAG 400
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+D+A +F + K+ VSW A++A +++ E+ L+ F EM R G +++ V +
Sbjct: 401 MLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLS 460
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A +LE G +H+ +IK+G + FVGN L+ MY K GS+E+A F + +RDVVS
Sbjct: 461 TCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVS 520
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM- 322
WN+M+ G A+HG GK + F+ M + P+ +T + VL ACSH+GL+++G YF M
Sbjct: 521 WNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH 580
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ GV + HY +DLLGRAG LD A+ +++MP EP + +WGALLGA R+H+N ELG
Sbjct: 581 RDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELG 640
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AAE+IFEL+P ++G ++LL+NIYAS+G+ D + R +M E GVKK P SW+E +N
Sbjct: 641 RNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNK 700
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
VH F D HP+R I+ ++ ++K+ GYV + VL +++E+E L+ HSEKL
Sbjct: 701 VHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKL 760
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+A+ ++ PPG I + KN+RVC DCH+AFK S + R II+RD+NRFHHFRDG CSC
Sbjct: 761 AVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSC 820
Query: 563 GDYW 566
GDYW
Sbjct: 821 GDYW 824
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ +H+ ++ + + + N +L Y KCG ++EA F+EM +D+V+W
Sbjct: 462 CADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSW 521
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ + A+ +F M + KP+ TL VL A +K ++
Sbjct: 522 NTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHR 581
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
+G + ++D+ R ++D+A L + + W AL+ G +R +
Sbjct: 582 DFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL-GASRIHRNSELG 640
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
R +E + E EP + + + + ++ GKW
Sbjct: 641 RNAAEKIFE-LEPENAGMYVLLSNIYAS----SGKW 671
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 350/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VH + + F + NT+L+ Y+KCG LD A+ +F EM + +V++
Sbjct: 306 CADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSY 365
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY++ A+ LF +M G+ P+ +T+++VL D+ G++VH +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDE-GKRVHEWIK 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ ++++V ++L+DMYA+ M +A +F+ + K+ +SWN +I G+++ +AL
Sbjct: 425 ENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALS 484
Query: 182 TFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ +L E F P + + V A AS + ++G+ +H +++++G V N+LVDMY
Sbjct: 485 LFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G++ A +F+ + +D+VSW M+ G HG GK + F +M + GI P++++F+
Sbjct: 545 AKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFV 604
Query: 301 CVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSH+GL+DEG +F +M+ +EP HY VD+L R G L +A +FI MPI
Sbjct: 605 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPI 664
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
P A +WGALL CR+H +V+L AE++FEL+P ++G ++L+ANIYA A + + R
Sbjct: 665 PPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRL 724
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK + + G++K P CSW+E K V++FVA D ++P+ I R + ++ + GY P +
Sbjct: 725 RKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLT 784
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L A++ E+E L HSEKLA+A +IS+ G I + KN+RVCGDCH KF SK+
Sbjct: 785 KYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKL 844
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFH F+DG CSC +W
Sbjct: 845 TRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 199/378 (52%), Gaps = 9/378 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L+ + +H +IL S F ++ N+++ Y K +D ARK+FDEM +D+++W
Sbjct: 206 SSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWN 265
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQVHAF 119
++I+GY N E + +F QML G++ + T+ SV AG D + GR VH F
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF----AGCADSRLISLGRAVHCF 321
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K + ++LLDMY++ +D A +F + ++ VS+ ++IAG+AR+ +A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEA 381
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F EM EG P ++ ++V A L++GK VH + ++ FV N L+DM
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDM 441
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVT 298
YAK GS+ +AE VF+ + +D++SWN+++ G +++ + F +L +P++ T
Sbjct: 442 YAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERT 501
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
CVL AC+ D+G+ + ++G + + VD+ + G L A ++
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 359 IEPTAAVWGALLGACRMH 376
+ + W ++ MH
Sbjct: 562 SKDLVS-WTVMIAGYGMH 578
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 189/371 (50%), Gaps = 2/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K LK+ + V I G+ F D + + + Y CG L EA ++FD++ ++ + W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L++ +++ +I LF +M+ G++ + +T S V K+ + + + G Q+H + L
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNG-GEQLHGYIL 222
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ VG+SL+ Y + ++D A +F + ++ +SWN++I G+ EK L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML G E + SVF A + + G+ VH +K+ NTL+DMY+
Sbjct: 283 VFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYS 342
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A+ VF + R VVS+ SM+ G A+ GL V+ FE+M GI+P+ T
Sbjct: 343 KCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL C+ LLDEG+ +K++ + + +D+ + G + A EM ++
Sbjct: 403 VLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKD 462
Query: 362 TAAVWGALLGA 372
+ W ++G
Sbjct: 463 IIS-WNTVIGG 472
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 176/383 (45%), Gaps = 18/383 (4%)
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ ++ +NA+ L + + P TL SVL+ A + K G++V F G+
Sbjct: 71 FCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLC-ADSKSLKDGKEVDNFIRGNGFVL 127
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +GS L MY + +A +F ++ + + WN L+ A+ + ++ F +M+
Sbjct: 128 DSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G E +++S V + +S S+ G+ +H +++KSG VGN+LV Y K+ ++
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVD 247
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A KVF+ + +RDV+SWNS++ G +GL + + F +ML +GI + T + V C+
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCA 307
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+ L+ G+ K E+ T +D+ + G LD A REM +
Sbjct: 308 DSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTS 367
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
+ G R L A + E++ P ++Y LN AR R + +
Sbjct: 368 MIAGYAREG----LAGEAVKLFEEMEEEGISP-----DVYTVTAVLNCCARNRLLDEGKR 418
Query: 428 VKKEPACSWV-ETKNAVHMFVAN 449
V + W+ E +FV+N
Sbjct: 419 VHE-----WIKENDMGFDIFVSN 436
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/582 (38%), Positives = 351/582 (60%), Gaps = 25/582 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + H +++DI + + ++ Y+ CG L++ARK+FDE+P +D+V+W
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSW 145
Query: 62 TALISGYSQNDQPENAIILFSQML-------------RLGLKPNQFTLSSVLKASGAGAT 108
T++I GY N +A+ LF +L +GL +S+ + G T
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS---VISACSRVPAKGLT 202
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ--MDDAWFLFTALESKNEVSWNAL 166
+ +H+F +K G+D V VG++LLD YA+ + + A +F + K+ VS+N++
Sbjct: 203 E-----SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 167 IAGHARKSEGEKALRTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
++ +A+ +A F +++ + + S+V A++ +G+L GK +H VI+ G
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ VG +++DMY K G +E A K F+R+ ++V SW +M+ G HG + F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRA 344
M+ +G+ PN +TF+ VL ACSHAGL EG +F MK + GVEP HY VDLLGRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
G L +A I+ M ++P + +W +LL ACR+HKNVEL + R+FELD + G ++LL+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
+IYA AGR D R R +MK G+ K P S +E VH+F+ D+ HPQR I++
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
E++ K+ + GYV ++S V D++E+E L+VHSEKLA+AF +++T PGST+++ KN+R
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
VC DCH+ K SK+V+RE +VRD RFHHF+DG CSCGDYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 136/326 (41%), Gaps = 49/326 (15%)
Query: 151 LFTALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF K +V SWN++IA AR + +AL FS M + PT S+ A +S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ GK H G Q FV + L+ MY+ G +EDA KVF+ + KRD+VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFL------CVLTACSHA-------------- 309
G +G V F+ +L + + FL V++ACS
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 310 ------------GLLDE----GQGYFALMKK---HGVEPEEAHYVTFVDLLGRAGLLDRA 350
LLD G+G A+ +K V+ + Y + + + ++G+ + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 351 LKFIREM----PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS---GPHILL 403
+ R + + A +L A + +G +++ + D G I+
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII- 329
Query: 404 ANIYASAGRLNDAARARKMMKESGVK 429
++Y GR+ A +A MK V+
Sbjct: 330 -DMYCKCGRVETARKAFDRMKNKNVR 354
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/534 (41%), Positives = 329/534 (61%), Gaps = 5/534 (0%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
++ Y+KCG + A LF E D+V + A+I GY+ N + E ++ LF +++ G K
Sbjct: 263 ISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKS 322
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
TL S++ SG +H + LK + + V ++L +Y++ ++++ A LF
Sbjct: 323 STLVSLVPVSG----HLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFD 378
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
K+ SWNA+I+G+ + E A+ F EM F P + + + +A A G+L
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSL 438
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
GKWVH V + + +V L+ MYAK GSI +A ++F+ + K++ V+WN+M++G
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGL 498
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEA 332
HG G+ + F +ML +GIAP VTFLCVL ACSHAGL+ EG F +++ ++G EP
Sbjct: 499 HGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
HY VD+LGRAG L RAL+FI MPI+P +VW LLGACR+HK+ L +E++FEL
Sbjct: 559 HYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 393 DPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDA 452
DP + G H+LL+NI+++ AA R+ K+ + K P + +E H+F + D +
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 678
Query: 453 HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTP 512
HPQ IH+K ++ K+++ GY P++ L +++ERE ++VHSE+LA+AF LI+T
Sbjct: 679 HPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 738
Query: 513 PGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PG+ I I KN+RVC DCH+A K SK+ ER I+VRD NRFHHF+DG CSCGDYW
Sbjct: 739 PGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 139/264 (52%), Gaps = 5/264 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + L S F + ++ + Y+K ++ ARKLFDE P K + +W A+ISGY+QN
Sbjct: 341 IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVG 132
E+AI LF +M PN T++ +L A GA G+ VH ++ ++YV
Sbjct: 401 TEDAISLFREMQNSEFSPNPVTITCILSACAQLGALS--LGKWVHDLVRSTDFESSIYVS 458
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++L+ MYA+ + +A LF + KNEV+WN +I+G+ G++AL FSEML G
Sbjct: 459 TALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIA 518
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVI-KSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
PT ++ V A + G +++G + +I + G + +VD+ ++G ++ A +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQ 578
Query: 252 VFNRL-LKRDVVSWNSMLTGCAQH 274
+ ++ W ++L C H
Sbjct: 579 FIEAMPIQPGPSVWETLLGACRIH 602
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 205/449 (45%), Gaps = 41/449 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
HA I+ F+NDI++ + + G + AR +F + D+ + L+ G+S N+
Sbjct: 39 THAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
P +++ +F+ + + LKPN T + + A+ +G DD+ G +H + G D + +G
Sbjct: 99 PHSSLAVFAHLRKSTDLKPNSSTYAFAISAA-SGFRDDRAGCVIHGQAIVDGCDSELLLG 157
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+++ MY +F +++DA +F + K+ + WN +I+G+ + ++++ F +++ E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC- 216
Query: 193 PTHFSYSSVFTALASTGSLEQ---GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
T +++ L + L++ G +H+ K+G +V + +Y+K G I+ A
Sbjct: 217 -TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMA 275
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+F + D+V++N+M+ G +G + ++ F++++ +G T + ++ H
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL 335
Query: 310 GLLDEGQGY-----------------FALMKKHGVE---------PEEA--HYVTFVDLL 341
L+ GY K + +E PE++ + +
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 342 GRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
+ GL + A+ REM P +L AC + LG + + + D +S
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD-FESS 454
Query: 399 PHI--LLANIYASAGRLNDAARARKMMKE 425
++ L +YA G + +A R M +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPK 483
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 11/211 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH + + F++ I + ++ YAKCG + EAR+LFD MP K+ VTW
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTW 489
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGAT---DDKFGRQVH 117
+ISGY + + A+ +FS+ML G+ P T VL A S AG D+ F +H
Sbjct: 490 NTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEG 176
+YG++ +V + ++D+ R + A A+ + S W L+ G R +
Sbjct: 550 ----RYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLL-GACRIHKD 604
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
RT SE L E +P + Y + + + S
Sbjct: 605 TNLARTVSEKLFE-LDPDNVGYHVLLSNIHS 634
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 3/269 (1%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q HA + +G+ ++ + + L + + A +F +++ + +N L+ G +
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 175 EGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+L F+ + + +P +Y+ +A + G +H I G +G
Sbjct: 98 SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ +V MY K +EDA KVF+R+ ++D + WN+M++G ++ + +++ F ++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 294 P-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ T L +L A + L G +L K G + F+ L + G + A
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVEL 381
RE P + A++ + EL
Sbjct: 278 LFREFR-RPDIVAYNAMIHGYTSNGETEL 305
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/591 (40%), Positives = 347/591 (58%), Gaps = 41/591 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + +D + N +++AY KC C++ AR++FD++ VKD+V+WT++ S Y
Sbjct: 154 VHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGL 213
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P + +F +M G+KPN TLSS+L A + D K GR +H F +++G NV+V S
Sbjct: 214 PRLGLAVFCEMGWNGVKPNSVTLSSILPAC-SELKDLKSGRAIHGFAVRHGMIENVFVCS 272
Query: 134 SLLDMYAR----------FDQM---------------------DDAWFLFTALESK---- 158
+L+ +YAR FD M D LF+ + SK
Sbjct: 273 ALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEA 332
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
+E +WNA+I G + EKA+ +M GF+P + SS A + SL GK VH
Sbjct: 333 DEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVH 392
Query: 219 AHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+V + G L LV MYAK G + + VF+ + ++DVV+WN+M+ A HG
Sbjct: 393 CYVFRHWLIGDLTTMTA--LVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGN 450
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYV 335
G+ + FE ML++GI PN VTF VL+ CSH+ L++EG F M + H VEP+ HY
Sbjct: 451 GREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYA 510
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VD+ RAG L A +FI+ MP+EPTA+ WGALLGACR++KNVEL +A ++FE++P+
Sbjct: 511 CMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPN 570
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ G ++ L NI +A ++A+ AR +MKE G+ K P CSW++ + VH FV D + +
Sbjct: 571 NPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNME 630
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I+ E+ EK+K GY PD+ +VL DQ+E+ L HSEKLA+AF +++ S
Sbjct: 631 SDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQS 690
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+I + KN+R+CGDCH+A K+ SKVV IIVRD+ RFHHFR+G CSC D W
Sbjct: 691 SIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 165/381 (43%), Gaps = 37/381 (9%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L A G A++LFD +P D T + LIS ++ P AI L++ + G+KP+
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+V KA GA + ++VH ++ G + ++G++L+ Y + ++ A +F
Sbjct: 132 NSVFLTVAKACGASGDASRV-KEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVF 190
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
L K+ VSW ++ + + L F EM G +P + SS+ A + L+
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK 250
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT--- 269
G+ +H ++ G FV + LV +YA+ S++ A VF+ + RDVVSWN +LT
Sbjct: 251 SGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310
Query: 270 --------------------------------GCAQHGLGKATVRWFEKMLRNGIAPNQV 297
GC ++G + V KM G PNQ+
Sbjct: 311 TNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T L ACS L G+ + +H + + V + + G L+ + + + +M
Sbjct: 371 TISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLS-RNVFDM 429
Query: 358 PIEPTAAVWGALLGACRMHKN 378
W ++ A MH N
Sbjct: 430 ICRKDVVAWNTMIIANAMHGN 450
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 168/372 (45%), Gaps = 57/372 (15%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-- 59
C+ LK LK R +H + ++ + + +++ YA+C + +AR +FD MP +D+V
Sbjct: 243 CSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSW 302
Query: 60 ---------------------------------TWTALISGYSQNDQPENAIILFSQMLR 86
TW A+I G +N Q E A+ + +M
Sbjct: 303 NGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQN 362
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
LG KPNQ T+SS L A + G++VH + ++ ++ ++L+ MYA+ ++
Sbjct: 363 LGFKPNQITISSFLPACSI-LESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLN 421
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+ +F + K+ V+WN +I +A G + L F ML+ G +P +++ V + +
Sbjct: 422 LSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCS 481
Query: 207 STGSLEQGKWV-----HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRD 260
+ +E+G + H+++ A +VD+++++G + +A + R+ ++
Sbjct: 482 HSRLVEEGLQIFNSMGRDHLVEPDANHYA----CMVDVFSRAGRLHEAYEFIQRMPMEPT 537
Query: 261 VVSWNSMLTGCAQHG---LGKATV-RWFEKMLRNGIAPNQV-TFLCVLTACSHAGLLDEG 315
+W ++L C + L K + + FE I PN ++ + A L E
Sbjct: 538 ASAWGALLGACRVYKNVELAKISANKLFE------IEPNNPGNYVSLFNILVTAKLWSEA 591
Query: 316 QGYFALMKKHGV 327
LMK+ G+
Sbjct: 592 SEARILMKERGI 603
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
++G LL A LF + + + + LI+ + +A+R ++ +
Sbjct: 67 HLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRAR 126
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G +P + + +V A ++G + K VH I+ G AF+GN L+ Y K +E A
Sbjct: 127 GIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGA 186
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VF+ L+ +DVVSW SM + GL + + F +M NG+ PN VT +L ACS
Sbjct: 187 RRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL 246
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+ +HG+ V L R + +A MP + W +
Sbjct: 247 KDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVS-WNGV 305
Query: 370 LGA 372
L A
Sbjct: 306 LTA 308
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/569 (41%), Positives = 341/569 (59%), Gaps = 17/569 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + ++++ +LG+A +L+ YAKCG L AR++FD MP ++ VTW
Sbjct: 143 CLHPNRNSKSKLTDGVLLGTA----------LLDMYAKCGSLLYARRVFDAMPARNEVTW 192
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL---KPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+ALI G+ + A +LF ML GL P +++S L+A A + G Q+HA
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRAC-ASLDHLRMGEQLHA 249
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G ++ G+SLL MYA+ +D A LF + K+ VS++AL++G+ + E+
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEE 309
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A F +M EP + S+ A + +L+ G+ H VI G + N L+D
Sbjct: 310 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALID 369
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G I+ + +VFN + RD+VSWN+M+ G HGLGK F +M G P+ VT
Sbjct: 370 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 429
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+C+L+ACSH+GL+ EG+ +F +M +G+ P HY+ VDLL R G LD A +FI+ M
Sbjct: 430 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSM 489
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+ VW ALLGACR++KN++LG + I EL P +G +LL+NIY++AGR ++AA
Sbjct: 490 PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAA 549
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R + K G KK P CSW+E ++H FV D +HPQ I+++ I IK++GY P
Sbjct: 550 EVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQP 609
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D+S VL +++E+E L HSEKLA+A+ ++S TI + KN+RVCGDCH+ K S
Sbjct: 610 DTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHIS 669
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V R IIVRD NRFHHF++G CSCGD+W
Sbjct: 670 LVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 211/432 (48%), Gaps = 32/432 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L R +H H + + + D+ + +L+ Y KC CL +A +F MP +D+V W
Sbjct: 20 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 79
Query: 62 TALISGYSQNDQPENAI--ILFSQMLRLGLKPNQFTLSSVLK---ASGAGATDDKFGRQV 116
A+++GY+ + +A+ +L QM L+PN TL ++L GA A G V
Sbjct: 80 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ----GTSV 135
Query: 117 HAFCLKYGYDWN----------VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
HA+C++ N V +G++LLDMYA+ + A +F A+ ++NEV+W+AL
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195
Query: 167 IAGHARKSEGEKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
I G S +A F ML +G PT S +S A AS L G+ +HA + K
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 253
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
SG GN+L+ MYAK+G I+ A +F+ + +D VS++++++G Q+G +
Sbjct: 254 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 313
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F+KM + P+ T + ++ ACSH L G+ + G+ E + +D+ +
Sbjct: 314 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 373
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD----PHDSGP 399
G +D + + MP + W ++ +H LG A E++ P D
Sbjct: 374 CGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGKEATALFLEMNNLGFPPDGVT 429
Query: 400 HILLANIYASAG 411
I L + + +G
Sbjct: 430 FICLLSACSHSG 441
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 18/296 (6%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
MLR + PN +T LKA A A D GR +H + G +++V ++LLDMY +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALA-DHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCA 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF--SEMLREGFEPTHFSYSSV 201
+ DA +F + +++ V+WNA++AG+A A+ +M P + ++
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 202 FTALASTGSLEQGKWVHAHVIK--------SGGQLV--AFVGNTLVDMYAKSGSIEDAEK 251
LA G+L QG VHA+ I+ S +L +G L+DMYAK GS+ A +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG---IAPNQVTFLCVLTACSH 308
VF+ + R+ V+W++++ G F+ ML G ++P + L AC+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS 237
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
L G+ AL+ K GV + + + + +AGL+D+A+ EM ++ T +
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 293
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
MLR P ++++ A ++ G+ +H H I +G Q FV L+DMY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF--EKMLRNGIAPNQVTFLCVL 303
+ DA +F + RD+V+WN+ML G A HG+ V +M + + PN T + +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHY----------VTFVDLLGRAGLLDRALKF 353
+ G L +G A + + P +D+ + G L A +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 354 IREMPIEPTAAVWGALLG 371
MP W AL+G
Sbjct: 181 FDAMPAR-NEVTWSALIG 197
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/598 (39%), Positives = 350/598 (58%), Gaps = 35/598 (5%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ LK L ++H ++ ++ +D+ + N+++N Y G D A ++F MP KD+V+W
Sbjct: 184 SRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWN 243
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I+ ++ P+ A++LF +M +KPN T+ SVL A A D +FGR + ++
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSAC-AKKIDLEFGRWICSYIEN 302
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA--- 179
G+ ++ + +++LDMY + ++DA LF + K+ VSW ++ GHA+ ++A
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCI 362
Query: 180 ----------------------------LRTFSEM-LREGFEPTHFSYSSVFTALASTGS 210
L F EM L + +P + A A G+
Sbjct: 363 FDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGA 422
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
++ G W+H ++ K L + +L+DMYAK G++ A +VF+ + ++DV W++M+
Sbjct: 423 IDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGA 482
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEP 329
A +G GKA + F ML I PN VTF +L AC+HAGL++EG+ F M+ +G+ P
Sbjct: 483 LAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVP 542
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+ HYV VD+ GRAGLL++A FI +MPI PTAAVWGALLGAC H NVEL A + +
Sbjct: 543 QIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNL 602
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
EL+P + G +LL+NIYA AG + RK+M++S VKKEP CS ++ VH F+
Sbjct: 603 LELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVG 662
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFAL 508
D++HP I+ K EISEK K IGY PD S++L +++ E L VHSEKLA+AF L
Sbjct: 663 DNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGL 722
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
IST I I KNIR+CGDCH+ K S++ +R+I++RD RFHHFR G CSC DYW
Sbjct: 723 ISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 198/411 (48%), Gaps = 40/411 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDM 58
+CT+ +LK+ +HAH+L ++ D + +L AYA C CL A+ +F+++P ++
Sbjct: 81 QCTNTMQLKQ---IHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNL 137
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVH 117
W LI GY+ + P + ++F ML + PN+FT + KA+ G +H
Sbjct: 138 YCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVL-HLGSVLH 196
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K ++++ +SL++ Y D A +FT + K+ VSWNA+I A +
Sbjct: 197 GMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPD 256
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
KAL F EM + +P + SV +A A LE G+W+ +++ +G + N ++
Sbjct: 257 KALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAML 316
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA------------------------- 272
DMY K G I DA+ +FN++ ++D+VSW +ML G A
Sbjct: 317 DMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNA 376
Query: 273 ------QHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
Q+G + + F +M L P++VT +C L A + G +D G +KKH
Sbjct: 377 LISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKH 436
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + +D+ + G L++A++ + VW A++GA M+
Sbjct: 437 DINLNCHLATSLLDMYAKCGNLNKAMEVFHAVE-RKDVYVWSAMIGALAMY 486
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 10/286 (3%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYA--RFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
+Q+HA L+ + Y S LL YA + A +F + N WN LI G+A
Sbjct: 89 KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148
Query: 172 RKSEGEKALRTFSEMLREGFE-PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
S+ ++ F ML E P F++ +F A + L G +H VIK+
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
F+ N+L++ Y SG+ + A +VF + +DVVSWN+M+ A GL + F++M
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ PN +T + VL+AC+ L+ G+ + ++ +G +D+ + G ++ A
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDA 328
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPH 395
+M E W +L + +LG Y A IF+ PH
Sbjct: 329 KDLFNKMS-EKDIVSWTTMLDG-----HAKLGNYDEAHCIFDAMPH 368
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 346/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ R VH+ ++ ++DI + N++L YAK G + AR +FD M +D+ +W
Sbjct: 171 CGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSW 230
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY++N A ++F M + GL + TL +L A A K G+ +H + +
Sbjct: 231 NTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSAC-ADLKAVKEGKVIHGYAV 289
Query: 122 KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ ++N + +SL++MY + M DA LF + K+ VSWN++I G+AR + ++L
Sbjct: 290 RNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESL 349
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F M +G P ++ +V A +L G +H++++K G VG LVDMY
Sbjct: 350 RLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMY 409
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K GS+ + +VF+ + + +VSW++M+ G HG G+ + + M N + P+ F
Sbjct: 410 SKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFT 469
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L+ACSHAGL+ EG+ F M+K + V+P +HY VDLLGRAG LD A IR M I
Sbjct: 470 SILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEI 529
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+PT+ +W ALL A R+HKN++L +A+++F+++P +I L+NIYA+ R +D R
Sbjct: 530 KPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERV 589
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M++ G+KK P CS++E N VH F+ D +H Q I+ K E+ +++K+ GY PD+
Sbjct: 590 RAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDT 649
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S V +++ +E L HSE+LA+AFALI+T PG+ I I KN+RVCGDCH+ K S++
Sbjct: 650 SLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISEL 709
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD +RFHHF GFCSCGDYW
Sbjct: 710 TGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 199/376 (52%), Gaps = 4/376 (1%)
Query: 3 THLKKLKEARIVHAHILG-SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
T+ K K+ + +HAH++ S +N+ + + YA CG + +A +FD + +K+ W
Sbjct: 70 TNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLW 129
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY+ N P +++L+ +ML G + + FT VLKA G + GR+VH+ +
Sbjct: 130 NFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVE-IGRRVHSEVV 188
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + ++YVG+SLL MYA+F M A +F + ++ SWN +I+G+A+ ++ A
Sbjct: 189 VCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFL 248
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK-SGGQLVAFVGNTLVDMY 240
F M + G + + +A A ++++GK +H + ++ S G F N+L++MY
Sbjct: 249 VFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMY 308
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ DA ++F R+ +D VSWNSM+ G A++G ++R F +M +G P+QVTF+
Sbjct: 309 CNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFI 368
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC L G + + K G + VD+ + G L + + EMP +
Sbjct: 369 AVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMP-D 427
Query: 361 PTAAVWGALLGACRMH 376
+ W A++ +H
Sbjct: 428 KSLVSWSAMVAGYGLH 443
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 130/262 (49%), Gaps = 10/262 (3%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKP-NQFTLSSV----LKASGAGATDDKFGRQ 115
+ + S +SQ D + + + L + P Q+ L+S+ L S K G+Q
Sbjct: 25 YNSFTSHFSQGDVAQ----MVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQ 80
Query: 116 VHAFCLKYG-YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+HA + + + N Y+ + L YA M A +F + KN WN +I G+A
Sbjct: 81 LHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNG 140
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
K+L + EML G +F+Y V A +E G+ VH+ V+ G + +VGN
Sbjct: 141 LPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGN 200
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+L+ MYAK G + A VF+R+ +RD+ SWN+M++G A++ F+ M + G+
Sbjct: 201 SLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFA 260
Query: 295 NQVTFLCVLTACSHAGLLDEGQ 316
+ T L +L+AC+ + EG+
Sbjct: 261 DCTTLLGLLSACADLKAVKEGK 282
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 357/586 (60%), Gaps = 28/586 (4%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+HL+ L+ + +HA+ L GS +N + + +++ Y C + R++FD M + +
Sbjct: 225 CSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 283
Query: 60 TWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKA---SGAGATDDKFGRQ 115
W A+I+GYSQN+ + A++LF M GL N T++ V+ A SGA F R+
Sbjct: 284 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA------FSRK 337
Query: 116 --VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+H F +K G D + +V ++L+DMY+R ++D A +F +E ++ V+WN +I G+
Sbjct: 338 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 397
Query: 174 SEGEKALRTFSEML-----------REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
E AL +M R +P + ++ + A+ +L +GK +HA+ I
Sbjct: 398 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 457
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K+ VG+ LVDMYAK G ++ + KVF+++ +++V++WN ++ HG G+ +
Sbjct: 458 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 517
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLL 341
M+ G+ PN+VTF+ V ACSH+G++DEG F +MK +GVEP HY VDLL
Sbjct: 518 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 577
Query: 342 GRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
GRAG + A + + MP + A W +LLGA R+H N+E+G AA+ + +L+P+ + +
Sbjct: 578 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 637
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LLANIY+SAG + A R+ MKE GV+KEP CSW+E + VH FVA D +HPQ +
Sbjct: 638 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 697
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK 520
+ E++++ GYVPD+S VL ++ E+E L HSEKLA+AF +++T PG+ I +
Sbjct: 698 GYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 757
Query: 521 KNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+RVC DCH A KF SK+V+REII+RD RFH F++G CSCGDYW
Sbjct: 758 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 184/358 (51%), Gaps = 6/358 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKND-IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L+ ++ + +HAH+ + D + + NT++N Y KCG K+FD + ++ V+W +
Sbjct: 23 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 82
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCL 121
LIS ++ E A+ F ML ++P+ FTL SV+ A + G+QVHA+ L
Sbjct: 83 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 142
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + N ++ ++L+ MY + ++ + L + ++ V+WN +++ + + +AL
Sbjct: 143 RKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 201
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
EM+ EG EP F+ SSV A + L GK +HA+ +K+G +FVG+ LVDMY
Sbjct: 202 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 261
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTF 299
+ +VF+ + R + WN+M+ G +Q+ K + F M + G+ N T
Sbjct: 262 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 321
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
V+ AC +G + + K G++ + T +D+ R G +D A++ +M
Sbjct: 322 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 379
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 136/247 (55%), Gaps = 6/247 (2%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-VYVGSSLLDMYARF 142
M+ LG+KP+ + ++LKA A D + G+Q+HA K+GY + V V ++L+++Y +
Sbjct: 1 MIVLGIKPDNYAFPALLKAV-ADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC 59
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+ +F + +N+VSWN+LI+ + E AL F ML E EP+ F+ SV
Sbjct: 60 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 119
Query: 203 TA---LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
TA L L GK VHA+ ++ G +L +F+ NTLV MY K G + ++ + R
Sbjct: 120 TACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
D+V+WN++L+ Q+ + + +M+ G+ P++ T VL ACSH +L G+
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238
Query: 320 ALMKKHG 326
A K+G
Sbjct: 239 AYALKNG 245
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/551 (42%), Positives = 345/551 (62%), Gaps = 9/551 (1%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F +D + +L+ Y C +ARK FDE+P + V TA+ SGY +N+ ++ LF
Sbjct: 121 FPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFR 180
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGA--TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
+++ G ++ L A A A D +HA +K G D + V +++LD YA
Sbjct: 181 KLIASG-SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYA 239
Query: 141 RFDQMD--DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR--EGFEPTHF 196
+ + D A +F +E K+ VSWN++IA +A+ AL + +ML +
Sbjct: 240 KGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAV 298
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ S++ A A G+++ GK +H V++ G + +VG ++VDMY+K G +E A K F ++
Sbjct: 299 TLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKI 358
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+++++SW++M+TG HG G+ + F +M R+G PN +TF+ VL ACSHAGLLD+G+
Sbjct: 359 KEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGR 418
Query: 317 GYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
++ MKK G+EP HY VDLLGRAG LD A I+EM ++P AA+WGALL ACR+
Sbjct: 419 YWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRI 478
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
HKNVEL +A+R+FELD + G ++LL+NIYA AG D R R ++K G++K P S
Sbjct: 479 HKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYS 538
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
VE K H+F D +HPQ I+ ++ EK+++ GYVP++ VL D++E+ + L
Sbjct: 539 SVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASAL 598
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
+HSEKLA+AFAL+++ PGS IH+ KN+RVC DCH+A K +K+ +REIIVRD RFHHF
Sbjct: 599 HIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHF 658
Query: 556 RDGFCSCGDYW 566
+DG CSCGDYW
Sbjct: 659 KDGSCSCGDYW 669
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 185/343 (53%), Gaps = 17/343 (4%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLD--EARKLFDEMPVKDMVTWTALISGYSQN 71
+HA ++ + D + NT+L+AYAK G D ARK+FD M KD+V+W ++I+ Y+QN
Sbjct: 215 LHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQN 273
Query: 72 DQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+A+ L+ +ML + +K N TLS++L A A A + G+ +H ++ G + NV
Sbjct: 274 GMSADALGLYRKMLNVSGSIKCNAVTLSAILLAC-AHAGTIQTGKCIHNQVVRMGLEENV 332
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
YVG+S++DMY++ +++ A F ++ KN +SW+A+I G+ G++AL F+EM R
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRS 392
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P + ++ SV A + G L++G+ W +A + G + +VD+ ++G +++
Sbjct: 393 GQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDE 452
Query: 249 AEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFE---KMLRNGIAPNQVTFLCVLT 304
A + + +K D W ++L+ C H V E K L A N ++ +
Sbjct: 453 AYGLIKEMKVKPDAAIWGALLSACRIH----KNVELAEISAKRLFELDATNCGYYVLLSN 508
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+ AG+ + + L+K G+E + + V+L GR L
Sbjct: 509 IYAEAGMWKDVERMRVLVKTRGIEKPPGY--SSVELKGRTHLF 549
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H ++ + +H ++ + ++ + ++++ Y+KCG ++ ARK F ++ K++++W
Sbjct: 307 CAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSW 366
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+GY + + A+ +F++M R G PN T SVL A DK +A
Sbjct: 367 SAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKK 426
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIA 168
++G + V ++D+ R +D+A+ L ++ K + + W AL++
Sbjct: 427 RFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLS 474
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/627 (37%), Positives = 366/627 (58%), Gaps = 71/627 (11%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC----LDEARKLFDEMPVKDMVTWTAL 64
K+ HA L S ++ N +++ Y++C L ARK+FD++P KD +WT +
Sbjct: 166 KQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTM 225
Query: 65 ISGYSQND-----------QPEN---------------------AIILFSQMLRLGLKPN 92
++GY +N EN A+ + +M+ G++ +
Sbjct: 226 MTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELD 285
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+FT SV++A A A + G+QVHA+ L+ D++ + +SL+ +Y + + ++A +F
Sbjct: 286 EFTYPSVIRAC-ANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIF 343
Query: 153 TALESKNEVSWNALIAGH-------------------------------ARKSEGEKALR 181
+ +K+ VSWNAL++G+ A GE+ L+
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS M REGFEP +++S + A G+ G+ HA ++K G GN L+ MYA
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYA 463
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E+A++VF + D VSWN+++ QHG G V +E+ML+ GI P+++TFL
Sbjct: 464 KCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLT 523
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSHAGL+D+G+ YF M+ + + P HY +DLL R+G A I +P +
Sbjct: 524 VLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFK 583
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA +W ALL CR+H N+ELG AA+++F L P G ++LL+N+YA+ G+ + AR R
Sbjct: 584 PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVR 643
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M++ GVKKE ACSW+E + VH F+ +D +HP+ ++K +++ ++++++GYVPD+S
Sbjct: 644 KLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTS 703
Query: 481 HVLSYADQQ-EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL + +E L HSEK+A+AF L+ PPG+TI I KN+R CGDCH+ F+F SKV
Sbjct: 704 FVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKV 763
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+R+II+RD RFHHFR+G CSCG++W
Sbjct: 764 VQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 202/477 (42%), Gaps = 104/477 (21%)
Query: 2 CTHLKK--LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM------ 53
C L++ L+ AR VH +I+ F+ + N +++ Y K LD AR+LFDE+
Sbjct: 22 CLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKI 81
Query: 54 -------------------------PV--KDMVTWTALISGYSQNDQPENAIILFSQMLR 86
PV +D V + A+I+G+S N+ +AI LF +M
Sbjct: 82 ARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH 141
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ-- 144
G KP+ FT +SVL D+K Q HA LK G + V ++L+ +Y+R
Sbjct: 142 EGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSP 201
Query: 145 --MDDAWFLFTALESKNEVSW--------------------------------NALIAGH 170
+ A +F + K+E SW NA+I+G+
Sbjct: 202 SLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGY 261
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
++AL M+ G E F+Y SV A A+ L+ GK VHA+V++
Sbjct: 262 VNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFH 321
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS------------------------ 266
F N+LV +Y K G +A +F ++ +D+VSWN+
Sbjct: 322 F-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 267 -------MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
M++G A++G G+ ++ F M R G P F + +C+ G GQ +
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFH 440
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
A + K G + + + + + G+++ A + R MP + + W AL+ A H
Sbjct: 441 AQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-WNALIAALGQH 496
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 183/372 (49%), Gaps = 52/372 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQ--NTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C + + L+ + VHA++L + D + N+++ Y KCG +EAR +F++MP KD+V
Sbjct: 296 CANARLLQLGKQVHAYVLR---REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLV 352
Query: 60 TWTALISGY-------------------------------SQNDQPENAIILFSQMLRLG 88
+W AL+SGY ++N E + LFS M R G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 89 LKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
+P + S +K+ GA + G+Q HA +K G+D ++ G++L+ MYA+ +++
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCN--GQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A +F + + VSWNALIA + G +A+ + EML++G P ++ +V TA +
Sbjct: 471 AQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSH 530
Query: 208 TGSLEQG-KWVHA----HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDV 261
G ++QG K+ ++ + I G A L+D+ +SG +AE + L K
Sbjct: 531 AGLVDQGRKYFNSMETVYRIPPGADHYA----RLIDLLCRSGKFSEAESIIESLPFKPTA 586
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFA 320
W ++L+GC HG + + +K+ G+ P + T++ + + G +E
Sbjct: 587 EIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNMYAATGQWEEVARVRK 644
Query: 321 LMKKHGVEPEEA 332
LM+ GV+ E A
Sbjct: 645 LMRDRGVKKEVA 656
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/610 (37%), Positives = 353/610 (57%), Gaps = 71/610 (11%)
Query: 27 IAMQNTILNAYAKC---GCLDEARKLFDEMPVKDMVTWT--------------------- 62
+++ N ++ Y KC G +ARK+ DEMP KD +TWT
Sbjct: 196 LSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEE 255
Query: 63 ----------ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
A+ISGY Q+ A LF +M+ + P++FT +S+L A A A
Sbjct: 256 IDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSAC-ANAGFFLH 314
Query: 113 GRQVHAFCLKYGYDW----NVYVGSSLLDMYAR----------FDQM------------- 145
G+ VH ++ D+ + V ++L+ +Y++ FD M
Sbjct: 315 GKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILS 374
Query: 146 --------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
D+A +F + K+E+SW +++G+ E AL+ F++M E +P ++
Sbjct: 375 GYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYT 434
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+ A G+L+ GK +HAH+++ G + GN L+ MYA+ G+++DA VF +
Sbjct: 435 YAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP 494
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
D VSWN+M++ QHG G+ + F++M+ GI P++++FL +LTAC+HAGL+D+G
Sbjct: 495 NVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ 554
Query: 318 YFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
YF M++ G+ P E HY +DLLGRAG + A I+ MP EPT A+W A+L CR++
Sbjct: 555 YFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRIN 614
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
++ELGAYAA+++F++ P G +ILL+N Y++AGR DAAR RK+M++ GVKKEP CSW
Sbjct: 615 GDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSW 674
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
+E N VH+F+ D HP +++ + K++++GYVPD+ L E+E L
Sbjct: 675 IEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLF 734
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFR 556
HSE+LA++F L+ P G+T+ + KN+++CGDCH+A F S+ V REI+VRD RFHHF+
Sbjct: 735 AHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFK 794
Query: 557 DGFCSCGDYW 566
DG CSCG+YW
Sbjct: 795 DGECSCGNYW 804
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 20/327 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V I S D+ NTIL+ Y + GCLD A ++F EMP K ++W ++SGY
Sbjct: 353 VATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGL 412
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVG 132
E+A+ LF+QM +KP +T + + A G GA K G+Q+HA ++ G++ + G
Sbjct: 413 AEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGAL--KHGKQLHAHLVQCGFEASNSAG 470
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++LL MYAR + DA +F + + + VSWNA+I+ + G +AL F +M+ +G
Sbjct: 471 NALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIY 530
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVGNTLVDMYAKSGSIE 247
P S+ ++ TA G ++ G + I G A L+D+ ++G I
Sbjct: 531 PDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYA----RLIDLLGRAGRIG 586
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNGIAPNQVTFLCVL 303
+A + + + W ++L+GC +G LG KM + + T++ +
Sbjct: 587 EARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKM----VPEHDGTYILLS 642
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPE 330
S AG + LM+ GV+ E
Sbjct: 643 NTYSAAGRWVDAARVRKLMRDRGVKKE 669
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 51/362 (14%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRL- 87
++++AYA G L ++ FD +PV +D V A+IS +++ A+ +F +L
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 88 -GLKPNQFTLSSVLKASGAGATDD---KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
L+P+ ++ +S+L S G D Q+H K G + V ++L+ +Y + D
Sbjct: 153 DSLRPDDYSFTSLL--SAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCD 210
Query: 144 Q---MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE--------------- 185
DA + + K+E++W ++ GH RK + A F E
Sbjct: 211 APGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISG 270
Query: 186 -----MLREGFE-----------PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
M E FE P F+++S+ +A A+ G GK VH I+ V
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330
Query: 230 A----FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
V N LV +Y+KSG I A K+F+ + +DVVSWN++L+G + G R F+
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M ++++++ +++ H GL ++ F M+ V+P + Y V G G
Sbjct: 391 EMPYK----SELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELG 446
Query: 346 LL 347
L
Sbjct: 447 AL 448
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK + +HAH++ F+ + N +L YA+CG + +AR +F MP D V+W
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
A+IS Q+ A+ LF QM+ G+ P++ + ++L A AG DD F +
Sbjct: 502 NAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGF-----QYF 556
Query: 121 LKYGYDWNVYVG----SSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSE 175
D+ + G + L+D+ R ++ +A L + W A+++G +
Sbjct: 557 ESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGC--RIN 614
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
G+ L ++ P H + L++T S G+WV A ++
Sbjct: 615 GDMELGAYAADQLFKMVPEH---DGTYILLSNTYS-AAGRWVDAARVR 658
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 335/563 (59%), Gaps = 5/563 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++E R +H+ + F QN +++ YAKCGCLDEAR +F+ + + +V+W+A+I
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 68 YSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG-- 124
Y+ + + + A++LF +M G ++PN T + V A G D + GR++HA + G
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGV-IEDLEQGREIHALAMASGEL 119
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
N + ++LL+MY R +++A +F ++ + SW ++I E +AL F
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFH 179
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M EG PT + +SV A A +G+L+ GK +H+ + SG L+DMYAK G
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+E + KVF + R+ VSW +M+ AQHG G + F++M G+ + TF+CVL
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSHAGL+ E +F ++++ + + P E HY +D +GRAG L A + I MP P
Sbjct: 300 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 359
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
W LL ACR+H E AE + +L P DS + LL N+YA+ GR D R RK M
Sbjct: 360 LTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+ G+KK P S++E KN VH FVA D AHP R I + ++ ++++ GYVP++ VL
Sbjct: 420 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 479
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+++E+E + +HSEKLA+AF LI+TPPG+ + I KN+RVC DCH+A K +K++ R
Sbjct: 480 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 539
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I+VRDT+RFHHF DG CSC DYW
Sbjct: 540 IVVRDTHRFHHFEDGQCSCKDYW 562
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK + +H+ + S F + + Q +L+ YAKCG L+ + K+F M ++ V+W
Sbjct: 200 CACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSW 259
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TA+I+ +Q+ Q + A+ LF +M G+ + T VL+A S AG + H+
Sbjct: 260 TAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESL-EFFHSMV 318
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
Y LD R ++ DA L ++ E ++W L+ S+ E+A
Sbjct: 319 EDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERA 378
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+ +E+L + +Y+ + A+TG
Sbjct: 379 TKV-AELLSKLAPEDSMAYTLLGNVYAATG 407
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 337/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK ++ + V +++ S D ++N +L + KCG + +AR+LFDEMP K++++W
Sbjct: 141 CIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G A LF M + ++++AS AG GRQ+H+ L
Sbjct: 201 NTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRAS-AGLGLIFAGRQLHSCSL 259
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V+V +L+DMY++ ++DA +F + K V WN++IAG+A E+AL
Sbjct: 260 KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALS 319
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ EM G + +F++S + A SLE K HA +++ G L LVD+Y+
Sbjct: 320 MYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYS 379
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IEDA+ VF+ + ++V+SWN+++ G HG G V FE+ML G+ PN VTFL
Sbjct: 380 KWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLA 439
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS++GL D G F M + H ++P HY ++LLGR GLLD A I++ P +
Sbjct: 440 VLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFK 499
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT +W ALL ACR+HKN ELG +AAE+++ + P +++L NIY +GRL +AA
Sbjct: 500 PTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVI 559
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ +K G++ PACSW+E K + F++ D H Q I++K E+ +I + GYVP
Sbjct: 560 QTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXK 619
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L D+QE E L HSEKLA+AF LI+T + + I ++ R+CGDCHSA K + V
Sbjct: 620 FLLPDVDEQE-ERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVT 678
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 679 RREIVVRDASRFHHFKDGSCSCGDYW 704
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/575 (40%), Positives = 340/575 (59%), Gaps = 33/575 (5%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ +I N+++ K G + EA KLF+EM KDMV+W+ALISGY QN E A+++F +
Sbjct: 235 QRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIE 294
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M G++ ++ + SVL A A + K G+ +H ++ G + V + ++L+ MY+
Sbjct: 295 MNANGMRLDEVVVVSVLSAC-AHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSG 353
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA------------------------ 179
++ DA LF + +++SWN++I+G + EKA
Sbjct: 354 EIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQ 413
Query: 180 -------LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
L F EM P SV +A +L+QGKWVHA++ K+G ++ +
Sbjct: 414 HDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVIL 473
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G TL+DMY K G +E+A +VFN + ++ V SWN+++ G A +GL + ++ F +M NG+
Sbjct: 474 GTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGV 533
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
PN++TF+ VL AC H GL+DEG+ +FA +++KHG+EP HY VDLLGRAGLL+ A
Sbjct: 534 IPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAE 593
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
K I MP+ P A WGALLGAC+ H + E+G ++ EL P G H+LL+NI+AS G
Sbjct: 594 KLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKG 653
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
D R MMK+ GV K P CS +E VH F+A D HP + E+++++K
Sbjct: 654 DWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLK 713
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
GY PD++ V D++E+E L HSEKLA+AF L++ P + I I KN+R+C DCH+
Sbjct: 714 MEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHT 773
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A K SK REI+VRD +RFH+F++G CSC DYW
Sbjct: 774 AAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 72/388 (18%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H H+L F +D+ +QNT++N YA CG + +ARKLFDE PV D V+W ++++GY +
Sbjct: 163 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 222
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A ++F QM P + N+ +
Sbjct: 223 VEEAKLIFDQM------PQR----------------------------------NIVASN 242
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
S++ + + Q+ +AW LF ++ K+ VSW+ALI+G+ + E+AL F EM G
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 302
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
SV +A A ++ GK +H VI+ G + + N L+ MY+ SG I DA+K+F
Sbjct: 303 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF 362
Query: 254 NRLLKRDVVSWNSMLTGC-------------------------------AQHGLGKATVR 282
N D +SWNSM++GC AQH T+
Sbjct: 363 NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLA 422
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
F +M I P++ + V++AC+H LD+G+ A ++K+G++ T +D+
Sbjct: 423 LFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYM 482
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G ++ AL+ M E + W AL+
Sbjct: 483 KCGCVENALEVFNGME-EKGVSSWNALI 509
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 175/361 (48%), Gaps = 39/361 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL +K +++H ++ ++ + +QN +++ Y+ G + +A+KLF+ D ++W
Sbjct: 314 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISW 373
Query: 62 T-------------------------------ALISGYSQNDQPENAIILFSQMLRLGLK 90
A+ISGY+Q+D + LF +M ++
Sbjct: 374 NSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIR 433
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ L SV+ A A D+ G+ VHA+ K G NV +G++LLDMY + +++A
Sbjct: 434 PDETILVSVISACTHLAALDQ-GKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALE 492
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F +E K SWNALI G A E++L FSEM G P ++ V A G
Sbjct: 493 VFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGL 552
Query: 211 LEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+++G+ A +I+ G V G +VD+ ++G + +AEK+ + + DV +W ++
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYG-CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL 611
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHG 326
L C +HG + R K++ + P+ F +L+ + G ++ +MK+ G
Sbjct: 612 LGACKKHGDTEMGERVGRKLIE--LQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 669
Query: 327 V 327
V
Sbjct: 670 V 670
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 16/270 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTHL L + + VHA+I + K ++ + T+L+ Y KCGC++ A ++F+ M K + +W
Sbjct: 446 CTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSW 505
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G + N E ++ +FS+M G+ PN+ T VL A D+ +
Sbjct: 506 NALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIE 565
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG---HARKSEGE 177
K+G + NV ++D+ R +++A L ++ +V +W AL+ H GE
Sbjct: 566 KHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGE 625
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE-----QGKWVHAHVIKSGGQLVAFV 232
+ R E L+ + H S++F AS G E +G V+K+ G +
Sbjct: 626 RVGRKLIE-LQPDHDGFHVLLSNIF---ASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 681
Query: 233 GNTLVDMYAKSGS---IEDAEKVFNRLLKR 259
+ + A + I E + N + KR
Sbjct: 682 NGVVHEFLAGDKTHPWINKVEGMLNEMAKR 711
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMY--ARFDQMDDAWFLFTALESKNEVSWNALIA 168
+F R + L G+ + + S LL + F +D + +F +E+ N WN ++
Sbjct: 56 QFNRILSQMILT-GFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 114
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ + + EKAL + M++ P +++Y V A A GK +H HV+K G
Sbjct: 115 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDS 174
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM- 287
+V NTL++MYA G++ DA K+F+ D VSWNS+L G + G + F++M
Sbjct: 175 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMP 234
Query: 288 LRNGIAPNQVTFL 300
RN +A N + L
Sbjct: 235 QRNIVASNSMIVL 247
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/556 (41%), Positives = 345/556 (62%), Gaps = 6/556 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + + D ++ +++N Y KCG +D A K+FD++P K+ +WTA ISGY +
Sbjct: 130 MHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGK 189
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
AI +F ++L +GL+P+ F+L VL A D + G + + + G NV+V +
Sbjct: 190 CREAIDMFRRLLEMGLRPDSFSLVEVLSACKR-TGDLRSGEWIDEYITENGMVRNVFVAT 248
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D Y + M+ A +F + KN VSW+++I G+A ++AL F +ML EG +P
Sbjct: 249 ALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKP 308
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV--AFVGNTLVDMYAKSGSIEDAEK 251
++ V + A G+LE G W A + +G + + + +G L+DMYAK G ++ A +
Sbjct: 309 DCYAMVGVLCSCARLGALELGDW--ASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWE 366
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF + K+D V WN+ ++G A G K + F +M ++GI P++ TF+ +L AC+HAGL
Sbjct: 367 VFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGL 426
Query: 312 LDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++EG+ YF M+ + PE HY VDLLGRAG LD A + I+ MP+E A VWGALL
Sbjct: 427 VEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALL 486
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
G CR+H++ +L +++ L+P SG ++LL+NIYA++ + +AA+ R +M E GVKK
Sbjct: 487 GGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKK 546
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P SW+E VH F+ D +HP I+ K E+++ +K GYVP + HVL +++E
Sbjct: 547 IPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEE 606
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E + HSEKLA+AF LIST P I + KN+RVCGDCH A K S++ REIIVRD N
Sbjct: 607 KEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNN 666
Query: 551 RFHHFRDGFCSCGDYW 566
RFH F DG CSC DYW
Sbjct: 667 RFHCFTDGLCSCKDYW 682
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 2/373 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
LK + +HA +L D + N +L G + + ++ D+ ++ + +I G
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
ND + +I ++ M + GL P+ FT VLKA A D + G ++H+ +K G +
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKAC-ARVLDSELGVKMHSLVVKAGCEA 141
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V SL+++Y + +D+A+ +F + KN SW A I+G+ + +A+ F +L
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P FS V +A TG L G+W+ ++ ++G FV LVD Y K G++E
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNME 261
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A VF+ +L++++VSW+SM+ G A +GL K + F KML G+ P+ + VL +C+
Sbjct: 262 RARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
G L+ G L+ + +D+ + G +DRA + R M + VW
Sbjct: 322 RLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR-KKDRVVWN 380
Query: 368 ALLGACRMHKNVE 380
A + M +V+
Sbjct: 381 AAISGLAMSGHVK 393
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 142/276 (51%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + +I + ++ + +++ Y KCG ++ AR +FD M K++V+W
Sbjct: 219 CKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSW 278
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++I GY+ N P+ A+ LF +ML GLKP+ + + VL S A + G
Sbjct: 279 SSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVL-CSCARLGALELGDWASNLIN 337
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N +G++L+DMYA+ +MD AW +F + K+ V WNA I+G A + AL
Sbjct: 338 GNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALG 397
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK--WVHAHVIKSGGQLVAFVGNTLVDM 239
F +M + G +P ++ + A G +E+G+ + + + + G +VD+
Sbjct: 398 LFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYG-CMVDL 456
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G +++A ++ + ++ + + W ++L GC H
Sbjct: 457 LGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/555 (40%), Positives = 345/555 (62%), Gaps = 3/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + +++ DI + N +L+ Y+K +D A+ LFDEMP D V++ +I+GY+ N Q
Sbjct: 266 IHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQ 325
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E + LF ++ F +++L + A + GRQ HA + V VG+
Sbjct: 326 YEKSFDLFKRLQGTSFDRKNFPFATMLSVA-AIELNLSMGRQTHAQAVVTTAVSEVQVGN 384
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMYA+ ++ +DA +F L +N V W A+I+ + +K E+AL+ F EM RE
Sbjct: 385 ALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHG 444
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+++S A A+ S+ GK +H+ VI+ G F G+ LVDMYA GS++DA +VF
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ R++V WN++++ +Q+G +AT F M+ +G+ P+ V+FL VLTACSH GL++
Sbjct: 505 KEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVE 564
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ YF M + + ++P HY T +D+L R+G + A I EMP EP +W ++L +
Sbjct: 565 KALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNS 624
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+HKN +L AA+++F++D D+ ++ ++NIYA AG+ +AA+ +K M+E GVKK
Sbjct: 625 CRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKV 684
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
A SWVE + VH+F AND HPQ I +K + E + + GY PD+S L D++ +
Sbjct: 685 TAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMK 744
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L+ HSE+LA+AFALI+TP GS I I KN+R C DCH+A K SK+V REI VRD++R
Sbjct: 745 IESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSR 804
Query: 552 FHHFRDGFCSCGDYW 566
FHHFRDG CSCGDYW
Sbjct: 805 FHHFRDGSCSCGDYW 819
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 199/373 (53%), Gaps = 2/373 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
LKE +H+HI+ F + + N+++++Y K CLD A +LF EMP KD V++ +I+G
Sbjct: 159 LKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITG 218
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++ E A+ LF QM + +P+ FT +++L S G+ D FG+Q+H +K Y W
Sbjct: 219 YTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMS-VGSEDVIFGQQIHGLAIKTSYVW 277
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++V ++LLD Y++ D +D A LF + + VS+N +I G+A + EK+ F +
Sbjct: 278 DIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQ 337
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
F+ +F ++++ + A +L G+ HA + + VGN LVDMYAK E
Sbjct: 338 GTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFE 397
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DA ++F L R+ V W ++++ Q G + ++ F++M R + +Q TF L A +
Sbjct: 398 DANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASA 457
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+ + G+ + + + G+ VD+ G + A++ +EMP + W
Sbjct: 458 NLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWN 516
Query: 368 ALLGACRMHKNVE 380
AL+ A + + E
Sbjct: 517 ALISAYSQNGDAE 529
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 206/437 (47%), Gaps = 44/437 (10%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++ Y K L AR+LF+ M ++ V+WT +I GYSQN+QP+ A L+++M R G+K
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+ T +++L T K Q+H+ +++G+ ++ V +SL+D Y + +D A
Sbjct: 141 PDHITFATLLSGFD-DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQ 199
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF+ + +K+ VS+N +I G+ + E+AL+ F +M F+P+ F+++++ +
Sbjct: 200 LFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSED 259
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+ G+ +H IK+ FV N L+D Y+K I+ A+ +F+ + + D VS+N ++TG
Sbjct: 260 VIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-----------SHA---------- 309
A +G + + F+++ F +L+ +HA
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379
Query: 310 -----GLLD---------EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
L+D + FA + P + + + + G + ALK +
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYRNSVP----WTAIISIYVQKGFHEEALKMFK 435
Query: 356 EMPIEPT---AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG-PHILLANIYASAG 411
EM E A + + L A +V LG + L S +L ++YA+ G
Sbjct: 436 EMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCG 495
Query: 412 RLNDAARARKMMKESGV 428
+ DA K M + +
Sbjct: 496 SMKDAIEVFKEMPDRNI 512
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 125 YDWNVYVGSSLLDM----YARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+D Y +S ++M Y + + A LF ++ S+NEVSW +I G+++ ++ ++A
Sbjct: 69 FDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAF 128
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
++EM R G +P H +++++ + T +L++ +H+H+I+ G V N+LVD Y
Sbjct: 129 NLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSY 188
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K+ ++ A ++F+ + +D VS+N M+TG ++G + ++ F +M P+ TF
Sbjct: 189 CKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFA 248
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+L + + GQ L K + +D + +D A EMP
Sbjct: 249 AMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 21/225 (9%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L K + ++ +L S F + +++ YA CG + +A ++F EMP +++V W AL
Sbjct: 464 LGKQLHSSVIRLGLLSSVFSGSV-----LVDMYANCGSMKDAIEVFKEMPDRNIVCWNAL 518
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
IS YSQN E F+ M+ GL P+ + SVL A +K ++ Y
Sbjct: 519 ISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYK 578
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGEKAL 180
D ++++D+ R + ++A L + + +EV W++++ H + +KA
Sbjct: 579 LDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAA 638
Query: 181 RTFSEM--LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+M LR+ + + S+++ E GKW +A +K
Sbjct: 639 DQLFKMDALRDA--AAYVNMSNIYA--------EAGKWENAAKVK 673
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/623 (37%), Positives = 356/623 (57%), Gaps = 71/623 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWT-------- 62
+H +L S +++ N ++ Y KC + +ARK+ DEMP KD +TWT
Sbjct: 187 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 246
Query: 63 -----------------------ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV 99
A+ISGY Q+ +A LF +M+ + ++FT +SV
Sbjct: 247 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 306
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDW----NVYVGSSLLDMYAR----------FDQM 145
L A A A G+ VH ++ ++ + V ++L+ +Y++ FD M
Sbjct: 307 LSAC-ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 365
Query: 146 ---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D A +F + KN++SW +++G+ E AL+ F+
Sbjct: 366 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 425
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M E +P ++Y+ A G+L+ G+ +HAH+++ G + GN L+ MYAK G
Sbjct: 426 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 485
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ DA VF + D VSWN+M++ QHG G+ + F++M+ GI P++++FL +LT
Sbjct: 486 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 545
Query: 305 ACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC+HAGL+DEG YF MK+ G+ P E HY +DLLGR+G + A I+ MP EPT
Sbjct: 546 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 605
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
++W A+L CR + ++E GAYAA+++F + P G +ILL+N Y++AGR DAAR RK+M
Sbjct: 606 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLM 665
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
++ GVKKEP CSW+E + +H+F+ D HP+ +++ I +++++GYVPD+ VL
Sbjct: 666 RDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVL 725
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ E+E L HSEKLA+ F L+ PPG+T+ + KN+R+CGDCH+A F SK V RE
Sbjct: 726 HDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGRE 785
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I+VRD RFHHF+DG CSCG+YW
Sbjct: 786 IVVRDVRRFHHFKDGECSCGNYW 808
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 164/325 (50%), Gaps = 14/325 (4%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
++ I + D+ NTIL+ Y GCLD+A ++F MP K+ ++W ++SGY
Sbjct: 356 VIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 415
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYV 131
E+A+ LF+QM +KP +T + + A G GA K GRQ+HA ++ G++ +
Sbjct: 416 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL--KHGRQLHAHLVQCGFEASNSA 473
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G++LL MYA+ ++DA +F + + + VSWNA+I+ + G +AL F +M+ EG
Sbjct: 474 GNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGI 533
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-----LVDMYAKSGSI 246
+P S+ ++ TA G +++G H +S + L+D+ +SG I
Sbjct: 534 DPDRISFLTILTACNHAGLVDEG----FHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 589
Query: 247 EDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+A + + S W ++L+GC +G + +++ R I + T++ +
Sbjct: 590 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRM-IPQHDGTYILLSNT 648
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPE 330
S AG + LM+ GV+ E
Sbjct: 649 YSAAGRWVDAARVRKLMRDRGVKKE 673
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 169/389 (43%), Gaps = 57/389 (14%)
Query: 12 RIVHAHILGSAFKNDIAM-----------QNTILNAYAKCGCLDEARKLFDEMPV--KDM 58
R++H + L A+ +++ A+A G L +A FD +P +D
Sbjct: 68 RLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDT 127
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGAT-DDKFGRQV 116
V A++S +++ A+ +F +L G L+P+ ++ ++++ A G Q+
Sbjct: 128 VLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQL 187
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW--------------------------- 149
H LK G + V ++L+ +Y + D + +W
Sbjct: 188 HCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRR 247
Query: 150 -------FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+F ++ K +V WNA+I+G+ + A F M+ E F+++SV
Sbjct: 248 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 307
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVA----FVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
+A A+ G GK VH +I+ V V N LV +Y+K G I A+++F+ +
Sbjct: 308 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 367
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+DVVSWN++L+G G V F+ M N ++++ +++ H GL ++
Sbjct: 368 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKL 423
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
F M+ V+P + Y + G G L
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGAL 452
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK R +HAH++ F+ + N +L YAKCG +++AR +F MP D V+W
Sbjct: 446 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 505
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
A+IS Q+ A+ LF QM+ G+ P++ + ++L A AG D+ F H F
Sbjct: 506 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF----HYF- 560
Query: 121 LKYGYDWNVYVG----SSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSE 175
D+ + G + L+D+ R ++ +A L + + S W A+++G +
Sbjct: 561 ESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGD 620
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
E ++ R P H + L++T S G+WV A ++
Sbjct: 621 MEFGAYAADQLFR--MIPQH---DGTYILLSNTYS-AAGRWVDAARVR 662
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 342/568 (60%), Gaps = 15/568 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + ++++ +LG+A +L+ YAKCG L AR++FD MP ++ VTW
Sbjct: 258 CLHSNRNSKSKLTDGVLLGTA----------LLDMYAKCGSLLYARRVFDAMPARNEVTW 307
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD--KFGRQVHAF 119
+ALI G+ + A +LF ML GL + +S+ A A A+ D + G Q+HA
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLHAL 365
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G ++ G+SLL MYA+ +D A LF + K+ VS++AL++G+ + E+A
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M EP + S+ A + +L+ G+ H VI G + N L+DM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+ + +VFN + RD+VSWN+M+ G HGLGK F +M G P+ VTF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+C+L+ACSH+GL+ EG+ +F +M+ +G+ P HY+ VDLL R G LD A +FI+ MP
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ VW ALLGACR++KN++LG + I EL P +G +LL+NIY++AGR ++AA
Sbjct: 606 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R + K G KK P CSW+E ++H FV D +HPQ I+++ I IK++GY PD
Sbjct: 666 VRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPD 725
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S VL +++E+E L HSEKLA+A+ ++S TI + KN+RVCGDCH+ K S
Sbjct: 726 TSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISL 785
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ R IIVRD NRFHHF++G CSCGD+W
Sbjct: 786 LKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 202/410 (49%), Gaps = 28/410 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L R +H H + + + D+ + +L+ Y KC CL +A +F MP +D+V W
Sbjct: 135 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 194
Query: 62 TALISGYSQNDQPENAI--ILFSQMLRLGLKPNQFTLSSVLK---ASGAGATDDKFGRQV 116
A+++GY+ + +A+ +L QM L+PN TL ++L GA A G V
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ----GTSV 250
Query: 117 HAFCLKYGYDWN----------VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
HA+ ++ N V +G++LLDMYA+ + A +F A+ ++NEV+W+AL
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 167 IAGHARKSEGEKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
I G S +A F ML +G PT S +S A AS L G+ +HA + K
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 368
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
SG GN+L+ MYAK+G I+ A +F+ + +D VS++++++G Q+G +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F+KM + P+ T + ++ ACSH L G+ + G+ E + +D+ +
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
G +D + + MP + W ++ +H LG A E++
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGKEATALFLEMN 534
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 20/341 (5%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA--IILFSQMLRLGLKPNQFTLSS 98
G L A LFD++P D+ T+ LI YS + A + L+ +MLR + PN +T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 99 VLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK 158
LKA A A D GR +H + G +++V ++LLDMY + + DA +F + ++
Sbjct: 131 ALKACSALA-DHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 159 NEVSWNALIAGHARKSEGEKALRTF--SEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+ V+WNA++AG+A A+ +M P + ++ LA G+L QG
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 217 VHAHVIK--------SGGQLV--AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
VHA+ I+ S +L +G L+DMYAK GS+ A +VF+ + R+ V+W++
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNG---IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++ G F+ ML G ++P + L AC+ L G+ AL+
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLA 367
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
K GV + + + + +AGL+D+A+ EM ++ T +
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 408
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA--LRTFSEMLREGFEPTHFSYSSV 201
+ A LF + S + ++N LI ++ S A L + MLR P ++++
Sbjct: 72 HLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFA 131
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
A ++ G+ +H H I +G Q FV L+DMY K + DA +F + RD+
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 262 VSWNSMLTGCAQHGLGKATVRWF--EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
V+WN+ML G A HG+ V +M + + PN T + +L + G L +G
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 320 ALMKK---HGVEPEEAHY-------VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
A + H ++ +D+ + G L A + MP W AL
Sbjct: 252 AYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWSAL 310
Query: 370 LG 371
+G
Sbjct: 311 IG 312
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/568 (41%), Positives = 341/568 (60%), Gaps = 15/568 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + ++++ +LG+A +L+ YAKCG L AR++FD MP ++ VTW
Sbjct: 258 CLHPNRNSKSKLTDGVLLGTA----------LLDMYAKCGSLLYARRVFDAMPARNEVTW 307
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD--KFGRQVHAF 119
+ALI G+ + A +LF ML GL + +S+ A A A+ D + G Q+HA
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLHAL 365
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G ++ G+SLL MYA+ +D A LF + K+ VS++AL++G+ + E+A
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F +M EP + S+ A + +L+ G+ H VI G + N L+DM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+ + +VFN + RD+VSWN+M+ G HGLGK F +M G P+ VTF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+C+L+ACSH+GL+ EG+ +F +M +G+ P HY+ VDLL R G LD A +FI+ MP
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ VW ALLGACR++KN++LG + I EL P +G +LL+NIY++AGR ++AA
Sbjct: 606 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R + K G KK P CSW+E ++H FV D +HPQ I+++ I IK++GY PD
Sbjct: 666 VRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPD 725
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S VL +++E+E L HSEKLA+A+ ++S TI + KN+RVCGDCH+ K S
Sbjct: 726 TSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISL 785
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V R IIVRD NRFHHF++G CSCGD+W
Sbjct: 786 VKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 203/410 (49%), Gaps = 28/410 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L R +H H + + + D+ + +L+ Y KC CL +A +F MP +D+V W
Sbjct: 135 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 194
Query: 62 TALISGYSQNDQPENAI--ILFSQMLRLGLKPNQFTLSSVLK---ASGAGATDDKFGRQV 116
A+++GY+ + +A+ +L QM L+PN TL ++L GA A G V
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ----GTSV 250
Query: 117 HAFCLKYGYDWN----------VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
HA+C++ N V +G++LLDMYA+ + A +F A+ ++NEV+W+AL
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 167 IAGHARKSEGEKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
I G S +A F ML +G PT S +S A AS L G+ +HA + K
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 368
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
SG GN+L+ MYAK+G I+ A +F+ + +D VS++++++G Q+G +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F+KM + P+ T + ++ ACSH L G+ + G+ E + +D+ +
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
G +D + + MP + W ++ +H LG A E++
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGKEATALFLEMN 534
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 20/341 (5%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA--IILFSQMLRLGLKPNQFTLSS 98
G L A LFD++P D+ T+ LI YS + A + L+ +MLR + PN +T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 99 VLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK 158
LKA A A D GR +H + G +++V ++LLDMY + + DA +F + ++
Sbjct: 131 ALKACSALA-DHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 159 NEVSWNALIAGHARKSEGEKALRTF--SEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+ V+WNA++AG+A A+ +M P + ++ LA G+L QG
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 217 VHAHVIK--------SGGQLV--AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
VHA+ I+ S +L +G L+DMYAK GS+ A +VF+ + R+ V+W++
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNG---IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++ G F+ ML G ++P + L AC+ L G+ AL+
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLA 367
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
K GV + + + + +AGL+D+A+ EM ++ T +
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 408
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 15/242 (6%)
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA--LRTFSEMLREGFEPTHFSYSSV 201
+ A LF + S + ++N LI ++ S A L + MLR P ++++
Sbjct: 72 HLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFA 131
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
A ++ G+ +H H I +G Q FV L+DMY K + DA +F + RD+
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 262 VSWNSMLTGCAQHGLGKATVRWF--EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
V+WN+ML G A HG+ V +M + + PN T + +L + G L +G
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 320 ALMKKHGVEPEEAHY----------VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
A + + P +D+ + G L A + MP W AL
Sbjct: 252 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWSAL 310
Query: 370 LG 371
+G
Sbjct: 311 IG 312
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 342/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L +V G+ + NDI + +++LN YAKCG +D+A K+FD M +D VTW
Sbjct: 113 CARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTW 172
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +++G+ QP AI ++ +M R GL+ ++ + V++A A D + G VH + L
Sbjct: 173 STMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATG-DARMGASVHGYLL 231
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++ +V + +SL+DMYA+ D A +F + +N+VSW+ALI+ A+ ++AL
Sbjct: 232 RHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALG 291
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G P A + G L+ GK +H ++++ +L VG ++DMY+
Sbjct: 292 LFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTL-ELDRMVGTAVIDMYS 350
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A+ +F++++ RD++SWN M+ C HG G+ + F++M RN + P+ TF
Sbjct: 351 KCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFAS 410
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL++EG+ +F M ++G+EP E H V VDLL R+GL++ A + + +
Sbjct: 411 LLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSK 470
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT ++ ALL C + +ELG AE+I EL P D G L++N+YA+A R
Sbjct: 471 PTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVR 530
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ G KK P CS +E + A+H FV D +HPQ I + ++ +++++GY+P +
Sbjct: 531 KLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTE 590
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V ++ +E L HSE+LA AF L++T PG+ + + KN+RVCGDCH A K+ SK+
Sbjct: 591 FVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIA 650
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD RFHHF+DG CSCGDYW
Sbjct: 651 DREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 7/273 (2%)
Query: 131 VGSSLLDMYARFDQMDDA-WFLFTALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLR 188
+ S L YAR + A L TA S + + +WNAL+A H+R + +ALR F L
Sbjct: 38 LSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-RALP 96
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
P +++ +A A G L G+ V +G FV ++++++YAK G+++D
Sbjct: 97 PAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDD 156
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A KVF+R+ KRD V+W++M+TG G + + +M R+G+ ++V + V+ AC+
Sbjct: 157 AVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAA 216
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G G + +H ++ + + VD+ + GL D+A + MP + W A
Sbjct: 217 TGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVS-WSA 275
Query: 369 LLGACRMHKNVE--LGAYAAERIFELDPHDSGP 399
L+ + N + LG + ++ L P +SGP
Sbjct: 276 LISQLAQYGNADEALGLFRMMQVSGLHP-NSGP 307
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 336/560 (60%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + R VH ++ + N ++ Y+ LD+A LFD M V+D V+W+ ++ G
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+++ N F +++R G +P+ +TL V++A + + GR +H K+G D
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRAC-RDLKNLQMGRLIHHIVYKFGLDL 869
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V ++L+DMY + +++DA FLF + ++ V+W +I G+A ++L F +M
Sbjct: 870 DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P + +V A A G++ + + + ++ + QL +G ++DM+AK G +E
Sbjct: 930 EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A ++F+R+ +++V+SW++M+ HG G+ + F MLR+GI PN++T + +L ACS
Sbjct: 990 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049
Query: 308 HAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
HAGL++EG +F+ M + + V + HY VDLLGRAG LD ALK I M E +W
Sbjct: 1050 HAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLW 1109
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GA LGACR HK+V L AA + EL P + G +ILL+NIYA+AGR D A+ R +M +
Sbjct: 1110 GAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQR 1169
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
+KK P +W+E N H F D HP+ I++ + + K++ +GYVPD++ VL
Sbjct: 1170 RLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDV 1229
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D++ + L HSEKLA+AF LI+TP + I I KN+RVCGDCH+ K S + R IIV
Sbjct: 1230 DEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIV 1289
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFHHF++G CSCGDYW
Sbjct: 1290 RDANRFHHFKEGACSCGDYW 1309
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 308/520 (59%), Gaps = 2/520 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + R VHA +I + N ++ Y+ LD+A LFD M V+D V+W+ ++
Sbjct: 73 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 132
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G+++ N F +++R G +P+ +TL V++A + + GR +H K+G
Sbjct: 133 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC-RDLKNLQMGRLIHHIVYKFGL 191
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D + +V ++L+DMY + +++DA FLF ++ ++ V+W +I G+A + ++L F +
Sbjct: 192 DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 251
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M EG P + +V A A G++ + + + ++ + QL +G ++DMYAK G
Sbjct: 252 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 311
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+E A ++F+R+ +++V+SW++M+ HG G+ + F ML +G+ P+++T +L A
Sbjct: 312 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYA 371
Query: 306 CSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSHAGL++EG +F+ M + + V + HY VDLLGRAG LD ALK I+ M IE
Sbjct: 372 CSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEG 431
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
+WGA LGACR HK+V L AA + EL + G ++LL+NIYA+AGR D A+ R +M
Sbjct: 432 LWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMS 491
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
+ +KK P +W+E N H F D HP+ I++ + +S K++ +GYVPD++ VL
Sbjct: 492 QRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLH 551
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
D++ + L HSEKLA+AF LI+TP + I I KN+R
Sbjct: 552 DVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 144/275 (52%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L+ R++H + D + +++ Y KC +++AR LFD+M +D+VTW
Sbjct: 170 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTW 229
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I GY++ + +++LF +M G+ P++ + +V+ A K R + +
Sbjct: 230 TVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHK-ARIIDDYIQ 288
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + +V +G++++DMYA+ ++ A +F +E KN +SW+A+IA + +G KAL
Sbjct: 289 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 348
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F ML G P + +S+ A + G +E+G + + + T +VD+
Sbjct: 349 LFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLL 408
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G +++A K+ + +++D W + L C H
Sbjct: 409 GRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTH 443
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 142/275 (51%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L+ R++H + D + +++ Y KC +++AR LFD+M +D+VTW
Sbjct: 846 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTW 905
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I GY++ +++LF +M G+ P++ + +V+ A K R + +
Sbjct: 906 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHK-ARTIDDYIQ 964
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + +V +G++++DM+A+ ++ A +F +E KN +SW+A+IA + +G KAL
Sbjct: 965 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 1024
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F MLR G P + S+ A + G +E+G + + + T +VD+
Sbjct: 1025 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLL 1084
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G +++A K+ + ++D W + L C H
Sbjct: 1085 GRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH 1119
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +ARI+ +I F+ D+ + +++ YAKCGC++ AR++FD M K++++W
Sbjct: 271 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 330
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ Y + Q A+ LF ML G+ P++ TL+S+L A ++ R +
Sbjct: 331 SAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWE 390
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
Y +V + ++D+ R ++D+A L ++ K+E W A + H E
Sbjct: 391 DYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAE 450
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
KA + E+ + P H+ L S G+W
Sbjct: 451 KAATSLLELQSQ--NPGHY-------VLLSNIYANAGRW 480
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +AR + +I F+ D+ + +++ +AKCGC++ AR++FD M K++++W
Sbjct: 947 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 1006
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ Y + Q A+ LF MLR G+ PN+ TL S+L A ++ R
Sbjct: 1007 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE 1066
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
Y +V + ++D+ R ++D+A L ++ K+E W A + H E
Sbjct: 1067 DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAE 1126
Query: 178 KALRTFSEMLREGFEPTHF 196
KA + E+ + P H+
Sbjct: 1127 KAATSLLELQPQ--NPGHY 1143
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L Q + VH G V N LV Y+ +++DA +F+ + RD VSW+ M+
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
G A+ G F +++R G P+ T V+ AC L G+ ++ K G++
Sbjct: 810 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ VD+ G+ ++ A +F+ + E W ++G
Sbjct: 870 DHFVCAALVDMYGKCREIEDA-RFLFDKMXERDLVTWTVMIGG 911
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
+AL + +L Q + VHA G V N L+ Y+ +++DA +F+ + RD
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
VSW+ M+ G A+ G F +++R G P+ T V+ AC L G+ +
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ K G++ + VD+ + ++ A +F+ + E W ++G
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDA-RFLFDKMQERDLVTWTVMIGG 235
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 338/542 (62%), Gaps = 2/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ + N++L+ Y+KC CLD+ R+LFDEMP +D V++ +I+ Y+ N + LF +M
Sbjct: 468 NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ 527
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+LG +++L +G+ D G+Q+HA + G +G++L+DMY++ +
Sbjct: 528 KLGFDRQVLPYATMLSVAGS-LPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 586
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D A F+ K+ +SW ALI G+ + + E+AL+ FS+M R G P ++SS+ A
Sbjct: 587 DAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKAS 646
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+S + G+ +H+++I+SG + F G+ LVDMYAK G +++A + F+ + +R+ +SWN
Sbjct: 647 SSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWN 706
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-K 324
++++ A +G K ++ FE ML G P+ VTFL VL ACSH GL DE YF LMK +
Sbjct: 707 AVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQ 766
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ + P + HY +D LGR G + K + EMP + +W ++L +CR+H N EL
Sbjct: 767 YSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV 826
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+++F ++P D+ P+++L+NIYA AG+ DAA +K+M++ GV+KE SWVE K ++
Sbjct: 827 AADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIY 886
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F +ND P I + + +++ + GY PD + L D + + L+ HSE+LA+
Sbjct: 887 SFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAI 946
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AFAL++TP G+ I I KN+ C DCH+ K SK+V R+IIVRD+ RFHHF+DG CSCGD
Sbjct: 947 AFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGD 1006
Query: 565 YW 566
YW
Sbjct: 1007 YW 1008
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 18/342 (5%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+AY K G L AR++F EM KD VT+ A++ G S+ A+ LF+ M R G
Sbjct: 388 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYS 447
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ L L+ S + + NV+V +SLLD Y++ D +DD
Sbjct: 448 RHPLHL---LQYSHSRSRSTSV--------------LNVFVNNSLLDFYSKCDCLDDMRR 490
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + ++ VS+N +IA +A LR F EM + GF+ Y+++ + S
Sbjct: 491 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 550
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+ GK +HA ++ G +GN L+DMY+K G ++ A+ F+ ++ +SW +++TG
Sbjct: 551 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 610
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q+G + ++ F M R G+ P++ TF ++ A S ++ G+ + + + G +
Sbjct: 611 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 670
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
VD+ + G LD AL+ EMP E + W A++ A
Sbjct: 671 VFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 711
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 170/324 (52%), Gaps = 8/324 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ ++ + N +++ Y+KCG LD A+ F K ++WTALI+GY QN Q
Sbjct: 557 IHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 616
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ LFS M R GL+P++ T SS++KAS + A GRQ+H++ ++ GY +V+ GS
Sbjct: 617 HEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG-LGRQLHSYLIRSGYKSSVFSGS 675
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+DMYA+ +D+A F + +N +SWNA+I+ +A E + A++ F ML GF P
Sbjct: 676 VLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNP 735
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEK 251
++ SV A + G L + H++K + + + ++D + G +K
Sbjct: 736 DSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 794
Query: 252 VFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHA 309
+ + K D + W S+L C HG + +K+ G+ P T +L+ + A
Sbjct: 795 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GMEPTDATPYVILSNIYARA 852
Query: 310 GLLDEGQGYFALMKKHGVEPEEAH 333
G ++ +M+ GV E +
Sbjct: 853 GQWEDAACVKKIMRDRGVRKESGY 876
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 165/340 (48%), Gaps = 23/340 (6%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N IL+AY+ G L A+ LF P ++ TWT ++ ++ + +A+ LF ML G+
Sbjct: 292 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 351
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+++VL G +H F +K+G D +V+V ++LLD Y + + A
Sbjct: 352 PDRVTVTTVLNLPGCTVP------SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 405
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + K+ V++NA++ G +++ +AL+ F+ M R G+ S
Sbjct: 406 VFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGY---------------SRHP 450
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L ++ H+ +S L FV N+L+D Y+K ++D ++F+ + +RD VS+N ++
Sbjct: 451 LHLLQYSHSRS-RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAA 509
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A + +R F +M + G + + +L+ + G+ A + G+ E
Sbjct: 510 YAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE 569
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ +D+ + G+LD A E +A W AL+
Sbjct: 570 DLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALI 608
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 9/214 (4%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H++++ S +K+ + + +++ YAKCGCLDEA + FDEMP ++ ++W A+IS Y+
Sbjct: 656 RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHY 715
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD-WNVY 130
+ +NAI +F ML G P+ T SVL A D+ + H +Y W +
Sbjct: 716 GEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEH 775
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ ++D R + + K + + W +++ H+ + G + L +
Sbjct: 776 Y-ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL--HSCRIHGNQELARVAADKLF 832
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
G EPT + + + + + G+W A +K
Sbjct: 833 GMEPTDATPYVILSNIYA----RAGQWEDAACVK 862
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++ + +L Y+ + A LF + +N +W ++ HA AL F ML
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 346
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P + ++V T +H IK G FV NTL+D Y K G +
Sbjct: 347 GEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 401
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A +VF + +D V++N+M+ GC++ GL ++ F M R G + + + L
Sbjct: 402 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLL 454
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 357/586 (60%), Gaps = 28/586 (4%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+HL+ L+ + +HA+ L GS +N + + +++ Y C + R++FD M + +
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 60 TWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKA---SGAGATDDKFGRQ 115
W A+I+GYSQN+ + A++LF M GL N T++ V+ A SGA F R+
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA------FSRK 424
Query: 116 --VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+H F +K G D + +V ++L+DMY+R ++D A +F +E ++ V+WN +I G+
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 174 SEGEKALRTFSEML-----------REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
E AL +M R +P + ++ + A+ +L +GK +HA+ I
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K+ VG+ LVDMYAK G ++ + KVF+++ +++V++WN ++ HG G+ +
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLL 341
M+ G+ PN+VTF+ V ACSH+G++DEG F +MK +GVEP HY VDLL
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 342 GRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
GRAG + A + + MP + A W +LLGA R+H N+E+G AA+ + +L+P+ + +
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LLANIY+SAG + A R+ MKE GV+KEP CSW+E + VH FVA D +HPQ +
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 784
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK 520
+ E++++ GYVPD+S VL ++ E+E L HSEKLA+AF +++T PG+ I +
Sbjct: 785 GYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 844
Query: 521 KNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+RVC DCH A KF SK+V+REII+RD RFH F++G CSCGDYW
Sbjct: 845 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 184/358 (51%), Gaps = 6/358 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKND-IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L+ ++ + +HAH+ + D + + NT++N Y KCG K+FD + ++ V+W +
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCL 121
LIS ++ E A+ F ML ++P+ FTL SV+ A + G+QVHA+ L
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 229
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + N ++ ++L+ MY + ++ + L + ++ V+WN +++ + + +AL
Sbjct: 230 RKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
EM+ EG EP F+ SSV A + L GK +HA+ +K+G +FVG+ LVDMY
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTF 299
+ +VF+ + R + WN+M+ G +Q+ K + F M + G+ N T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
V+ AC +G + + K G++ + T +D+ R G +D A++ +M
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 6/270 (2%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+ +++ A++ + M+ LG+KP+ + ++LKA A D + G+Q+HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAV-ADLQDMELGKQIHAHV 123
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K+GY + V V ++L+++Y + + +F + +N+VSWN+LI+ + E A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTA---LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
L F ML E EP+ F+ SV TA L L GK VHA+ ++ G +L +F+ NTL
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MY K G + ++ + RD+V+WN++L+ Q+ + + +M+ G+ P++
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
T VL ACSH +L G+ A K+G
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNG 332
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 43/272 (15%)
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+S++ W L+ R + +A+ T+ +M+ G +P ++++ ++ A+A +E GK
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 216 WVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+HAHV K G G V NTLV++Y K G KVF+R+ +R+ VSWNS+++
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
+ + F ML + P+ T + V+TACS+ + EG + +G+ E +
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP-MPEGLMMGKQVHAYGLRKGELNS 236
Query: 335 V---TFVDLLGRAGLLD-------------------------------RALKFIREMP-- 358
T V + G+ G L AL+++REM
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 359 -IEPTAAVWGALLGACR----MHKNVELGAYA 385
+EP ++L AC + EL AYA
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/555 (40%), Positives = 348/555 (62%), Gaps = 4/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H ++ ++F ++ + N L+ Y+K C++E RKLF+EMP D V++ +I+ Y+ +
Sbjct: 263 IHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGK 322
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ +I LF ++ F ++L + A + D + GRQ+HA + D + V +
Sbjct: 323 VKESIDLFQELQFTTFDRKNFPFPTMLSIA-ASSLDLQMGRQLHAQVVVSMADPDFRVSN 381
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ + ++A +F L S++ V W A+I+ + ++ E L+ F EM R
Sbjct: 382 SLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSA 441
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+++ V A A+ S+ GK +H+ VI+SG V + G L+DMYA SI+DA K F
Sbjct: 442 DQATFACVLKASANLASILLGKQLHSCVIRSGFMNV-YSGCALLDMYANCASIKDAIKTF 500
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +R+VV+WN++L+ AQ+G GK T++ FE+M+ +G P+ V+FLC+LTACSH L++
Sbjct: 501 EEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVE 560
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG YF M + + P+ HY VD L R+G D A K + +MP EP VW ++L +
Sbjct: 561 EGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNS 620
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+HKN L AA ++F + D+ P++ ++NI+A AG+ + + +K M++ GV+K
Sbjct: 621 CRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKL 680
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
PA SWVE K+ VH+F ANDD HPQ+ I +K ++E++++ GY PD S D++ +
Sbjct: 681 PAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESK 740
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L+ HSE+LA+AFALI+TP GS I + KN+R C DCH+A K SK+V REI VRD+NR
Sbjct: 741 IDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNR 800
Query: 552 FHHFRDGFCSCGDYW 566
FHHFRDG CSCGDYW
Sbjct: 801 FHHFRDGSCSCGDYW 815
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 201/371 (54%), Gaps = 3/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ KE HA I+ + + NT+L++Y K G LD AR+LF EM D V++
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSF 209
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+ N E AI LF +M LG KP+ FT ++V+ AS G D FG+Q+H F +
Sbjct: 210 NVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISAS-VGLDDTAFGQQIHGFVV 268
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + NV+VG++ LD Y++ D +++ LF + + VS+N +I +A + ++++
Sbjct: 269 KTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESID 328
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F E+ F+ +F + ++ + AS+ L+ G+ +HA V+ S V N+LVDMYA
Sbjct: 329 LFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYA 388
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G E+A+++F RL R V W +M++ Q GL + ++ F +M R ++ +Q TF C
Sbjct: 389 KCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFAC 448
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL A ++ + G+ + + + G + +D+ + A+K EM E
Sbjct: 449 VLKASANLASILLGKQLHSCVIRSGFMNVYSG-CALLDMYANCASIKDAIKTFEEMS-ER 506
Query: 362 TAAVWGALLGA 372
W ALL A
Sbjct: 507 NVVTWNALLSA 517
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 13/355 (3%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+ I++ Y K G L AR++FD+ + +V WT +I YS++++ +A LF++M R G +
Sbjct: 78 DIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQ 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGR---QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
P+ T ++L G D + + Q HA +K G+ N V ++LLD Y + +D
Sbjct: 138 PDYVTYITLL----TGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDS 193
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + + VS+N +I G+A E+A+ F EM GF+P+ F++++V +A
Sbjct: 194 ARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVG 253
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+ +H V+K+ FVGN +D Y+K + + K+FN + + D VS+N +
Sbjct: 254 LDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVI 313
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+T A G K ++ F+++ F +L+ + + L G+ A +
Sbjct: 314 ITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMA 373
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+P+ + VD+ + G + A + + T W A++ A NV+ G
Sbjct: 374 DPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP-WTAMISA-----NVQRG 422
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+ +++ GF+P ++ + L+ G L Q + ++ +F + ++ Y KS
Sbjct: 32 ARIVKTGFDPITSRFNFMIKDLSERGQLCQAR----QLLDQMPNRNSFSIDIIISGYVKS 87
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G++ A ++F+ +R VV+W +M+ ++ + F +M R+G P+ VT++ +L
Sbjct: 88 GNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLL 147
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T C+ + E A + K G T +D + G LD A + EM
Sbjct: 148 TGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEM 201
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 357/586 (60%), Gaps = 28/586 (4%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+HL+ L+ + +HA+ L GS +N + + +++ Y C + R++FD M + +
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 60 TWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKA---SGAGATDDKFGRQ 115
W A+I+GYSQN+ + A++LF M GL N T++ V+ A SGA F R+
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA------FSRK 424
Query: 116 --VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+H F +K G D + +V ++L+DMY+R ++D A +F +E ++ V+WN +I G+
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 174 SEGEKALRTFSEML-----------REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
E AL +M R +P + ++ + A+ +L +GK +HA+ I
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K+ VG+ LVDMYAK G ++ + KVF+++ +++V++WN ++ HG G+ +
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLL 341
M+ G+ PN+VTF+ V ACSH+G++DEG F +MK +GVEP HY VDLL
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 342 GRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
GRAG + A + + MP + A W +LLGA R+H N+E+G AA+ + +L+P+ + +
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LLANIY+SAG + A R+ MKE GV+KEP CSW+E + VH FVA D +HPQ +
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 784
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK 520
+ E++++ GYVPD+S VL ++ E+E L HSEKLA+AF +++T PG+ I +
Sbjct: 785 GYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 844
Query: 521 KNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+RVC DCH A KF SK+V+REII+RD RFH F++G CSCGDYW
Sbjct: 845 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 184/358 (51%), Gaps = 6/358 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKND-IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L+ ++ + +HAH+ + D + + NT++N Y KCG K+FD + ++ V+W +
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCL 121
LIS ++ E A+ F ML ++P+ FTL SV+ A + G+QVHA+ L
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 229
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + N ++ ++L+ MY + ++ + L + ++ V+WN +++ + + +AL
Sbjct: 230 RKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
EM+ EG EP F+ SSV A + L GK +HA+ +K+G +FVG+ LVDMY
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTF 299
+ +VF+ + R + WN+M+ G +Q+ K + F M + G+ N T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
V+ AC +G + + K G++ + T +D+ R G +D A++ +M
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 6/270 (2%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+ +++ A++ + M+ LG+KP+ + ++LKA A D + G+Q+HA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAV-ADLQDMELGKQIHAHV 123
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K+GY + V V ++L+++Y + + +F + +N+VSWN+LI+ + E A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTA---LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
L F ML E EP+ F+ SV TA L L GK VHA+ ++ G +L +F+ NTL
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MY K G + ++ + RD+V+WN++L+ Q+ + + +M+ G+ P++
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
T VL ACSH +L G+ A K+G
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNG 332
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 43/272 (15%)
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+S++ W L+ R + +A+ T+ +M+ G +P ++++ ++ A+A +E GK
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 216 WVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+HAHV K G G V NTLV++Y K G KVF+R+ +R+ VSWNS+++
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
+ + F ML + P+ T + V+TACS+ + EG + +G+ E +
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP-MPEGLMMGKQVHAYGLRKGELNS 236
Query: 335 V---TFVDLLGRAGLLD-------------------------------RALKFIREMP-- 358
T V + G+ G L AL+++REM
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 359 -IEPTAAVWGALLGACR----MHKNVELGAYA 385
+EP ++L AC + EL AYA
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/565 (39%), Positives = 347/565 (61%), Gaps = 4/565 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
HL +L R VHA+ + +D+ + NT+++ Y KC ++ + ++FD M +KD V+WT
Sbjct: 377 HLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTT 436
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I+ Y+Q+ + AI F + G+K + + S+L+A +G +QVH++ ++
Sbjct: 437 IIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEAC-SGLKSISLLKQVHSYAIRN 495
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G ++ + + ++D+Y ++ A +F L+ K+ V+W +++ A +A+ F
Sbjct: 496 GL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALF 554
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+ML G +P + + A+A SL +GK +H +I+ + V ++LVDMY+
Sbjct: 555 GKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGC 614
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GS+ A KVF+ +DVV W +M+ HG GK + F++ML G++P+ V+FL +L
Sbjct: 615 GSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674
Query: 304 TACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH+ L+DEG+ Y +M K+ ++P + HY VDLLGR+G + A KFI+ MP+EP
Sbjct: 675 YACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPK 734
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+ VW ALLGACR+HKN EL A +++ EL+P + G ++L++N++A G+ N+ R
Sbjct: 735 SVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTK 794
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG-YVPDSSH 481
M E G++K+PACSW+E N VH F A D +H IH K EI+EK+++ G YV D+S
Sbjct: 795 MTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSF 854
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL ++E+ L HSE+LA++F LIST G+ + I KN+RVCGDCH K SK+ E
Sbjct: 855 VLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFE 914
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFHHF G CSCGD+W
Sbjct: 915 REIVVRDANRFHHFSGGTCSCGDFW 939
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 173/343 (50%), Gaps = 10/343 (2%)
Query: 6 KKLKEARIVHAHILGS-AFKNDIA--MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ + E R +HAH + + A +D A + +L Y KCG L +A +LFD MP + + +W
Sbjct: 69 RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWN 128
Query: 63 ALISGYSQNDQPENAIILFSQMLR----LGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
ALI + A+ ++ M G P+ TL+SVLKA GA D + G +VH
Sbjct: 129 ALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEG-DGRCGSEVHG 187
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAGHARKSEGE 177
+K G D + V ++L+ MYA+ +D A +F + +V SWN+ I+G +
Sbjct: 188 LAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFL 247
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M +GF ++ V A L G+ +HA ++K G + N L+
Sbjct: 248 EALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF-NIQCNALL 306
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MYA+ G ++ A +VF + +D +SWNSML+ Q+ L + +F +M++NG P+
Sbjct: 307 VMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHA 366
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ +L+A H G L G+ A K ++ + T +D+
Sbjct: 367 CIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDM 409
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 227/503 (45%), Gaps = 59/503 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALISGYSQND 72
VH + S + N ++ YAKCG LD A ++F+ M +D+ +W + ISG QN
Sbjct: 185 VHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNG 244
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
A+ LF +M G N +T VL+ A + GR++HA LK G ++N+
Sbjct: 245 MFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNH-GRELHAALLKCGTEFNIQC- 302
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++LL MYAR +D A +F + K+ +SWN++++ + + +A+ F EM++ GF
Sbjct: 303 NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P H S+ +A+ G L G+ VHA+ +K + NTL+DMY K S+E + +V
Sbjct: 363 PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARV 422
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS----- 307
F+R+ +D VSW +++ AQ + F + GI + + +L ACS
Sbjct: 423 FDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSI 482
Query: 308 -----------HAGLLDE-------------GQGYFALMKKHGVEPEE-AHYVTFVDLLG 342
GLLD G+ +AL ++ ++ + + V+
Sbjct: 483 SLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFA 542
Query: 343 RAGLLDRALKFIREM---PIEPTA----AVWGALLGACRMHKNVELGAYAAERIFELDPH 395
GLL A+ +M I+P + + GA+ G + K E+ + F P
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKF---PV 599
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ L ++Y+ G +N A K+ E+ K + W NA M H +
Sbjct: 600 EGAVVSSLVDMYSGCGSMN---YALKVFDEA--KCKDVVLWTAMINATGMH-----GHGK 649
Query: 456 RAMIHKKWREISEKIKQIGYVPD 478
+A+ I +++ + G PD
Sbjct: 650 QAIY------IFKRMLETGVSPD 666
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 146/319 (45%), Gaps = 14/319 (4%)
Query: 113 GRQVHAFCLKYGY---DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG 169
GRQ+HA + G D ++ + LL MY + ++ DA LF + ++ SWNALI
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133
Query: 170 HARKSEGEKALRTFSEMLRE----GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+A+ + M G P + +SV A + G G VH +KSG
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWF 284
V N LV MYAK G ++ A +VF + RDV SWNS ++GC Q+G+ + F
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
+M +G + N T + VL C+ L+ G+ A + K G E V + R
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARC 312
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILL 403
G +D AL+ RE+ + W ++L +C + L A A + E+ + P H +
Sbjct: 313 GWVDSALRVFREIG-DKDYISWNSML-SCYVQN--RLYAEAIDFFGEMVQNGFNPDHACI 368
Query: 404 ANIYASAGRLNDAARARKM 422
++ ++ G L R++
Sbjct: 369 VSLLSAVGHLGRLINGREV 387
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 8/204 (3%)
Query: 178 KALRTFSEMLREGFEPTHFS-YSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVG 233
+ALR + G P Y V +A ++ +G+ +HAH + +G F+
Sbjct: 37 EALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLA 96
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--- 290
L+ MY K G + DA ++F+ + R V SWN+++ C G V + M +
Sbjct: 97 TKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPV 156
Query: 291 -GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G AP+ T VL AC G G L K G++ V + + GLLD
Sbjct: 157 AGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDS 216
Query: 350 ALKFIREMPIEPTAAVWGALLGAC 373
AL+ M A W + + C
Sbjct: 217 ALRVFEWMRDGRDVASWNSAISGC 240
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/582 (38%), Positives = 351/582 (60%), Gaps = 25/582 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + H +++DI + + ++ Y+ CG L++ARK+FDE+P +++V+W
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 62 TALISGYSQNDQPENAIILFSQML-------------RLGLKPNQFTLSSVLKASGAGAT 108
T++I GY N +A+ LF +L +GL +S+ + G T
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS---VISACSRVPAKGLT 202
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ--MDDAWFLFTALESKNEVSWNAL 166
+ +H+F +K G+D V VG++LLD YA+ + + A +F + K+ VS+N++
Sbjct: 203 E-----SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 167 IAGHARKSEGEKALRTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
++ +A+ +A F +++ + + S+V A++ +G+L GK +H VI+ G
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ VG +++DMY K G +E A K F+R+ ++V SW +M+ G HG + F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRA 344
M+ +G+ PN +TF+ VL ACSHAGL EG +F MK + GVEP HY VDLLGRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
G L +A I+ M ++P + +W +LL ACR+HKNVEL + R+FELD + G ++LL+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
+IYA AGR D R R +MK G+ K P S +E VH+F+ D+ HPQR I++
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
E++ K+ + GYV ++S V D++E+E L+VHSEKLA+AF +++T PGST+++ KN+R
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
VC DCH+ K SK+V+RE +VRD RFHHF+DG CSCGDYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 136/326 (41%), Gaps = 49/326 (15%)
Query: 151 LFTALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF K +V SWN++IA AR + +AL FS M + PT S+ A +S
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ GK H G Q FV + L+ MY+ G +EDA KVF+ + KR++VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFL------CVLTACSHA-------------- 309
G +G V F+ +L + + FL V++ACS
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 310 ------------GLLDE----GQGYFALMKK---HGVEPEEAHYVTFVDLLGRAGLLDRA 350
LLD G+G A+ +K V+ + Y + + + ++G+ + A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 351 LKFIREM----PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS---GPHILL 403
+ R + + A +L A + +G +++ + D G I+
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII- 329
Query: 404 ANIYASAGRLNDAARARKMMKESGVK 429
++Y GR+ A +A MK V+
Sbjct: 330 -DMYCKCGRVETARKAFDRMKNKNVR 354
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 351/600 (58%), Gaps = 36/600 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
C L ++ R +H IL S D+ + N +L+ YAKCG
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195
Query: 42 ------CLDE-----ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
CL + A +LFDE ++D+ +W ++SG ++ A+ QM+R G+
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ +T S V +G ++ D GRQ+H + + + +VG SL+DMY + +M+ A
Sbjct: 256 FSNYTYSMVFALAGLLSSRD-LGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALS 314
Query: 151 LF---TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + + +W+ ++AG+ + E+AL F MLREG F +SV +A A+
Sbjct: 315 IFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACAN 374
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G +EQG+ VH V K G + A + + +VDMY+KSGS+EDA ++F ++V W +M
Sbjct: 375 AGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTM 434
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
L A HG G+ + F +M I PN++T + VL+ACSH+GL+ +G YF LM++ +G
Sbjct: 435 LCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYG 494
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+ P HY VDL GRAGLLD+A FI E I A VW LL ACR+HK++E A+
Sbjct: 495 IVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLAS 554
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
E++ +L+ +D+G ++L++N+YA+ + D + R MKE V+K+P SW+ KN VH F
Sbjct: 555 EKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRF 614
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
VA D +HP+ A I+ ++ E++K++GY + V+ ++++RE L+ HSEKLA+AF
Sbjct: 615 VALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAF 674
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ISTP G+ + I KN+RVC DCH A KF ++ +REI+VRD RFHHF+DG CSC D+W
Sbjct: 675 GIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 176/364 (48%), Gaps = 38/364 (10%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL--GLKPNQFTLSSVL 100
L A ++FD P + + WT++ISG ++ + + + F++ML PN F L+ VL
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
+ AG D + GR++H + L+ G +V + +++LDMYA+ A F A+ K+
Sbjct: 134 RCC-AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDA 192
Query: 161 V-------------------------------SWNALIAGHARKSEGEKALRTFSEMLRE 189
SWN +++G R +AL +M+R
Sbjct: 193 TSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRA 252
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G ++++YS VF S + G+ +H V+ + + AFVG +L+DMY K G +E A
Sbjct: 253 GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESA 312
Query: 250 EKVFNR---LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+F+R + +W++M+ G Q+G + + +F +MLR G+ Q V +AC
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASAC 372
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
++AG++++G+ ++K G + VD+ ++G L+ A + R + A+W
Sbjct: 373 ANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTK-NVALW 431
Query: 367 GALL 370
+L
Sbjct: 432 TTML 435
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/573 (41%), Positives = 345/573 (60%), Gaps = 22/573 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG---CLDEARKLFDEMPVKDM 58
CT L ++ +H+ L +D + +++ YAK +D A K+F+ MP D+
Sbjct: 264 CTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDV 323
Query: 59 VTWTALISGYSQNDQPENAII-LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTALISGY Q+ EN ++ LF +ML +KPN T SS+LK S A +D GRQVH
Sbjct: 324 ISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILK-SCASISDHDSGRQVH 382
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A +K VG++L+ MYA M++A +F L ++ + +EG
Sbjct: 383 AHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPC---------ITEG- 432
Query: 178 KALRTFS---EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
R F ++R + +++S+ +A AS G L +G+ +HA +K+G FV N
Sbjct: 433 ---RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSN 489
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+LV MY++ G +EDA + FN L R+V+SW SM++G A+HG + + F M+ G+ P
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
N VT++ VL+ACSH GL+ EG+ YF M++ HG+ P HY VDLL R+G++ AL+F
Sbjct: 550 NDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEF 609
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I EMP++ A VW LLGACR H N+E+G A+ + EL+P D P++LL+N+YA AG
Sbjct: 610 INEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLW 669
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
++ AR R M+++ + KE SW+E +N H F A D +HP+ I+ K + +IK +
Sbjct: 670 DEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGM 729
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GYVPD+S VL + +E L HSEK+A+AF LI+T I I KN+RVC DCHSA
Sbjct: 730 GYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAI 789
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ SK REII+RD+NRFH +DG CSCG+YW
Sbjct: 790 KYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 189/364 (51%), Gaps = 24/364 (6%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
D+A+ + +++ A+ G L ARK+FD + K +V WT LIS Y Q + E A+ LF
Sbjct: 186 TDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDF 245
Query: 85 LRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
L G +P+++T+SS++ A + G+ + G Q+H+ L+ G + V L+DMYA+ +
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSV--RLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303
Query: 144 ---QMDDAWFLFTALESKNEVSWNALIAGHARKSEGE-KALRTFSEMLREGFEPTHFSYS 199
MD A +F + + +SW ALI+G+ + E K + F EML E +P H +YS
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ + AS + G+ VHAHVIKS VGN LV MYA+SG +E+A +VFN+L +R
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWF---EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
++ C G R F +++R + + TF +++A + G+L +GQ
Sbjct: 424 SMIP-------CITEG------RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQ 470
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
A+ K G + + V + R G L+ A + E+ + W +++ H
Sbjct: 471 QLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISGLAKH 529
Query: 377 KNVE 380
E
Sbjct: 530 GYAE 533
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 220/458 (48%), Gaps = 42/458 (9%)
Query: 8 LKEARIVHAHIL-GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALI 65
L+ R +H +L G D + N++L Y++CG + AR +FD M ++D+V+WTA+
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG- 124
S ++N +++L +ML GL PN +TL + A G V K G
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +V VGS+L+DM AR + A +F L K V W LI+ + + E+A+ F
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+ L +GFEP ++ SS+ +A GS+ G +H+ ++ G A V LVDMYAKS
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303
Query: 245 ---SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR-WFEKMLRNGIAPNQVTFL 300
+++ A KVF R+ K DV+SW ++++G Q G+ + V F +ML I PN +T+
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFI---- 354
+L +C+ D G+ A + K AH V V + +G ++ A +
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKS--NQASAHTVGNALVSMYAESGCMEEARRVFNQLY 421
Query: 355 -----------REMPIE---------PTAAVWGALLGAC----RMHKNVELGAYAAERIF 390
R+ P++ +++ + +L+ A + K +L A + + F
Sbjct: 422 ERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGF 481
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
D S L ++Y+ G L DA R+ +K+ V
Sbjct: 482 GSDRFVSNS---LVSMYSRCGYLEDACRSFNELKDRNV 516
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/535 (41%), Positives = 332/535 (62%), Gaps = 44/535 (8%)
Query: 37 YAKC---GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ-PENAIILFSQMLRLGLKPN 92
YAKC G +D++RK+F++MP ++++WTA+I+ Y Q+ + + AI LF +M+ +
Sbjct: 2 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC- 60
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
VG+SL+ MYAR +M+DA F
Sbjct: 61 --------------------------------------VGNSLISMYARSGRMEDARKAF 82
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
L KN VS+NA++ G+A+ + E+A F+E+ G + F+++S+ + AS G++
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+G+ +H ++K G + + N L+ MY++ G+IE A +VFN + R+V+SW SM+TG A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEE 331
+HG + F KML G PN++T++ VL+ACSH G++ EGQ +F ++ K+HG+ P
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGR+GLL A++FI MP+ A VW LLGACR+H N ELG +AAE I E
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
+P D +ILL+N++ASAG+ D + RK MKE + KE CSW+E +N VH F +
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
+HPQ I+++ +++ KIK++GY+PD+ VL +++++E L HSEK+A+AF LIST
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+RVCGDCH+A K+ S REI+VRD+NRFHH ++G CSC DYW
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 142/248 (57%), Gaps = 5/248 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N++++ YA+ G +++ARK FD + K++V++ A++ GY++N + E A +LF+++ G+
Sbjct: 63 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 122
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FT +S+L + + K G Q+H LK GY N + ++L+ MY+R ++ A+
Sbjct: 123 ISAFTFASLLSGAASIGAMGK-GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 181
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F +E +N +SW ++I G A+ +AL F +ML G +P +Y +V +A + G
Sbjct: 182 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 241
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+ +G+ + K G +V + + +VD+ +SG + +A + N + L D + W ++
Sbjct: 242 ISEGQKHFNSMYKEHG-IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 300
Query: 268 LTGCAQHG 275
L C HG
Sbjct: 301 LGACRVHG 308
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 60/89 (67%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H +L +K++ + N +++ Y++CG ++ A ++F+EM +++++WT++I+G++++
Sbjct: 147 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 206
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKA 102
A+ +F +ML G KPN+ T +VL A
Sbjct: 207 ATRALEMFHKMLETGTKPNEITYVAVLSA 235
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 339/541 (62%), Gaps = 14/541 (2%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++ Y+KCG ++ AR LF + D++ + A+ISG++ N E ++ LF ++L G + +
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVS 309
Query: 93 QFTLSSVLKASGAGATDDKFGR-----QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
T+ ++ FG +H FC+K G N V ++ +Y + +++D
Sbjct: 310 SSTIVGLIP------LHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDL 363
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF K V+WNA+I+G+ + E A+ F EM++ F P + +++ +A A
Sbjct: 364 ARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQ 423
Query: 208 TGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
GSL GKWVH H+IKS + +V LVDMYAK G+I +A ++F+ + +++ V+WN+
Sbjct: 424 LGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNT 482
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKH 325
M+ G HG G ++ + +ML G P+ VTFL VL ACSHAGL+ EG+ F ++ K+
Sbjct: 483 MIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKY 542
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+EP HY VD+LGR+G L++AL+FI++MP+EP AVWG LLGAC +HK+ ++ A
Sbjct: 543 RIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLA 602
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
+ER+FELDP G ++LL+NIY+ AA R+++K+ + K P C+ +E H+
Sbjct: 603 SERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHV 662
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
FV+ D +H I+ K +++ K++++GY ++ L +++E+E + VHSEKLA+A
Sbjct: 663 FVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIA 722
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F LI+T PG+ I I KN+RVC DCH+A KF SK+ ER I+VRD NRFHHF+DG CSCGDY
Sbjct: 723 FGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDY 782
Query: 566 W 566
W
Sbjct: 783 W 783
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 183/368 (49%), Gaps = 2/368 (0%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K ++HAH + + +++ + + +++ Y K + ARK+FD MP +D V W +I+G
Sbjct: 125 KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGL 184
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
+N +++I LF +M+ G++ + T+++VL A+ A + K G + LK G+ +
Sbjct: 185 VKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAA-AELQELKVGMGIQCLALKIGFGFC 243
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
YV + L+ +Y++ ++ A LF + + +++NA+I+G E +++ F E+L
Sbjct: 244 DYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLF 303
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G + + + + G L +H +KSG L V +Y K I+
Sbjct: 304 SGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDL 363
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A +F+ ++ VV+WN+M++G Q+G + + F++M++ PN VT +L+AC+
Sbjct: 364 ARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQ 423
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G L G+ L+K +EP VD+ + G + A + M E W
Sbjct: 424 LGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNT 482
Query: 369 LLGACRMH 376
++ +H
Sbjct: 483 MIFGYGLH 490
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 172/367 (46%), Gaps = 6/367 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA + + ++ D+A + AR LF +P D+ + L+ G+S ND P
Sbjct: 32 HAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSP 91
Query: 75 ENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++I L++ + R L P+ FT + + A ++DK +HA + GY NV+VGS
Sbjct: 92 SSSISLYTHLRRNTNLSPDNFTYAFAV----AACSNDKHLMLLHAHSIIDGYGSNVFVGS 147
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+D+Y +F ++ A +F + ++ V WN +I G + + +++ F EM+ +G
Sbjct: 148 ALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRV 207
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ ++V A A L+ G + +K G +V L+ +Y+K G + A +F
Sbjct: 208 DSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLF 267
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
R+ + D++++N+M++G +G + +V+ F ++L +G + T + ++ S G L
Sbjct: 268 RRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLH 327
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
K G+ F + + +D A E P E T W A++
Sbjct: 328 LACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP-EKTVVAWNAMISGY 386
Query: 374 RMHKNVE 380
+ + E
Sbjct: 387 TQNGSTE 393
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 151/371 (40%), Gaps = 21/371 (5%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q HA + GY +++ + L F A LF ++ + +N L+ G +
Sbjct: 30 QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89
Query: 175 EGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
++ ++ + R P +F+Y+ A+A+ + + +HAH I G FVG
Sbjct: 90 SPSSSISLYTHLRRNTNLSPDNFTYA---FAVAACSNDKHLMLLHAHSIIDGYGSNVFVG 146
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ LVD+Y K + A KVF+ + +RD V WN+M+ G ++ +++ F +M+ +G+
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+ T VL A + L G G L K G + + L + G ++ A
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGA-YAAERIFELDPHDSGPHILLANIYASAGR 412
R + P + A++ + E E +F + S + L +++ G
Sbjct: 267 FRRIN-RPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGH 325
Query: 413 LNDAARARKMMKESGVKKEPACSWV---------ETKNAVHMFVANDDAHPQRAMIHKKW 463
L+ A +SG+ P S E A H+F D P++ ++ W
Sbjct: 326 LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLF----DESPEKTVV--AW 379
Query: 464 REISEKIKQIG 474
+ Q G
Sbjct: 380 NAMISGYTQNG 390
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH I + +I + +++ YAKCG + EA +LFD M K+ VTW
Sbjct: 421 CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW 480
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV-HAF 119
+I GY + A+ L+++ML LG P+ T SVL A S AG + G ++ H
Sbjct: 481 NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGE--GEEIFHNM 538
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
KY + + + ++D+ R Q++ A
Sbjct: 539 VNKYRIEPLIEHYACMVDILGRSGQLEKA 567
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/537 (41%), Positives = 329/537 (61%), Gaps = 10/537 (1%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++ YA+ G L +AR+LFDE P +D+ TWTA++SGY QN + A F +M +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----E 294
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+ + ++++ D + + WN +++ Y + + A
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN-----TMITGYGQIGDIAQARK 349
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F + ++ VSW A+IAG+A+ E+AL F E+ ++G ++ + A +
Sbjct: 350 FFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAA 409
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
LE GK +H +K G FVGN L+ MY K GSI++A F + ++DVVSWN+ML G
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAG 469
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
A+HG G+ + FE M G+ P+++T + VL+ACSH GLLD G YF ++ K +GV P
Sbjct: 470 YARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIP 529
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY +DLLGRAG L+ A IR MP +P AA WGALLGA R+H N ELG AAE +
Sbjct: 530 TSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMV 589
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
F+++P +SG ++LL+N+YA++GR DA + R M++ GV+K P SWVE +N +H F
Sbjct: 590 FKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVG 649
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HP++ I+ E+ K+++ GYV + VL +++E+E L+ HSEKLA+AF ++
Sbjct: 650 DCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 709
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ P G I + KN+RVC DCHSA K SK+V R II+RD++RFHHF +GFCSCGDYW
Sbjct: 710 TIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 125/270 (46%), Gaps = 61/270 (22%)
Query: 299 FLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
FL V+ + GLLD G YF M +++ V P HY +DLLGR L+
Sbjct: 770 FLLVVI---YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE-------- 818
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
GALLGA R+H N ELG AA+ F++ P +SG
Sbjct: 819 ---------GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI------------------ 851
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
M++ GV+K P SW E +N +H F +S + + IG++
Sbjct: 852 ---SKMRDVGVQKVPGYSWFEVQNKIHTFSVG--------------LFLSRERENIGFLE 894
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHI-KKNIRVCGDCHSAFKFA 536
+ + ++E+E L+ SE LA A +++ P G + KK + VC DC SA K
Sbjct: 895 ELDLKMR-EREEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHM 953
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+V R I +RD+ H F + CSCG+YW
Sbjct: 954 SKIVGRLITLRDS---HRFNESICSCGEYW 980
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 68/406 (16%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DI N ++ + + G D A +F+ MP + V++ A+ISGY +N + A LF QM
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
L + WNV +L Y R ++
Sbjct: 108 ERDL-----------------------------------FSWNV-----MLTGYVRNCRL 127
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
DA LF + K+ VSWN+L++G+A+ ++A F M E S++ + A
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAY 183
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G +E+ + KS L+++ N L+ + + + DA +F+++ RD +SWN
Sbjct: 184 VHNGRIEEACLLFES--KSDWDLISW--NCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ--VTFLCVLTACSHAGLLDEGQGYFALMK 323
+M++G AQ G R F++ +P + T+ +++ G+LDE + +F M
Sbjct: 240 TMISGYAQGGGLSQARRLFDE------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
E E Y + + +D A + MP ++ W ++ ++G
Sbjct: 294 ----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS-WNTMITGYG-----QIGD 343
Query: 384 YA-AERIFELDPH-DSGPHILLANIYASAGRLNDAARARKMMKESG 427
A A + F++ P D + YA +G +A +K+ G
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + +H + + + N +L Y KCG +DEA F+ + KD+V+W
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++GY+++ A+ +F M G+KP++ T+ VL A D+ ++
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG + ++D+ R ++++A L + SW AL+ H GE
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE 583
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
KA +M EP + S L S G+WV A ++S
Sbjct: 584 KAAEMVFKM-----EPQN----SGMYVLLSNLYAASGRWVDADKMRS 621
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 345/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ V + +K+D+ + +++L+ YA+ G + +A K+FD MP +D VTW
Sbjct: 118 CARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTW 177
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +++G+ QP +AI ++ +M G+K ++ + V++A A A + + G VH L
Sbjct: 178 STMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTA-ARNVRMGASVHGHLL 236
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G +V +SL+DMYA+ +D A +F + +N+VSW+A+I+G A+ + ++ALR
Sbjct: 237 RHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALR 296
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P + S A ++ G L+ G+ VH +++ +G +DMY+
Sbjct: 297 LFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRF-DFNCILGTAAIDMYS 355
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A+ +FN + RD++ WN+M+ C HG G+ + F++M G+ P+ TF
Sbjct: 356 KCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFAS 415
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL++EG+ +F M H + P E HYV VDLL R+GL++ A + M E
Sbjct: 416 LLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAE 475
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT A+W ALL C +K +ELG A+ I EL P D G L++N+YA+ + + + R
Sbjct: 476 PTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVR 535
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SG KK P CS +E + H F+ D +HPQR I K ++ +++++GY+P +
Sbjct: 536 KLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTE 595
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V +++ +E +L HSEKLA+AF L++T PG+ + I KN+RVCGDCH A K+ SK+
Sbjct: 596 FVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIA 655
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD RFHHF+DG CSC DYW
Sbjct: 656 DREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
H+R+ ALR F L P +++ +A A G L G+ V +G +
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV ++L+ +YA+ G++ DA KVF+R+ +RD V+W++M+ G G ++ + +M
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ ++V + V+ AC+ A + G + +HG+ + + VD+ + GLLD
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 350 ALKFIREMPIEPTAAVWGALL 370
A + M + W A++
Sbjct: 263 ACRVFGLM-VHRNDVSWSAMI 282
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 352/598 (58%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + +HA ++ S + D + + ++ YAKCG EA+++F+ + ++ V+W
Sbjct: 280 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI G Q + ++ LF+QM + +QF L++++ D GRQ+H+ CL
Sbjct: 340 TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-FNRMDLCLGRQLHSLCL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-------------------------- 155
K G++ + V +SL+ +YA+ + +A F+F+++
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458
Query: 156 -----ESKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTG 209
+++N ++WNA++ + + E L+ +S ML ++ P +Y ++F A G
Sbjct: 459 FFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + H +K+G L V N + MY+K G I +A+K+F+ L +DVVSWN+M+T
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ ML G P+ ++++ VL+ CSH+GL+ EG+ YF +M + HG+
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I +MP++PTA VWGALL AC++H N EL AA+
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 698
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELD DSG ++LLA IY+ AG+ +D+A+ RK+M++ G+KK P SW+E +N VH+F A
Sbjct: 699 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 758
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+D +HPQ I K E+ EKI +GYV + E HSEKLA+AF +
Sbjct: 759 DDVSHPQVIAIRNKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGI 807
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+S P IHI KN+R+CGDCH+ K S V +RE ++RD RFHHF+ G CSCGDYW
Sbjct: 808 MSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 34/386 (8%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N ++N YAK G L +A +LFD MP +D+ +W L+SGY Q + + + F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 86 RLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
R G PN FT V+K+ GA + Q+ K+ + + V ++L+DM+ R
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRE-LAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 188
Query: 145 MDDAWFLFTALE-------------------------------SKNEVSWNALIAGHARK 173
+D A LF+ +E ++ VSWN +IA ++
Sbjct: 189 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 248
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL EM R+G +Y+S TA A SL GK +HA VI+S Q+ +V
Sbjct: 249 GRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ L+++YAK GS ++A++VFN L R+ VSW ++ G Q+ +V F +M +A
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+Q +++ C + L G+ +L K G + + L + G L A +F
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EF 427
Query: 354 IREMPIEPTAAVWGALLGACRMHKNV 379
+ E W +++ A N+
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNI 453
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 168/312 (53%), Gaps = 6/312 (1%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
I +N++L YAK +D A + F++M +D+V+W +I+ SQ+ + A+ L +M R
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 263
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++ + T +S L A A +G+Q+HA ++ + YV S+L+++YA+
Sbjct: 264 KGVRLDSTTYTSSLTAC-ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 322
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A +F +L+ +N VSW LI G + K++ F++M E F+ +++ +
Sbjct: 323 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 382
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ L G+ +H+ +KSG V N+L+ +YAK G +++AE VF+ + +RD+VSW S
Sbjct: 383 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 442
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKH 325
M+T +Q G +F+ M N +T+ +L A G ++G + Y A++ +
Sbjct: 443 MITAYSQIGNIIKAREFFDGM----DTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK 498
Query: 326 GVEPEEAHYVTF 337
V P+ YVT
Sbjct: 499 DVTPDWVTYVTL 510
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
G +AL ++ G F +++ A S G+L + + IK + N
Sbjct: 22 GARALH--GRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITH---NI 76
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA-P 294
+++ YAK GS+ DAE++F+R+ +RDV SWN++++G Q + F M R+G + P
Sbjct: 77 MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N TF CV+ +C G + L K + VD+ R G +D A +
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
++ PT ++L ++ +A E ++ D ++ + +GR+
Sbjct: 197 SQIE-RPTIFCRNSMLAGYAKLYGID---HAIEYFEDMAERDVVSWNMMIAALSQSGRVR 252
Query: 415 DAARARKMMKESGVK 429
+A M GV+
Sbjct: 253 EALGLVVEMHRKGVR 267
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/537 (40%), Positives = 332/537 (61%), Gaps = 11/537 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N ++ YA+ G L EAR+LF+E+P++D+ WTA++SG+ QN + A +F +M +
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----E 305
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+ + ++++ +K + WN V YA+ +D A
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNIDQAKI 360
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + ++ +SW A+I+G+A+ + E+AL F +M R+G + + ++ A +
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
LE GK +H ++K+G Q GN L+ MY K GSIE+A VF + ++D+VSWN+M+ G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
A+HG GK + FE M + I P+ VT + VL+ACSH GL+D+G YF ++ + +G+
Sbjct: 481 YARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITA 539
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY +DLLGRAG LD AL ++ MP P AA WGALLGA R+H + ELG AAE++
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV 599
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
FE++P +SG ++LL+N+YA++GR + R M++ GVKK P SWVE +N H+F
Sbjct: 600 FEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVG 659
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HP+ I+ E+ ++K+ G+V + VL +++E+E L+ HSEKLA+AF ++
Sbjct: 660 DCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 719
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S PPG I + KN+RVC DCH+A K SK+ +R+IIVRD+NRFHHF +G CSCGDYW
Sbjct: 720 SIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 64/405 (15%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+DI N ++AY + G + A +F+ M + VT+ A+ISGY N++ + A +F +M
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
P++ +S WNV +L Y +
Sbjct: 118 ------PDRDLIS-----------------------------WNV-----MLSGYVKNGN 137
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A LF + K+ VSWNA+++G A+ E+A + F +ML + S++ + +A
Sbjct: 138 LSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSA 193
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
G +E + + K ++V++ N L+ Y + ++DA +F+R+ RD +SW
Sbjct: 194 YVQNGRIEDARRLFDS--KMDWEIVSW--NCLMGGYVRKKRLDDARSLFDRMPVRDKISW 249
Query: 265 NSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
N M+TG AQ+GL R FE++ +R+ A + +++ G+LDE F M
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFA-----WTAMVSGFVQNGMLDEATRIFEEMP 304
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
E E + + ++ +++A + +MP T++ W ++ N++
Sbjct: 305 ----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS-WNTMVTGYAQCGNID--- 356
Query: 384 YAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
A+ +F E+ D + + YA +G+ +A MK G
Sbjct: 357 -QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + +H ++ + F+ N +L Y KCG ++EA +F+++ KD+V+W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ + A+ LF M ++ +KP+ TL VL A DK ++
Sbjct: 475 NTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQ 533
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG N + ++D+ R ++D+A L ++ + +W AL+ H GE
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
KA EM EP + S L S G+W ++S
Sbjct: 594 KAAEKVFEM-----EPDN----SGMYVLLSNLYAASGRWREVREMRS 631
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/578 (38%), Positives = 338/578 (58%), Gaps = 51/578 (8%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE------------------ARKL 49
L+E R I + + N ++N YAK G E ARKL
Sbjct: 152 LREGR----RIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKL 207
Query: 50 FDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD 109
FDE+ +D+++W ++ISGY N E + LF QML LG+ + T+ SV
Sbjct: 208 FDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV---------- 257
Query: 110 DKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG 169
+ + + LLDMY++ ++ A +F + ++ VSW ++IAG
Sbjct: 258 ------------------ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG 299
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+AR+ + ++R F EM +E P + + + A AS +LE+G+ +H H++++G L
Sbjct: 300 YAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 359
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
V N LVDMY K G++ A +F+ + ++D+VSW M+ G HG G + F +M
Sbjct: 360 RHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRN 419
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLD 348
+GI P++V+F+ +L ACSH+GLLDEG G+F +M+ + +EP+ HY VDLL RAG L
Sbjct: 420 SGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLS 479
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYA 408
+A KFI+ MPIEP A +WGALL CR++ +V+L AE +FEL+P ++G ++LLANIYA
Sbjct: 480 KAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYA 539
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISE 468
A + + + R+ + G++K P CSW+E K VH+FV D +HP I ++
Sbjct: 540 EAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRT 599
Query: 469 KIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGD 528
++K+ G+ P + L AD E+E L HSEK+A+AF ++S PPG T+ + KN+RVCGD
Sbjct: 600 RMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGD 659
Query: 529 CHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
CH KF SK+V+R+II+RD+NRFHHF+DG CSC +W
Sbjct: 660 CHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 23/286 (8%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
GR++H+ + + +GS L+ MY + + +F + ++ WN L+ G+A+
Sbjct: 120 GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179
Query: 173 KSEGEKALRTFSEMLREGFEPTH--------------FSYSSVFTALASTGSLEQGKWVH 218
++L F M G S++S+ + S G E+G +
Sbjct: 180 IGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLF 239
Query: 219 AHVIKSG-----GQLVAF---VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
++ G +V+ + N L+DMY+KSG++ A +VF + +R VVSW SM+ G
Sbjct: 240 EQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG 299
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A+ GL +VR F +M + + PN +T C+L AC+ L+ GQ + ++G +
Sbjct: 300 YAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 359
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
VD+ + G L A + + +M E W ++ MH
Sbjct: 360 RHVANALVDMYLKCGALGLA-RLLFDMIPEKDLVSWTVMIAGYGMH 404
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +H HIL + F D + N +++ Y KCG L AR LFD +P KD+V+W
Sbjct: 335 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 394
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFG---RQVH 117
T +I+GY + AI F++M G++P++ + S+L A S +G D+ +G +
Sbjct: 395 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 454
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
C++ + + ++D+ AR + A+ + + + + W AL+ G
Sbjct: 455 NCCIEPKSEHY----ACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 116/268 (43%), Gaps = 29/268 (10%)
Query: 180 LRTFSEMLREGFEP--THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
LR E++ + +P +Y SV A S++ G+ +H+ + + ++ +G+ LV
Sbjct: 84 LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA---- 293
MY G + + ++F+++ V WN ++ G A+ G + ++ F++M GI
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 294 ----------PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT------- 336
+ +++ +++ GL ++G F M G+ + A V+
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNN 263
Query: 337 -FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
+D+ ++G L+ A++ M E + W +++ + L + E++
Sbjct: 264 CLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAG---YAREGLSDMSVRLFHEMEKE 319
Query: 396 DSGPH-ILLANIYASAGRLNDAARARKM 422
D P+ I +A I + L R +++
Sbjct: 320 DLFPNSITMACILPACASLAALERGQEI 347
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 346/567 (61%), Gaps = 24/567 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + VH+ + S+F+ I NT+L+ Y+KCG LD A ++F++M +++V+W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY+++ + AIIL QM + G+K + ++S+L A + D G+ VH +
Sbjct: 321 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN-GKDVHDYIK 379
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
N++V ++L+DMYA+ M+ A +F+ + K+ +SWN ++ GE
Sbjct: 380 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------GE---- 427
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+P + + + A AS +LE+GK +H +++++G V N LVD+Y
Sbjct: 428 ---------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +F+ + +D+VSW M+ G HG G + F +M GI P++V+F+
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL++G +F +MK +EP+ HY VDLL R G L +A KFI +PI
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA 598
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR++ ++EL AER+FEL+P ++G ++LLANIYA A + + R R
Sbjct: 599 PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMR 658
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVA-NDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+ + + G++K P CSW+E K V++FV+ N+ +HP I +++ K+K+ GY P +
Sbjct: 659 EKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKT 718
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L AD+ ++E L HSEKLA+AF L++ PP TI + KN+RVCGDCH KF SK
Sbjct: 719 KYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKE 778
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFHHF+DG+CSC +W
Sbjct: 779 TRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 52/370 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L + + VH+ I ++ D A+ +++ YA CG L E R++FD M K++ W
Sbjct: 109 CAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLW 168
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++S Y++ + +I LF M+ G++ + +S L
Sbjct: 169 NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL--------------------- 207
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
FD++ D ++ +SWN++I+G+ E+ L
Sbjct: 208 --------------------FDKLCD----------RDVISWNSMISGYVSNGLTERGLG 237
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M+ G + + SV A++G+L GK VH+ IKS + NTL+DMY+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 297
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF ++ +R+VVSW SM+ G + G + ++M + G+ + V
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITS 357
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ +G LD G+ +K + + +D+ + G ++ A M ++
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKD 417
Query: 362 TAAVWGALLG 371
+ W ++G
Sbjct: 418 IIS-WNTMVG 426
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 52/227 (22%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y SV A SL GK VH+ + + + +G LV YA G +++ +VF+ +
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 257 LKRDVVS---------------------------------------------------WN 265
K++V WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
SM++G +GL + + +++M+ GI + T + VL C+++G L G+ +L K
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E T +D+ + G LD AL+ +M E W +++
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 326
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 337/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK ++ + V +++ S D ++N +L + KCG + +AR+LFDEMP K++++W
Sbjct: 141 CIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G A LF M + ++++AS AG GRQ+H+ L
Sbjct: 201 NTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRAS-AGLGLIFAGRQLHSCSL 259
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V+V +L+DMY++ ++DA +F + K V WN++IAG+A E+AL
Sbjct: 260 KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALS 319
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ EM G + +F++S + A SLE K HA +++ G L LVD+Y+
Sbjct: 320 MYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYS 379
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IEDA+ VF+ + ++V+SWN+++ G HG G V FE+ML G+ PN VTFL
Sbjct: 380 KWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLA 439
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS++GL D G F M + H ++P HY ++LLGR GLLD A I++ P +
Sbjct: 440 VLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFK 499
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT +W ALL ACR+HKN ELG +AAE+++ + P +++L NIY +GRL +AA
Sbjct: 500 PTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVI 559
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ +K G++ PACSW+E K + F++ D H Q I++K E+ +I + GYVP
Sbjct: 560 QTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDK 619
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L D+QE E L HSEKLA+AF LI+T + + I ++ R+CGDCHSA K + V
Sbjct: 620 FLLPDVDEQE-ERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVT 678
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD +RFHHF+DG CSCGDYW
Sbjct: 679 RREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y ++ +A S+ K V ++I SG ++ N ++ M+ K G + DA ++F+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+++++SWN+++ G G R F M ++ F+ ++ A + GL+ G+
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ K GV + +D+ + G ++ A +MP E T W +++ +H
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP-EKTTVGWNSIIAGYALH 311
>gi|255568506|ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535524|gb|EEF37193.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 420
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 261/328 (79%), Gaps = 1/328 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KCT KLKE ++VHAH+L S FK+D+ +QNTILN YAKCG L EARK+FD+MPVKD+VT
Sbjct: 90 KCTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILNMYAKCGNLGEARKVFDQMPVKDVVT 149
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTALI+GYSQ+D+P++A++LF QML LG +PN FTLSS+LKASG +D GR +HAFC
Sbjct: 150 WTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGVSPSDSN-GRLLHAFC 208
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+KYGY NVYVGS+LLDMYAR +++A F+F L S+NEVSWNALIAG ARK + E A
Sbjct: 209 IKYGYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCARKGDQELAF 268
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
FS+MLRE +PT F+YS V +A AS GSLEQGKWVHA +IKSG +LV FVGNTL+ MY
Sbjct: 269 SFFSKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFVGNTLLGMY 328
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGSIEDA KVF+ L+KRDVVSWNSML G AQHGLG + F +ML G+APN +TFL
Sbjct: 329 AKSGSIEDARKVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFRQMLIIGVAPNDITFL 388
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVE 328
CVLTACSHAGLL EG YF LM+K+ E
Sbjct: 389 CVLTACSHAGLLAEGLHYFNLMRKYKEE 416
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 173/327 (52%), Gaps = 4/327 (1%)
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
DQ + + + R L+P++ TL +L K G+ VHA L + ++ +
Sbjct: 60 DQSGTGLHVLDLIDRASLEPDR-TLYHILFKKCTLFNKLKEGQLVHAHLLNSRFKHDLVI 118
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+++L+MYA+ + +A +F + K+ V+W ALI G+++ + AL F +ML GF
Sbjct: 119 QNTILNMYAKCGNLGEARKVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGF 178
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P HF+ SS+ A + S G+ +HA IK G +VG+ L+DMYA+SG +E+A
Sbjct: 179 RPNHFTLSSLLKASGVSPSDSNGRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALF 238
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+ L R+ VSWN+++ GCA+ G + +F KMLR I P Q T+ VL+AC+ G
Sbjct: 239 IFDGLPSRNEVSWNALIAGCARKGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGS 298
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L++G+ AL+ K G + + T + + ++G ++ A K + ++ W ++L
Sbjct: 299 LEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIEDARKVFDGL-VKRDVVSWNSMLA 357
Query: 372 ACRMH--KNVELGAYAAERIFELDPHD 396
H N+ L + I + P+D
Sbjct: 358 GYAQHGLGNIALLIFRQMLIIGVAPND 384
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/596 (38%), Positives = 357/596 (59%), Gaps = 38/596 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNT-----ILNAYAKCGCLDEARKLFDEMPVK 56
C+HL L+ + +HA+ A + D ++N+ +++ Y CG ++ R +FD + +
Sbjct: 226 CSHLDLLRTGKEIHAY----ALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDR 281
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
+ W A+I+GY+Q++ E A++LF +M GL N T+SS++ A + R+
Sbjct: 282 KIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAY---VRCEGISRK 338
Query: 116 --VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+H + +K G + N Y+ ++L+DMY+R + + +F ++E ++ VSWN +I +
Sbjct: 339 EGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVIC 398
Query: 174 SEGEKALRTFSEMLR-------EG---------FEPTHFSYSSVFTALASTGSLEQGKWV 217
AL EM R +G F+P + +V AS +L +GK +
Sbjct: 399 GRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEI 458
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
HA+ I++ VG+ LVDMYAK G + A +VF+++ R+V++WN ++ HG G
Sbjct: 459 HAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKG 518
Query: 278 KATVRWFEKMLRNG-----IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
K ++ FE M+ G + P +VTF+ + +CSH+G++DEG F MK +HG+EP
Sbjct: 519 KESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAP 578
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY VDL+GRAG ++ A + MP W +LLGACR++ N+E+G AAE +
Sbjct: 579 DHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLL 638
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
+L P + ++LL+NIY+SAG + A R+ MK GVKKEP CSW+E + VH F+A D
Sbjct: 639 QLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGD 698
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
+HPQ +H +SE++K+ GYVPD++ VL D++E+E L HSEKLA+AF +++
Sbjct: 699 LSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILN 758
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TPPG+TI + KN+RVC DCH+A KF SK+ +REII+RD RFHHF+DG CSCGDYW
Sbjct: 759 TPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 197/401 (49%), Gaps = 11/401 (2%)
Query: 5 LKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+++L + +HAH+ G + + + NT++N Y KCG L +A K+FD + +D V+W
Sbjct: 23 IQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWN 82
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAFC 120
++IS + ++ E AI F ML G +P+ FTL S+ A D G+Q+H C
Sbjct: 83 SIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCC 142
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+ W + ++L+ MYA+ ++DDA L E ++ V+WN++I+ ++ +AL
Sbjct: 143 FRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEAL 201
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDM 239
M+ EG +P +++SV A + L GK +HA+ +++ + +FVG+ LVDM
Sbjct: 202 MFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDM 261
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG-KATVRWFEKMLRNGIAPNQVT 298
Y G +E VF+ +L R + WN+M+ G AQ KA + + E G+ N T
Sbjct: 262 YCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATT 321
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
++ A + +G + K G+E +D+ R G + + + M
Sbjct: 322 MSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSME 381
Query: 359 IEPTAAVWGALLGA---CRMHKNVELGAYAAERIFELDPHD 396
+ W ++ + C + L + +RI E +D
Sbjct: 382 DRDIVS-WNTIITSYVICGRSSDALLLLHEMQRIEEKSTYD 421
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 174/370 (47%), Gaps = 31/370 (8%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW--NVYVGSSLLDMYAR 141
M+ G P+ F +VLKA AG + G+Q+HA K+GY +V + ++L++MY +
Sbjct: 1 MIGSGFSPDNFAFPAVLKAV-AGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGK 59
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
+ DA+ +F + +++VSWN++I+ R E E A++ F ML EGFEP+ F+ S+
Sbjct: 60 CGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM 119
Query: 202 FTA---LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
A L L GK +H + G F N L+ MYAK G ++DA+ +
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFED 178
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
RD+V+WNSM++ +Q+ + + M+ G+ P+ VTF VL ACSH LL G+
Sbjct: 179 RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238
Query: 319 FAL-MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
A ++ V VD+ G ++ + + + ++ +W A+
Sbjct: 239 HAYALRTDDVIENSFVGSALVDMYCNCGQVESG-RLVFDSVLDRKIGLWNAM-------- 289
Query: 378 NVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWV 437
+ YA HD +L + A+AG ++A + V C +
Sbjct: 290 ---IAGYAQSE------HDEKALMLFIEMEAAAGLYSNATTMSSI-----VPAYVRCEGI 335
Query: 438 ETKNAVHMFV 447
K +H +V
Sbjct: 336 SRKEGIHGYV 345
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 346/566 (61%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ + VH +++ S ++ D N ++N YAKCG L ++++F M KD V+W
Sbjct: 326 CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 385
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QN + A+ LF +M++ +KP+ T +L S D G+++H
Sbjct: 386 NSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMS-TQLGDLHLGKELHCDLA 443
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G++ N+ V ++L+DMYA+ +M D+ +F +++++ ++WN +IA + LR
Sbjct: 444 KMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLR 503
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
S M EG P + S+ + + QGK +H + K G + VGN L++MY+
Sbjct: 504 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 563
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ ++ +VF + +DVV+W ++++ C +G GK VR F +M GI P+ V F+
Sbjct: 564 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 623
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ ACSH+GL++EG YF MKK + +EP HY VDLL R+ LLD+A FI MP++
Sbjct: 624 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 683
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +++WGALL ACRM + E+ +ERI EL+P D+G ++L++NIYA+ G+ + R
Sbjct: 684 PDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIR 743
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K +K G+KK+P CSW+E +N V++F Q ++K ++ + + GY+ +
Sbjct: 744 KSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQ 803
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D+ E+ L HSE+LA+AF L++T PG+ + + KN+RVC DCH+ K+ SK+V
Sbjct: 804 FVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIV 863
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+RE++VRD NRFH F+DG CSCGDYW
Sbjct: 864 QRELLVRDANRFHVFKDGACSCGDYW 889
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 213/389 (54%), Gaps = 6/389 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A+ +H +L F +D+ + N +++ Y + LD+ARK+F+EMP++D+V+W
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
+LISGY+ N A+ ++ + LG+ P+ +T+SSVL+A G G+ ++ G +H
Sbjct: 185 NSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE--GDIIHGLI 242
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G +V V + LL MY +F+ + D +F + ++ VSWN +I G+++ E+++
Sbjct: 243 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESI 302
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F EM+ + F+P + +S+ A G LE GK+VH ++I SG + N L++MY
Sbjct: 303 KLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 361
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G++ +++VF+ + +D VSWNSM+ Q+G ++ F KM++ + P+ VT++
Sbjct: 362 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYV 420
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ + G L G+ + K G T VD+ + G + +LK M
Sbjct: 421 MLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR 480
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERI 389
W ++ +C ++ LG R+
Sbjct: 481 DIIT-WNTIIASCVHSEDCNLGLRMISRM 508
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 188/365 (51%), Gaps = 13/365 (3%)
Query: 54 PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 113
P ++ W ++I + N A+ L+S+ R+ L+P+ +T SV+ A AG D +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC-AGLLDFEMA 134
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+ +H L G+ ++Y+G++L+DMY RF+ +D A +F + ++ VSWN+LI+G+
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL + G P ++ SSV A GS+E+G +H + K G + V
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N L+ MY K + D ++F++++ RD VSWN+M+ G +Q GL + +++ F +M+ N
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFK 313
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ +T +L AC H G L+ G+ M G E + +++ + G L + +
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPHDSGP----HILLANIYA 408
M + + + W +++ ++ G++ A ++F++ D P +++L ++
Sbjct: 374 FSGMKCKDSVS-WNSMINV-----YIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMST 427
Query: 409 SAGRL 413
G L
Sbjct: 428 QLGDL 432
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 172/395 (43%), Gaps = 50/395 (12%)
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
Q SS+ +A + AT + ++H+ + G +V + L+ YA F ++ +F
Sbjct: 13 QTLFSSISRALASAATTTQL-HKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 71
Query: 153 -TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
A S N WN++I +AL +SE R +P +++ SV A A
Sbjct: 72 RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDF 131
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E K +H V+ G ++GN L+DMY + ++ A KVF + RDVVSWNS+++G
Sbjct: 132 EMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGY 191
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
+G + + + G+ P+ T VL AC G ++EG L++K G++ +
Sbjct: 192 NANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDV 251
Query: 332 -------AHYVTFVDLL-GR-----------------------AGLLDRALKFIREM--P 358
+ Y F L+ GR GL + ++K EM
Sbjct: 252 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ 311
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERI----FELDPHDSGPHILLANIYASAGRLN 414
+P ++L AC ++E G Y + + +E D S +L N+YA G L
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN---ILINMYAKCGNLL 368
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
+ SG+K + + SW + +++++ N
Sbjct: 369 ASQEVF-----SGMKCKDSVSW---NSMINVYIQN 395
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 351/598 (58%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + +HA ++ S + D + + ++ YAKCG EA+++F+ + ++ V+W
Sbjct: 270 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 329
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI G Q + ++ LF+QM + +QF L++++ D GRQ+H+ CL
Sbjct: 330 TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-FNRMDLCLGRQLHSLCL 388
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE------------------------- 156
K G++ + V +SL+ +YA+ + +A F+F+++
Sbjct: 389 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 448
Query: 157 ------SKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTG 209
++N ++WNA++ + + E L+ +S ML ++ P +Y ++F A G
Sbjct: 449 FFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 508
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + H +K+G L V N + MY+K G I +A+K+F+ L +DVVSWN+M+T
Sbjct: 509 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 568
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ ML G P+ ++++ VL+ CSH+GL+ EG+ YF +M + HG+
Sbjct: 569 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 628
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I +MP++PTA VWGALL AC++H N EL AA+
Sbjct: 629 PGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 688
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELD DSG ++LLA IY+ AG+ +D+A+ RK+M++ G+KK P SW+E +N VH+F A
Sbjct: 689 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 748
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+D +HPQ I K E+ EKI +GYV + E HSEKLA+AF +
Sbjct: 749 DDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGI 797
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+S P IHI KN+R+CGDCH+ K S V +RE ++RD RFHHF+ G CSCGDYW
Sbjct: 798 MSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 168/312 (53%), Gaps = 6/312 (1%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
I +N++L YAK +D A + F++M +D+V+W +I+ SQ+ + A+ L +M R
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++ + T +S L A A +G+Q+HA ++ + YV S+L+++YA+
Sbjct: 254 KGVRLDSTTYTSSLTAC-ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 312
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A +F +L+ +N VSW LI G + K++ F++M E F+ +++ +
Sbjct: 313 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 372
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ L G+ +H+ +KSG V N+L+ +YAK G +++AE VF+ + +RD+VSW S
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 432
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKH 325
M+T +Q G +F+ M N +T+ +L A G ++G + Y A++ +
Sbjct: 433 MITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK 488
Query: 326 GVEPEEAHYVTF 337
V P+ YVT
Sbjct: 489 DVTPDWVTYVTL 500
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 38/415 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD-EMPVKDMVT 60
C L AR +H ++ + + +QNT+L+AY CG L +AR+L ++ +++T
Sbjct: 30 CGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVIT 89
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-----RQ 115
+++GY++ +A LF +M R + +S + +G+ + G Q
Sbjct: 90 HNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQ 149
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE------------------- 156
+ K+ + + V ++L+DM+ R +D A LF+ +E
Sbjct: 150 LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG 209
Query: 157 ------------SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++ VSWN +IA ++ +AL EM R+G +Y+S TA
Sbjct: 210 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 269
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A SL GK +HA VI+S Q+ +V + L+++YAK GS ++A++VFN L R+ VSW
Sbjct: 270 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 329
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
++ G Q+ +V F +M +A +Q +++ C + L G+ +L K
Sbjct: 330 TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLK 389
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
G + + L + G L A +F+ E W +++ A N+
Sbjct: 390 SGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI 443
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 39/303 (12%)
Query: 86 RLGLKPNQFT--LSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
R L P+ T L+ L++ G+ GA R +H + G V++ ++LL Y
Sbjct: 11 RCRLLPHAVTQALADALRSCGSRGALAG--ARALHGRLVTVGLASAVFLQNTLLHAYLSC 68
Query: 143 DQMDDAWFLFTA-LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
+ DA L A ++ N ++ N ++ G+A++ A F M R +
Sbjct: 69 GALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV--------AS 120
Query: 202 FTALASTGSLEQGKWVHAHVI---KSGGQLVAF-----------VGNTLVDMYAKSGSIE 247
+ L S S G W+ + + QL+ V LVDM+ + G ++
Sbjct: 121 WNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 180
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A ++F+++ + + NSML G A+ +G+ A + +FE M + V++ ++ A
Sbjct: 181 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHA-IEYFEDMAERDV----VSWNMMIAAL 235
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA----LKFIREMP-IEP 361
S +G + E G M + GV + Y + + R L K IR +P I+P
Sbjct: 236 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 295
Query: 362 TAA 364
A
Sbjct: 296 YVA 298
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/558 (40%), Positives = 343/558 (61%), Gaps = 4/558 (0%)
Query: 12 RIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
R +HA + G N + I + C + A ++F ++ ++ TW +I GY+
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+++ P A+ L+ QM ++P+ T +LKA A D + G +VH+ ++ G++ V
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAI-AKLMDVREGEKVHSIAIRNGFESLV 175
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+V ++L+ MYA + A LF + +N V+WN++I G+A +AL F EM
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 235
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G EP F+ S+ +A A G+L G+ H +++K G GN L+D+YAK GSI A
Sbjct: 236 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 295
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
KVF+ + ++ VVSW S++ G A +G GK + F+++ R G+ P+++TF+ VL ACSH
Sbjct: 296 HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHC 355
Query: 310 GLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G++DEG YF MK+ +G+ P+ HY VDLLGRAGL+ +A +FI+ MP++P A VW
Sbjct: 356 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 415
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGAC +H ++ LG A ++ +L+P SG ++LL+N+YAS R +D + R+ M GV
Sbjct: 416 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 475
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK P S VE +N +H FV D +HPQ I+ K EI++ +K GYVP S+VL+ ++
Sbjct: 476 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEE 535
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+E+E L HSEK+A+AF LI+T G I + KN+RVC DCH A K SKV +REI+VRD
Sbjct: 536 EEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRD 595
Query: 549 TNRFHHFRDGFCSCGDYW 566
+RFHHF+DG CSC DYW
Sbjct: 596 RSRFHHFKDGHCSCKDYW 613
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 160/275 (58%), Gaps = 7/275 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L ++E VH+ + + F++ + +QNT+++ YA CG + A KLF+ M +++VTW ++
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKY 123
I+GY+ N +P A+ LF +M G++P+ FT+ S+L A GA GR+ H + +K
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGAL--ALGRRAHVYMVKV 270
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G D N++ G++LLD+YA+ + A +F +E K+ VSW +LI G A G++AL F
Sbjct: 271 GLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELF 330
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYA 241
E+ R+G P+ ++ V A + G +++G + + +K +V + + +VD+
Sbjct: 331 KELERKGLMPSEITFVGVLYACSHCGMVDEG-FDYFKRMKEEYGIVPKIEHYGCMVDLLG 389
Query: 242 KSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG 275
++G ++ A E + N ++ + V W ++L C HG
Sbjct: 390 RAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 21/230 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R H +++ ++ N +L+ YAKCG + +A K+FDEM K +V+W
Sbjct: 251 CAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSW 310
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATD---DKFGRQVH 117
T+LI G + N + A+ LF ++ R GL P++ T VL A S G D D F R
Sbjct: 311 TSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKE 370
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARK 173
+YG + ++D+ R + A F+ N V W L+ H
Sbjct: 371 ----EYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHL 426
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+ GE A ++ EP H S + L++ + EQ +W H ++
Sbjct: 427 ALGEVARAQLLQL-----EPKH---SGDYVLLSNLYASEQ-RWSDVHKVR 467
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 343/554 (61%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + + +D+ ++ ++L+ Y KC D+A K+FD++P K++V+WTA+I+GY +
Sbjct: 136 IHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGH 195
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
AI F ++L +GLKP+ F+L VL A+ A D G + + G NV+V +
Sbjct: 196 FREAIGAFKKLLEMGLKPDSFSLVKVL-AACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SLLDMY + ++ A +F+A+ K+ VSW+ +I G+A ++AL F +M E +P
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++ V +A A+ G+L+ G W + + ++ +G L+DMY+K GS+ A ++F
Sbjct: 315 DCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIF 374
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ K+D V WN+M+ G + +G KA F + ++GI P++ TF+ +L C+H G ++
Sbjct: 375 TAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVN 434
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ +F MK+ + P HY VDLLGRAGLL+ A + I MP++P A VWGALLG
Sbjct: 435 EGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++HK+ L +++ EL+P +SG ++ L+NIY+ R +A + R MKE ++K
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIR 554
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
ACSW+E VH F+ D +H I+ K E+ ++K +G+VP + VL +++E+E
Sbjct: 555 ACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKE 614
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+AF LI++PP I + KN+RVCGDCH A K SK+ +REII+RDTNRF
Sbjct: 615 HFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRF 674
Query: 553 HHFRDGFCSCGDYW 566
H F DG CSC DYW
Sbjct: 675 HTFIDGSCSCRDYW 688
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 187/372 (50%), Gaps = 2/372 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L + + +HA +L D + N IL G + ++ +F ++ ++ W +
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G D ++AI L+ M G PN FT+ VLKA A D + G ++H+ +K G
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC-ARKLDVRLGLKIHSLLVKAG 144
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
YD +V+V +SLL +Y + D DDA +F + KN VSW A+I G+ +A+ F
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
++L G +P FS V A A G G+W+ ++ SG FV +L+DMY K G
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++E A +F+ + ++D+VSW++M+ G A +GL + + F +M + P+ T + VL+
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+ G LD G +LM ++ +D+ + G + +A + M +
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRV 383
Query: 365 VWGALLGACRMH 376
VW A++ M+
Sbjct: 384 VWNAMMVGLSMN 395
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 7/277 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +I S ++ + ++L+ Y KCG L+ A +F MP KD+V+W
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSW 284
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
+ +I GY+ N P+ A+ LF QM LKP+ +T+ VL A GA D G +
Sbjct: 285 STMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD--LGIWASSLM 342
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + N +G++L+DMY++ + AW +FTA++ K+ V WNA++ G + +
Sbjct: 343 DRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV--IKSGGQLVAFVGNTLVD 238
FS + + G P ++ + G + +G+ ++ + S + G +VD
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG-CMVD 461
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+ ++G + +A ++ N + +K + V W ++L GC H
Sbjct: 462 LLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 338/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ ++ + V +++ S F+ D+ + N +L + KCG + +ARKLFDEMP KD+ +W
Sbjct: 128 CVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASW 187
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ G A LF M + T +++++AS AG + G+Q+H+ L
Sbjct: 188 MTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRAS-AGLGLVQVGKQIHSCAL 246
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + +V +L+DMY++ ++DA +F + K V WN++IA +A E+AL
Sbjct: 247 KRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALS 306
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ EM G HF+ S V A SLE K HA +++ G LVD Y+
Sbjct: 307 LYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYS 366
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +EDA VFNR+ ++V+SWN+++ G HG G+ V FE+ML+ G+ P VTFL
Sbjct: 367 KWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLA 426
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS++GL G F MK+ H V+P HY ++LLGR LLD A IR P +
Sbjct: 427 VLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFK 486
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA +W ALL ACRMHKN+ELG AAE+++ ++P +I+L N+Y S+G+L +AA
Sbjct: 487 PTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGIL 546
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ +K+ G++ PACSWVE K + F+ D +H Q I++K + +I + GY ++
Sbjct: 547 QTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENE 606
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L D++E+ L+ HSEKLA+AF LI+TP + + I + RVCGDCHSA K + V
Sbjct: 607 TLLPDVDEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVT 665
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD +RFHHFR+G CSCGDYW
Sbjct: 666 GREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
E+ +G+ +Y ++ +A S+ K V ++I SG + +V N ++ M+ K G
Sbjct: 108 ELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCG 167
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ DA K+F+ + ++DV SW +M+ G G R F M + TF ++
Sbjct: 168 LMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIR 227
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
A + GL+ G+ + K GV + +D+ + G ++ A +MP E T
Sbjct: 228 ASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMP-EKTTV 286
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGP---HILLANIYASAGRLNDAARARK 421
W +++ + +H E A FE+ DSG H ++ + RL A++
Sbjct: 287 GWNSIIASYALHGYSE---EALSLYFEM--RDSGTTVDHFTISIVIRICARLASLEHAKQ 341
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/537 (41%), Positives = 329/537 (61%), Gaps = 10/537 (1%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++ YA+ G L +AR+LFDE P +D+ TWTA++SGY QN + A F +M +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----E 294
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+ + ++++ D + + WN +++ Y + + A
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN-----TMITGYGQIGDIAQARK 349
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F + ++ VSW A+IAG+A+ E+AL F E+ ++G ++ + A +
Sbjct: 350 FFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAA 409
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
LE GK +H +K G FVGN L+ MY K GSI++A F + ++DVVSWN+ML G
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAG 469
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
A+HG G+ + FE M G+ P+++T + VL+ACSH GLLD G YF ++ K +GV P
Sbjct: 470 YARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIP 529
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY +DLLGRAG L+ A IR MP +P AA WGALLGA R+H N ELG AAE +
Sbjct: 530 TSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMV 589
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
F+++P +SG ++LL+N+YA++GR DA + R M++ GV+K P SWVE +N +H F
Sbjct: 590 FKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVG 649
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HP++ I+ E+ K+++ GYV + VL +++E+E L+ HSEKLA+AF ++
Sbjct: 650 DCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 709
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ P G I + KN+RVC DCHSA K SK+V R II+RD++RFHHF +GFCSCGDYW
Sbjct: 710 TIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 68/406 (16%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DI N ++ + + G D A +F+ MP + V++ A+ISGY +N + A LF QM
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
L + WNV +L Y R ++
Sbjct: 108 ERDL-----------------------------------FSWNV-----MLTGYVRNCRL 127
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
DA LF + K+ VSWN+L++G+A+ ++A F M E S++ + A
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAY 183
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G +E+ + KS L+++ N L+ + + + DA +F+++ RD +SWN
Sbjct: 184 VHNGRIEEACLLFES--KSDWDLISW--NCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ--VTFLCVLTACSHAGLLDEGQGYFALMK 323
+M++G AQ G R F++ +P + T+ +++ G+LDE + +F M
Sbjct: 240 TMISGYAQGGGLSQARRLFDE------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
E E Y + + +D A + MP ++ W ++ ++G
Sbjct: 294 ----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS-WNTMITGYG-----QIGD 343
Query: 384 YA-AERIFELDPH-DSGPHILLANIYASAGRLNDAARARKMMKESG 427
A A + F++ P D + YA +G +A +K+ G
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + +H + + + N +L Y KCG +DEA F+ + KD+V+W
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++GY+++ A+ +F M G+KP++ T+ VL A D+ ++
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG + ++D+ R ++++A L + SW AL+ H GE
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE 583
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
KA +M EP + S L S G+WV A ++S
Sbjct: 584 KAAEMVFKM-----EPQN----SGMYVLLSNLYAASGRWVDADKMRS 621
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 356/598 (59%), Gaps = 34/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCL------------------ 43
C+ + L+E + VH HI S F I + N +L YAKCG L
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 44 -------------DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-GL 89
+EARKLFDEM KD +WTA+++GY + DQPE A++L+S M R+
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+PN FT+S + A+ A + G+++H ++ G D + + SSL+DMY + +D+A
Sbjct: 215 RPNIFTVS-IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEAR 273
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + K+ VSW ++I + + S + FSE++ P ++++ V A A
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ E GK VH ++ + G +F ++LVDMY K G+IE A+ V + K D+VSW S++
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 393
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
GCAQ+G +++F+ +L++G P+ VTF+ VL+AC+HAGL+++G +F ++ +KH +
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
HY VDLL R+G ++ I EMP++P+ +W ++LG C + N++L AA+
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 513
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+F+++P + ++ +ANIYA+AG+ + + RK M+E GV K P SW E K H+F+A
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIA 573
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HP I + RE+ +K+K+ GYVP +S VL + +++E L HSEKLA+AFA+
Sbjct: 574 ADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAI 633
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ST G+ I + KN+R C DCH A KF S + +R+I VRD+ RFH F +G CSCGDYW
Sbjct: 634 LSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 149/323 (46%), Gaps = 34/323 (10%)
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
Q+L KP T ++++ ++ G++VH G+ + + + LL MYA+
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEE-GKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHA------------------------------- 171
+ DA +F + +++ SWN ++ G+A
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 172 RKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+K + E+AL +S M R P F+ S A A+ + +GK +H H++++G
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ ++L+DMY K G I++A +F++++++DVVSW SM+ + + F +++ +
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
PN+ TF VL AC+ + G+ M + G +P + VD+ + G ++ A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 351 LKFIREMPIEPTAAVWGALLGAC 373
+ P +P W +L+G C
Sbjct: 374 KHVVDGCP-KPDLVSWTSLIGGC 395
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
G+K LR ++L +P +Y ++ + T +LE+GK VH H+ SG + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN----- 290
L+ MYAK GS+ DA KVF+ + RD+ SWN M+ G A+ GL + + F++M
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 291 ---------------------------GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
PN T + A + + G+ +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G++ +E + + +D+ G+ G +D A + I + +E W +++
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEA-RNIFDKIVEKDVVSWTSMI 291
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 351/598 (58%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + +HA ++ S + D + + ++ YAKCG EA+++F+ + ++ V+W
Sbjct: 280 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI G Q + ++ LF+QM + +QF L++++ D GRQ+H+ CL
Sbjct: 340 TVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-FNRMDLCLGRQLHSLCL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE------------------------- 156
K G++ + V +SL+ +YA+ + +A F+F+++
Sbjct: 399 KSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKARE 458
Query: 157 ------SKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTG 209
++N ++WNA++ + + E L+ +S ML ++ P +Y ++F A G
Sbjct: 459 FFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + H +K+G L V N + MY+K G I +A+K+F+ L +DVVSWN+M+T
Sbjct: 519 ANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ ML G P+ ++++ VL+ CSH+GL+ EG+ YF +M + HG+
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I +MP++PTA VWGALL AC++H N EL AA+
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 698
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELD DSG ++LLA IY+ AG+ +D+A+ RK+M++ G+KK P SW+E +N VH+F A
Sbjct: 699 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 758
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+D +HPQ I K E+ EKI +GYV + E HSEKLA+AF +
Sbjct: 759 DDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGI 807
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+S P IHI KN+R+CGDCH+ K S V +RE ++RD RFHHF+ G CSCGDYW
Sbjct: 808 MSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 34/386 (8%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N ++N YAK G L +A +LFD MP +D+ +W L+SGY Q + + + F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 86 RLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
R G PN FT V+K+ GA + Q+ K+ + + V ++L+DM+ R
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRE-LAPQLLGLFWKFDFWGDPDVETALVDMFVRCGY 188
Query: 145 MDDAWFLFTALE-------------------------------SKNEVSWNALIAGHARK 173
+D A LF+ +E ++ VSWN +IA ++
Sbjct: 189 VDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQS 248
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL EM R+G +Y+S TA A SL GK +HA VI+S Q+ +V
Sbjct: 249 GRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ L+++YAK GS ++A++VFN L R+ VSW ++ G Q+ +V F +M +A
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+Q +++ C + L G+ +L K G + + L + G L A +F
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EF 427
Query: 354 IREMPIEPTAAVWGALLGACRMHKNV 379
+ E W +++ A N+
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNI 453
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 168/312 (53%), Gaps = 6/312 (1%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
I +N++L YAK +D A + F++M +D+V+W +I+ SQ+ + A+ L +M R
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 263
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++ + T +S L A A +G+Q+HA ++ + YV S+L+++YA+
Sbjct: 264 KGVRLDSTTYTSSLTAC-ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 322
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A +F +L+ +N VSW LI G + K++ F++M E F+ +++ +
Sbjct: 323 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 382
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ L G+ +H+ +KSG V N+L+ +YAK G +++AE VF+ + +RD+VSW S
Sbjct: 383 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTS 442
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKH 325
M+T +Q G +F+ M N +T+ +L A G ++G + Y A++ +
Sbjct: 443 MITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK 498
Query: 326 GVEPEEAHYVTF 337
V P+ YVT
Sbjct: 499 DVTPDWVTYVTL 510
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
G +AL ++ G F +++ A S G+L + + IK + N
Sbjct: 22 GARALH--GRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITH---NI 76
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA-P 294
+++ YAK GS+ DAE++F+R+ +RDV SWN++++G Q + F M R+G + P
Sbjct: 77 MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N TF CV+ +C G + L K + VD+ R G +D A +
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
++ PT ++L ++ +A E ++ D ++ + +GR+
Sbjct: 197 SQIE-RPTIFCRNSMLAGYAKLYGID---HAIEYFEDMAERDVVSWNMMIAALSQSGRVR 252
Query: 415 DAARARKMMKESGVK 429
+A M GV+
Sbjct: 253 EALGLVVEMHRKGVR 267
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/560 (39%), Positives = 341/560 (60%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+E +H I + M+N ++N Y +C D+AR +FD++ + ++++W ++I
Sbjct: 378 LEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGI 437
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y Q ++ ++A+ LF M + G++P++ ++L A G + + + VH + G
Sbjct: 438 YVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIG-SHGRTRKLVHQCVEESGLGG 496
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL++MYA+ ++D A + ++ + +WN LI G+A +AL + ++
Sbjct: 497 SPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
E ++ SV A S+ SL +GK +H++ ++ G V N L +MY+K GS+E
Sbjct: 557 LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSME 616
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A ++F+ + R VSWN ML AQHG + ++ KM + G+ N +TF+ VL++CS
Sbjct: 617 NARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCS 676
Query: 308 HAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
HAGL+ EG YF +L G+E + HY VDLLGRAG L A K+I +MP+EP W
Sbjct: 677 HAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTW 736
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
+LLGACR+ K+++ G AA ++ ELDP +S ++L+NIY+ G +AA+ R+ M
Sbjct: 737 ASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASR 796
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
VKK P S ++ KN VH F D +HP+ A I+ K E+ +++ GYVPD+ VL
Sbjct: 797 RVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDV 856
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D++++E+ L HSEKLA+AF LISTP S++HI KN+RVC DCH+A KF SK+ REI+V
Sbjct: 857 DEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVV 916
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD +RFHHFRDG CSC DYW
Sbjct: 917 RDNHRFHHFRDGSCSCKDYW 936
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 199/381 (52%), Gaps = 6/381 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++L++ +VHA L F + + +LN Y KCG L +A+ +F+EM K++VTW
Sbjct: 68 CGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTW 127
Query: 62 TALISGYS-QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
A++ YS Q + A+ LF++ML G+K N T +VL S + G+ +H+
Sbjct: 128 NAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLN-SVVDPDALRKGKFIHSCV 186
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + +V+V ++L++ Y + + DA +F + ++ +WN++I+ ++ +A
Sbjct: 187 RESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAF 246
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M +EG ++ S+ A + +L+ GK V + ++ +L FVG L+ MY
Sbjct: 247 FIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMY 306
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ S EDA +VF R+ + ++++W++++T A HG +R+F M + GI PN+VTF+
Sbjct: 307 ARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFI 366
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L + L+E L+ +HG++ V++ GR D A ++ +
Sbjct: 367 SLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL- 425
Query: 361 PTAAVWGALLG---ACRMHKN 378
P W +++G C H +
Sbjct: 426 PNLISWNSMIGIYVQCERHDD 446
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 232/498 (46%), Gaps = 25/498 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L++ + +H+ + S D+ + ++N Y KCG L +ARK+FD MP + + TW ++IS
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS +++ A +F +M + G + ++ T S+L A T + G+ V + ++
Sbjct: 236 YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETL-QHGKHVRESISETSFEL 294
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++VG++L+ MYAR +DA +F ++ N ++W+A+I A +ALR F M
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+EG P ++ S+ + LE+ +H + + G + N LV++Y + S +
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DA VF++L +++SWNSM+ Q ++ F M + GI P++V F+ +L AC+
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+ +++ G+ + V++ +AG LD A ++EM E W
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWN 533
Query: 368 ALLGACRMHKNVELGAYAAERI-FELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
L+ +H A +++ E P D I + N S+ L + E
Sbjct: 534 VLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVEC 593
Query: 427 GVKKE-----------PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
G+ + C +E NA +F D+ P R+ + W + + Q G
Sbjct: 594 GLDSDVIVKNALTNMYSKCGSME--NARRIF----DSMPIRSAV--SWNGMLQAYAQHG- 644
Query: 476 VPDSSHVLSYADQQEREA 493
+S VL + E+E
Sbjct: 645 --ESEEVLKLIRKMEQEG 660
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 155/281 (55%), Gaps = 2/281 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y++CG L +A F ++ +++V+W +IS YS + A+ LF ML G+ PN TL
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+VL + G+ + + G VHA L+ G+ N V ++LL+MY + + DA +F +
Sbjct: 62 VAVLNSCGS-FRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 157 SKNEVSWNALIAGHARKSEGEK-ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
KN V+WNA++ ++ + K A+ F+ ML EG + ++ +V ++ +L +GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
++H+ V +S L FV LV+ Y K GS+ DA KVF+ + R V +WNSM++ +
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
F++M + G ++VTFL +L AC + L G+
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGK 281
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 145/272 (53%), Gaps = 3/272 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + ++VH + S +Q +++N YAK G LD A + EM + + W
Sbjct: 473 CTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAW 532
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+GY+ + + A+ + ++ + ++ T SVL A +T G+ +H+ +
Sbjct: 533 NVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNAC-TSSTSLAEGKMIHSNAV 591
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D +V V ++L +MY++ M++A +F ++ ++ VSWN ++ +A+ E E+ L+
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLK 651
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
+M +EG + ++ SV ++ + G + +G ++ H+ G ++ LVD+
Sbjct: 652 LIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 711
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC 271
++G +++AEK +++ L+ +V+W S+L C
Sbjct: 712 GRAGKLQEAEKYISKMPLEPGIVTWASLLGAC 743
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY+R + DA F + ++N VSWN +I+ ++ ++AL F ML EG P +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+V + S L G VHA ++ G V L++MY K G++ DA+ VF +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 258 KRDVVSWNSMLTGCAQHGLG-KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+++VV+WN+ML + G K V F +ML G+ N +TFL VL + L +G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ +++ + V+ + G L A K MP + W +++ A
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR-SVGTWNSMISA 235
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L E +++H++ + +D+ ++N + N Y+KCG ++ AR++FD MP++ V+W
Sbjct: 574 CTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSW 633
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ Y+Q+ + E + L +M + G+K N T SVL + + + H+
Sbjct: 634 NGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSL-- 691
Query: 122 KYGYDWNVYVGSS----LLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEG 176
G+D + V + L+D+ R ++ +A + + V+W +L+ + +
Sbjct: 692 --GHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDL 749
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
++ ++L +P + S S V + + S E+G W +A
Sbjct: 750 DRGKLAAGKLLE--LDPGNSSASVVLSNIYS----ERGDWKNA 786
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 345/567 (60%), Gaps = 24/567 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + VH+ + S+F+ I NT+L+ Y+KCG LD A ++F++M +++V+W
Sbjct: 123 CAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 182
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY+++ + AIIL QM + G+K + ++S+L A + D G+ VH +
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDN-GKDVHDYIK 241
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
N++V ++L+DMYA+ M+ A +F+ + K+ +SWN ++ GE
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------GE---- 289
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+P + + + A AS +LE+GK +H +++++G V N LVD+Y
Sbjct: 290 ---------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 340
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +F+ + +D+VSW M+ G HG G + F +M GI P++V+F+
Sbjct: 341 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 400
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL++G +F +MK +EP+ HY VDLL R G L +A KFI +PI
Sbjct: 401 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA 460
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR++ ++EL AER+FEL+P ++G ++LLANIYA A + + R R
Sbjct: 461 PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMR 520
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVA-NDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+ + + G++K P CSW+E K V++FV+ N+ +HP I +++ K+K+ GY P +
Sbjct: 521 EKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKT 580
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L AD+ ++E L HSEKLA+AF L++ PP TI + KN+RVCGDCH KF SK
Sbjct: 581 KYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKE 640
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFHHF+DG+CSC +W
Sbjct: 641 TRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 52/339 (15%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++ YA CG L E R++FD M K++ W ++S Y++ + +I LF M+ G++
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+ +S L FD++ D
Sbjct: 62 RSESASEL-----------------------------------------FDKLCD----- 75
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
++ +SWN++I+G+ E+ L + +M+ G + + SV A +G+L
Sbjct: 76 -----RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLS 130
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
GK VH+ IKS + NTL+DMY+K G ++ A +VF ++ +R+VVSW SM+ G
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
+ G + ++M + G+ + V +L AC+ +G LD G+ +K + +
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+D+ + G ++ A M ++ + W ++G
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIIS-WNTMVG 288
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/565 (39%), Positives = 342/565 (60%), Gaps = 10/565 (1%)
Query: 7 KLKEARI-VHAHILGS---AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+L+E R+ + H L + + +D + I + Y+KCG + LF E D+V +
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFI-SLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
A+I GY+ N + E ++ LF +++ G + TL S++ SG +H +CLK
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG----HLMLIYAIHGYCLK 347
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ + V ++L +Y++ ++++ A LF K+ SWNA+I+G+ + E A+
Sbjct: 348 SNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F EM + F P + + + +A A G+L GKWVH V + + +V L+ MYAK
Sbjct: 408 FREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAK 467
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
GSI +A ++F+ + K++ V+WN+M++G HG G+ + F +ML +GI P VTFLCV
Sbjct: 468 CGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 303 LTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L ACSHAGL+ EG F +++ ++G EP HY VD+LGRAG L RAL+FI M IEP
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP 587
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
++VW LLGACR+HK+ L +E++FELDP + G H+LL+NI+++ AA R+
Sbjct: 588 GSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQ 647
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
K+ + K P + +E H+F + D +HPQ I++K ++ K+++ GY P++
Sbjct: 648 TAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETEL 707
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
L +++ERE ++VHSE+LA+AF LI+T PG+ I I KN+RVC DCH+ K SK+ E
Sbjct: 708 ALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITE 767
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R I+VRD NRFHHF+DG CSCGDYW
Sbjct: 768 RVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 206/449 (45%), Gaps = 41/449 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
HA I+ F+NDI++ + + G + AR +F + D+ + L+ G+S N+
Sbjct: 39 THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNES 98
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
P +++ +F+ + + LKPN T + + A+ +G DD+ GR +H + G D + +G
Sbjct: 99 PHSSLSVFAHLRKSTDLKPNSSTYAFAISAA-SGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+++ MY +F +++DA +F + K+ + WN +I+G+ + ++++ F +++ E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC- 216
Query: 193 PTHFSYSSVFTALASTGSLEQ---GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
T +++ L + L++ G +H+ K+G +V + +Y+K G I+
Sbjct: 217 -TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+F K D+V++N+M+ G +G + ++ F++++ +G T + ++ H
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 310 GLLDEGQGY-----------------FALMKKHGVE---------PEEA--HYVTFVDLL 341
L+ GY K + +E PE++ + +
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 342 GRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
+ GL + A+ REM P +L AC + LG + + + D +S
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD-FESS 454
Query: 399 PHI--LLANIYASAGRLNDAARARKMMKE 425
++ L +YA G + +A R +M +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH + + F++ I + ++ YAKCG + EAR+LFD M K+ VTW
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGAT---DDKFGRQVH 117
+ISGY + Q + A+ +F +ML G+ P T VL A S AG D+ F +H
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEG 176
+YG++ +V + ++D+ R + A A+ + S W L+ G R +
Sbjct: 550 ----RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL-GACRIHKD 604
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
RT SE L E +P + Y + + + S
Sbjct: 605 TNLARTVSEKLFE-LDPDNVGYHVLLSNIHS 634
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 332/543 (61%), Gaps = 5/543 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+ M N+++ CG +++A +LF M KD V+W A+I G +QN + AI F +M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 86 RLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
GLK +Q+ SVL A G GA ++ G+Q+HA ++ + ++YVGS+L+DMY +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINE--GKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A +F ++ KN VSW A++ G+ + E+A++ F +M R G +P H++ +A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+ SLE+G H I SG V N+LV +Y K G I+D+ ++FN + RD VSW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-K 323
+M++ AQ G T++ F+KM+++G+ P+ VT V++ACS AGL+++GQ YF LM
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
++G+ P HY +DL R+G L+ A++FI MP P A W LL ACR N+E+G
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AAE + ELDPH + LL++IYAS G+ + A+ R+ M+E VKKEP SW++ K +
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F A+D++ P I+ K E++ KI GY PD+S V ++ + L HSE+LA
Sbjct: 621 HSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLA 680
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LI P G I + KN+RVC DCH+A K S V REI+VRD RFH F+DG CSCG
Sbjct: 681 IAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCG 740
Query: 564 DYW 566
D+W
Sbjct: 741 DFW 743
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 186/377 (49%), Gaps = 41/377 (10%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR-LGL 89
N +L AY+K G + E F+++P +D VTW LI GYS + A+ ++ M+R
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ TL ++LK S + G+Q+H +K G++ + VGS LL MYA + DA
Sbjct: 136 NLTRVTLMTMLKLSSSNG-HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 150 FLFTALESKN------------------------------EVSWNALIAGHARKSEGEKA 179
+F L+ +N VSW A+I G A+ ++A
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM +G + + + SV A G++ +GK +HA +I++ Q +VG+ L+DM
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K + A+ VF+R+ +++VVSW +M+ G Q G + V+ F M R+GI P+ T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKFIR 355
++AC++ L+EG + G+ HYVT V L G+ G +D + +
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGL----IHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 356 EMPIEPTAAVWGALLGA 372
EM + A W A++ A
Sbjct: 431 EMNVR-DAVSWTAMVSA 446
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 154/277 (55%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + E + +HA I+ + F++ I + + +++ Y KC CL A+ +FD M K++V+W
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY Q + E A+ +F M R G+ P+ +TL + A A + + G Q H +
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC-ANVSSLEEGSQFHGKAI 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G V V +SL+ +Y + +DD+ LF + ++ VSW A+++ +A+ + ++
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F +M++ G +P + + V +A + G +E+G+ + ++ S +V +G + ++D+
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ-RYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
+++SG +E+A + N + D + W ++L+ C G
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 156/389 (40%), Gaps = 79/389 (20%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++ ++LL Y++ + + F L ++ V+WN LI G++ A++ ++ M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 188 RE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R+ T + ++ +S G + GK +H VIK G + VG+ L+ MYA G I
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 247 EDAEKVFN------------------------------RLLKRDVVSWNSMLTGCAQHGL 276
DA+KVF R +++D VSW +M+ G AQ+GL
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG--------------------- 315
K + F +M G+ +Q F VL AC G ++EG
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 316 --------------QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP--- 358
+ F MK+ V A V + G+ G + A+K +M
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY----GQTGRAEEAVKIFLDMQRSG 366
Query: 359 IEPTAAVWGALLGACRMHKNVELGA-YAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
I+P G + AC ++E G+ + + I H L +Y G ++D+
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMF 446
R + E V+ A SW +A F
Sbjct: 427 R---LFNEMNVRD--AVSWTAMVSAYAQF 450
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+E H + S + + + N+++ Y KCG +D++ +LF+EM V+D V+W
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++S Y+Q + I LF +M++ GLKP+ TL+ V+ A +K R
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
+YG ++ S ++D+++R ++++A + + + W L++ K E
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG- 559
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+ +E L E +P H + ++ +++ ++ +GKW ++ G
Sbjct: 560 KWAAESLIE-LDPHHPAGYTLLSSIYAS----KGKWDSVAQLRRG 599
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 13/219 (5%)
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
K +H ++I++ F+ N +V YA S A +VF+R+ + ++ SWN++L ++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 275 GLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEA 332
GL FEK+ R+G VT+ ++ S +GL+ + Y +M+
Sbjct: 86 GLISEMESTFEKLPDRDG-----VTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 333 HYVTFVDLLGRAGLLDRALKF---IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+T + L G + + + ++ E V LL M+ NV + A +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL---YMYANVGCISDAKKVF 197
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ LD ++ + L + G + DA + + M++ V
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/551 (39%), Positives = 338/551 (61%), Gaps = 7/551 (1%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F++D + ++ AYA L AR++FDE PVK++ W A++ + D E A+ +
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFG----RQVHAFCLKYGYDWNVYVGSSLLDM 138
M RLG+ + ++ + LKA A + R++HA ++ GY + +V ++L+D
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399
Query: 139 YARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE--PTHF 196
YA+ + A +FT++ +N VSW+A+I +A+ A++ F EM+ + P
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ SV A A +L QGK +HA++++ G L+ V N L+ MY K G +E +FN +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 257 -LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+R+VVSWNS+++G HG G+ +++ FE+M+ GI+PN +TF+ VL ACSH GL+++G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+ F M ++ V P HY VDLLGRAG LD A++ I+ M I+P+ VWG+LLGACR+
Sbjct: 580 KKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRI 639
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H +VE A +F+L+P ++G ++LLA+IYA A N +++++E ++K P CS
Sbjct: 640 HGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCS 699
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E K ++ FV+ D+ +PQ + E ++K GYVPD+ VL +++E+E L
Sbjct: 700 WIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERIL 759
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AF LI T G I I KN+R+C DCHS KF SK +REI+VRD NRFHHF
Sbjct: 760 LGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHF 819
Query: 556 RDGFCSCGDYW 566
R+G CSC DYW
Sbjct: 820 RNGVCSCRDYW 830
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 152/277 (54%), Gaps = 5/277 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+HL R +HAH + + + T+++ YAK G + A ++F MP +++V+W+
Sbjct: 366 SHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWS 425
Query: 63 ALISGYSQNDQPENAIILFSQMLR--LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
A+I Y++N++P +AI +F +M+ L PN T+ SVL A AG G+ +HA+
Sbjct: 426 AMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHAC-AGVNALGQGKVLHAYI 484
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
L+ G+D V V ++L+ MY + ++ ++F + +N VSWN+LI+G+ G ++
Sbjct: 485 LRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRES 544
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L+ F EM+ EG P ++ SV A + G +EQGK + +++ A +VD+
Sbjct: 545 LQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDL 604
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++G +++A ++ + ++ W S+L C HG
Sbjct: 605 LGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHG 641
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C + L + +++HA+IL F +++ N ++ Y KCGCL+ R +F+ + +++V+
Sbjct: 468 CAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVS 527
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
W +LISGY + ++ +F +M+ G+ PN T SVL A S G + G+++
Sbjct: 528 WNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQ--GKKLFES 585
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNAL-----IAGHARK 173
++Y + ++D+ R ++D+A L ++ + W +L I GH
Sbjct: 586 MVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEY 645
Query: 174 SE 175
+E
Sbjct: 646 AE 647
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 350/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VH+ + + F + NT+L+ Y+KCG LD A+ +F EM + +V++
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY++ A+ LF +M G+ P+ +T+++VL D+ G++VH +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE-GKRVHEWIK 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ ++++V ++L+DMYA+ M +A +F+ + K+ +SWN +I G+++ +AL
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 182 TFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ +L E F P + + V A AS + ++G+ +H +++++G V N+LVDMY
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G++ A +F+ + +D+VSW M+ G HG GK + F +M + GI ++++F+
Sbjct: 545 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV 604
Query: 301 CVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSH+GL+DEG +F +M+ +EP HY VD+L R G L +A +FI MPI
Sbjct: 605 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 664
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
P A +WGALL CR+H +V+L AE++FEL+P ++G ++L+ANIYA A + R
Sbjct: 665 PPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRL 724
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK + + G++K P CSW+E K V++FVA D ++P+ I R++ ++ + GY P +
Sbjct: 725 RKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLT 784
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L A++ E+E L HSEKLA+A +IS+ G I + KN+RVCGDCH KF SK+
Sbjct: 785 KYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKL 844
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFH F+DG CSC +W
Sbjct: 845 TRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 199/378 (52%), Gaps = 9/378 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L+ + +H IL S F ++ N+++ Y K +D ARK+FDEM +D+++W
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQVHAF 119
++I+GY N E + +F QML G++ + T+ SV AG D + GR VH+
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF----AGCADSRLISLGRAVHSI 321
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K + ++LLDMY++ +D A +F + ++ VS+ ++IAG+AR+ +A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F EM EG P ++ ++V A L++GK VH + ++ FV N L+DM
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVT 298
YAK GS+++AE VF+ + +D++SWN+++ G +++ + F +L +P++ T
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
CVL AC+ D+G+ + ++G + + VD+ + G L A ++
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 359 IEPTAAVWGALLGACRMH 376
+ + W ++ MH
Sbjct: 562 SKDLVS-WTVMIAGYGMH 578
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 188/371 (50%), Gaps = 2/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K LK+ + V I G+ F D + + + Y CG L EA ++FDE+ ++ + W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L++ +++ +I LF +M+ G++ + +T S V K S + G Q+H F L
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK-SFSSLRSVHGGEQLHGFIL 222
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ VG+SL+ Y + ++D A +F + ++ +SWN++I G+ EK L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML G E + SVF A + + G+ VH+ +K+ NTL+DMY+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A+ VF + R VVS+ SM+ G A+ GL V+ FE+M GI+P+ T
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL C+ LLDEG+ +K++ + + +D+ + G + A EM ++
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 362 TAAVWGALLGA 372
+ W ++G
Sbjct: 463 IIS-WNTIIGG 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 12/353 (3%)
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ ++ ENA+ L + + P TL SVL+ A + K G++V F G+
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLC-ADSKSLKDGKEVDNFIRGNGFVI 127
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +GS L MY + +A +F ++ + + WN L+ A+ + ++ F +M+
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G E +++S V + +S S+ G+ +H ++KSG VGN+LV Y K+ ++
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A KVF+ + +RDV+SWNS++ G +GL + + F +ML +GI + T + V C+
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+ L+ G+ ++ K E+ T +D+ + G LD A REM +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+ G R L A + E++ P ++Y LN AR R
Sbjct: 368 MIAGYAREG----LAGEAVKLFEEMEEEGISP-----DVYTVTAVLNCCARYR 411
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/574 (41%), Positives = 348/574 (60%), Gaps = 18/574 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDM 58
CT L + + +H+ L ++D + +++ YAK L AR++F+ MP ++
Sbjct: 265 CTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNV 324
Query: 59 VTWTALISGYSQNDQPENAI-ILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+ WTAL+SGY Q +N + ILF +ML G++PN T SS+LKA A D GRQ+H
Sbjct: 325 MAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKAC-ANLGDQDSGRQIH 383
Query: 118 AFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
C+K D NV VG++L+ MYA +++A F L KN VS++ + G R +
Sbjct: 384 THCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSN-- 440
Query: 177 EKALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
T+ + E E + F++ S+ +A AS G L +G+ +HA +K+G +GN
Sbjct: 441 -----TYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGN 495
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+LV MY++ G + DA +VF+ + +V+SW SM++G A+HG + F M+ G+ P
Sbjct: 496 SLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKP 555
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKF 353
N VT++ VL+ACSHAGL+ EG+ +F +M+KH G+ P HY VDLLGR+GL++ AL F
Sbjct: 556 NDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDF 615
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I EMP + A VW LLGAC+ H N+++G AA + +L+P D P++LL+N+YA AG
Sbjct: 616 INEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLW 675
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
+ AR R +M++ + KE SW+ N +H F A D +HPQ I+ K + +IK +
Sbjct: 676 DQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVM 735
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS-TPPGSTIHIKKNIRVCGDCHSA 532
GYVPD+S VL + +E L HSEK+A+AF LIS T I I KN+RVC DCHSA
Sbjct: 736 GYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSA 795
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ SK REII+RD+NRFH +DG CSCG+YW
Sbjct: 796 LKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 172/316 (54%), Gaps = 11/316 (3%)
Query: 11 ARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALIS 66
R + H+L GS + D + N++L Y+KC + AR +FD MPV +D+V+WTA+ S
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
S+N A+ LF + L GL PN FTL + +A A G V K G+
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF- 184
Query: 127 W--NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
W +V VG +L+DM+A+ + +F L + V W LI +A+ ++A+ F
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS- 243
+ML GF+P ++ SS+ +A GS G+ +H+ ++ G + + V LVDMYAKS
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSH 304
Query: 244 --GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR-WFEKMLRNGIAPNQVTFL 300
S+ +A +VFNR+ K +V++W ++L+G Q G V F KML GI PN +T+
Sbjct: 305 NGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYS 364
Query: 301 CVLTACSHAGLLDEGQ 316
+L AC++ G D G+
Sbjct: 365 SMLKACANLGDQDSGR 380
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 191/349 (54%), Gaps = 15/349 (4%)
Query: 18 ILGSAFK-----NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
+LG FK D+++ +++ +AK G L R++FD + + +V WT LI+ Y+Q+
Sbjct: 175 VLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSG 234
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ LF ML G +P+Q+TLSS+L A + + G+Q+H+ L+ G + + V
Sbjct: 235 YSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGS-FRLGQQLHSLALRLGLESDSCVS 293
Query: 133 SSLLDMYARF---DQMDDAWFLFTALESKNEVSWNALIAGHA-RKSEGEKALRTFSEMLR 188
L+DMYA+ + +A +F + N ++W AL++G+ R S+ + + F +ML
Sbjct: 294 CGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLN 353
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
EG P H +YSS+ A A+ G + G+ +H H +KS + VGN LV MYA+SGSIE+
Sbjct: 354 EGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEE 413
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A F++L ++++VS++ L G G++ ++ R + + TF +++A +
Sbjct: 414 ARHAFDQLYEKNMVSFSGNLD-----GDGRSNTYQDYQIERMELGISTFTFGSLISAAAS 468
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
G+L +GQ AL K G + A + V + R G L A + EM
Sbjct: 469 VGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 12/272 (4%)
Query: 109 DDKFGRQVHAFCLKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALES--KNEVSWN 164
D GR + L+ G + + V +SLL +Y++ + A +F + ++ VSW
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA-LASTGSLEQGKWVHAHVIK 223
A+ + +R +ALR F E L EG P F+ + A AS G V V K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 224 SG--GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
G G V+ VG L+DM+AK+G + +VF+ L +R VV W ++T AQ G V
Sbjct: 182 LGFWGTDVS-VGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAV 240
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL 341
F ML NG P+Q T +L+AC+ G GQ +L + G+E + VD+
Sbjct: 241 ELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMY 300
Query: 342 GRA---GLLDRALKFIREMPIEPTAAVWGALL 370
++ L A + MP A W ALL
Sbjct: 301 AKSHNGQSLHNAREVFNRMPKHNVMA-WTALL 331
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/537 (40%), Positives = 331/537 (61%), Gaps = 11/537 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N ++ YA+ G L EAR+LF+E+P++D+ WTA++SG+ QN + A +F +M +
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----E 305
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+ + ++++ +K + WN V YA+ +D A
Sbjct: 306 KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNIDQAKI 360
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + ++ +SW A+I+G+A+ + E+AL F +M R+G + + ++ A +
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
LE GK +H ++K+G Q GN L+ MY K GSIE+A VF + ++D+VSWN+M+ G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
A+HG GK + FE M + I P+ VT + VL+ACSH G +D+G YF ++ + +G+
Sbjct: 481 YARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITA 539
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY +DLLGRAG LD AL ++ MP P AA WGALLGA R+H + ELG AAE++
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV 599
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
FE++P +SG ++LL+N+YA++GR + R M++ GVKK P SWVE +N H+F
Sbjct: 600 FEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVG 659
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HP+ I+ E+ ++K+ G+V + VL +++E+E L+ HSEKLA+AF ++
Sbjct: 660 DCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 719
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S PPG I + KN+RVC DCH+A K SK+ +R+IIVRD+NRFHHF +G CSCGDYW
Sbjct: 720 SIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 182/405 (44%), Gaps = 64/405 (15%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+DI N ++AY + G + A +F+ M + VT+ A+ISGY N++ + A +F +M
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
P++ +S WNV +L Y +
Sbjct: 118 ------PDRDLIS-----------------------------WNV-----MLSGYVKNGN 137
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A LF + K+ VSWNA+++G A+ E+A + F +ML + S++ + +A
Sbjct: 138 LSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSA 193
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
G +E + + K ++V++ N L+ Y + ++DA +F+R+ RD +SW
Sbjct: 194 YVQNGRIEDARRLFDS--KMDWEIVSW--NCLMGGYVRKKRLDDARSLFDRMPVRDKISW 249
Query: 265 NSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
N M+TG AQ+GL R FE++ +R+ A + +++ G+LDE F M
Sbjct: 250 NIMITGYAQNGLLSEARRLFEELPIRDVFA-----WTAMVSGFVQNGMLDEATRIFEEMP 304
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
E E + + ++ +++A + +MP T++ W ++ N++
Sbjct: 305 ----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS-WNTMVTGYAQCGNID--- 356
Query: 384 YAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
A+ +F E+ D + + YA +G+ +A MK G
Sbjct: 357 -QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + +H ++ + F+ N +L Y KCG ++EA +F+++ KD+V+W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ + A+ LF M ++ +KP+ TL VL A DK ++
Sbjct: 475 NTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQ 533
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG N + ++D+ R ++D+A L ++ + +W AL+ H GE
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
KA EM EP + S L S G+W ++S
Sbjct: 594 KAAEKVFEM-----EPDN----SGMYVLLSNLYAASGRWREVREMRS 631
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/603 (38%), Positives = 353/603 (58%), Gaps = 42/603 (6%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN---AYAKCGCLDEARKLFDEMPVKD 57
+C+ ++LK+ +HA +L + D L+ + L A+ +FD D
Sbjct: 23 RCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPD 79
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
W +I G+S +D+PE +++L+ +ML N +T S+LKA S A ++ Q+
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET--TQI 137
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYA----------RFD---------------------QM 145
HA K GY+ +VY +SL++ YA FD +M
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D A LF + KN +SW +I+G+ + ++AL+ F EM EP + S ++ +A
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A G+LEQGKW+H+++ K+ ++ + +G L+DMYAK G +E+A +VF + K+ V +W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
++++G A HG G+ + F +M + GI PN +TF VLTACS+ GL++EG+ F M++
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ ++P HY VDLLGRAGLLD A +FI+EMP++P A +WGALL ACR+HKN+ELG
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
E + +DP+ G ++ ANI+A + + AA R++MKE GV K P CS + + H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD-SSHVLSYADQQEREAKLQVHSEKLA 503
F+A D +HP+ I KWR + K+++ GYVP+ +L D EREA + HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+ + LI T PG+ I I KN+RVC DCH K SK+ +R+I++RD RFHHFRDG CSCG
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 564 DYW 566
DYW
Sbjct: 618 DYW 620
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/575 (40%), Positives = 348/575 (60%), Gaps = 21/575 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VH +++ + F ++++ N+++ ++ GC DEA +F +M KD+V+W
Sbjct: 306 CEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSW 365
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY +N PE A+ ++ M G+ P++ T++SVL A DK G +H F
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDK-GIMLHEFAD 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G V V +SL+DMY++ +D A +F + +KN +SW ++I G +AL
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ +P + SV +A A G+L GK +HAH +++G F+ N L+DMY
Sbjct: 485 FFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYV 543
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G +E A FN ++DV SWN +LTG AQ G G V F KM+ + + P+++TF
Sbjct: 544 RCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS +G++ +G YF M+ K + P HY + VDLLGRAG L+ A +FI++MPI+
Sbjct: 603 LLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPID 662
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+WGALL ACR+++NVELG AA+ IFE+D G +ILL N+YA +G+ ++ AR R
Sbjct: 663 PDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVR 722
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M+E+ + +P CSWVE VH F+ DD HPQ I+ EK++ G
Sbjct: 723 KIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG------ 776
Query: 481 HVLSYADQQERE----AKLQV---HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
LS + R+ +K ++ HSE+LA+AF LI+T PG+ I + KN+ +C +CH+
Sbjct: 777 --LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTV 834
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGD--YW 566
KF SKVV R I VRDT +FHHF+DG CSCGD YW
Sbjct: 835 KFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 221/413 (53%), Gaps = 7/413 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + E VH+++ + + + + N +L+ + + G L EA +F +M +D+ +W
Sbjct: 104 CEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ GY++ + A+ L+ +ML +G++P+ +T VL+ G G D GR+VH +
Sbjct: 164 NVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCG-GLPDLARGREVHLHVI 222
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+YG++ +V V ++L+ MY + + A +F + ++ +SWNA+I+G+ + LR
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 182 TFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M+RE F +P + +SV +A + G G+ VH +VIK+G V N+L+ M+
Sbjct: 283 LFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMH 341
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G ++AE VF+++ +D+VSW +M++G ++GL + V + M G+ P+++T
Sbjct: 342 SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIA 401
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+ GLLD+G + G+ + +D+ + +D+AL+ +P +
Sbjct: 402 SVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
+ +LG +++ E + + I L P+ + L ++ ++ R+
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNS----VTLVSVLSACARI 510
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/553 (40%), Positives = 331/553 (59%), Gaps = 34/553 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H +L ++ + N ++ Y KC L EA+++ DE+P +D+V+W +++S Y+QN +
Sbjct: 142 IHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGR 201
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A+ L +M L LKPN T++S+L A +D+ YV
Sbjct: 202 FNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVL-----------------YVKE 244
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+F L K+ +SWN +IA + S ++A+ +S+M G EP
Sbjct: 245 -----------------MFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEP 287
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S SV A +L G+ VH + + N L+DMYAK G + DA VF
Sbjct: 288 DVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVF 347
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N++ RDVVSW S+++ + G G+ V F +M +G+ P+ + F+ VL ACSHAGLLD
Sbjct: 348 NQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLD 407
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+G+ YF LM + G+ P+ H+ VDLLGRAG +D A FIR+MP+EP VWG LL AC
Sbjct: 408 DGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSAC 467
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
R++ N+ +G AA+++ L+P SG ++LL+NIYA AGR D A R +M+ G+KK P
Sbjct: 468 RVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPG 527
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
S VE + VH F+A D +HPQ I+++ + K+K++GY+P++ L +++++E
Sbjct: 528 ISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEY 587
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L VHSEKLA+AFA+I+T PG+ I + KN+RVCGDCH A K SK+ EREII+RDT+RFH
Sbjct: 588 HLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFH 647
Query: 554 HFRDGFCSCGDYW 566
HF++G CSCGDYW
Sbjct: 648 HFQEGCCSCGDYW 660
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 177/401 (44%), Gaps = 44/401 (10%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++ YA CG AR +FDE+ K++V + +I Y N ++A++++ M G P+
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119
Query: 93 QFTLSSVLKASGAGATDDKF--GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+T VLKAS + D G Q+H LK G D N+YVG+ L+ MY + + +A
Sbjct: 120 MYTYPCVLKAS---SRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQ 176
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+ + ++ VSWN++++ +A+ AL EM +P + +S+ A+ +T S
Sbjct: 177 VLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTS 236
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
N L Y K ++F +L K+ V+SWN M+
Sbjct: 237 ----------------------DNVL---YVK--------EMFLKLTKKSVISWNVMIAM 263
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ + K V + +M NG+ P+ V+ + VL A L G+ ++ + P
Sbjct: 264 YVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPN 323
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL---GACRMHKNVELGAYAAE 387
+D+ + G L A +M + W +++ G C ++ + +A
Sbjct: 324 LLLENALIDMYAKCGCLRDARAVFNQMQFRDVVS-WTSIISAYGKCGQGRDA-VAVFAEM 381
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
R L+P DS + + + AG L+D +M E G+
Sbjct: 382 RNSGLNP-DSIAFVSVLAACSHAGLLDDGRYYFNLMAECGI 421
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%)
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN VG L+ +YA + A +F + KN V +N +I + + AL + M
Sbjct: 52 WNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTM 111
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+GF P ++Y V A + + SL G +H V+K G L +VGN L+ MY K S+
Sbjct: 112 YTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSL 171
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
++A++V + + RDVVSWNSM++ AQ+G + +M + PN T +L A
Sbjct: 172 KEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAV 231
Query: 307 SHA 309
++
Sbjct: 232 TNT 234
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L R VH ++ ++N +++ YAKCGCL +AR +F++M +D+V+WT++
Sbjct: 302 LSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSI 361
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKY 123
IS Y + Q +A+ +F++M GL P+ SVL A S AG DD GR +
Sbjct: 362 ISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDD--GRYYFNLMAEC 419
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G + + ++D+ R ++D+A+ F+ +E W L++ S +
Sbjct: 420 GITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILA 479
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
++L P H Y + + + + + G+W I+S
Sbjct: 480 ADKLLM--LNPEHSGYYVLLSNIYA----KAGRWADVAAIRS 515
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 343/554 (61%), Gaps = 2/554 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + + +D+ ++ ++L+ Y KC D+A K+FD++P K++V+WTA+I+GY +
Sbjct: 136 IHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGH 195
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
AI F ++L +GLKP+ F+L VL A+ A D G + + G NV+V +
Sbjct: 196 FREAIGAFKKLLEMGLKPDSFSLVKVL-AACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SLLDMY + ++ A +F+A+ K+ VSW+ +I G+A ++AL F +M E +P
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++ V +A A+ G+L+ G W + + ++ +G L+DMY+K GS+ A ++F
Sbjct: 315 DCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIF 374
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ ++D V WN+M+ G + +G KA F + ++GI P++ TF+ +L C+H G ++
Sbjct: 375 TAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVN 434
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ +F MK+ + P HY VDLLGRAGLL+ A + I MP++P A VWGALLG
Sbjct: 435 EGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++HK+ L +++ EL+P +SG ++ L+NIY+ R +A + R MKE ++K
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIR 554
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
ACSW+E VH F+ D +H I+ K E+ ++K +G+VP + VL +++E+E
Sbjct: 555 ACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKE 614
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L HSEKLA+AF LI++PP I + KN+RVCGDCH A K SK+ +REII+RDTNRF
Sbjct: 615 HFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRF 674
Query: 553 HHFRDGFCSCGDYW 566
H F DG CSC DYW
Sbjct: 675 HTFIDGSCSCRDYW 688
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 186/372 (50%), Gaps = 2/372 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L + + +HA +L D + N IL G + ++ +F ++ ++ W +
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G D ++AI L+ M G PN FT+ VLKA A D + G ++H+ +K G
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKAC-ARKLDVRLGLKIHSLLVKAG 144
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
YD +V+V +SLL +Y + D DDA +F + KN VSW A+I G+ +A+ F
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
++L G +P FS V A A G G+W+ ++ SG FV +L+DMY K G
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++E A +F+ + ++D+VSW++M+ G A +GL + + F +M + P+ T + VL+
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC+ G LD G +LM ++ +D+ + G + +A + M
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKDRV 383
Query: 365 VWGALLGACRMH 376
VW A++ M+
Sbjct: 384 VWNAMMVGLSMN 395
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 7/277 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +I S ++ + ++L+ Y KCG L+ A +F MP KD+V+W
Sbjct: 225 CARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSW 284
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
+ +I GY+ N P+ A+ LF QM LKP+ +T+ VL A GA D G +
Sbjct: 285 STMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD--LGIWASSLM 342
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + N +G++L+DMY++ + AW +FTA++ K+ V WNA++ G + +
Sbjct: 343 DRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV--IKSGGQLVAFVGNTLVD 238
FS + + G P ++ + G + +G+ ++ + S + G +VD
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG-CMVD 461
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+ ++G + +A ++ N + +K + V W ++L GC H
Sbjct: 462 LLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/556 (41%), Positives = 333/556 (59%), Gaps = 4/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + D+ + + + Y K D+ARKLFDE+P +++ TW A IS + +
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P AI F + R+ PN T + L A + G Q+H L+ G+D +V V +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNAC-SDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D Y + Q+ + +FT + +KN VSW +L+A + + E EKA + ++ E
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ F SSV +A A LE G+ +HAH +K+ + FVG+ LVDMY K G IED+E+ F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP--NQVTFLCVLTACSHAGL 311
+ + ++++V+ NS++ G A G + FE+M G P N +TF+ +L+ACS AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ G F M+ +G+EP HY VD+LGRAG+++RA +FI++MPI+PT +VWGAL
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
ACRMH +LG AAE +F+LDP DSG H+LL+N +A+AGR +A R+ +K G+KK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
SW+ KN VH F A D +H I ++ +++ GY PD L +++E
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ A++ HSEKLALAF L+S P I I KN+R+CGDCHS FKF S V+REIIVRD N
Sbjct: 609 KAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNN 668
Query: 551 RFHHFRDGFCSCGDYW 566
RFH F+DG CSC DYW
Sbjct: 669 RFHRFKDGICSCKDYW 684
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 182/394 (46%), Gaps = 8/394 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIA-MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++ R+VHA I+ + + N ++N Y+K + AR + P +++V+WT+LIS
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G +QN A++ F +M R G+ PN FT KA A G+Q+HA +K G
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAV-ASLRLPVTGKQIHALAVKCGRI 140
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V+VG S DMY + DDA LF + +N +WNA I+ +A+ F E
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R P ++ + A + L G +H V++SG V N L+D Y K I
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+E +F + ++ VSW S++ Q H KA+V + + ++ + + VL+A
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL-RSRKDIVETSDFMISSVLSA 319
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ L+ G+ A K VE VD+ G+ G ++ + + EMP E
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVT 378
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+L+G V++ E E+ P GP
Sbjct: 379 RNSLIGGYAHQGQVDMALALFE---EMAPRGCGP 409
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 149/278 (53%), Gaps = 5/278 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L +H +L S F D+++ N +++ Y KC + + +F EM K+ V+W
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 278
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+L++ Y QN + E A +L+ + + ++ + F +SSVL A AG + GR +HA +
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC-AGMAGLELGRSIHAHAV 337
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + ++VGS+L+DMY + ++D+ F + KN V+ N+LI G+A + + + AL
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 397
Query: 182 TFSEMLREGFEPT--HFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVD 238
F EM G PT + ++ S+ +A + G++E G + + + G + A + +VD
Sbjct: 398 LFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVD 457
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
M ++G +E A + ++ + +S W ++ C HG
Sbjct: 458 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 2/275 (0%)
Query: 99 VLKASGAGATDDKFGRQVHAFCLK-YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALES 157
+L + A+ + GR VHA +K ++ + L++MY++ D + A + +
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 158 KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV 217
+N VSW +LI+G A+ AL F EM REG P F++ F A+AS GK +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
HA +K G L FVG + DMY K+ +DA K+F+ + +R++ +WN+ ++ G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
+ + F + R PN +TF L ACS L+ G L+ + G + + +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+D G+ + + EM + A W +L+ A
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +HAH + + + I + + +++ Y KCGC++++ + FDEMP K++VT
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 379
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL--KPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+LI GY+ Q + A+ LF +M G PN T S+L A S AGA ++ + +
Sbjct: 380 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM-KIFDS 438
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGE 177
YG + S ++DM R ++ A+ + + +S W AL +A + G+
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL--QNACRMHGK 496
Query: 178 KALRTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
L + +P H S+ F A G+W A+ ++
Sbjct: 497 PQLGLLAAENLFKLDPKDSGNHVLLSNTFAA--------AGRWAEANTVR 538
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 350/567 (61%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VH+ + + F + NT+L+ Y+KCG LD A+ +F EM + +V++
Sbjct: 155 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 214
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY++ A+ LF +M G+ P+ +T+++VL D+ G++VH +
Sbjct: 215 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE-GKRVHEWIK 273
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ ++++V ++L+DMYA+ M +A +F+ + K+ +SWN +I G+++ +AL
Sbjct: 274 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 333
Query: 182 TFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ +L E F P + + V A AS + ++G+ +H +++++G V N+LVDMY
Sbjct: 334 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 393
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G++ A +F+ + +D+VSW M+ G HG GK + F +M + GI ++++F+
Sbjct: 394 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV 453
Query: 301 CVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSH+GL+DEG +F +M+ +EP HY VD+L R G L +A +FI MPI
Sbjct: 454 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 513
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
P A +WGALL CR+H +V+L AE++FEL+P ++G ++L+ANIYA A + R
Sbjct: 514 PPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRL 573
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK + + G++K P CSW+E K V++FVA D ++P+ I R++ ++ + GY P +
Sbjct: 574 RKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLT 633
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L A++ E+E L HSEKLA+A +IS+ G I + KN+RVCGDCH KF SK+
Sbjct: 634 KYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKL 693
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFH F+DG CSC +W
Sbjct: 694 TRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 199/378 (52%), Gaps = 9/378 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L+ + +H IL S F ++ N+++ Y K +D ARK+FDEM +D+++W
Sbjct: 55 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 114
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQVHAF 119
++I+GY N E + +F QML G++ + T+ SV AG D + GR VH+
Sbjct: 115 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF----AGCADSRLISLGRAVHSI 170
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K + ++LLDMY++ +D A +F + ++ VS+ ++IAG+AR+ +A
Sbjct: 171 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 230
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F EM EG P ++ ++V A L++GK VH + ++ FV N L+DM
Sbjct: 231 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 290
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVT 298
YAK GS+++AE VF+ + +D++SWN+++ G +++ + F +L +P++ T
Sbjct: 291 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 350
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
CVL AC+ D+G+ + ++G + + VD+ + G L A ++
Sbjct: 351 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 410
Query: 359 IEPTAAVWGALLGACRMH 376
+ + W ++ MH
Sbjct: 411 SKDLVS-WTVMIAGYGMH 427
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 165/323 (51%), Gaps = 2/323 (0%)
Query: 50 FDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD 109
FDE+ ++ + W L++ +++ +I LF +M+ G++ + +T S V K S +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK-SFSSLRS 59
Query: 110 DKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG 169
G Q+H F LK G+ VG+SL+ Y + ++D A +F + ++ +SWN++I G
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+ EK L F +ML G E + SVF A + + G+ VH+ +K+
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
NTL+DMY+K G ++ A+ VF + R VVS+ SM+ G A+ GL V+ FE+M
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
GI+P+ T VL C+ LLDEG+ +K++ + + +D+ + G +
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 350 ALKFIREMPIEPTAAVWGALLGA 372
A EM ++ + W ++G
Sbjct: 300 AELVFSEMRVKDIIS-WNTIIGG 321
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 9/269 (3%)
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F ++ + + WN L+ A+ + ++ F +M+ G E +++S V + +S S+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
G+ +H ++KSG VGN+LV Y K+ ++ A KVF+ + +RDV+SWNS++ G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
+GL + + F +ML +GI + T + V C+ + L+ G+ ++ K E+
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
T +D+ + G LD A REM + + G R L A + E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG----LAGEAVKLFEE 236
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARAR 420
++ P ++Y LN AR R
Sbjct: 237 MEEEGISP-----DVYTVTAVLNCCARYR 260
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 336/553 (60%), Gaps = 2/553 (0%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA I + D + Y +D A +F+++P W +I G++ + +
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
+++ L+S+M+ GLKP++F LK S AG +D + G+ +H + G +++V ++
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALK-SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAA 858
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
L+DMYA+ ++ A +F + ++ VSW ++I+G+A + L F M G P
Sbjct: 859 LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPN 918
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN 254
S SV A + G+L +G+W H++VI++G + V ++DMY+K GS++ A +F+
Sbjct: 919 RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD 978
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+D+V W++M+ HG G+ + F++M++ G+ P+ VTF CVL+ACSH+GLL+E
Sbjct: 979 ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 315 GQGYFALMKKHGVEPEE-AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ YF LM + V + ++Y VDLLGRAG L A+ I MP+EP A++WG+LLGAC
Sbjct: 1039 GKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
R+H N++L A+ +F LDP +G H+LL+NIYA+ R N+ + RKMM G K
Sbjct: 1099 RIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQG 1158
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
S VE N VH F D +HPQ ++ K E++ +K +GYVP + VL +++ +EA
Sbjct: 1159 FSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEA 1218
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSE+LA+AF LI+T PG+T+ I KN+R+CGDCH+A K SK+V R I+VRD +RFH
Sbjct: 1219 ALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFH 1278
Query: 554 HFRDGFCSCGDYW 566
F DG CSCGDYW
Sbjct: 1279 RFEDGVCSCGDYW 1291
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 286/484 (59%), Gaps = 3/484 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +K VH ++ F D+ + N++LN YAK GC A LF +MP KD+++W
Sbjct: 216 CAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 275
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+ Y+ N+ A+ LF +M+ +PN T+ S L+A ++ G+++H +
Sbjct: 276 STMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEE-GKKIHKIAV 334
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ + V ++L+DMY + D+A LF L K+ VSW AL++G+A+ K++
Sbjct: 335 WKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMG 394
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML +G +P + + A + G +Q +H +V++SG FVG +L+++Y+
Sbjct: 395 VFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYS 454
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFL 300
K GS+ DA K+F ++ RDVV W+SM+ HG G + F++M++N + PN VTFL
Sbjct: 455 KCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFL 514
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L+ACSHAGL++EG F ++ + + P+ H+ VDLLGR G L +A+ I MPI
Sbjct: 515 SILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPI 574
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
VWGALLGACR+H N+E+G AA+ +F LDP +G +ILL+NIYA G+ ++ A
Sbjct: 575 PAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAEL 634
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R +KE G+KK S VE + VH F+A+D HP I++ R++ ++ + Y+PD
Sbjct: 635 RTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDL 694
Query: 480 SHVL 483
+L
Sbjct: 695 DFLL 698
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 204/381 (53%), Gaps = 12/381 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKND-----IAMQNTILNAYAKCGCLDEARKLFDEMPVK 56
C L+ L+ +++H G A KND + + + ++ Y+KCG + EA K+F+E
Sbjct: 113 CAGLRMLELGKVIH----GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRP 168
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQ 115
D V WT++++GY QN+ PE A+ LFSQM+ + + + TL SV+ A A + K G
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSAC-AQLLNVKAGSC 227
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
VH ++ +D ++ + +SLL++YA+ A LF+ + K+ +SW+ +IA +A
Sbjct: 228 VHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA 287
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+AL F EM+ + FEP + S A A + +LE+GK +H + G +L V
Sbjct: 288 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTA 347
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+DMY K ++A +F RL K+DVVSW ++L+G AQ+G+ ++ F ML +GI P+
Sbjct: 348 LIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 407
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
V + +L A S G+ + + + G + ++L + G L A+K +
Sbjct: 408 AVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFK 467
Query: 356 EMPIEPTAAVWGALLGACRMH 376
M + +W +++ A +H
Sbjct: 468 GMIVRDV-VIWSSMIAAYGIH 487
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 157/276 (56%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ +++H H++ ND+ + +++ YAKCG ++ AR +FD+M V+D+V+W
Sbjct: 828 CAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSW 887
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGY+ N + F M G+ PN+ ++ SVL A G K G H++ +
Sbjct: 888 TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRK-GEWFHSYVI 946
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+++++ V ++++DMY++ +D A LF K+ V W+A+IA + G KA+
Sbjct: 947 QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 1006
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F +M++ G P+H +++ V +A + +G LE+GK ++ ++ + + N +VD+
Sbjct: 1007 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDL 1065
Query: 240 YAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
++G + +A + + N ++ D W S+L C H
Sbjct: 1066 LGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIH 1101
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 186/364 (51%), Gaps = 13/364 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ + + +D + + YAKC L ARK+FDE P ++ W + + Y + Q
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 74 PENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK---YGYDWNV 129
E + LF M+ G P+ FT+ LKA AG + G+ +H F K G D +
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKAC-AGLRMLELGKVIHGFAKKNDEIGSD--M 139
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VGS+L+++Y++ QM +A +F + + V W +++ G+ + ++ E+AL FS+M+
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 190 G---FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+P + SV +A A +++ G VH VI+ + N+L+++YAK+G
Sbjct: 200 DCVVLDPV--TLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCE 257
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ A +F+++ ++DV+SW++M+ A + + F +M+ PN VT + L AC
Sbjct: 258 KIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQAC 317
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ + L+EG+ + G E + + +D+ + D A+ + +P + + W
Sbjct: 318 AVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVS-W 376
Query: 367 GALL 370
ALL
Sbjct: 377 VALL 380
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 1/263 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
++ HA YG ++ + + MY F+++D A +F + + WN +I G A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+L +S+M+ +G +P F++ + A L++GK +H H++ G FV
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
LVDMYAK G IE A VF+++ RD+VSW SM++G A +G T+ +F+ M +G+
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
PN+V+ L VL AC + G L +G+ + + + + G E + +D+ + G LD A
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
E + W A++ + +H
Sbjct: 977 FDETAGKDLVC-WSAMIASYGIH 998
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 9/264 (3%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+H+ K G + + + L +YA+ + A +F N WN+ + + R+
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 175 EGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS---GGQLVA 230
+ E+ LR F M+ G P +F+ A A LE GK +H K+ G +
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM-- 139
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LR 289
FVG+ LV++Y+K G + +A KVF + D V W SM+TG Q+ + + F +M +
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+ + + VT + V++AC+ + G L+ + + + + ++L + G
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 350 ALKFIREMPIEPTAAVWGALLGAC 373
A +MP E W ++ AC
Sbjct: 260 AANLFSKMP-EKDVISWSTMI-AC 281
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 350/562 (62%), Gaps = 6/562 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++H H+L +D+ + N ++N Y+K G L +A+ +FD+M V+D+V+W
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSW 291
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QN+ P A+ F M G++P+ T+ S L + + +D + R + F +
Sbjct: 292 NSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS-LTSIFSQLSDQRISRSILGFVI 350
Query: 122 KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ + D +V +G++L++MYA+ M+ A +F L K+ +SWN L+ G+ + +A+
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 181 RTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
++ M+ E + P ++ S+ A + G+L+QG +HA +IK+ L FV L+D
Sbjct: 411 DAYN-MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLID 469
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K G +EDA +F + + V WN+++ HG G+ ++ F+ ML + + +T
Sbjct: 470 LYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHIT 529
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ +L+ACSH+GL+DEGQ F +M+K +G++P HY VDLLGRAG L++A + +R M
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM 589
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI+P A++WGALL AC+++ N ELG A++R+ E+D + G ++LL+NIYA+ +
Sbjct: 590 PIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVI 649
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
+ R + ++ G++K P S V + +F + HP+ I+K+ + +S K+K +GYVP
Sbjct: 650 KVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVP 709
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D S V ++ E+E L HSE+LA+AF +ISTPP S I I KN+RVCGDCH+A K+ S
Sbjct: 710 DYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYIS 769
Query: 538 KVVEREIIVRDTNRFHHFRDGF 559
++ EREI+VRD+NRFHHF+DG
Sbjct: 770 RISEREIVVRDSNRFHHFKDGI 791
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 163/311 (52%), Gaps = 11/311 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ K+ +HA +L +I + ++N Y G + +R FD + K++ +W
Sbjct: 32 CVNVNATKK---LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSW 88
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG----LKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++IS Y + + A+ +Q+ + L+P+ +T +LKA D G++VH
Sbjct: 89 NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC-VSLVD---GKKVH 144
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
K G++ +V+V +SL+ +Y+R+ +D A +F + K+ SWNA+I+G +
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL + M EG + + +S+ A + + G +H HV+K G FV N L+
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+MY+K G ++DA+ VF+++ RD+VSWNS++ Q+ +R+F+ M GI P+ +
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLL 324
Query: 298 TFLCVLTACSH 308
T + + + S
Sbjct: 325 TVVSLTSIFSQ 335
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 8/263 (3%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+++HA L +G N+ + + L+++Y + + F + KN SWN++I+ + R
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 174 SEGEKALRTFSEMLREG----FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+ +A+ +++ P +++ + A S L GK VH V K G +
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDD 155
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV +LV +Y++ G ++ A KVF + +DV SWN+M++G Q+G + +M
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ + +T +L C+ + + G + KHG++ + +++ + G L
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275
Query: 350 ALKFIREMPIEPTAAVWGALLGA 372
A +M + + W +++ A
Sbjct: 276 AQMVFDQMEVRDLVS-WNSIIAA 297
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 202 FTAL-ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
F AL S ++ K +HA ++ G + L+++Y G I + F+ + K++
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84
Query: 261 VVSWNSMLTGCAQHGL---GKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQ 316
+ SWNS+++ + G V M G + P+ TF +L AC L +G+
Sbjct: 85 IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGK 141
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACR 374
+ K G E + + V L R G+LD A K +MP++ + W A++ G C+
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS-WNAMISGFCQ 199
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/556 (41%), Positives = 333/556 (59%), Gaps = 4/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + D+ + + + Y K D+ARKLFDE+P +++ TW A IS + +
Sbjct: 80 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 139
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P AI F + R+ PN T + L A + G Q+H L+ G+D +V V +
Sbjct: 140 PREAIEAFIEFRRIDGHPNSITFCAFLNAC-SDWLHLNLGMQLHGLVLRSGFDTDVSVCN 198
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D Y + Q+ + +FT + +KN VSW +L+A + + E EKA + ++ E
Sbjct: 199 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 258
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ F SSV +A A LE G+ +HAH +K+ + FVG+ LVDMY K G IED+E+ F
Sbjct: 259 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 318
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP--NQVTFLCVLTACSHAGL 311
+ + ++++V+ NS++ G A G + FE+M G P N +TF+ +L+ACS AG
Sbjct: 319 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 378
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ G F M+ +G+EP HY VD+LGRAG+++RA +FI++MPI+PT +VWGAL
Sbjct: 379 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 438
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
ACRMH +LG AAE +F+LDP DSG H+LL+N +A+AGR +A R+ +K G+KK
Sbjct: 439 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 498
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
SW+ KN VH F A D +H I ++ +++ GY PD L +++E
Sbjct: 499 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 558
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ A++ HSEKLALAF L+S P I I KN+R+CGDCHS FKF S V+REIIVRD N
Sbjct: 559 KAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNN 618
Query: 551 RFHHFRDGFCSCGDYW 566
RFH F+DG CSC DYW
Sbjct: 619 RFHRFKDGICSCKDYW 634
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 167/364 (45%), Gaps = 7/364 (1%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+K + AR + P +++V+WT+LISG +QN A++ F +M R G+ PN FT
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
KA A G+Q+HA +K G +V+VG S DMY + DDA LF +
Sbjct: 62 PCAFKAV-ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+N +WNA I+ +A+ F E R P ++ + A + L G
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-HG 275
+H V++SG V N L+D Y K I +E +F + ++ VSW S++ Q H
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
KA+V + + ++ + + VL+AC+ L+ G+ A K VE
Sbjct: 241 DEKASVLYL-RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VD+ G+ G ++ + + EMP E +L+G V++ E E+ P
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPR 355
Query: 396 DSGP 399
GP
Sbjct: 356 GCGP 359
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 149/282 (52%), Gaps = 13/282 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L +H +L S F D+++ N +++ Y KC + + +F EM K+ V+W
Sbjct: 169 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 228
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+L++ Y QN + E A +L+ + + ++ + F +SSVL A AG + GR +HA +
Sbjct: 229 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC-AGMAGLELGRSIHAHAV 287
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + ++VGS+L+DMY + ++D+ F + KN V+ N+LI G+A + + + AL
Sbjct: 288 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 347
Query: 182 TFSEMLREGFEPT--HFSYSSVFTALASTGSLEQGKWV-----HAHVIKSGGQLVAFVGN 234
F EM G PT + ++ S+ +A + G++E G + + I+ G + +
Sbjct: 348 LFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYS---- 403
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
+VDM ++G +E A + ++ + +S W ++ C HG
Sbjct: 404 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 445
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY++ D + A + ++N VSW +LI+G A+ AL F EM REG P F+
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ F A+AS GK +HA +K G L FVG + DMY K+ +DA K+F+ +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R++ +WN+ ++ G + + F + R PN +TF L ACS L+ G
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
L+ + G + + + +D G+ + + EM + A W +L+ A
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 234
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +HAH + + + I + + +++ Y KCGC++++ + FDEMP K++VT
Sbjct: 270 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 329
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL--KPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+LI GY+ Q + A+ LF +M G PN T S+L A S AGA ++ + +
Sbjct: 330 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM-KIFDS 388
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGE 177
YG + S ++DM R ++ A+ + + +S W AL +A + G+
Sbjct: 389 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL--QNACRMHGK 446
Query: 178 KALRTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
L + +P H S+ F A G+W A+ ++
Sbjct: 447 PQLGLLAAENLFKLDPKDSGNHVLLSNTFAA--------AGRWAEANTVR 488
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 339/568 (59%), Gaps = 8/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMV 59
C L + +H H+ + + +Q ++++ Y KC +D ARKLFDE P K V
Sbjct: 20 CAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTV 79
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ +L+SGY+ N + ++ ++LF +M LG++ N T+ +++ G + G VH F
Sbjct: 80 CYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGI-PGNLGLGMCVHGF 138
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
C+K+G D + VG+ LL MY + ++D LF + K ++WNA+I G+A+
Sbjct: 139 CVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNV 198
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L + EM +GF P + V ++ A G+L GK V + G F+ N LV+M
Sbjct: 199 LELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNM 258
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ G+++ A +F+ + + VVSW +++ G HG G+ V F++M+R GI P+ F
Sbjct: 259 YARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAF 318
Query: 300 LCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACSHAGL ++G YF +M +K+G+ P HY VDLLGRAG L+ A + I M
Sbjct: 319 VSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQ 378
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ A+WGALLGAC++H+NVEL A E++ EL+P ++G ++LL+N+Y AG L R
Sbjct: 379 VRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILR 438
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R +M++ +KK+P CS+VE K VH+F A D HPQ I+KK E+ +K +
Sbjct: 439 VRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKK 498
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ H ++E + VHSEKLA+AFAL++T + I I KN+R+CGDCH K SK
Sbjct: 499 NDH----ERREEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSK 554
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V+R+ +VRD RFHHF++GFCSC +YW
Sbjct: 555 IVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 4/300 (1%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
MLR G PN FT +K+ A + G+Q+H K G +V +SL+ MY +
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPIT-GKQLHCHVFKTGCLLEPFVQTSLISMYGKCS 59
Query: 144 QMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
+D+A LF K V +N+L++G+A S + + F EM G E + +
Sbjct: 60 LIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGL 119
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
G+L G VH +K G + + VGN L+ MY KSG I+ K+F+ + ++ +
Sbjct: 120 VQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
++WN+M+ G AQ+GL + +++M G P+ +T + VL++C+H G L G+
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERK 239
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
M+ G V++ R G L +A MP++ + W A++G MH E+
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVS-WTAIIGGYGMHGQGEV 298
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 335/559 (59%), Gaps = 7/559 (1%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R VH + + + +++ Y+KCG +D A+ LFD M D+V + ALISGYS N
Sbjct: 232 RCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVN 291
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
E+++ LF ++ G +PN TL +V+ + R +HAF +K D + V
Sbjct: 292 GMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFG-HELLARCLHAFVVKARLDADALV 350
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++L +Y R + M+ A +F A+ K SWNA+I+G+A+ E A+ F M
Sbjct: 351 STALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNV 410
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P + SS +A A G+L GKWVH + K +L +V L+DMYAK GSI +A
Sbjct: 411 QPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARS 470
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+R+ ++VVSWN+M++G HG G ++ ++ ML I P TFL V+ ACSH GL
Sbjct: 471 IFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGL 530
Query: 312 LDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWG 367
+DEGQ F +M ++ + P H VDLLGRAG L+ AL+ I E P I P VWG
Sbjct: 531 VDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGP--GVWG 588
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
ALLGAC +HKN +L A++++FELD ++G ++LL+N+Y S ++AA R+ K
Sbjct: 589 ALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRK 648
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD 487
+ K P C+ +E + H+F+A D HPQ I+ ++ K+ + GY P + L +
Sbjct: 649 LVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVE 708
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++E+E ++VHSEKLA+AF L+ST PG+ I I KN+RVC DCH+A KF SKV +R I+VR
Sbjct: 709 EEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVR 768
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D +RFHHFRDG CSCGDYW
Sbjct: 769 DASRFHHFRDGVCSCGDYW 787
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 184/367 (50%), Gaps = 7/367 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
AR +H + + + D + + + Y K D+ARK+FD +P D + W L++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192
Query: 71 NDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
++ A+ F +M+ G ++P+ TL+S L+A+ A A+ GR VH + +K G +
Sbjct: 193 SE----ALEAFVRMVDAGRVRPDSTTLASSLRAA-AEASHMAMGRCVHGYGVKCGLAEHE 247
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+V + L+ +Y++ MD A FLF +++ + V++NALI+G++ E ++ F E+
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G+ P + +V + G + +HA V+K+ A V L +Y + +E A
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+F+ +L++ + SWN+M++G AQ+GL + V F+ M + PN +T L+AC+H
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
G L G+ ++ K +E +D+ + G + A M W A+
Sbjct: 428 GALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMD-NKNVVSWNAM 486
Query: 370 LGACRMH 376
+ +H
Sbjct: 487 ISGYGLH 493
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 133/286 (46%), Gaps = 6/286 (2%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D R +H + GY + +V S+L +Y + + DDA +F + S + + WN L+A
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188
Query: 169 GHARKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
G G +AL F M+ G P + +S A A + G+ VH + +K G
Sbjct: 189 G----LPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLA 244
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
V L+ +Y+K G ++ A+ +F+R+ D+V++N++++G + +G+ +++V F+++
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKEL 304
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+G PN T + V+ S G + A + K ++ + L R +
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
+ A M +E T W A++ + E+ + + EL+
Sbjct: 365 ESARSIFDAM-LEKTMESWNAMISGYAQNGLTEMAVALFQLMQELN 409
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/561 (40%), Positives = 345/561 (61%), Gaps = 14/561 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K+ EAR + + G D+ N +++ YA+ G + EAR+LFD PV+D+ TWTA++S
Sbjct: 208 KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY+QN E A +F M + N + ++++ A D+ + +
Sbjct: 264 GYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN ++L YA+ +++A +F + K+ VSW A++A +++ E+ L+ F EM
Sbjct: 320 WN-----TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R G +++ V + A +LE G +H +I++G + FVGN L+ MY K G++
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 434
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
EDA F + +RDVVSWN+M+ G A+HG GK + F+ M P+ +T + VL AC
Sbjct: 435 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+++G YF M GV + HY +DLLGRAG L A +++MP EP + +
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGA R+H+N ELG AAE+IFEL+P ++G ++LL+NIYAS+G+ DA + R MM+E
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK P SW+E +N VH F A D HP++ I+ ++ ++K+ GYV + VL
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E L+ HSEKLA+A+ +++ PPG I + KN+RVCGDCH+AFK+ S + R I+
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 734
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD+NRFHHFR G CSCGDYW
Sbjct: 735 LRDSNRFHHFRGGSCSCGDYW 755
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 52/326 (15%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+A A L +AR LFDEMPV+D VT+ +IS ++ + A F L
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD------LA 157
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCL-KYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P + +S +G A + GR A L +W+ ++L+ Y ++ +M +A
Sbjct: 158 PEKDAVS----WNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEAR 213
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH--FSYSSVFTALAS 207
LF + ++ VSWN +++G+AR+ + +A R F P F++++V + A
Sbjct: 214 ELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA------APVRDVFTWTAVVSGYAQ 267
Query: 208 TGSLEQGKWV-----HAHVIKSGGQLVAFVG----------------------NTLVDMY 240
G LE+ + V + + + A++ NT++ Y
Sbjct: 268 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGY 327
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A++G +E+A+ VF+ + ++D VSW +ML +Q G + T++ F +M R G N+ F
Sbjct: 328 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFA 387
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHG 326
CVL+ C+ L+ G M+ HG
Sbjct: 388 CVLSTCADIAALECG------MQLHG 407
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 161/350 (46%), Gaps = 26/350 (7%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
+ ++ N + A+ + G + +A +LF MP + T+ A+++GYS N + A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+ R P+ ++ +++L A ++ ++ +NV + S +A
Sbjct: 94 AIPR----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANH 144
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+ A F K+ VSWN ++A + R E+A F+ E S++++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----EWDAISWNALM 200
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ G + + + + + G +V++ N +V YA+ G + +A ++F+ RDV
Sbjct: 201 SGYVQWGKMSEARELFDRM--PGRDVVSW--NIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
+W ++++G AQ+G+ + R F+ M N V++ ++ A ++DE + F +M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
V A + T + +AG+L+ A MP + A W A+L A
Sbjct: 313 PCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ +H ++ + + + N +L Y KCG +++AR F+EM +D+V+W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ + A+ +F M KP+ TL VL A +K ++
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
+G + ++D+ R ++ +A L + + W AL+ G +R +
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL-GASRIHRNPELG 571
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
R+ +E + E EP + + + + ++ GKW A ++
Sbjct: 572 RSAAEKIFE-LEPENAGMYVLLSNIYAS----SGKWRDARKMR 609
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 345/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ + VH +++ S ++ D N ++N YAKCG L ++++F M KD V+W
Sbjct: 385 CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 444
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+ Y QN + A+ LF +M++ +KP+ T +L S D G+++H
Sbjct: 445 NSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMS-TQLGDLXLGKELHCDLA 502
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G++ N+ V ++L+DMYA+ +M D+ +F +++++ ++WN +IA + LR
Sbjct: 503 KMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLR 562
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
S M EG P + S+ + + QGK +H + K G + VGN L++MY+
Sbjct: 563 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 622
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ ++ +VF + +DVV+W ++++ C +G GK VR F +M GI P+ V F+
Sbjct: 623 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 682
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ ACSH+GL++EG YF MKK + +EP HY VDLL R+ LLD+A FI MP++
Sbjct: 683 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 742
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +++WGALL ACRM + E+ +ERI EL+P D+G ++L++N+YA+ G+ + R
Sbjct: 743 PDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIR 802
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K +K G+KK+P CSW+E +N V++F Q ++K ++ + + GY+ +
Sbjct: 803 KSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQ 862
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D+ E+ L HSE+LA+AF L++T PG+ + + KN+RVC DCH+ K+ SK+
Sbjct: 863 FVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIX 922
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+RE++VRD NRFH F+DG CSCGDYW
Sbjct: 923 QRELLVRDANRFHVFKDGACSCGDYW 948
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 213/389 (54%), Gaps = 6/389 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A+ +H +L F +D+ + N +++ Y + LD+ARK+F+EMP++D+V+W
Sbjct: 184 CAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 243
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
+LISGY+ N A+ ++ + LG+ P+ +T+SSVL+A G G+ ++ G +H
Sbjct: 244 NSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE--GDIIHGLI 301
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G +V V + LL MY +F+ + D +F + ++ VSWN +I G+++ E+++
Sbjct: 302 EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESI 361
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F EM+ + F+P + +S+ A G LE GK+VH ++I SG + N L++MY
Sbjct: 362 KLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 420
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G++ +++VF+ + +D VSWNSM+ Q+G ++ F KM++ + P+ VT++
Sbjct: 421 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYV 479
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ + G L G+ + K G T VD+ + G + +LK M
Sbjct: 480 MLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR 539
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERI 389
W ++ +C ++ LG R+
Sbjct: 540 DIIT-WNTIIASCVHSEDCNLGLRMISRM 567
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 188/365 (51%), Gaps = 13/365 (3%)
Query: 54 PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 113
P ++ W ++I + N A+ L+S+ R+ L+P+ +T SV+ A AG D +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC-AGLLDFEMA 193
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+ +H L G+ ++Y+G++L+DMY RF+ +D A +F + ++ VSWN+LI+G+
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL + G P ++ SSV A GS+E+G +H + K G + V
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N L+ MY K + D ++F++++ RD VSWN+M+ G +Q GL + +++ F +M+ N
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFK 372
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ +T +L AC H G L+ G+ M G E + +++ + G L + +
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAY-AAERIFELDPHDSGP----HILLANIYA 408
M + + + W +++ ++ G++ A ++F++ D P +++L ++
Sbjct: 433 FSGMKCKDSVS-WNSMINV-----YIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMST 486
Query: 409 SAGRL 413
G L
Sbjct: 487 QLGDL 491
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 172/395 (43%), Gaps = 50/395 (12%)
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
Q SS+ +A + AT + ++H+ + G +V + L+ YA F ++ +F
Sbjct: 72 QTLFSSISRALASAATTTQL-HKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 130
Query: 153 -TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
A S N WN++I +AL +SE R +P +++ SV A A
Sbjct: 131 RLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDF 190
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E K +H V+ G ++GN L+DMY + ++ A KVF + RDVVSWNS+++G
Sbjct: 191 EMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGY 250
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
+G + + + G+ P+ T VL AC G ++EG L++K G++ +
Sbjct: 251 NANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDV 310
Query: 332 -------AHYVTFVDLL-GR-----------------------AGLLDRALKFIREM--P 358
+ Y F L+ GR GL + ++K EM
Sbjct: 311 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ 370
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERI----FELDPHDSGPHILLANIYASAGRLN 414
+P ++L AC ++E G Y + + +E D S +L N+YA G L
Sbjct: 371 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN---ILINMYAKCGNLL 427
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
+ SG+K + + SW + +++++ N
Sbjct: 428 ASQEVF-----SGMKCKDSVSW---NSMINVYIQN 454
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 332/566 (58%), Gaps = 43/566 (7%)
Query: 3 THLKKLKEA-RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
T K+ EA + + + + D+ + +++ Y+K G L AR++FD+MP +D+V W
Sbjct: 125 TRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAW 184
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G SQ++ P A +F QM+ D +G +
Sbjct: 185 NAMIAGLSQSEDPYVARRVFDQMV--------------------DQDDVSWGT------M 218
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY N +++ FD+M V+WN +IA + + ++A+
Sbjct: 219 MAGYAHN----GCFVEVLELFDKM-----------KLGNVTWNVIIAAYMQNGHAKEAIS 263
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+F +M E F P ++ SV A A + +G HA +I+ G VGN+L+DMYA
Sbjct: 264 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 323
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ +EK+FN + +D VSWN+ML+G A HG G + F M + + + V+F+
Sbjct: 324 KCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 383
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC HAGL++EG+ F ++ K+ ++P+ HY VDLLGRAGL D L FI+ MP+E
Sbjct: 384 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 443
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VWGALLG+CRMH NV+LG A + + +L+P + ++L++IYA +GR DA +AR
Sbjct: 444 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 503
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
M + G+KK P CSWVE KN VH F D +HPQ +H W + EK+++IGYVPD S
Sbjct: 504 SKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRS 563
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++++E L HSE+LA+ FAL++TPPGSTI I KN+RVC DCH+ KF SK+
Sbjct: 564 CVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKIT 623
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD RFHHF DG CSC DYW
Sbjct: 624 TRRIIVRDATRFHHFEDGICSCNDYW 649
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/561 (40%), Positives = 345/561 (61%), Gaps = 14/561 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K+ EAR + + G D+ N +++ YA+ G + EAR+LFD PV+D+ TWTA++S
Sbjct: 208 KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY+QN E A +F M + N + ++++ A D+ + +
Sbjct: 264 GYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN ++L YA+ +++A +F + K+ VSW A++A +++ E+ L+ F EM
Sbjct: 320 WN-----TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R G +++ V + A +LE G +H +I++G + FVGN L+ MY K G++
Sbjct: 375 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 434
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
EDA F + +RDVVSWN+M+ G A+HG GK + F+ M P+ +T + VL AC
Sbjct: 435 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+++G YF M GV + HY +DLLGRAG L A +++MP EP + +
Sbjct: 495 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 554
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGA R+H+N ELG AAE+IFEL+P ++G ++LL+NIYAS+G+ DA + R MM+E
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK P SW+E +N VH F A D HP++ I+ ++ ++K+ GYV + VL
Sbjct: 615 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 674
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E L+ HSEKLA+A+ +++ PPG I + KN+RVCGDCH+AFK+ S + R I+
Sbjct: 675 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 734
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD+NRFHHFR G CSCGDYW
Sbjct: 735 LRDSNRFHHFRGGSCSCGDYW 755
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 52/326 (15%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+L+A A L +AR LFDEMPV+D VT+ +IS ++ + A F L
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD------LA 157
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCL-KYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P + +S +G A + GR A L +W+V ++L+ Y ++ +M +A
Sbjct: 158 PEKDAVS----WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 213
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH--FSYSSVFTALAS 207
LF + ++ VSWN +++G+AR+ + +A R F P F++++V + A
Sbjct: 214 ELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDA------APVRDVFTWTAVVSGYAQ 267
Query: 208 TGSLEQGKWV-----HAHVIKSGGQLVAFVG----------------------NTLVDMY 240
G LE+ + V + + + A++ NT++ Y
Sbjct: 268 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGY 327
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A++G +E+A+ VF+ + ++D VSW +ML +Q G + T++ F +M R G N+ F
Sbjct: 328 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFA 387
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHG 326
CVL+ C+ L+ G M+ HG
Sbjct: 388 CVLSTCADIAALECG------MQLHG 407
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 161/350 (46%), Gaps = 26/350 (7%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
+ ++ N + A+ + G + +A +LF MP + T+ A+++GYS N + A LF
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+ R P+ ++ +++L A ++ ++ +NV + S +A
Sbjct: 94 AIPR----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANH 144
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+ A F K+ VSWN ++A + R E+A F+ E S++++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----EWDVISWNALM 200
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ G + + + + + G +V++ N +V YA+ G + +A ++F+ RDV
Sbjct: 201 SGYVQWGKMSEARELFDRM--PGRDVVSW--NIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
+W ++++G AQ+G+ + R F+ M N V++ ++ A ++DE + F +M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
V A + T + +AG+L+ A MP + A W A+L A
Sbjct: 313 PCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ +H ++ + + + N +L Y KCG +++AR F+EM +D+V+W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ + A+ +F M KP+ TL VL A +K ++
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
+G + ++D+ R ++ +A L + + W AL+ G +R +
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL-GASRIHRNPELG 571
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
R+ +E + E EP + + + + ++ GKW A ++
Sbjct: 572 RSAAEKIFE-LEPENAGMYVLLSNIYAS----SGKWRDARKMR 609
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 333/516 (64%), Gaps = 8/516 (1%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L RK+F+ MP +D+V+W +ISG +QN E+A+++ +M L+P+ FTLSSVL
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
K G+++H + ++ GYD +V++GSSL+DMYA+ ++DD+ +F L + +S
Sbjct: 206 FAEYVNLLK-GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 264
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN++IAG + ++ L+ F +ML +P H S+SS+ A A +L GK +H ++I
Sbjct: 265 WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 324
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+S F+ + LVDMYAK G+I A +F+++ D+VSW +M+ G A HG +
Sbjct: 325 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAIS 384
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLL 341
F++M G+ PN V F+ VLTACSHAGL+DE YF ++ + + + P HY DLL
Sbjct: 385 LFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL 444
Query: 342 GRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI 401
GR G L+ A +FI +M IEPT +VW LL ACR+HKN+EL ++++F +DP + G ++
Sbjct: 445 GRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYV 504
Query: 402 LLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK 461
LL+NIY++AGR DA + R M++ G+KK+PACSW+E KN VH FVA D +HP I++
Sbjct: 505 LLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINE 564
Query: 462 KWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKK 521
+ + E++++ GYV D++ VL +++++ L HSE+LA+ F +ISTP G+TI + K
Sbjct: 565 ALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTK 624
Query: 522 NIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRD 557
N+RVC DCH+A KF SK+V REI+ F+ F D
Sbjct: 625 NLRVCVDCHTATKFISKIVGREIV------FYFFLD 654
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 148/270 (54%), Gaps = 5/270 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + + +H + + + + D+ + +++++ YAKC +D++ ++F +P D ++W ++I+G
Sbjct: 212 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 271
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
QN + + F QML +KPN + SS++ A A T G+Q+H + ++ +D
Sbjct: 272 CVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC-AHLTTLHLGKQLHGYIIRSRFDG 330
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV++ S+L+DMYA+ + A ++F +E + VSW A+I G+A A+ F M
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 390
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGS 245
EG +P + ++ +V TA + G +++ W + + + +++ + + + D+ + G
Sbjct: 391 VEGVKPNYVAFMAVLTACSHAGLVDEA-WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 449
Query: 246 IEDAEKVFNRLLKRDVVS-WNSMLTGCAQH 274
+E+A + + + S W+++L C H
Sbjct: 450 LEEAYEFISDMHIEPTGSVWSTLLAACRVH 479
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 41/261 (15%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + +H +I+ S F ++ + + +++ YAKCG + AR +FD+M + DMV+W
Sbjct: 307 CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSW 366
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TA+I GY+ + +AI LF +M G+KPN +VL A S AG D+ +
Sbjct: 367 TAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAW-------- 418
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
KY F+ M + + LE + A+ R E+A
Sbjct: 419 -KY------------------FNSMTQDYRIIPGLE-----HYAAVADLLGRVGRLEEAY 454
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDM 239
S+M EPT +S++ A ++E + V + Q + A+V L ++
Sbjct: 455 EFISDM---HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYV--LLSNI 509
Query: 240 YAKSGSIEDAEKVFNRLLKRD 260
Y+ +G +DA K+ R+ RD
Sbjct: 510 YSAAGRWKDARKL--RIAMRD 528
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/561 (40%), Positives = 345/561 (61%), Gaps = 14/561 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K+ EAR + + G D+ N +++ YA+ G + EAR+LFD PV+D+ TWTA++S
Sbjct: 83 KMSEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 138
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY+QN E A +F M + N + ++++ A D+ + +
Sbjct: 139 GYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 194
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN ++L YA+ +++A +F + K+ VSW A++A +++ E+ L+ F EM
Sbjct: 195 WN-----TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEM 249
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R G +++ V + A +LE G +H +I++G + FVGN L+ MY K G++
Sbjct: 250 GRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNM 309
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
EDA F + +RDVVSWN+M+ G A+HG GK + F+ M P+ +T + VL AC
Sbjct: 310 EDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 369
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+++G YF M GV + HY +DLLGRAG L A +++MP EP + +
Sbjct: 370 SHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM 429
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGA R+H+N ELG AAE+IFEL+P ++G ++LL+NIYAS+G+ DA + R MM+E
Sbjct: 430 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 489
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK P SW+E +N VH F A D HP++ I+ ++ ++K+ GYV + VL
Sbjct: 490 RGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHD 549
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E L+ HSEKLA+A+ +++ PPG I + KN+RVCGDCH+AFK+ S + R I+
Sbjct: 550 VEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLIL 609
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD+NRFHHFR G CSCGDYW
Sbjct: 610 LRDSNRFHHFRGGSCSCGDYW 630
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ +H ++ + + + N +L Y KCG +++AR F+EM +D+V+W
Sbjct: 268 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 327
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ + A+ +F M KP+ TL VL A +K ++
Sbjct: 328 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 387
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
+G + ++D+ R ++ +A L + + W AL+ G +R +
Sbjct: 388 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL-GASRIHRNPELG 446
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
R+ +E + E EP + + + + ++ GKW A ++
Sbjct: 447 RSAAEKIFE-LEPENAGMYVLLSNIYAS----SGKWRDARKMR 484
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/589 (37%), Positives = 345/589 (58%), Gaps = 35/589 (5%)
Query: 11 ARIVHAHILGSAFKNDIAMQ-NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
RI A IL I + N ++ Y + G ++EA++LFD+MP ++ ++W +I+GY+
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
QN + E A+ L ++ R G+ P+ +L+S+ A + + G QVH+ +K G +N
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC-SNIVALETGTQVHSLAVKVGCQFNS 454
Query: 130 YVGSSLLDMYARF-------------------------------DQMDDAWFLFTALESK 158
+ ++L+ MY + D +D+A F + S+
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR 514
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
++VSW +I+ +A + +A+ F M E P + + S G+ + G+ +H
Sbjct: 515 DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIH 574
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
IK G V N L+ MY K G D+ ++F+ + +RD+ +WN+++TG AQHGLG+
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGR 633
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTF 337
++ ++ M G+ PN+VTF+ +L ACSHAGL+DEG +F M + +G+ P HY
Sbjct: 634 EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACM 693
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
VDLLGR G + A +FI +MPIEP +W ALLGAC++HKN E+G AAE++F ++P ++
Sbjct: 694 VDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNA 753
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
G +++L+NIY+S G + A RK+MK+ GV KEP CSW + K+ +H FV D H Q
Sbjct: 754 GNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIE 813
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
I E+ +K GYVPD+ VL D++++E+ L HSEKLA+A+ L++TP G I
Sbjct: 814 EIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPI 873
Query: 518 HIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+R+CGDCH+ KF S V +R+I +RD NRFHHFR+G CSC D+W
Sbjct: 874 QILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 221/501 (44%), Gaps = 43/501 (8%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK-CGCLDEARKLFDEMPVKDMVTWT 62
+L L+ R++ L + F+ D+ + ILN Y++ LD A K F+ M ++ TW+
Sbjct: 239 NLDVLESLRVL---ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAFC 120
+I+ S + + AI ++ R +K + + + G DD Q+
Sbjct: 296 TMIAALSHGGRIDAAIAVYE---RDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPI 352
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ WN +L+ Y + +++A LF + +N +SW +IAG+A+ E+AL
Sbjct: 353 V---VSWN-----ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEAL 404
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
E+ R G P+ S +S+F A ++ +LE G VH+ +K G Q +F N L+ MY
Sbjct: 405 GLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMY 464
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K ++E A +VF+R++ +D+VSWNS L Q+ L F+ ML + + V++
Sbjct: 465 GKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML----SRDDVSWT 520
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+++A +HA +E G F M E E + LLG G L A K ++ I
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMF---CEHELPNSPILTILLGVCGSLG-ASKIGQQ--IH 574
Query: 361 PTAAVWGA----LLGACRMHKNVELGAYAAERIFEL-DPHDSGPHILLANIYASAGRLND 415
A G ++ + + G + RIF+L + D + YA G +
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCGCADSRRIFDLMEERDIFTWNTIITGYAQHGLGRE 634
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A + + M+ +GV N V FV +A ++ + W+ + G
Sbjct: 635 AIKMYQHMESAGV----------LPNEV-TFVGLLNACSHAGLVDEGWKFFKSMSQDYGL 683
Query: 476 VPDSSHVLSYADQQEREAKLQ 496
P H D R +Q
Sbjct: 684 TPLPEHYACMVDLLGRTGDVQ 704
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 158/362 (43%), Gaps = 41/362 (11%)
Query: 38 AKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA---------------IILFS 82
+ G + EAR++FD MP +D++ W ++IS Y N P+ A IL S
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 83 QMLRLG------------LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
RLG L+ N ++++ R A + WN
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWN-- 162
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
S+L Y QM DA LF + +N VSW +I+G+ R KA F +M REG
Sbjct: 163 ---SMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREG 219
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED-A 249
P +++S +A+ G+L+ + + +K+G + +G ++++Y++ S+ D A
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTA 279
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
K F +++R+ +W++M+ + G A + +E+ IA ++T +
Sbjct: 280 IKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA----LITGLAQC 335
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
G +D+ + F + EP + + + G+++ A + +MP T + G +
Sbjct: 336 GRIDDARILFEQIP----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMI 391
Query: 370 LG 371
G
Sbjct: 392 AG 393
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L K + +H + +++ + N +++ Y KCGC D +R++FD M +D+ TW
Sbjct: 561 CGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTW 619
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+Q+ AI ++ M G+ PN+ T +L A D+ + +
Sbjct: 620 NTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQ 679
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
YG + ++D+ R + A F++ + V W+AL+ E
Sbjct: 680 DYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGK 739
Query: 181 RTFSEMLREGFEPT----HFSYSSVFTALASTGSLEQGKWVHAH--VIKSGG 226
R ++ R EP+ + S+++++L G + + + + VIK G
Sbjct: 740 RAAEKLFR--IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPG 789
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/555 (39%), Positives = 349/555 (62%), Gaps = 4/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA+ + + +D+ + N++++ YAK + +FD+MP KD+V+WT +I+G++QN
Sbjct: 441 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 500
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF ++ G+ + +SS+L A +G +++H++ ++ G ++ + +
Sbjct: 501 HSRALELFREVQLEGIDLDVMMISSILLAC-SGLKLISSVKEIHSYIIRKGLS-DLVLQN 558
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
++D+Y +D A +F +E K+ VSW ++I+ + +AL F M G EP
Sbjct: 559 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 618
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S S+ +A AS +L++GK +H +I+ G L + +TLVDMYA+ G++E + VF
Sbjct: 619 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 678
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +D+V W SM+ HG G+A + F +M IAP+ + F+ VL ACSH+GL++
Sbjct: 679 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 738
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ + MK ++ +EP HYV VDLLGRA L+ A +F++ M +EPTA VW ALLGA
Sbjct: 739 EGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 798
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++H N ELG AA+++ E+DP + G ++L++N+YA+ R D R MK SG+KK P
Sbjct: 799 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNP 858
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSHVLSYADQQER 491
CSW+E N VH F+A D +HPQ I+ K +I+EK+ K+ GYV + VL A ++E+
Sbjct: 859 GCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEK 918
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L HSE+LA+A+ +++TP G+++ I KN+RVCGDCH+ K SK ERE+++RD NR
Sbjct: 919 VQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANR 978
Query: 552 FHHFRDGFCSCGDYW 566
FHHF+ G CSCGD W
Sbjct: 979 FHHFKGGVCSCGDVW 993
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 186/344 (54%), Gaps = 3/344 (0%)
Query: 2 CTHLKKLKEARIVHAHILGS-AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C K L E + VHAH++ S A N + + ++ Y KCGCL +A KLFD MP K + T
Sbjct: 124 CGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFT 183
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+I Y N +P ++ L+ +M G+ + T +LKA G D + G +VH
Sbjct: 184 WNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGL-LKDRRCGAEVHGLA 242
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
+K GY V+V +S++ MY + + ++ A LF + K + VSWN++I+ ++ + +A
Sbjct: 243 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 302
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR F EM + P +++ + A + ++QG ++HA V+KS + FV N L+ M
Sbjct: 303 LRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAM 362
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ G + +A +F + D +SWNSML+G Q+GL ++++ +M G P+ V
Sbjct: 363 YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAV 422
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
+ ++ A + +G G A K+G++ + + VD+ +
Sbjct: 423 ISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 466
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 222/435 (51%), Gaps = 46/435 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C LK + VH + + + + + N+I+ Y KC L+ AR+LFD MP K D+V+
Sbjct: 226 CGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVS 285
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ---VH 117
W ++IS YS N Q A+ LF +M + L PN +T + L+A D F +Q +H
Sbjct: 286 WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA----CEDSSFIKQGMFIH 341
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A LK Y NV+V ++L+ MYARF +M +A +F ++ + +SWN++++G +
Sbjct: 342 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 401
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL+ + EM G +P + S+ A A +G+ G +HA+ +K+G VGN+LV
Sbjct: 402 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLV 461
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK S++ + +F+++ +DVVSW +++ G AQ+G + F ++ GI + +
Sbjct: 462 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 521
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L ACS L+ + + + + G+ DL+ + G++D
Sbjct: 522 MISSILLACSGLKLISSVKEIHSYIIRKGLS----------DLVLQNGIVD--------- 562
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL-DPHDSGPHILLANIYASAGRLNDA 416
+ G C NV+ YAA R+FEL + D + + Y G N+A
Sbjct: 563 -----------VYGEC---GNVD---YAA-RMFELIEFKDVVSWTSMISCYVHNGLANEA 604
Query: 417 ARARKMMKESGVKKE 431
+MKE+GV+ +
Sbjct: 605 LELFHLMKETGVEPD 619
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 193 PTHFS----YSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMYAKSGSIE 247
P+ FS YSSV S +L +G+ VHAH+I S F+ LV MY K G +
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DAEK+F+ + + + +WN+M+ +G ++ + +M +GI + TF C+L AC
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC- 226
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYV------TFVDLLGRAGLLDRALKFIREMPIEP 361
GLL + + + HG+ +E + + V + + L+ A + MP +
Sbjct: 227 --GLLKDRR---CGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 281
Query: 362 TAAVWGALLGA 372
W +++ A
Sbjct: 282 DVVSWNSMISA 292
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K+ + +H ++ F + ++ +T+++ YA+CG L+++R +F+ + KD+V WT++I+ Y
Sbjct: 637 KKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAY 696
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
+ AI LF +M + P+ +VL A ++ R + + +KY Y
Sbjct: 697 GMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES--MKYEYQLE 754
Query: 129 V----YVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGEKAL 180
YV L+D+ R + +++A+ +E + W AL+ H+ K GE A
Sbjct: 755 PWPEHYV--CLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAA 812
Query: 181 RTFSEM 186
+ EM
Sbjct: 813 QKLLEM 818
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/542 (40%), Positives = 334/542 (61%), Gaps = 10/542 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ NT+++ YA+ G L +A++LF+E P++D+ TWTA++SGY QN + A F +M
Sbjct: 231 DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP 290
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
N+ + +++L G A + WN +++ Y + +
Sbjct: 291 ----VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWN-----TMITGYGQNGGI 341
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A LF + ++ VSW A+I+G+A+ E+AL F EM R+G ++S +
Sbjct: 342 AQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTC 401
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A +LE GK VH V+K+G + FVGN L+ MY K GS ++A VF + ++DVVSWN
Sbjct: 402 ADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWN 461
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
+M+ G A+HG G+ + FE M + G+ P+++T + VL+ACSH+GL+D G YF M +
Sbjct: 462 TMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRD 521
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ V+P HY +DLLGRAG L+ A +R MP +P AA WGALLGA R+H N ELG
Sbjct: 522 YNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEK 581
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AAE +F+++P +SG ++LL+N+YA++GR D + R M+E+GV+K SWVE +N +H
Sbjct: 582 AAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIH 641
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F D HP++ I+ E+ K+++ GYV + VL +++E+E L+ HSEKLA+
Sbjct: 642 TFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 701
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF +++ P G I + KN+RVC DCH+A K SK+V R II+RD++RFHHF +G CSCGD
Sbjct: 702 AFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGD 761
Query: 565 YW 566
YW
Sbjct: 762 YW 763
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VH ++ + F+ + N +L Y KCG DEA +F+ + KD+V+W
Sbjct: 401 CADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSW 460
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+++ A++LF M + G+KP++ T+ VL A D+ ++
Sbjct: 461 NTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR 520
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
Y + ++D+ R ++++A L + SW AL+ H GE
Sbjct: 521 DYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE 580
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
KA +M EP + S L S G+WV ++S
Sbjct: 581 KAAEMVFKM-----EPQN----SGMYVLLSNLYAASGRWVDVGKMRS 618
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 37/278 (13%)
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
V+WN I+ H R + ALR F+ M R + SY+++ +G L K+ A
Sbjct: 47 VTWNKAISSHMRNGHCDSALRVFNSMPRR----SSVSYNAMI-----SGYLRNAKFSLAR 97
Query: 221 -VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+ + F N ++ Y ++ + +A K+F+ + K+DVVSWN+ML+G AQ+G
Sbjct: 98 DLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDE 157
Query: 280 TVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV 338
F KM RN I+ N +L A H G L E + F +++
Sbjct: 158 AREVFNKMPHRNSISWNG-----LLAAYVHNGRLKEARRLFE-------SQSNWELISWN 205
Query: 339 DLLG---RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA-AERIFELDP 394
L+G + +L A + MP+ + W ++ ++G + A+R+F P
Sbjct: 206 CLMGGYVKRNMLGDARQLFDRMPVRDVIS-WNTMISGY-----AQVGDLSQAKRLFNESP 259
Query: 395 -HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
D + + Y G +++ ARK E VK E
Sbjct: 260 IRDVFTWTAMVSGYVQNGMVDE---ARKYFDEMPVKNE 294
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 22/244 (9%)
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN + S + R D A +F ++ ++ VS+NA+I+G+ R ++ A F +M
Sbjct: 49 WNKAISSHM-----RNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM 103
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
E FS++ + T L + + + K +V++ N ++ YA++G +
Sbjct: 104 P----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK--DVVSW--NAMLSGYAQNGFV 155
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
++A +VFN++ R+ +SWN +L +G K R FE + +++ C++
Sbjct: 156 DEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWEL----ISWNCLMGGY 211
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+L + + F M V + T + + G L +A + E PI W
Sbjct: 212 VKRNMLGDARQLFDRMPVRDV----ISWNTMISGYAQVGDLSQAKRLFNESPIRDV-FTW 266
Query: 367 GALL 370
A++
Sbjct: 267 TAMV 270
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 345/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ V + +K+D+ + +++L+ YA+ G + +A K+F MP +D VTW
Sbjct: 118 CARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTW 177
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +++G+ QP +AI ++ +M G+K ++ + V++A A A + + G VH L
Sbjct: 178 STMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTA-ARNVRMGASVHGHLL 236
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G +V +SL+DMYA+ +D A +F + +N+VSW+A+I+G A+ + ++ALR
Sbjct: 237 RHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALR 296
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P + S A ++ G L+ G+ VH +++ +G +DMY+
Sbjct: 297 LFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRF-DFNCILGTAAIDMYS 355
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A+ +FN + RD++ WN+M+ C HG G+ + F++M G+ P+ TF
Sbjct: 356 KCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFAS 415
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL++EG+ +F M H + P E HYV VDLL R+GL++ A + M E
Sbjct: 416 LLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAE 475
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT A+W ALL C +K +ELG A+ I EL P D G L++N+YA+ + + + R
Sbjct: 476 PTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVR 535
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SG KK P CS +E + H+FV D +HPQR I K ++ +++++GY+P +
Sbjct: 536 KLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTE 595
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V +++ +E +L HSE+LA+AF L++T PG+ + I KN+RVCGDCH A K+ SK+
Sbjct: 596 FVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIA 655
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD RFHHF+DG CSC DYW
Sbjct: 656 DREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
H+R+ ALR F L P +++ +A A G L G+ V +G +
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV ++L+ +YA+ G++ DA KVF R+ +RD V+W++M+ G G ++ + +M
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ ++V + V+ AC+ A + G + +HG+ + + VD+ + GLLD
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 350 ALKFIREMPIEPTAAVWGALL 370
A + M + W A++
Sbjct: 263 ACRVFGLM-VHRNDVSWSAMI 282
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/589 (37%), Positives = 345/589 (58%), Gaps = 35/589 (5%)
Query: 11 ARIVHAHILGSAFKNDIAMQ-NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
RI A IL I + N ++ Y + G ++EA++LFD+MP ++ ++W +I+GY+
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
QN + E A+ L ++ R G+ P+ +L+S+ A + + G QVH+ +K G +N
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC-SNIVALETGTQVHSLAVKVGCQFNS 454
Query: 130 YVGSSLLDMYARF-------------------------------DQMDDAWFLFTALESK 158
+ ++L+ MY + D +D+A F + S+
Sbjct: 455 FACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR 514
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
++VSW +I+ +A + +A+ F M E P + + S G+ + G+ +H
Sbjct: 515 DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIH 574
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
IK G V N L+ MY K G D+ ++F+ + +RD+ +WN+++TG AQHGLG+
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGR 633
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTF 337
++ ++ M G+ PN+VTF+ +L ACSHAGL+DEG +F M + +G+ P HY
Sbjct: 634 EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACM 693
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
VDLLGR G + A +FI +MPIEP +W ALLGAC++HKN E+G AAE++F ++P ++
Sbjct: 694 VDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNA 753
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
G +++L+NIY+S G + A RK+MK+ GV KEP CSW + K+ +H FV D H Q
Sbjct: 754 GNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIE 813
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
I E+ +K GYVPD+ VL D++++E+ L HSEKLA+A+ L++TP G I
Sbjct: 814 EIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPI 873
Query: 518 HIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+R+CGDCH+ KF S V +R+I +RD NRFHHFR+G CSC D+W
Sbjct: 874 QILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 221/501 (44%), Gaps = 43/501 (8%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK-CGCLDEARKLFDEMPVKDMVTWT 62
+L L+ R++ L + F+ D+ + ILN Y++ LD A K F+ M ++ TW+
Sbjct: 239 NLDVLESLRVL---ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAFC 120
+I+ S + + AI ++ R +K + + + G DD Q+
Sbjct: 296 TMIAALSHGGRIDAAIAVYE---RDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPI 352
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ WN +L+ Y + +++A LF + +N +SW +IAG+A+ E+AL
Sbjct: 353 V---VSWN-----ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEAL 404
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
E+ R G P+ S +S+F A ++ +LE G VH+ +K G Q +F N L+ MY
Sbjct: 405 GLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMY 464
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K ++E A +VF+R++ +D+VSWNS L Q+ L F+ ML + + V++
Sbjct: 465 GKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML----SRDDVSWT 520
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+++A +HA +E G F M E E + LLG G L A K ++ I
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMF---CEHELPNSPILTILLGVCGSLG-ASKIGQQ--IH 574
Query: 361 PTAAVWGA----LLGACRMHKNVELGAYAAERIFEL-DPHDSGPHILLANIYASAGRLND 415
A G ++ + + G + RIF+L + D + YA G +
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCGCADSRRIFDLMEERDIFTWNTIITGYAQHGLGRE 634
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A + + M+ +GV N V FV +A ++ + W+ + G
Sbjct: 635 AIKMYQHMESAGV----------LPNEV-TFVGLLNACSHAGLVDEGWKFFKSMSQDYGL 683
Query: 476 VPDSSHVLSYADQQEREAKLQ 496
P H D R +Q
Sbjct: 684 TPLPEHYACMVDLLGRTGDVQ 704
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 158/362 (43%), Gaps = 41/362 (11%)
Query: 38 AKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA---------------IILFS 82
+ G + EAR++FD MP +D++ W ++IS Y N P+ A IL S
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 83 QMLRLG------------LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
RLG L+ N ++++ R A + WN
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWN-- 162
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
S+L Y QM DA LF + +N VSW +I+G+ R KA F +M REG
Sbjct: 163 ---SMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREG 219
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED-A 249
P +++S +A+ G+L+ + + +K+G + +G ++++Y++ S+ D A
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTA 279
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
K F +++R+ +W++M+ + G A + +E+ IA ++T +
Sbjct: 280 IKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA----LITGLAQC 335
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
G +D+ + F + EP + + + G+++ A + +MP T + G +
Sbjct: 336 GRIDDARILFEQIP----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMI 391
Query: 370 LG 371
G
Sbjct: 392 AG 393
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L K + +H + +++ + N +++ Y KCGC D +R++FD M +D+ TW
Sbjct: 561 CGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTW 619
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+GY+Q+ AI ++ M G+ PN+ T +L A D+ + +
Sbjct: 620 NTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQ 679
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
YG + ++D+ R + A F++ + V W+AL+ E
Sbjct: 680 DYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGK 739
Query: 181 RTFSEMLREGFEPT----HFSYSSVFTALASTGSLEQGKWVHAH--VIKSGG 226
R ++ R EP+ + S+++++L G + + + + VIK G
Sbjct: 740 RAAEKLFR--IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPG 789
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/515 (42%), Positives = 327/515 (63%), Gaps = 2/515 (0%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
M D V+W +LI G + E+A+ F +M +K +++TL SVL S A +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLN-SFASMKVMQN 59
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
VH +K G++ V ++L+DMYA+ ++D A +F+ + K+ VSW +L+ G++
Sbjct: 60 AISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSH 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
E+A++ F +M G P + +SV +A A ++ G+ +HA ++KSG + V
Sbjct: 120 NGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N+LV MYAK GSI DA + F+ + RDV+SW +++ G AQ+G GK +++++++M+ G
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRAL 351
P+ +TF+ +L ACSH GLL G+ YF M K +G++P HY +DLLGR+G L A
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
+ +M + P A VW ALL ACR+HK +ELG AA+ +FEL+P +S P+++L+N+Y++AG
Sbjct: 300 GLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAG 359
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
+ DAAR R++M+ G+ KEP SW+ET + V F++ D HP R I+ K EI IK
Sbjct: 360 KWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIK 419
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
+ GYVPD S L D + +E L HSEKLA+AF L++ P G+ I I KN+RVCGDCH+
Sbjct: 420 EAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHT 479
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A K+ SKV R II+RD+N FHHF +G CSCGDYW
Sbjct: 480 AMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 179/340 (52%), Gaps = 22/340 (6%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+K ++ A VH I+ + F+ + N +++ YAK G LD A +F +M KD+V+WT+L
Sbjct: 54 MKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSL 113
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++GYS N E AI LF +M G+ P+Q ++SVL A D FG+Q+HA +K G
Sbjct: 114 VTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMD-FGQQIHATLVKSG 172
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ ++ V +SL+ MYA+ + DA F + +++ +SW ALI G+A+ G+ +L+ +
Sbjct: 173 LESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYD 232
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWV-----HAHVIKSGGQLVAFVGNTLVDM 239
+M+ G +P + ++ + A + G L G+ + IK G + A ++D+
Sbjct: 233 QMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYA----CMIDL 288
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGK-ATVRWFEKMLRNGIAP 294
+SG + +A+ + N++ + D V W ++L C H LG+ A FE + P
Sbjct: 289 LGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFE------LEP 342
Query: 295 -NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
N + ++ + S AG ++ LM+ G+ E +
Sbjct: 343 MNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGY 382
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + +HA ++ S ++ +++ N+++ YAKCG + +A + FD MP +D+++W
Sbjct: 152 CAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISW 211
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALI GY+QN + ++++ + QM+ G KP+ T +L A A
Sbjct: 212 TALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDK 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAG---HARKSEGE 177
YG + ++D+ R ++ +A L + + + V W AL+A H GE
Sbjct: 272 VYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGE 331
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
A + E+ EP + S + L++ S GKW A I+
Sbjct: 332 MAAKNLFEL-----EPMN---SMPYVMLSNMYS-AAGKWEDAARIR 368
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/571 (40%), Positives = 346/571 (60%), Gaps = 19/571 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VH +++ + F ++++ N+++ ++ GC DEA +F +M KD+V+W
Sbjct: 306 CEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSW 365
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY +N PE A+ ++ M G+ P++ T++SVL A DK G +H F
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDK-GIMLHEFAD 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G V V +SL+DMY++ +D A +F + +KN +SW ++I G +AL
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF 484
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ +P + SV +A A G+L GK +HAH +++G F+ N L+DMY
Sbjct: 485 FFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYV 543
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G +E A FN ++DV SWN +LTG AQ G G V F KM+ + + P+++TF
Sbjct: 544 RCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTS 602
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS +G++ +G YF M+ K + P HY + VDLLGRAG L+ A +FI++MPI+
Sbjct: 603 LLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPID 662
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+WGALL ACR+++NVELG AA+ IFE+D G +ILL N+YA +G+ ++ AR R
Sbjct: 663 PDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVR 722
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M+E+ + +P CSWVE VH F+ DD HPQ I+ EK++ G
Sbjct: 723 KIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG------ 776
Query: 481 HVLSYADQQERE----AKLQV---HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
LS + R+ +K ++ HSE+LA+AF LI+T PG+ I + KN+ +C +CH+
Sbjct: 777 --LSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTV 834
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
KF SKVV R I VRDT +FHHF+DG CSCGD
Sbjct: 835 KFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 221/413 (53%), Gaps = 7/413 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + E VH+++ + + + + N +L+ + + G L EA +F +M +D+ +W
Sbjct: 104 CEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ GY++ + A+ L+ +ML +G++P+ +T VL+ G G D GR+VH +
Sbjct: 164 NVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCG-GLPDLARGREVHLHVI 222
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+YG++ +V V ++L+ MY + + A +F + ++ +SWNA+I+G+ + LR
Sbjct: 223 RYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLR 282
Query: 182 TFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M+RE F +P + +SV +A + G G+ VH +VIK+G V N+L+ M+
Sbjct: 283 LFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMH 341
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G ++AE VF+++ +D+VSW +M++G ++GL + V + M G+ P+++T
Sbjct: 342 SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIA 401
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+ GLLD+G + G+ + +D+ + +D+AL+ +P +
Sbjct: 402 SVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
+ +LG +++ E + + I L P+ + L ++ ++ R+
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNS----VTLVSVLSACARI 510
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/602 (37%), Positives = 351/602 (58%), Gaps = 41/602 (6%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KC L+ ++AR +L D T++ Y + G + AR +F+E+ VK V
Sbjct: 206 KCEALEATRDAR----KVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVV 261
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+ISGY + A LF +M+ + ++FT +SVL A A A G+ VH
Sbjct: 262 WNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSAC-ANAGFFAHGKSVHGQI 320
Query: 121 LKYGYDW----NVYVGSSLLDMYAR----------FDQM--------------------- 145
+ ++ + V ++L+ +Y++ FD M
Sbjct: 321 TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D A +F + KNE+SW +++G+ E AL+ F+ M E +P ++Y+ +A
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
GSL+ GK +H H+++ G + GN L+ MYA+ G++++A +F + D VSWN
Sbjct: 441 GELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWN 500
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M++ QHG G+ + F++M+ GI P++++FL VLTAC+H+GL+DEG YF MK+
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD 560
Query: 326 -GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+ P E HY +DLLGRAG + A I+ MP EPT ++W A+L CR ++ELGA+
Sbjct: 561 FGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+++F++ P G +ILL+N Y++AGR DAAR RK+M++ GVKKEP CSW+E N VH
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVH 680
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
+FV D HP+ ++K + +++++GYVPD+ VL + ++E L HSE+LA+
Sbjct: 681 VFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAV 740
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
F L+ PPG+T+ + KN+R+C DCH+ F SK V REI+VRD RFHHF+DG CSCG+
Sbjct: 741 GFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 800
Query: 565 YW 566
YW
Sbjct: 801 YW 802
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 178/410 (43%), Gaps = 67/410 (16%)
Query: 1 KCTHLKKLKEA------------RIVHAHIL-------GSAFKNDI--AMQNTILNAYAK 39
+C H + L A R++H + L + F+ D +++ AYA
Sbjct: 41 RCLHARLLTSALLHAPPHPHLTLRLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAA 100
Query: 40 CGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTL 96
G L A FD +P +D V A+IS Y++ A+ +F +L G L+P+ ++
Sbjct: 101 AGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSF 160
Query: 97 SSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-------------F 142
+++L A+G + Q+ LK G + V ++L+ +Y +
Sbjct: 161 TALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVL 220
Query: 143 DQMDD---------------------AWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
D+M D A +F ++ K +V WNA+I+G+ +A
Sbjct: 221 DEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFE 280
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA----FVGNTLV 237
F M+ E F+++SV +A A+ G GK VH + + V V N LV
Sbjct: 281 LFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALV 340
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+Y+K G+I A ++F+ + +DVVSWN++L+G + V FE+M N++
Sbjct: 341 TLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK----NEL 396
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+++ +++ H G ++ F M+ V+P + Y + G G L
Sbjct: 397 SWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSL 446
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 355/571 (62%), Gaps = 6/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L + +H H++ D + ++N Y++ +D ARK+FD+ + + W
Sbjct: 88 CTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVW 147
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHA 118
AL + + L+ +M R+G+ ++FT + VLKA A GR++H
Sbjct: 148 NALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHG 207
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L++G++ +V++ ++LLDMYARF + +A +F + KN VSW+A+IA +++ + +
Sbjct: 208 HILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLE 267
Query: 179 ALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F +M+ E + P + SV A A+ +LEQGK +H ++++ G + V + L
Sbjct: 268 ALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSAL 327
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V +YA+ G++E +VF R+ KRDVVSWNS+++ HG G+ ++ F++M+ G++P+
Sbjct: 328 VTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSP 387
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
++F+ VL ACSHAGL++EG+ F ++++ H + P HY VDLLGRA LD A K I
Sbjct: 388 ISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIID 447
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+M IEP VWG+LLG+CR+H NVEL A R+FEL+P ++G ++LLA+IYA A N+
Sbjct: 448 DMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNE 507
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R + +++ G++K P S +E + ++ F++ D+ +PQ +H ++S ++K+ GY
Sbjct: 508 VKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGY 567
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VPD+ VL D +E+E + HSEKLALAF LI++ G TI I KN+R+C DCHS KF
Sbjct: 568 VPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKF 627
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK REI+VRD NRFH F+DG CSCGDYW
Sbjct: 628 ISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
N LI ++ +AL+ S+ PT +Y + + SL QG +H H+I
Sbjct: 51 NPLIQSLCKQGNLNQALQVLSQ----EPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
G F+ L++MY++ SI++A KVF++ KR + WN++ G G+ +
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 284 FEKMLRNGIAPNQVTFLCVLTAC----SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
+ +M R G+ ++ T+ VL AC + LL G+ + +HG E T +D
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+ R G + A + +MP++ + W A++ AC L A R L+ D P
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVS-WSAMI-ACYSKNGKPLEALELFRKMMLENQDLLP 284
Query: 400 H 400
+
Sbjct: 285 N 285
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/567 (38%), Positives = 346/567 (61%), Gaps = 4/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK ++ + + +++ + F+ D M+N +L + KCG + +A +LFDEMP ++ V+W
Sbjct: 142 CIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSW 201
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY + A LF M T +++++AS AG GRQ+H+ +
Sbjct: 202 GTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRAS-AGLEIIFPGRQLHSCAI 260
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +++V +L+DMY++ ++DA +F + K V WN++IAG+A E+AL
Sbjct: 261 KAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALD 320
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ EM G + HF++S + + S+ + K VHA ++++G L LVD Y+
Sbjct: 321 LYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYS 380
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++DA VF+R+ R+++SWN+++ G HG G+ + FEKMLR G+ PN VTFL
Sbjct: 381 KWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLA 440
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS +GL + G F ++ + H V+P H+ ++LLGR GLLD A IR+ P +
Sbjct: 441 VLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQ 500
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA +W ALL ACR+H N+ELG +AAE+++ ++P +I+L NIY S+G+L +AA
Sbjct: 501 PTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVF 560
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ +K G++ PACSW+E N H F++ D H Q + K E+ I ++GYVP+
Sbjct: 561 QTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQ 620
Query: 481 HVLSYADQQEREAKLQV-HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ + D E E K+++ HSEKLA+A+ L++T + + I ++ R+C DCHS K + +
Sbjct: 621 NFM-LPDVDENEEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMI 679
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI++RD +RFHHFRDG CSCGDYW
Sbjct: 680 TKREIVIRDASRFHHFRDGSCSCGDYW 706
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/565 (38%), Positives = 336/565 (59%), Gaps = 22/565 (3%)
Query: 4 HLKKLKEARIVHAHILGSAF--KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
+L +K R VH +I+ + K +++M +++ Y K GCL A++LFD + + +V+W
Sbjct: 201 NLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSW 260
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+G ++ + + F++ML L PN+ TL S++ G T D G+ HA+ L
Sbjct: 261 TVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLD-LGKWFHAYLL 319
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ ++ + ++L+DMY + Q+ A LF ++ K+ W+ LI+ +A S ++
Sbjct: 320 RNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFN 379
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EML +P + + S+ + A G+L+ GKW HA++ + G ++ + L++MYA
Sbjct: 380 LFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYA 439
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +FN ++RD+ WN+M+ G + HG GK + F +M +G+ PN +TF+
Sbjct: 440 KCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVS 499
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+ ACSH+GL++ HY VDLLGRAG LD A I MP+ P
Sbjct: 500 IFHACSHSGLME-------------------HYGCLVDLLGRAGHLDEAHNIIENMPMRP 540
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+WGALL AC++HKN+ LG AA +I ELDP + G +L +NIYASA R ND R+
Sbjct: 541 NTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRE 600
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
M SG+KKEP SW+E +VH F + D A Q +++ E+ K+++ GY P+++
Sbjct: 601 AMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAA 660
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL D++E+E+ L HSEKLA AF LIST PG+ I I KN+R+C DCH+A K SK+
Sbjct: 661 VLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYG 720
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHF +G+CSC YW
Sbjct: 721 RTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 197/392 (50%), Gaps = 7/392 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H + F +D+ + N ++N Y KCGCL AR +FD+MP +D+V+WT ++ Y +
Sbjct: 107 GRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVR 166
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD--WN 128
+ A+ L +M +G+K + L S++ G D K GR VH + ++ D
Sbjct: 167 SKAFGEALRLVREMQFVGVKLSGVALISLIAVFG-NLLDMKSGRAVHGYIVRNVGDEKME 225
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V + ++L+DMY + + A LF L ++ VSW +IAG R ++ + F+ ML
Sbjct: 226 VSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLE 285
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
E P + S+ T G+L+ GKW HA+++++G + + L+DMY K G +
Sbjct: 286 EKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGY 345
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A +FN + K+DV W+ +++ A F +ML N + PN VT + +L+ C+
Sbjct: 346 ARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAE 405
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
AG LD G+ A + +HG+E + +++ + G + A E ++ +W
Sbjct: 406 AGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNT 464
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
++ MH G A E E++ H P+
Sbjct: 465 MMAGFSMHG---CGKEALELFSEMESHGVEPN 493
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 26/373 (6%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+HL L++ +HAH + + F N F + +
Sbjct: 18 SHLN-LQQTHQLHAHFIKTQFHN--------------------PHPFFSQSHFTPEANYN 56
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKP-NQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LIS Y+ N P+ + + M + F L S+LKA ++ D GR++H F
Sbjct: 57 LLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGD-LGRELHGFAQ 115
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +V+V ++L++MY + + A +F + ++ VSW ++ + R +ALR
Sbjct: 116 KNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALR 175
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDM 239
EM G + + + S+ + ++ G+ VH +++++ G ++ + L+DM
Sbjct: 176 LVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDM 235
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G + A+++F+RL KR VVSW M+ GC + + F +ML + PN++T
Sbjct: 236 YCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITL 295
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L ++T C G LD G+ + A + ++G A +D+ G+ G + A +
Sbjct: 296 LSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVK- 354
Query: 360 EPTAAVWGALLGA 372
+ +W L+ A
Sbjct: 355 KKDVKIWSVLISA 367
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + L + HA++L + F +A+ +++ Y KCG + AR LF+ + KD+
Sbjct: 301 ECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKI 360
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAF 119
W+ LIS Y+ + LF +ML +KPN T+ S+L + AGA D G+ HA+
Sbjct: 361 WSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALD--LGKWTHAY 418
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++G + +V + ++L++MYA+ + A LF ++ WN ++AG + G++A
Sbjct: 419 INRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEA 478
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L FSEM G EP ++ S+F A + +G +E LVD+
Sbjct: 479 LELFSEMESHGVEPNDITFVSIFHACSHSGLMEH-------------------YGCLVDL 519
Query: 240 YAKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQH---GLGKATVR 282
++G +++A + N ++ + + W ++L C H LG+ R
Sbjct: 520 LGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAAR 566
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + HA+I + D+ ++ ++N YAKCG + AR LF+E +D+ W
Sbjct: 403 CAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMW 462
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++G+S + + A+ LFS+M G++PN T S+ A + +G
Sbjct: 463 NTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEHYG-------- 514
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
L+D+ R +D+A + + + N + W AL+A H + GE
Sbjct: 515 ------------CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGE 562
Query: 178 KALRTFSEMLREGFEPTHFSYS 199
A R E+ +P + YS
Sbjct: 563 VAARKILEL-----DPQNCGYS 579
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/568 (39%), Positives = 342/568 (60%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ R + ILG+ + + +Q +++ Y K G +A +F M +D+V W
Sbjct: 86 CTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAW 145
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+++ Y++N P A+ LF QM G+ PN+ TL S L A A D + G +H
Sbjct: 146 SAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDAC-ASLGDLRSGALMHQRVE 204
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G V VG++L+++Y + +++ A F + KN V+W+A+ A +AR A+R
Sbjct: 205 AQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIR 264
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH--AHVIKSGGQLVAFVGNTLVDM 239
M EG P ++ SV A A+ +L+QG+ +H HV+ G + +V LV+M
Sbjct: 265 VLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNM 324
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G++ A +F+++ D+V WNS++ AQHG + + FE+M G+ P +TF
Sbjct: 325 YSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITF 384
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL ACSHAG+LD+G+ +F + + HG+ PE H+ VDLLGRAG + + + MP
Sbjct: 385 TSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMP 444
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
EP W A LGACR ++N++ +AAE +F+LDP P++LL+N+YA AGR +D AR
Sbjct: 445 FEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVAR 504
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ M+ KE SW+E K+ VH F++ D HP+ IH + + +++ +K GYVPD
Sbjct: 505 MRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPD 564
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ VL Q+ +E + HSEKLA+AFAL++TP GS I + KN+RVC DCH+A KF SK
Sbjct: 565 TEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISK 624
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V REI+VRD NRFH F++G CSCGDYW
Sbjct: 625 LVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++ Y KC D+A +F + K++ +WT +++ +++N + + F ML G+
Sbjct: 14 NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P + +S L A A + GR + L G + V ++L+ +Y + DA
Sbjct: 74 PGEVGISIFLSAC-TDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAAS 132
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + ++ V+W+A++A +AR +AL F +M +G P + S A AS G
Sbjct: 133 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 192
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L G +H V G Q VG LV++Y K G IE A + F ++++++VV+W+++
Sbjct: 193 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAA 252
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
A++ + +R +M G+APN TF+ VL AC+ L +G+ + G E
Sbjct: 253 YARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLE 312
Query: 331 EAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
YV V++ + G L A ++ +W +L+ H E ER
Sbjct: 313 SDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQTEKALELFER 371
Query: 389 I 389
+
Sbjct: 372 M 372
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ N ++ + L+D+Y + D+ DDA +F ++SKN SW ++A A + ++
Sbjct: 3 ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML +G P S +A + G+ + ++ +G + + V LV +Y
Sbjct: 63 FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G DA VF R+ RDVV+W++M+ A++G + + F +M +G+APN+VT +
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L AC+ G L G ++ G++ V+L G+ G ++ A + ++ +E
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI-VEK 241
Query: 362 TAAVWGALLGA 372
W A+ A
Sbjct: 242 NVVAWSAISAA 252
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/606 (39%), Positives = 353/606 (58%), Gaps = 43/606 (7%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFK----NDIAMQNTILNAYAKCGCLDEARKLFDE-MPV 55
+C +++ + A I+ S N IA++ + + G L + +F+ +
Sbjct: 30 RCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVK--FIGVSSSHGNLRHSVLIFNHFLSF 87
Query: 56 KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN--QFTLSSVLKASGAGATDDKFG 113
++ + AL+ +SQ++ I F+ L L PN ++T +SVLKA AG G
Sbjct: 88 PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKAC-AGLAQVLEG 146
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM------------------ 145
++VH F KYG + N++V +SL+D+Y + FD+M
Sbjct: 147 QKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFS 206
Query: 146 ---DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG-FEPTHFSYSSV 201
D A +F + KN VSW+ +I+G+AR + A+ F +M EG P + SV
Sbjct: 207 GMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSV 266
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
+A A G+L+ GKW+H + ++ ++ F+GN L DMYAK G + +A+ VF+ + +RDV
Sbjct: 267 LSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDV 326
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
+SW+ ++ G A +G +F +M+ +G+ PN ++F+ +LTAC+HAGL+D+G YF +
Sbjct: 327 ISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDM 386
Query: 322 MKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
M + +G+ P+ HY VDLL RAG LD+A I MP++P VWGALLG CR++K+ E
Sbjct: 387 MPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAE 446
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
G RI ELD + SG + LAN+YAS GRL+DAA R M+++ K P CSW+E
Sbjct: 447 RGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEIN 506
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
N+V+ F D +HPQ I+ RE+ K+K GY P + V+ D++E+E L HSE
Sbjct: 507 NSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSE 566
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
KLALAF LI+T G+TI I KN+RVC DCH A K SK+VEREI+VRD +RFHHF+DG C
Sbjct: 567 KLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKC 626
Query: 561 SCGDYW 566
SC DYW
Sbjct: 627 SCNDYW 632
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 345/567 (60%), Gaps = 24/567 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + VH+ + S F+ I NT+L+ Y+KCG LD A ++F++M +++V+W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY+++ + + AI L QM + G+K + +S+L A + D G+ VH +
Sbjct: 321 TSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDN-GKDVHDYIK 379
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N++V ++L+DMY + MD A +F+ + K+ +SWN +I GE
Sbjct: 380 ANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI--------GE---- 427
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+P + + + A AS +LE+GK +H +++++G V N LVD+Y
Sbjct: 428 ---------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +F+ + +D+VSW M++G HG G + F +M GI P++V+F+
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL++G +F +MK +EP+ HY VDLL R G L +A +FI +PI
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA 598
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR++ ++EL AER+FEL+P ++G ++LLANIYA A + + R R
Sbjct: 599 PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMR 658
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVA-NDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+ + + G++K P CSW+E K V++FV+ N+ +HP I +++ K+K+ GY P +
Sbjct: 659 EKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKT 718
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L AD+ ++E L HSEKLA+AF L++ PP T+ + KN+RVCGDCH KF SK
Sbjct: 719 KYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKE 778
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFHHF++G+CSC +W
Sbjct: 779 TRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 52/370 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + + VH+ I + D + +++ YA CG L E R++FD M K++ W
Sbjct: 109 CAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLW 168
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++S Y++ + +I LF M+ G++ + +S L
Sbjct: 169 NFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL--------------------- 207
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
FD++ D ++ +SWN++I+G+ E+ L
Sbjct: 208 --------------------FDKLCD----------RDVISWNSMISGYVSNGLTERGLE 237
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M+ G + + SV A++G+L GK VH+ IKS + NTL+DMY+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYS 297
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF ++ +R+VVSW SM+ G + G +R ++M + G+ + V
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTS 357
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ +G LD G+ +K + +E +D+ + G +D A M ++
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417
Query: 362 TAAVWGALLG 371
+ W ++G
Sbjct: 418 IIS-WNTMIG 426
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 54/228 (23%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKS---------GGQLVA----------------- 230
+YSSV A + SL GK VH+ +IKS G +LV+
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHS-IIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDT 159
Query: 231 ------FVGNTLVDMYAKSGSI--------------------EDAEKVFNRLLKRDVVSW 264
++ N +V YAK G E A ++F++L RDV+SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISW 219
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
NSM++G +GL + + +++M+ GI + T + VL C+++G L G+ +L K
Sbjct: 220 NSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E T +D+ + G LD AL+ +M E W +++
Sbjct: 280 STFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 326
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/543 (41%), Positives = 331/543 (60%), Gaps = 5/543 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DIA N +++ Y + G +D+A KLF +MP K++++WT +I G QN++ A+ LF ML
Sbjct: 158 DIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNML 217
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R +K T + V+ A A A G QVH F +K G+ + YV +SL+ +YA +
Sbjct: 218 RCCIKSTSRTFTCVITAC-ANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRT 276
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+D+ +F + + W AL++G++ + E AL FSEM+R P +++S +
Sbjct: 277 EDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSC 336
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++ G+L+ GK +H +K G VAFVGN+LV MY+ SG++ DA VF + K+ +VSWN
Sbjct: 337 SALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWN 396
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
S++ GCAQHG GK F +M+R P+++TF +L+ACSH G L +G+ F +
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSG 456
Query: 325 -HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ ++ + HY VD+LGR G L A K I M ++P VW ALL ACRMH +V+ G
Sbjct: 457 LNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
AA IF LD S ++LL+NIYASAGR + ++ R MK+ G+ K+P SWV +
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKK 576
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F + D H R I +K + EK+K++GYVPD L + +++E L HSE+LA
Sbjct: 577 HEFFSGDRPHCLR--IFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLA 634
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LI+T GST+ + KN+RVC DCH+ K S+VV +I++RD RFHHF++G CSCG
Sbjct: 635 IAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCG 694
Query: 564 DYW 566
DYW
Sbjct: 695 DYW 697
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 182/383 (47%), Gaps = 28/383 (7%)
Query: 2 CTHL--KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C HL ++L EAR V + +++ +++ Y + L +A LFDEMP++D+V
Sbjct: 43 CNHLLNRRLDEAREVFDQVPSP----HVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVV 98
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA- 118
+W ++ISG + + A+ +F +M P + +S +G +FG A
Sbjct: 99 SWNSMISGCVECGDIDTAVKMFDEM------PERSVVSWTAMVNGCF----RFGMVDQAE 148
Query: 119 --FC---LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
FC +K WN V Y +F ++DDA LF + KN +SW +I G +
Sbjct: 149 RLFCQMPVKDIAAWNAMVHG-----YLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQN 203
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL F MLR + T +++ V TA A+ + G VH +IKSG +V
Sbjct: 204 ERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVT 263
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+L+ +YA ED+ KVF ++ V W ++L+G + + + + F +M+RN I
Sbjct: 264 ASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSIL 323
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
PNQ TF L +CS G LD G+ + K G+ + V + +G ++ A+
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
E+ + + W +++ C H
Sbjct: 384 FIEI-FKKSIVSWNSIIVGCAQH 405
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 150/264 (56%), Gaps = 4/264 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH I+ S F + + +++ YA C +++RK+F EM + + WTAL+SGYS N +
Sbjct: 247 VHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRK 306
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E+A+ +FS+M+R + PNQ T +S L + A T D +G+++H +K G +VG+
Sbjct: 307 HEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLD-WGKEIHGVAVKLGLGTVAFVGN 365
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ MY+ ++DA +F + K+ VSWN++I G A+ G+ A F +M+R EP
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDMYAKSGSIEDAEK 251
+++ + +A + G L++G+ + ++ + + +VD+ + G +++AEK
Sbjct: 426 DEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEK 485
Query: 252 VFNRL-LKRDVVSWNSMLTGCAQH 274
+ + +K + + W ++L+ C H
Sbjct: 486 LIESMVVKPNEMVWLALLSACRMH 509
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
++ Y +S + DA +F+ + RDVVSWNSM++GC + G V+ F++M +
Sbjct: 72 MISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSV--- 128
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
V++ ++ C G++D+ + F M + A ++ G +D ALK +
Sbjct: 129 -VSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQF----GKVDDALKLFK 183
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELG 382
+MP W ++ C + +N G
Sbjct: 184 QMP-RKNVISWTTMI--CGLDQNERSG 207
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/597 (38%), Positives = 341/597 (57%), Gaps = 33/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L+ V I + + M N +++ Y KCG +D+ARK+FDE K++V +
Sbjct: 250 CAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLY 309
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++S Y + + + +ML+ G +P++ T+ S + A + D G+ H + L
Sbjct: 310 NTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSAC-SELDDVSCGKWCHGYVL 368
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
+ G + V +++++MY + FD+M + AW
Sbjct: 369 RNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWK 428
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F+A+ + VSWN +I ++S ++A+ F M EG + V +A G+
Sbjct: 429 IFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGA 488
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L+ KW+H ++ K +G LVDM+A+ G + A +VFN+++KRDV +W + +
Sbjct: 489 LDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGA 548
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEP 329
A G G + F++ML+ GI P+ V F+ +LTA SH GL+++G F MK +G+ P
Sbjct: 549 MAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAP 608
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+ HY VDLLGRAGLL AL I M +EP +WG+LL ACR+HKNV++ AYAAERI
Sbjct: 609 QAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERI 668
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
ELDP +G H+LL+NIYASAGR +D A+ R +KE G K P S +E + F
Sbjct: 669 SELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTG 728
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D++HP+ I +EI +++ IGYVPD ++VL +++E+E L HSEKLA+AFALI
Sbjct: 729 DESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALI 788
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
ST G I + KN+R+C DCHS K SK REIIVRD NRFH F+ GFCSCGDYW
Sbjct: 789 STGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 201/402 (50%), Gaps = 17/402 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD------EARKLF--DE 52
KC + +LK+ +H+ I + + ++++ + G + +A +LF D
Sbjct: 42 KCKTMTELKQ---LHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDN 98
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
+ +++LI G+S AI++F Q++ +G P+ FT VL A A +
Sbjct: 99 GIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTE- 157
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G QVH +K G++ +++V +SL+ Y ++D +F + +N VSW +LI G+A+
Sbjct: 158 GFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAK 217
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ ++A+ F EM+ G P + V +A A L+ G+ V + + ++ A +
Sbjct: 218 RGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALM 277
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N LVDMY K G+I+ A K+F+ + +++V +N++++ + GL + + +ML++G
Sbjct: 278 VNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP 337
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+++T L ++ACS + G+ + ++G+E + +++ + G + A +
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACR 397
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
M + T W +L+ + ++E +A +IF P
Sbjct: 398 VFDRM-LNKTRVSWNSLIAGFVRNGDME----SAWKIFSAMP 434
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/544 (41%), Positives = 331/544 (60%), Gaps = 14/544 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ NT+++ YA+ G L +AR+LF+E PV+D+ TWTA++ Y Q+ + A +F +M
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM- 276
Query: 86 RLGLKPNQFTLS-SVLKASGAGATDDKFGRQV-HAFCLKYGYDWNVYVGSSLLDMYARFD 143
P + +S +V+ A A GR++ WN+ + Y +
Sbjct: 277 -----PQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG-----YCQNG 326
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ A LF + ++ VSW A+IAG+A+ E+A+ EM R+G ++ +
Sbjct: 327 DLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALS 386
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A A +LE GK VH V+++G + VGN LV MY K G I++A VF + +D+VS
Sbjct: 387 ACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVS 446
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+ML G A+HG G+ + FE M+ G+ P+++T + VL+ACSH GL D G YF M
Sbjct: 447 WNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMN 506
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +G+ P HY +DLLGRAG L+ A IR MP EP AA WGALLGA R+H N+ELG
Sbjct: 507 KDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELG 566
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AAE +F+++PH+SG ++LL+N+YA++GR D ++ R M++ GV+K P SWVE +N
Sbjct: 567 EQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNK 626
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+H F D HP++ I+ E+ K+K GYV + VL +++E++ L+ HSEKL
Sbjct: 627 IHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKL 686
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF +++ P G I + KN+RVC DCH+A K SK+V R IIVRD++R+HHF +G CSC
Sbjct: 687 AVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSC 746
Query: 563 GDYW 566
DYW
Sbjct: 747 RDYW 750
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 170/349 (48%), Gaps = 34/349 (9%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ N +L YA+ L +AR LFD MP KD+V+W A++SGY ++ + A +F +M
Sbjct: 94 DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM- 152
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL-KYGYDWNVYVGSSLLDMYARFDQ 144
P++ ++S +G A + GR A L + DW + + L+ Y + +
Sbjct: 153 -----PHKNSIS----WNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNM 203
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFT 203
+ DA LF + ++ +SWN +I+G+A+ + +A R F E +R+ F T Y+ V
Sbjct: 204 LGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQD 263
Query: 204 ALASTG-----SLEQGKWVHAHVIKSGG-------------QLVAF--VG--NTLVDMYA 241
+ + Q + + +V+ +G + + F +G N ++ Y
Sbjct: 264 GMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYC 323
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
++G + A +F+ + +RD VSW +++ G AQ+GL + + +M R+G + N+ TF C
Sbjct: 324 QNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCC 383
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
L+AC+ L+ G+ + + G E V + + G +D A
Sbjct: 384 ALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEA 432
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 64/396 (16%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
++ + + G D A +FD MP+++ V++ A+ISGY +N + A LF +M L
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL---- 95
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
+ WN+ +L YAR ++ DA LF
Sbjct: 96 -------------------------------FSWNL-----MLTGYARNRRLRDARMLFD 119
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
++ K+ VSWNA+++G+ R ++A F M + S++ + A +G LE+
Sbjct: 120 SMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEE 175
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
+ + KS +L++ N L+ Y K + DA ++F+++ RD++SWN+M++G AQ
Sbjct: 176 ARRLFES--KSDWELISC--NCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQ 231
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
G R FE+ + T+ ++ A G+LDE + F M + E
Sbjct: 232 DGDLSQARRLFEE----SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP----QKREMS 283
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVELGAYAAERIFEL 392
Y + + +D + EMP P W ++ G C +N +L A +F++
Sbjct: 284 YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYC---QNGDLA--QARNLFDM 337
Query: 393 DPH-DSGPHILLANIYASAGRLNDAARARKMMKESG 427
P DS + YA G +A MK G
Sbjct: 338 MPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VH ++ + ++ + N ++ Y KCGC+DEA +F + KD+V+W
Sbjct: 388 CADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSW 447
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++GY+++ A+ +F M+ G+KP++ T+ VL A D+ H+
Sbjct: 448 NTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNK 507
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG N + ++D+ R +++A L + + +W AL+ H GE
Sbjct: 508 DYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGE 567
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV 217
+A +M EP ++S L S G+WV
Sbjct: 568 QAAEMVFKM-----EP----HNSGMYVLLSNLYAASGRWV 598
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/568 (39%), Positives = 342/568 (60%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ R + ILG+ + + +Q +++ Y K G +A +F M +D+V W
Sbjct: 71 CTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAW 130
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+++ Y++N P A+ LF QM G+ PN+ TL S L A A D + G +H
Sbjct: 131 SAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDAC-ASLGDLRSGALMHQRVE 189
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G V VG++L+++Y + +++ A F + KN V+W+A+ A +AR A+R
Sbjct: 190 AQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIR 249
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--FVGNTLVDM 239
M EG P ++ SV A A+ +L+QG+ +H GG L + +V LV+M
Sbjct: 250 VLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNM 309
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G++ A +F+++ D+V WNS++ AQHG + + FE+M G+ P +TF
Sbjct: 310 YSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITF 369
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL ACSHAG+LD+G+ +F + + HG+ PE H+ VDLLGRAG + + + MP
Sbjct: 370 TSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMP 429
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
EP W A LGACR ++N++ +AAE +F+LDP P++LL+N+YA AGR +D AR
Sbjct: 430 FEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVAR 489
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ M+ KE SW+E K+ VH F++ D HP+ IH + + +++ +K+ GYVPD
Sbjct: 490 MRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPD 549
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ VL Q+ +E + HSEKLA+AFAL++TP GS I + KN+RVC DCH+A KF SK
Sbjct: 550 TEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISK 609
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V REI+VRD NRFH F++G CSCGDYW
Sbjct: 610 LVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 172/359 (47%), Gaps = 4/359 (1%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L+AY++ G + RK FDEMPV D+V+W ALI+ Y N + + F ML G+ P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+ +S L A A + GR + L G + V ++L+ MY + DA +F
Sbjct: 61 EVGISIFLSAC-TDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ ++ V+W+A++A +AR +AL F +M +G P + S A AS G L
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
G +H V G Q VG LV++Y K G IE A + F ++++++VV+W+++ A
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
++ + +R +M G+ PN TF+ VL AC+ L +G+ + G E
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299
Query: 333 HYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
YV V++ + G L A ++ +W +L+ H E ER+
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTEKALELFERM 357
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 345/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ V + +K+D+ + +++L+ YA+ G + +A K+F MP +D VTW
Sbjct: 118 CARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTW 177
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +++G+ QP +AI ++ +M G+K ++ + V++A A A + + G VH L
Sbjct: 178 STMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTA-ARNVRMGASVHGHLL 236
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G +V +SL+DMYA+ +D A +F + +N+VSW+A+I+G A+ + ++ALR
Sbjct: 237 RHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALR 296
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P + S A ++ G L+ G+ VH +++ +G +DMY+
Sbjct: 297 LFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRF-DFNCILGTAAIDMYS 355
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A+ +FN + RD++ WN+M+ C HG G+ + F++M G+ P+ TF
Sbjct: 356 KCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFAS 415
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL++EG+ +F M H + P E HYV VDLL R+GL++ A + M E
Sbjct: 416 LLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAE 475
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT A+W ALL C +K +ELG A+ I EL P D G L++N+YA+ + + + R
Sbjct: 476 PTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVR 535
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SG KK P CS +E + H+FV D +HPQR I K ++ +++++GY+P +
Sbjct: 536 KLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTE 595
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V +++ +E +L HSE+LA+AF L++T PG+ + I KN+RVCGDCH A K+ SK+
Sbjct: 596 FVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIA 655
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD RFHHF+DG CSC DYW
Sbjct: 656 DREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
H+R+ ALR F L P +++ +A A G L G+ V +G +
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV ++L+ +YA+ G++ DA KVF R+ +RD V+W++M+ G G ++ + +M
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ ++V + V+ AC+ A + G + +HG+ + + VD+ + GLLD
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 350 ALKFIREMPIEPTAAVWGALL 370
A + M + W A++
Sbjct: 263 ACRVFGLM-VHRNDVSWSAMI 282
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 348/598 (58%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + +HA ++ S D + + ++ YAKCGC EAR++F + ++ V+W
Sbjct: 304 CAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSW 363
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI G+ Q ++ LF+QM + +QF L++++ + D RQ+H+ L
Sbjct: 364 TVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGC-SNRMDMCLARQLHSLSL 422
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE------------------------- 156
K G+ V + +SL+ MYA+ + +A +F+++E
Sbjct: 423 KSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKARE 482
Query: 157 ------SKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTG 209
++N ++WNA++ + + E L+ +S ML E P +Y ++F A G
Sbjct: 483 FFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMG 542
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + H +K G L V N ++ MY+K G I +A K+F+ L ++D+VSWN+M+T
Sbjct: 543 ANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMIT 602
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ ML+ G P+ ++++ VL++CSH+GL+ EG+ YF ++K+ H V
Sbjct: 603 GYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVS 662
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLL RAG L A I EMP++PTA VWGALL AC+ H N EL AA+
Sbjct: 663 PGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKH 722
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+F+LD DSG ++LLA IYA AG+ D+A+ RK+M++ G+KK P SW+E KN VH+F A
Sbjct: 723 LFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKA 782
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HPQ I +K E+ EKI Q+GYV S +++ HSEKLA+AF +
Sbjct: 783 EDVSHPQVIAIREKLDELMEKIAQLGYVRTES----------LRSEIH-HSEKLAVAFGI 831
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ P IHI KN+R+CGDCH+ K S V RE ++RD RFHHF+ G CSCGDYW
Sbjct: 832 MNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 175/392 (44%), Gaps = 34/392 (8%)
Query: 20 GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAII 79
G + ++ N ++N YAK G L +A +LF MP +D+ +W L+SGY Q+ + +A+
Sbjct: 88 GDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAME 147
Query: 80 LFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDM 138
F M R G PN FT +K+ GA + Q+ K+G+ + V + ++DM
Sbjct: 148 SFVSMRRSGDSLPNAFTFGCAMKSCGALGWHE-VALQLLGLLTKFGFQGDPDVATGIVDM 206
Query: 139 YAR----------FDQM---------------------DDAWFLFTALESKNEVSWNALI 167
+ R F Q+ D A LF ++ ++ VSWN ++
Sbjct: 207 FVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMV 266
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
+ ++ +AL +M G +Y+S TA A SL GK +HA VI+S
Sbjct: 267 SALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPC 326
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
+ +V + +V++YAK G ++A +VF+ L R+ VSW ++ G Q+G ++ F +M
Sbjct: 327 IDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQM 386
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+ +Q +++ CS+ + + +L K G + + + + G L
Sbjct: 387 RAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNL 446
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
A M E W +L A N+
Sbjct: 447 QNAESIFSSME-ERDIVSWTGMLTAYSQVGNI 477
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 5/197 (2%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N +++ YAK GS+ DAE++F R+ +RDV SWN++++G Q G + F M R+G +
Sbjct: 99 NIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS 158
Query: 294 -PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN TF C + +C G + L+ K G + + VD+ R G +D A K
Sbjct: 159 LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASK 218
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
++ PT ++L V+ +A E + D ++ + + +GR
Sbjct: 219 QFSQIE-RPTVFCRNSMLAGYAKSYGVD---HALELFESMPERDVVSWNMMVSALSQSGR 274
Query: 413 LNDAARARKMMKESGVK 429
+A M GV+
Sbjct: 275 AREALSVAVDMHNRGVR 291
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/570 (40%), Positives = 349/570 (61%), Gaps = 7/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + H + D+++ NT+L YA+ L E +K+F M +D V+W
Sbjct: 214 CASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSW 273
Query: 62 TALISGYSQNDQP-ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+I + + AI +F +M+R G PN+ T ++L A+ + + K Q+HA
Sbjct: 274 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLL-ATVSSLSTSKLSHQIHALI 332
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
LKY + + ++LL Y + +M++ +F+ + E ++EVSWN++I+G+ KA
Sbjct: 333 LKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKA 392
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M++ G F++++V +A A+ +LE G VHA I++ + +G+ LVDM
Sbjct: 393 MDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDM 452
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G I+ A + FN + R++ SWNSM++G A+HG G +R F +M +G P+ +TF
Sbjct: 453 YSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITF 512
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACSH GL+DEG YF M + +G+ P HY VDLLGRAG LD+ FI +MP
Sbjct: 513 VGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMP 572
Query: 359 IEPTAAVWGALLGAC--RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
I+P +W +LGAC + ELG AAE +F +DP ++ ++LL+N+YAS G+ D
Sbjct: 573 IKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDM 632
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
AR R+ M+E+ VKKE CSWV K+ VH+FVA D++HP++ +I+ K +E+ +KI+ GYV
Sbjct: 633 ARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYV 692
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P L + + +E L HSEKLA+AF L + G I I KN+RVCGDCHSAFK+
Sbjct: 693 PQIKFALYDLEPENKEELLSYHSEKLAVAFVL-TRNSGLPIRIMKNLRVCGDCHSAFKYI 751
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SKVV+R I++RD+NRFHHF DG CSC DYW
Sbjct: 752 SKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 199/363 (54%), Gaps = 2/363 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
+A + H ++L F +D+ + NT++N Y + G ARKLFDEMP ++ VTW LISGY+
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWN 128
QN PE+A + +M+ G PN+F S ++A + GRQVH + ++ G D
Sbjct: 78 QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK 137
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V VG+ L++MYA+ +D A +F + K+ VSWN++I G + E A+++++ M +
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P++F+ S ++ AS G + G+ H IK G + V NTL+ +YA++ + +
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA-TVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+KVF+ +L+RD VSWN+++ A G + + F +M+R G +PN+VTF+ +L S
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVS 317
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
AL+ K+ V+ + A + G++G ++ + M W
Sbjct: 318 SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 377
Query: 368 ALL 370
+++
Sbjct: 378 SMI 380
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 342/565 (60%), Gaps = 3/565 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + L R VH ++ A +++ + N++L+ Y+KC CLDE +KLF EM +D V++
Sbjct: 252 TGVGDLCLGRQVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYN 310
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+I+GY+ N + LF +M L +S+L +G+ G+Q+HA +
Sbjct: 311 VMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGS-VPHIGIGKQIHAQLVL 369
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G VG++L+DMY++ +D A F K VSW A+I G + + E+AL+
Sbjct: 370 LGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQL 429
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F M R G P ++SS A ++ + G+ +H+++I+SG F G+ L+DMY K
Sbjct: 430 FCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTK 489
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +++A + F+ + +R+ +SWN++++ A +G K ++ FE ML G P+ VTFL V
Sbjct: 490 CGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSV 549
Query: 303 LTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L+ACSH GL +E YF LM+ ++G+ P + HY +D LGR G D+ + + EMP E
Sbjct: 550 LSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFED 609
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+W ++L +CR H N +L AAE++F + D+ P+++L+NI+A AG+ DAA +K
Sbjct: 610 DPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKK 669
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+M++ G++KE SWVE K+ V+ F +ND +P I + + +++ + GY PD+S
Sbjct: 670 IMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSC 729
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
L D + L+ HSE+LA+AFALI+TPPG+ I + KN+ C DCHSA K SK+V
Sbjct: 730 TLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVN 789
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+IIVRD++RFHHF+DGFCSCGDYW
Sbjct: 790 RDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 3/348 (0%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+++ + NT+L+AY K G L AR++F EMP +D VT+ A++ G S+ A+ LF+ M
Sbjct: 173 SNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAM 232
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
R GL +FT S+VL + G D GRQVH + NV+V +SLLD Y++ D
Sbjct: 233 RRKGLAATRFTFSTVLTVA-TGVGDLCLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDC 290
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D+ LF + ++ VS+N +IAG+A LR F EM F+ Y+S+ +
Sbjct: 291 LDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSV 350
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
S + GK +HA ++ G VGN L+DMY+K G ++ A+ F + VSW
Sbjct: 351 AGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSW 410
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+M+TGC Q+G + ++ F M R G++P++ TF + A S+ ++ G+ + + +
Sbjct: 411 TAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIR 470
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G +D+ + G LD AL+ EMP E + W A++ A
Sbjct: 471 SGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNAVISA 517
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 31/295 (10%)
Query: 80 LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR--QVHAFCLKYGYDWNVYVGSSLLD 137
L ++M++ G P + L+ +L + + GR Q A + + N + + +L
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISS------GRLAQARALFDQMPHRNNAFSLNRMLS 74
Query: 138 MYARFDQMDDAWFLFTALES--KNEVSWNALIAGHARK--SEGEKALRTFSEMLREGFEP 193
Y+R Q+ A LF + ++ V+W +I A + A+ F +MLREG P
Sbjct: 75 GYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAP 134
Query: 194 THFSYSSVFTALASTGSLEQGKWV---HAHVIKSG---GQLVAFVGNTLVDMYAKSGSIE 247
+ ++V ++G + H +K G +V V NTL+D Y K G +
Sbjct: 135 DRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVV--VCNTLLDAYCKHGLLA 192
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +VF + RD V++N+M+ GC++ G + F M R G+A + TF VLT +
Sbjct: 193 AARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVAT 252
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFV-----DLLGRAGLLDRALKFIREM 357
G L G+ + HG+ FV D + LD K EM
Sbjct: 253 GVGDLCLGR------QVHGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM 301
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+ M++ GF+P + + + +L S+G L Q + + + AF N ++ Y++S
Sbjct: 23 ARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNN---AFSLNRMLSGYSRS 79
Query: 244 GSIEDAEKVF--NRLLKRDVVSWNSMLTGCAQHGLGKAT--VRWFEKMLRNGIAPNQVTF 299
G + A +F + RD V+W M+ A +A+ V F MLR G+AP++VT
Sbjct: 80 GQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTV 139
Query: 300 LCVL-----TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
VL + + A ++ FAL K + T +D + GLL A +
Sbjct: 140 ATVLNLPPASGGTAAAIIIASLHPFAL-KLGLLHSNVVVCNTLLDAYCKHGLLAAARRVF 198
Query: 355 REMPIEPTAAVWGALLGACRMHKNVE-LGAYAAER 388
+EMP + ++G + + E L +AA R
Sbjct: 199 QEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 340/567 (59%), Gaps = 4/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + LK + +H ++LG NDI + + ++ Y+K G ++ AR +F +MP +++V+W
Sbjct: 241 CGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSW 300
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISG +N + LF +++R + T+ S+L+ A+ G+ +H C
Sbjct: 301 NAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLAT-GKILHG-CA 358
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++ N+ + ++++D+Y++ + A F+F ++ +N ++W A++ G A+ E ALR
Sbjct: 359 IRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALR 418
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M EG ++ S+ + A GSL++G+ +H H+ + G LVDMYA
Sbjct: 419 LFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYA 478
Query: 242 KSGSIEDAEKVFNR-LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G I AE++F+ + +DVV WNSM+TG HG G V + KM+ G+ PNQ TFL
Sbjct: 479 KCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFL 538
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L+ACSH+ L+++G F M++ H + P E HY VDLL RAG + A I +MP
Sbjct: 539 SLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPF 598
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P AV ALL CR HKN+ LG ++++ LD + G +I+L+NIYA A R +
Sbjct: 599 QPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYI 658
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R +M+ G+KK P S VET N VH F A D++HP I+ + ++ GYVPD+
Sbjct: 659 RGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDT 718
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL D++ + L HSE+LA+AF L++TP GS I I KN+RVCGDCH+ K+ SK+
Sbjct: 719 SCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKI 778
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REIIVRD NRFHHF +G CSCGDYW
Sbjct: 779 VKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 184/368 (50%), Gaps = 9/368 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K L + HA I+ ++ D + ++ AY+ L+ AR +FD+ + A++
Sbjct: 43 KNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAML 102
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GY Q+ + + LF M L+ + + + LKA A + D + G ++ + ++ G
Sbjct: 103 CGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKAC-ASSLDYEMGMEIISSAVEKGM 161
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ N +VGSS++ +F ++ +A +F + +K+ V WN++I G+ + + A + F E
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFE 221
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M G +P+ + +S+ A G+L+ GK +H +V+ G V + VDMY+K G
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
IE A VF ++ R++VSWN+M++GC ++GL + F +++R+ + T + +L
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYV---TFVDLLGRAGLLDRALKFIREMPIEPT 362
CS L G+ ++ + E++ + VDL + G L +A M +
Sbjct: 342 CSQTASLATGK----ILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMK-DRN 396
Query: 363 AAVWGALL 370
W A+L
Sbjct: 397 VITWTAML 404
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 355/598 (59%), Gaps = 34/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCL------------------ 43
C + L+ R VHAH S F + + N +L+ YAKCG L
Sbjct: 97 CVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSW 156
Query: 44 -------------DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
++ARKLFDEMP +D +W A ISGY ++QP A+ LF M R
Sbjct: 157 NTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERS 216
Query: 91 P-NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
N+FTLSS L AS A + G+++H + ++ + + V S+LLD+Y + +D+A
Sbjct: 217 SSNKFTLSSALAASAAIPCL-RLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEAR 275
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F ++ ++ VSW +I E+ F ++++ G P ++++ V A A
Sbjct: 276 GIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHA 335
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ GK VH +++ +G +F + LV MY+K G+ A +VFN + + D+VSW S++
Sbjct: 336 AEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
G AQ+G + +FE +L++G P+QVT++ VL+AC+HAGL+D+G YF ++ +KHG+
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 455
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
HY +DLL R+G A I MP++P +W +LLG CR+H N+EL AA+
Sbjct: 456 HTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKA 515
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
++E++P + +I LANIYA+AG ++ A RK M G+ K+P SW+E K VH+F+
Sbjct: 516 LYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLV 575
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HP+ + IH+ E+S+KIK+ GYVPD++ VL +++++E L HSEKLA+ F +
Sbjct: 576 GDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGI 635
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
ISTPPG+ I + KN+R C DCH+A K+ SK+V+R+I VRD+NRFH F DG CSC DYW
Sbjct: 636 ISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 177 EKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+K ++ E+L R P+ YS++ A +LE G+ VHAH S F+ N
Sbjct: 68 QKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNR 127
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
L+DMYAK GS+ DA+ +F+ + RD+ SWN+M+ G A+ G + + F++M
Sbjct: 128 LLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM 179
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 339/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L A V + + D+ + + +L+ Y++CG + +A ++FD MP KD V W
Sbjct: 121 CARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +++G+ +P A+ ++S+M G+ ++ + V++A + + G VH L
Sbjct: 181 STMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTG-NTRMGASVHGRFL 239
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G +V + +SL+DMYA+ D A +F + +N VSWNALI+G A+ ++AL
Sbjct: 240 RHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALD 299
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G +P + S A A G L+ GK +H +++ + +G ++DMY+
Sbjct: 300 LFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRL-EFQCILGTAVLDMYS 358
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E A K+FN+L RD+V WN+M+ C HG G + F+++ GI P+ TF
Sbjct: 359 KCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFAS 418
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL++EG+ +F ++ + G+EP E H V VDLL R+GL++ A + + M E
Sbjct: 419 LLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTE 478
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT +W ALL C +K +ELG A++I E P D G L++N+YA+A + + R
Sbjct: 479 PTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIR 538
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SG KK P S +E H FV D +HPQ I K ++S +++++GYVP +
Sbjct: 539 KLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTE 598
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V D+ +E L HSE+LA+AF L++T PG+ + I KN+RVCGDCH A K+ SK+V
Sbjct: 599 FVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIV 658
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD RFHHF+DG CSCGDYW
Sbjct: 659 DREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEV--SWNALIAGHARKSEGEKALRTFSEMLREGF 191
SL YAR +D A A S +WNAL+A +R ALR F L
Sbjct: 49 SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVF-RALPSSA 107
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P +++ TA A G L+ + V +G FV + L+ +Y++ G++ DA +
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF+ + ++D V+W++M+ G G + + +M +G+A ++V + V+ AC+ G
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G +HG+ + + VD+ + G D A + R MP A W AL+
Sbjct: 228 TRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYR-NAVSWNALI 285
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 352/582 (60%), Gaps = 20/582 (3%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+HL+ L+ + +HA+ L GS +N + + +++ Y C + ++FD M + +
Sbjct: 308 CSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGCRVFDGMFDRKIG 366
Query: 60 TWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKAS-GAGATDDKFGRQVH 117
W A+I+GY+QN+ E A++LF +M GL N T++ V+ A +GA K +H
Sbjct: 367 LWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK--EAIH 424
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
F +K G D + +V ++L+DMY+R ++D A +F +E ++ V+WN +I G+ E
Sbjct: 425 GFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHE 484
Query: 178 KALRTFSEML-----------REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
AL +M R +P + ++ + A+ +L +GK +HA+ IK+
Sbjct: 485 DALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 544
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
VG+ LVDMYAK G ++ + KVF+++ R+V++WN ++ HG + +
Sbjct: 545 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRM 604
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAG 345
M+ G+ PN+VTF+ V ACSH+G+++EG F MKK +GVEP HY VDLLGRAG
Sbjct: 605 MMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAG 664
Query: 346 LLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
+ A + I +P A W +LLGACR+H N+E+G AA+ + +L+P+ + ++LLA
Sbjct: 665 RVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 724
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
NIY+SAG A R+ MK GV+KEP CSW+E + VH FVA D +HPQ +
Sbjct: 725 NIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLE 784
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
+ E++++ GY+PD+S VL ++ E+E L HSEKLA+AF +++T PG+ I + KN+R
Sbjct: 785 TLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 844
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
VC DCH A KF SKVV+REII+RD RFHHF++G CSCGDYW
Sbjct: 845 VCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 184/358 (51%), Gaps = 6/358 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKND-IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L+ + + +HAH+ + D + + NT++N Y KCG K+FD + ++ V+W +
Sbjct: 106 LQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 165
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCL 121
LIS ++ E A+ F ML ++P+ FTL SV A + G+QVHA+ L
Sbjct: 166 LISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGL 225
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + N ++ ++L+ MY + ++ + L + E ++ V+WN +++ + + +AL
Sbjct: 226 RKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALE 284
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
EM+ EG EP F+ SSV A + L GK +HA+ +K+G +FVG+ LVDMY
Sbjct: 285 YLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 344
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTF 299
+ +VF+ + R + WN+M+TG AQ+ + + F +M + G+ N T
Sbjct: 345 CNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTM 404
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
V+ AC +G + + + K G++ + +D+ R G +D A + +M
Sbjct: 405 AGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKM 462
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 144/270 (53%), Gaps = 6/270 (2%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+ +++ A++ + M+ LG+KP+ F ++LKA A D G+Q+HA
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAV-ADLQDMDLGKQIHAHV 119
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K+GY + V V ++L+++Y + + +F + +N+VSWN+LI+ + E A
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALAS---TGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
L F ML E EP+ F+ SV A ++ L GK VHA+ ++ G +L +F+ NTL
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTL 238
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V MY K G + ++ + RD+V+WN++L+ Q+ + + +M+ G+ P+
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
T VL ACSH +L G+ A K+G
Sbjct: 299 FTISSVLPACSHLEMLRTGKELHAYALKNG 328
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 345/567 (60%), Gaps = 24/567 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + VH+ + S+F+ I NT+L+ Y+KCG LD A ++F++M +++V+W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY+++ + + AI L QM + G+K + ++S+L A + D G+ VH +
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN-GKDVHDYIK 379
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N++V ++L+DMYA+ M+ A +F+ + K+ +SWN +I GE
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------GE---- 427
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+P + + V A AS +LE+GK +H +++++G V N LVD+Y
Sbjct: 428 ---------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +F+ + +D+VSW M+ G HG G + F +M GI P++V+F+
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL++G +F +MK +EP+ HY VDLL R G L +A +FI +PI
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA 598
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR + ++EL AER+FEL+P +SG ++LLANIYA A + + R R
Sbjct: 599 PDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLR 658
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVA-NDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+ + + G++K P CSW+E K V++FV+ N+ +HP I +++ K+K+ G+ P +
Sbjct: 659 EKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKT 718
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L AD+ ++E L HSEKLA+AF L++ PP TI + KN+RVCGDCH KF SK
Sbjct: 719 KYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKE 778
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD NRFHHF+DG+CSC +W
Sbjct: 779 TRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 162/370 (43%), Gaps = 52/370 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK + + VH+ I ++ D A+ +++ YA CG L E R++FD M K++ W
Sbjct: 109 CAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLW 168
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ S+ ++G L ++ G
Sbjct: 169 N----------------FMVSEYAKIGDFKESICLFKIMVEKGIEGK------------- 199
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + A+ LF L ++ +SWN++I+G+ E+ L
Sbjct: 200 ----------------------RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M+ G + + SV A++G+L GK VH+ IKS + NTL+DMY+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 297
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF ++ +R+VVSW SM+ G + G ++ ++M + G+ + V
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITS 357
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ +G LD G+ +K + +E +D+ + G ++ A M ++
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKD 417
Query: 362 TAAVWGALLG 371
+ W ++G
Sbjct: 418 IIS-WNTMIG 426
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 52/227 (22%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+YSSV A S GK VH+ + + + +G LV YA G +++ +VF+ +
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 257 LKRDVVS---------------------------------------------------WN 265
K++V WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
SM++G +GL + + +++M+ GI + T + VL C+++G L G+ +L K
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E T +D+ + G LD AL+ +M E W +++
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 326
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 320/544 (58%), Gaps = 2/544 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ N + Y K G L ARKLFDEMP +++ TW A+++G + E ++ F
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G+ P++F L SV + AG D GRQVHA+ ++ G D ++ VGSSL MY R
Sbjct: 164 MRREGMHPDEFGLGSVFRCC-AGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 222
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ + + L S + VS N +IAG + + E AL F M G ++ S +
Sbjct: 223 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 282
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ + +L QG+ +H V+K+G V V LV MY++ G + D+E+VF D
Sbjct: 283 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 342
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++M++ HG G+ + F++M+ G P+ VTFL +L ACSH+GL +EG F LM
Sbjct: 343 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 402
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +G++P HY VDLLGR+G LD A I MP+ P +W LL AC+ KN ++
Sbjct: 403 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 462
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A+R+ ELDPHDS ++LL+NI A++ R D + RK M+++ V+KEP SWVE K
Sbjct: 463 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 522
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+H F D++HP++ I + E+ KI+Q GY PD S VL + +E+E L HSEKL
Sbjct: 523 IHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKL 582
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AFA +S P G I + KN+RVC DCH A K S+V REI+VRD +RFHHF+DG CSC
Sbjct: 583 AIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSC 642
Query: 563 GDYW 566
DYW
Sbjct: 643 RDYW 646
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 3/272 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + R VHA+++ S D+ + +++ + Y +CGCL E + +P +V+
Sbjct: 183 CAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSC 242
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G +QN E A+ F M +G+ + T S + + A + G+Q+H +
Sbjct: 243 NTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQ-GQQIHGQVM 301
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D V V + L+ MY+R + D+ +F + +A+I+ + G+KA+
Sbjct: 302 KAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIE 361
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +M+ G EP+ ++ ++ A + +G E+G + K+ G + T +VD+
Sbjct: 362 LFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLL 421
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+SG +++AE + + L D V W ++L+ C
Sbjct: 422 GRSGCLDEAEALILSMPLTPDGVIWKTLLSAC 453
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/598 (38%), Positives = 341/598 (57%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +HA ++ + D + + ++ YAK GC EA+ +F+ + ++ V W
Sbjct: 300 CARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAW 359
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LISG+ Q ++ LF+QM + +QF L++++ D GRQ+H+ CL
Sbjct: 360 TVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-CSRMDLCLGRQLHSLCL 418
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA--------------WF----------------- 150
K G V V +SL+ MYA+ D + A W
Sbjct: 419 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKARE 478
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALASTG 209
F + KN ++WNA++ + + E LR + ML E + P +Y ++F A G
Sbjct: 479 FFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLG 538
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + +K G + V N ++ MY+K G I +A KVF+ L +D+VSWN+M+T
Sbjct: 539 ANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMIT 598
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ +L+ G P+ ++++ VL+ CSH+GL+ EG+ YF +MK+ H +
Sbjct: 599 GYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNIS 658
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I +MP++PTA VWGALL AC++H N EL AA+
Sbjct: 659 PGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKH 718
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELD DSG ++L+A IYA AG+ +D+A+ RK+M++ G+KK P SW+E N VH+F A
Sbjct: 719 VFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKA 778
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+D +HPQ I KK E+ EKI ++GYV D E HSEKLA+AF L
Sbjct: 779 DDVSHPQVLAIRKKLDELMEKIARLGYVR--------TDSTRSEIH---HSEKLAVAFGL 827
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ P IHI KN+R+CGDCH+ K S V RE ++RD RFHHF G CSCGDYW
Sbjct: 828 MTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 164/309 (53%), Gaps = 6/309 (1%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
+N++L Y K +D A +LFD MP +D+V+W ++S SQ+ + A+ + M G+
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ + T +S L A A + ++G+Q+HA ++ + YV S+L+++YA+ +A
Sbjct: 287 RLDSTTYTSSLTAC-ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 345
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F +L +N V+W LI+G + +++ F++M E F+ +++ + S
Sbjct: 346 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 405
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L G+ +H+ +KSG V N+L+ MYAK +++ AE +F + ++D+VSW SM+T
Sbjct: 406 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 465
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVE 328
+Q G +F+ M N +T+ +L A G ++G + Y ++ + V
Sbjct: 466 AYSQVGNVAKAREFFDGMSEK----NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521
Query: 329 PEEAHYVTF 337
P+ YVT
Sbjct: 522 PDWVTYVTL 530
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 34/386 (8%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N +LN YAK G L +A +LF MP +D+ +W L+SGY Q+ Q ++ F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 86 RLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
R G PN FTL+ +K+ GA Q+ A K+ + V ++L+DM+ R
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWH-SLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 208
Query: 145 MD-------------------------------DAWFLFTALESKNEVSWNALIAGHARK 173
+D A LF ++ ++ VSWN +++ ++
Sbjct: 209 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 268
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL +M +G +Y+S TA A SL GK +HA VI++ + +V
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 328
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ LV++YAKSG ++A+ VFN L R+ V+W +++G Q+G +V F +M +
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+Q +++ C L G+ +L K G + + + + L A
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448
Query: 354 IREMPIEPTAAVWGALLGACRMHKNV 379
R M E W +++ A NV
Sbjct: 449 FRFMN-EKDIVSWTSMITAYSQVGNV 473
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N +++ YAK G + DA ++F R+ RDV SWN++++G Q ++ F M R+G +
Sbjct: 95 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 154
Query: 294 -PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN T C + +C G A+++K + + VD+ R G +D A +
Sbjct: 155 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASR 214
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
+ EPT ++L V+ +A E + D ++ + + +GR
Sbjct: 215 LFVRIK-EPTMFCRNSMLAGYVKTYGVD---HALELFDSMPERDVVSWNMMVSALSQSGR 270
Query: 413 LNDAARARKMMKESGVK 429
+ +A M+ GV+
Sbjct: 271 VREALDMVVDMQSKGVR 287
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 343/585 (58%), Gaps = 37/585 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA +L ++ + + +YA G LD + +F+ ++ +++A+I + Q+
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ A +SQML G++PN FT SSVLK+ + G+ +H +K G ++YV +
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES-----GKVLHCQAIKLGLGSDLYVRT 180
Query: 134 SLLDMYAR----------FDQM---------------------DDAWFLFTALESKNEVS 162
L+D+YAR FD+M D A LF ++ ++ V
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN +I G+A+ ++L+ F ML P + +V +A G+LE G+W+H+++
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
G Q+ VG L+DMY+K GS+EDA VF+R+ +DVV+WNSM+ G A HG + ++
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQ 360
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLL 341
FE+M G P +TF+ +L+AC H GL++EG+ +F LM+ K+G+EP+ HY V+LL
Sbjct: 361 LFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLL 420
Query: 342 GRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI 401
GRAG L+ A ++ M I +WG LLG CR+H N++LG A+ + + +SG ++
Sbjct: 421 GRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV 480
Query: 402 LLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHK 461
LL+N+YA+ G A+ R +MKE G++KE CS +E N VH FVA + HP+ I+
Sbjct: 481 LLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYV 540
Query: 462 KWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKK 521
EI+ +K GY P + VL ++++E L+VHSEKLA+AF LIST PG+T+ I K
Sbjct: 541 MLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVK 600
Query: 522 NIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
N+RVC DCH+ K S++ R+I++RD NRFHHF DG CSCGDYW
Sbjct: 601 NLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 172/357 (48%), Gaps = 37/357 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP------------- 54
L+ +++H + +D+ ++ +++ YA+ G + AR+LFD+MP
Sbjct: 157 LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTC 216
Query: 55 ------------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
+D+V W +I GY+Q+ P ++ LF +ML PN+ T+
Sbjct: 217 YSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276
Query: 97 SSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
+VL A G GA + GR +H++ G NV+VG++L+DMY++ ++DA +F +
Sbjct: 277 LAVLSACGQLGALES--GRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRI 334
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
K+ V+WN++I G+A + AL+ F EM G +PT ++ + +A G +E+G+
Sbjct: 335 RDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGR 394
Query: 216 -WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQ 273
+ K G + +V++ ++G +E+A V N + D V W ++L GC +
Sbjct: 395 SFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL-GCCR 453
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ K L + N T++ + + G + LMK+HG+E E
Sbjct: 454 LHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKE 510
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA L+ G N + L YA ++D + F+F + N S++A+I H +
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
++A +S+ML G EP F++SSV + SLE GK +H IK G +V
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRT 180
Query: 235 TLVDMYAKSGSIEDAEKVFNRLL-------------------------------KRDVVS 263
LVD+YA+ G + A ++F+++ +RDVV
Sbjct: 181 GLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVC 240
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN M+ G AQ G+ +++ F +ML PN+VT L VL+AC G L+ G+ + ++
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
G++ +D+ + G L+ A + + + + W +++ MH
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDA-RLVFDRIRDKDVVAWNSMIVGYAMH 352
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R +H++I + ++ + +++ Y+KCG L++AR +FD + KD+V W
Sbjct: 283 CGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAW 342
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY+ + ++A+ LF +M G KP T +L A G G ++ GR
Sbjct: 343 NSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEE-GRSFFRLMR 401
Query: 122 -KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIA 168
KYG + + ++++ R +++A+ L + + + V W L+
Sbjct: 402 DKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLG 450
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/613 (39%), Positives = 359/613 (58%), Gaps = 49/613 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + VH + L S D+ + N +++ YAKCG ++EA K+F+ M VKD+V+W
Sbjct: 260 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 319
Query: 62 TALISGYSQNDQPENAIILFS-----------------------------------QMLR 86
A+++GYSQ + ++A+ LF QML
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL 379
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-------VYVGSSLLDMY 139
G +PN TL S+L + T G++ H +K+ + + + V ++L+DMY
Sbjct: 380 CGSEPNVVTLVSLLSGCASAGTL-LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMY 438
Query: 140 ARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTH 195
++ A +F + K+ V+W LI G+A+ E +AL FS+ML+ P
Sbjct: 439 SKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNA 498
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ-LVAFVGNTLVDMYAKSGSIEDAEKVFN 254
F+ S A A G+L G+ +HA+V+++ + + FV N L+DMY+KSG ++ A VF+
Sbjct: 499 FTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFD 558
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ +R+ VSW S++TG HG G+ ++ F +M + + P+ VTF+ VL ACSH+G++D+
Sbjct: 559 NMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQ 618
Query: 315 GQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G YF M K GV P HY VDLL RAG LD A++ IR MP++PT AVW ALL AC
Sbjct: 619 GINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSAC 678
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
R++ NVELG YAA ++ EL+ + G + LL+NIYA+A D AR R +MK +G+KK P
Sbjct: 679 RVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPG 738
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
CSWV+ + F A D +HP I+ R++ ++IK +GYVPD+ L D +E+
Sbjct: 739 CSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGD 798
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSEKLALA+ +++T PG+ I I KN+R CGDCHSAF + S ++E EIIVRD++RFH
Sbjct: 799 LLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFH 858
Query: 554 HFRDGFCSCGDYW 566
HF++G CSC YW
Sbjct: 859 HFKNGSCSCRGYW 871
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 209/432 (48%), Gaps = 57/432 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM---PVKDM 58
C + + VHA + S F+ ++ + N +++ Y +CG + AR++FDEM V D+
Sbjct: 155 CGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDL 214
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
V+W ++++ Y Q A+ +F +M LG++P+ +L +VL A + + G+QVH
Sbjct: 215 VSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR-GKQVH 273
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL----------- 166
+ L+ G +V+VG++++DMYA+ M++A +F ++ K+ VSWNA+
Sbjct: 274 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 333
Query: 167 ------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
IAG+A++ G +AL F +ML G EP + S+
Sbjct: 334 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLL 393
Query: 203 TALASTGSLEQGKWVHAHVIK---------SGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ AS G+L GK H H IK G L+ V N L+DMY+K S + A +F
Sbjct: 394 SGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLM--VINALIDMYSKCKSPKAARAMF 451
Query: 254 NRLLKRD--VVSWNSMLTGCAQHGLGKATVRWFEKMLR--NGIAPNQVTFLCVLTACSHA 309
+ + +D VV+W ++ G AQHG + F +ML+ N + PN T C L AC+
Sbjct: 452 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARL 511
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G L G+ A + ++ E +D+ ++G +D A M + W +
Sbjct: 512 GALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGVSWTS 570
Query: 369 LLGACRMHKNVE 380
L+ MH E
Sbjct: 571 LMTGYGMHGRGE 582
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 175/351 (49%), Gaps = 16/351 (4%)
Query: 6 KKLKEARIVHAHILGSAFKND----IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
K L A + H +L +D I+M T N+ AK L R+L P V W
Sbjct: 59 KSLASAELTHQQLLVQGLPHDPTHIISMYLT-FNSPAKA--LSVLRRLH---PSSHTVFW 112
Query: 62 -TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
LI E+ + L+ +M RLG +P+ +T VLKA G + G VHA
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE-IPSFRCGASVHAVV 171
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGE 177
G++WNV+VG+ L+ MY R ++A +F + + + VSWN+++A + + +
Sbjct: 172 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 231
Query: 178 KALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+A++ F M + G P S +V A AS G+ +GK VH + ++SG FVGN +
Sbjct: 232 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 291
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDMYAK G +E+A KVF R+ +DVVSWN+M+TG +Q G + FEK+ I N
Sbjct: 292 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 351
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
VT+ V+ + GL E F M G EP V+ + AG L
Sbjct: 352 VTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTL 402
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/598 (38%), Positives = 341/598 (57%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +HA ++ + D + + ++ YAK GC EA+ +F+ + ++ V W
Sbjct: 280 CARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAW 339
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LISG+ Q ++ LF+QM + +QF L++++ D GRQ+H+ CL
Sbjct: 340 TVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-CSRMDLCLGRQLHSLCL 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA--------------WF----------------- 150
K G V V +SL+ MYA+ D + A W
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKARE 458
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALASTG 209
F + KN ++WNA++ + + E LR + ML E + P +Y ++F A G
Sbjct: 459 FFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLG 518
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + +K G + V N ++ MY+K G I +A KVF+ L +D+VSWN+M+T
Sbjct: 519 ANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMIT 578
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ +L+ G P+ ++++ VL+ CSH+GL+ EG+ YF +MK+ H +
Sbjct: 579 GYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNIS 638
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I +MP++PTA VWGALL AC++H N EL AA+
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKH 698
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FELD DSG ++L+A IYA AG+ +D+A+ RK+M++ G+KK P SW+E N VH+F A
Sbjct: 699 VFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKA 758
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+D +HPQ I KK E+ EKI ++GYV D E HSEKLA+AF L
Sbjct: 759 DDVSHPQVLAIRKKLDELMEKIARLGYVR--------TDSTRSEIH---HSEKLAVAFGL 807
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ P IHI KN+R+CGDCH+ K S V RE ++RD RFHHF G CSCGDYW
Sbjct: 808 MTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 164/309 (53%), Gaps = 6/309 (1%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
+N++L Y K +D A +LFD MP +D+V+W ++S SQ+ + A+ + M G+
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ + T +S L A A + ++G+Q+HA ++ + YV S+L+++YA+ +A
Sbjct: 267 RLDSTTYTSSLTAC-ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 325
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F +L +N V+W LI+G + +++ F++M E F+ +++ + S
Sbjct: 326 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 385
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L G+ +H+ +KSG V N+L+ MYAK +++ AE +F + ++D+VSW SM+T
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 445
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVE 328
+Q G +F+ M N +T+ +L A G ++G + Y ++ + V
Sbjct: 446 AYSQVGNVAKAREFFDGMSEK----NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501
Query: 329 PEEAHYVTF 337
P+ YVT
Sbjct: 502 PDWVTYVTL 510
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 34/386 (8%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N +LN YAK G L +A +LF MP +D+ +W L+SGY Q+ Q ++ F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 86 RLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
R G PN FTL+ +K+ GA Q+ A K+ + V ++L+DM+ R
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWH-SLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 188
Query: 145 MD-------------------------------DAWFLFTALESKNEVSWNALIAGHARK 173
+D A LF ++ ++ VSWN +++ ++
Sbjct: 189 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL +M +G +Y+S TA A SL GK +HA VI++ + +V
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 308
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ LV++YAKSG ++A+ VFN L R+ V+W +++G Q+G +V F +M +
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+Q +++ C L G+ +L K G + + + + L A
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428
Query: 354 IREMPIEPTAAVWGALLGACRMHKNV 379
R M E W +++ A NV
Sbjct: 429 FRFMN-EKDIVSWTSMITAYSQVGNV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N +++ YAK G + DA ++F R+ RDV SWN++++G Q ++ F M R+G +
Sbjct: 75 NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 134
Query: 294 -PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN T C + +C G A+++K + + VD+ R G +D A +
Sbjct: 135 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASR 194
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
+ EPT ++L V+ +A E + D ++ + + +GR
Sbjct: 195 LFVRIK-EPTMFCRNSMLAGYVKTYGVD---HALELFDSMPERDVVSWNMMVSALSQSGR 250
Query: 413 LNDAARARKMMKESGVK 429
+ +A M+ GV+
Sbjct: 251 VREALDMVVDMQSKGVR 267
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/558 (39%), Positives = 339/558 (60%), Gaps = 3/558 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+VH ++ + F +D+ ++ +++ YAKCG + +A ++FD M ++D+V WTA+I+ Y Q
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
++P A++LF +M G ++ T SV A G D + VH + + G+ +V
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQ-LGDGRMAISVHGYAVLNGFIGDVS 269
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
VG+S++ MYA+ ++ A +F +E +N +SWN++++G+ + AL F++M
Sbjct: 270 VGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASE 329
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P + + +A + GS G+ +H VI S + + N ++DMY K G ++ A
Sbjct: 330 CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAV 389
Query: 251 KVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
++FN L +RDV SWN +++G HG GK + F +M G+ PN +TF +L+ACSH
Sbjct: 390 EMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 449
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
AGL+DEG+ FA M K V PE HY VD+LGRAG L+ A + I+++P P+ VWGA
Sbjct: 450 AGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 509
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL ACR+H N ELG AA +F+L+P +G ++L++NIYA++ + + R+ MK G+
Sbjct: 510 LLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGL 569
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK A S +E VH F D + P +++K ++ ++K +GYVPD S VL +
Sbjct: 570 KKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEP 629
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+++E L HSEKLA+AF ++ G I + KN+RVC DCH AFKF S + R+IIVRD
Sbjct: 630 EDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRD 689
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFHHF+ G CSCGDYW
Sbjct: 690 GNRFHHFQGGRCSCGDYW 707
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 213/447 (47%), Gaps = 27/447 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFK-NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
CT L LK ++H+ + F + ++ Y+K G L AR LFD
Sbjct: 35 CTSLTTLK---LIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGH 91
Query: 61 WTA--------LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK--ASGAGATDD 110
A ++ Y+ + AI L+ M R+G+ N FT VLK AS GA
Sbjct: 92 TQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAV-- 149
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 170
FG VH ++ G+ +++V ++L+DMYA+ ++ DA +F + ++ V W A+I +
Sbjct: 150 -FGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ KAL F +M EGF + SV +A+ G VH + + +G
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDV 268
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
VGN++V MYAK G++E A VF+R+ +R+ +SWNSML+G Q+G + F +M +
Sbjct: 269 SVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 328
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
PN VT L +++ACS+ G G+ + ++ + +D+ + G LD A
Sbjct: 329 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTA 388
Query: 351 LKFIREMPI-EPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIY 407
++ + E + W L+ +H + + L ++ ++ ++P+D I +I
Sbjct: 389 VEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPND----ITFTSIL 444
Query: 408 AS---AGRLNDAARARKMMKESGVKKE 431
++ AG +++ + M + V+ E
Sbjct: 445 SACSHAGLIDEGRKCFADMTKLSVRPE 471
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 320/544 (58%), Gaps = 2/544 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ N + Y K G L ARKLFDEMP +++ TW A+++G + E ++ F
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G+ P++F L SV + AG D GRQVHA+ ++ G D ++ VGSSL MY R
Sbjct: 226 MRREGMHPDEFGLGSVFRCC-AGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 284
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ + + L S + VS N +IAG + + E AL F M G ++ S +
Sbjct: 285 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 344
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ + +L QG+ +H V+K+G V V LV MY++ G + D+E+VF D
Sbjct: 345 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 404
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++M++ HG G+ + F++M+ G P+ VTFL +L ACSH+GL +EG F LM
Sbjct: 405 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 464
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +G++P HY VDLLGR+G LD A I MP+ P +W LL AC+ KN ++
Sbjct: 465 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 524
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A+R+ ELDPHDS ++LL+NI A++ R D + RK M+++ V+KEP SWVE K
Sbjct: 525 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 584
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+H F D++HP++ I + E+ KI+Q GY PD S VL + +E+E L HSEKL
Sbjct: 585 IHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKL 644
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AFA +S P G I + KN+RVC DCH A K S+V REI+VRD +RFHHF+DG CSC
Sbjct: 645 AIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSC 704
Query: 563 GDYW 566
DYW
Sbjct: 705 RDYW 708
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 3/272 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + R VHA+++ S D+ + +++ + Y +CGCL E + +P +V+
Sbjct: 245 CAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSC 304
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G +QN E A+ F M +G+ + T S + + A + G+Q+H +
Sbjct: 305 NTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQ-GQQIHGQVM 363
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D V V + L+ MY+R + D+ +F + +A+I+ + G+KA+
Sbjct: 364 KAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIE 423
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +M+ G EP+ ++ ++ A + +G E+G + K+ G + T +VD+
Sbjct: 424 LFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLL 483
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+SG +++AE + + L D V W ++L+ C
Sbjct: 484 GRSGCLDEAEALILSMPLTPDGVIWKTLLSAC 515
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/551 (42%), Positives = 333/551 (60%), Gaps = 5/551 (0%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+LG N + + + +++ YAK G + +AR + D++ KD+V +TALI GYS + + +
Sbjct: 204 VLGVGVSN-VFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGES 262
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ +F M + G++ N++TLSSVL G D GR +H +K G + V +SLL
Sbjct: 263 LQVFRNMTKKGIEANEYTLSSVLVCCG-NLEDLTSGRLIHGLIVKAGLESAVASQTSLLT 321
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY R +DD+ +F + N+V+W ++I G + E AL F +MLR P F+
Sbjct: 322 MYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFT 381
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
SSV A +S LEQGK +HA V+K G + +VG L+D Y K GS E A VFN LL
Sbjct: 382 LSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLL 441
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+ DVVS NSM+ AQ+G G ++ F M G+ PN VT+L VL+AC++AGLL+EG
Sbjct: 442 EVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCH 501
Query: 318 YFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
F+ + G +E + HY VDLLGRAG L A I ++ I +W LL ACR+H
Sbjct: 502 IFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDV-VIWRTLLSACRIH 560
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
+VE+ R+ +L P D G H+LL+N+YAS G + + M+E +KK PA SW
Sbjct: 561 GDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSW 620
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
V+ + +H F+A D +HP I +K E+ EK+K++GYVPD+ VL D++++ L
Sbjct: 621 VDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLY 680
Query: 497 VHSEKLALAFAL-ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AFAL S +TI I KN+RVCGDCH+ KF SK+V R+II RD RFHHF
Sbjct: 681 YHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHF 740
Query: 556 RDGFCSCGDYW 566
R+G CSCGDYW
Sbjct: 741 RNGLCSCGDYW 751
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 196/347 (56%), Gaps = 6/347 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C +K + + + +H L F + + N +++AY KCG + ARK+FDE+P + +V
Sbjct: 86 QCIGIKSITDITKIQSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVPHRHIVA 143
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
W ++I+ Y +N + + AI ++ +M+ G+ P++FT SSV KA S G + G++ H
Sbjct: 144 WNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE--GQRAHGQ 201
Query: 120 CLKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G NV+VGS+L+DMYA+F +M DA + + K+ V + ALI G++ E +
Sbjct: 202 SVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGE 261
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+L+ F M ++G E ++ SSV + L G+ +H ++K+G + +L+
Sbjct: 262 SLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLT 321
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY + G ++D+ KVF + + + V+W S++ G Q+G + + F +MLR+ I PN T
Sbjct: 322 MYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFT 381
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
VL ACS +L++G+ A++ K G++ ++ +D G+ G
Sbjct: 382 LSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCG 428
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 162/275 (58%), Gaps = 2/275 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ L R++H I+ + ++ +A Q ++L Y +CG +D++ K+F + + VTW
Sbjct: 288 CGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTW 347
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I G QN + E A++ F QMLR + PN FTLSSVL+A + A ++ G+Q+HA +
Sbjct: 348 TSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQ-GKQIHAIVM 406
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+G D + YVG++L+D Y + + A +F L + VS N++I +A+ G +AL+
Sbjct: 407 KFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQ 466
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMY 240
FS M G EP + ++ V +A + G LE+G + + SG +L +VD+
Sbjct: 467 LFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLL 526
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
++G +++AE + N++ DVV W ++L+ C HG
Sbjct: 527 GRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHG 561
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
++ + S + + G + D Q HA LK G+ ++ G+ L+D Y + + A
Sbjct: 74 IQSTKLYSSLIQQCIGIKSITDITKIQSHA--LKRGFHHSL--GNKLIDAYLKCGSVVYA 129
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F + ++ V+WN++IA + R ++A+ + M+ +G P F++SSVF A +
Sbjct: 130 RKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDL 189
Query: 209 GSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G + +G+ H + G G FVG+ LVDMYAK G + DA V ++++ +DVV + ++
Sbjct: 190 GLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTAL 249
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+ G + HG +++ F M + GI N+ T VL C + L G+ L+ K G+
Sbjct: 250 IVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGL 309
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
E A + + + R GL+D +LK ++ I P W +++
Sbjct: 310 ESAVASQTSLLTMYYRCGLVDDSLKVFKQF-INPNQVTWTSVI 351
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/556 (40%), Positives = 344/556 (61%), Gaps = 6/556 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + F D+ ++ ++ Y+K G L +ARK+FDE+P K++V+WTA+I GY ++
Sbjct: 124 LHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGC 183
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF +L +GL+P+ FTL +L A + D GR + + + G NV+V +
Sbjct: 184 FGEALGLFRGLLEMGLRPDSFTLVRILYAC-SRVGDLASGRWIDGYMRESGSVGNVFVAT 242
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ M++A +F + K+ V W+ALI G+A ++AL F EM RE P
Sbjct: 243 SLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRP 302
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--FVGNTLVDMYAKSGSIEDAEK 251
++ VF+A + G+LE G W A + G + ++ +G L+D YAK GS+ A++
Sbjct: 303 DCYAMVGVFSACSRLGALELGNW--ARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKE 360
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF + ++D V +N++++G A G A F +M++ G+ P+ TF+ +L C+HAGL
Sbjct: 361 VFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGL 420
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+D+G YF+ M V P HY VDL RAGLL A IR MP+E + VWGALL
Sbjct: 421 VDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALL 480
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
G CR+HK+ +L + +++ EL+P +SG ++LL+NIY+++ R ++A + R + + G++K
Sbjct: 481 GGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQK 540
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CSWVE VH F+ D +HP I++K + + +++ GY P + VL +++E
Sbjct: 541 LPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEE 600
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E L HSEKLA+AFALIST I + KN+RVCGDCH A K SKV REIIVRD N
Sbjct: 601 KEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNN 660
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF +G CSC DYW
Sbjct: 661 RFHHFTEGSCSCRDYW 676
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 194/416 (46%), Gaps = 4/416 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
LK L +A+ H +L D + N +L + A +F + P ++ + L
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G ND +A+ +++ M + G P+ FT VLKA G +H+ +K G
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+DW+V+V + L+ +Y++ + DA +F + KN VSW A+I G+ +AL F
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+L G P F+ + A + G L G+W+ ++ +SG FV +LVDMYAK G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+E+A +VF+ ++++DVV W++++ G A +G+ K + F +M R + P+ + V +
Sbjct: 253 SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFS 312
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS G L+ G LM +D + G + +A + + M
Sbjct: 313 ACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMR-RKDCV 371
Query: 365 VWGALLGACRM--HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
V+ A++ M H G + + P D + L AG ++D R
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQP-DGNTFVGLLCGCTHAGLVDDGHR 426
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 15/281 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L R + ++ S ++ + ++++ YAKCG ++EAR++FD M KD+V W
Sbjct: 213 CSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCW 272
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+ALI GY+ N P+ A+ +F +M R ++P+ + + V A S GA + G
Sbjct: 273 SALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALE--LGNWARGLM 330
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ N +G++L+D YA+ + A +F + K+ V +NA+I+G A A
Sbjct: 331 DGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAF 390
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT----- 235
F +M++ G +P ++ + G ++ G H SG V V T
Sbjct: 391 GVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG-----HRYFSGMSSVFSVTPTIEHYG 445
Query: 236 -LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+VD+ A++G + +A+ + + ++ + + W ++L GC H
Sbjct: 446 CMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLH 486
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/553 (39%), Positives = 328/553 (59%), Gaps = 34/553 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H ++ ++ + N +++ Y KC LD AR++ DEMP +DMV+W ++++GY+QN +
Sbjct: 159 IHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGR 218
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A+ L +M L LKP+ T+ S+L A + D+ YV
Sbjct: 219 FNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVL-----------------YVKD 261
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+F L+ K+ +SWN +IA + + +A+ + +M G EP
Sbjct: 262 -----------------MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEP 304
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S SSV A + G+ +H +V + + + N L+DMYAK G +++A VF
Sbjct: 305 DAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVF 364
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++++ RDVVSW SM++ G GK V F+KM +G P+ + F+ VL ACSHAGL+D
Sbjct: 365 DQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVD 424
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
EG+ F LM ++G+ P HY VDLLGRAG +D A R+MP+EP VWG+LL AC
Sbjct: 425 EGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSAC 484
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
R++ ++ + AA+ +F+L P SG ++LL+NIYA AGR D R +M G+KK P
Sbjct: 485 RVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPG 544
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
S VE + V+ F+A D +H Q I+K + ++K++GY+P++ L +++++E
Sbjct: 545 NSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKEC 604
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L VHSEKLA+ FA+++T PGSTI I KNIRVCGDCH A K SK+ EREII+RDT+RFH
Sbjct: 605 HLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFH 664
Query: 554 HFRDGFCSCGDYW 566
HFRDG CSCGDYW
Sbjct: 665 HFRDGVCSCGDYW 677
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R +H ++ + ++ ++N +++ YAKCGCL EAR +FD+M +D+V+W
Sbjct: 316 CGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSW 375
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
T++IS Y + Q ++A+ LF +M G P+ SVL A S AG D+ GR
Sbjct: 376 TSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDE--GRYCFNLM 433
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKA 179
+YG + + ++D+ R ++D+A+ L + + NE W +L++ S A
Sbjct: 434 AEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIA 493
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
L + + E S + L S + G+W ++S
Sbjct: 494 LLAADHLFQLAPE------QSGYYVLLSNIYAKAGRWQDVETVRS 532
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 154/360 (42%), Gaps = 32/360 (8%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N +G L+ YA + +F + KN V +N +I + + AL F M
Sbjct: 70 NPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMA 129
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+GF P +++Y V A + +G+L G +H V+K G + ++GN LV MY K ++
Sbjct: 130 NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLD 189
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +V + + RD+VSWNSM+ G AQ+G ++ +M + P+ T +L A +
Sbjct: 190 AARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVT 249
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAA 364
+ + Y M E + + + + + A+ +M +EP A
Sbjct: 250 NTSC--DNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAV 307
Query: 365 VWGALLGACRMHKNVELGAYAAERIFE-LDPHDSGPHILLAN----IYASAGRLNDA-AR 418
++L AC LG RI E ++ P++LL N +YA G L +A A
Sbjct: 308 SISSVLPACGDLSAAVLG----RRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAV 363
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
+MM V SW +A M DA + +K++ G+ PD
Sbjct: 364 FDQMMFRDVV------SWTSMISAYGMSGQGKDA-----------VALFKKMRDSGFTPD 406
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 339/566 (59%), Gaps = 1/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + RI+H ++ S ++ + N +++ Y K G + +R++ +MP +D+V W
Sbjct: 473 CFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAW 532
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI GY++N+ P+ A+ F + G+ N T+ SVL A + G+ +HA+ +
Sbjct: 533 NALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIV 592
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ + +V +SL+ MYA+ + + LF L++++ ++WNA++A +A GE+ L+
Sbjct: 593 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLK 652
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
S+M G FS+S +A A LE+G+ +H +K G +L F+ N DMY+
Sbjct: 653 LVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYS 712
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I + K+ + R + SWN +++ +HG + F +ML GI P VTF+
Sbjct: 713 KCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVS 772
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+LTACSH GL+D+G Y+ ++ K G+EP H + +DLLGR+G L A FI +MP++
Sbjct: 773 LLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 832
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VW +LL +C++H++++ G AAE + +L+P D +L +N++A+ GR D R
Sbjct: 833 PNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVR 892
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M +KK+ ACSWV+ K+ V F D HPQ I+ K +I + IK+ GYV D+S
Sbjct: 893 KQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTS 952
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D++++E L HSE+LALA+AL+STP GST+ I KN+R+C DCHS +KF S+V+
Sbjct: 953 QALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVI 1012
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R I++RD RFHHF G CSC DYW
Sbjct: 1013 GRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 189/365 (51%), Gaps = 2/365 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+E VH + S +D+ + IL+ Y G + +RK+F+EMP +++V+WT+L+ G
Sbjct: 176 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 235
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS +PE I ++ M G++ N+ ++S V+ + G D+ GRQ+ +K G +
Sbjct: 236 YSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGL-LKDESLGRQIIGQVIKSGLES 294
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+ M+ +D A ++F + ++ +SWN+++A +A+ E++ R F+ M
Sbjct: 295 KLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMR 354
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R E + S++ + L + G+ +H V+K G V V NTL+ MYA +G E
Sbjct: 355 RFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSE 414
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A+ VF ++ +D++SWNS++ G + M+R G + N VTF L AC
Sbjct: 415 EADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACF 474
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
D+G+ L+ G+ + V + G+ G + + + + +MP A W
Sbjct: 475 SPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVA-WN 533
Query: 368 ALLGA 372
AL+G
Sbjct: 534 ALIGG 538
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 194/380 (51%), Gaps = 3/380 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK R + ++ S ++ +A++N++++ + G +D A +F+++ +D ++W
Sbjct: 271 CGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISW 330
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ Y+QN E + +F+ M R + N T+S++L G K+GR +H +
Sbjct: 331 NSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLG-DVDHQKWGRGIHGLVV 389
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D V V ++LL MYA + ++A +F + +K+ +SWN+L+A AL
Sbjct: 390 KMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 449
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M+R G + +++S A S ++G+ +H V+ SG +GN LV MY
Sbjct: 450 ILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYG 509
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + + +V ++ +RDVV+WN+++ G A++ + F+ + G++ N +T +
Sbjct: 510 KIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVS 569
Query: 302 VLTACSHAG-LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC G LL+ G+ A + G E +E + + + + G L + +
Sbjct: 570 VLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-N 628
Query: 361 PTAAVWGALLGACRMHKNVE 380
+ W A+L A H + E
Sbjct: 629 RSIITWNAILAANAHHGHGE 648
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 184/370 (49%), Gaps = 1/370 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ + + R +HA + + + NT++N Y K G + AR LFD+MPV++ V+W
Sbjct: 69 SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++SG + + F +M LG+KP+ F ++S++ A G + + G QVH F K
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G +VYV +++L +Y + + + +F + +N VSW +L+ G++ K E E+ +
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 248
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+ M EG E S S V ++ G+ + VIKSG + V N+L+ M+
Sbjct: 249 YKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN 308
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G+++ A +FN++ +RD +SWNS++ AQ+G + + R F M R N T +
Sbjct: 309 MGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTL 368
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L+ G+G L+ K G + T + + AG + A ++MP +
Sbjct: 369 LSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDL 428
Query: 363 AAVWGALLGA 372
+ W +L+ +
Sbjct: 429 IS-WNSLMAS 437
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 12/289 (4%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
T + GR +HA C+K +V ++L++MY +F ++ A +LF + +NEVSWN ++
Sbjct: 72 TRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMM 131
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL-EQGKWVHAHVIKSGG 226
+G R + + F +M G +P+ F +S+ TA +GS+ +G VH V KSG
Sbjct: 132 SGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 191
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+V ++ +Y G + + KVF + R+VVSW S++ G + G + + ++
Sbjct: 192 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKS 251
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDE---GQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
M G+ N+ + V+++C GLL + G+ + K G+E + A + + + G
Sbjct: 252 MRGEGVECNENSMSLVISSC---GLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN 308
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
G +D A +I E W +++ A + ++E + RIF L
Sbjct: 309 MGNVDYA-NYIFNQISERDTISWNSIVAAYAQNGHIE----ESSRIFNL 352
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 35/364 (9%)
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR---TFSEMLREGF 191
L+ M+ RF F+ L+ V + EG+K +R FS L + +
Sbjct: 9 LMKMFYRFVSRHSNTRRFSTLQCLERV----------EEEEGKKVIRWSGCFS--LSDHW 56
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + T + G+ +HA +K +L NTL++MY K G ++ A
Sbjct: 57 NPELSCFDQ--TGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARY 114
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG- 310
+F+++ R+ VSWN+M++G + GL + +F+KM GI P+ ++TAC +G
Sbjct: 115 LFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGS 174
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ EG + K G+ + + L G GL+ + K EMP + W +L+
Sbjct: 175 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLM 233
Query: 371 GACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
E + Y + R ++ +++ ++ + +S G L D + R+++ + V
Sbjct: 234 VGYSDKGEPEEVIDIYKSMRGEGVECNENS----MSLVISSCGLLKDESLGRQIIGQ--V 287
Query: 429 KKEPACSWVETKNAVHMFVAN----DDAHPQRAMIHKK----WREISEKIKQIGYVPDSS 480
K S + +N++ N D A+ I ++ W I Q G++ +SS
Sbjct: 288 IKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESS 347
Query: 481 HVLS 484
+ +
Sbjct: 348 RIFN 351
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/562 (40%), Positives = 335/562 (59%), Gaps = 42/562 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ E + VH + ++++ ++N++++ Y K GC A+KLFDEM V+D+V+W
Sbjct: 137 CAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSW 196
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISGY + + A ++F M+
Sbjct: 197 NTLISGYCFSGMVDKARMVFDGMM------------------------------------ 220
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N+ S+++ YAR +++A LF + +N VSWNA+IAG+A+ + A+
Sbjct: 221 ----EKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIE 276
Query: 182 TFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M EG P + SV +A A G+L+ GKW+H + ++ ++ F+GN L DMY
Sbjct: 277 LFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMY 336
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + +A+ VF+ + +RDV+SW+ ++ G A +G +F +M+ +G+ PN ++F+
Sbjct: 337 AKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFM 396
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+LTAC+HAGL+D+G YF +M + +G+ P+ HY VDLL RAG LD+A I MP+
Sbjct: 397 GLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPM 456
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P VWGALLG CR++K+ E G RI ELD + SG + LAN+YAS GRL+DAA
Sbjct: 457 QPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASC 516
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M+++ K P CSW+E N+V+ F D +HPQ I+ RE+ K+K GY P +
Sbjct: 517 RLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKT 576
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V+ D++E+E L HSEKLALAF LI+T G+TI I KN+RVC DCH A K SK+
Sbjct: 577 DLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKI 636
Query: 540 VEREIIVRDTNRFHHFRDGFCS 561
VEREI+VRD +RFHHF+DG CS
Sbjct: 637 VEREIVVRDRSRFHHFKDGKCS 658
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 127/305 (41%), Gaps = 68/305 (22%)
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSE--MLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
N ++NAL+ ++ + + F+ +L P ++++SV A A + +G+
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG- 275
VH V K G + FV N+LVD+Y K G A+K+F+ ++ RDVVSWN++++G G
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 276 -----------LGKATVRW-------------------FEKM-LRN-------------- 290
+ K V W FE M +RN
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQN 268
Query: 291 -----------------GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
G+APN VT + VL+AC+H G LD G+ ++++ +E
Sbjct: 269 EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFL 328
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV-ELGAYAAERIFE- 391
D+ + G + A EM E W ++ M+ E + AE I +
Sbjct: 329 GNALADMYAKCGCVLEAKGVFHEMH-ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 387
Query: 392 LDPHD 396
L+P+D
Sbjct: 388 LEPND 392
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 346/567 (61%), Gaps = 24/567 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + VH+ + S+F+ I NT+L+ Y+KCG LD A ++F++M +++V+W
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY+++ + + AI L QM + G+K + ++S+L A + D G+ VH +
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDN-GKDVHDYIK 379
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N++V ++L+DMYA+ M+ A +F+ + K+ +SWN +I GE
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------GE---- 427
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+P + + V A AS +LE+GK +H +++++G V N LVD+Y
Sbjct: 428 ---------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A +F+ + +D+VSW M+ G HG G + F +M GI P++V+F+
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL++G +F +MK +EP+ HY VDLL R G L +A +F+ +PI
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIA 598
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALL CR + ++EL AER+FEL+P ++G ++LLANIYA A + + R R
Sbjct: 599 PDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLR 658
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVA-NDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+ + + G++K P CSW+E K V++FV+ N+ +HP I +++ K+K+ G+ P +
Sbjct: 659 EKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKT 718
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L AD+ ++E L HSEKLA+AF L++ PP TI + KN+RVCGDCH KF SK
Sbjct: 719 KYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKE 778
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD+NRFHHF+DG+CSC +W
Sbjct: 779 TRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 162/370 (43%), Gaps = 52/370 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK + + VH+ I ++ D A+ +++ YA CG L E R++FD M K++ W
Sbjct: 109 CAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLW 168
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ S+ ++G L ++ G
Sbjct: 169 N----------------FMVSEYAKIGDFKESICLFKIMVEKGIEGK------------- 199
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + A+ LF L ++ +SWN++I+G+ E+ L
Sbjct: 200 ----------------------RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M+ G + + SV A++G+L GK VH+ IKS + NTL+DMY+
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 297
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF ++ +R+VVSW SM+ G + G ++ ++M + G+ + V
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITS 357
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ +G LD G+ +K + +E +D+ + G ++ A M ++
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKD 417
Query: 362 TAAVWGALLG 371
+ W ++G
Sbjct: 418 IIS-WNTMIG 426
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 54/261 (20%)
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
+NA I + + E A+ + E +Y SV A S GK VH+ +
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS------------------- 263
+ + +G LV YA G +++ +VF+ + K++V
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 264 --------------------------------WNSMLTGCAQHGLGKATVRWFEKMLRNG 291
WNSM++G +GL + + +++M+ G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
I + T + VL C+++G L G+ +L K E T +D+ + G LD AL
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 352 KFIREMPIEPTAAVWGALLGA 372
+ +M E W +++
Sbjct: 307 RVFEKMG-ERNVVSWTSMIAG 326
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 340/566 (60%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K ++ + +HA I + + ++N Y C L A LFD + +++ W
Sbjct: 11 CVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLW 70
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY+ N E AI L+ QM GL P++FT VLKA A + ++ G+++H +
Sbjct: 71 NVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE-GKKIHKDVI 129
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + +V+VG++L+DMYA+ ++ A +F ++ ++ V WN+++A +++ + +++L
Sbjct: 130 RSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLA 189
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M G +PT ++ A A G L QGK +H + + G + V L+DMYA
Sbjct: 190 LCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYA 249
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGS+ A +F L ++ VVSWN+M+TG A HG + F++M + + P+ +TF+
Sbjct: 250 KSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVG 308
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GLL+EG+ +F +++ + P HY +DLLG G L+ A K I EM +E
Sbjct: 309 VLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVE 368
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VWGALL +C++H NVE+G A E++ EL+P D G +++L+N+YA AG+ + AR R
Sbjct: 369 PDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLR 428
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M G+KK ACSW+E N VH F++ D +HP+ I+ + + + +K+ GY P
Sbjct: 429 DLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVG 488
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V + E+ + HSE+LA+AF LIST G+ + I KN+R+C DCH A KF SK+
Sbjct: 489 SVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKIT 548
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREI +RD NR+HHF+DG CSCGD+W
Sbjct: 549 EREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+S+ + ++E GK +HA + + G + LV++Y S+ +A +F+R+
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
KR++ WN M+ G A +G + + + +M G+ P++ TF VL ACS ++EG+
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + G+E + +D+ + G ++ A + ++ E W ++L
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSML 175
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/535 (42%), Positives = 326/535 (60%), Gaps = 3/535 (0%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
++ Y K GCL AR+LF+EMP ++++ W A+++ + +P + + G PN
Sbjct: 156 MDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNV 215
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
++ + A AGA G Q H F + G+D +V V ++++D Y + A +F
Sbjct: 216 VSVCAFFNAC-AGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFD 274
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
+ +N VSW ++I +A+ E AL + G EPT F SSV T A L
Sbjct: 275 GMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G+ +HA ++S FV + LVDMY K G +EDAE+VF + +R++V+WN+M+ G A
Sbjct: 335 GRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAH 394
Query: 274 HGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
G + + F+ M+R+G +PN +T + V+TACS GL +G F M+ + GVEP
Sbjct: 395 IGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRT 454
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGRAG+ +RA + I+ MP+ P+ +VWGALLGAC+MH ELG A+E++FE
Sbjct: 455 EHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFE 514
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
LDP DSG H+LL+N+ ASAGR +A RK MK G+KKEP CSW+ KN VH+F A D
Sbjct: 515 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDT 574
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
H + + I ++ ++++ GY+PD+ + L +++E+E ++ HSEKLALAF LI
Sbjct: 575 KHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHI 634
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PP I I KN+R+C DCH AFKF S +V REIIVRD NRFH+F+ CSC DYW
Sbjct: 635 PPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 149/278 (53%), Gaps = 8/278 (2%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
H ++ F D+++ N +++ Y KC C +AR +FD M V++ V+W ++I Y+Q+
Sbjct: 238 HGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAE 297
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
E+A+ ++ G +P F +SSVL + AG FGR +HA ++ D N++V S+
Sbjct: 298 EDALAVYMGARNTGEEPTDFMVSSVLT-TCAGLLGLNFGRALHAVAVRSCIDANIFVASA 356
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEP 193
L+DMY + ++DA +F + +N V+WNA+I G+A + + AL F M+R G P
Sbjct: 357 LVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSP 416
Query: 194 THFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
H + +V TA + G + G + + G + +VD+ ++G E A ++
Sbjct: 417 NHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEI 476
Query: 253 FNRLLKRDVVS-WNSMLTGCAQHG---LGK-ATVRWFE 285
R+ R +S W ++L C HG LG+ A+ + FE
Sbjct: 477 IQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFE 514
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 160/357 (44%), Gaps = 4/357 (1%)
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQV 116
+V++TA ISG +Q+ +P A+ F+ MLR+GL+PN FT S KA+ A G Q+
Sbjct: 76 VVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQI 135
Query: 117 HAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
HA L++GY + +V + +DMY + + A LF + ++N ++WNA++
Sbjct: 136 HALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGR 195
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+ + + + G P S + F A A L G+ H V+ G + V N
Sbjct: 196 PLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNA 255
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+VD Y K A VF+ + R+ VSW SM+ AQHG + + + G P
Sbjct: 256 MVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPT 315
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VLT C+ L+ G+ A+ + ++ VD+ G+ G ++ A +
Sbjct: 316 DFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFL 375
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
+MP E W A++G H A A S HI L N+ + R
Sbjct: 376 DMP-ERNLVTWNAMIGG-YAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSR 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA + S +I + + +++ Y KCG +++A ++F +MP +++VTW
Sbjct: 326 CAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTW 385
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
A+I GY+ +NA+ +F M+R G PN TL +V+ A S G T D +
Sbjct: 386 NAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGY-ELFDTM 444
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEK 178
++G + + ++D+ R + A+ + + + +S W AL+ A K G+
Sbjct: 445 RERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLG--ACKMHGKT 502
Query: 179 AL-RTFSEMLRE 189
L R SE L E
Sbjct: 503 ELGRIASEKLFE 514
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 348/555 (62%), Gaps = 4/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA+ + + +D+ + N++++ YAK + +FD+MP KD+V+WT +I+G++QN
Sbjct: 405 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 464
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF ++ G+ + +SS+L A +G +++H++ ++ G ++ + +
Sbjct: 465 HSRALELFREVQLEGIDLDVMMISSILLAC-SGLKLISSVKEIHSYIIRKGLS-DLVLQN 522
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
++D+Y +D A +F +E K+ VSW ++I+ + +AL F M G EP
Sbjct: 523 GIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 582
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
S S+ +A AS +L++GK +H +I+ G L + +TLVDMYA+ G++E + VF
Sbjct: 583 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 642
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +D+V W SM+ HG G+A + F +M IAP+ + F+ VL ACSH+GL++
Sbjct: 643 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 702
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ + MK ++ +EP HY VDLLGRA L+ A +F++ M +EPTA VW ALLGA
Sbjct: 703 EGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 762
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++H N ELG AA+++ E+DP + G ++L++N+Y++ R D R MK SG+KK P
Sbjct: 763 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNP 822
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSHVLSYADQQER 491
CSW+E N VH F+A D +HPQ I+ K +I+EK+ K+ GYV + VL A ++E+
Sbjct: 823 GCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEK 882
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L HSE+LA+A+ +++TP G+++ I KN+RVCGDCH+ K SK ERE+++RD NR
Sbjct: 883 VQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANR 942
Query: 552 FHHFRDGFCSCGDYW 566
FHHF+ G CSCGD W
Sbjct: 943 FHHFKGGVCSCGDVW 957
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 187/344 (54%), Gaps = 3/344 (0%)
Query: 2 CTHLKKLKEARIVHAHILGS-AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C K L E + VHAH++ S A N + + ++ Y KCGCL +A KLFD MP K + T
Sbjct: 88 CGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFT 147
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+I Y N +P ++ L+ +M G+ + T +LKA G D ++G +VH
Sbjct: 148 WNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGL-LKDRRYGAEVHGLA 206
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
+K GY V+V +S++ MY + + ++ A LF + K + VSWN++I+ ++ + +A
Sbjct: 207 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 266
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR F EM + P +++ + A + ++QG ++HA V+KS + FV N L+ M
Sbjct: 267 LRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAM 326
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ G + +A +F + D +SWNSML+G Q+GL ++++ +M G P+ V
Sbjct: 327 YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAV 386
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
+ ++ A + +G G A K+G++ + + VD+ +
Sbjct: 387 ISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 430
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 222/435 (51%), Gaps = 46/435 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C LK + VH + + + + + N+I+ Y KC L+ AR+LFD MP K D+V+
Sbjct: 190 CGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVS 249
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ---VH 117
W ++IS YS N Q A+ LF +M + L PN +T + L+A D F +Q +H
Sbjct: 250 WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA----CEDSSFIKQGMFIH 305
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A LK Y NV+V ++L+ MYARF +M +A +F ++ + +SWN++++G +
Sbjct: 306 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 365
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL+ + EM G +P + S+ A A +G+ G +HA+ +K+G VGN+LV
Sbjct: 366 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLV 425
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK S++ + +F+++ +DVVSW +++ G AQ+G + F ++ GI + +
Sbjct: 426 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 485
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L ACS L+ + + + + G+ DL+ + G++D
Sbjct: 486 MISSILLACSGLKLISSVKEIHSYIIRKGLS----------DLVLQNGIVD--------- 526
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL-DPHDSGPHILLANIYASAGRLNDA 416
+ G C NV+ YAA R+FEL + D + + Y G N+A
Sbjct: 527 -----------VYGEC---GNVD---YAA-RMFELIEFKDVVSWTSMISCYVHNGLANEA 568
Query: 417 ARARKMMKESGVKKE 431
+MKE+GV+ +
Sbjct: 569 LELFHLMKETGVEPD 583
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 193 PTHFS----YSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMYAKSGSIE 247
P+ FS YSSV S +L +G+ VHAH+I S F+ LV MY K G +
Sbjct: 72 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DAEK+F+ + + + +WN+M+ +G ++ + +M +GI + TF C+L AC
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC- 190
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYV------TFVDLLGRAGLLDRALKFIREMPIEP 361
GLL + + Y A + HG+ +E + + V + + L+ A + MP +
Sbjct: 191 --GLLKD-RRYGA--EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 245
Query: 362 TAAVWGALLGA 372
W +++ A
Sbjct: 246 DVVSWNSMISA 256
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K+ + +H ++ F + ++ +T+++ YA+CG L+++R +F+ + KD+V WT++I+ Y
Sbjct: 601 KKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAY 660
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD-- 126
+ AI LF +M + P+ +VL A ++ R + + +KY Y
Sbjct: 661 GMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES--MKYEYQLE 718
Query: 127 -WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGEKALR 181
W + + L+D+ R + +++A+ +E + W AL+ H+ K GE A +
Sbjct: 719 PWPEHY-ACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQ 777
Query: 182 TFSEM 186
EM
Sbjct: 778 KLLEM 782
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/613 (39%), Positives = 358/613 (58%), Gaps = 49/613 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + VH + L S D+ + N +++ YAKCG ++EA K+F+ M VKD+V+W
Sbjct: 241 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 300
Query: 62 TALISGYSQNDQPENAIILFS-----------------------------------QMLR 86
A+++GYSQ + ++A+ LF QM
Sbjct: 301 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL 360
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-------VYVGSSLLDMY 139
G +PN TL S+L T G++ H +K+ + + + V ++L+DMY
Sbjct: 361 CGSEPNVVTLVSLLSGCALAGTL-LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMY 419
Query: 140 ARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTH 195
++ A +F + K+ V+W LI G+A+ E +AL FS+ML+ P
Sbjct: 420 SKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNA 479
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ-LVAFVGNTLVDMYAKSGSIEDAEKVFN 254
F+ S A A G+L G+ +HA+V+++ + + FV N L+DMY+KSG ++ A VF+
Sbjct: 480 FTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFD 539
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ +R+ VSW S++TG HG G+ ++ F +M + G+ P+ VTF+ VL ACSH+G++D+
Sbjct: 540 NMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQ 599
Query: 315 GQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G YF M K GV P HY VDLL RAG LD A++ IR MP++PT AVW ALL AC
Sbjct: 600 GINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSAC 659
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
R++ NVELG YAA ++ EL+ + G + LL+NIYA+A D AR R +MK +G+KK P
Sbjct: 660 RVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPG 719
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
CSWV+ + F A D +HP I+ R++ ++IK +GYVPD+ L D +E+
Sbjct: 720 CSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGD 779
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSEKLALA+ +++T PG+ I I KN+R CGDCHSAF + S ++E EIIVRD++RFH
Sbjct: 780 LLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFH 839
Query: 554 HFRDGFCSCGDYW 566
HF++G CSC YW
Sbjct: 840 HFKNGSCSCRGYW 852
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 207/432 (47%), Gaps = 57/432 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM---PVKDM 58
C + + VHA + S F+ ++ + N +++ Y +CG + AR++FDEM V D+
Sbjct: 136 CGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDL 195
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
V+W ++++ Y Q A+ +F +M LG++P+ +L +VL A + + G+QVH
Sbjct: 196 VSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR-GKQVH 254
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL----------- 166
+ L+ G +V+VG++++DMYA+ M++A +F ++ K+ VSWNA+
Sbjct: 255 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 314
Query: 167 ------------------------IAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
IAG+A++ G +AL F +M G EP + S+
Sbjct: 315 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLL 374
Query: 203 TALASTGSLEQGKWVHAHVIK---------SGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ A G+L GK H H IK G L+ V N L+DMY+K S + A +F
Sbjct: 375 SGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLM--VINALIDMYSKCKSPKAARAMF 432
Query: 254 NRLLKRD--VVSWNSMLTGCAQHGLGKATVRWFEKMLR--NGIAPNQVTFLCVLTACSHA 309
+ + +D VV+W ++ G AQHG + F +ML+ N + PN T C L AC+
Sbjct: 433 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARL 492
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G L G+ A + ++ E +D+ ++G +D A M + W +
Sbjct: 493 GALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGVSWTS 551
Query: 369 LLGACRMHKNVE 380
L+ MH E
Sbjct: 552 LMTGYGMHGRGE 563
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 196/409 (47%), Gaps = 44/409 (10%)
Query: 6 KKLKEARIVHAHILGSAFKND----IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
K L A ++H +L +D I+M T N+ AK L R+L P V W
Sbjct: 40 KSLASAELIHQQLLVQGLPHDPTHIISMYLT-FNSPAKA--LSVLRRLH---PSSHTVFW 93
Query: 62 -TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
LI E+ + L+ +M RLG +P+ +T VLKA G + G VHA
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE-IPSFRCGASVHAVV 152
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGE 177
G++WNV+VG+ L+ MY R ++A +F + + + VSWN+++A + + +
Sbjct: 153 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 212
Query: 178 KALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+A++ F M + G P S +V A AS G+ +GK VH + ++SG FVGN +
Sbjct: 213 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 272
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDMYAK G +E+A KVF R+ +DVVSWN+M+TG +Q G + FEK+ I N
Sbjct: 273 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 332
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
VT+ V+ + GL E F M+ G EP + VT V LL
Sbjct: 333 VTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEP---NVVTLVSLLS-------------- 375
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLAN 405
A+ G LL H +A + I LD +D G +++ N
Sbjct: 376 -----GCALAGTLLHGKETH------CHAIKWILNLDENDPGDDLMVIN 413
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/614 (37%), Positives = 357/614 (58%), Gaps = 54/614 (8%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD--EARKLFDEMPVKDMVTWTA 63
K ++E + VHA ++ + +D A+ IL A D A +FD++P ++ W
Sbjct: 26 KSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNT 85
Query: 64 LISGYSQN-DQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I ++ D+ +A+++F QML ++PNQFT SVLKA A + G+QVH L
Sbjct: 86 VIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAE-GKQVHGLLL 144
Query: 122 KYGY-----------------------------------------------DWNVYVGSS 134
K+G ++NV + +
Sbjct: 145 KFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNV 204
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG-FEP 193
++D YAR + A LF + ++ VSWN +I+G+A+ ++A+ F M++ G P
Sbjct: 205 MVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLP 264
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SV A++ G LE GKWVH + K+ ++ +G+ LVDMYAK GSIE A +VF
Sbjct: 265 NRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVF 324
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
RL + +V++WN+++ G A HG + +M + GI+P+ VT++ +L+ACSHAGL+D
Sbjct: 325 ERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVD 384
Query: 314 EGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ +F ++ G++P+ HY VDLLGRAG L+ A + I MP++P +W ALLGA
Sbjct: 385 EGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGA 444
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
+MHKN+++G AAE + ++ PHDSG ++ L+N+YAS+G + A R MMK+ ++K+P
Sbjct: 445 SKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDP 504
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CSW+E +H F+ DD+H + IH EIS K+ G++PD++ VL D++ +E
Sbjct: 505 GCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKE 564
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
+ L HSEK+A+AF LISTPP + + I KN+R+C DCHS+ K SK+ ER+I++RD RF
Sbjct: 565 SVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRF 624
Query: 553 HHFRDGFCSCGDYW 566
HHF G CSC DYW
Sbjct: 625 HHFEHGSCSCMDYW 638
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L L+ + VH + + + D + + +++ YAKCG +++A ++F+ +P +++TW
Sbjct: 277 SRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWN 336
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVHA 118
A+I G + + + + S+M + G+ P+ T ++L A S AG D+ F V++
Sbjct: 337 AVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNS 396
Query: 119 FCLK-----YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHAR 172
LK YG ++D+ R +++A L + K ++V W AL+
Sbjct: 397 VGLKPKIEHYG---------CMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKM 447
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+ +R +E+L + +Y ++ AS+G+
Sbjct: 448 HKNIKIGMRA-AEVLMQMAPHDSGAYVALSNMYASSGN 484
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/566 (39%), Positives = 339/566 (59%), Gaps = 4/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L+ LK IVHA ++ +++ + N ++ Y K G + A+++ MP +D VTW
Sbjct: 372 CYNLETLK---IVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTW 428
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++ N +P AI F+ + G+ N T+ ++L A + G +HA +
Sbjct: 429 NALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIV 488
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G++ +V SSL+ MYA+ ++ + ++F L +KN +WNA+++ +A GE+AL+
Sbjct: 489 VAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALK 548
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M +G FS+S + + L++G+ +H+ +IK G + +V N +DMY
Sbjct: 549 LIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYG 608
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+D ++ + R SWN +++ A+HG + F +ML G+ P+ VTF+
Sbjct: 609 KCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVS 668
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSH GL+DEG YF+ M K GV H V +DLLGRAG L A FI +MP+
Sbjct: 669 LLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVP 728
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT VW +LL AC++H N+EL AA+R+FELD D ++L +N+ AS R D R
Sbjct: 729 PTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVR 788
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M+ +KK+PACSWV+ KN V F D HPQ A I+ K E+ + I++ GY+PD+S
Sbjct: 789 KQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTS 848
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L D++++E L HSE++ALAF LI++ GS + I KN+RVCGDCHS FK S+++
Sbjct: 849 YSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQII 908
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+II+RD RFHHF G CSC DYW
Sbjct: 909 GRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 196/376 (52%), Gaps = 6/376 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +H ++ S ++++ + N++L+ Y++ G ++A +F +M +D+++W
Sbjct: 271 CGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISW 330
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ + N A+ L +ML+ N T ++ L A T + VHAF +
Sbjct: 331 NSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLET----LKIVHAFVI 386
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G N+ +G++L+ MY +F M A + + ++EV+WNALI GHA E A+
Sbjct: 387 LLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIE 446
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F+ + EG + + ++ +A S L+ G +HAH++ +G +L FV ++L+ MY
Sbjct: 447 AFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMY 506
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ G + + +F+ L ++ +WN++L+ A +G G+ ++ KM +GI +Q +F
Sbjct: 507 AQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFS 566
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+ LLDEGQ +L+ KHG E + +D+ G+ G +D + + + P
Sbjct: 567 VAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQ-PRS 625
Query: 361 PTAAVWGALLGACRMH 376
+ W L+ A H
Sbjct: 626 RSQRSWNILISALARH 641
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 194/366 (53%), Gaps = 10/366 (2%)
Query: 12 RIVHAHILGSAFKN----DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+++ +LGS K+ +++ N++++ + C ++EA +FD+M +D ++W ++I+
Sbjct: 176 KMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITA 235
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
N E ++ FSQM K + T+S++L G+ A + ++GR +H +K G +
Sbjct: 236 SVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGS-AQNLRWGRGLHGMVVKSGLES 294
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV V +SLL MY++ + +DA F+F + ++ +SWN+++A H +AL EML
Sbjct: 295 NVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEML 354
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ + +++ TAL++ +LE K VHA VI G +GN LV MY K GS+
Sbjct: 355 QTRKATNYVTFT---TALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMA 411
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA-C 306
A++V + RD V+WN+++ G A + A + F + G+ N +T + +L+A
Sbjct: 412 AAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFL 471
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
S LLD G A + G E E + + + + G L+ + +I ++ ++ W
Sbjct: 472 SPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTS-NYIFDVLANKNSSTW 530
Query: 367 GALLGA 372
A+L A
Sbjct: 531 NAILSA 536
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 185/359 (51%), Gaps = 5/359 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHAH++ D+ + ++L+ Y G + E +F E+ ++V+WT+L+ GY+ N
Sbjct: 81 VHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGC 140
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ + ++ ++ R G+ N+ +++V+++ G D G QV +K G D V V +
Sbjct: 141 VKEVMSVYRRLRRDGVYCNENAMATVIRSCGV-LVDKMLGYQVLGSVIKSGLDTTVSVAN 199
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ M+ D +++A +F ++ ++ +SWN++I EK+L FS+M +
Sbjct: 200 SLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKT 259
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ + S++ S +L G+ +H V+KSG + V N+L+ MY+++G EDAE VF
Sbjct: 260 DYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVF 319
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ +RD++SWNSM+ +G + +ML+ A N VTF L+AC + L
Sbjct: 320 HKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLK 379
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ L+ G+ V + G+ G + A + + MP + W AL+G
Sbjct: 380 IVHAFVILL---GLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMP-DRDEVTWNALIGG 434
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 176/358 (49%), Gaps = 8/358 (2%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+K G ++ A+ +FD+MP ++ +W L+SG+ + + A+ F ML G++P+ +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+S++ A + QVHA +K G +V+VG+SLL Y F + + +F +E
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
N VSW +L+ G+A ++ + + + R+G + ++V + G
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
V VIKSG V N+L+ M+ SIE+A VF+ + +RD +SWNS++T +G
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ ++ +F +M + +T +L C A L G+G ++ K G+E +
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNS 301
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY--AAERIFEL 392
+ + +AG + A +F+ E W +++ + +V+ G Y A E + E+
Sbjct: 302 LLSMYSQAGKSEDA-EFVFHKMRERDLISWNSMMAS-----HVDNGNYPRALELLIEM 353
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY++F ++ A +F + +NE SWN L++G R +KA++ F ML G P+ +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 198 YSSVFTALASTGSLEQGKW-VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+S+ TA +G + +G + VHAHVIK G FVG +L+ Y G + + + VF +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+ ++VSW S++ G A +G K + + ++ R+G+ N+ V+ +C L+D+
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC--GVLVDKML 178
Query: 317 GYFAL--MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
GY L + K G++ + + + + G ++ A +M T + W +++ A
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTIS-WNSIITA 235
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 345/566 (60%), Gaps = 6/566 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L A V + + +D+ + + +L+ Y++CG ++EA ++FD MP KD V W
Sbjct: 117 CARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAW 176
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +++G+ +P A+ ++S+M G+ ++ + V++A + + G VH L
Sbjct: 177 STMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQAC-MSTGNARIGASVHGRLL 235
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++ +V +SL+ MYA+ +D A +F + +N+V+W+ALI+G A+ +AL
Sbjct: 236 RHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALD 295
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F E+ +G +P ++ S A AS G L+ GK +H +++ + +G ++DMY+
Sbjct: 296 LFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRL-EWQCILGTAVLDMYS 354
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E A K+FN+L RD+V WN+++ C HG G + F+++ GI P+ TF
Sbjct: 355 KCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFAS 414
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL++EG+ +F ++K+ G+EP E HYV VDLL R+GL++ A + M E
Sbjct: 415 LLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTE 474
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT A+W LL C +K +ELG A++I EL P D G L++N+YA+A + + R
Sbjct: 475 PTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIR 534
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+SG KK P S +E K H FV D +HPQ I K +++ +++++GYVP +
Sbjct: 535 KLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTE 594
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V Y D E + L HSE+LA+AF L++T PG+ + I KN+RVCGDCH A K+ SK+V
Sbjct: 595 FV--YHDLDEDQL-LSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIV 651
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD RFHHF+DG CSCGDYW
Sbjct: 652 DREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN L++ H+R ALR F L P +++ TA A G L+ + V
Sbjct: 76 WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+G FV + L+ +Y++ G++E+A +VF+ + ++D V+W++M+ G G +
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
+ +M +G++ ++V + V+ AC G G + +H + + + V +
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G LD A + R MP W AL+
Sbjct: 255 KNGHLDVACQVFRMMPYR-NDVTWSALI 281
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/562 (38%), Positives = 340/562 (60%), Gaps = 2/562 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + R VHA I + ++A+ N +L Y + G L++A++LFD M + +W+ ++
Sbjct: 64 RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIV 123
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GY++ + +F ++LR G + ++ V++A D K GR +H LK G
Sbjct: 124 GGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRAC-RDLKDLKCGRLIHCITLKCGL 182
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D+ +V ++L+DMYAR ++DA +F + ++ +W +I A ++L F
Sbjct: 183 DYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDR 242
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M +G P + +V A A G++ + K +HA++ +G L +G ++DMYAK GS
Sbjct: 243 MRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGS 302
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+E A +F+R+ R+V++W++M+ HG G+ + F MLR+GI PN++TF+ +L A
Sbjct: 303 VESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYA 362
Query: 306 CSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSHAGL++EGQ +F+ M ++GV P+ HY VDLLGRAG LD AL+ I MP+E
Sbjct: 363 CSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV 422
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
+WGALLGACR+H++++L A + +L G ++LL+NIYA+AG+ D A+ R +M
Sbjct: 423 LWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMT 482
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
+ G++K P +W+E ++ F D HP+ I+K + + EK++ GY PD++ VL
Sbjct: 483 KGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLY 542
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D++ ++ L HSEKLA+AF L+ P G I I KN+RVCGDCH+ KF S + ++ I
Sbjct: 543 DVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTI 602
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHF++G CSC DYW
Sbjct: 603 IVRDAKRFHHFKEGVCSCRDYW 624
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 13/219 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +A+ +HA+I G+ + D+ + +++ YAKCG ++ AR +FD M V++++TW
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITW 321
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ Y + Q E A+ LF MLR G+ PN+ T S+L A ++ R +
Sbjct: 322 SAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWD 381
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
+YG +V + ++D+ R ++D+A + + K+EV W AL+ H E
Sbjct: 382 EYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAE 441
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+ R+ ++ + +P H+ L S GKW
Sbjct: 442 RVARSLLKLQSQ--KPGHY-------VLLSNIYANAGKW 471
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN 254
H+ ++L S +L Q + VHA + +G V N L+ MY + G++EDA+++F+
Sbjct: 50 HYDTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFD 109
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ KR SW+ ++ G A+ G + F ++LR+G + + V+ AC L
Sbjct: 110 GMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKC 169
Query: 315 GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G+ + K G++ T VD+ R +++ A + +M + A W ++GA
Sbjct: 170 GRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM-WKRDLATWTVMIGA 226
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/566 (38%), Positives = 341/566 (60%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L R +H + L +F+ + N + AYAKCG L A +F M K + +W
Sbjct: 426 CLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSW 485
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G++QN P A+ + +M RLG+ P+ F++ S+L A G ++G+++H F L
Sbjct: 486 NAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL-QYGKEIHGFVL 544
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + N +V SLL +Y + F + KN V WNA+++G+++ +AL
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALS 604
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML +G EP + +S+ A + +L GK VH +K+ FV +L+DMYA
Sbjct: 605 LFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYA 664
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG + ++++FNRL ++V SWN M+TG HG G V FE M R+ P++ TFL
Sbjct: 665 KSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLG 724
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC HAGL+ EG Y A M+ + +EPE HY +D+LGRAG L+ AL FI EMP E
Sbjct: 725 VLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEE 784
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W +LL + + ++E+G AE++ L+ + + +ILL+N+YA+AG+ + R
Sbjct: 785 PDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVR 844
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MK+ ++K+ CSW+E + V+ F+A ++++P I K W + ++I +IGY PD S
Sbjct: 845 QKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCS 904
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL ++ E+ L+ HSEK+A+ F ++T G+T+ I KN+R+C DCH+A K+ SK
Sbjct: 905 CVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAA 964
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI++RD RFHHF+ G CSCGDYW
Sbjct: 965 KREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 8/378 (2%)
Query: 1 KCTHLKKLKEARIVHAHI-LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
KC K ++ R + + + S F D + ++ Y+ CG E+R +FD + K++
Sbjct: 116 KCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLF 175
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W AL+SGY +N+ + AI F +++ + +P+ FT ++KA G D G+ VH
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKAC-TGKCDIHLGKSVHG 234
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G +++VG++++ +Y + +D+A LF + +N +SWN+LI G + +
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294
Query: 179 ALRTFSEMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
A R F +L +G P + ++ + G+++ G +H +K G V N L
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNAL 354
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAP 294
+DMY+K G + +A +F ++ + VVSWNSM+ ++ G T KM +
Sbjct: 355 IDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV 414
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N+VT L +L AC L + +H + +E F+ + G L A
Sbjct: 415 NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF 474
Query: 355 REMPIEPTAAVWGALLGA 372
M + ++ W A++G
Sbjct: 475 FGMNTKSVSS-WNAVIGG 491
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 208/460 (45%), Gaps = 48/460 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + VH + D+ + N ++ Y KCG LDEA +LFD+MP +++++W
Sbjct: 220 CTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISW 279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+LI G+S+N A F +L G L P+ T+ ++L SG G D G +H
Sbjct: 280 NSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD--VGMVIHG 337
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS---E 175
+K G + V ++L+DMY++ + +A LF +E+K+ VSWN++I ++R+ E
Sbjct: 338 MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFE 397
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
LR M E E + ++ A L + +H + ++ Q + N
Sbjct: 398 TFDLLRKMW-MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNA 456
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+ YAK GS+ AE VF + + V SWN+++ G AQ+G + ++ +M R GI P+
Sbjct: 457 FIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPD 516
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL--------LGRA--- 344
+ + +L AC GLL G+ + ++G+E V+ + L GR
Sbjct: 517 DFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 345 --------------------GLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVEL 381
L + AL R+M +EP ++LGAC + L
Sbjct: 577 TMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 382 GAYAAERIFELDP---HDSGPHILLANIYASAGRLNDAAR 418
G F L D+ L ++YA +G L + R
Sbjct: 637 GKEV--HCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQR 674
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 339/568 (59%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +I+H ++ ++++ + NT++ Y KC + EA+K+F MP D VTW
Sbjct: 372 CLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTW 431
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKP--NQFTLSSVLKASGAGATDDKFGRQVHAF 119
ALI G++ N + A+ F +++R G + T+ ++L + K+G +HA
Sbjct: 432 NALIGGFANNAELNEAVAAF-KLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAH 490
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ G+D + +V SSL+ MYA+ + + ++F L K WNA+IA +AR GE+A
Sbjct: 491 TVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEA 550
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L+ M G E F++S+ + A LE+G+ +H IK G +L F+ N +DM
Sbjct: 551 LKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDM 610
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G ++DA ++ + R +SWN++++ A+HG F ML+ G+ PN V+F
Sbjct: 611 YGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSF 670
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+C+L+ACSH GL+DEG Y+A M +G++P H V +DLLGR+G L A FI EMP
Sbjct: 671 VCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMP 730
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
I P VW +LL +CR+++N++LG AA+ + ELDP D ++L +N++A+ GR D
Sbjct: 731 IPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVED 790
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R M ++K+PA SWV+ K + +F D HPQ I+ K + + + + GYVPD
Sbjct: 791 VRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPD 850
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S+ L D++++E + HSE++ALAF LI+ P GST+ I KN+RVCGDCHS FKF S
Sbjct: 851 TSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSG 910
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+ R+I++RD RFHHF +G CSC DYW
Sbjct: 911 VLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 192/402 (47%), Gaps = 5/402 (1%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
KE H + D+ + + ++ YA G + A+K+F+EMP +++V+WT+L+ Y
Sbjct: 76 KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSY 135
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
S N + I + +M G+ N+ ++ V+ + G D G Q+ LK+G +
Sbjct: 136 SDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGF-LMDIILGHQLLGHALKFGLETK 194
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V +SL+ M+ +++A +F + ++ +SWN++I+ +A+ + E++ R F M
Sbjct: 195 VSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRL 254
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
E + + S + + S L+ GK VH +K G + + NTL+ +Y+ +G +D
Sbjct: 255 VHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKD 314
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
AE +F R+ +RD++SWNSML Q G ++ F +ML N VTF L AC
Sbjct: 315 AELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLD 374
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
G+ + G++ E T + G+ + A K + MP + W A
Sbjct: 375 PEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMP-KLDKVTWNA 433
Query: 369 LLGACRMHKNVELG-AYAAERIFELDPHDSGPHILLANIYAS 409
L+G N EL A AA ++ +I + NI S
Sbjct: 434 LIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 196/382 (51%), Gaps = 14/382 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + LK + VH + +++I + NT+L+ Y+ G +A +F MP +D+++W
Sbjct: 271 CGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISW 330
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHA 118
++++ Y Q+ + A+ +F++ML + + N T +S L A D +F G+ +H
Sbjct: 331 NSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSAL----AACLDPEFFTNGKILHG 386
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
F + G + +G++L+ Y + +M +A +F + ++V+WNALI G A +E +
Sbjct: 387 FVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNE 446
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGS----LEQGKWVHAHVIKSGGQLVAFVGN 234
A+ F +++REG + Y ++ L S + ++ G +HAH + +G L V +
Sbjct: 447 AVAAF-KLMREG-STSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS 504
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+L+ MYAK G + + +F++L+ + WN+++ A++G G+ ++ +M GI
Sbjct: 505 SLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEF 564
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+Q F L+ + +L+EGQ K G E + +D+ G+ G LD AL+ +
Sbjct: 565 DQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRIL 624
Query: 355 REMPIEPTAAVWGALLGACRMH 376
+ P + + W L+ H
Sbjct: 625 PQ-PTDRSRLSWNTLISISARH 645
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 2/337 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+K G ++ A+ +FD M ++ +W ++SGY + A++ F + +G+KP+ F +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+S++ A + K G Q H F +K G ++V+VG+S + YA + + +A +F +
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+N VSW +L+ ++ ++ + T+ M EG + + V ++ + G
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ H +K G + N+L+ M+ G I +A +FN + +RD +SWNS+++ AQ+ L
Sbjct: 182 LLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTL 241
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ + R+F M N T +L+ C L G+G L K+G+E T
Sbjct: 242 HEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNT 301
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ + AG A R MP E W ++L AC
Sbjct: 302 LLSVYSDAGRSKDAELIFRRMP-ERDLISWNSML-AC 336
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 2/236 (0%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY++F +++ A +F + +NE SWN +++G+ R +A+ F ++ G +P+ F
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 198 YSSVFTALASTGSL-EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+S+ TA + + ++G H IK G FVG + V YA G + +A+K+FN +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
R+VVSW S++ + +G K + +++M GI N+ V+++C + G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
K G+E + + + + + G G ++ A EM T + W +++ A
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTIS-WNSIISA 235
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/567 (40%), Positives = 346/567 (61%), Gaps = 11/567 (1%)
Query: 8 LKEARIVHAHILGSA----FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L + R VHA+ + + K+ + + +L+ YAKCG L A ++F+ M V++ VTW+A
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSA 304
Query: 64 LISGYSQNDQPENAIILFSQMLRLGL---KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
L+ G+ + A LF ML GL P +++S L+A A +D G+Q+HA
Sbjct: 305 LVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPT--SVASALRAC-ANLSDLCLGKQLHALL 361
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G ++ G+SLL MYA+ +D A LF + K+ VS++AL++G+ + + ++A
Sbjct: 362 AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAF 421
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F +M +P + S+ A + +L+ GK H VI G + N L+DMY
Sbjct: 422 RVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMY 481
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G I+ + ++F+ + RD+VSWN+M+ G HGLGK F M P+ VTF+
Sbjct: 482 AKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFI 541
Query: 301 CVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
C+++ACSH+GL+ EG+ +F +M K+G+ P HY+ VDLL R G LD A +FI+ MP+
Sbjct: 542 CLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPL 601
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+ VWGALLGACR+HKN++LG + I +L P +G +LL+NI+++AGR ++AA
Sbjct: 602 KADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEV 661
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R + KE G KK P CSW+E ++H F+ D +H Q + I+++ I I ++GY D+
Sbjct: 662 RIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADT 721
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S VL +++E+E L HSEKLA+AF +++ TI + KN+RVCGDCH+ K+ + V
Sbjct: 722 SFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLV 781
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+R IIVRD NRFHHF++G CSCGD+W
Sbjct: 782 RKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 193/383 (50%), Gaps = 14/383 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ AR VH H + D+ + +++ YAKC A +F MP +D+V W
Sbjct: 139 CSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAW 198
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAF- 119
A+++GY+ + + + I +++ PN TL ++L + GA GR VHA+
Sbjct: 199 NAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQ--GRAVHAYS 255
Query: 120 ---CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
C + + V VG++LLDMYA+ + A +F A+ +NEV+W+AL+ G
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRM 315
Query: 177 EKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+A F +ML +G PT S +S A A+ L GK +HA + KSG G
Sbjct: 316 LEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L+ MYAK+G I+ A +F++++ +D VS++++++G Q+G R F KM +
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ T + ++ ACSH L G+ + G+ E + +D+ + G +D + +
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
MP + W ++ +H
Sbjct: 494 FDVMPARDIVS-WNTMIAGYGIH 515
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 172/334 (51%), Gaps = 14/334 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L + +HA + S D+ N++L+ YAK G +D+A LFD+M VKD V++
Sbjct: 345 CANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSY 404
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+AL+SGY QN + + A +F +M ++P+ T+ S++ A A + G+ H +
Sbjct: 405 SALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAA-LQHGKCGHGSVI 463
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + ++L+DMYA+ ++D + +F + +++ VSWN +IAG+ G++A
Sbjct: 464 VRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATA 523
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVH--AHVIKSGGQLVAFVGNTLVD 238
F +M + EP ++ + +A + +G + +GK W H AH ++ ++G +VD
Sbjct: 524 LFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIG--MVD 581
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP 294
+ A+ G +++A + + LK DV W ++L C H LGK +++ G
Sbjct: 582 LLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTG- 640
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
F+ + S AG DE + K+ G +
Sbjct: 641 ---NFVLLSNIFSAAGRFDEAAEVRIIQKEQGFK 671
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 163/332 (49%), Gaps = 11/332 (3%)
Query: 40 CGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV 99
CG L AR LFD++P + + ALI YS + S R +PN +T V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKN 159
LKA A D + R VH + G +++V ++L+D+YA+ A +F + +++
Sbjct: 136 LKACSA-LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V+WNA++AG+A + + ++++ P + ++ LA G+L QG+ VHA
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 220 HVIKSGG----QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
+ +++ + VG L+DMYAK G + A +VF + R+ V+W++++ G G
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 276 LGKATVRWFEKMLRNG---IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
F+ ML G ++P V L AC++ L G+ AL+ K G+ +
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLT 371
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
+ + + +AGL+D+A +M ++ T +
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVS 403
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 14/232 (6%)
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + + +NALI ++ + S R +P ++++ V A ++
Sbjct: 82 ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
L + VH H ++G FV LVD+YAK S A VF R+ RDVV+WN+M
Sbjct: 142 LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAM 201
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM----- 322
L G A HG T+ ++++ APN T + +L + G L +G+ A
Sbjct: 202 LAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACS 260
Query: 323 ---KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
K GV A +D+ + G L A + M + W AL+G
Sbjct: 261 LHDHKDGVLVGTA----LLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVG 307
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/598 (40%), Positives = 358/598 (59%), Gaps = 39/598 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIA----MQNTILNAYAKCGCLDEARKLFDEMPV-- 55
C+ L+ L R VHA +L +D+A + + +++ YA + AR++FD +P
Sbjct: 270 CSRLELLGVGREVHAFVLK---DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHG 326
Query: 56 KDMVTWTALISGYSQND-QPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKF- 112
+ + W A+I GY+Q+ E AI LFS+M G P++ T++ VL A A + F
Sbjct: 327 RQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPAC---ARSEVFT 383
Query: 113 GRQ-VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
G++ VH + +K N +V ++L+DMYAR +MD+A +F ++ ++ VSWN LI G
Sbjct: 384 GKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCI 443
Query: 172 RKSEGEKALRTFSEM-----------LREGFE---------PTHFSYSSVFTALASTGSL 211
+ +A + EM + EG + P + + ++ A +
Sbjct: 444 VQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAP 503
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+GK +H + ++ + VG+ LVDMYAK G + A VF+RL +R+V++WN ++
Sbjct: 504 ARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAY 563
Query: 272 AQHGLGKATVRWFEKMLRNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEP 329
HGLG + F++M+ NG A PN+VTF+ L ACSH+GL+D G F MK+ +G EP
Sbjct: 564 GMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEP 623
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACRMHKNVELGAYAAER 388
+ VD+LGRAG LD A I M P E + W +LGACR+H+NV+LG AAER
Sbjct: 624 TPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAER 683
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FEL+P ++ ++LL NIY++AG ++ R MM++ GV KEP CSW+E A+H F+A
Sbjct: 684 LFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMA 743
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
+ AHP+ A +H + E++++ GYVPD+S VL D+ E+ A L+ HSEKLA+AF L
Sbjct: 744 GESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGL 803
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ PPG+TI + KN+RVC DCH A KF S++V REI++RD RFHHFRDG CSCGDYW
Sbjct: 804 LRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 188/407 (46%), Gaps = 34/407 (8%)
Query: 2 CTHL--KKLKEARIVHAHILGSAFKNDIAMQ---NTILNAYAKCGCLDEARKLF--DEMP 54
C+HL + + R HA L F + + N +L+ YA+ G +D+A++LF
Sbjct: 162 CSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAG 221
Query: 55 VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR 114
V D+VTW +IS Q + E A+ + M+ LG++P+ T +S L A + GR
Sbjct: 222 VGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC-SRLELLGVGR 280
Query: 115 QVHAFCLK-YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHA 171
+VHAF LK N +V S+L+DMYA +Q+ A +F + + WNA+I G+A
Sbjct: 281 EVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYA 340
Query: 172 RK-SEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+ E+A+ FS M E G P+ + + V A A + + VH +V+K
Sbjct: 341 QHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASN 400
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
FV N L+DMYA+ G +++A +F + RD+VSWN+++TGC GL + +M
Sbjct: 401 RFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQL 460
Query: 290 NGIA--------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
A PN +T + +L C+ G+ +H +E
Sbjct: 461 PSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALES 520
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ A VD+ + G L A +P W L+ A MH
Sbjct: 521 DLAVGSALVDMYAKCGCLALARAVFDRLP-RRNVITWNVLIMAYGMH 566
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 183/384 (47%), Gaps = 17/384 (4%)
Query: 5 LKKLKEARIVHAHILGSAF--KNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMVT 60
L+ + R +H L A + A+ N +L AYA+CG LD A LF P ++D V+
Sbjct: 61 LRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVS 120
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
+ +LIS + +A+ ML + + FTL SVL A S + GR+ HAF
Sbjct: 121 YNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHLADQGHRLGREAHAF 179
Query: 120 CLKYGY---DWNVYVGSSLLDMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKS 174
LK+G+ + ++LL MYAR +DDA LF + + V+WN +I+ +
Sbjct: 180 ALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGG 239
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVG 233
E+A++ +M+ G P +++S A + L G+ VHA V+K +FV
Sbjct: 240 RCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVA 299
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQH-GLGKATVRWFEKM-LR 289
+ LVDMYA + + A +VF+ + + R + WN+M+ G AQH G+ + + F +M
Sbjct: 300 SALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAE 359
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G AP++ T VL AC+ + + + + K + +D+ R G +D
Sbjct: 360 AGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDE 419
Query: 350 ALKFIREMPIEPTAAVWGALLGAC 373
A + + + W L+ C
Sbjct: 420 AHTIFAMIDLRDIVS-WNTLITGC 442
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 17/246 (6%)
Query: 92 NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG--YDWNVYVGSSLLDMYAR--FDQMDD 147
+ F L +K S A D + R +H L+ + V ++LL YAR
Sbjct: 47 DHFALPPAIK-SAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAAL 105
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA--- 204
A F T + ++ VS+N+LI+ AL +ML + E + F+ SV A
Sbjct: 106 ALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLAD-HEVSSFTLVSVLLACSH 164
Query: 205 LASTGSLEQGKWVHAHVIKSG----GQLVAFVGNTLVDMYAKSGSIEDAEKVF--NRLLK 258
LA G G+ HA +K G G+ F N L+ MYA+ G ++DA+++F +
Sbjct: 165 LADQGH-RLGREAHAFALKHGFLDKGR-ERFPFNALLSMYARLGLVDDAQRLFFSSGAGV 222
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
D+V+WN+M++ Q G + V+ M+ G+ P+ VTF L ACS LL G+
Sbjct: 223 GDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREV 282
Query: 319 FALMKK 324
A + K
Sbjct: 283 HAFVLK 288
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/598 (38%), Positives = 350/598 (58%), Gaps = 35/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCL------------------ 43
C + LKE + VHAHI S + + N +L+ YAKCG L
Sbjct: 129 CLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSW 187
Query: 44 -------------DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL- 89
++AR LFD+MP +D +WTA+ISG Q+++PE A+ L+ M +
Sbjct: 188 NIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYS 247
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
K N+ T+SS L AS A G+++H ++ G D + V SLLDMY + +++A
Sbjct: 248 KSNKCTISSALAASAA-IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEAR 306
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
++F +E ++ VSW +I + + E+ F ++ P F+++ V A A
Sbjct: 307 YIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLA 366
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + GK +HA++++ G + + LV MY+K G IE+A+ VF L + D+ SW S+L
Sbjct: 367 AEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLV 426
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
G AQHG + +FE +L++G P+ + F+ VL+AC+HAGL+D+G YF ++ +KHG+
Sbjct: 427 GYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLT 486
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
HY +DLL RAG A I EMPI+P +W ALLG CR+H N+EL AA+
Sbjct: 487 RTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKS 546
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+FE++P + ++ LANIYASAG + A R+ M G+ K+P SW+E + VH+F
Sbjct: 547 LFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSV 606
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D++HP+ I + E+S+++K++GYVPD++ VL + +++E L HSEKLA+AF +
Sbjct: 607 GDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGI 666
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
ISTP G+ I + KN+R C DCH+A KF S + R+IIVRD+NRFH F G CSC DYW
Sbjct: 667 ISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
G+ LR ++L +P Y ++ +L++GK VHAH IK+ G + ++ N
Sbjct: 100 GQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNR 158
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+DMYAK GS+ DAEKVF+ ++ RD+ SWN M++G + G + F+KM PN
Sbjct: 159 LLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM------PN 212
Query: 296 QVTF--LCVLTACSHAGLLDEGQGYFALMKKH 325
+ F +++ C +E + LM+KH
Sbjct: 213 RDNFSWTAIISGCVQHNRPEEALELYRLMQKH 244
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/566 (38%), Positives = 341/566 (60%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L R +H + L +F+ + N + AYAKCG L A +F M K + +W
Sbjct: 426 CLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSW 485
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G++QN P A+ + +M RLG+ P+ F++ S+L A G ++G+++H F L
Sbjct: 486 NAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL-QYGKEIHGFVL 544
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + N +V SLL +Y + F + KN V WNA+++G+++ +AL
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALS 604
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML +G EP + +S+ A + +L GK VH +K+ FV +L+DMYA
Sbjct: 605 LFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYA 664
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG + ++++FNRL ++V SWN M+TG HG G V FE M R+ P++ TFL
Sbjct: 665 KSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLG 724
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC HAGL+ EG Y A M+ + +EPE HY +D+LGRAG L+ AL FI EMP E
Sbjct: 725 VLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEE 784
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W +LL + + ++E+G AE++ L+ + + +ILL+N+YA+AG+ + R
Sbjct: 785 PDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVR 844
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MK+ ++K+ CSW+E + V+ F+A ++++P I K W + ++I +IGY PD S
Sbjct: 845 QKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCS 904
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL ++ E+ L+ HSEK+A+ F ++T G+T+ I KN+R+C DCH+A K+ SK
Sbjct: 905 CVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAA 964
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI++RD RFHHF+ G CSCGDYW
Sbjct: 965 KREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 8/378 (2%)
Query: 1 KCTHLKKLKEARIVHAHI-LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
KC K ++ R + + + S F D + ++ Y+ CG E+R +FD + K++
Sbjct: 116 KCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLF 175
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W AL+SGY +N+ + AI F +++ + +P+ FT ++KA G D G+ VH
Sbjct: 176 QWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKAC-TGKCDIHLGKSVHG 234
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G +++VG++++ +Y + +D+A LF + +N +SWN+LI G + +
Sbjct: 235 MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLE 294
Query: 179 ALRTFSEMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
A R F +L +G P + ++ + G+++ G +H +K G V N L
Sbjct: 295 AYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNAL 354
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAP 294
+DMY+K G + +A +F ++ + VVSWNSM+ ++ G T KM +
Sbjct: 355 IDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEV 414
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N+VT L +L AC L + +H + +E F+ + G L A
Sbjct: 415 NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF 474
Query: 355 REMPIEPTAAVWGALLGA 372
M + ++ W A++G
Sbjct: 475 FGMNTKSVSS-WNAVIGG 491
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 208/460 (45%), Gaps = 48/460 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + VH + D+ + N ++ Y KCG LDEA +LFD+MP +++++W
Sbjct: 220 CTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISW 279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+LI G+S+N A F +L G L P+ T+ ++L SG G D G +H
Sbjct: 280 NSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD--VGMVIHG 337
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS---E 175
+K G + V ++L+DMY++ + +A LF +E+K+ VSWN++I ++R+ E
Sbjct: 338 MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFE 397
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
LR M E E + ++ A L + +H + ++ Q + N
Sbjct: 398 TFDLLRKMW-MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNA 456
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
+ YAK GS+ AE VF + + V SWN+++ G AQ+G + ++ +M R GI P+
Sbjct: 457 FIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPD 516
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL-------------LG 342
+ + +L AC GLL G+ + ++G+E V+ + L
Sbjct: 517 DFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 343 RAG------------------LLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVEL 381
R G L + AL R+M +EP ++LGAC + L
Sbjct: 577 RMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 382 GAYAAERIFELDP---HDSGPHILLANIYASAGRLNDAAR 418
G F L D+ L ++YA +G L + R
Sbjct: 637 GKEV--HCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQR 674
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/568 (37%), Positives = 345/568 (60%), Gaps = 12/568 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L++LK + + F + +++ +++ ++KCG ++ AR LF E+ KD+++ A+
Sbjct: 44 LQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAM 103
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ-----VHAF 119
ISG++ N + E+++ LF ++L G + + T+ ++ FG +H F
Sbjct: 104 ISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVY------SPFGHSYLCNCIHGF 157
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
C+K G + V ++L +Y R ++M A LF K SWNA+I+G + + A
Sbjct: 158 CVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAA 217
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F M + P + +S+ +A A G+L G+WVH+ + + + +V L+DM
Sbjct: 218 ISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDM 277
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GSI A ++F+ + +++ V+WN+M++G HG G+ ++ F ML + + P +TF
Sbjct: 278 YAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTF 337
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L VL ACSHAGL+ EG G F ++ G EP HY VD+LGRAG L +AL+FI+ MP
Sbjct: 338 LSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMP 397
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+EP VWGALLGAC +HK+ L A+E++FELDP + G ++L++NIY+ + AA
Sbjct: 398 VEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAAS 457
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R++ K+ + K P C+ +E H+F + D +HPQ I+ + +++ K+ + G+ +
Sbjct: 458 VRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTE 517
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
++ VL +++E+E ++VHSEKLA+AF LIST PG+ I I KN+RVC DCH+ KF SK
Sbjct: 518 TTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSK 577
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ +R I+VRD NRFHHF+DG CSCGDYW
Sbjct: 578 ITKRVIVVRDANRFHHFKDGLCSCGDYW 605
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L VH+ I + F++++ + +++ YAKCG + AR+LFD MP K+ VTW
Sbjct: 243 CAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTW 302
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGAT---DDKFGRQVH 117
A+ISGY + + A+ LF ML +KP T SVL A S AG D F VH
Sbjct: 303 NAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVH 362
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
F G++ + ++D+ R Q+ A A+ + W AL+
Sbjct: 363 DF----GFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLG 410
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/551 (40%), Positives = 332/551 (60%), Gaps = 7/551 (1%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F++D + ++ AYA G L AR++FDE PVK++ W AL+ + D + A+ +
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 83 QMLRLGLKPNQFTLSSVLKA----SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDM 138
M RLG+ + ++ + LKA S + A R+VHA ++ GY + +V ++L+D
Sbjct: 164 DMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDC 223
Query: 139 YARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE--PTHF 196
YA+ + A +F A+ +N VSW+A+I +A+ A+ F +M+ + P
Sbjct: 224 YAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSI 283
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ SV A A +L GK +HA++++ G + V N L+ MY + G +E +F +
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 257 -LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+RDVVSWNS+++G HG G V+ FE+M+ G +P+ +TF+ VL ACSHAGL++EG
Sbjct: 344 GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEG 403
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+ F M ++GV P HY VDLLGRAG LD A++ IR M IEP+ VWGALLGACR+
Sbjct: 404 KMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRI 463
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H +VE A +F+L+P ++G ++LLA+IYA A N +++++E ++K CS
Sbjct: 464 HGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGCS 523
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E K +H F + D+ +P + E ++K GYVPD+ VL + +E+E L
Sbjct: 524 WIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERIL 583
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AF LI+T G I I KN+R+C DCHS KF SK EREI+VRD NRFHHF
Sbjct: 584 IGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHHF 643
Query: 556 RDGFCSCGDYW 566
RDG CSCGDYW
Sbjct: 644 RDGVCSCGDYW 654
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 149/277 (53%), Gaps = 5/277 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+H R VHAH + + + T+++ YAK G + A +F MP +++V+W+
Sbjct: 190 SHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWS 249
Query: 63 ALISGYSQNDQPENAIILFSQMLR--LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
A+I Y++N++P +AI LF M+ L PN T+ SVL A AG G+ +HA+
Sbjct: 250 AMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNAC-AGVNALSHGKLLHAYI 308
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
L+ G+D V V ++L+ MY R ++ +F + ++ VSWN+LI+G+ G +A
Sbjct: 309 LRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEA 368
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F EM+ GF P+ ++ SV A + G + +GK + +++ G A +VD+
Sbjct: 369 VQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDL 428
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++G +++A ++ + ++ W ++L C HG
Sbjct: 429 LGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIHG 465
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C + L +++HA+IL F + +++ N ++ Y +CGCL+ R +F + +D+V+
Sbjct: 292 CAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVS 351
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
W +LISGY + A+ +F +M+ +G P+ T SVL A S AG ++ G+ +
Sbjct: 352 WNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNE--GKMLFES 409
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNAL-----IAGHAR 172
++YG + ++D+ R Q+D+A L ++ E +V W AL I GH
Sbjct: 410 MVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQV-WGALLGACRIHGHVE 468
Query: 173 KSE 175
+E
Sbjct: 469 YAE 471
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/543 (41%), Positives = 334/543 (61%), Gaps = 11/543 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ + +++ Y + G L EAR+LFDEMP +++++WT +ISGY QN Q + A LF M
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP 229
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+ N+ + +++L G ++ A +K V ++++ + + ++
Sbjct: 230 ----EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVK-----AVVACNAMILGFGQNGEV 280
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F + K++ +W+A+I + RK +AL F+ M REG + S SV +
Sbjct: 281 AKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVC 340
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
AS SL+ G+ VHA ++KS FV + L+ MY K G + A ++F+R +D+V WN
Sbjct: 341 ASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWN 400
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-K 324
S++TG AQHGL + ++ F +M +G+A + VTF+ VL+ACS+ G + EG F MK K
Sbjct: 401 SIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSK 460
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ VEP+ HY VDLLGRAGL++ A+ I++MP+E A +WGALLGACR H N+ L
Sbjct: 461 YLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEV 520
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+++ +L+P ++GP+ILL+NIYAS GR D A R+ M+ V K P CSW+E + VH
Sbjct: 521 AAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVH 580
Query: 445 MFVAN-DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
MF HP+ + I K ++ +++ GY PDSS VL D++E+ L HSE+LA
Sbjct: 581 MFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLA 640
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF L+ P G I + KN+RVCGDCHSA K +K+ REII+RD NRFHHF+DGFCSC
Sbjct: 641 VAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCR 700
Query: 564 DYW 566
DYW
Sbjct: 701 DYW 703
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 151/340 (44%), Gaps = 57/340 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N+ + YA+ G ++ AR++FDEMP K +V+W ++++GY QN++P A LF +M
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM------ 73
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P + T+S WN L+ Y + + +A
Sbjct: 74 PERNTVS-----------------------------WN-----GLISGYVKNRMVSEARK 99
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F + +N VSW A++ G+ ++ +A F +M E S++ + L
Sbjct: 100 AFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP----EKNVVSWTVMLGGLIQVRR 155
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+++ + + I +VA ++ Y + G + +A ++F+ + +R+V+SW +M++G
Sbjct: 156 IDEARGLFD--IMPVKDVVA--RTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISG 211
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
Q+G + FE M N+V++ +L + G ++E F M V
Sbjct: 212 YVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVAC 267
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
A + F G+ G + +A + ++ E W A++
Sbjct: 268 NAMILGF----GQNGEVAKARQVFDQIR-EKDDGTWSAMI 302
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 163/374 (43%), Gaps = 35/374 (9%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN-----------DQPENAII 79
N+++ Y + EAR LFD+MP ++ V+W LISGY +N PE ++
Sbjct: 51 NSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVV 110
Query: 80 LFSQMLR----LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG---YDW----N 128
++ M+R GL TL + + G + + +D +
Sbjct: 111 SWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKD 170
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V ++++ Y + ++ +A LF + +N +SW +I+G+ + + + A + F M
Sbjct: 171 VVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP- 229
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
E S++++ G +E+ + A +K+ N ++ + ++G +
Sbjct: 230 ---EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA-----VVACNAMILGFGQNGEVA 281
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +VF+++ ++D +W++M+ + G + F M R G+ N + + VL+ C+
Sbjct: 282 KARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCA 341
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK-FIREMPIEPTAAVW 366
LD G+ A + K + + + + + G L +A + F R P + +W
Sbjct: 342 SLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKD--IVMW 399
Query: 367 GALLGACRMHKNVE 380
+++ H VE
Sbjct: 400 NSIITGYAQHGLVE 413
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VHA ++ S F +D+ + + ++ Y KCG L +AR++FD KD+V W
Sbjct: 340 CASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMW 399
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+GY+Q+ E A+ +F +M G+ + T VL A + +
Sbjct: 400 NSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKS 459
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
KY + + ++D+ R ++DA L + + + + W AL+
Sbjct: 460 KYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLG 507
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 29/278 (10%)
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
+++N+ IA +AR + E A R F EM +G S++S+ + +++
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGI----VSWNSMVAGYFQNNRPREARYLFDK 72
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
+ + N L+ Y K+ + +A K F+ + +R+VVSW +M+ G Q GL
Sbjct: 73 MPERN----TVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEA 128
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
F +M N V++ +L +DE +G F +M V +
Sbjct: 129 ETLFWQMPEK----NVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDV----VARTNMISG 180
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD---S 397
+ G L A + EMP + W ++ + V++ A ++FE+ P S
Sbjct: 181 YCQEGRLAEARELFDEMPRRNVIS-WTTMISGYVQNGQVDV----ARKLFEVMPEKNEVS 235
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
+L+ Y GR+ +A+ M VK AC+
Sbjct: 236 WTAMLMG--YTQGGRIEEASELFDAMP---VKAVVACN 268
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
VA N+ + YA+ G IE A +VF+ + + +VSWNSM+ G Q+ + F+KM
Sbjct: 15 VAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP 74
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
N V++ +++ ++ E + F M + V A +V + GL+
Sbjct: 75 ER----NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYV----QEGLVS 126
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP-HDSGPHILLANIY 407
A +MP E W +LG + ++ A +F++ P D + + Y
Sbjct: 127 EAETLFWQMP-EKNVVSWTVMLGGLIQVRRID----EARGLFDIMPVKDVVARTNMISGY 181
Query: 408 ASAGRLNDAARARKMMKESGVKKEPACSW 436
GRL A AR++ E + + SW
Sbjct: 182 CQEGRL---AEARELFDE--MPRRNVISW 205
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/562 (38%), Positives = 342/562 (60%), Gaps = 3/562 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
++ L R +H + + F ++ NT+L+ Y+KCG L+ A ++F +M +V+WT+
Sbjct: 583 NIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTS 642
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
I+ Y + +AI LF +M G++P+ +T++S++ A ++ DK GR VH++ +K
Sbjct: 643 TIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK-GRDVHSYVIKN 701
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G N+ V ++L++MYA+ +++A +F+ + K+ VSWN +I G+++ S +AL F
Sbjct: 702 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELF 761
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M ++ F+P + + V A A +L++G+ +H H+++ G V LVDMYAK
Sbjct: 762 LDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKC 820
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G + A+ +F+ + K+D++SW M+ G HG G + F +M GI P++ +F +L
Sbjct: 821 GLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL 880
Query: 304 TACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH+GLL+EG +F M+ GVEP+ HY VDLL R G L +A KFI MPI+P
Sbjct: 881 NACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPD 940
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+WG LL CR+H +V+L AE IFEL+P ++ +++LAN+YA A + + + RK
Sbjct: 941 TTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKR 1000
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M++ G K+ P CSW+E ++FVA + HPQ I R+++ +++ Y +V
Sbjct: 1001 MQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYV 1060
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D E+E HSEK A+AF +++ PPG T+ + KN RVCGDCH KF SK +R
Sbjct: 1061 LINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKR 1120
Query: 543 EIIVRDTNRFHHFRDGFCSCGD 564
EI++RD+NRFHHF+DG CSC D
Sbjct: 1121 EIVLRDSNRFHHFKDGLCSCRD 1142
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 155/275 (56%), Gaps = 4/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VH++++ + +++ + N ++N YAKCG ++EAR +F ++PVKD+V+W
Sbjct: 682 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 741
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GYSQN P A+ LF M + KP+ T++ VL A A DK GR++H L
Sbjct: 742 NTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDK-GREIHGHIL 799
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ GY +++V +L+DMYA+ + A LF + K+ +SW +IAG+ G +A+
Sbjct: 800 RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIS 859
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
TF+EM G EP S+S + A + +G L +G K+ ++ + G + +VD+
Sbjct: 860 TFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLL 919
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
A+ G++ A K + +K D W +L+GC H
Sbjct: 920 ARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH 954
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 2/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L++ + VH+ I+ + D A+ ++ Y CG L + RK+FD++ + W
Sbjct: 379 CAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLW 438
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+S Y++ ++ LF +M +LG+ N +T + VLK A K ++VH + L
Sbjct: 439 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAA-LGKVKECKRVHGYVL 497
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ N V +SL+ Y +F ++ A LF L + VSWN++I G L
Sbjct: 498 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 557
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML G E + SV A A+ G+L G+ +H +K+ NTL+DMY+
Sbjct: 558 IFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 617
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A +VF ++ +VSW S + + GL + F++M G+ P+ T
Sbjct: 618 KCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 677
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
++ AC+ + LD+G+ + + K+G+ +++ + G ++ A ++P++
Sbjct: 678 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKD 737
Query: 362 TAAVWGALLGA 372
+ W ++G
Sbjct: 738 IVS-WNTMIGG 747
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 180 LRTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
LR E+L + +E SY SV A SLE GK VH+ +I +G + +G LV
Sbjct: 352 LRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLV 411
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY G + K+F++++ V WN +++ A+ G + +V F+KM + G+ N
Sbjct: 412 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 471
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
TF CVL + G + E + + K G A + + + G ++ A E+
Sbjct: 472 TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 531
Query: 358 PIEPTAAVWGALLGAC 373
EP W +++ C
Sbjct: 532 S-EPDVVSWNSMINGC 546
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/619 (36%), Positives = 352/619 (56%), Gaps = 71/619 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWT-------- 62
+H +L S +++ N ++ Y KC + +ARK+ DEMP KD +TWT
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244
Query: 63 -----------------------ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV 99
A+ISGY Q+ +A LF +M+ + ++FT +SV
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDW----NVYVGSSLLDMYAR----------FDQM 145
L A A A G+ VH ++ ++ + V ++L+ +Y++ FD M
Sbjct: 305 LSAC-ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363
Query: 146 ---------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
D A +F + KN++SW +++G+ E AL+ F+
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M E +P ++Y+ A G+L+ G+ +HAH+++ G + GN L+ MYAK G
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ DA VF + D VSWN+M++ QHG G+ + F++M+ GI P++++FL +LT
Sbjct: 484 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 543
Query: 305 ACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC+HAGL+DEG YF MK+ G+ P E HY +DLLGR+G + A I+ MP EPT
Sbjct: 544 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 603
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
++W A+L CR + ++E GAYAA+++F + P G +ILL+N Y++AGR DAAR RK+M
Sbjct: 604 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLM 663
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
++ GVKKEP CSW+E + +H+F+ D HP+ +++ I +++++GYVPD+ VL
Sbjct: 664 RDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVL 723
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ E+E L HSEKLA+ F L+ PPG+T+ + KN+R+CGDCH+A F SK V RE
Sbjct: 724 HDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGRE 783
Query: 544 IIVRDTNRFHHFRDGFCSC 562
I+VRD RFHHF+DG CSC
Sbjct: 784 IVVRDVRRFHHFKDGECSC 802
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 164/325 (50%), Gaps = 14/325 (4%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
++ I + D+ NTIL+ Y GCLD+A ++F MP K+ ++W ++SGY
Sbjct: 354 VIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 413
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYV 131
E+A+ LF+QM +KP +T + + A G GA K GRQ+HA ++ G++ +
Sbjct: 414 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL--KHGRQLHAHLVQCGFEASNSA 471
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G++LL MYA+ ++DA +F + + + VSWNA+I+ + G +AL F +M+ EG
Sbjct: 472 GNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGI 531
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVGNTLVDMYAKSGSI 246
+P S+ ++ TA G +++G + I G A L+D+ +SG I
Sbjct: 532 DPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA----RLIDLLGRSGRI 587
Query: 247 EDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+A + + S W ++L+GC +G + +++ R I + T++ +
Sbjct: 588 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRM-IPQHDGTYILLSNT 646
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPE 330
S AG + LM+ GV+ E
Sbjct: 647 YSAAGRWVDAARVRKLMRDRGVKKE 671
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 46/359 (12%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+++ A A G L +A FD +P +D V A++S +++ A+ +F +L G
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 89 -LKPNQFTLSSVLKASGAGAT-DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
L+P+ ++ ++++ A G Q+H LK G + V ++L+ +Y + D +
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 147 DAW----------------------------------FLFTALESKNEVSWNALIAGHAR 172
+W +F ++ K +V WNA+I+G+ +
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-- 230
A F M+ E F+++SV +A A+ G GK VH +I+ V
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335
Query: 231 --FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
V N LV +Y+K G I A+++F+ + +DVVSWN++L+G G V F+ M
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
N ++++ +++ H GL ++ F M+ V+P + Y + G G L
Sbjct: 396 YK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL 450
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK R +HAH++ F+ + N +L YAKCG +++AR +F MP D V+W
Sbjct: 444 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 503
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
A+IS Q+ A+ LF QM+ G+ P++ + ++L A AG D+ F H F
Sbjct: 504 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF----HYF- 558
Query: 121 LKYGYDWNVYVG----SSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSE 175
D+ + G + L+D+ R ++ +A L + + S W A+++G +
Sbjct: 559 ESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGD 618
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
E ++ R P H + L++T S G+WV A ++
Sbjct: 619 MEFGAYAADQLFR--MIPQH---DGTYILLSNTYS-AAGRWVDAARVR 660
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 348/565 (61%), Gaps = 12/565 (2%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVTWTALISGYSQ 70
R +HA + + + +++ N ++ +Y+K G L EAR++F + +D V+W +++ Y Q
Sbjct: 158 RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ + A+ L+ +M GL + FTL+SVL A D G Q HA +K GY N +
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAF-TNVQDLLGGLQFHAKLIKSGYHQNSH 276
Query: 131 VGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKALRTFSEMLR 188
VGS L+D+Y++ M D +F + + + V WN +I+G++ + ++AL F ++
Sbjct: 277 VGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQV 336
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSI 246
G P S V +A ++ S QG+ VH +K ++ V N L+ MY+K G++
Sbjct: 337 VGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRIS-VNNALIAMYSKCGNL 395
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA+ +F+ + + + VS+NSM+ G AQHG+G ++ F++ML G P +TF+ VL AC
Sbjct: 396 RDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAAC 455
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+H G +++G+ YF +MK K G+EPE H+ +DLLGRAG L A + I +P +P
Sbjct: 456 AHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFF 515
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W ALLGACR+H NVEL AA R+ +LDP ++ P+++LANIY+ GRL DAA RK+M++
Sbjct: 516 WSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRD 575
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK+P CSW+E +H+FVA D HP I + E+ KIK++GY P+ L
Sbjct: 576 RGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVG 635
Query: 486 AD----QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
D Q+E E +L HSEKLA++F L+ST G I + KN+R+C DCH+A K+ S+VV+
Sbjct: 636 GDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVK 695
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI VRD++RFH F+DG CSCG YW
Sbjct: 696 REITVRDSHRFHCFKDGQCSCGGYW 720
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 203/409 (49%), Gaps = 14/409 (3%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++AYAK ++ A +LFDEMP D V++ LI+ Y++ + A LF +M L
Sbjct: 78 NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS ++ A G RQ+HA + G D V VG++L+ Y++ + +A
Sbjct: 138 MDGFTLSGIITACGINV---GLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194
Query: 151 LFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F L E ++EVSWN+++ + + EG KAL + EM G F+ +SV TA +
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSML 268
L G HA +IKSG + VG+ L+D+Y+K G + D KVF+ + D+V WN+M+
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMI 314
Query: 269 TGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+G + + L + F ++ G P+ + +CV++ACS+ +G+ L K +
Sbjct: 315 SGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDI 374
Query: 328 EPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
P V + + + G L A MP E + +++ H +
Sbjct: 375 -PSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 386 AERIFEL--DPHDSGPHILLANIYASAGRLNDAARARKMMKES-GVKKE 431
+R+ E+ P + +LA A GR+ D MMK+ G++ E
Sbjct: 433 FQRMLEMGFTPTNITFISVLAAC-AHTGRVEDGKIYFNMMKQKFGIEPE 480
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 177/333 (53%), Gaps = 11/333 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC-GCLDEARKLFDEMPVKDMVTW 61
T+++ L HA ++ S + + + + +++ Y+KC GC+ + RK+FDE+ D+V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 62 TALISGYS-QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ISGYS D + A+ F Q+ +G +P+ +L V+ A ++ + GRQVH
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQ-GRQVHGLA 369
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK N + V ++L+ MY++ + DA LF + N VS+N++IAG+A+ G ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLV 237
L F ML GF PT+ ++ SV A A TG +E GK ++ +++K + G + ++
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMI 488
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-N 295
D+ ++G + +AE++ + W+++L C HG + ++ ++L+ + P N
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ--LDPLN 546
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
++ + S G L + LM+ GV+
Sbjct: 547 AAPYVMLANIYSDNGRLQDAASVRKLMRDRGVK 579
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 9/275 (3%)
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+D NV+ ++L+ YA+ ++ A LF + + VS+N LIA +AR+ + + A + F
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 185 EMLREGFEPTHFSYSSVFTALA-STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
EM + F+ S + TA + G + Q +HA + +G VGN L+ Y+K+
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQ---LHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 244 GSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +++A ++F+ L + RD VSWNSM+ QH G + + +M G+ + T V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG--LLDRALKFIREMPIE 360
LTA ++ L G + A + K G +DL + G +LD K E+
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD-CRKVFDEIS-N 304
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
P +W ++ +++++ A R ++ H
Sbjct: 305 PDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGH 339
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 338/560 (60%), Gaps = 1/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++ RI+H ++ S + + N +++ Y K G + E+R++ +MP +D+V W ALI G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++++ P+ A+ F M G+ N T+ SVL A + G+ +HA+ + G++
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V +SL+ MYA+ + + LF L+++N ++WNA++A +A GE+ L+ S+M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G FS+S +A A LE+G+ +H +K G + +F+ N DMY+K G I
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ K+ + R + SWN +++ +HG + F +ML GI P VTF+ +LTACS
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677
Query: 308 HAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+D+G Y+ ++ + G+EP H + +DLLGR+G L A FI +MP++P VW
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
+LL +C++H N++ G AAE + +L+P D ++L +N++A+ GR D RK M
Sbjct: 738 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 797
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
+KK+ ACSWV+ K+ V F D HPQ I+ K +I + IK+ GYV D+S L
Sbjct: 798 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 857
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D++++E L HSE+LALA+AL+STP GST+ I KN+R+C DCHS +KF S+V+ R I++
Sbjct: 858 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 917
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF G CSC DYW
Sbjct: 918 RDQYRFHHFERGLCSCKDYW 937
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 2/365 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+E VH + S +D+ + IL+ Y G + +RK+F+EMP +++V+WT+L+ G
Sbjct: 75 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS +PE I ++ M G+ N+ ++S V+ + G D+ GRQ+ +K G +
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL-LKDESLGRQIIGQVVKSGLES 193
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+ M +D A ++F + ++ +SWN++ A +A+ E++ R FS M
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R E + S++ + L + G+ +H V+K G V V NTL+ MYA +G
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ +D++SWNS++ G + M+ +G + N VTF L AC
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 373
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
++G+ L+ G+ + V + G+ G + + + + +MP A W
Sbjct: 374 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WN 432
Query: 368 ALLGA 372
AL+G
Sbjct: 433 ALIGG 437
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 189/380 (49%), Gaps = 3/380 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK R + ++ S ++ +A++N++++ G +D A +FD+M +D ++W
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ + Y+QN E + +FS M R + N T+S++L G K+GR +H +
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH-VDHQKWGRGIHGLVV 288
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D V V ++LL MYA + +A +F + +K+ +SWN+L+A AL
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M+ G + +++S A + E+G+ +H V+ SG +GN LV MY
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + ++ +V ++ +RDVV+WN+++ G A+ + F+ M G++ N +T +
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468
Query: 302 VLTACSHAG-LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC G LL+ G+ A + G E +E + + + + G L + +
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-N 527
Query: 361 PTAAVWGALLGACRMHKNVE 380
W A+L A H + E
Sbjct: 528 RNIITWNAMLAANAHHGHGE 547
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 165/336 (49%), Gaps = 1/336 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y K G + AR LFD MPV++ V+W ++SG + + F +M LG+KP+ F +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+S++ A G + + G QVH F K G +VYV +++L +Y + + + +F +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+N VSW +L+ G++ K E E+ + + M EG S S V ++ G+
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ V+KSG + V N+L+ M G+++ A +F+++ +RD +SWNS+ AQ+G
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ + R F M R N T +L+ H G+G L+ K G + T
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ + AG A ++MP + + W +L+ +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMAS 336
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 12/259 (4%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY +F ++ A LF + +NEVSWN +++G R + + F +M G +P+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 198 YSSVFTALASTGSL-EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+S+ TA +GS+ +G VH V KSG +V ++ +Y G + + KVF +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE-- 314
R+VVSW S++ G + G + + ++ M G+ N+ + V+++C GLL +
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 315 -GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ + K G+E + A + + +LG G +D A +I + E W ++ A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAY 236
Query: 374 RMHKNVELGAYAAERIFEL 392
+ ++E + RIF L
Sbjct: 237 AQNGHIE----ESFRIFSL 251
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 48/285 (16%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+E + +H + F++D + N + Y+KCG + E K+ + + +W L
Sbjct: 578 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 637
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
IS ++ E F +ML +G+KP T S+L A G DK +G
Sbjct: 638 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 697
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGEKAL 180
+ + ++D+ R ++ +A + + K N++ W +L+A H G KA
Sbjct: 698 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 757
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
S++ EP S +V+ S +M+
Sbjct: 758 ENLSKL-----EPEDDS---------------------VYVLSS-------------NMF 778
Query: 241 AKSGSIEDAEKV-----FNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
A +G ED E V F + K+ SW + + G+G T
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 823
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 338/560 (60%), Gaps = 1/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++ RI+H ++ S + + N +++ Y K G + E+R++ +MP +D+V W ALI G
Sbjct: 468 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 527
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++++ P+ A+ F M G+ N T+ SVL A + G+ +HA+ + G++
Sbjct: 528 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 587
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V +SL+ MYA+ + + LF L+++N ++WNA++A +A GE+ L+ S+M
Sbjct: 588 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 647
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G FS+S +A A LE+G+ +H +K G + +F+ N DMY+K G I
Sbjct: 648 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 707
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ K+ + R + SWN +++ +HG + F +ML GI P VTF+ +LTACS
Sbjct: 708 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 767
Query: 308 HAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+D+G Y+ ++ + G+EP H + +DLLGR+G L A FI +MP++P VW
Sbjct: 768 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 827
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
+LL +C++H N++ G AAE + +L+P D ++L +N++A+ GR D RK M
Sbjct: 828 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 887
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
+KK+ ACSWV+ K+ V F D HPQ I+ K +I + IK+ GYV D+S L
Sbjct: 888 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 947
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D++++E L HSE+LALA+AL+STP GST+ I KN+R+C DCHS +KF S+V+ R I++
Sbjct: 948 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 1007
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF G CSC DYW
Sbjct: 1008 RDQYRFHHFERGLCSCKDYW 1027
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 195/380 (51%), Gaps = 7/380 (1%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
H+ K R +H ++ F + + + NT+L YA G EA +F +MP KD+++W +
Sbjct: 363 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 422
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCL 121
L++ + + + +A+ L M+ G N T +S L A T D F GR +H +
Sbjct: 423 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC---FTPDFFEKGRILHGLVV 479
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G +N +G++L+ MY + +M ++ + + ++ V+WNALI G+A + +KAL
Sbjct: 480 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 539
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M EG + + SV +A G LE+GK +HA+++ +G + V N+L+ MY
Sbjct: 540 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 599
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + ++ +FN L R++++WN+ML A HG G+ ++ KM G++ +Q +F
Sbjct: 600 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 659
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
L+A + +L+EGQ L K G E + + D+ + G + +K + +
Sbjct: 660 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVN 718
Query: 361 PTAAVWGALLGACRMHKNVE 380
+ W L+ A H E
Sbjct: 719 RSLPSWNILISALGRHGYFE 738
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 186/371 (50%), Gaps = 3/371 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R + ++ S ++ +A++N++++ G +D A +FD+M +D ++W ++ + Y+Q
Sbjct: 269 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N E + +FS M R + N T+S++L G K+GR +H +K G+D V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH-VDHQKWGRGIHGLVVKMGFDSVVC 387
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++LL MYA + +A +F + +K+ +SWN+L+A AL M+ G
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+ +++S A + E+G+ +H V+ SG +GN LV MY K G + ++
Sbjct: 448 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 507
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+V ++ +RDVV+WN+++ G A+ + F+ M G++ N +T + VL+AC G
Sbjct: 508 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 567
Query: 311 -LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
LL+ G+ A + G E +E + + + + G L + + W A+
Sbjct: 568 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 626
Query: 370 LGACRMHKNVE 380
L A H + E
Sbjct: 627 LAANAHHGHGE 637
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 172/365 (47%), Gaps = 27/365 (7%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+E VH + S +D+ + IL+ Y G + +RK+F+EMP +++V+WT+L+ G
Sbjct: 190 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 249
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS +PE I ++ D+ GRQ+ +K G +
Sbjct: 250 YSDKGEPEEVIDIYK--------------------------DESLGRQIIGQVVKSGLES 283
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+ M +D A ++F + ++ +SWN++ A +A+ E++ R FS M
Sbjct: 284 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 343
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R E + S++ + L + G+ +H V+K G V V NTL+ MYA +G
Sbjct: 344 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 403
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ +D++SWNS++ G + M+ +G + N VTF L AC
Sbjct: 404 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 463
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
++G+ L+ G+ + V + G+ G + + + + +MP A W
Sbjct: 464 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WN 522
Query: 368 ALLGA 372
AL+G
Sbjct: 523 ALIGG 527
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 170/362 (46%), Gaps = 26/362 (7%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R VHA + + + NT++N Y K G + AR LFD MPV++ V+W ++SG +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ F +M LG+KP+ F ++S++ A G + + G QVH F K G +VY
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V +++L +Y + + + +F + +N VSW +L+ G++ K E E+ + + +
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDE---- 266
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
G+ + V+KSG + V N+L+ M G+++ A
Sbjct: 267 ---------------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F+++ +RD +SWNS+ AQ+G + + R F M R N T +L+ H
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+G L+ K G + T + + AG A ++MP + + W +L+
Sbjct: 366 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLM 424
Query: 371 GA 372
+
Sbjct: 425 AS 426
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 35/288 (12%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
T + GR VHA C+K +V ++L++MY +F ++ A LF + +NEVSWN ++
Sbjct: 86 TIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMM 145
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL-EQGKWVHAHVIKSGG 226
+G R + + F +M G +P+ F +S+ TA +GS+ +G VH V KSG
Sbjct: 146 SGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 205
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+V ++ +Y G + + KVF + R+VVSW S++ G + G + + ++
Sbjct: 206 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK- 264
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDE--GQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
DE G+ + K G+E + A + + +LG
Sbjct: 265 --------------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 298
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
G +D A +I + E W ++ A + ++E + RIF L
Sbjct: 299 GNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIE----ESFRIFSL 341
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 48/285 (16%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+E + +H + F++D + N + Y+KCG + E K+ + + +W L
Sbjct: 668 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 727
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
IS ++ E F +ML +G+KP T S+L A G DK +G
Sbjct: 728 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 787
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGEKAL 180
+ + ++D+ R ++ +A + + K N++ W +L+A H G KA
Sbjct: 788 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 847
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
S++ EP S +V+ S +M+
Sbjct: 848 ENLSKL-----EPEDDS---------------------VYVLSS-------------NMF 868
Query: 241 AKSGSIEDAEKV-----FNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
A +G ED E V F + K+ SW + + G+G T
Sbjct: 869 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 913
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/590 (39%), Positives = 350/590 (59%), Gaps = 28/590 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDM 58
C+ L+ L R +HA +L A + + + +++ YA + AR++FD +P + +
Sbjct: 292 CSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQL 351
Query: 59 VTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKF-GRQ- 115
W A+I GY+Q E A+ LFS+M G P++ T+S VL A A + F G++
Sbjct: 352 GMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPAC---ARSEGFAGKEA 408
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+H + +K G N +V ++L+DMYAR +MD A +F ++ ++ VSWN LI G +
Sbjct: 409 MHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGH 468
Query: 176 GEKALRTFSEM------------LREG----FEPTHFSYSSVFTALASTGSLEQGKWVHA 219
+A + +EM EG P + + ++ A+ + +GK +H
Sbjct: 469 AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHG 528
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+ ++ + VG+ LVDMYAK G + + VF+RL +R+V++WN ++ HGLG
Sbjct: 529 YAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDE 588
Query: 280 TVRWFEKMLRNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTF 337
V F++M G A PN+VTF+ L ACSH+GL+D G F M++ HGV+P +
Sbjct: 589 AVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACV 648
Query: 338 VDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
VD+LGRAG LD A I M P E + W +LLGACR+H+NVELG AAER+FEL+P +
Sbjct: 649 VDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGE 708
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
+ ++LL NIY++AG + + R M+ GV KEP CSW+E A+H F+A + +HP
Sbjct: 709 ASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPAS 768
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGST 516
A +H + E++++ GY PD+S VL D+ E+ A L+ HSEKLA+AF L+ PPG+
Sbjct: 769 AEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAA 828
Query: 517 IHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I + KN+RVC DCH A KF SK+V R+I++RD RFHHFRDG CSCGDYW
Sbjct: 829 IRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 186/407 (45%), Gaps = 34/407 (8%)
Query: 2 CTHLKK---LKEARIVHAHILGSAFKNDIAMQ---NTILNAYAKCGCLDEARKLFDEMPV 55
C+HL + R HA L F ++ + N +L+ YA+ G +D+A+ LF
Sbjct: 179 CSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAA 238
Query: 56 K------DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD 109
D+VTW +IS Q + A+ + M+ LG++P+ T +S L A +
Sbjct: 239 AFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPAC-SRLEM 297
Query: 110 DKFGRQVHAFCLKYG-YDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNAL 166
GR++HA LK N +V S+L+DMYA +++ A +F + S+ WNA+
Sbjct: 298 LALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAM 357
Query: 167 IAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
I G+A+ E+AL FS M E G P+ + S V A A + + +H +V+K G
Sbjct: 358 ICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRG 417
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
FV N L+DMYA+ G ++ A ++F + RDVVSWN+++TGC G +
Sbjct: 418 MAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVT 477
Query: 286 KM------------LRNGIA----PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
+M G A PN +T + +L C+ G+ +H +E
Sbjct: 478 EMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALES 537
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ A VD+ + G L + +P W L+ A MH
Sbjct: 538 DIAVGSALVDMYAKCGCLAASRAVFDRLP-RRNVITWNVLIMAYGMH 583
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 168/365 (46%), Gaps = 21/365 (5%)
Query: 28 AMQNTILNAYAKCG--CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
A+ N +L AYA+CG A ++D V++ +LIS Q E A+ ML
Sbjct: 101 AVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDML 160
Query: 86 RLGLKP-NQFTLSSVLKASGAGATDD--KFGRQVHAFCLKYGY---DWNVYVGSSLLDMY 139
G + FTL SVL A DD + GR+ HAF LK G+ + ++LL MY
Sbjct: 161 AEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMY 220
Query: 140 ARFDQMDDAWFLFTALESK------NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
AR +DDA LF + + V+WN +I+ + +A+ +M+ G P
Sbjct: 221 ARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRP 280
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGSIEDAEKV 252
+++S A + L G+ +HA V+K +FV + LVDMYA + + A +V
Sbjct: 281 DGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRV 340
Query: 253 FNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHA 309
F+ + + R + WN+M+ G AQ G+ + + F +M G AP++ T VL AC+ +
Sbjct: 341 FDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARS 400
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGA 368
+ + K G+ +D+ R G +D A + I+P V W
Sbjct: 401 EGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAM--IDPRDVVSWNT 458
Query: 369 LLGAC 373
L+ C
Sbjct: 459 LITGC 463
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 327/515 (63%), Gaps = 2/515 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+L+ YAKCG + +AR F+ +P D++ + +IS Y+Q++Q E A LF +++R + PN
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+++LSSVL+A D FG+Q+H +K G++ +++VG++L+D YA+ + MD + +F
Sbjct: 364 EYSLSSVLQACTNMVQLD-FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
++L NEVSWN ++ G ++ GE+AL F EM T +YSSV A AST S+
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+H + KS +GN+L+D YAK G I DA KVF L++RD++SWN++++G A
Sbjct: 483 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
HG + F++M ++ + N +TF+ +L+ CS GL++ G F M+ HG++P
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY V LLGRAG L+ AL+FI ++P P+A VW ALL +C +HKNV LG ++AE+I E
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 662
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
++P D ++LL+N+YA+AG L+ A RK M+ GV+K P SWVE K +H F
Sbjct: 663 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
HP +I+ ++ K + GY+PD + VL D++++ L VHSE+LALA+ L+ T
Sbjct: 723 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 782
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
PPG I I KN+R C DCH+AF SK+V+REIIV
Sbjct: 783 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 186/345 (53%), Gaps = 4/345 (1%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++AY+ C + +A +F+ + KD V WTA++S YS+ND PENA +FS+M G KPN
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
F L+SVLKA+ G+ +H +K D +VG +LLDMYA+ + DA F
Sbjct: 263 PFALTSVLKAA-VCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAF 321
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ + + + +I+ +A+ ++ E+A F ++R P +S SSV A + L+
Sbjct: 322 EMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLD 381
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
GK +H H IK G + FVGN L+D YAK ++ + K+F+ L + VSWN+++ G +
Sbjct: 382 FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFS 441
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEE 331
Q GLG+ + F +M + QVT+ VL AC S A + GQ + ++ +K +
Sbjct: 442 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSI-EKSTFNNDT 500
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ +D + G + ALK + + +E W A++ +H
Sbjct: 501 VIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 544
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 177/358 (49%), Gaps = 3/358 (0%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C + R VH H++ G + D+ N +LN Y K G L AR+LFD MP ++MV
Sbjct: 69 CIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMV 128
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ L+ ++Q E A LF ++ G + NQF L+++LK + A G VH+
Sbjct: 129 SFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAG-GVHSC 187
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K G+D N +VGS L+D Y+ + DA +F + K+ V W A+++ ++ E A
Sbjct: 188 AWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R FS+M G +P F+ +SV A S+ GK +H IK+ VG L+DM
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+DA F + DV+ + M++ AQ + F +++R+ + PN+ +
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
VL AC++ LD G+ K G E + +D + +D +LK +
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 166/329 (50%), Gaps = 16/329 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT++ +L + +H H + ++D+ + N +++ YAKC +D + K+F + + V+W
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 433
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ G+SQ+ E A+ +F +M + Q T SSVL+A + A+ G Q+H
Sbjct: 434 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG-QIHCSIE 492
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ + +G+SL+D YA+ + DA +F L ++ +SWNA+I+G+A + AL
Sbjct: 493 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 552
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M + E ++ ++ + +STG + G + I G + +V +
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612
Query: 241 AKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP-N 295
++G + DA + + + W ++L+ C H LG+ + EK+L I P +
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA---EKILE--IEPQD 667
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ T++ + + AG LD+ AL++K
Sbjct: 668 ETTYVLLSNMYAAAGSLDQ----VALLRK 692
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/550 (40%), Positives = 346/550 (62%), Gaps = 7/550 (1%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F +D + +L+ Y C +AR+ FDE+P + V TA+ SGY +N+ +++ LF
Sbjct: 125 FPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFR 184
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDK-FGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
M+ ++++ S + D+ +HA K G++ N V +++LD YA+
Sbjct: 185 AMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAK 244
Query: 142 FDQMD--DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR--EGFEPTHFS 197
D A +F +E ++ VSWN++IA +A+ +A+ +S+ML G + +
Sbjct: 245 GGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVA 303
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
S+V A A G+++ GK +H V++ G + +VG ++VDMY+K G +E A + F ++
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+++++SW++M+TG HG G+ + F +M R+G+ PN +TF+ VL ACSHAGLLDEG+
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 423
Query: 318 YFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++ MK+ G+E HY VDLLGRAG LD A I+EM ++P AA+WGALL ACR+H
Sbjct: 424 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 483
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
KNVEL + +R+FELD +SG ++LL+NIYA A D R R ++K ++K P S
Sbjct: 484 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSS 543
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
E K +++F D +HPQ I+ ++ E++++ GYVP++ VL D++E+E+ L+
Sbjct: 544 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 603
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFR 556
+HSEKLA+AFAL+++ P S IHI KN+RVC DCH+A KF +K+ EREII+RD RFHHF+
Sbjct: 604 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 663
Query: 557 DGFCSCGDYW 566
DG CSC DYW
Sbjct: 664 DGLCSCRDYW 673
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H ++ + +H ++ + ++ + +I++ Y+KCG ++ A + F ++ K++++W
Sbjct: 311 CAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSW 370
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
+A+I+GY + + + A+ +F++M R GL+PN T SVL A S AG D+ GR +A
Sbjct: 371 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDE--GRYWYNAM 428
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
++G + V ++D+ R +D+A+ L ++ K + + W AL++
Sbjct: 429 KQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 341/569 (59%), Gaps = 5/569 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VHA ++ + D+ + N+IL+ Y K G ++ AR +FD M V+D+ +W
Sbjct: 134 CGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSW 193
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++SG+ +N + A +F M R G ++ TL ++L A G D K G+++H + +
Sbjct: 194 NTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACG-DVMDLKVGKEIHGYVV 252
Query: 122 KYGYDWNV---YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G V ++ +S++DMY + + A LF L K+ VSWN+LI+G+ + + +
Sbjct: 253 RNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQ 312
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F M+ G P + SV A +L G V ++V+K G + VG L+
Sbjct: 313 ALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIG 372
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYA GS+ A +VF+ + ++++ + M+TG HG G+ + F +ML G+ P++
Sbjct: 373 MYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGI 432
Query: 299 FLCVLTACSHAGLLDEGQG-YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F VL+ACSH+GL+DEG+ ++ + + + VEP HY VDLLGRAG LD A I M
Sbjct: 433 FTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENM 492
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
++P VW ALL ACR+H+NV+L +A+++FEL+P ++ L+NIYA+ R D
Sbjct: 493 KLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVE 552
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R ++ + ++K P+ S+VE VH F D +H Q I+ K ++++E++K+ GY P
Sbjct: 553 NVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKP 612
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D+S VL +++ +E L HSE+LALAFALI+T PG+TI I KN+RVCGDCH+ K S
Sbjct: 613 DTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMIS 672
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ REII+RD RFHHFRDG CSCG YW
Sbjct: 673 KLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 105/199 (52%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N Y+ + L YA M A +F + KN WN++I G+A + +AL + +ML
Sbjct: 57 NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G +P +F+Y V A E G+ VHA V+ G + +VGN+++ MY K G +E
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVE 176
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A VF+R+L RD+ SWN+M++G ++G + F M R+G ++ T L +L+AC
Sbjct: 177 AARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACG 236
Query: 308 HAGLLDEGQGYFALMKKHG 326
L G+ + ++G
Sbjct: 237 DVMDLKVGKEIHGYVVRNG 255
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLV--AFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
++ +L ++ SL Q +HAHV +GG L ++ L YA G + A+ +F++++
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHV-TTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIV 85
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
++ WNSM+ G A + + + KML G P+ T+ VL AC L + G+
Sbjct: 86 LKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRK 145
Query: 318 YFALMKKHGVEPEE-------AHYVTFVDLLGRAGLLDRAL 351
AL+ G+E + + Y F D+ + DR L
Sbjct: 146 VHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRML 186
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 344/566 (60%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +L + +H + F D + N + AYAKC LD A ++F M K + +W
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI ++QN P ++ LF M+ G+ P++FT+ S+L A A + G+++H F L
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC-ARLKFLRCGKEIHGFML 529
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + ++G SL+ +Y + M +F +E+K+ V WN +I G ++ +AL
Sbjct: 530 RNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALD 589
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
TF +ML G +P + + V A + +L GK VH+ +K+ AFV L+DMYA
Sbjct: 590 TFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYA 649
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E ++ +F+R+ ++D WN ++ G HG G + FE M G P+ TFL
Sbjct: 650 KCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLG 709
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC+HAGL+ EG Y M+ +GV+P+ HY VD+LGRAG L ALK + EMP E
Sbjct: 710 VLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDE 769
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + +W +LL +CR + ++E+G ++++ EL+P+ + ++LL+N+YA G+ ++ + R
Sbjct: 770 PDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVR 829
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MKE+G+ K+ CSW+E V+ F+ +D + + I + W ++ +KI +IGY PD+S
Sbjct: 830 QRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTS 889
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++ + L+ HSEKLA++F L++T G+T+ + KN+R+C DCH+A K SKVV
Sbjct: 890 CVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVV 949
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R+IIVRD RFHHF++G C+CGD+W
Sbjct: 950 KRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 190/380 (50%), Gaps = 14/380 (3%)
Query: 2 CTHLKKLKEARIVHAHILGS-AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C H K + R VHA + S +ND+ + I+ Y+ CG ++R +FD KD+
Sbjct: 102 CGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFL 161
Query: 61 WTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ AL+SGYS+N +AI LF ++L L P+ FTL V KA AG D + G VHA
Sbjct: 162 YNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKAC-AGVADVELGEAVHAL 220
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK G + +VG++L+ MY + ++ A +F + ++N VSWN+++ + +
Sbjct: 221 ALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGEC 280
Query: 180 LRTFSEML---REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
F +L EG P + +V A A+ G + G VH K G V N+L
Sbjct: 281 CGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSL 340
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPN 295
VDMY+K G + +A +F+ ++VVSWN+++ G ++ G + ++M R + N
Sbjct: 341 VDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVN 400
Query: 296 QVTFLCVLTACS--HAGL-LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+VT L VL ACS H L L E GY +HG +E FV + LD A +
Sbjct: 401 EVTVLNVLPACSGEHQLLSLKEIHGY---AFRHGFLKDELVANAFVAAYAKCSSLDCAER 457
Query: 353 FIREMPIEPTAAVWGALLGA 372
M T + W AL+GA
Sbjct: 458 VFCGME-GKTVSSWNALIGA 476
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 5/343 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++ VHA L + +D + N ++ Y KCG ++ A K+F+ M +++V+W
Sbjct: 205 CAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSW 264
Query: 62 TALISGYSQNDQPENAIILFSQML---RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+++ S+N +F ++L GL P+ T+ +V+ A A + + G VH
Sbjct: 265 NSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAA-VGEVRMGMVVHG 323
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G V V +SL+DMY++ + +A LF KN VSWN +I G++++ +
Sbjct: 324 LAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRG 383
Query: 179 ALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
EM RE + +V A + L K +H + + G V N V
Sbjct: 384 VFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFV 443
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
YAK S++ AE+VF + + V SWN+++ AQ+G ++ F M+ +G+ P++
Sbjct: 444 AAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRF 503
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
T +L AC+ L G+ M ++G+E +E ++ + L
Sbjct: 504 TIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSL 546
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/598 (37%), Positives = 352/598 (58%), Gaps = 34/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L+ V+A I S + + M + +++ Y KC +D A++LFDE ++
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ S Y + A+ +F+ M+ G++P++ ++ S + +S + + +G+ H + L
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI-SSCSQLRNILWGKSCHGYVL 364
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
+ G++ + ++L+DMY + FD+M D AW
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTG 209
F + KN VSWN +I+G + S E+A+ F M +EG + S+ +A G
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L+ KW++ ++ K+G QL +G TLVDM+++ G E A +FN L RDV +W + +
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG-YFALMKKHGVE 328
A G + + F+ M+ G+ P+ V F+ LTACSH GL+ +G+ +++++K HGV
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
PE+ HY VDLLGRAGLL+ A++ I +MP+EP +W +LL ACR+ NVE+ AYAAE+
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I L P +G ++LL+N+YASAGR ND A+ R MKE G++K P S ++ + H F +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D++HP+ I E+S++ +G+VPD S+VL D++E+ L HSEKLA+A+ L
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
IS+ G+TI I KN+RVC DCHS KFASKV REII+RD NRFH+ R G CSCGD+W
Sbjct: 785 ISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 194/384 (50%), Gaps = 34/384 (8%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H I+ + D+ +QN++++ YA+CG LD ARK+FDEM +++V+WT++I GY++ D
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
++A+ LF +M+R + PN T+ V+ A A D + G +V+AF G + N +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISAC-AKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+L+DMY + + +D A LF + N NA+ + + R+ +AL F+ M+ G
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P S S ++ + ++ GK H +V+++G + + N L+DMY K + A ++
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM------------------------- 287
F+R+ + VV+WNS++ G ++G A FE M
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 288 -------LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ G+ + VT + + +AC H G LD + + ++K+G++ + T VD+
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 341 LGRAGLLDRALKFIREMPIEPTAA 364
R G + A+ + +A
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSA 538
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 191/401 (47%), Gaps = 19/401 (4%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC---LDEARKLFDEM-PVKDMV 59
+ K + E ++ H + ND++ ++ + G L A+++F+
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT----LSSVLKASGAGATDDKFGRQ 115
+ +LI GY+ + AI+LF +M+ G+ P+++T LS+ K+ G G Q
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN-----GIQ 155
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+H +K GY +++V +SL+ YA ++D A +F + +N VSW ++I G+AR+
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 176 GEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ A+ F M+R E P + V +A A LE G+ V+A + SG ++ + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LVDMY K +I+ A+++F+ ++ N+M + + GL + + F M+ +G+ P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
++++ L +++CS + G+ + ++G E + +D+ + D A +
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
M T W +++ + V+ AA FE P
Sbjct: 396 DRMS-NKTVVTWNSIVAGYVENGEVD----AAWETFETMPE 431
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 342/568 (60%), Gaps = 7/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + + + R + A + S + +D +QN ++N Y+KCG L+ ARK+FD + +D++ W
Sbjct: 173 CSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAW 232
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY++ A+ LF +M KPN T +L A D + GR +H
Sbjct: 233 NTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC-TNLEDLEQGRAIHRKVK 291
Query: 122 KYGYDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++GY+ ++ +G+ LL+MY + +++A +F L +++ ++WN LI + + + + AL
Sbjct: 292 EHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDAL 351
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M E P + S+V +A A G+ QGK VHA + + + N+L++MY
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMY 411
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ GS++D VF + + +VSW++++ AQHG + + F ++L+ G+A + VT +
Sbjct: 412 NRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMV 471
Query: 301 CVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L+ACSH G+L EG Q + +++ HG+ P+ H++ VDLL RAG L+ A I +MP
Sbjct: 472 STLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPF 531
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI-LLANIYASAGRLNDAAR 418
P A W +LL C++H + + A A+++FEL+ D + LL+N+YA AGR +D
Sbjct: 532 LPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV-- 589
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK +K P CS++E + VH FVA D +HP+ +I + + +S+++K GYVPD
Sbjct: 590 -RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPD 648
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
VL ++E+E L HSEKLA+A+ LISTPPG+ +HI KN+R C DCH+A KF S+
Sbjct: 649 MRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISR 708
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V R+I+VRD+ RFHHF +G CSC DYW
Sbjct: 709 IVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 208/386 (53%), Gaps = 7/386 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C+ K LK+ +++HA IL + + DI + ++ YA+C L+ ARK FDEM K +VT
Sbjct: 68 CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127
Query: 61 WTALISGYSQNDQPENAIILFSQMLRL---GLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
W ALI+GYS+N A+ ++ M+ G+KP+ T SS L A D GR++
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSV-VGDISQGREIE 186
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A + GY + V ++L++MY++ ++ A +F L++++ ++WN +I+G+A++
Sbjct: 187 ARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAAT 246
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M +P ++ + TA + LEQG+ +H V + G + +GN L+
Sbjct: 247 QALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLL 306
Query: 238 DMYAK-SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+MY K S S+E+A +VF RL RDV++WN ++ Q+G K + F++M +APN+
Sbjct: 307 NMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNE 366
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+T VL+AC+ G +G+ AL+ + + + +++ R G LD +
Sbjct: 367 ITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAA 426
Query: 357 MPIEPTAAVWGALLGACRMHKNVELG 382
+ + + W L+ A H + G
Sbjct: 427 IR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 173/298 (58%), Gaps = 5/298 (1%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y KCG + +A +F + + V+WT +++ +++N A+ + +M+ GL+P+ +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDG-AM 60
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
V + + D K G+ +HA L+ ++++ +G++L+ MYAR ++ A F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLR---EGFEPTHFSYSSVFTALASTGSLE 212
K V+WNALIAG++R + AL+ + +M+ EG +P ++SS A + G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
QG+ + A + SG + V N L++MY+K GS+E A KVF+RL RDV++WN+M++G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ G + F++M N PN VTF+ +LTAC++ L++G+ +K+HG E +
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 143/304 (47%), Gaps = 16/304 (5%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY + + DA +F A+E N VSW ++A AR +AL + M+ EG P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF---VGNTLVDMYAKSGSIEDAEKVFN 254
+ +S+ L+QG+ +HA ++++ QL+ F +G L+ MYA+ +E A K F+
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILET--QLLEFDIILGTALITMYARCRDLELARKTFD 118
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR---NGIAPNQVTFLCVLTACSHAGL 311
+ K+ +V+WN+++ G +++G + ++ ++ M+ G+ P+ +TF L ACS G
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ +G+ A G + +++ + G L+ A K + A W ++
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIA-WNTMIS 237
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHIL-LANIYASAGRLNDAARAR---KMMKESG 427
+ A E + P+D P+++ + + L D + R + +KE G
Sbjct: 238 G---YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294
Query: 428 VKKE 431
+ +
Sbjct: 295 YESD 298
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/543 (40%), Positives = 328/543 (60%), Gaps = 5/543 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+ M NT++ CG +++A +LF M KD V+W+A+I G +QN + AI F +M
Sbjct: 201 NTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQNGMEKEAIECFREMK 259
Query: 86 RLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
GLK +Q+ SVL A G GA +D GRQ+HA ++ ++YVGS+L+DMY +
Sbjct: 260 IEGLKMDQYPFGSVLPACGGLGAIND--GRQIHACIIRTNLQDHIYVGSALIDMYCKCKC 317
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ A +F ++ KN VSW A++ G+ + +A++ F +M R G +P H++ +A
Sbjct: 318 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISA 377
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+ SLE+G H I +G V N+LV +Y K G I+D+ ++FN + RD VSW
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-K 323
+M++ AQ G ++ F+KM++ G+ P+ VT V++ACS AGL+++GQ YF LM
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN 497
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
++G+ P HY +DL R+G ++ A+ FI MP P A W LL ACR N+E+G
Sbjct: 498 EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGK 557
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AAE + ELDPH + LL++IYAS G+ + A+ R+ MKE V+KEP SW++ K +
Sbjct: 558 WAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKL 617
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F A+D++ P I+ K E+ +KI GY PD+S V ++ + L HSE+LA
Sbjct: 618 HSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLA 677
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LI P G I + KN+RVC DCH+A K S V REI+VRD RFH F+DG CSCG
Sbjct: 678 IAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCG 737
Query: 564 DYW 566
D+W
Sbjct: 738 DFW 740
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 188/377 (49%), Gaps = 41/377 (10%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR-LGL 89
N +L AY+K G L E + F+++P +D VTW LI GYS + A+ ++ M++
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ TL ++LK S + G+Q+H +K G++ + VGS LLDMY++ + DA
Sbjct: 133 NLTRVTLMTMLKLSSSNG-HVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAK 191
Query: 150 FLFTALESKN------------------------------EVSWNALIAGHARKSEGEKA 179
+F L+ +N VSW+A+I G A+ ++A
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEA 251
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM EG + + + SV A G++ G+ +HA +I++ Q +VG+ L+DM
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDM 311
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K + A+ VF+R+ +++VVSW +M+ G Q G V+ F M R+GI P+ T
Sbjct: 312 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTL 371
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKFIR 355
++AC++ L+EG + G+ HY+T V L G+ G +D + +
Sbjct: 372 GQAISACANISSLEEGSQFHGKAITAGL----IHYITVSNSLVTLYGKCGDIDDSTRLFN 427
Query: 356 EMPIEPTAAVWGALLGA 372
EM + + W A++ A
Sbjct: 428 EMNVRDEVS-WTAMVSA 443
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 152/277 (54%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + R +HA I+ + ++ I + + +++ Y KC CL A+ +FD M K++V+W
Sbjct: 277 CGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 336
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ GY Q + A+ +F M R G+ P+ +TL + A A + + G Q H +
Sbjct: 337 TAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISAC-ANISSLEEGSQFHGKAI 395
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + V +SL+ +Y + +DD+ LF + ++EVSW A+++ +A+ +A++
Sbjct: 396 TAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQ 455
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F +M++ G +P + + V +A + G +E+G+ +I G +V G + ++D+
Sbjct: 456 LFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYG-IVPSNGHYSCMIDL 514
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
+++SG IE+A N + + D + W ++L+ C G
Sbjct: 515 FSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG 551
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 176/422 (41%), Gaps = 92/422 (21%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++ ++LL Y++ + + F L ++ V+WN LI G++ A++ ++ M+
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 188 RE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
++ T + ++ +S G + GK +H VIK G + VG+ L+DMY+K G I
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 247 EDAEKVFN------------------------------RLLKRDVVSWNSMLTGCAQHGL 276
DA+KVF R +++D VSW++M+ G AQ+G+
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGM 247
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP------- 329
K + F +M G+ +Q F VL AC G +++G+ A + + ++
Sbjct: 248 EKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSA 307
Query: 330 ---------------------EEAHYVTFVDLL---GRAGLLDRALKFIREMP---IEPT 362
++ + V++ ++ G+ G A+K +M I+P
Sbjct: 308 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPD 367
Query: 363 AAVWGALLGACRMHKNVELG------AYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
G + AC ++E G A A I + +S L +Y G ++D+
Sbjct: 368 HYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNS-----LVTLYGKCGDIDDS 422
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
R + E V+ E SW +A F +A ++ +K+ Q+G
Sbjct: 423 TR---LFNEMNVRDE--VSWTAMVSAYAQFGRAVEA-----------IQLFDKMVQLGLK 466
Query: 477 PD 478
PD
Sbjct: 467 PD 468
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 115/216 (53%), Gaps = 7/216 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L+E H + + + I + N+++ Y KCG +D++ +LF+EM V+D V+W
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++S Y+Q + AI LF +M++LGLKP+ TL+ V+ A +K R
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN 497
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
+YG + S ++D+++R ++++A + + + + W L++ K E
Sbjct: 498 EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIG- 556
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+ +E L E +P H + ++ +++ ++ +GKW
Sbjct: 557 KWAAESLIE-LDPHHPAGYTLLSSIYAS----KGKW 587
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
YS+ G+ K +H ++I++ F+ N +V YA S A +VF+ +
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEG- 315
+ ++ SWN++L ++ G R FEK+ R+G VT+ ++ S +GL+
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDG-----VTWNVLIEGYSLSGLVGAAV 120
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF---IREMPIEPTAAVWGALLGA 372
+ Y +MK +T + L G + + + ++ E V LL
Sbjct: 121 KAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL-- 178
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
M+ V + A + + LD ++ + L + G + DA + + M++ V
Sbjct: 179 -DMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSV 233
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/535 (42%), Positives = 326/535 (60%), Gaps = 3/535 (0%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
L+ Y K G L AR LF EMP +++V W A+++ + +P I + + G PN
Sbjct: 54 LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 113
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
+ + A AGA G Q H F +K G++ +V V +S++D Y + A +F
Sbjct: 114 VSACAFFNAC-AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFD 172
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
+ +N VSW +++A +A+ E+A + R G EPT F SS T A L
Sbjct: 173 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 232
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G+ +HA ++S FV + LVDMY K G +EDAE++F +R++V+WN+M+ G A
Sbjct: 233 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 292
Query: 274 HGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
G + + F+ M+R+G APN +T + V+T+CS GL +G F M+ + G+EP
Sbjct: 293 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT 352
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGRAG+ ++A + I+ MP+ P+ +VWGALLGAC+MH ELG AAE++FE
Sbjct: 353 EHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 412
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
LDP DSG H+LL+N++ASAGR +A RK MK G+KK+P CSWV KN VH+F A D
Sbjct: 413 LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDT 472
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
H I ++ ++++ GY+PD+ + L +++E+E+++ HSEKLALAF LI
Sbjct: 473 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 532
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PPG I I KN+R+C DCH AFKF S +V REIIVRD NRFHHF+ CSCGDYW
Sbjct: 533 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 142/281 (50%), Gaps = 12/281 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L H ++ F+ D+++ N++++ Y KC C +AR +FD M V++ V+W
Sbjct: 123 CAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSW 182
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ Y+QN E A + R G +P F +SS L AG GR +HA +
Sbjct: 183 CSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC-AGLLGLHLGRALHAVAV 241
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D N++V S+L+DMY + ++DA +F +N V+WNA+I G+A + + AL
Sbjct: 242 RSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALL 301
Query: 182 TFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVGNT 235
F +M+R G P + + +V T+ + G + G + + I+ + A V
Sbjct: 302 VFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACV--- 358
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
VD+ ++G E A +V + R +S W ++L C HG
Sbjct: 359 -VDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 398
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARF 142
MLRLGL+PN FT S KA+ + G Q+H+ +++GY + +V + LDMY +
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
++ A LF + ++N V+WNA++ + + + + G P S + F
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
A A L G+ H V+K G ++ V N++VD Y K A VF+ + R+ V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
SW SM+ AQ+G + + R+G P LT C+ L G+ A+
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ ++ VD+ G+ G ++ A + E P + W A++G
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP-QRNLVTWNAMIGG 289
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA + S +I + + +++ Y KCGC+++A ++F E P +++VTW
Sbjct: 224 CAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTW 283
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
A+I GY+ +NA+++F M+R G PN TL +V+ + S G T D +
Sbjct: 284 NAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY-ELFETM 342
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEK 178
++G + + ++D+ R + A+ + + + +S W AL+ A K G+
Sbjct: 343 RERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLG--ACKMHGKT 400
Query: 179 AL-RTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
L R +E L E +P H S++F + G+W A I+
Sbjct: 401 ELGRIAAEKLFE-LDPQDSGNHVLLSNMFAS--------AGRWAEATDIR 441
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/569 (39%), Positives = 341/569 (59%), Gaps = 7/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + +H HIL S +I+++N ++ YAKCG L +++ LF M VKD+V+W
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAF 119
A+I+ Y+ ++A LF +M LG P+ +T SS+L GA A+ + GR +H
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSIL---GACASPKRLEDGRMLHVR 296
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
G+D + + ++L+ M+ R ++ A F ++E K +WN ++A +A+ +G+ A
Sbjct: 297 ITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDA 356
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L + ML EGF P F++SSV + AS G+L +GK++H G + +G LV+M
Sbjct: 357 LFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNM 416
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GS+ DA+K F+ + +DVVSW++M+ AQHG + + M GIA N+VT
Sbjct: 417 YAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTA 476
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
VL ACSH G L EG YF L + G+E +E + V F+DLLGRAG L A + MP
Sbjct: 477 SSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMP 536
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ + LLG C++H +V G +RI L+P + G ++LL N+YA+AGR +D A+
Sbjct: 537 FKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAK 596
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIGYVP 477
R+ M++ GVK++ CS +E ++ ++ F D ++P+ I + + ++K + GYVP
Sbjct: 597 LRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVP 656
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D+ V ++E L+ HSEK+A+ F LI++PPGST+ I KN+RVC DCH+ K AS
Sbjct: 657 DTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLAS 716
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ R IIVRD RFHHF G CSCGDYW
Sbjct: 717 KITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 198/382 (51%), Gaps = 7/382 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
CT L ++E R+V F+ D+ + ++++ +AKCGCL+EA +F M ++D+++
Sbjct: 78 CTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIIS 137
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHA 118
TA+I Y ++ + + A+ + +M GL+P+ FT +++L GA ++ D G+ +H
Sbjct: 138 VTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL---GACSSPDFLLDGKHIHK 194
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L+ + N+ V ++L+ MYA+ + D+ LF ++ K+ VSWNA+IA + +
Sbjct: 195 HILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKD 254
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A F M G P +++SS+ A AS LE G+ +H + G + N L+
Sbjct: 255 AFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLIS 314
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
M+ + GS+E A + F + K+++ +WN+ML AQ GK + ++ ML G P++ T
Sbjct: 315 MFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFT 374
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F V+ +C+ G L EG+ G E + V++ + G L A K +
Sbjct: 375 FSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGIS 434
Query: 359 IEPTAAVWGALLGACRMHKNVE 380
+ + W A++ A H + E
Sbjct: 435 NKDVVS-WSAMIAASAQHGHAE 455
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 186/348 (53%), Gaps = 3/348 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D + N I+ Y KC ++AR++FD + ++ +W+ L+ Y QN + A+ ++ +M+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R + + +TLSSVL A+ D + GR V + G++ +V V +SL+ ++A+ +
Sbjct: 61 RKEISIDAYTLSSVL-AACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119
Query: 146 DDAWFLFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++A +F ++ + ++ +S A+I + R + + AL T+ +M +G EP F+Y+++ A
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+S L GK +H H+++S V N L+ MYAK GS++D++ +F + +DVVSW
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
N+M+ +G K F +M G P+ TF +L AC+ L++G+ +
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G + + A + + R G L+ A ++ + + A W +L A
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGA-WNTMLAA 346
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 123/254 (48%), Gaps = 10/254 (3%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ ++ + ++ MY + +DA +F ++ +N SW+ L+ + + + ++AL + EM+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R+ ++ SSV A +E+G+ V + G + V +L+ ++AK G +E
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+AE VF + RD++S +M+ +HG + + KM G+ P+ T+ +L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVT----FVDLLGRAGLLDRALKFIREMPIEPT 362
S L +G+ + KH +E + ++ + + + G L + M ++
Sbjct: 181 SSPDFLLDGKH----IHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDV 236
Query: 363 AAVWGALLGACRMH 376
+ W A++ A ++
Sbjct: 237 VS-WNAMIAAYTLY 249
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 358/636 (56%), Gaps = 72/636 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L + +HA S F D + +++ + Y KC + +ARKLFD MP +D+V W
Sbjct: 114 CASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVW 173
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQF--------------------------- 94
+A+I+GYS+ E A LF +M G++PN
Sbjct: 174 SAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLV 233
Query: 95 --------TLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----- 141
T+S VL A G D G QVH + +K G + +V S++LDMY +
Sbjct: 234 QGFWPDGSTVSCVLPAVGC-LEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVK 292
Query: 142 -----FDQMDDA---------------WFLFTALESKNE----------VSWNALIAGHA 171
FD++++ + TALE N+ V+W ++IA +
Sbjct: 293 EMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCS 352
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ + +AL F +M G EP + S+ A + +L GK +H ++ G +
Sbjct: 353 QNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVY 412
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
VG+ L+DMYAK G I+ A + F+++ ++VSWN+++ G A HG K T+ F ML++G
Sbjct: 413 VGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSG 472
Query: 292 IAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
P+ VTF CVL+AC+ GL +EG + Y ++ ++HG+EP+ HY V LL R G L+ A
Sbjct: 473 QKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEA 532
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
I+EMP EP A VWGALL +CR+H N+ LG AAE++F L+P + G +ILL+NIYAS
Sbjct: 533 YSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASK 592
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
G ++ R R++MK G++K P SW+E + VHM +A D +HPQ I +K +++ ++
Sbjct: 593 GLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQM 652
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
K+ GY+P ++ VL ++Q++E L HSEKLA+ L++T PG + + KN+R+C DCH
Sbjct: 653 KKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCH 712
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ K S++ REI VRDTNRFHHF+DG CSCGD+W
Sbjct: 713 AVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 174/378 (46%), Gaps = 39/378 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEAR---KLFDEMPVKDMVTWTAL 64
L +AR HA IL +D + ++L+ YA L + L +P + ++++L
Sbjct: 16 LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I ++++ + + FS + L L P+ F L S +K+ + D G+Q+HAF G
Sbjct: 76 IHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDP-GQQLHAFAAASG 134
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + V SSL MY + D++ DA LF + ++ V W+A+IAG++R E+A F
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194
Query: 185 EMLREGFEPTHFSY--------------------------------SSVFTALASTGSLE 212
EM G EP S+ S+V L + G LE
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254
Query: 213 Q---GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
G VH +VIK G FV + ++DMY K G +++ +VF+ + + ++ S N+ LT
Sbjct: 255 DVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLT 314
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
G +++G+ + F K + N VT+ ++ +CS G E F M+ +GVEP
Sbjct: 315 GLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEP 374
Query: 330 EEAHYVTFVDLLGRAGLL 347
+ + G L
Sbjct: 375 NAVTIPSLIPACGNISAL 392
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA- 154
LS L +S A + RQ HA L+ + + +SLL YA + T
Sbjct: 5 LSQCLSSSTASLSQ---ARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLS 61
Query: 155 --LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
L S+++LI AR L TFS + P F S + AS +L+
Sbjct: 62 SHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALD 121
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
G+ +HA SG + V ++L MY K I DA K+F+R+ RDVV W++M+ G +
Sbjct: 122 PGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYS 181
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ GL + F +M G+ PN V++ +L + G DE G F +M G P+
Sbjct: 182 RLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/596 (38%), Positives = 350/596 (58%), Gaps = 36/596 (6%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDMVTWTA 63
K LK+ +HA + + +D + + IL+ A + G + AR LF + D+
Sbjct: 46 KTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANT 105
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
LI Y+ + P +A++ +S+M + P+ T +LKA + + G +H+ K
Sbjct: 106 LIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKAC-SEIPSLRLGEAIHSHVFK 164
Query: 123 YGYDWNVYVGSSLLDMYAR----------FDQMDD---------------------AWFL 151
G+ V V + L+ MYA FD+ + A +
Sbjct: 165 LGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRM 224
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F A+ ++ VSW+ +I G+ ++S ++ L F +M+ E EP + +A A G++
Sbjct: 225 FEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAM 284
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
EQG+W+ ++ + +L +G L+DMY+K GS+E A +VF+++ +++V++W++M+ G
Sbjct: 285 EQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGL 344
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPE 330
A +G GK + F +M G+ PN+VTF+ +L ACSH+ L+DEG +F M +G++P
Sbjct: 345 AINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPN 404
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
H+ VDL GRAG+LD+A I+ MP +P +A+WGALL ACR+H + ELG +R+
Sbjct: 405 AHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLL 464
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
ELDP+ G ++LL+NIYA+ GR + A R+MM+E V K P CS+++ + +H FVA D
Sbjct: 465 ELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGD 524
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
+HPQ MI+ K E+S+++K GY PD+ VL D++E+E L HSEKLA+AF LI
Sbjct: 525 SSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIK 584
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
T PG+TI I KN+RVC DCHSA K SK+ REIIVRD RFHHFRDG CSC D+W
Sbjct: 585 TDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 151/308 (49%), Gaps = 36/308 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA----------------------- 38
C+ + L+ +H+H+ + +++++ N ++ YA
Sbjct: 146 CSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASW 205
Query: 39 --------KCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
KCG AR++F+ MP +D+V+W+ +I+GY Q + + + LF M+ ++
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIE 265
Query: 91 PNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
PN+ L + L A GA + G+ + + + V +G++L+DMY++ ++ A
Sbjct: 266 PNESVLVNALSACAHLGAMEQ--GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERAL 323
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F ++ KN ++W+A+I G A +G+ AL FS+M +G +P ++ + A + +
Sbjct: 324 EVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSK 383
Query: 210 SLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+++G + H+ G + A +VD+Y ++G ++ A+ V + K + W ++
Sbjct: 384 LVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGAL 443
Query: 268 LTGCAQHG 275
L C HG
Sbjct: 444 LNACRIHG 451
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL +++ + + ++ + + + +++ Y+KCG ++ A ++F +M K+++ W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+G + N Q ++A+ LFSQM G+KPN+ T +L A D+ H+
Sbjct: 338 SAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
YG N + ++D+Y R +D A + ++ K N W AL+ H GE
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGE 457
Query: 178 KALRTFSEMLREGFEPTH----FSYSSVFTALASTGSLEQGKWV--HAHVIKSGGQLVAF 231
+ + E+ +P H S+++ A + + + + V K+ G
Sbjct: 458 QVGKRLLEL-----DPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFID 512
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRL 256
+G+T+ + A S E ++ +L
Sbjct: 513 LGDTIHEFVAGDSSHPQLEMIYAKL 537
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 336/553 (60%), Gaps = 37/553 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH I+ + F + +Q+ +++ YAKCG L A+++ + M D+V+W ++I G ++
Sbjct: 337 VHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGF 396
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E AI+LF +M +K + +T SVL G D G+ VH +K G++ V +
Sbjct: 397 EEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRID---GKSVHCLVIKTGFENYKLVSN 453
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+L+DMYA+ + ++ A+ +F + K+ +SW +L+ G+ + E++L+TF +M G P
Sbjct: 454 ALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSP 513
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F +S+ +A A LE GK VH+ IK G + V N+LV MYAK G ++DA+ +F
Sbjct: 514 DQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIF 573
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ RDV++W +++ G A++G G+ ++++F++M
Sbjct: 574 VSMHVRDVITWTALIVGYARNGKGRDSLKYFQQM-------------------------- 607
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
K +G+EP HY +DL GR G LD A + + +M ++P A VW ALL AC
Sbjct: 608 --------KKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAAC 659
Query: 374 RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPA 433
R+H N+ELG AA +FEL+P ++ P+++L+N+Y +A + +DAA+ R++MK G+ KEP
Sbjct: 660 RVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPG 719
Query: 434 CSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREA 493
CSW+E + +H F++ D HP+ A I+ K EI +IK++GYVPD + L D++ +EA
Sbjct: 720 CSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEA 779
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSEKLA+AF L+++PPG+ I I KN+RVCGDCHSA K+ S V R II+RD+N FH
Sbjct: 780 GLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFH 839
Query: 554 HFRDGFCSCGDYW 566
HF++G CSC DYW
Sbjct: 840 HFKEGECSCEDYW 852
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 183/342 (53%), Gaps = 6/342 (1%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++ YA G L EAR+LF+ + +TW++LISGY + + A LF +M G K
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQK 209
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+Q+TL S+L+ A K G +H + +K G++ NVYV + L+DMYA+ + +A
Sbjct: 210 PSQYTLGSILRGCSALGLIQK-GEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEI 268
Query: 151 LFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
LF L N V W A++ G+A+ + KA+ F M EG E F++ S+ TA +S
Sbjct: 269 LFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSV 328
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
+ G+ VH ++++G A+V + LVDMYAK G + A++V + DVVSWNSM+
Sbjct: 329 SAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMI 388
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
GC +HG + + F+KM + + TF VL C G +D G+ L+ K G E
Sbjct: 389 VGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCI-VGRID-GKSVHCLVIKTGFE 446
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ VD+ + L+ A +M E W +L+
Sbjct: 447 NYKLVSNALVDMYAKTEDLNCAYAVFEKM-FEKDVISWTSLV 487
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 196/450 (43%), Gaps = 60/450 (13%)
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGA------TDDKFGRQVHAFCLKYGYDWNVYV 131
+ILF+ L L L P + +S+ L + + +DD +QV + Y +++
Sbjct: 61 LILFT--LSLFLIPLGYYISTALSVLLSASPSLNEDSDDTGVQQVVMHNIADSYQ-SIFH 117
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA-------------------------- 165
+ LL+ ++ Q+DDA LF + ++E +WN
Sbjct: 118 SNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSS 177
Query: 166 -----LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
LI+G+ R +A F M EG +P+ ++ S+ ++ G +++G+ +H +
Sbjct: 178 ITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGY 237
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL--KRDVVSWNSMLTGCAQHGLGK 278
V+K+G + +V LVDMYAK I +AE +F L K + V W +M+TG AQ+G
Sbjct: 238 VVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDH 297
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV 338
+ +F M G+ NQ TF +LTACS G+ + ++G V
Sbjct: 298 KAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALV 357
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH----KNVELGAYAAERIFELDP 394
D+ + G L A + + M + + W +++ C H + + L R ++D
Sbjct: 358 DMYAKCGDLGSAKRVLENMEDDDVVS-WNSMIVGCVRHGFEEEAILLFKKMHARNMKID- 415
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA-VHMFVANDDAH 453
H + P +L I GR+ D ++ ++G + S NA V M+ +D +
Sbjct: 416 HYTFPSVLNCCI---VGRI-DGKSVHCLVIKTGFENYKLVS-----NALVDMYAKTEDLN 466
Query: 454 PQRAMIHKKWRE--ISEKIKQIGYVPDSSH 481
A+ K + + IS GY + SH
Sbjct: 467 CAYAVFEKMFEKDVISWTSLVTGYTQNGSH 496
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/535 (42%), Positives = 326/535 (60%), Gaps = 3/535 (0%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
L+ Y K G L AR LF EMP +++V W A+++ + +P I + + G PN
Sbjct: 161 LDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNV 220
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
+ + A AGA G Q H F +K G++ +V V +S++D Y + A +F
Sbjct: 221 VSACAFFNAC-AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFD 279
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
+ +N VSW +++A +A+ E+A + R G EPT F SS T A L
Sbjct: 280 GMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G+ +HA ++S FV + LVDMY K G +EDAE++F +R++V+WN+M+ G A
Sbjct: 340 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 399
Query: 274 HGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEE 331
G + + F+ M+R+G APN +T + V+T+CS GL +G F M+ + G+EP
Sbjct: 400 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT 459
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGRAG+ ++A + I+ MP+ P+ +VWGALLGAC+MH ELG AAE++FE
Sbjct: 460 EHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 519
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
LDP DSG H+LL+N++ASAGR +A RK MK G+KK+P CSWV KN VH+F A D
Sbjct: 520 LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDT 579
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
H I ++ ++++ GY+PD+ + L +++E+E+++ HSEKLALAF LI
Sbjct: 580 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 639
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PPG I I KN+R+C DCH AFKF S +V REIIVRD NRFHHF+ CSCGDYW
Sbjct: 640 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 159/340 (46%), Gaps = 2/340 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++N Y+K A P +V++TA ISG +Q+ +P A+ F+ MLRLGL+PN
Sbjct: 57 LVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPN 116
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFL 151
FT S KA+ + G Q+H+ +++GY + +V + LDMY + ++ A L
Sbjct: 117 DFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHL 176
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + ++N V+WNA++ + + + + G P S + F A A L
Sbjct: 177 FGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYL 236
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
G+ H V+K G ++ V N++VD Y K A VF+ + R+ VSW SM+
Sbjct: 237 SLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAY 296
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
AQ+G + + R+G P LT C+ L G+ A+ + ++
Sbjct: 297 AQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANI 356
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
VD+ G+ G ++ A + E P + W A++G
Sbjct: 357 FVASALVDMYGKCGCVEDAEQIFYETP-QRNLVTWNAMIG 395
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 142/281 (50%), Gaps = 12/281 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L H ++ F+ D+++ N++++ Y KC C +AR +FD M V++ V+W
Sbjct: 230 CAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSW 289
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ Y+QN E A + R G +P F +SS L AG GR +HA +
Sbjct: 290 CSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC-AGLLGLHLGRALHAVAV 348
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D N++V S+L+DMY + ++DA +F +N V+WNA+I G+A + + AL
Sbjct: 349 RSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALL 408
Query: 182 TFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVGNT 235
F +M+R G P + + +V T+ + G + G + + I+ + A V
Sbjct: 409 VFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACV--- 465
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
VD+ ++G E A +V + R +S W ++L C HG
Sbjct: 466 -VDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 505
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA + S +I + + +++ Y KCGC+++A ++F E P +++VTW
Sbjct: 331 CAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTW 390
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
A+I GY+ +NA+++F M+R G PN TL +V+ + S G T D +
Sbjct: 391 NAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY-ELFETM 449
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEK 178
++G + + ++D+ R + A+ + + + +S W AL+ A K G+
Sbjct: 450 RERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLG--ACKMHGKT 507
Query: 179 AL-RTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
L R +E L E +P H S++F + G+W A I+
Sbjct: 508 ELGRIAAEKLFE-LDPQDSGNHVLLSNMFAS--------AGRWAEATDIR 548
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 337/556 (60%), Gaps = 5/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ S +D + + +++ Y K G ++A++LFDEMP KD+V+W +L+SG S
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143
Query: 74 PENAIILFSQM-LRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ F +M G +PN+ TL SV+ A + GA D+ G+ +H +K G V
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE--GKSLHGVVVKLGMSGKAKV 201
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+SL++MY + +D A LF + ++ VSWN+++ H EK + F+ M R G
Sbjct: 202 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 261
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + ++ A TG Q + +HA++ + G + L+++YAK G + +E
Sbjct: 262 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 321
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F + RD ++W +ML G A H G+ ++ F+ M++ G+ + VTF +L+ACSH+GL
Sbjct: 322 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 381
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++EG+ YF +M + + VEP HY VDLLGR+G L+ A + I+ MP+EP++ VWGALL
Sbjct: 382 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GACR++ NVELG AE++ LDP D +I+L+NIY++AG DA++ R +MKE + +
Sbjct: 442 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 501
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CS++E N +H FV D HP+ IH K E+ KI++ G P + VL D++
Sbjct: 502 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 561
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ + HSEKLA+AF L+ T G + I KN+R+CGDCHS KFAS + +R II+RD+
Sbjct: 562 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 621
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF DG CSC DYW
Sbjct: 622 RFHHFADGLCSCRDYW 637
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 186/334 (55%), Gaps = 22/334 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E + +H ++ + N+++N Y K G LD A +LF+EMPV+ +V+W
Sbjct: 174 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 233
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ---VHA 118
+++ ++ N E + LF+ M R G+ P+Q T+ ++L+A TD GRQ +HA
Sbjct: 234 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA----CTDTGLGRQAESIHA 289
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ + G++ ++ + ++LL++YA+ +++ + +F ++ ++ ++W A++AG+A + G +
Sbjct: 290 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGRE 349
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK---WVHAHVIKSGGQLVAFVGNT 235
A++ F M++EG E H +++ + +A + +G +E+GK + + V + +L + +
Sbjct: 350 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SC 407
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNG 291
+VD+ +SG +EDA ++ + ++ W ++L C +G LGK E++L
Sbjct: 408 MVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVA---EQLL--S 462
Query: 292 IAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ P + ++ + S AGL + ALMK+
Sbjct: 463 LDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKE 496
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A++S S+ +HA VIKS F+G+ LV MY K G EDA+++F+ + +
Sbjct: 67 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 126
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
D+VSWNS+++G + G A + F +M +G PN+VT L V++AC+ G LDEG+
Sbjct: 127 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 186
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ K G+ + + +++ G+ G LD A + EMP+ + W +++
Sbjct: 187 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMV 237
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/528 (41%), Positives = 338/528 (64%), Gaps = 7/528 (1%)
Query: 45 EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG 104
+AR+ FDE+P + V TA+ SGY +N+ +++ LF M+ ++++ S
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 105 AGATDDK-FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD--DAWFLFTALESKNEV 161
+ D+ +HA K G++ N V +++LD YA+ D A +F +E ++ V
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVV 120
Query: 162 SWNALIAGHARKSEGEKALRTFSEMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
SWN++IA +A+ +A+ +S+ML G + + S+V A A G+++ GK +H
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
V++ G + +VG ++VDMY+K G +E A + F ++ +++++SW++M+TG HG G+
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFV 338
+ F +M R+G+ PN +TF+ VL ACSHAGLLDEG+ ++ MK+ G+E HY V
Sbjct: 241 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 300
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
DLLGRAG LD A I+EM ++P AA+WGALL ACR+HKNVEL + +R+FELD +SG
Sbjct: 301 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSG 360
Query: 399 PHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAM 458
++LL+NIYA AG D R R ++K ++K P S E K +++F D +HPQ
Sbjct: 361 YYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIE 420
Query: 459 IHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIH 518
I+ ++ E++++ GYVP++ VL D++E+E+ L++HSEKLA+AFAL+++ P S IH
Sbjct: 421 IYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIH 480
Query: 519 IKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+RVC DCH+A KF +K+ EREII+RD RFHHF+DG CSC DYW
Sbjct: 481 IIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 158/268 (58%), Gaps = 10/268 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGC--LDEARKLFDEMPVKDMVTWTALISGYSQN 71
+HA I F+ + + NT+L++YAK G L+ ARK+FD M +D+V+W ++I+ Y+QN
Sbjct: 74 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQN 132
Query: 72 DQPENAIILFSQMLRL--GLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWN 128
AI L+S+ML + G+K N LS+VL A AGA + G+ +H ++ G + N
Sbjct: 133 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAI--QTGKHIHNQVVRMGLEEN 190
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
VYVG+S++DMY++ +++ A F ++ KN +SW+A+I G+ G++AL F+EM R
Sbjct: 191 VYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKR 250
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P + ++ SV A + G L++G+ W +A + G + +VD+ ++G ++
Sbjct: 251 SGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLD 310
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+A + + +K D W ++L+ C H
Sbjct: 311 EAYSLIKEMKVKPDAAIWGALLSACRIH 338
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H ++ + +H ++ + ++ + +I++ Y+KCG ++ A + F ++ K++++W
Sbjct: 166 CAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSW 225
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
+A+I+GY + + + A+ +F++M R GL+PN T SVL A S AG D+ GR +A
Sbjct: 226 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDE--GRYWYNAM 283
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
++G + V ++D+ R +D+A+ L ++ K + + W AL++
Sbjct: 284 KQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 334
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 341/568 (60%), Gaps = 7/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + + R + A + S + +D +QN ++N Y+KCG L+ ARK+FD + +D++ W
Sbjct: 173 CTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAW 232
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY++ A+ LF +M KPN T +L A D + GR +H
Sbjct: 233 NTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC-TNLEDLEQGRAIHRKVR 291
Query: 122 KYGYDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ GY+ ++ +G+ LL+MY + +++A +F + +++ ++WN LI + + + + AL
Sbjct: 292 EDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDAL 351
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M E P + S+V +A A G+ QGK VHA + + + N+L++MY
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMY 411
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ GS++D VF + + +VSW++++ AQHG + + F ++L+ G+A + VT +
Sbjct: 412 NRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMV 471
Query: 301 CVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L+ACSH G+L EG Q + +++ HG+ P+ H++ VDLL RAG L+ A I +MP
Sbjct: 472 STLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPF 531
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI-LLANIYASAGRLNDAAR 418
P A W +LL C++H + + A A+++FEL+ D + LL+N+YA AGR +D
Sbjct: 532 LPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV-- 589
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK +K P CS++E + VH FVA D +HP+ +I + + +S+++K GYVPD
Sbjct: 590 -RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPD 648
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
VL ++E+E L HSEKLA+A+ LISTPPG+ +HI KN+R C DCH+A KF S+
Sbjct: 649 MRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISR 708
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V R+I+VRD+ RFHHF +G CSC DYW
Sbjct: 709 IVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 208/386 (53%), Gaps = 7/386 (1%)
Query: 2 CTHLKKLKEARIVHAHILGS-AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C+ K LK+ +++HA IL + + DI + ++ YA+C L+ ARK FDEM K +VT
Sbjct: 68 CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127
Query: 61 WTALISGYSQNDQPENAIILFSQMLRL---GLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
W ALI+GYS+N A+ ++ M+ G+KP+ T SS L A D GR++
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTV-VGDISQGREIE 186
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A + GY + V ++L++MY++ ++ A +F L++++ ++WN +I+G+A++
Sbjct: 187 ARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAAT 246
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F M +P ++ + TA + LEQG+ +H V + G + +GN L+
Sbjct: 247 QALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLL 306
Query: 238 DMYAK-SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+MY K S S+E+A +VF R+ RDV++WN ++ Q+G K + F++M +APN+
Sbjct: 307 NMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNE 366
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+T VL+AC+ G +G+ AL+ + + + +++ R G LD +
Sbjct: 367 ITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAA 426
Query: 357 MPIEPTAAVWGALLGACRMHKNVELG 382
+ + + W L+ A H + G
Sbjct: 427 IR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 171/298 (57%), Gaps = 5/298 (1%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y KCG + +A +F + + V+WT +++ +++N A+ + +M+ GL+P+ +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDG-AM 60
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
V + + D K G+ +HA L+ ++++ +G++L+ MYAR ++ A F +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLR---EGFEPTHFSYSSVFTALASTGSLE 212
K V+WNALIAG++R + AL+ + +M+ EG +P ++SS A G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
QG+ + A + SG + V N L++MY+K GS+E A KVF+RL RDV++WN+M++G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ G + F++M N PN VTF+ +LTAC++ L++G+ +++ G E +
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 143/304 (47%), Gaps = 16/304 (5%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY + + DA +F A+E N VSW ++A AR +AL + M+ EG P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF---VGNTLVDMYAKSGSIEDAEKVFN 254
+ +S+ L+QG+ +HA ++++ +L+ F +G L+ MYA+ +E A K F+
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILET--RLLEFDIILGTALITMYARCRDLELARKTFD 118
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR---NGIAPNQVTFLCVLTACSHAGL 311
+ K+ +V+WN+++ G +++G + ++ ++ M+ G+ P+ +TF L AC+ G
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ +G+ A G + +++ + G L+ A K + A W ++
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIA-WNTMIS 237
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHIL-LANIYASAGRLNDAARAR---KMMKESG 427
+ A E + P+D P+++ + + L D + R + ++E G
Sbjct: 238 G---YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294
Query: 428 VKKE 431
+ +
Sbjct: 295 YESD 298
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/542 (41%), Positives = 320/542 (59%), Gaps = 10/542 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D N +L Y + ++ A F++MPVKD+ +W LISG++QN Q + A LFS M
Sbjct: 135 DSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM- 193
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
P + +S SG D G +V V +++L Y +F ++
Sbjct: 194 -----PEKNGVSWSAMISGYVEHGDL--EAAEELYKNVGMK-SVVVETAMLTGYMKFGKV 245
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A +F + KN V+WN++IAG+ E L+ F M+ P S SSV
Sbjct: 246 ELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGC 305
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++ +L G+ +H V KS +L+ MY K G ++ A K+F + ++DV+SWN
Sbjct: 306 SNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWN 365
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M++G AQHG G+ + F+KM + P+ +TF+ V+ AC+HAG +D G YF MKK
Sbjct: 366 AMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKE 425
Query: 326 -GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+E + HY +DLLGRAG LD A+ I+EMP +P AA++G LLGACR+HKN++L +
Sbjct: 426 FGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEF 485
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA + LDP + ++ LANIYA+ + + A+ RKMMKE V K P SW+E K+ H
Sbjct: 486 AARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTH 545
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F ++D HP+ IHKK E+ K+K GYVPD L +++ +E L HSEKLA+
Sbjct: 546 EFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAI 605
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF L+ T PG+ I + KN+RVCGDCH A KF S + +REIIVRDT RFHHFR+GFCSCGD
Sbjct: 606 AFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGD 665
Query: 565 YW 566
YW
Sbjct: 666 YW 667
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L R +H + S D ++++ Y KCG LD A KLF EMP KD+++W
Sbjct: 305 CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISW 364
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ A+ LF +M +KP+ T +V+ A D + +
Sbjct: 365 NAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
++G + + ++D+ R ++D+A L + K + + G R
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACR 475
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/566 (39%), Positives = 346/566 (61%), Gaps = 1/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + E +I+HA ++ ++ + N ++ YAK G + EA+K+F MP +D VTW
Sbjct: 343 CSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTW 402
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++ +++P+ A+ F M G+ N T+S+VL A A + G +HAF +
Sbjct: 403 NALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFII 462
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + YV +SL+ MYA+ ++ + +F L SKN +WNA++A +A E+AL+
Sbjct: 463 LTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALK 522
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EM R G FS+S A A LE+G+ +H +K G FV + +DMY
Sbjct: 523 FLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYG 582
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+D ++ R + R +SWN + + ++HG + F +M+ G+ P+ VTF+
Sbjct: 583 KCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVS 642
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSH G+++EG Y+ +++K+ G+ + H V +DLLGR+G A FI+EMP+
Sbjct: 643 LLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVS 702
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PT VW +LL AC+ H N+ELG A E + +LDP D ++L +NI A+ G+ D + R
Sbjct: 703 PTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIR 762
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ M + +KK+PACSWV+ KN + +F D +HPQ + I+ K E+ + IK+ GY+PD S
Sbjct: 763 RQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDIS 822
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L D++++E L HSE+LALA+ LIS+P GST+ I KN+RVCGDCHS +KFAS ++
Sbjct: 823 YALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGIL 882
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+I++RD RFH F G CSC DYW
Sbjct: 883 GRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 8/410 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E VH I+ +D+ + ++++ Y G +A K+F EM K++V+WTAL+
Sbjct: 46 LIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVA 105
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y +P + ++ +M G+ N T+SSV+ ++ ++ G QV +KYG +
Sbjct: 106 YVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVI-STCVSLENELLGYQVLGHVIKYGLET 164
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV V +SL+ M+ F +++A ++F+ ++ + +SWN++IA + R +++LR FS M
Sbjct: 165 NVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMF 224
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R E + S++ S +L+ G+ +H+ V+K G NTL+ MY+ +G E
Sbjct: 225 RVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCE 284
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
DAE VF ++++D++SWNSM+ AQ G ++ M N VTF L ACS
Sbjct: 285 DAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACS 344
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
EG+ AL+ G+ V L ++GL+ A K + MP + W
Sbjct: 345 DPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWN 403
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGP--HILLANIYASAGRLND 415
AL+G H + E A + F+L + P +I ++N+ + ND
Sbjct: 404 ALIGG---HADSE-EPDEALKAFKLMREEGVPINYITISNVLGACLAPND 449
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 197/379 (51%), Gaps = 9/379 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + LK R +H+ +L + +++ NT++ Y+ G ++A +F M KDM++W
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHA 118
++++ Y+Q+ +A+ L + M + N T +S L A +D +F G+ +HA
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSAL----AACSDPEFATEGKILHA 357
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G NV VG++L+ +YA+ M +A +F + ++ V+WNALI GHA E ++
Sbjct: 358 LVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDE 417
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTA-LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL+ F M EG + + S+V A LA LE G +HA +I +G Q +V N+L+
Sbjct: 418 ALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLI 477
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MYAK G + + +F+RL ++ +WN+M+ A HG + +++ +M R G+ ++
Sbjct: 478 TMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEF 537
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+F L A + +L+EGQ L K G + +D+ G+ G +D L+ I
Sbjct: 538 SFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPR- 596
Query: 358 PIEPTAAVWGALLGACRMH 376
PI + W L + H
Sbjct: 597 PINRSRLSWNILTSSFSRH 615
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 186/351 (52%), Gaps = 4/351 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ V H++ + ++++ N++++ + G ++EA +F M D ++W
Sbjct: 141 CVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFC 120
++I+ Y +N + ++ FS M R+ + N TLS++L +G G+ D+ K+GR +H+
Sbjct: 201 NSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML--AGCGSVDNLKWGRGIHSLV 258
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK+G++ NV ++L+ MY+ + +DA +F + K+ +SWN+++A +A+ AL
Sbjct: 259 LKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDAL 318
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ + M + +++S A + +GK +HA VI G VGN LV +Y
Sbjct: 319 KLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLY 378
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSG + +A+KVF + KRD V+WN+++ G A ++ F+ M G+ N +T
Sbjct: 379 AKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITIS 438
Query: 301 CVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
VL AC + LL+ G A + G + +E + + + + G L+ +
Sbjct: 439 NVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSS 489
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 2/309 (0%)
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
+SG+ + ++ F++M G+KP+ ++S++ A G QVH F +K G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+V+VG+SL+ +Y + DA +F + KN VSW AL+ + E + +
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M EG + SSV + S + G V HVIK G + V N+L+ M+ G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+E+A VF+ + + D +SWNSM+ ++GL K ++R F M R N T +L
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
C L G+G +L+ K G T + + AG + A + + + +E
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDA-ELVFQGMVEKDMI 299
Query: 365 VWGALLGAC 373
W +++ AC
Sbjct: 300 SWNSMM-AC 307
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/597 (37%), Positives = 363/597 (60%), Gaps = 39/597 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C K KE + +H H+L F DI + ++++ YA+ G L++ARK
Sbjct: 99 CAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSY 158
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-GL 89
LFDE+P KD+V+W A+ISGY + + A+ LF +M+ + +
Sbjct: 159 TALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNV 218
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+P++ T+ +V+ A A + + GR VH++ +G+ N+ + ++L+D+Y++F +++ A
Sbjct: 219 RPDESTMVTVVSAC-AQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETAC 277
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF L +K+ +SWN LI G+ + ++AL F EMLR G P + S+ A A G
Sbjct: 278 ELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 337
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGN---TLVDMYAKSGSIEDAEKVFNRLL-KRDVVSWN 265
+++ G+W+H ++ K +V V + +L+DMYAK G I+ A++VF+ + R + +WN
Sbjct: 338 AIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWN 397
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKK 324
+M++G A HG A F +M NGI P+ +TF+ +L+ACSH+G+LD G+ F ++ +
Sbjct: 398 AMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRG 457
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ + P+ HY +DLLG +GL A + I MP+EP +W +LL AC++H N+ELG
Sbjct: 458 YEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 517
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE-PACSWVETKNAV 443
A+++ +++P +SG ++LL+NIYA+AGR N+ A+ R ++ + G+KK+ P CS +E + V
Sbjct: 518 FAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVV 577
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F+ D HPQ I+ E+ +++ G+VPD+S VL +++ RE L+ HSEKLA
Sbjct: 578 HEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLA 637
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
+AF LIST PG+ + I KN+RVC +CH A K SK+ +REII RD RF HFRDG C
Sbjct: 638 IAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 204/426 (47%), Gaps = 41/426 (9%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD---EARKLFDEMPVKDMVTWTALISG 67
R +HA ++ + N + +L D A +FD + +++ W + G
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
++ + P +A+ L+ M+ LGL P+ +T +LK S A + K G+Q+H LK G+D
Sbjct: 64 HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLK-SCAKSKIRKEGQQIHGHVLKLGFDL 122
Query: 128 NVYVGSSLLDMYARFDQMDD-------------------------------AWFLFTALE 156
++YV +SL+ MYA+ +++D A LF +
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSE-MLREGFEPTHFSYSSVFTALASTGSLEQGK 215
K+ VSWNA+I+G+ ++AL F E M+ P + +V +A A + S+E G+
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
VH+ + G + N L+D+Y+K G +E A ++F+ L +DV+SWN+++ G
Sbjct: 243 HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK--HGVEPEEAH 333
L K + F++MLR+G PN VT L +L AC+H G +D G+ + K GV +
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362
Query: 334 YVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH--KNVELGAYAAERIF 390
T +D+ + G +D A + + + W A++ MH N ++ R+
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422
Query: 391 ELDPHD 396
++P D
Sbjct: 423 GIEPDD 428
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/568 (38%), Positives = 340/568 (59%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + L+ + V I ++F+ D+ + ++ YA+C + A ++F M K+++TW
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+ ++ + A+ F M + G+ PN+ T S+L + ++ R +H
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR-IHLLIT 239
Query: 122 KYGYDWNVYVGSSLLDMYARFD--QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++G D + ++L+++Y R + ++D A + ++ + +WN LI G+ +A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L T+ + E ++ SV A S+ SL +GK +H++ ++ G V N L +M
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K GS+E+A ++F+ + R VSWN ML AQHG + ++ KM + G+ N +TF
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL++CSHAGL+ EG YF +L G+E + HY VDLLGRAG L A K+I +MP
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
EP W +LLGACR+HK+++ G AA ++ ELDP +S ++L+NIY+ G +AA+
Sbjct: 480 SEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAK 539
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ M VKK P S ++ KN VH F D +HP+ A I+ K E+ +++ GYVPD
Sbjct: 540 LRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD 599
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ VL D++++E+ L HSEKLA+AF LISTP S++HI KN+RVC DCH+A KF SK
Sbjct: 600 TKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISK 659
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ REI+VRD +RFHHFRDG CSC DYW
Sbjct: 660 ITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 192/375 (51%), Gaps = 4/375 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L++ + +H+ + S D+ + ++N Y KCG L +ARK+FD MP + + TW ++IS
Sbjct: 26 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 85
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS +++ A +F +M G + ++ T S+L A + + G+ V + ++
Sbjct: 86 YSISERSGEAFFIFQRMQHEGERCDRVTFLSILDAC-VNPENLQHGKHVRESISETSFEL 144
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++VG++L+ MYAR ++A +F ++ KN ++W+A+I A +ALR F M
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQ 204
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK--SGS 245
+EG P ++ S+ + LE+ +H + + G + N LV++Y + +G
Sbjct: 205 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGE 264
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ AE + + ++ + +WN ++ G HG + + ++++ I ++VTF+ VL A
Sbjct: 265 LDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNA 324
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C+ + L EG+ + + G++ + ++ + G ++ A + MPI +A
Sbjct: 325 CTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVS 383
Query: 366 WGALLGACRMHKNVE 380
W +L A H E
Sbjct: 384 WNGMLQAYAQHGESE 398
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 193/424 (45%), Gaps = 27/424 (6%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
ML G+K N T +VL S + G+ +H+ + + +V+V ++L++ Y +
Sbjct: 1 MLLEGVKANVITFLNVLN-SVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCG 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ DA +F + ++ +WN++I+ ++ +A F M EG ++ S+
Sbjct: 60 SLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILD 119
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A + +L+ GK V + ++ +L FVG L+ MYA+ S E+A +VF R+ ++++++
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W++++T A HG +R+F M + GI PN+VTF+ +L + L+E L+
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239
Query: 324 KHGVEPEEAHYVTFVDLLGR--AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+HG++ V++ GR G LD A ++EM E W L+ +H
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGYTLHGRSRE 298
Query: 382 GAYAAERI-FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE--------- 431
+R+ E P D I + N S+ L + E G+ +
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358
Query: 432 --PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
C +E NA +F D+ P R+ + W + + Q G +S VL +
Sbjct: 359 MYSKCGSME--NARRIF----DSMPIRSAV--SWNGMLQAYAQHG---ESEEVLKLIRKM 407
Query: 490 EREA 493
E+E
Sbjct: 408 EQEG 411
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/541 (40%), Positives = 327/541 (60%), Gaps = 13/541 (2%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++ YAKCG ++ AR LFD M D+VT+ ALISGYS N +++ LF +++ +GL+P+
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321
Query: 93 QFTLSSVLKASGAGATDDKFGRQ-----VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
TL +++ FG + +HA +K G D N V ++L +Y RF+ MD
Sbjct: 322 SSTLVALIP------VHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDS 375
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A F A+ K SWNA+I+G+A+ E A+ F +M P + SS +A A
Sbjct: 376 ARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQ 435
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+L GKWVH + +L +V L+DMY K GSI +A +F+ + ++VVSWN M
Sbjct: 436 LGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVM 495
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHG 326
++G HG G ++ ++ M+ + P TFL VL ACSH GL+ EG F ++ +G
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYG 555
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA-AVWGALLGACRMHKNVELGAYA 385
+ P H VDLLGRAG L A + I E P +WGALLGAC +HK+ +L A
Sbjct: 556 ITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLA 615
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
++++FEL+P ++G ++LL+N+Y S + ++AA R+ K + K P C+ +E + H+
Sbjct: 616 SQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHV 675
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F+A D AHPQ I+ +++ K+ + GY PD+ L +++E+E ++VHSEKLA+A
Sbjct: 676 FMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIA 735
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F L++T PG+ I I KN+RVC DCH+A K SKV +R I+VRD +RFHHFRDG CSCGDY
Sbjct: 736 FGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDY 795
Query: 566 W 566
W
Sbjct: 796 W 796
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 172/340 (50%), Gaps = 6/340 (1%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +HA + S F D + + + Y ++ARK+FD +P D V W L++G S +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202
Query: 72 DQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ A+ F +M G ++P+ TL+SVL A+ A + GR VHAF K G + +
Sbjct: 203 E----ALEAFVRMAGAGSVRPDSTTLASVLPAA-AEVANTTMGRCVHAFGEKCGLAQHEH 257
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V + L+ +YA+ M+ A LF +E + V++NALI+G++ ++ F E++ G
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P+ + ++ + G +HAHV+K+G A V L +Y + ++ A
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+ F+ + ++ + SWN+M++G AQ+GL + V F++M + PN +T L+AC+ G
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
L G+ ++ +E +D+ + G + A
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEA 477
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/568 (39%), Positives = 335/568 (58%), Gaps = 14/568 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C H K H H+L +++ Y+KCG ++ AR LFD M D+V
Sbjct: 232 RCVHSFAEKCGLAEHEHVL-----------TGLISLYSKCGDVESARCLFDMMEKPDLVA 280
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ ALISGYS N +++ LF++++ LGL PN TL +++ D + +H F
Sbjct: 281 YNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFG-HDLLAQCLHGFV 339
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK G+ N V +++ ++ R + M+ A F + K SWNA+I+G+A+ E A+
Sbjct: 340 LKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAV 399
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M++ P + SS +A A G+L GKW+H + + + +V L+DMY
Sbjct: 400 ALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMY 459
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK GSI +A ++FN + ++VVSWN+M+ G HG G ++ ++ ML + P TFL
Sbjct: 460 AKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFL 519
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL ACSH GL++EG F ++ + + P H VDLLGRAG L A + I E P
Sbjct: 520 SVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 579
Query: 360 EPTA-AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
VWGALLGAC +HK+ +L A++++FELDP +SG ++LL+N++ S + ++AA
Sbjct: 580 SAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAV 639
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ K + K P + +E N H+F+A D AHPQ I+ +++ K+ + GY P+
Sbjct: 640 VRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPE 699
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ L +++E+E ++VHSEKLA+AF L+ST PG+ I I KN+RVC DCH+A KF SK
Sbjct: 700 TEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISK 759
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V +R I+VRD +RFHHFRDG CSCGDYW
Sbjct: 760 VTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 173/335 (51%), Gaps = 7/335 (2%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLK 101
+D ARK+FD +P D V W L++G S ++ E+ F++M+ G ++P+ TL+SVL
Sbjct: 165 VDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVES----FARMVCDGSVRPDATTLASVLP 220
Query: 102 ASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV 161
A+ A D GR VH+F K G + +V + L+ +Y++ ++ A LF +E + V
Sbjct: 221 AA-AEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLV 279
Query: 162 SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
++NALI+G++ ++ F+E++ G P + ++ + G + +H V
Sbjct: 280 AYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFV 339
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
+KSG + V + ++ + +E A K F+ + ++ + SWN+M++G AQ+GL + V
Sbjct: 340 LKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAV 399
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLL 341
FE+M++ + PN +T L+AC+ G L G+ ++ + +EP +D+
Sbjct: 400 ALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMY 459
Query: 342 GRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ G + A + M W A++ +H
Sbjct: 460 AKCGSISEARRIFNTMD-NKNVVSWNAMIAGYGLH 493
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 6/267 (2%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V S+L +Y ++D A +F + S + V WN L+AG + G +A+ +F+ M+
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203
Query: 188 REG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+G P + +SV A A + G+ VH+ K G V L+ +Y+K G +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E A +F+ + K D+V++N++++G + +G+ ++V F +++ G+ PN T + ++
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
S G Q + K G L R ++ A K MP E T W
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMP-EKTMESW 382
Query: 367 GALLGACRMHKNVELGAYAAERIFELD 393
A++ + E+ E++ +L+
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLN 409
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/626 (38%), Positives = 340/626 (54%), Gaps = 70/626 (11%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
AR +HA + S D + +++L++Y + G AR +FD MP K++V W+ALI+GYS
Sbjct: 36 ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95
Query: 71 NDQPENAIILFSQMLRLGLKPNQFT---LSSVLKASG----------------------- 104
E A L QM G++PN T L S L SG
Sbjct: 96 RGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATG 155
Query: 105 -----AGATDDK---FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+ D K G+QVH + +K G + V ++L+DMY + + D+ +F
Sbjct: 156 VSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESS 215
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSE------------------------------- 185
+ S NAL+AG +R ++ +AL F E
Sbjct: 216 HMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVD 275
Query: 186 ----MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M G EP + V A A+ +L G+ H ++ G +VG+ LVDMYA
Sbjct: 276 LFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYA 335
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G A +F+ + R+VVSWN+M+ G A HG V+ F M + P+ VTF C
Sbjct: 336 KCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTC 395
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACS AGL +EG+ YF M++ HG+ P HY V LLGR+G LD A I EMP E
Sbjct: 396 VLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFE 455
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + +WG+LLG+CR++ NV L AAE++F+L+P ++G ++LL+NIYAS + R R
Sbjct: 456 PDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVR 515
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK G+KKE CSW+E KN VHM +A D++HP I +K +++ ++ ++G+ P
Sbjct: 516 DEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRD 575
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL ++QE++ L VHSEKLA+A LIST PG+ + + KN+R+CGDCH A KF S
Sbjct: 576 FVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFE 635
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI VRDTNRFHHF+DG CSCGDYW
Sbjct: 636 QREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 145/312 (46%), Gaps = 46/312 (14%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+K++ + VH +++ + + D + +++ Y KCG DE ++F E D+ + AL
Sbjct: 166 VKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNAL 225
Query: 65 ISGYSQNDQPENAIILFSQ-----------------------------------MLRLGL 89
++G S+N Q A++LF + M +G+
Sbjct: 226 VAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGV 285
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+PN T+ VL A A GR H F L+ G+ +VYVGS+L+DMYA+ + A
Sbjct: 286 EPNSVTIPCVLPAF-ANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHAR 344
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F A+ S+N VSWNA+I G+A + A++ F M + +P +++ V A + G
Sbjct: 345 TIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAG 404
Query: 210 SLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVS 263
E+G+ H I + A +V + +SG +++A + N + + D
Sbjct: 405 LTEEGRRYFNEMQQGHGISPRMEHYA----CMVTLLGRSGKLDEAYDLINEMPFEPDSCI 460
Query: 264 WNSMLTGCAQHG 275
W S+L C +G
Sbjct: 461 WGSLLGSCRVYG 472
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 139/369 (37%), Gaps = 75/369 (20%)
Query: 80 LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMY 139
L+ + + P+ L S LK+ A R +HA + G + +V SSLL Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCPA----QPLARALHAAAVVSGLAEDPFVASSLLHSY 62
Query: 140 AR----------FDQMDD---------------------AWFLFTALES----KNEVSWN 164
R FD+M + AW L + S N ++WN
Sbjct: 63 IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
L++G R A+ M EGF P S +A+ + GK VH +V+K+
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFN------------------------------ 254
G +L A V L+DMY K G ++ +VF+
Sbjct: 183 GCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242
Query: 255 -----RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
R ++ +VVSW S++ C Q+G V F M G+ PN VT CVL A ++
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANV 302
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+ + G + VD+ + G A MP + W A+
Sbjct: 303 AALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVS-WNAM 361
Query: 370 LGACRMHKN 378
+G MH +
Sbjct: 362 IGGYAMHGD 370
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
++ L R H L F +D+ + + +++ YAKCG AR +FD MP +++V+W A
Sbjct: 301 NVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNA 360
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I GY+ + NA+ LF M + KP+ T + VL A ++ R + +
Sbjct: 361 MIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGH 420
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIA 168
G + + ++ + R ++D+A+ L + + W +L+
Sbjct: 421 GISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLG 466
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/591 (37%), Positives = 336/591 (56%), Gaps = 33/591 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ R +H H+L + ++ + ++ Y CG LD AR +FD P D++TW +IS
Sbjct: 134 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 193
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++ + E + LF M + P TL VL A + D + G++VH++ +
Sbjct: 194 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC-SKLKDLRTGKKVHSYVKNCKVES 252
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALES------------------------------ 157
N+ + ++++DMYA +MD A +F ++ +
Sbjct: 253 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 312
Query: 158 -KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
K+ VSW A+I G+ R + ++AL F M +P F+ SV TA A G+LE G+W
Sbjct: 313 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 372
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ ++ ++ + FV N L+DMY K G ++ AE +F + +RD +W +M+ G A +G
Sbjct: 373 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 432
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYV 335
G+ + F ML+ I P+++T++ VL+AC+H GL+D+G+ YF M +HG+EP AHY
Sbjct: 433 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 492
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VDLL RAG L A + I MPI+ + VWGALL CR+++ ++ ++I EL+P
Sbjct: 493 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 552
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ ++LL NIYA+ R ND R+MM + G+KK P CS +E VH FVA D +HPQ
Sbjct: 553 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQ 612
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I K ++++ +K GY PD S V ++++E + HSEKLA+AF LI++PPG
Sbjct: 613 TKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGV 672
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI I KN+R+C DCH+ K SKV RE+IVRD RFHHF+ G CSC DYW
Sbjct: 673 TIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 195/405 (48%), Gaps = 44/405 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDMV 59
C + +L++ VH + + +QN ++ + G AR+LFDE+P ++
Sbjct: 28 CESMDQLQQ---VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLF 84
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD---KFGRQV 116
W +I GYS+ D P+ + L+ +MLR G+KP+++T + K G T D ++GRQ+
Sbjct: 85 IWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK----GFTRDIALEYGRQL 140
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H LK+G +NV+V ++L+ MY Q+D A +F + ++WN +I+ + + +
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 200
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E++ R F M + PT + V +A + L GK VH++V + + N +
Sbjct: 201 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAM 260
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM--------- 287
+DMYA G ++ A +F + RD++SW ++++G G +F+KM
Sbjct: 261 IDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWT 320
Query: 288 ------------------LRN----GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
RN + P++ T + VLTAC+H G L+ G+ + ++
Sbjct: 321 AMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRN 380
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ + +D+ + G +D+A REM + W A++
Sbjct: 381 KIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 424
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ + +I + KND+ ++N +++ Y KCG +D+A +F EM +D TW
Sbjct: 361 CAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTW 420
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + N E A+ +FS ML+ + P++ T VL A DK +
Sbjct: 421 TAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTS 480
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
++G + N+ L+D+ AR ++ +A+ + + K N + W AL+AG E + A
Sbjct: 481 QHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 540
Query: 181 RTFSEMLREGFEP 193
++L EP
Sbjct: 541 MVVKQILE--LEP 551
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/556 (39%), Positives = 337/556 (60%), Gaps = 5/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ S +D + + +++ Y K G ++A++LFDEMP KD+V+W +L+SG S
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200
Query: 74 PENAIILFSQM-LRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ F +M G +PN+ TL SV+ A + GA D+ G+ +H +K G V
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE--GKSLHGVVVKLGMSGKAKV 258
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+SL++MY + +D A LF + ++ VSWN+++ H EK + F+ M R G
Sbjct: 259 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 318
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + ++ A TG Q + +HA++ + G + L+++YAK G + +E
Sbjct: 319 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 378
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F + RD ++W +ML G A H G+ ++ F+ M++ G+ + VTF +L+ACSH+GL
Sbjct: 379 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 438
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++EG+ YF +M + + VEP HY VDLLGR+G L+ A + I+ MP+EP++ VWGALL
Sbjct: 439 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 498
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GACR++ NVELG AE++ LDP D +I+L+NIY++AG DA++ R +MKE + +
Sbjct: 499 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 558
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CS++E N +H FV D HP+ IH K E+ KI++ G P + VL D++
Sbjct: 559 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 618
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ + HSEKLA+AF L+ T G + I KN+R+CGDCHS KFAS + +R II+RD+
Sbjct: 619 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 678
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF DG CSC DYW
Sbjct: 679 RFHHFADGLCSCRDYW 694
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 186/334 (55%), Gaps = 22/334 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E + +H ++ + N+++N Y K G LD A +LF+EMPV+ +V+W
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ---VHA 118
+++ ++ N E + LF+ M R G+ P+Q T+ ++L+A TD GRQ +HA
Sbjct: 291 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA----CTDTGLGRQAESIHA 346
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ + G++ ++ + ++LL++YA+ +++ + +F ++ ++ ++W A++AG+A + G +
Sbjct: 347 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGRE 406
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK---WVHAHVIKSGGQLVAFVGNT 235
A++ F M++EG E H +++ + +A + +G +E+GK + + V + +L + +
Sbjct: 407 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SC 464
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNG 291
+VD+ +SG +EDA ++ + ++ W ++L C +G LGK E++L
Sbjct: 465 MVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVA---EQLL--S 519
Query: 292 IAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+ P + ++ + S AGL + ALMK+
Sbjct: 520 LDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKE 553
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A++S S+ +HA VIKS F+G+ LV MY K G EDA+++F+ + +
Sbjct: 124 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 183
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
D+VSWNS+++G + G A + F +M +G PN+VT L V++AC+ G LDEG+
Sbjct: 184 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 243
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ K G+ + + +++ G+ G LD A + EMP+ + W +++
Sbjct: 244 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMV 294
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/591 (37%), Positives = 336/591 (56%), Gaps = 33/591 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ R +H H+L + ++ + ++ Y CG LD AR +FD P D++TW +IS
Sbjct: 155 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 214
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++ + E + LF M + P TL VL A + D + G++VH++ +
Sbjct: 215 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC-SKLKDLRTGKKVHSYVKNCKVES 273
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALES------------------------------ 157
N+ + ++++DMYA +MD A +F ++ +
Sbjct: 274 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 333
Query: 158 -KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
K+ VSW A+I G+ R + ++AL F M +P F+ SV TA A G+LE G+W
Sbjct: 334 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 393
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ ++ ++ + FV N L+DMY K G ++ AE +F + +RD +W +M+ G A +G
Sbjct: 394 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 453
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYV 335
G+ + F ML+ I P+++T++ VL+AC+H GL+D+G+ YF M +HG+EP AHY
Sbjct: 454 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 513
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VDLL RAG L A + I MPI+ + VWGALL CR+++ ++ ++I EL+P
Sbjct: 514 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 573
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ ++LL NIYA+ R ND R+MM + G+KK P CS +E VH FVA D +HPQ
Sbjct: 574 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQ 633
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I K ++++ +K GY PD S V ++++E + HSEKLA+AF LI++PPG
Sbjct: 634 TKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGV 693
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI I KN+R+C DCH+ K SKV RE+IVRD RFHHF+ G CSC DYW
Sbjct: 694 TIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 195/405 (48%), Gaps = 44/405 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDMV 59
C + +L++ VH + + +QN ++ + G AR+LFDE+P ++
Sbjct: 49 CESMDQLQQ---VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLF 105
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD---KFGRQV 116
W +I GYS+ D P+ + L+ +MLR G+KP+++T + K G T D ++GRQ+
Sbjct: 106 IWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK----GFTRDIALEYGRQL 161
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H LK+G +NV+V ++L+ MY Q+D A +F + ++WN +I+ + + +
Sbjct: 162 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKF 221
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E++ R F M + PT + V +A + L GK VH++V + + N +
Sbjct: 222 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAM 281
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM--------- 287
+DMYA G ++ A +F + RD++SW ++++G G +F+KM
Sbjct: 282 IDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWT 341
Query: 288 ------------------LRN----GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
RN + P++ T + VLTAC+H G L+ G+ + ++
Sbjct: 342 AMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRN 401
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ + +D+ + G +D+A REM + W A++
Sbjct: 402 KIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 445
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ + +I + KND+ ++N +++ Y KCG +D+A +F EM +D TW
Sbjct: 382 CAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTW 441
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + N E A+ +FS ML+ + P++ T VL A DK +
Sbjct: 442 TAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTS 501
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
++G + N+ L+D+ AR ++ +A+ + + K N + W AL+AG E + A
Sbjct: 502 QHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 561
Query: 181 RTFSEMLREGFEP 193
++L EP
Sbjct: 562 MVVKQILE--LEP 572
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/627 (37%), Positives = 363/627 (57%), Gaps = 71/627 (11%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC----LDEARKLFDEMPVKDMVTWTAL 64
K+ HA L S ++ N +++ Y+KC L ARK+FDE+ KD +WT +
Sbjct: 166 KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTM 225
Query: 65 ISGYSQN---DQPE---------------NAII--------------LFSQMLRLGLKPN 92
++GY +N D E NA+I + +M+ G++ +
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+FT SV++A A A + G+QVHA+ L+ D++ + +SL+ +Y + + D+A +F
Sbjct: 286 EFTYPSVIRAC-ATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 153 TALESKNEVSWNALIAGH-------------------------------ARKSEGEKALR 181
+ +K+ VSWNAL++G+ A GE+ L+
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS M REGFEP +++S + A G+ G+ HA ++K G GN L+ MYA
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYA 463
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E+A +VF + D VSWN+++ QHG G V +E+ML+ GI P+++T L
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTACSHAGL+D+G+ YF M+ + + P HY +DLL R+G A I +P +
Sbjct: 524 VLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFK 583
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA +W ALL CR+H N+ELG AA+++F L P G ++LL+N++A+ G+ + AR R
Sbjct: 584 PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVR 643
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M++ GVKKE ACSW+E + VH F+ +D +HP+ ++ +++ ++++++GYVPD+S
Sbjct: 644 KLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Query: 481 HVLSYADQQ-EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL + +E L HSEK+A+AF L+ PPG+TI I KN+R CGDCH+ F+F S V
Sbjct: 704 FVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWV 763
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+R+II+RD RFHHFR+G CSCG++W
Sbjct: 764 VQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 208/477 (43%), Gaps = 104/477 (21%)
Query: 2 CTHLKK--LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM------ 53
C L++ L+ AR VH +I+ F+ + N +++ Y K L+ AR+LFDE+
Sbjct: 22 CLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKI 81
Query: 54 -------------------------PV--KDMVTWTALISGYSQNDQPENAIILFSQMLR 86
PV +D V + A+I+G+S N+ +AI LF +M
Sbjct: 82 ARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH 141
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----- 141
G KP+ FT +SVL A D+K Q HA LK G + V ++L+ +Y++
Sbjct: 142 EGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 142 ---------FDQM----DDAWFLFTALESKNE------------------VSWNALIAGH 170
FD++ + +W KN V++NA+I+G+
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ ++AL M+ G E F+Y SV A A+ G L+ GK VHA+V++
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS------------------------ 266
F N+LV +Y K G ++A +F ++ +D+VSWN+
Sbjct: 322 F-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 267 -------MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
M++G A++G G+ ++ F M R G P F + +C+ G GQ Y
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
A + K G + + + + + G+++ A + R MP + + W AL+ A H
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQH 496
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 353/603 (58%), Gaps = 39/603 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A+ +H +L F +D+ + N +++ Y + LD+ARK+F+EMP++D+V+W
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL------KPNQFTLSSVLKASGAGATDDKFGRQ 115
+LISGY+ N A+ ++ Q ++L + KP+ T++S+L+A G D +FG+
Sbjct: 185 NSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGH-LGDLEFGKY 243
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFD-------------------------------Q 144
VH + + GY+ + + L++MYA+ +
Sbjct: 244 VHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGK 303
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
M D+ +F +++++ ++WN +IA + LR S M EG P + S+
Sbjct: 304 MGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPV 363
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ + QGK +H + K G + VGN L++MY+K GS+ ++ +VF + +DVV+W
Sbjct: 364 CSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW 423
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
++++ C +G GK VR F +M GI P+ V F+ ++ ACSH+GL++EG YF MKK
Sbjct: 424 TALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKK 483
Query: 325 -HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ +EP HY VDLL R+ LLD+A FI MP++P +++WGALL ACRM + E+
Sbjct: 484 DYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAE 543
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+ERI EL+P D+G ++L++NIYA+ G+ + RK +K G+KK+P CSW+E +N V
Sbjct: 544 RVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKV 603
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
++F Q ++K ++ + + GY+ + VL D+ E+ L HSE+LA
Sbjct: 604 YVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLA 663
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF L++T PG+ + + KN+RVC DCH+ K+ SK+V+RE++VRD NRFH F+DG CSCG
Sbjct: 664 IAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCG 723
Query: 564 DYW 566
DYW
Sbjct: 724 DYW 726
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 171/361 (47%), Gaps = 41/361 (11%)
Query: 54 PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 113
P ++ W ++I + N A+ L+S+ R+ L+P+ +T SV+ A AG D +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC-AGLLDFEMA 134
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+ +H L G+ ++Y+G++L+DMY RF+ +D A +F + ++ VSWN+LI+G+
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 174 SEGEKAL-------RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
+AL + F EM+ + F+P + +S+ A G LE GK+VH ++I SG
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 253
Query: 227 QLVAFVGNTLVDMYAKSGSI-------------------------------EDAEKVFNR 255
+ N L++MYAK G++ D+ KVF
Sbjct: 254 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ RD+++WN+++ C +R +M G+ P+ T L +L CS +G
Sbjct: 314 MKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 373
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+ + K G+E + +++ + G L + + + M + W AL+ AC M
Sbjct: 374 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT-WTALISACGM 432
Query: 376 H 376
+
Sbjct: 433 Y 433
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
Q SS+ +A + AT + ++H+ + G +V + L+ YA F ++ +F
Sbjct: 13 QTLFSSISRALASAATTTQL-HKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 71
Query: 153 -TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
A S N WN++I +AL +SE R +P +++ SV A A
Sbjct: 72 RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDF 131
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E K +H V+ G ++GN L+DMY + ++ A KVF + RDVVSWNS+++G
Sbjct: 132 EMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGY 191
Query: 272 AQHG-------LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+G + +++ F +M+ N P+ +T +L AC H G L+ G+ M
Sbjct: 192 NANGYWNEALEIYYQSIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 250
Query: 325 HGVEPEEAHYVTFVDLLGRAGLL 347
G E + +++ + G L
Sbjct: 251 SGYECDTTASNILINMYAKCGNL 273
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 14/197 (7%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
K LR E R+ +SS+ ALAS + Q +H+ +I G L+
Sbjct: 2 KTLRVLHECSRQTL------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI 55
Query: 238 DMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
YA + VF RL +V WNS++ +GL + + + R + P+
Sbjct: 56 AKYAHFRDPTSSFSVF-RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPD 114
Query: 296 QVTFLCVLTACSHAGLLD--EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
TF V+ AC AGLLD + + G + +D+ R LD+A K
Sbjct: 115 TYTFPSVINAC--AGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKV 172
Query: 354 IREMPIEPTAAVWGALL 370
EMP+ + W +L+
Sbjct: 173 FEEMPLRDVVS-WNSLI 188
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/629 (36%), Positives = 363/629 (57%), Gaps = 69/629 (10%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVTWTA 63
+K +A+ +HA IL ++ + ++ +TIL+ Y+ L ++ +F+ +P + W +
Sbjct: 18 VKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKS 76
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I Y+ + +++ F QML G P+ SVLK S D +FG VH ++
Sbjct: 77 IIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLK-SCTLMKDLRFGESVHGCIIRL 135
Query: 124 GYDWNVYVGSSLLDMYARFDQMDD-----------------------AWFL------FTA 154
G +++Y ++L++MY++F +++ +++L F
Sbjct: 136 GMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEM 195
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ ++ VSWN +I+G+A+ E AL EM P F+ SSV A +L +G
Sbjct: 196 MPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG 255
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
K +H + I++G F+G++L+DMYAK ++D+ +VF L + D +SWNS++ GC Q+
Sbjct: 256 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315
Query: 275 GLGKATVRWFEKML------------------------------------RNGIAPNQVT 298
G+ +++F++ML G+ PN V
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYVA 375
Query: 299 FLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ VLTACSHAGL+DE YF ++ + + + P HY DLLGR G L+ A +FI +M
Sbjct: 376 FMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM 435
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
IEPT +VW LL ACR+HKN+EL ++++F +DP + G ++LL+NIY++AGR DA
Sbjct: 436 HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDAR 495
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
+ R M++ G+KK+PACSW+E KN VH FVA D +HP I++ + + E++++ GYV
Sbjct: 496 KLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVL 555
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D++ VL +++++ L HSE+LA+ F +ISTP G+TI + KN+RVC DCH+A KF S
Sbjct: 556 DTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFIS 615
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+V REI+VRD +RFHHF+DG CSCGD+W
Sbjct: 616 KIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/564 (37%), Positives = 341/564 (60%), Gaps = 3/564 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ L R +H + + F ++ NT+L+ Y+KCG L+ A ++F +M +V+W
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 365
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+ Y + +AI LF +M G++P+ +T++S++ A ++ DK GR VH++ +
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK-GRDVHSYVI 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G N+ V ++L++MYA+ +++A +F+ + K+ VSWN +I G+++ +AL
Sbjct: 425 KNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALE 484
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M ++ F+P + + V A A +L++G+ +H H+++ G V LVDMYA
Sbjct: 485 LFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYA 543
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A+ +F+ + K+D++SW M+ G HG G + F +M GI P++ +F
Sbjct: 544 KCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSA 603
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GLL+EG +F M+ GVEP+ HY VDLL R G L +A KFI MPI+
Sbjct: 604 ILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIK 663
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +WG LL CR+H +V+L AE IFEL+P ++ +++LAN+YA A + + + R
Sbjct: 664 PDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLR 723
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K M++ G K+ P CSW+E ++FVA + HPQ I +++ +++ Y
Sbjct: 724 KRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFR 783
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+VL D E+E HSEK A+AF +++ PPG T+ + KN RVCGDCH KF SK
Sbjct: 784 YVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTT 843
Query: 541 EREIIVRDTNRFHHFRDGFCSCGD 564
+ EI++RD+NRFHHF+DG CSC D
Sbjct: 844 KMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 185/371 (49%), Gaps = 2/371 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L++ + VH+ I+ + D A+ ++ Y CG L + RK+FD++ + W
Sbjct: 104 CAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+S Y++ ++ LF +M +LG+ N +T + VLK A K ++VH + L
Sbjct: 164 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAA-LGKVKECKRVHGYVL 222
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ N V +SL+ Y +F ++ A LF L + VSWN++I G L
Sbjct: 223 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 282
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML G E + SV A A+ G+L G+ +H +K+ NTL+DMY+
Sbjct: 283 IFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 342
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A +VF ++ +VSW S++ + GL + F++M G+ P+ T
Sbjct: 343 KCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 402
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
++ AC+ + LD+G+ + + K+G+ +++ + G ++ A ++P++
Sbjct: 403 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKD 462
Query: 362 TAAVWGALLGA 372
+ W ++G
Sbjct: 463 IVS-WNTMIGG 472
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 180 LRTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
LR E+L + +E SY SV A SLE GK VH+ +I +G + +G LV
Sbjct: 77 LRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLV 136
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY G + K+F++++ V WN +++ A+ G + +V F+KM + G+ N
Sbjct: 137 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 196
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
TF CVL + G + E + + K G A + + + G ++ A E+
Sbjct: 197 TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 256
Query: 358 PIEPTAAVWGALLGAC 373
EP W +++ C
Sbjct: 257 S-EPDVVSWNSMINGC 271
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/564 (38%), Positives = 353/564 (62%), Gaps = 3/564 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L K + VH +L + F ++ + N +L+ Y+K +DE KLF EMP D +++ +
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVV 313
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ Y+ N Q + + LF ++ QF +++L + + + + GRQ+H + G
Sbjct: 314 ITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA-TSSLNLRMGRQIHCQAITVG 372
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ V ++L+DMYA+ + +A +F + K+ V W A+I+ + +K + E+ + FS
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M R G +++S+ A A+ S+ G+ +H+ +I+SG + G+ L+D YAK G
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ DA K F + +R+ VSWN++++ AQ+G T+ F++M+++G P+ V+FL VL+
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH G ++E +F M + + V P+ HY + VD+L R G D A K + EMP EP+
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFEL-DPHDSGPHILLANIYASAGRLNDAARARKM 422
+W ++L +CR+HKN EL AA+R+F + D D+ P+I ++NIYA AG+ ++ A+ +K
Sbjct: 613 IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M++ GV+K PA SWVE K+ H+F AND +HP+ I +K +S+++++ GY PD++
Sbjct: 673 MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D+ + L+ HSE+ A+AFAL++TP GS I + KN+R C DCH+A K S++VER
Sbjct: 733 LHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVER 792
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EIIVRD++RFHHF+DG CSCGDYW
Sbjct: 793 EIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 201/367 (54%), Gaps = 2/367 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H H++ ++ ++ + N++++AY K CL A +LF M KD VT+ +L++GYS
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E AI LF ++ G+KP+ FT +++L A+ G D KFG+QVH F LK + WNV+VG+
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAA-VGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LLD Y++ DQ+D+ LF + + +S+N +I +A + +++ F ++ F+
Sbjct: 281 ALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR 340
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F ++++ + S+ +L G+ +H I G + V N LVDMYAK ++A+K+F
Sbjct: 341 RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIF 400
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + + V W +M++ Q G + + F M R G+ +Q TF +L AC++ +
Sbjct: 401 DNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L+ + G +D + G + A+K EMP E + W AL+ A
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAY 519
Query: 374 RMHKNVE 380
+ NV+
Sbjct: 520 AQNGNVD 526
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 188/367 (51%), Gaps = 5/367 (1%)
Query: 8 LKEARIVHAHILGSAF--KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
L+ +VHAH + KN I++ N +++ + K G L +AR+LFD M + V+WT LI
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISL-NMMISGHLKFGKLSKARELFDGMVERTAVSWTILI 112
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GY Q++Q + A L++ M R G++P+ TL ++L G T + Q+H +K GY
Sbjct: 113 GGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI-VQIHTHVIKLGY 171
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++N+ V +SL+D Y + + A LF + +K+ V++N+L+ G++ + E+A+ F E
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+ G +P+ F+++++ +A + G+ VH V+K+ FVGN L+D Y+K
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+++ K+F + + D +S+N ++T A +G K + F K+ Q F +L+
Sbjct: 292 VDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+ + L G+ G E VD+ + A K + + T
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP- 410
Query: 366 WGALLGA 372
W A++ A
Sbjct: 411 WTAMISA 417
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 134/308 (43%), Gaps = 43/308 (13%)
Query: 89 LKPNQFTL--SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
+KP + TL + VL+ S A + A +K G++ N + ++ + +
Sbjct: 1 MKPYRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLV 60
Query: 147 DAWFLFTALESKNEVSWNALIAGHAR-------------------------------KSE 175
A +F + +KN +S N +I+GH + ++
Sbjct: 61 HAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQ 120
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK---WVHAHVIKSGGQLVAFV 232
++A R +++M R G EP Y ++ T L+ G LE +H HVIK G + V
Sbjct: 121 SKEAFRLYADMRRGGIEP---DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMV 177
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N+LVD Y K+ + A ++F +L +D V++NS++TG + GL + + F ++ +GI
Sbjct: 178 CNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI 237
Query: 293 APNQVTFLCVLTACSHAGLLDE--GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
P+ TF +L+A GL D GQ + K +D + +D
Sbjct: 238 KPSDFTFAALLSAA--VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295
Query: 351 LKFIREMP 358
K EMP
Sbjct: 296 GKLFXEMP 303
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L + R +H+ ++ S F +++ + +L+ YAKCGC+ +A K F EMP ++ V+W
Sbjct: 453 CANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSW 512
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALIS Y+QN + + F QM++ G KP+ + SVL A ++ ++
Sbjct: 513 NALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
Y +S++D+ R + D+A L T + +E+ W++++
Sbjct: 573 IYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVL 619
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/592 (38%), Positives = 349/592 (58%), Gaps = 30/592 (5%)
Query: 2 CTHLKKLKEARIVHAHIL-GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDM 58
C+ L+ L R +HA++L S + + + +++ YA + AR++FD +P + +
Sbjct: 281 CSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQL 340
Query: 59 VTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKF-GRQ- 115
W A++ GY+Q E A+ LF++M G+ P++ T++ VL A A + F G++
Sbjct: 341 GLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPAC---ARSETFAGKEA 397
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
VH + LK G N +V ++L+D+YAR M+ A ++F A+E ++ VSWN LI G +
Sbjct: 398 VHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGH 457
Query: 176 GEKALRTFSEMLREG------------------FEPTHFSYSSVFTALASTGSLEQGKWV 217
A + EM ++G P + + ++ A + +GK +
Sbjct: 458 IHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEI 517
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
H + ++ VG+ LVDMYAK G + + VF+RL KR+V++WN ++ HGLG
Sbjct: 518 HGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLG 577
Query: 278 KATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYV 335
+ F++M + N PN+VTF+ L ACSH+G++D G F MK+ HGV+P +
Sbjct: 578 DEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHA 637
Query: 336 TFVDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
VD+LGRAG LD A I M P E + W + LGACR+H+NV LG AAER+F+L+P
Sbjct: 638 CAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEP 697
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHP 454
++ ++LL NIY++AG ++ R M++ GV KEP CSW+E +H F+A + AHP
Sbjct: 698 DEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHP 757
Query: 455 QRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPG 514
+ ++H + E+++ GY PD+S VL ++ E+ A L+ HSEKLA+AF L+ TPPG
Sbjct: 758 ESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPG 817
Query: 515 STIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+TI + KN+RVC DCH A KF S++V REI++RD RFHHF DG CSCGDYW
Sbjct: 818 ATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 190/393 (48%), Gaps = 24/393 (6%)
Query: 5 LKKLKEARIVHAHILGSAFKNDI------AMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
L+ L R +H G+A + D+ A+ N +L AYA+CG L A LF+ MP +D
Sbjct: 72 LRSLIAVRSIH----GAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDA 127
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
VT+ +LI+ + A+ ML G + FTL SVL A A D + GR+ HA
Sbjct: 128 VTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHA 187
Query: 119 FCLKYGY-DWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNE-----VSWNALIAGHA 171
F LK G+ D + + ++LL MYAR +DDA LF ++++ + V+WN +++
Sbjct: 188 FALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLV 247
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-A 230
+ +A+ +M+ G P +++S A + L G+ +HA+V+K +
Sbjct: 248 QSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANS 307
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLL--KRDVVSWNSMLTGCAQHGLGKATVRWFEKM- 287
FV + LVDMYA + A +VF+ + R + WN+M+ G AQ G+ + + F +M
Sbjct: 308 FVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARME 367
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
G+ P++ T VL AC+ + + + K G+ +DL R G +
Sbjct: 368 AEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDM 427
Query: 348 DRALKFIREMPIEPTAAV-WGALLGACRMHKNV 379
+ A IEP V W L+ C + ++
Sbjct: 428 EAARWIF--AAIEPRDVVSWNTLITGCVVQGHI 458
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/591 (38%), Positives = 353/591 (59%), Gaps = 41/591 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH +D+ + N +++AY KC C++ AR++FD++ V+D+V+WT+L S Y +
Sbjct: 186 VHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGF 245
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P + +F +M G+KPN T+SS+L A A D K G+++H F +++G N++V S
Sbjct: 246 PRKGMDVFREMGWSGVKPNPMTVSSILPAC-AELKDLKSGKEIHGFAVRHGMVVNLFVCS 304
Query: 134 SLLDMYAR----------FDQMD-----------DAWF----------LFTALESK---- 158
+L+ +YA+ FD M A+F LF +
Sbjct: 305 ALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRA 364
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
+E +WNA+I G E+A+ F +M + GF+P + SS+ A + + +L GK +H
Sbjct: 365 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 424
Query: 219 AHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+V + G L + L+ MYAK G + + VF+ + ++DVV+WN+M+ A HG
Sbjct: 425 CYVFRHWKVGDLTS--TTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN 482
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYV 335
GK + F+KML + + PN VTF VL+ CSH+ L++EG F M + H VEP+ HY
Sbjct: 483 GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 542
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VD+ RAG L+ A KFI+ MP+EPTA+ WGALL ACR++KNVEL +A+++FE++P+
Sbjct: 543 CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPN 602
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ G ++ L NI +A ++A++ R +MKE G+ K P CSW++ N VH FV D ++ +
Sbjct: 603 NPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIE 662
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I+ E+ EK+K GY PD+ +VL DQ+E+ L HSEKLA+AF +++ S
Sbjct: 663 SDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQS 722
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI + KN+R+CGDCH+A K+ SKVV I+VRD+ RFHHF++G CSC D W
Sbjct: 723 TIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 1/291 (0%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G + AR+LFD +P D T + LIS + + AI ++S + G+KP+ +
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
KA A + D ++VH + G +V+VG++L+ Y + ++ A +F L ++
Sbjct: 172 KAC-AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 230
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
VSW +L + + + K + F EM G +P + SS+ A A L+ GK +H
Sbjct: 231 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 290
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
++ G + FV + LV +YAK S+ +A VF+ + RDVVSWN +LT ++ +
Sbjct: 291 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 350
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
F KM R+G+ ++ T+ V+ C G +E F M+K G +P E
Sbjct: 351 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 53/370 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-- 59
C LK LK + +H + ++ + + +++ YAKC + EAR +FD MP +D+V
Sbjct: 275 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 334
Query: 60 ---------------------------------TWTALISGYSQNDQPENAIILFSQMLR 86
TW A+I G +N + E A+ +F +M +
Sbjct: 335 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 394
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
+G KPN+ T+SS+L A + + + + G+++H + ++ ++ ++LL MYA+ ++
Sbjct: 395 MGFKPNEITISSILPAC-SFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 453
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+ +F + K+ V+WN +I +A G++AL F +ML +P +++ V + +
Sbjct: 454 LSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS 513
Query: 207 STGSLEQGKWVHAHVIKSGGQ--LVAFVGN---TLVDMYAKSGSIEDAEKVFNRL-LKRD 260
+ +E+G + S G+ LV N +VD+Y+++G + +A K + ++
Sbjct: 514 HSRLVEEG----VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT 569
Query: 261 VVSWNSMLTGCAQHG---LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+W ++L C + L K + + ++ N N V+ +L A + E
Sbjct: 570 ASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPG-NYVSLFNILVT---AKMWSEASQ 625
Query: 318 YFALMKKHGV 327
LMK+ G+
Sbjct: 626 VRILMKERGI 635
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
++G L+ + + A LF + + + + LI+ +A++ +S +
Sbjct: 99 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 158
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G +P + + A A +G + K VH + G FVGN L+ Y K +E A
Sbjct: 159 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 218
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VF+ L+ RDVVSW S+ + + G + + F +M +G+ PN +T +L AC+
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+ +HG+ V L + + A MP + W +
Sbjct: 279 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS-WNGV 337
Query: 370 LGACRMHKNVELG 382
L A +K E G
Sbjct: 338 LTAYFKNKEYEKG 350
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/558 (40%), Positives = 338/558 (60%), Gaps = 6/558 (1%)
Query: 14 VHAHILGSAFKND---IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
VHA+ L + + + + +L+ YAKC L A ++F M V++ VTW+ALI G+
Sbjct: 223 VHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVL 282
Query: 71 NDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
D+ A LF ML G+ + +++S L+ A D + G Q+HA K G ++
Sbjct: 283 CDRMTEAFNLFKDMLVEGMCFLSATSVASALRVC-ASLADLRMGTQLHALLAKSGIHADL 341
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
G+SLL MYA+ +++A LF + K+ +S+ AL++G+ + + E+A F +M
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
+P + S+ A + +L+ G+ H VI G L + N+L+DMYAK G I+ +
Sbjct: 402 NVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLS 461
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VF+++ RD+VSWN+M+ G HGLGK F M G P+ VTF+C++ ACSH+
Sbjct: 462 RQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+ EG+ +F M K+G+ P HY+ VDLL R G LD A +FI+ MP++ VWGA
Sbjct: 522 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGA 581
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGACR+HKN++LG + I +L P +G +LL+NI+++AGR ++AA R + K G
Sbjct: 582 LLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 641
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK P CSW+E ++H FV D +HP I+ + I IK++GY D+S VL ++
Sbjct: 642 KKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEE 701
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+E+E L HSEKLA+AF ++S TI + KN+RVCGDCH+A K+ + V R IIVRD
Sbjct: 702 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 761
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFHHF++G CSCGD+W
Sbjct: 762 ANRFHHFKNGQCSCGDFW 779
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 194/383 (50%), Gaps = 13/383 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L R +HAH D+ + +++ Y +C A +F +MP++D+V W
Sbjct: 109 CSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAW 168
Query: 62 TALISGYSQNDQPENAII-LFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAF 119
A+++GY+ + +AI L R GL+PN TL S+L + GA G VHA+
Sbjct: 169 NAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ--GTSVHAY 226
Query: 120 CLKYGYDWN---VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
CL+ D N V +G++LLDMYA+ + A +F + +NEV+W+ALI G
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTAL---ASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+A F +ML EG S +SV +AL AS L G +HA + KSG G
Sbjct: 287 TEAFNLFKDMLVEGM--CFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L+ MYAK+G I +A +F+ + +D +S+ ++L+G Q+G + F+KM +
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ T + ++ ACSH L G+ + G+ E + + +D+ + G +D + +
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQV 464
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
+MP + W ++ +H
Sbjct: 465 FDKMPARDIVS-WNTMIAGYGIH 486
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ +HA + S D+ N++L+ YAK G ++EA LFDE+ +KD +++
Sbjct: 316 CASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISY 375
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL+SGY QN + E A ++F +M ++P+ T+ S++ A A + GR H +
Sbjct: 376 GALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA-LQHGRCSHGSVI 434
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + +SL+DMYA+ ++D + +F + +++ VSWN +IAG+ G++A
Sbjct: 435 IRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATT 494
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSG--GQLVAFVGNTLVD 238
F M +GFEP ++ + A + +G + +GK W K G ++ ++ +VD
Sbjct: 495 LFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVD 552
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP 294
+ A+ G +++A + + LK DV W ++L C H LGK R +K+ G
Sbjct: 553 LLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG- 611
Query: 295 NQVTFLCVLTACSHAGLLDE 314
F+ + S AG DE
Sbjct: 612 ---NFVLLSNIFSAAGRFDE 628
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 164/335 (48%), Gaps = 7/335 (2%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G L AR++FD +P D + ALI YS AI L+ ML + PN++T VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
KA A A D GR +HA G +++V ++L+D+Y R + A +F + ++
Sbjct: 107 KACSALA-DLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 161 VSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V+WNA++AG+A A+ +M R G P + S+ LA G+L QG VHA
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 220 HVIKS---GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ +++ + +G L+DMYAK + A +VF+ + R+ V+W++++ G
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLC-VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
F+ ML G+ T + L C+ L G AL+ K G+ +
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + + +AGL++ A E+ I+ T + +GALL
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALL 379
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
Q+ A +F + + + ++NALI ++ + A+ + ML P +++ V
Sbjct: 48 QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLK 107
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A ++ L G+ +HAH G FV L+D+Y + A VF ++ RDVV+
Sbjct: 108 ACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVA 167
Query: 264 WNSMLTGCAQHGL-GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
WN+ML G A HG+ A + R G+ PN T + +L + G L +G A
Sbjct: 168 WNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYC 227
Query: 323 KKHGVEPEEAHYV---TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ ++ E + +D+ + L A + M + W AL+G
Sbjct: 228 LRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWSALIG 278
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/607 (36%), Positives = 360/607 (59%), Gaps = 47/607 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ VH+HI+ F++D+ ++N +++ Y+ G L+ AR LFDE V+D+V++
Sbjct: 121 CARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSY 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY++ +QPE+A+ LF +M G+ P++FT ++ + G+Q+HA
Sbjct: 181 NTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSV-LNEPNVGKQIHAQVY 239
Query: 122 K--YGYDWNVYVGSSLLDMYA--------------------------------RFDQMDD 147
K D N+ + S+++DMYA R +++
Sbjct: 240 KNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINV 299
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + ++ +SW A+I+G+++ + +AL F EM G +P + +V +A A
Sbjct: 300 ARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACAR 359
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLV-----DMYAKSGSIEDAEKVFNRLLK--RD 260
G+ + GK ++ I++G F NT++ DMYAK GSI+ A ++F R+ K +
Sbjct: 360 LGAFDLGKRLYHQYIENG----VFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKT 415
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF- 319
+NSM+ G AQHGLG+ + F +++ G+ P++VTF+ VL AC H+GL++EG+ F
Sbjct: 416 GFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFE 475
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
++ +G++P+ HY VDLLGR G L+ A +++MP E + +W ALL ACR H NV
Sbjct: 476 SMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNV 535
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
++G A +++ E++ ++LL+NI A A + +A + RK+M++ G++K P S++E
Sbjct: 536 KIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIEL 595
Query: 440 KNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
A+H FVA+D +HPQ I ++++ ++K GYVP+++ V+ D++E+E+ + HS
Sbjct: 596 GGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHS 655
Query: 500 EKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
EKLALAF L+ P TI I KN+R+C DCH AFK S++ REI VRDT RFHHFR+G
Sbjct: 656 EKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGS 715
Query: 560 CSCGDYW 566
CSC D+W
Sbjct: 716 CSCMDFW 722
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 197/391 (50%), Gaps = 40/391 (10%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC---LDEARKLFDEMPVKDMVTWT 62
K K+ +HA + + + I + +++ ++ G LD +R LF ++ ++ W
Sbjct: 20 KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWN 79
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GYS++D P AI+L+ M+ G+ PN FT +L S A + + G +VH+ +
Sbjct: 80 TMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLN-SCARLSSLEPGHEVHSHII 138
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+G++ +++V ++L+ +Y+ F ++ A LF ++ VS+N +I G+A ++ E AL
Sbjct: 139 KHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALC 198
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--FVGNTLVDM 239
F EM G P F++ ++F+ + GK +HA V K+ + + + + +VDM
Sbjct: 199 LFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDM 258
Query: 240 YAKSGSIEDAEKV--------------------------------FNRLLKRDVVSWNSM 267
YAK G I AE+V FN + +RDV+SW +M
Sbjct: 259 YAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAM 318
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
++G +Q G + F++M GI P++VT + VL+AC+ G D G+ + ++GV
Sbjct: 319 ISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGV 378
Query: 328 EPEEAHYVTFV-DLLGRAGLLDRALKFIREM 357
+ V D+ + G +D AL+ R +
Sbjct: 379 FNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 164/328 (50%), Gaps = 11/328 (3%)
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF---DQMDDAWFLFTALESKNEVSWNALI 167
K G Q+HA + G ++ S L+ ++ D +D + LF+ ++ N WN +I
Sbjct: 23 KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMI 82
Query: 168 AGHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
G++R +A+ + M+ +G P +F++ + + A SLE G VH+H+IK G
Sbjct: 83 RGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGF 142
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+ FV N L+ +Y+ G++ A +F+ L RD+VS+N+M+ G A+ ++ + F +
Sbjct: 143 ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGE 202
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GVEPEEAHYVTFVDLLGRA 344
M +GI P++ TF+ + + CS + G+ A + K+ ++ VD+ +
Sbjct: 203 MQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKC 262
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE-LDPHDSGPHILL 403
GL++ A + M +AA W +++ C + E+ A ++F + D +
Sbjct: 263 GLINIAERVFSTMGTSKSAAAWSSMV--CGYARCGEIN--VARKLFNHMHERDVISWTAM 318
Query: 404 ANIYASAGRLNDAARARKMMKESGVKKE 431
+ Y+ AG+ ++A K M+ G+K +
Sbjct: 319 ISGYSQAGQCSEALELFKEMEALGIKPD 346
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS---IEDAEKVFNRL 256
S L S S +QG +HA I +G F + L+ ++ GS ++ + +F+++
Sbjct: 11 SSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA-PNQVTFLCVLTACSHAGLLDEG 315
++ WN+M+ G ++ + + + M+ GIA PN TF +L +C+ L+ G
Sbjct: 71 DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130
Query: 316 QGYFALMKKHGVEPE 330
+ + KHG E +
Sbjct: 131 HEVHSHIIKHGFESD 145
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/570 (39%), Positives = 325/570 (57%), Gaps = 47/570 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + E VH ++ + D+ +QN +++ YA+CG +D K+F+ M +++V+W
Sbjct: 141 CTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI GY++ D+P+ A+ LF +ML
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEML------------------------------------ 224
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
N + ++L+DMY + +D A LF +N V +N +++ +AR+ +AL
Sbjct: 225 ------NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 278
Query: 182 TFSEMLREGFEPTHFSYSSVFTALAST-----GSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
EML++G P + S +A A G + G WVH ++ K+G + L
Sbjct: 279 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTAL 338
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDM+A+ G + A +VFN++ +RDV +W + + A G G+ F +ML G+ P+
Sbjct: 339 VDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDV 398
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
V F+ VLTACSH G +++G F+LM+ HG+ P+ HY VDLLGRAGLL A I+
Sbjct: 399 VLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKS 458
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+EP VWG+LL ACR+HKNVE+ YAAERI EL P +G H+LL+NIYASAG+ D
Sbjct: 459 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDV 518
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
AR R ++E GV+K P S V+ +H F + D++HP+ I +E++ + G++
Sbjct: 519 ARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHI 578
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD S+VL D+QE+E L HSEKLA+AF LI+T I + KN+R+C DCHS K A
Sbjct: 579 PDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMA 638
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + REIIVRD NRFH FR G CSC DYW
Sbjct: 639 SIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
DDA F+ N+LI G++ G +A+ + ML G P H+++ V +
Sbjct: 93 DDALFML-----------NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+ +G VH V+K G + F+ N L+ YA+ G ++ KVF + +R+VVSW
Sbjct: 142 TKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWT 201
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
S++ G A+ K V F +ML N+V ++ G +D + F
Sbjct: 202 SLICGYARGDRPKEAVSLFFEML------NKVMVNALVDMYMKCGAIDAAKRLF----DE 251
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
V+ Y T + R GL AL + EM
Sbjct: 252 CVDRNLVLYNTILSNYARQGLAREALAILDEM 283
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 336/566 (59%), Gaps = 36/566 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L+ ++H +L ++ + N ++ Y KCGCL EAR++FDEM KD+V+W
Sbjct: 129 CSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSW 188
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++GY+ N + ++A+ + +M G KP+ T++S++ A ++++
Sbjct: 189 NSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV---------- 238
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+YV +F LE KN +SWN +I + + S +A+
Sbjct: 239 -------LYVEK-----------------IFVNLERKNLISWNVMIRVYMKNSLPTQAVD 274
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M + EP +++SV A +L G+ +H +V K + N+L+DMYA
Sbjct: 275 LYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYA 334
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G ++DA++VF+R+ RDV SW S+++ G G V F +ML +G AP+ + F+
Sbjct: 335 RCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVA 394
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSH+GLLDEG+ YF M + + P HY VDLLGRAG +D A I++MPIE
Sbjct: 395 ILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIE 454
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VW LL +CR+ N+++G AA+ + +L P SG ++LL+NIYA AGR + R
Sbjct: 455 PNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIR 514
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MK ++K P S VE N VH F+A D +HPQ I+++ + K+K++GYVP++
Sbjct: 515 SVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETD 574
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +++++E L VHSEKLA+ FAL++T I I KN+RVCGDCH A K SK+V
Sbjct: 575 SALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIV 633
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREIIVRDTNRFHHF+DG CSCGDYW
Sbjct: 634 EREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 35/365 (9%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+K + +H I + ++ ++ +YA CG RK+FDEM +++V + +I
Sbjct: 34 IKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRS 93
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y N + ++ +++F +M+ G +P+ +T VLKA + + ++G +H LK G D+
Sbjct: 94 YVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSC-SENLRYGLLIHGDVLKVGLDF 152
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
N++VG+ L+ MY + + +A +F + K+ VSWN+++AG+A + AL EM
Sbjct: 153 NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREME 212
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G +P + +S+ A+A+T S + V +V
Sbjct: 213 DYGQKPDGCTMASLMPAVANTSS----------------ENVLYV--------------- 241
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
EK+F L +++++SWN M+ ++ L V + +M + + P+ +TF VL AC
Sbjct: 242 --EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACG 299
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
L G+ ++K + P + +D+ R G LD A + M A+ W
Sbjct: 300 DLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVAS-WT 358
Query: 368 ALLGA 372
+L+ A
Sbjct: 359 SLISA 363
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 20/327 (6%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D K +++H N +G L+ YA + +F + +N V +N +I
Sbjct: 33 DIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIR 92
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ + L F EM+ GF P +++Y V A + + +L G +H V+K G
Sbjct: 93 SYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDF 152
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
FVGN L+ MY K G + +A +VF+ ++ +DVVSWNSM+ G A + + +M
Sbjct: 153 NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREME 212
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT---FVDLLGRAG 345
G P+ T ++ A ++ E Y ++K V E + ++ + + +
Sbjct: 213 DYGQKPDGCTMASLMPAVANTS--SENVLY---VEKIFVNLERKNLISWNVMIRVYMKNS 267
Query: 346 LLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAERIFE-LDPHDSGPHI 401
L +A+ +M +EP A + ++L AC + LG RI E ++ P++
Sbjct: 268 LPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLG----RRIHEYVEKKKLCPNL 323
Query: 402 LLAN----IYASAGRLNDAARARKMMK 424
LL N +YA G L+DA R MK
Sbjct: 324 LLENSLIDMYARCGCLDDAKRVFDRMK 350
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 351/591 (59%), Gaps = 41/591 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH +D+ + N +++AY KC C++ AR++FD++ V+D+V+WT+L S Y +
Sbjct: 100 VHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGF 159
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P + +F +M G+KPN T+SS+L A A D K G+++H F +++G N++V S
Sbjct: 160 PRKGMDVFREMGWSGVKPNPMTVSSILPAC-AELKDLKSGKEIHGFAVRHGMVVNLFVCS 218
Query: 134 SLLDMYARFDQMDDAWFLFTALESKN---------------------------------- 159
+L+ +YA+ + +A +F + ++
Sbjct: 219 ALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRA 278
Query: 160 -EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
E +WNA+I G E+A+ F +M + GF+P + SS+ A + + +L GK +H
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338
Query: 219 AHVIK--SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+V + G L + L+ MYAK G + + VF+ + ++DVV+WN+M+ A HG
Sbjct: 339 CYVFRHWKVGDLTS--TTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN 396
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYV 335
GK + F+KML + + PN VTF VL+ CSH+ L++EG F M + H VEP+ HY
Sbjct: 397 GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 456
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VD+ RAG L+ A KFI+ MP+EPTA+ WGALL ACR++KNVEL +A+++FE++P+
Sbjct: 457 CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPN 516
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ G ++ L NI +A ++A++ R +MKE G+ K P CSW++ N VH FV D ++ +
Sbjct: 517 NPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIE 576
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I+ E+ EK+K GY PD+ +VL DQ+E+ L HSEKLA+AF +++ S
Sbjct: 577 SDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQS 636
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI + KN+R+CGDCH+A K+ SKVV I+VRD+ RFHHF++G CSC D W
Sbjct: 637 TIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 1/291 (0%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G + AR+LFD +P D T + LIS + + AI ++S + G+KP+ +
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
KA A + D ++VH + G +V+VG++L+ Y + ++ A +F L ++
Sbjct: 86 KAC-AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 144
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
VSW +L + + + K + F EM G +P + SS+ A A L+ GK +H
Sbjct: 145 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 204
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
++ G + FV + LV +YAK S+ +A VF+ + RDVVSWN +LT ++ +
Sbjct: 205 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 264
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
F KM R+G+ ++ T+ V+ C G +E F M+K G +P E
Sbjct: 265 FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 53/370 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-- 59
C LK LK + +H + ++ + + +++ YAKC + EAR +FD MP +D+V
Sbjct: 189 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 248
Query: 60 ---------------------------------TWTALISGYSQNDQPENAIILFSQMLR 86
TW A+I G +N + E A+ +F +M +
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
+G KPN+ T+SS+L A + + + + G+++H + ++ ++ ++LL MYA+ ++
Sbjct: 309 MGFKPNEITISSILPAC-SFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 367
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+ +F + K+ V+WN +I +A G++AL F +ML +P +++ V + +
Sbjct: 368 LSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS 427
Query: 207 STGSLEQGKWVHAHVIKSGGQ--LVAFVGN---TLVDMYAKSGSIEDAEKVFNRL-LKRD 260
+ +E+G + S G+ LV N +VD+Y+++G + +A K + ++
Sbjct: 428 HSRLVEEG----VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPT 483
Query: 261 VVSWNSMLTGCAQHG---LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+W ++L C + L K + + ++ N N V+ +L A + E
Sbjct: 484 ASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPG-NYVSLFNILVT---AKMWSEASQ 539
Query: 318 YFALMKKHGV 327
LMK+ G+
Sbjct: 540 VRILMKERGI 549
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
++G L+ + + A LF + + + + LI+ +A++ +S +
Sbjct: 13 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G +P + + A A +G + K VH + G FVGN L+ Y K +E A
Sbjct: 73 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VF+ L+ RDVVSW S+ + + G + + F +M +G+ PN +T +L AC+
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+ +HG+ V L + + A MP + W +
Sbjct: 193 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS-WNGV 251
Query: 370 LGACRMHKNVELG 382
L A +K E G
Sbjct: 252 LTAYFKNKEYEKG 264
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/530 (41%), Positives = 340/530 (64%), Gaps = 2/530 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E HA I+ + D N ++N Y+KCG ++ ARKLFDEMPV+ +V+W ++ ++
Sbjct: 65 EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
QN E A++LF QM + G+ ++FT+SSV+ A A + +Q+H F LK D NV
Sbjct: 125 QNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFEC-KQLHGFALKTALDSNV 183
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VG++LLD+YA+ + DA +F + +++V+W++++AG+ + E+AL F
Sbjct: 184 FVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G E F+ SS +A A+ +L +GK V A + K+G FV ++L+DMYAK G IE+A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEA 303
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF+ + +++VV WN+ML+G ++H + +FEKM + GI PN++T++ VLTACSH
Sbjct: 304 YIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHL 363
Query: 310 GLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+++G+ YF LM + H V P HY VD+LGRAGLL A I MP + TA++WG+
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGS 423
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL +CR+++N+E AA+ +FE++PH++G H+LL+NIYA+ R + ARAR ++KES
Sbjct: 424 LLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKA 483
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KKE SW+E K+ VH F+ + HP+ I+ K ++ ++K+IGY + H L ++
Sbjct: 484 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEE 543
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
++ L+ HSEKLAL F ++ P G+ I I KN+R+CGDCHS K AS+
Sbjct: 544 SRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASR 593
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/619 (37%), Positives = 350/619 (56%), Gaps = 54/619 (8%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC----LDEARKLFDEMPVK 56
+ + + +++ +HA + S D IL A LD A K+F++MP +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 57 DMVTWTALISGYSQNDQPEN--AIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFG 113
+ +W +I G+S++D+ + AI LF +M+ ++PN+FT SVLKA A + G
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC-AKTGKIQEG 147
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA------------------------- 148
+Q+H LKYG+ + +V S+L+ MY M DA
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207
Query: 149 ---W-----------------FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
W LF + ++ VSWN +I+G++ + A+ F EM +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
P + + SV A++ GSLE G+W+H + SG ++ +G+ L+DMY+K G IE
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A VF RL + +V++W++M+ G A HG + F KM + G+ P+ V ++ +LTACSH
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 309 AGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
GL++EG+ YF+ M G+EP HY VDLLGR+GLLD A +FI MPI+P +W
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
ALLGACRM NVE+G A + ++ PHDSG ++ L+N+YAS G ++ + R MKE
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD 487
++K+P CS ++ +H FV DD+HP+ I+ EIS+K++ GY P ++ VL +
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 567
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++++E L HSEK+A AF LIST PG I I KN+R+C DCHS+ K SKV +R+I VR
Sbjct: 568 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 627
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D RFHHF+DG CSC DYW
Sbjct: 628 DRKRFHHFQDGSCSCMDYW 646
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/564 (38%), Positives = 353/564 (62%), Gaps = 3/564 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L K + VH +L + F ++ + N +L+ Y+K +DE KLF EMP D +++ +
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVV 313
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ Y+ N Q + + LF ++ QF +++L + + + + GRQ+H + G
Sbjct: 314 ITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIA-TSSLNLRMGRQIHCQAITVG 372
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ V ++L+DMYA+ + +A +F + K+ V W A+I+ + +K + E+ + FS
Sbjct: 373 ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M R G +++S+ A A+ S+ G+ +H+ +I+SG + G+ L+D YAK G
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ DA K F + +R+ VSWN++++ AQ+G T+ F++M+++G P+ V+FL VL+
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 305 ACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH G ++E +F M + + V P+ HY + VD+L R G D A K + EMP EP+
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFEL-DPHDSGPHILLANIYASAGRLNDAARARKM 422
+W ++L +CR+HKN EL AA+R+F + D D+ P+I ++NIYA AG+ ++ A+ +K
Sbjct: 613 IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M++ GV+K PA SWVE K+ H+F AND +HP+ I +K +S+++++ GY PD++
Sbjct: 673 MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D+ + L+ HSE+ A+AFAL++TP GS I + KN+R C DCH+A K S++VER
Sbjct: 733 LHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVER 792
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EIIVRD++RFHHF+DG CSCGDYW
Sbjct: 793 EIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 201/367 (54%), Gaps = 2/367 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H H++ ++ ++ + N++++AY K CL A +LF M KD VT+ +L++GYS
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E AI LF ++ G+KP+ FT +++L A+ G D KFG+QVH F LK + WNV+VG+
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAA-VGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LLD Y++ DQ+D+ LF + + +S+N +I +A + +++ F ++ F+
Sbjct: 281 ALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR 340
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F ++++ + S+ +L G+ +H I G + V N LVDMYAK ++A+K+F
Sbjct: 341 RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIF 400
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + + V W +M++ Q G + + F M R G+ +Q TF +L AC++ +
Sbjct: 401 DNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L+ + G +D + G + A+K EMP E + W AL+ A
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAY 519
Query: 374 RMHKNVE 380
+ NV+
Sbjct: 520 AQNGNVD 526
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 188/367 (51%), Gaps = 5/367 (1%)
Query: 8 LKEARIVHAHILGSAF--KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
L+ +VHAH + KN I++ N +++ + K G L +AR+LFD M + V+WT LI
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISL-NMMISGHLKFGKLSKARELFDGMVERTAVSWTILI 112
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GY Q++Q + A L++ M R G++P+ TL ++L G T + Q+H +K GY
Sbjct: 113 GGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI-VQIHTHVIKLGY 171
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++N+ V +SL+D Y + + A LF + +K+ V++N+L+ G++ + E+A+ F E
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+ G +P+ F+++++ +A + G+ VH V+K+ FVGN L+D Y+K
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+++ K+F + + D +S+N ++T A +G K + F K+ Q F +L+
Sbjct: 292 VDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI 351
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+ + L G+ G E VD+ + A K + + T
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVP- 410
Query: 366 WGALLGA 372
W A++ A
Sbjct: 411 WTAMISA 417
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 134/308 (43%), Gaps = 43/308 (13%)
Query: 89 LKPNQFTL--SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
+KP + TL + VL+ S A + A +K G++ N + ++ + +
Sbjct: 1 MKPYRATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLV 60
Query: 147 DAWFLFTALESKNEVSWNALIAGHAR-------------------------------KSE 175
A +F + +KN +S N +I+GH + ++
Sbjct: 61 HAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQ 120
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK---WVHAHVIKSGGQLVAFV 232
++A R +++M R G EP Y ++ T L+ G LE +H HVIK G + V
Sbjct: 121 SKEAFRLYADMRRGGIEP---DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMV 177
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N+LVD Y K+ + A ++F +L +D V++NS++TG + GL + + F ++ +GI
Sbjct: 178 CNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI 237
Query: 293 APNQVTFLCVLTACSHAGLLDE--GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
P+ TF +L+A GL D GQ + K +D + +D
Sbjct: 238 KPSDFTFAALLSAA--VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295
Query: 351 LKFIREMP 358
K EMP
Sbjct: 296 GKLFYEMP 303
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L + R +H+ ++ S F +++ + +L+ YAKCGC+ +A K F EMP ++ V+W
Sbjct: 453 CANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSW 512
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALIS Y+QN + + F QM++ G KP+ + SVL A ++ ++
Sbjct: 513 NALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
Y +S++D+ R + D+A L T + +E+ W++++
Sbjct: 573 IYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVL 619
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/568 (40%), Positives = 333/568 (58%), Gaps = 7/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VH +++ S F DI+M N+++ Y+ G L+EA +F M KD+V+W
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSW 368
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+ + P A+ + M G+ P++ TL SVL A D G ++H +
Sbjct: 369 TAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLD-LGIRLHEIAI 427
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V V +SL+DMY++ +D+A +F + KN VSW +LI G + +AL
Sbjct: 428 KTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALL 487
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M +E +P + SV +A A G+L +GK +HAH +++G F+ N ++DMY
Sbjct: 488 FFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G A FN K+DV +WN +LTG AQ G K V F+KML I P+++TF+
Sbjct: 547 RCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFIS 605
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS +G++ EG YF +MK K+ + P HY VD+LGRAG LD A FI++MPI
Sbjct: 606 LLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIR 665
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AA+WGALL ACR+H+NVELG AA+R+FE D G +ILL N+YA G + ++ R
Sbjct: 666 PDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVR 725
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M+E G+ +P CSWVE K VH F++ D++H Q I+ K+K+ G+ S
Sbjct: 726 SLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKS 785
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
S + R HSE+ A+AF LI+T PG I + KN+ +C CH+ KF S +V
Sbjct: 786 SFTSEI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIV 844
Query: 541 EREIIVRDTNRFHHFRDGFCSCGD--YW 566
REI VRD +HHF+DG CSCGD YW
Sbjct: 845 RREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 215/424 (50%), Gaps = 5/424 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + +HAH++ F++D+ + N ++ Y KCG + AR LFD+MP +D ++W
Sbjct: 208 CAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISW 267
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY +N + LFS M L + P+ T+++V A +++ GR VH + +
Sbjct: 268 NAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL-LDNERLGRGVHGYVV 326
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + ++ + +SL+ MY+ ++++A +F+ +ESK+ VSW A+IA KA+
Sbjct: 327 KSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVE 386
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
T+ M EG P + SV +A A G L+ G +H IK+G V N+L+DMY+
Sbjct: 387 TYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYS 446
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K +++A +VF + ++VVSW S++ G + + +F +M + + PN VT +
Sbjct: 447 KCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLIS 505
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL+AC+ G L G+ A + GV + +D+ R G AL +
Sbjct: 506 VLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDV 565
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPH-DSGPHILLANIYASAGRLNDAARAR 420
TA W LL +L +++ EL+ H D I L + +G + +
Sbjct: 566 TA--WNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYF 623
Query: 421 KMMK 424
+MK
Sbjct: 624 NIMK 627
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 212/399 (53%), Gaps = 11/399 (2%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ + N +L+ + + G L +A +F +M +D+ +W L+ GY++ + A+ L+ +ML
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
++PN +T SVLK AG +D G+++HA +++G++ +V VG++L+ MY + +
Sbjct: 192 AEIRPNVYTFPSVLKTC-AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A LF + ++ +SWNA+I+G+ G + L FS M +P + ++V +A
Sbjct: 251 NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310
Query: 207 STGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ G+ VH +V+KS GG + + N+L+ MY+ G +E+AE VF+R+ +DVVSW
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDIS--MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSW 368
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+M+ H L V ++ M GI P+++T + VL+AC+ G LD G + K
Sbjct: 369 TAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+ + +D+ + +D AL+ R + + + W +L+ R++ ++
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS-WTSLILGLRINNR----SF 483
Query: 385 AAERIFELDPHDSGPH-ILLANIYASAGRLNDAARARKM 422
A F P+ + L ++ ++ R+ R +++
Sbjct: 484 EALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEI 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 41/290 (14%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+A++ ML E +Y ++ + ++G V+ V S L +GN L
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNAL 138
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ M+ + G++ DA VF ++ +RDV SWN ++ G A+ G + + +ML I PN
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE-------AHYVTFVDLLGRAGLLDR 349
TF VL C+ + G+ A + + G E + YV D+ L D+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 350 ALK---------------------------FIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +RE+ ++P + AC + N LG
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG 318
Query: 383 ----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
Y + F D + L +Y+S GRL +A M+ V
Sbjct: 319 RGVHGYVVKSEFGGDISMNNS---LIQMYSSLGRLEEAETVFSRMESKDV 365
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 337/568 (59%), Gaps = 34/568 (5%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCG-CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
+L S D+ NT++ A + L AR LFD MP +D +W+A++S + ++ QP
Sbjct: 83 LLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRA 142
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF-----------------GRQVHAF 119
A+ ++ +MLR + G+GA D++F GR++H
Sbjct: 143 ALAIYRRMLR--------------EPGGSGA-DNEFTASSALAAATAARCARAGRELHCH 187
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++ G D + V S+L DMYA+F ++DDA +F + ++ VSW A++ + +
Sbjct: 188 VVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEG 247
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R F M+R G P F+Y+ V A A S + GK VH + KS F G+ LV M
Sbjct: 248 FRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHM 307
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G + A +VF + K D+VSW +M++G AQ+G + F+ +L +G P+ VTF
Sbjct: 308 YSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTF 367
Query: 300 LCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+AC+HAGL+D+G G F +K K+G+E HY +DLL R+GL +RA I MP
Sbjct: 368 VGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMP 427
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P +W +LLG CR+HKNV L +AAE +FE++P + ++ LANIYAS G ++
Sbjct: 428 VKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVEN 487
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ M+ G+ K PA SW+E VH+F+ D +HPQ I+ +++ K+++ GYV D
Sbjct: 488 MRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVAD 547
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ VL + ++++ + HSE+LA+AF +I+TP GS I + KN+R+CGDCH+ K SK
Sbjct: 548 TGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISK 607
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V+REIIVRD+NRFHHF++G CSC DYW
Sbjct: 608 IVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H H++ D + + + + YAK G LD+AR +FD MPV+D+V+WTA++ Y
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ LF +M+R G+ PN+FT + VL+A A T +K G+QVH K + +
Sbjct: 241 AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRAC-AEFTSEKLGKQVHGRMAKSRTGDSCF 299
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
GS+L+ MY+++ M A +F + + VSW A+I+G+A+ + ++AL F +L G
Sbjct: 300 AGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSG 359
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWV-HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
F P H ++ V +A A G +++G + H+ K G + A ++D+ ++SG E A
Sbjct: 360 FRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419
Query: 250 EKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACS 307
E + N + +K + W S+L GC H + W+ I P N T++ + +
Sbjct: 420 EDMINTMPVKPNKFLWASLLGGCRIH--KNVRLAWWAAEALFEIEPENPATYVTLANIYA 477
Query: 308 HAGLLDEGQGYFALMKKHGV 327
GL DE + M+ G+
Sbjct: 478 SVGLFDEVENMRRTMELRGI 497
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 110/265 (41%), Gaps = 44/265 (16%)
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT-FSEMLREGFEPTHFSYSSVFT 203
+ DA L ++L S + S+N L+A R G + R F M R HFS+S++ +
Sbjct: 77 LPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRR----DHFSWSAIVS 132
Query: 204 ALASTGS--------------------------------------LEQGKWVHAHVIKSG 225
A G G+ +H HV++ G
Sbjct: 133 AHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRG 192
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
A V + L DMYAK G ++DA VF+R+ RDVVSW +ML G R F
Sbjct: 193 IDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFV 252
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M+R+GI PN+ T+ VL AC+ G+ M K V + + G
Sbjct: 253 RMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYG 312
Query: 346 LLDRALKFIREMPIEPTAAVWGALL 370
+ A++ R MP +P W A++
Sbjct: 313 DMGTAMRVFRGMP-KPDLVSWTAMI 336
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K + VH + S + + +++ Y+K G + A ++F MP D+V+W
Sbjct: 273 CAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSW 332
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY+QN QP+ A+ F +L G +P+ T VL A DK H+
Sbjct: 333 TAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKD 392
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
KYG + + ++D+ +R + A + + K N+ W +L+ G
Sbjct: 393 KYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGG 441
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/558 (41%), Positives = 338/558 (60%), Gaps = 6/558 (1%)
Query: 14 VHAHILGSAFKND---IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+HA+ L + + + + + +L+ YAKC L A ++F MPV++ VTW+ALI G+
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 71 NDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
D+ A LF ML GL + +++S L+ A D G Q+HA K G ++
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC-ASLADLHMGTQLHALIAKSGIHADL 342
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+SLL MYA+ +++A F + K+ +S+ AL++G + + E+A F +M
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
EP + S+ A + +L+ GK H VI G L + N+L+DMYAK G I+ +
Sbjct: 403 NMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VF+++ RDVVSWN+M+ G HGLGK F M G AP+ VTF+C++ ACSH+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+ EG+ +F M K+G+ P HY+ VDLL R GLLD A +FI+ MP++ VWGA
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGACR+HKN++LG + I +L P +G +LL+NI+++AGR ++AA R + K G
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK P SW+E ++H FV D +HP I+ + I IK++GY D+S VL ++
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEE 702
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+E+E L HSEKLA+AF ++S TI + KN+RVCGDCH+A K+ + V R IIVRD
Sbjct: 703 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 762
Query: 549 TNRFHHFRDGFCSCGDYW 566
TNRFHHF++G CSCG++W
Sbjct: 763 TNRFHHFKNGQCSCGNFW 780
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 196/383 (51%), Gaps = 13/383 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HAH + D+ + +++ Y +C AR +F +MP++D+V W
Sbjct: 110 CSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169
Query: 62 TALISGYSQNDQPENAII-LFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAF 119
A+++GY+ + +AI L GL+PN TL S+L + GA G +HA+
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ--GTSIHAY 227
Query: 120 CLKYGYDWN---VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
CL+ + N V +G++LLDMYA+ Q+ A +F + +N+V+W+ALI G
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTAL---ASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+A F +ML EG S +SV +AL AS L G +HA + KSG
Sbjct: 288 TEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L+ MYAK+G I +A F+ + +D +S+ ++L+GC Q+G + F+KM +
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ T + ++ ACSH L G+ + G+ E + + +D+ + G +D + +
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
+MP + W ++ +H
Sbjct: 466 FDKMPARDVVS-WNTMIAGYGIH 487
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 168/345 (48%), Gaps = 7/345 (2%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G L AR++FD +P D + ALI YS AI L+ MLR + PN++T VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
KA A D + GR +HA G +++V ++L+D+Y R + A +F + ++
Sbjct: 108 KACSA-LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V+WNA++AG+A A+ +M G P + S+ LA G+L QG +HA
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 220 HVIKS---GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ +++ + +G L+DMYAK + A +VF+ + R+ V+W++++ G
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLC-VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
F+ ML G+ T + L C+ L G AL+ K G+ +
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
+ + + +AGL++ A F E+ ++ T + +GALL C + E
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAE 390
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 14/332 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L +HA I S D+ N++L+ YAK G ++EA FDE+ VKD +++
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL+SG QN + E A ++F +M ++P+ T+ S++ A A + G+ H +
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA-LQHGKCSHGSVI 435
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + +SL+DMYA+ ++D + +F + +++ VSWN +IAG+ G++A
Sbjct: 436 IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATT 495
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSG--GQLVAFVGNTLVD 238
F M +GF P ++ + A + +G + +GK W K G ++ ++ +VD
Sbjct: 496 LFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVD 553
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP 294
+ A+ G +++A + + LK DV W ++L C H LGK R +K+ G
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG- 612
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
F+ + S AG DE + K G
Sbjct: 613 ---NFVLLSNIFSAAGRFDEAAEVRIIQKVKG 641
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 5/240 (2%)
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
L+ + Q+ A +F + + + ++NALI ++ A+ + MLR P
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
+++ V A ++ L G+ +HAH +G FV L+D+Y + A VF +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 256 LLKRDVVSWNSMLTGCAQHGL-GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ RDVV+WN+ML G A HG+ A + G+ PN T + +L + G L +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 315 GQGYFALMKKHGVEPEEAHYV---TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
G A + +E E + +D+ + L A + MP+ W AL+G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR-NDVTWSALIG 279
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/568 (40%), Positives = 333/568 (58%), Gaps = 7/568 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R VH +++ S F DI+M N+++ Y+ G L+EA +F M KD+V+W
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSW 368
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+ + P A+ + M G+ P++ TL SVL A D G ++H +
Sbjct: 369 TAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLD-LGIRLHEIAI 427
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V V +SL+DMY++ +D+A +F + KN VSW +LI G + +AL
Sbjct: 428 KTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALL 487
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M +E +P + SV +A A G+L +GK +HAH +++G F+ N ++DMY
Sbjct: 488 FFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G A FN K+DV +WN +LTG AQ G K V F+KML I P+++TF+
Sbjct: 547 RCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFIS 605
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS +G++ EG YF +MK K+ + P HY VD+LGRAG LD A FI++MPI
Sbjct: 606 LLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIR 665
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AA+WGALL ACR+H+NVELG AA+R+FE D G +ILL N+YA G + ++ R
Sbjct: 666 PDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVR 725
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M+E G+ +P CSWVE K VH F++ D++H Q I+ K+K+ G+ S
Sbjct: 726 SLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKS 785
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
S + R HSE+ A+AF LI+T PG I + KN+ +C CH+ KF S +V
Sbjct: 786 SFTSEI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIV 844
Query: 541 EREIIVRDTNRFHHFRDGFCSCGD--YW 566
REI VRD +HHF+DG CSCGD YW
Sbjct: 845 RREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 215/424 (50%), Gaps = 5/424 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + + +HAH++ F++D+ + N ++ Y KCG + AR LFD+MP +D ++W
Sbjct: 208 CAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISW 267
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY +N + LFS M L + P+ T+++V A +++ GR VH + +
Sbjct: 268 NAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL-LDNERLGRGVHGYVV 326
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + ++ + +SL+ MY+ ++++A +F+ +ESK+ VSW A+IA KA+
Sbjct: 327 KSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVE 386
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
T+ M EG P + SV +A A G L+ G +H IK+G V N+L+DMY+
Sbjct: 387 TYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYS 446
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K +++A +VF + ++VVSW S++ G + + +F +M + + PN VT +
Sbjct: 447 KCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLIS 505
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL+AC+ G L G+ A + GV + +D+ R G AL +
Sbjct: 506 VLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDV 565
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPH-DSGPHILLANIYASAGRLNDAARAR 420
TA W LL +L +++ EL+ H D I L + +G + +
Sbjct: 566 TA--WNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYF 623
Query: 421 KMMK 424
+MK
Sbjct: 624 NIMK 627
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 212/399 (53%), Gaps = 11/399 (2%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ + N +L+ + + G L +A +F +M +D+ +W L+ GY++ + A+ L+ +ML
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
++PN +T SVLK AG +D G+++HA +++G++ +V VG++L+ MY + +
Sbjct: 192 AEIRPNVYTFPSVLKTC-AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A LF + ++ +SWNA+I+G+ G + L FS M +P + ++V +A
Sbjct: 251 NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310
Query: 207 STGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ G+ VH +V+KS GG + + N+L+ MY+ G +E+AE VF+R+ +DVVSW
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDIS--MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSW 368
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+M+ H L V ++ M GI P+++T + VL+AC+ G LD G + K
Sbjct: 369 TAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+ + +D+ + +D AL+ R + + + W +L+ R++ ++
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS-WTSLILGLRINNR----SF 483
Query: 385 AAERIFELDPHDSGPH-ILLANIYASAGRLNDAARARKM 422
A F P+ + L ++ ++ R+ R +++
Sbjct: 484 EALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEI 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 41/290 (14%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+A++ ML E +Y ++ + ++G V+ V S L +GN L
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNAL 138
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ M+ + G++ DA VF ++ +RDV SWN ++ G A+ G + + +ML I PN
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE-------AHYVTFVDLLGRAGLLDR 349
TF VL C+ + G+ A + + G E + YV D+ L D+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 350 ALK---------------------------FIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +RE+ ++P + AC + N LG
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG 318
Query: 383 ----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
Y + F D + L +Y+S GRL +A M+ V
Sbjct: 319 RGVHGYVVKSEFGGDISMNNS---LIQMYSSLGRLEEAETVFSRMESKDV 365
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/595 (40%), Positives = 332/595 (55%), Gaps = 46/595 (7%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + ++ D A+ + AYA G LD A L P V +T+ I +S
Sbjct: 43 IHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGL 102
Query: 74 PENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
A+ L S+ML R GL P TLS+ L A G A GR +H + +K YV
Sbjct: 103 HRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLAV----GRALHGYAVKLALSGEPYV 158
Query: 132 GSSLLDMY--------------------------------ARFDQMDDAWFLFTALESKN 159
++LL MY A+ Q+DDA LF AL K+
Sbjct: 159 ATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKD 218
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V WNA++ G+ + +ALR F +MLR G EP S +A+A G+ E G+W+H+
Sbjct: 219 LVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHS 278
Query: 220 HVIKSGGQ----LVAFVGNTLVDMYAKSGSIEDAEKVFNRLL---KRDVVSWNSMLTGCA 272
V G + L A VG LVDMY K GS+E+A VF L RDVV+WN+M+ G A
Sbjct: 279 FVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYA 338
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEE 331
HG + + F ++ G+ P +TF+ VL ACSH+GL+DEG+ FA M++ +G+ P+
Sbjct: 339 MHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKV 398
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGRAG ++ A ++ M +P AA+W +LLGACR+HKN+ LG A+ +
Sbjct: 399 EHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVG 458
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
+SG ++LL+N+YA+AG+ + R R MM+ SGV+KEP CS VE V FVA D
Sbjct: 459 NGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDR 518
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
+HP+ A I+ K E++ + G+VP + VL D +E L VHSEKLALAF LIST
Sbjct: 519 SHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLIST 578
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PP + I I KN+R C DCH+ K S+ R+I+ RD NRFHHF DG CSCGDYW
Sbjct: 579 PPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 173/365 (47%), Gaps = 45/365 (12%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNA------------------------------- 36
L R +H + + A + + +L
Sbjct: 137 LAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLS 196
Query: 37 -YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT 95
YAK G LD+AR LFD +P KD+V W A++ GY+Q+ +P A+ LF QMLR G++P++ +
Sbjct: 197 CYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVS 256
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYG----YDWNVYVGSSLLDMYARFDQMDDAWFL 151
+ L A T + GR +H+F G N VG++L+DMY + +++A +
Sbjct: 257 VVLALSAVAQLGTAES-GRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAV 315
Query: 152 FTALES---KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
F L ++ V+WNA+I G+A +AL F ++ +G PT ++ V A + +
Sbjct: 316 FRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHS 375
Query: 209 GSLEQGKWVHAHVIKSGGQL--VAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWN 265
G +++G+ + A + + G + V G +VD+ ++G +E+A + + K D W
Sbjct: 376 GLVDEGRALFAAMEEEYGIVPKVEHYG-CMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWA 434
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
S+L C H R + ++ NG+A N T++ + + AG E ++M+
Sbjct: 435 SLLGACRLHKNLALGQRVADYLVGNGLA-NSGTYVLLSNMYAAAGKWREVGRVRSMMRAS 493
Query: 326 GVEPE 330
GV+ E
Sbjct: 494 GVQKE 498
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/551 (41%), Positives = 333/551 (60%), Gaps = 7/551 (1%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F++D + +++AYA G L AR++FDE PVK + W AL+ + D E A+ +
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATD----DKFGRQVHAFCLKYGYDWNVYVGSSLLDM 138
M RL + + ++ + LKA A +T R++HA ++ GY + +V ++L+D
Sbjct: 170 DMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDC 229
Query: 139 YARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR--EGFEPTHF 196
YA+ + A +F + +N VSW A+I +A+ A+ F EM+ E P
Sbjct: 230 YAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSV 289
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ + A A +L QGK +HA++++ G + V N L+ MY K G +E +F+ +
Sbjct: 290 TIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLI 349
Query: 257 LKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
R DVVSWN++++G HG G V+ FE M + G++PN +TF+ VL ACSHAGL+DEG
Sbjct: 350 GHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEG 409
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+ F M + V P HY VDLLGRAG LD A++ I+ M I P+ VWG+LLGACR+
Sbjct: 410 KRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRI 469
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H++VE A ++F+L+P ++G ++LLA+IYA A ++ + +++E ++K P CS
Sbjct: 470 HRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGCS 529
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E K +HMFV+ D+ +PQ + E ++K GYVPD+ VL +++E+E L
Sbjct: 530 WIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKIL 589
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AF LI+T G I I KN+R+C DCHS KF SK EREIIVRD NRFHHF
Sbjct: 590 LGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRFHHF 649
Query: 556 RDGFCSCGDYW 566
RDG CSCGDYW
Sbjct: 650 RDGICSCGDYW 660
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 146/276 (52%), Gaps = 5/276 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+H+ R +HAH + + + T+++ YAK G + A +F MP +++V+WT
Sbjct: 196 SHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWT 255
Query: 63 ALISGYSQNDQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
A+I Y++N++P +AI+LF +M+ L PN T+ +L A AG G+ +HA+
Sbjct: 256 AMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAF-AGVNALGQGKLLHAYI 314
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
L+ G+D V V ++L+ MY + ++ +F + K+ VSWN LI+G+ G +A
Sbjct: 315 LRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEA 374
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F +M + G P ++ SV A + G +++GK + ++ A +VD+
Sbjct: 375 VQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDL 434
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
++G +++A ++ + ++ W S+L C H
Sbjct: 435 LGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRIH 470
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/542 (41%), Positives = 318/542 (58%), Gaps = 10/542 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D N +L Y + + A F++MPVKD+ +W LISG++QN Q + A LFS M
Sbjct: 135 DSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM- 193
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
P + +S SG D G +V V +++L Y +F ++
Sbjct: 194 -----PEKNGVSWSAMISGYVEHGDL--EAAEELYKNVGMK-SVVVETAMLTGYMKFGKV 245
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A +F + KN V+WN++IAG+ E L+ F M+ P S SSV
Sbjct: 246 ELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGC 305
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++ +L G+ +H V KS +L+ MY K G ++ A K+F + ++DV++WN
Sbjct: 306 SNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWN 365
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M++G AQHG G+ + F+KM + P+ +TF+ V+ AC+HAG +D G YF MKK
Sbjct: 366 AMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKE 425
Query: 326 -GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+E + HY +DLLGRAG LD A+ I+EMP P AA++G LLGACR+HKN++L +
Sbjct: 426 FGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEF 485
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA + LDP + ++ LANIYA+ + + A+ RKMMKE V K P SW+E K+ H
Sbjct: 486 AARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTH 545
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F ++D HP+ IHKK E+ K+K GYVPD L +++ +E L HSEKLA+
Sbjct: 546 EFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAI 605
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF L+ T PG+ I + KN+RVCGDCH A KF S + +REIIVRDT RFHHFR+GFCSCGD
Sbjct: 606 AFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGD 665
Query: 565 YW 566
YW
Sbjct: 666 YW 667
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L R +H + S D ++++ Y KCG LD A KLF EMP KD++TW
Sbjct: 305 CSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITW 364
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ A+ LF +M +KP+ T +V+ A D + +
Sbjct: 365 NAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKK 424
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
++G + + ++D+ R ++D+A
Sbjct: 425 EFGIEAKPVHYTCVIDLLGRAGRLDEA 451
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 339/565 (60%), Gaps = 4/565 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
HL +L R HA+ + D+ + NT+++ Y KCG ++ + K+F+ M ++D ++WT
Sbjct: 379 HLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTT 438
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+++ ++Q+ + A+ + ++ + G+ + + S+L+ G +QVH + ++
Sbjct: 439 ILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC-CGLKSISLLKQVHCYAIRN 497
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G ++ + + L+D+Y + D + LF +E K+ VSW ++I A+ F
Sbjct: 498 GL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLF 556
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+EM + +P + S+ A+A SL +GK VH +I+ + V ++LVDMY+
Sbjct: 557 TEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGC 616
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GS+ A +VF R +DVV W +M+ HG GK + F++ML+ G+ P+ V+FL +L
Sbjct: 617 GSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL 676
Query: 304 TACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH+ L++EG+ Y +M K+ ++P + HY VD+LGR+G + A +FI+ MP++P
Sbjct: 677 YACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPK 736
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+AVW ALLGACR+H+N L AA ++ EL+P + G +IL++N++A G+ N+A R
Sbjct: 737 SAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTR 796
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSH 481
M E G++K PACSW+E N +H F + D H IH K EI+E + ++ GYV D+
Sbjct: 797 MAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRF 856
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL ++E+ L HSE++A+AF LIST PG I I KN+RVCGDCH K SK+ E
Sbjct: 857 VLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFE 916
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+I+VRD NRFHHF G CSC D+W
Sbjct: 917 RDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 185/358 (51%), Gaps = 10/358 (2%)
Query: 10 EARIVHAHILGSAFKN---DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
E R VHAH + + N D + ++ Y +CG +D+AR+LF+ MP + + +W AL+
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 67 GYSQNDQPENAIILFSQM---LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
Y + A+ ++ M G P+ TL+SVLKA GA D + G +VH +K
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEG-DGRCGGEVHGLAVKV 193
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE--SKNEVSWNALIAGHARKSEGEKALR 181
G D + V ++L+ MYA+ +D A +F L+ +++ SWN++++G + +AL
Sbjct: 194 GLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALA 253
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M GF ++ +V A G L G+ +HA ++K G +L N L+ MYA
Sbjct: 254 LFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSEL-NIQCNALLVMYA 312
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A +VF ++ ++D +SWNSML+ Q+ + +F +ML++G P+ +
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ +A H L+ G+ + A K + + T +D+ + G ++ + K M I
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGI 430
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 229/505 (45%), Gaps = 62/505 (12%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMVTWTALISGYSQN 71
VH + + N ++ YAKCG LD A ++F+ + +D+ +W +++SG QN
Sbjct: 186 VHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQN 245
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ A+ LF M G N +T +VL+ A GR++HA LK G + N+
Sbjct: 246 GRTLEALALFRGMQSAGFPMNSYTSVAVLQVC-AELGLLSLGRELHAALLKCGSELNIQC 304
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++LL MYA++ ++D A +F + K+ +SWN++++ + + S +A+ F EML+ GF
Sbjct: 305 -NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGF 363
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P H S+ +AL L G+ HA+ IK VGNTL+DMY K GSIE + K
Sbjct: 364 QPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAK 423
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS---- 307
VF + RD +SW ++L AQ + ++ + GI + + +L C
Sbjct: 424 VFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKS 483
Query: 308 ------------HAGLLDE-------------GQGYFALMKKHGVEPEE-AHYVTFVDLL 341
GLLD G+ +L VE ++ + + ++
Sbjct: 484 ISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCC 543
Query: 342 GRAGLLDRALKFIREMP---IEPTA----AVWGALLGACRMHKNVELGAYAAERIFELDP 394
G L+ A+ EM I+P + ++ A+ G + K ++ + R F ++
Sbjct: 544 TNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIE- 602
Query: 395 HDSGPHI-LLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAH 453
GP + L ++Y+ G +N A R + K V W NA M H
Sbjct: 603 ---GPVVSSLVDMYSGCGSMNYAIRVFERAKCKDV-----VLWTAMINATGM-----HGH 649
Query: 454 PQRAMIHKKWREISEKIKQIGYVPD 478
++A+ ++ +++ Q G PD
Sbjct: 650 GKQAI------DLFKRMLQTGLTPD 668
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVG 233
E LR L P Y V +A+ + +G+ VHAH + +G F+
Sbjct: 39 EGDLRQALRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLA 98
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--- 290
LV MY + G ++DA ++FN + R V SWN+++ G +R + M +
Sbjct: 99 TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G AP+ T VL AC G G L K G++ + + + GLLD A
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSA 218
Query: 351 LKFIREMPIEP-TAAVWGALLGAC 373
L+ + + A W +++ C
Sbjct: 219 LRVFEWLQQDARDVASWNSVVSGC 242
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/558 (41%), Positives = 338/558 (60%), Gaps = 6/558 (1%)
Query: 14 VHAHILGSAFKND---IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+HA+ L + + + + + +L+ YAKC L A ++F MPV++ VTW+ALI G+
Sbjct: 224 IHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVL 283
Query: 71 NDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
D+ A LF ML GL + +++S L+ A D G Q+HA K G ++
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC-ASLADLHMGTQLHALIAKSGIHADL 342
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+SLL MYA+ +++A F + K+ +S+ AL++G + + E+A F +M
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
EP + S+ A + +L+ GK H VI G L + N+L+DMYAK G I+ +
Sbjct: 403 NMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+VF+++ RDVVSWN+M+ G HGLGK F M G AP+ VTF+C++ ACSH+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 310 GLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+ EG+ +F M K+G+ P HY+ VDLL R GLLD A +FI+ MP++ VWGA
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LLGACR+HKN++LG + I +L P +G +LL+NI+++AGR ++AA R + K G
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK P SW+E ++H FV D +HP I+ + I IK++GY D+S VL ++
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEE 702
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+E+E L HSEKLA+AF ++S TI + KN+RVCGDCH+A K+ + V R IIVRD
Sbjct: 703 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 762
Query: 549 TNRFHHFRDGFCSCGDYW 566
TNRFHHF++G CSCG++W
Sbjct: 763 TNRFHHFKNGQCSCGNFW 780
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 196/383 (51%), Gaps = 13/383 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HAH + D+ + +++ Y +C AR +F +MP++D+V W
Sbjct: 110 CSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169
Query: 62 TALISGYSQNDQPENAII-LFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAF 119
A+++GY+ + +AI L GL+PN TL S+L + GA G +HA+
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ--GTSIHAY 227
Query: 120 CLKYGYDWN---VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
CL+ + N V +G++LLDMYA+ Q+ A +F + +N+V+W+ALI G
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTAL---ASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+A F +ML EG S +SV +AL AS L G +HA + KSG
Sbjct: 288 TEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+L+ MYAK+G I +A F+ + +D +S+ ++L+GC Q+G + F+KM +
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ T + ++ ACSH L G+ + G+ E + + +D+ + G +D + +
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
+MP + W ++ +H
Sbjct: 466 FDKMPARDVVS-WNTMIAGYGIH 487
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 168/345 (48%), Gaps = 7/345 (2%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G L AR++FD +P D + ALI YS AI L+ MLR + PN++T VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
KA A D + GR +HA G +++V ++L+D+Y R + A +F + ++
Sbjct: 108 KACSA-LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V+WNA++AG+A A+ +M G P + S+ LA G+L QG +HA
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226
Query: 220 HVIKS---GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ +++ + +G L+DMYAK + A +VF+ + R+ V+W++++ G
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLC-VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
F+ ML G+ T + L C+ L G AL+ K G+ +
Sbjct: 287 MTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
+ + + +AGL++ A F E+ ++ T + +GALL C + E
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAE 390
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 14/332 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L +HA I S D+ N++L+ YAK G ++EA FDE+ VKD +++
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL+SG QN + E A ++F +M ++P+ T+ S++ A A + G+ H +
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA-LQHGKCSHGSVI 435
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + +SL+DMYA+ ++D + +F + +++ VSWN +IAG+ G++A
Sbjct: 436 IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATT 495
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSG--GQLVAFVGNTLVD 238
F M +GF P ++ + A + +G + +GK W K G ++ ++ +VD
Sbjct: 496 LFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVD 553
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP 294
+ A+ G +++A + + LK DV W ++L C H LGK R +K+ G
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTG- 612
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
F+ + S AG DE + K G
Sbjct: 613 ---NFVLLSNIFSAAGRFDEAAEVRIIQKVKG 641
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
L+ + Q+ A +F + + + ++NALI ++ A+ + MLR P
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
+++ V A ++ L G+ +HAH +G FV L+D+Y + A VF +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 256 LLKRDVVSWNSMLTGCAQHGL-GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ RDVV+WN+ML G A HG+ A + G+ PN T + +L + G L +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 315 GQGYFALMKKHGVEPEEAHYV---TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
G A + +E E + +D+ + L A + MP+ W AL+G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR-NDVTWSALIG 279
Query: 372 A 372
Sbjct: 280 G 280
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 323/545 (59%), Gaps = 3/545 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
K + N ++N Y + G L ARK+FDEMP + + TW A+I+G Q + E + LF +
Sbjct: 22 KKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFRE 81
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M LG P+++TL SV S AG G+Q+H + +KYG + ++ V SSL MY R
Sbjct: 82 MHGLGFSPDEYTLGSVFSGS-AGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNG 140
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++ D + ++ +N V+WN LI G+A+ E L + M G P ++ +V +
Sbjct: 141 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 200
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ + QG+ +HA IK G V V ++L+ MY+K G + DA K F+ D V
Sbjct: 201 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 260
Query: 264 WNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
W+SM++ HG G ++ F M + + N+V FL +L ACSH+GL D+G F +M
Sbjct: 261 WSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMM 320
Query: 323 -KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+K+G +P HY VDLLGRAG LD+A I+ MPI+P +W LL AC +HKN E+
Sbjct: 321 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEM 380
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
+ I E+DP+DS ++LLAN++ASA R D + RK M++ VKKE SW E K
Sbjct: 381 AQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKG 440
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
VH F D + + I+ +E++ ++K GY PD++ VL D++E+E+ L HSEK
Sbjct: 441 EVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEK 500
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+AFAL+ P G+ I I KN+RVC DCH AFK+ S ++ REI +RD +RFHHF +G CS
Sbjct: 501 LAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCS 560
Query: 562 CGDYW 566
CGDYW
Sbjct: 561 CGDYW 565
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 159/308 (51%), Gaps = 7/308 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + + +H + + + D+ + +++ + Y + G L + + MPV+++V W L
Sbjct: 104 LRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G +QN PE + L+ M G +PN+ T +VL + A + G+Q+HA +K G
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ-GQQIHAEAIKIG 222
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
V V SSL+ MY++ + DA F+ E ++EV W+++I+ + +G++A++ F+
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFN 282
Query: 185 EMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAK 242
M + E ++ ++ A + +G ++G + +++ G T +VD+ +
Sbjct: 283 SMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 342
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+G ++ AE + + +K D V W ++L+ C H + + F+++L I PN +
Sbjct: 343 AGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE--IDPND-SACY 399
Query: 302 VLTACSHA 309
VL A HA
Sbjct: 400 VLLANVHA 407
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + +HA + + +A+ +++++ Y+KCGCL +A K F E +D V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+++IS Y + Q + AI LF+ M + ++ N+ ++L A DK
Sbjct: 262 SSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKA 179
KYG+ + + ++D+ R +D A + ++ K + V W L++ E A
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMA 381
Query: 180 LRTFSEML 187
+ F E+L
Sbjct: 382 QKVFKEIL 389
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/603 (38%), Positives = 346/603 (57%), Gaps = 69/603 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C+ L++ + +HAH + + F ++ + +++ YAKC C+ EA LF+ P K + V
Sbjct: 148 CSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVL 207
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTA+++GYSQN AI F M G++ NQFT S+L A G+ + FG QVH
Sbjct: 208 WTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGS-ISACGFGAQVHGCI 266
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G+ NV+VGS+L+DMY++ + +A + +E + VSWN++I G R+ GE+AL
Sbjct: 267 VRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEAL 326
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M + F+Y S+ V N LVDMY
Sbjct: 327 SLFRIMHLRHMKIDEFTYPSL------------------------------VNNALVDMY 356
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G + A VF ++ +DV+SW S++TGC +G + +R F +M GI P+Q+
Sbjct: 357 AKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIA 416
Query: 301 CVLTACSHA--------GLLDE----------------------------GQGYFALMKK 324
VL+A ++ G +++ G+ YF M++
Sbjct: 417 AVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEE 476
Query: 325 -HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+G++P HY +DLLGR+G L A + + +M ++P A VW ALL ACR+H NVELG
Sbjct: 477 VYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGE 536
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
AA +FEL+P ++ P++LL+N+Y++AG+ +AA+ R++MK GV KEP CSW+E + V
Sbjct: 537 RAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKV 596
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F++ D +HP+ A I+ K EI IK+ GYVPD + L D++ +E L HSEKLA
Sbjct: 597 HRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLA 656
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF L++ PPG+ I I KN+R+CGDCH+A K+ S V R +I+RD+N FHHFR+G CSC
Sbjct: 657 VAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCS 716
Query: 564 DYW 566
DYW
Sbjct: 717 DYW 719
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 7/248 (2%)
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN +G+ YA ++++A LF ++ ++W++LI+G+ R +AL F EM
Sbjct: 75 WNTMIGA-----YANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEM 129
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
EG P F++ SV + LE+GK +HAH IK+ AFV LVDMYAK I
Sbjct: 130 QYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCI 189
Query: 247 EDAEKVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+AE +F KR+ V W +M+TG +Q+G G + F M GI NQ TF +LTA
Sbjct: 190 LEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTA 249
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C G + + G VD+ + G L A + + M ++ +
Sbjct: 250 CGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS- 308
Query: 366 WGALLGAC 373
W +++ C
Sbjct: 309 WNSMIVGC 316
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 31/168 (18%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM-------------------------- 267
N ++ +K G ++DA K+F+ + RD SWN+M
Sbjct: 45 NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104
Query: 268 -----LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
++G ++G + F +M G PNQ T+ VL CS LL++G+ A
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
K + VD+ + + A P + +W A++
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMV 212
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/573 (39%), Positives = 339/573 (59%), Gaps = 14/573 (2%)
Query: 2 CTHLKKLKEARIVHAHI------LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV 55
C + + R +H H+ G A + + N++++ YAK G LD+A +LF MP
Sbjct: 76 CVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQ 135
Query: 56 KDMVTWTALISGYSQND-QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR 114
+++V+WT +++ + + + A+ +M R G+ N +T SSVL A G
Sbjct: 136 RNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVL----A 191
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+HA +K G D +V+V SSL+D Y + +D +F + + + V WN++IAG A+
Sbjct: 192 AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSG 251
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+G A+ F M GF + +SV A LE G+ VHAHV+K L+ + N
Sbjct: 252 DGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDLI--LHN 309
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+DMY K G + DA+ +F+R+ RDV+SW++M++G AQ+G ++ F+ M G P
Sbjct: 310 ALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTP 369
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
N +T + VL ACSHAGL+++G YF M K G++PE H VDLLGRAG LD A+KF
Sbjct: 370 NNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKF 429
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I EM EP + +W LLGACRMHKN L +YAA I +L+P D G ILL+NIYA +
Sbjct: 430 IGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQW 489
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
++A ++ K M++ GVKKEP SW+E VH+F+A + +HP I ++ + + K +
Sbjct: 490 SNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDL 549
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GYVP + VL +++E L+ HSEKLA+AF +++ G + I KN+R+CGDCH+
Sbjct: 550 GYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFA 609
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK + II+RD RFHHF+ G CSCGDYW
Sbjct: 610 KLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 333/563 (59%), Gaps = 5/563 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L LKE +H + L F D + N + +YAKCG L A+++F + K + +W AL
Sbjct: 395 LPSLKE---LHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNAL 451
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY+Q+ P ++ QM GL P+ FT+ S+L A + + G++VH F ++
Sbjct: 452 IGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSAC-SKLKSLRLGKEVHGFIIRNW 510
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +++V S+L +Y ++ LF A+E + VSWN +I GH + E+AL F
Sbjct: 511 LERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFR 570
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M+ G +P S +VF A + SL G+ HA+ +K + AF+ +++DMYAK+G
Sbjct: 571 QMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG 630
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+I + KVFN L ++ SWN+M+ G HG K ++ FE+M R G P+ +TFL VLT
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLT 690
Query: 305 ACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC+H+GLL EG Y MK G++P HY +D+LGRAG LD AL+ EM EP
Sbjct: 691 ACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDV 750
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W +LL CR+H+N+E+G A ++F L+P ++LL+N+YA G+ +D + R+ M
Sbjct: 751 GIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRM 810
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
KE ++K+ CSW+E V FV + I W + KI ++GY PD+S V
Sbjct: 811 KEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQ 870
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
++E+ +L+ HSEKLA+ + LI T G+T+ + KN+R+C DCH+A K SKV+ERE
Sbjct: 871 HDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMERE 930
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I+VRD RFHHF GFCSCGDYW
Sbjct: 931 IVVRDNKRFHHFNKGFCSCGDYW 953
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 149/276 (53%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK L+ + VH I+ + + D+ + ++L+ Y CG L + LFD M +V+W
Sbjct: 490 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSW 549
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G+ QN PE A+ LF QM+ G++P ++ +V A + GR+ HA+ L
Sbjct: 550 NTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSL-LPSLRLGREAHAYAL 608
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+ + N ++ S++DMYA+ + + +F L+ K+ SWNA+I G+ ++A++
Sbjct: 609 KHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIK 668
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F EM R G P ++ V TA +G L +G + +KS L + + ++DM
Sbjct: 669 LFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEG-LRYLDQMKSSFGLKPNLKHYACVIDM 727
Query: 240 YAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH 274
++G +++A +V + + DV WNS+L+ C H
Sbjct: 728 LGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIH 763
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 170/372 (45%), Gaps = 20/372 (5%)
Query: 6 KKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
K ++ R +H + GS ++D + I+ YA CG D++R FD + K++ W A+
Sbjct: 98 KDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAV 157
Query: 65 ISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
IS YS+N+ + +F +M+ + L P+ FT V+KA AG +D G VH +K
Sbjct: 158 ISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC-AGISDVGIGLAVHGLVVKT 216
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +++VG++L+ Y + DA LF + +N VSWN++I R F
Sbjct: 217 GLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI-------------RVF 263
Query: 184 SEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
S+ +G F P + +V A + GK VH +K V N L+DMY+K
Sbjct: 264 SDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSK 323
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQVTFL 300
G I D++ +F ++VVSWN+M+ G + G T +ML + ++VT L
Sbjct: 324 WGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTIL 383
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+ C +L + K +E FV + G L A + +
Sbjct: 384 NAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIR-S 442
Query: 361 PTAAVWGALLGA 372
T W AL+G
Sbjct: 443 KTLNSWNALIGG 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 207/476 (43%), Gaps = 63/476 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + VH ++ + D+ + N +++ Y G + +A KLFD MP +++V+W
Sbjct: 197 CAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSW 256
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I +S N P+ T+ +VL A + G+ VH + +
Sbjct: 257 NSMIRVFSDNGDDG------------AFMPDVATVVTVLPVC-AREREIGVGKGVHGWAV 303
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D + V ++L+DMY+++ + D+ +F +KN VSWN ++ G + + +
Sbjct: 304 KLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFD 363
Query: 182 TFSEMLREGFEPTHFSYSSVFTALA---STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ML G E ++ A+ L K +H + +K + N V
Sbjct: 364 LLRQML-AGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVA 422
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
YAK GS+ A++VF+ + + + SWN+++ G AQ + ++ +M +G+ P+ T
Sbjct: 423 SYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFT 482
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL----------- 347
+L+ACS L G+ + ++ +E + Y++ + L G L
Sbjct: 483 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAME 542
Query: 348 --------------------DRALKFIREMP---IEPTAAVWGALLGACRMHKNVELG-- 382
+RAL R+M I+P + GAC + ++ LG
Sbjct: 543 DNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGRE 602
Query: 383 --AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
AYA + + E + + I ++YA G + +++ +G+K++ A SW
Sbjct: 603 AHAYALKHLLEDNAFIACSII---DMYAKNGAITQSSKVF-----NGLKEKSAASW 650
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 18/280 (6%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCL-KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
L +L+ASG D + GR++H + + + ++ MYA DD+ F A
Sbjct: 87 LGLLLQASGK-RKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQ 213
L SKN WNA+I+ ++R + L F +M+ + P +F++ V A A +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGI 205
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G VH V+K+G FVGN LV Y G + DA K+F+ + +R++VSWNSM+ +
Sbjct: 206 GLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSD 265
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+G A P+ T + VL C+ + G+G K ++ E
Sbjct: 266 NGDDGA------------FMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVV 313
Query: 334 YVTFVDLLGRAG-LLDRALKFIREMPIEPTAAVWGALLGA 372
+D+ + G ++D + F ++ W ++G
Sbjct: 314 NNALMDMYSKWGCIIDSQMIF--KLNNNKNVVSWNTMVGG 351
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/602 (37%), Positives = 349/602 (57%), Gaps = 41/602 (6%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KC + ++AR +L D T++ Y + G + AR +F+E+ K V
Sbjct: 206 KCESPEATRDAR----KVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVV 261
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+ISGY + A LF +M+ + ++FT +SVL A A G+ VH
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSAC-ANVGLFAHGKSVHGQI 320
Query: 121 LKYGYDW----NVYVGSSLLDMYAR----------FDQM--------------------- 145
++ ++ + V ++L+ Y++ FD M
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D A +F + KNE+SW +++G+ E AL+ F++M E +P ++Y+ A
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G+L+ GK +H H+++ G + GN L+ MYA+ G++++A +F + D VSWN
Sbjct: 441 GELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWN 500
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M++ QHG G+ + F++M+ GI P++++FL VLTAC+H+GL+DEG YF MK+
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRD 560
Query: 326 -GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+ P E HY +DLLGRAG + A I+ MP EPT ++W A+L CR ++ELGA+
Sbjct: 561 FGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+++F++ P G +ILL+N Y++AG DAAR RK+M++ GVKKEP CSW+E N VH
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVH 680
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
+F+ D HP+ ++K + K++++GYVPD+ VL + ++E L HSE+LA+
Sbjct: 681 VFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAV 740
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
F L++ PPG+T+ + KN+R+C DCH+A F SK V REI+VRD RFHHF+DG CSCG+
Sbjct: 741 GFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGN 800
Query: 565 YW 566
YW
Sbjct: 801 YW 802
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 161/359 (44%), Gaps = 46/359 (12%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+++ AYA L A FD +P +D V A+IS Y++ A+ +F +L G
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 89 -LKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----- 141
L+P+ ++ +++L A G + Q+H LK G + V ++L+ +Y +
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 142 --------FDQM----DDAWF-----------------LFTALESKNEVSWNALIAGHAR 172
D+M D W +F ++ K +V WNA+I+G+
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-- 230
+A F M+ E F+++SV +A A+ G GK VH +I+ V
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331
Query: 231 --FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
V N LV Y+K G+I A ++F+ + +DVVSWN++L+G + V FE+M
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
N+++++ +++ H G ++ F M+ V+P + Y + G G L
Sbjct: 392 YK----NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGAL 446
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 327/566 (57%), Gaps = 35/566 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ VH I+ ++ + N ++ Y KCGCL EARK+ D+MP +D+V+W
Sbjct: 147 CSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSW 206
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++GY+Q+ Q ++A+ + +M L L + T++S+
Sbjct: 207 NSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL---------------------- 244
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
S + Y + + +F + KN +SWN +IA + S +A+
Sbjct: 245 ------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVS 292
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G +P + +S+ A +L G+ +H ++ K Q + N L+DMYA
Sbjct: 293 LFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYA 352
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E+A VF+++ RDVVSW SM++ + G G V F KML +G P+ + F+
Sbjct: 353 KCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVS 412
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GLLD+G+ YF +M +++G+ P H+ VDL GRAG ++ A FI++MP+E
Sbjct: 413 VLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPME 472
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VWGALL ACR+H +++G AA+ +F+L P SG ++LL+NIYA AG D R
Sbjct: 473 PNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVR 532
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK+ G+KK P S VE VH F+A D HPQ I+ + + K+K++GY+P +
Sbjct: 533 YAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTE 592
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L + +++E L +HSEKLA+ FA+++T G+ I I KN+RVCGDCH A K SK+V
Sbjct: 593 SALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIV 652
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHF +G CSCGDYW
Sbjct: 653 SRNIIVRDCNRFHHFSNGICSCGDYW 678
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 346/565 (61%), Gaps = 12/565 (2%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVTWTALISGYSQ 70
R +HA + + + +++ N ++ +Y+K G L EAR++F + +D V+W +++ Y Q
Sbjct: 158 RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQ 217
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ + A+ L+ +M GL + FTL+SVL A D G Q HA +K GY N +
Sbjct: 218 HREGSKALELYLEMTVRGLIVDIFTLASVLTAF-TNVQDLLGGLQFHAKLIKSGYHQNSH 276
Query: 131 VGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKALRTFSEMLR 188
VGS L+D+Y++ M D +F + + + V WN +I+G++ + ++AL F ++
Sbjct: 277 VGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQG 336
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSI 246
G P S V +A ++ S QG+ VH +K ++ V N L+ MY+K G++
Sbjct: 337 VGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRIS-VNNALIAMYSKCGNL 395
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA+ +F+ + + + VS+NSM+ G AQHG+G ++ F++ML P +TF+ VL AC
Sbjct: 396 RDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAAC 455
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+H G +++G+ YF +MK K G+EPE H+ +DLLGRAG L A + I +P +P
Sbjct: 456 AHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFX 515
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W ALLGACR+H NVEL AA R+ +LDP ++ P+++LANIY+ GRL DAA RK+M++
Sbjct: 516 WSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRD 575
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKK+P CSW+E +H+FVA D HP I + E+ KIK++GY P+
Sbjct: 576 RGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVG 635
Query: 486 AD----QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
D Q+E E +L HSEKLA++F L+ST G I + KN+R+C DCH+A K+ S+VV+
Sbjct: 636 GDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVK 695
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI VRD++RFH F+DG CSCG YW
Sbjct: 696 REITVRDSHRFHCFKDGQCSCGGYW 720
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 205/410 (50%), Gaps = 16/410 (3%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
NT+++AYAK ++ A +LFDEMP D V++ LI+ Y++ + A LF +M L
Sbjct: 78 NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS ++ A G RQ+HA + G D V VG++L+ Y++ + +A
Sbjct: 138 MDGFTLSGIITACGINV---GLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194
Query: 151 LFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F L E ++EVSWN+++ + + EG KAL + EM G F+ +SV TA +
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK-SGSIEDAEKVFNRLLKRDVVSWNSML 268
L G HA +IKSG + VG+ L+D+Y+K G + D KVF+ + D+V WN+M+
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMI 314
Query: 269 TGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+G + + L + F ++ G P+ + +CV++ACS+ +G+ L K +
Sbjct: 315 SGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDI 374
Query: 328 EPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
P V + + + G L A MP E + +++ H +
Sbjct: 375 -PSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 386 AERIFELDPHDSGPHILLANIYAS---AGRLNDAARARKMMKES-GVKKE 431
+R+ E+D + +I ++ A+ GR+ D MMK+ G++ E
Sbjct: 433 FQRMLEMDF--TPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPE 480
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 176/333 (52%), Gaps = 11/333 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC-GCLDEARKLFDEMPVKDMVTW 61
T+++ L HA ++ S + + + + +++ Y+KC GC+ + RK+FDE+ D+V W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310
Query: 62 TALISGYS-QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ISGYS D + A+ F Q+ +G +P+ +L V+ A ++ + GRQVH
Sbjct: 311 NTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQ-GRQVHGLA 369
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK N + V ++L+ MY++ + DA LF + N VS+N++IAG+A+ G ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLV 237
L F ML F PT+ ++ SV A A TG +E GK ++ +++K + G + ++
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMI 488
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-N 295
D+ ++G + +AE++ + W+++L C HG + ++ ++L+ + P N
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQ--LDPLN 546
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
++ + S G L + LM+ GV+
Sbjct: 547 AAPYVMLANIYSDNGRLQDAASVRKLMRDRGVK 579
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 9/259 (3%)
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+D NV+ ++L+ YA+ ++ A LF + + VS+N LIA +AR+ + + A + F
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 185 EMLREGFEPTHFSYSSVFTALA-STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
EM + F+ S + TA + G + Q +HA + +G VGN L+ Y+K+
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQ---LHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 244 GSIEDAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G +++A ++F+ L + RD VSWNSM+ QH G + + +M G+ + T V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG--LLDRALKFIREMPIE 360
LTA ++ L G + A + K G +DL + G +LD K E+
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD-CRKVFDEIS-N 304
Query: 361 PTAAVWGALLGACRMHKNV 379
P +W ++ +++++
Sbjct: 305 PDLVLWNTMISGYSLYEDL 323
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/588 (38%), Positives = 351/588 (59%), Gaps = 38/588 (6%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++ +A+I+ I + ++ N ++ Y + +DEA LF+ MP ++ ++W +I+
Sbjct: 336 RIDDAKILFDQI----HEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIA 391
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY++N + E A++ + R G+ P+ +L+S A + + G+QVH+ +K G
Sbjct: 392 GYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFAC-SNIEALETGKQVHSLAVKAGCQ 450
Query: 127 WNVYVGSSLLDMYAR----------FDQM---------------------DDAWFLFTAL 155
+N YV ++L+ +Y + FD+M D+A +F +
Sbjct: 451 FNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM 510
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
S + VSW +I+ A+ +G +A+ F ML E P + + + G+ + G+
Sbjct: 511 PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQ 570
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
+H IK G V N LV MY K S D+ KVF+ + +RD+ +WN+++TG AQHG
Sbjct: 571 QIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHG 629
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHY 334
LG+ +R ++ M+ G+ PN+VTF+ +L ACSH+GL+DEG +F M +G+ P HY
Sbjct: 630 LGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHY 689
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
VDLLGRAG + A FI +MPIEP + +W ALLGAC++HKNVE+G AAE++F ++P
Sbjct: 690 ACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEP 749
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHP 454
++G +++L+NIY+S G ++ A+ RK+MKE GV K+P CSW++ KN +H FV D+ H
Sbjct: 750 SNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHE 809
Query: 455 QRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPG 514
Q I+ E+ +K GYVPD+ VL D++++E+ L HSEKLA+A+ L+ TP G
Sbjct: 810 QIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKG 869
Query: 515 STIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
I I KN+R+CGDCH+ KF S V +REI VRD NRFHHFR+G CSC
Sbjct: 870 MPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 170/347 (48%), Gaps = 21/347 (6%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK-CGCLDEARKLFDEMPVKDMVTWT 62
HL K +H + + F+ D+ + ILN Y K LD A K F+ M ++ TW+
Sbjct: 235 HLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWS 294
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK--FGRQVHAFC 120
+I+ SQ + ++A ++ R LK S + + G DD Q+H
Sbjct: 295 TIIAALSQAGRIDDAFAVYQ---RDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIH--- 348
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ NV ++++ Y + + +D+A LF + +N +SW +IAG+AR E+AL
Sbjct: 349 -----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQAL 403
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ + R+G P+ S +S F A ++ +LE GK VH+ +K+G Q ++V N L+ +Y
Sbjct: 404 VSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLY 463
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K SI ++F+R+ +D VS+NS ++ Q+ L F M +P+ V++
Sbjct: 464 GKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWT 519
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+++AC+ A D+G + + E E + LLG +G L
Sbjct: 520 TIISACAQA---DQGNEAVEIFRSMLHERELPNPPILTILLGLSGNL 563
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 42/380 (11%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D++ NT+L Y ++EAR LF+ MP ++ V+WT +ISGY +Q A +F ML
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR-FDQ 144
G+ P Q L SVL A +H K G++ +V VG+++L+ Y + +
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGIL-ESIHVLVHKTGFERDVVVGTAILNGYTKDVNM 274
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D A F + ++NE +W+ +IA ++ + A + R+ + S +S+ T
Sbjct: 275 LDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQ---RDPLKSVP-SRTSMLTG 330
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
LA G ++ K + + + +V++ N ++ Y ++ +++AE +FNR+ R+ +SW
Sbjct: 331 LARYGRIDDAKILFDQIHEP--NVVSW--NAMITGYMQNEMVDEAEDLFNRMPFRNTISW 386
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
M+ G A++G + + + + R G+ P+ + ACS+ L+ G+ +L K
Sbjct: 387 AGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVK 446
Query: 325 HGVE-------------------------------PEEAHYVTFVDLLGRAGLLDRALKF 353
G + + Y +F+ L + L D A
Sbjct: 447 AGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDV 506
Query: 354 IREMPIEPTAAVWGALLGAC 373
MP P W ++ AC
Sbjct: 507 FNNMP-SPDVVSWTTIISAC 525
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 170/365 (46%), Gaps = 42/365 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK----- 56
C++++ L+ + VH+ + + + + + N ++ Y K + R++FD M VK
Sbjct: 428 CSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSY 487
Query: 57 --------------------------DMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
D+V+WT +IS +Q DQ A+ +F ML
Sbjct: 488 NSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL 547
Query: 91 PNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
PN L+ +L SG GA + G+Q+H +K G D + V ++L+ MY + D+
Sbjct: 548 PNPPILTILLGLSGNLGAP--QLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSL 604
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F ++E ++ +WN +I G+A+ G +A+R + M+ G P ++ + A + +G
Sbjct: 605 KVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSG 664
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEK-VFNRLLKRDVVSWNS 266
+++G + G L + + +VD+ ++G ++ AE +++ ++ D V W++
Sbjct: 665 LVDEGHQFFKSMSSDYG-LTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSA 723
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+L C H + R EK+ I P N ++ + S G+ DE LMK+
Sbjct: 724 LLGACKIHKNVEIGRRAAEKLF--SIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKER 781
Query: 326 GVEPE 330
GV +
Sbjct: 782 GVNKD 786
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 41/373 (10%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
Q+ + + G L EAR++FD MP +D++ W ++I Y N P+ L + L
Sbjct: 36 QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNL 95
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG----------------- 132
+ LS + AG D R ++ WN V
Sbjct: 96 RTGTILLSGYAR---AGRVRDA-RRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDA 151
Query: 133 ---------SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+++L Y M++A LF + +N VSW +I+G+ + +A F
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
ML EG P + SV +A+ G + +H V K+G + VG +++ Y K
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKD 271
Query: 244 GSIED-AEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRNGIAPNQVTFLC 301
++ D A K F + R+ +W++++ +Q G + A + L++ P++ +
Sbjct: 272 VNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS--VPSRTS--- 326
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+LT + G +D+ + F + EP + + + ++D A MP
Sbjct: 327 MLTGLARYGRIDDAKILFDQIH----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRN 382
Query: 362 TAAVWGALLGACR 374
T + G + G R
Sbjct: 383 TISWAGMIAGYAR 395
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 124/310 (40%), Gaps = 46/310 (14%)
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
R ++ +A +F ++ ++ ++WN++I + + A R+ ++ + G T +
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPD-AGRSLADAISGGNLRTG---T 99
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
+ + A G + + V G N +V Y ++G I A K+F+ + R
Sbjct: 100 ILLSGYARAGRVRDAR----RVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR 155
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIA------------------------- 293
DV SWN+MLTG L + FE+M RNG++
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215
Query: 294 -----PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR-AGLL 347
P Q + VL+A H G + L+ K G E + ++ + +L
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP-HILLANI 406
D A+KF M W ++ A ++ A+A +++ DP S P +
Sbjct: 276 DSAVKFFEGMAAR-NEYTWSTIIAALSQAGRID-DAFA---VYQRDPLKSVPSRTSMLTG 330
Query: 407 YASAGRLNDA 416
A GR++DA
Sbjct: 331 LARYGRIDDA 340
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/569 (38%), Positives = 349/569 (61%), Gaps = 11/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ + +H ++ +++ + + N+++ Y KC + +R++FDEMP K+ V+W
Sbjct: 20 CSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I Q+D+ + LF QML G +P++ ++L A + ++ V+ +
Sbjct: 80 SAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACVRSHEE-ADDVYRVVV 135
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D++ V S+ M+AR +++ A LF + SK+ V+W I + + +AL
Sbjct: 136 ENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALG 195
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG---GQLVAFVGNTLVD 238
+M+ +G P + V A ++ S + VH +I +G QL+A V L+D
Sbjct: 196 LLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLA-VETALID 253
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y K GS+ A KVF+ + +R++++W++M++G HG G+ + F++M + + P+ +T
Sbjct: 254 LYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHIT 312
Query: 299 FLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ +L+ACSH+GL+ EG + + ++ + GV P HY VD+LGRAG LD A FI M
Sbjct: 313 FVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERM 372
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+ P AAVWGALLGACR+H NV+L A +F+LDPH++G +++L NIY G+ +A
Sbjct: 373 PVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEAD 432
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R +MK GVKK S +E KN ++ FVA D +HPQ +I+ + + ++I+Q GY P
Sbjct: 433 SIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTP 492
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D + VL D++ +E+ L +HSEKLA+ F L++ PGS I I+KN+RVCGDCH+A KF S
Sbjct: 493 DINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFIS 552
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KV REI+VRD +RFHHF++G CSC DYW
Sbjct: 553 KVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 24/303 (7%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
MLRLG++P+ FT ++KA +FG ++H +K+GY V++ +SL+ MY + D
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSC-LRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCD 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ + + +F + KN VSW+A+I + ++ F +ML EG P S ++
Sbjct: 60 KYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILN 116
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A+A S E+ V+ V+++G V + M+A+ G +E A K+F+ ++ +D+V+
Sbjct: 117 AMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT 176
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA----------GLLD 313
W + + + + + ++M+ GI P+ +T L V+ ACS G++
Sbjct: 177 WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIIT 236
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G Y L+ A +DL + G L A K M E W A++
Sbjct: 237 TGFFYNQLL---------AVETALIDLYVKCGSLTYARKVFDGMQ-ERNIITWSAMISGY 286
Query: 374 RMH 376
MH
Sbjct: 287 GMH 289
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/564 (41%), Positives = 340/564 (60%), Gaps = 17/564 (3%)
Query: 8 LKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
LKE+RI A L + D+ + ++ Y + G LDEAR+LFDEM V+++ TWT ++S
Sbjct: 156 LKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVS 215
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL--KYG 124
GY++N + + A LF M + N+ + +++L G T GR AF L
Sbjct: 216 GYAKNGRVDVARKLFEVMP----ERNEVSWTAML----MGYTQS--GRMKEAFELFEAMP 265
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
W V +L + +M A +F ++ ++E +WNA+I RK +AL F+
Sbjct: 266 VKWIVACNEMILQ-FGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFA 324
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M REG S SV + AS SL+ G+ VHA +++S +V + L+ MY K G
Sbjct: 325 RMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCG 384
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ A+ +FNR L +DVV WNSM+TG +QHGLG+ + F M +G+ P++VTF+ VL+
Sbjct: 385 DLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLS 444
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACS++G + EG F MK + VEP HY VDLLGRAG +D A++ + +MP+EP A
Sbjct: 445 ACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDA 504
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
VWGALLGACR H ++L A E++ +L+P ++GP++LL+++YA+ GR D RK +
Sbjct: 505 IVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI 564
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
V K P CSW+E + VHMF D +HP++ MI + ++S +++ GY PD S V
Sbjct: 565 NRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFV 623
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D++E+ L HSE+LA+A+ L+ P G I + KN+RVCGDCHSA K +KV R
Sbjct: 624 LHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGR 683
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EII+RD NRFHHF+DG CSC D+W
Sbjct: 684 EIILRDANRFHHFKDGSCSCKDFW 707
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 152/340 (44%), Gaps = 35/340 (10%)
Query: 30 QNTILNAYAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRL 87
+ ++ Y + G + ARK+FD P+ + + +W A++S Y ++ +P +A++LF QM
Sbjct: 22 NTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM--- 78
Query: 88 GLKPNQFTLSSVLKASG---AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
P + T+S SG G D R+V + NV +S++ Y +
Sbjct: 79 ---PQRNTVSFNGMISGYVKNGMVAD--ARKV----FDVMPERNVVSWTSMVRGYVQEGM 129
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+++A LF + +N VSW +I G ++S + A + F + E +++
Sbjct: 130 VEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGG 185
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
G L++ + + + F T+V YAK+G ++ A K+F + +R+ VSW
Sbjct: 186 YCQVGRLDEARELFDEMKVRN----VFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSW 241
Query: 265 NSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
+ML G Q G K FE M ++ +A N++ L AG + + F MK
Sbjct: 242 TAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGL-----AGEMHRARMMFEGMK 296
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
E +E + + + R GL AL M E A
Sbjct: 297 ----ERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVA 332
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 119/248 (47%), Gaps = 17/248 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VHA ++ S F D+ + + ++ Y KCG L A+ +F+ KD+V W
Sbjct: 345 CASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMW 404
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
++I+GYSQ+ E A+ +F M G++P++ T VL A S +G + F A
Sbjct: 405 NSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGF-EIFEAMK 463
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEG 176
Y + + + ++D+ R ++D+A L + + + + W AL+ H +
Sbjct: 464 CTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLA 523
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI--KSGGQLVAFVGN 234
E A+ +++ EP + + + + +T +G+W V+ K +++ F G
Sbjct: 524 EVAVEKLAKL-----EPKNAGPYVLLSHMYAT----KGRWRDVEVLRKKINRRVIKFPGC 574
Query: 235 TLVDMYAK 242
+ +++ K
Sbjct: 575 SWIEVEKK 582
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/565 (41%), Positives = 347/565 (61%), Gaps = 15/565 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVTWTALISGYSQND 72
+H + F + ++ N + Y+K G L EA +F M ++D V+W ++I Y Q+
Sbjct: 160 LHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHK 219
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-RQVHAFCLKYGYDWNVYV 131
+ A+ L+ +M+ G K + FTL+SVL A + D G RQ H +K G+ N +V
Sbjct: 220 EGAKALALYKEMIFKGFKIDMFTLASVLNA--LTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 132 GSSLLDMYARF---DQMDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKALRTFSEML 187
GS L+D Y++ D M D+ +F + S + V WN +I+G++ E E+A+++F +M
Sbjct: 278 GSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQ 337
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGS 245
R G P S+ V +A ++ S QGK +H IKS ++ V N L+ +Y KSG+
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRIS-VNNALISLYYKSGN 396
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ DA +VF+R+ + + VS+N M+ G AQHG G +R +++ML +GIAPN +TF+ +L+A
Sbjct: 397 LLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSA 456
Query: 306 CSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
C+H G +DEGQ YF MK+ +EPE HY +DLLGRAG L+ A +FI MP +P +
Sbjct: 457 CAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
W ALLGACR HKN+ L AA+ + + P + P+++LAN+YA AG+ + A RK M+
Sbjct: 517 AWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMR 576
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL- 483
++K+P CSW+E K H+FVA D +HP +++ E+ +K+K++GYV D +
Sbjct: 577 GKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMV 636
Query: 484 --SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
A + E E +L HSEKLA+AF L+ST G I + KN+R+CGDCH+A KF S V
Sbjct: 637 KEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAG 696
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD RFH F+DG CSCGDYW
Sbjct: 697 REIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 212/414 (51%), Gaps = 22/414 (5%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N I+ AYAK + AR+LFDE P D V++ LISGY+ + A++LF +M LG +
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS ++ A +Q+H F + G+D V ++ + Y++ + +A
Sbjct: 138 VDGFTLSGLIAAC---CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 151 LFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F ++ ++EVSWN++I + + EG KAL + EM+ +GF+ F+ +SV AL S
Sbjct: 195 VFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG---SIEDAEKVFNRLLKRDVVSWNS 266
L G+ H +IK+G + VG+ L+D Y+K G + D+EKVF +L D+V WN+
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNT 314
Query: 267 MLTGCAQHGL-GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
M++G + + + V+ F +M R G P+ +F+CV +ACS+ +G+ L K
Sbjct: 315 MISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKS 374
Query: 326 GVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ P V + L ++G L A + MP E A + ++ H +
Sbjct: 375 NI-PSNRISVNNALISLYYKSGNLLDARRVFDRMP-ELNAVSFNCMIKGYAQHGH----G 428
Query: 384 YAAERIFE--LDPHDSGPHILLANIY---ASAGRLNDAARARKMMKESGVKKEP 432
A R+++ LD + +I I A G++++ + MKE+ K EP
Sbjct: 429 TEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKET-FKIEP 481
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 345/563 (61%), Gaps = 6/563 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
LK++ I H G + N ++ I + + A +F + ++ TW +
Sbjct: 34 LKQIHAFSIRH----GVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTI 89
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY+++D P A + + QM+ ++P+ T +LKA + + + + G +H+ ++ G
Sbjct: 90 IRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAI-SKSLNVREGEAIHSVTIRNG 148
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ V+V +SLL +YA + A+ +F ++ ++ V+WN++I G A +AL F
Sbjct: 149 FESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFR 208
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
EM EG EP F+ S+ +A A G+LE G+ VH +++K G + V N+L+D+YAK G
Sbjct: 209 EMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCG 268
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+I +A++VF+ + +R+ VSW S++ G A +G G+ + F++M G+ P+++TF+ VL
Sbjct: 269 AIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLY 328
Query: 305 ACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH G+LDEG YF MK+ G+ P HY VDLL RAGL+ +A ++I+ MP++P A
Sbjct: 329 ACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 388
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W LLGAC +H ++ LG A + L+P SG ++LL+N+YAS R +D R+ M
Sbjct: 389 VIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSM 448
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+ GVKK P S VE N V+ F D +HPQ ++ +I+E +K GYVP +++VL
Sbjct: 449 LKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVL 508
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ +++E+E L HSEK+A+AF L++TPPG+ I + KN+RVC DCH A K +K+ +RE
Sbjct: 509 ADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDRE 568
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I++RD +RFHHFR G CSC DYW
Sbjct: 569 IVIRDRSRFHHFRGGSCSCKDYW 591
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/568 (39%), Positives = 342/568 (60%), Gaps = 9/568 (1%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K L A H++++ S ND N ++N Y + +D A+KLFDEMP +++V+WT+L+
Sbjct: 38 KDLTSATSTHSNVVKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDEMPHRNVVSWTSLM 97
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+GY QP A+ LF QM + PN+FT ++++ A A + + GR++HA G
Sbjct: 98 AGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILA-NLEIGRRIHALVEVSGL 156
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
N+ SSL+DMY + + +D+A +F ++ ++N VSW ++I +++ ++G AL+ F E
Sbjct: 157 GSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKE 216
Query: 186 MLREGFE-PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+ P HF S +A AS GSL GK H VI+ G + + + LVDMYAK G
Sbjct: 217 FNHSRLDKPNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYAKCG 276
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ + K+F R+ V+ + SM+ G A++GLG +++ F++M+ I PN +TF+ VL
Sbjct: 277 CVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITFVGVLH 336
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT- 362
ACSH+GL+D+G M K+GV P+ HY D+LGR G ++ A + + + +E
Sbjct: 337 ACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEGDG 396
Query: 363 -AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
A +WG LL A R++ V++ A+ R+ E + +G ++ L+N YA AG +A R
Sbjct: 397 YAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYALAGDWENAHNLRS 456
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVAND-DAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK +GV KEP SW+E K + ++F A D + Q I RE+ E++K GYV +
Sbjct: 457 EMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELEERMKGRGYVGGTK 516
Query: 481 HVLSYADQQE--REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
L + D +E +E + +HSEKLALAF LI+TP G TI I KN+R+C DCH AFK S
Sbjct: 517 G-LVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMKNLRMCRDCHGAFKLISD 575
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+VERE++VRD NRFHHF++G C+CGD+W
Sbjct: 576 IVERELVVRDVNRFHHFKNGLCTCGDFW 603
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 138/253 (54%), Gaps = 3/253 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HA + S +++ +++++ Y KC +DEAR +FD M +++V+W
Sbjct: 135 CSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSW 194
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T++I+ YSQN Q +A+ LF + L KPN F L S + A + + G+ H
Sbjct: 195 TSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLGSLGS-GKITHGVV 253
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G++ + + S+L+DMYA+ ++ + +F +++ + + + ++I G A+ G +L
Sbjct: 254 IRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSL 313
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM+ +P ++ V A + +G +++G + + + K G A + DM
Sbjct: 314 QLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADM 373
Query: 240 YAKSGSIEDAEKV 252
+ G IE+A ++
Sbjct: 374 LGRVGRIEEAYQL 386
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/597 (37%), Positives = 351/597 (58%), Gaps = 34/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L+ V+A I S + + M + +++ Y KC +D A++LFDE ++
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ S Y + A+ +F+ M+ G++P++ ++ S + +S + + +G+ H + L
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI-SSCSQLRNILWGKSCHGYVL 364
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
+ G++ + ++L+DMY + FD+M D AW
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTG 209
F + KN VSWN +I+G + S E+A+ F M +EG + S+ +A G
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L+ KW++ ++ K+G QL +G TLVDM+++ G E A +FN L RDV +W + +
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG-YFALMKKHGVE 328
A G + + F+ M+ G+ P+ V F+ LTACSH GL+ +G+ +++++K HGV
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
PE+ HY VDLLGRAGLL+ A++ I +MP+EP +W +LL ACR+ NVE+ AYAAE+
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I L P +G ++LL+N+YASAGR ND A+ R MKE G++K P S ++ + H F +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D++HP+ I E+S++ +G+VPD S+VL D++E+ L HSEKLA+A+ L
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
IS+ G+TI I KN+RVC DCHS KFASKV REII+RD NRFH+ R G CSCGD+
Sbjct: 785 ISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 192/377 (50%), Gaps = 34/377 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H I+ + D+ +QN++++ YA+CG LD ARK+FDEM +++V+WT++I GY++ D
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
++A+ LF +M+R + PN T+ V+ A A D + G +V+AF G + N +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISAC-AKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+L+DMY + + +D A LF + N NA+ + + R+ +AL F+ M+ G
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P S S ++ + ++ GK H +V+++G + + N L+DMY K + A ++
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM------------------------- 287
F+R+ + VV+WNS++ G ++G A FE M
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 288 -------LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ G+ + VT + + +AC H G LD + + ++K+G++ + T VD+
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 341 LGRAGLLDRALKFIREM 357
R G + A+ +
Sbjct: 515 FSRCGDPESAMSIFNSL 531
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 191/401 (47%), Gaps = 19/401 (4%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC---LDEARKLFDEM-PVKDMV 59
+ K + E ++ H + ND++ ++ + G L A+++F+
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT----LSSVLKASGAGATDDKFGRQ 115
+ +LI GY+ + AI+LF +M+ G+ P+++T LS+ K+ G G Q
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN-----GIQ 155
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+H +K GY +++V +SL+ YA ++D A +F + +N VSW ++I G+AR+
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 176 GEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ A+ F M+R E P + V +A A LE G+ V+A + SG ++ + +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LVDMY K +I+ A+++F+ ++ N+M + + GL + + F M+ +G+ P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
++++ L +++CS + G+ + ++G E + +D+ + D A +
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
M T W +++ + V+ AA FE P
Sbjct: 396 DRMS-NKTVVTWNSIVAGYVENGEVD----AAWETFETMPE 431
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 342/567 (60%), Gaps = 16/567 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + ++ +M N++ + YAK G LD A + F +P K+++TWT +IS +++++
Sbjct: 161 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 220
Query: 74 -PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E + LF ML G+ PN+FTL+SV+ G D G+QV AF K G + N+ V
Sbjct: 221 CVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGT-RLDLNLGKQVQAFSFKIGCETNLPVK 279
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-----------KSEGEKALR 181
+S + +Y R + D+A LF +E + ++WNA+I+G+A+ +S G +AL
Sbjct: 280 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALT 339
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ R +P F++SS+ + ++ +LEQG+ +HA IKSG V + LV+MY
Sbjct: 340 IFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYN 399
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+DA K F + R V+W SM++G +QHG + ++ FE+M G+ PN++TF+
Sbjct: 400 KCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVS 459
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACS+AGL++E + YF +MKK + +EP HY +D+ R G ++ A FI+ E
Sbjct: 460 LLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFE 519
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+W +L+ CR H N+EL YAA+++ EL P +ILL N+Y S R D AR R
Sbjct: 520 PNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVR 579
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ V SW+ K+ V+ F AND HPQ +++ + EK K IGY P +
Sbjct: 580 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQN 639
Query: 481 HVLSYADQQEREA--KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
LS ++ E+ A L+ HSE+LA+A L+ TPPG+T+ + KNI +C DCHS+ K S
Sbjct: 640 AELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSL 699
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ REIIVRD+ R H F+DG CSCGD+
Sbjct: 700 LENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 196/395 (49%), Gaps = 17/395 (4%)
Query: 45 EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG 104
+AR+LFD MP +++VTWTAL++GY+ N QP + +F +ML +G P+ +TL + L A
Sbjct: 91 DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150
Query: 105 AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWN 164
A + D G+QVH + +KYG + +G+SL +YA+ +D A F + KN ++W
Sbjct: 151 A-SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 209
Query: 165 ALIAGHARKSEG-EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+I+ A E E + F +ML +G P F+ +SV + + L GK V A K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ---------- 273
G + V N+ + +Y + G ++A ++F ++ +++WN+M++G AQ
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329
Query: 274 -HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
G + F + R+ + P+ TF +L+ CS L++G+ A K G +
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIF 390
V++ + G + A K EMP T W +++ H + + + R+
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 448
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
+ P++ + L + + AG + +A MMK+
Sbjct: 449 GVRPNEI-TFVSLLSACSYAGLVEEAEHYFDMMKK 482
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L++ +HA + S F +D+ + + ++N Y KCGC+ +A K F EMP + VTW
Sbjct: 363 CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTW 422
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVH 117
T++ISGYSQ+ QP+ AI LF +M G++PN+ T S+L A S AG ++ F
Sbjct: 423 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 482
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
+C++ D + G ++DM+ R +++DA+ F+ NE W++L+AG
Sbjct: 483 EYCIEPVVD---HYG-CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG 531
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/562 (40%), Positives = 334/562 (59%), Gaps = 12/562 (2%)
Query: 8 LKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
L+E R+ A L + D+ ++ Y + G LDEAR LFDEMP +++VTWTA++S
Sbjct: 159 LQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVS 218
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY++N + + A LF M + N+ + +++L + A +K
Sbjct: 219 GYARNGKVDVARKLFEVMP----ERNEVSWTAMLLGYTHSGRMREASSLFDAMPVK---- 270
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
V V + ++ + ++D A +F ++ ++ +W+A+I + RK +AL F M
Sbjct: 271 -PVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRM 329
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
REG S SV + S SL+ GK VHA +++S +V + L+ MY K G++
Sbjct: 330 QREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNL 389
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A++VFNR +DVV WNSM+TG +QHGLG+ + F M +G+ P+ VTF+ VL+AC
Sbjct: 390 VRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSAC 449
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
S++G + EG F MK K+ VEP HY VDLLGRA ++ A+K + +MP+EP A V
Sbjct: 450 SYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIV 509
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGACR H ++L A E++ +L+P ++GP++LL+N+YA GR D R+ +K
Sbjct: 510 WGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKA 569
Query: 426 SGVKKEPACSWVETKNAVHMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
V K P CSW+E + VHMF D HP++ +I K ++ +++ GY PD S VL
Sbjct: 570 RSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLH 629
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D++E+ L HSEKLA+A+ L+ P G I + KN+RVCGDCHSA K +KV REI
Sbjct: 630 DVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREI 689
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
I+RD NRFHHF+DG CSC DYW
Sbjct: 690 ILRDANRFHHFKDGHCSCKDYW 711
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 162/350 (46%), Gaps = 26/350 (7%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++ + K G L EAR++FD MP +++V+WT+++ GY +N A LF M
Sbjct: 90 NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM------ 143
Query: 91 PNQFTLSSVLKASG---AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
P++ +S + G G DD R++ + +V ++++ Y ++D+
Sbjct: 144 PHKNVVSWTVMLGGLLQEGRVDD--ARKLFDMMPEK----DVVAVTNMIGGYCEEGRLDE 197
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + +N V+W A+++G+AR + + A + F M E S++++
Sbjct: 198 ARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP----ERNEVSWTAMLLGYTH 253
Query: 208 TGSL-EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+G + E A +K V N ++ + +G ++ A +VF + +RD +W++
Sbjct: 254 SGRMREASSLFDAMPVKP-----VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSA 308
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M+ + G + F +M R G+A N + + VL+ C LD G+ A + +
Sbjct: 309 MIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSE 368
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + + + + G L RA + P++ +W +++ H
Sbjct: 369 FDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVVMWNSMITGYSQH 417
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 59/336 (17%)
Query: 37 YAKCGCLDEARKLFDEMPV--KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQF 94
YA+ G LD ARK+FDE P+ + + +W A+++ Y + QP A++LF +M P +
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM------PQRN 85
Query: 95 TLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
T+S WN L+ + + + +A +F
Sbjct: 86 TVS-----------------------------WN-----GLISGHIKNGMLSEARRVFDT 111
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ +N VSW +++ G+ R + +A R F M + S++ + L G ++
Sbjct: 112 MPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNV----VSWTVMLGGLLQEGRVDDA 167
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ + + + V V N ++ Y + G +++A +F+ + KR+VV+W +M++G A++
Sbjct: 168 RKLFDMMPEKD---VVAVTN-MIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARN 223
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
G + FE M N+V++ +L +H+G + E F M V
Sbjct: 224 GKVDVARKLFEVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMI 279
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ F G G +D+A + + M E W A++
Sbjct: 280 MGF----GLNGEVDKARRVFKGMK-ERDNGTWSAMI 310
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VHA ++ S F D+ + + ++ Y KCG L A+++F+ P+KD+V W
Sbjct: 348 CVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMW 407
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+GYSQ+ E A+ +F M G+ P+ T VL A +
Sbjct: 408 NSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKC 467
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
KY + + + L+D+ R DQ+++A L + + + + W AL+ H + E
Sbjct: 468 KYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAE 527
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
A+ +++ EP + + + + + +G+W V++
Sbjct: 528 VAVEKLAQL-----EPKNAGPYVLLSNMYAY----KGRWRDVEVLR 564
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/611 (38%), Positives = 331/611 (54%), Gaps = 70/611 (11%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D + +++L+AY + G +AR + D MP + +V W+ALI+ ++ + E A L +M
Sbjct: 54 DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113
Query: 86 RLGLKPNQFT---LSSVLKASG-------------------------------AGATDDK 111
G++PN T L S L SG D
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
G Q+H + +K G + V ++L+DMY + + D+ +F + S NAL+AG +
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233
Query: 172 RKSEGEKALRTFSE-----------------------------------MLREGFEPTHF 196
R ++ +ALR F E M EG EP
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ V A A+ +L G+ H ++ G +VG+ LVDMYAK G + DA +F +
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
R+VVSWN+M+ G A HG + VR F M + P+ VTF CVL ACS AG +EG+
Sbjct: 354 PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413
Query: 317 GYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
YF M+ KHG+ P HY V LLGRAG LD A I +MP EP +WG+LLG+CR+
Sbjct: 414 SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRV 473
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
H NV L AAE +F+L+P ++G ++LL+NIYAS + R R MMK G+KKE CS
Sbjct: 474 HGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCS 533
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W+E KN VHM +A D +HP A I +K + ++ +++++G+ P + +VL ++QE++ L
Sbjct: 534 WIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDIL 593
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
VHSEKLA+A LIST G+ + + KN+R+CGDCH A KF S REI VRDTNRFHHF
Sbjct: 594 SVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHF 653
Query: 556 RDGFCSCGDYW 566
+DG CSC DYW
Sbjct: 654 KDGKCSCADYW 664
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 46/303 (15%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD---------------- 57
+H +++ + + D + +++ Y KCG DE ++FDE D
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237
Query: 58 -------------------MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSS 98
+V+WT++++ QN + A+ LF +M G++PN T+
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPC 297
Query: 99 VLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK 158
VL A A GR H F L+ G+ ++YVGS+L+DMYA+ ++ DA +F A+ +
Sbjct: 298 VLPAF-ANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR 356
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK--- 215
N VSWNA+I G+A E E A+R F M +P +++ V A + G E+G+
Sbjct: 357 NVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYF 416
Query: 216 --WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCA 272
H H I + A +V + ++G ++DA + N++ + D W S+L C
Sbjct: 417 NEMQHKHGISPRMEHYA----CMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCR 472
Query: 273 QHG 275
HG
Sbjct: 473 VHG 475
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 123/327 (37%), Gaps = 71/327 (21%)
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G + +V SSLL Y RF DA + + + V W+ALIA HA + E A
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 184 SEMLREGFEPTHFSY-----------------------------------SSVFTALAST 208
M +G EP ++ S +A+
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN-------------- 254
G + G+ +H +V+K+G +L A V L+DMY K G ++ +VF+
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229
Query: 255 ---------------------RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
R ++ +VVSW S++ C Q+G V F +M GI
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
PN VT CVL A ++ L G+ + G + VD+ + G + A
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVE 380
MP + W A++G MH E
Sbjct: 350 FEAMPYRNVVS-WNAMIGGYAMHGEAE 375
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
++ L R H L F +DI + + +++ YAKCG + +AR +F+ MP +++V+W A
Sbjct: 304 NIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNA 363
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVHAF 119
+I GY+ + + ENA+ LF M KP+ T + VL A S AG T++ F H
Sbjct: 364 MIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQH-- 421
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIA 168
K+G + + ++ + R ++DDA+ + + + W +L+
Sbjct: 422 --KHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLG 469
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/565 (39%), Positives = 337/565 (59%), Gaps = 7/565 (1%)
Query: 5 LKKLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L LKE +H + L F N+ + N + +YAKCG L A ++F + K + +W A
Sbjct: 408 LPNLKE---LHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNA 464
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LI GYSQ+ P ++ + QM GL P+ FT+ S+L A + K G++VH ++
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC-SQIKSLKLGKEVHGLIIRN 523
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ + +V SLL +Y ++ A LF A+E K VSWN ++ G+ + E+AL F
Sbjct: 524 RLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLF 583
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M+ G +P S SVF A + SL G+ H + +K + AF+ +++DMYAK+
Sbjct: 584 RQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKN 643
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GS+ ++ KVFN L +R V SWN+M+ G HG K ++ FE+M R G P+++TFL VL
Sbjct: 644 GSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVL 703
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKF-IREMPIEP 361
TAC+H+GL+ EG Y MK G+ P HY +D+L RAG LD ALK EM EP
Sbjct: 704 TACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEP 763
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+W LL +CR+HKN+E+G A ++F +P ++LL+N+YA +G+ ++ + R+
Sbjct: 764 GVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQ 823
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MKE ++K+ CSW+E V FVA + + I W + +I ++GY PD+S
Sbjct: 824 RMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSS 883
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
V ++E+ +L+ HSEKLA+ + LI T G+T+ + KN+R+C DCH+A K SKV+E
Sbjct: 884 VQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVME 943
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD RFHHF++GFCSCGDYW
Sbjct: 944 REIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 175/376 (46%), Gaps = 11/376 (2%)
Query: 6 KKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
K ++ R +H + SA ND + ++ Y+ CG D++R +FD + K++ W A+
Sbjct: 95 KDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAV 154
Query: 65 ISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
IS YS+N+ N + +F +M+ GL P+ FT V+KA AG ++ + G VH +K
Sbjct: 155 ISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKAC-AGVSEVQVGLAVHGLVVKT 213
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+V+V ++L+ Y + DA +F + +N VSWN++I + E+
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLL 273
Query: 184 SEMLRE----GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+M+ + F P + ++V A + GK VH +K V N L+DM
Sbjct: 274 GQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDM 333
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQV 297
Y+K G I DA+ +F ++VVSWN+M+ G + G T +ML G + ++V
Sbjct: 334 YSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEV 393
Query: 298 TFLCVLTACSHAGLLDEGQGYFAL-MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T L + C +L + +K+ V E FV + G L A +
Sbjct: 394 TILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCS 453
Query: 357 MPIEPTAAVWGALLGA 372
+ T W AL+G
Sbjct: 454 IR-SKTVNSWNALIGG 468
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 192/393 (48%), Gaps = 9/393 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +++ + VH + + ++ + N +++ Y+KCGC+++A+ +F K++V+W
Sbjct: 299 CARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSW 358
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ G+S L QML G L+ ++ T+ + + + +++H +
Sbjct: 359 NTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL-KELHCY 417
Query: 120 CLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
LK + N V ++ + YA+ + A +F ++ SK SWNALI G+++ S+
Sbjct: 418 SLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRL 477
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+L + +M G P F+ S+ +A + SL+ GK VH +I++ + +FV +L+
Sbjct: 478 SLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLS 537
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+Y G + A +F+ + + +VSWN+M+ G Q+G + + F +M+ G+ P +++
Sbjct: 538 LYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEIS 597
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ V ACS L G+ K +E + +D+ + G + + K +
Sbjct: 598 MMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK 657
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
E + A W A++ +H A A ++FE
Sbjct: 658 -ERSVASWNAMVMGYGIHGR----AKEAIKLFE 685
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 142/627 (22%), Positives = 260/627 (41%), Gaps = 87/627 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +++ VH ++ + D+ + N +++ Y G + +A ++F MP +++V+W
Sbjct: 194 CAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSW 253
Query: 62 TALISGYSQNDQPENAIILFSQML----RLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++I +S N E +L QM+ + P+ TL++VL A + G+ VH
Sbjct: 254 NSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVC-ARDREIGVGKGVH 312
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K D V V ++L+DMY++ ++DA +F +KN VSWN ++ G + +
Sbjct: 313 GLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIH 372
Query: 178 KALRTFSEMLREG--FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS----GGQLVAF 231
K +ML G + + L K +H + +K +LVA
Sbjct: 373 KTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVA- 431
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
N V YAK GS+ A +VF + + V SWN+++ G +Q + ++ + +M +G
Sbjct: 432 --NAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSG 489
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL---- 347
+ P+ T +L+ACS L G+ L+ ++ +E + Y++ + L G L
Sbjct: 490 LLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAH 549
Query: 348 ---------------------------DRALKFIREMP---IEPTAAVWGALLGACRMHK 377
+RAL R+M ++P ++ GAC +
Sbjct: 550 VLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLP 609
Query: 378 NVELG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV----- 428
++ LG YA + + E + + I ++YA G + ++ + +KE V
Sbjct: 610 SLRLGREAHGYALKCLLEDNAFIACSVI---DMYAKNGSVMESFKVFNGLKERSVASWNA 666
Query: 429 ----------KKEPACSWVETKNAVH-----MFVANDDAHPQRAMIHKKWREISEKIKQI 473
KE + E + H F+ A ++H+ + +
Sbjct: 667 MVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLF 726
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPG--------STIHIKKNIRV 525
G P H D R KL E L +A +S PG S+ I KN+ +
Sbjct: 727 GMNPTLKHYACVIDMLVRAGKLD---EALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEM 783
Query: 526 CGDCHSAFKFASKVVEREIIVRDTNRF 552
G+ +A F S+ + E V +N +
Sbjct: 784 -GEKIAAKLFVSEPEKPENYVLLSNLY 809
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 11/283 (3%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYV-GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
D + GR++H + N V + ++ MY+ DD+ +F AL KN WNA+I
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 168 AGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
+ ++R L F +M+ E G P +F++ V A A ++ G VH V+K+
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
FV N LV Y +GS+ DA +VF + +R++VSWNSM+ + +GL + +
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 287 MLRN----GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
M+ P+ T VL C+ + G+G L K ++ E +D+
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLG----ACRMHKNVEL 381
+ G ++ A + I ++ W ++G A +HK +L
Sbjct: 336 KCGCINDA-QVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDL 377
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/485 (44%), Positives = 311/485 (64%), Gaps = 7/485 (1%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G+KPN FT S++L A + ++HA +K Y + VG++LLD Y +
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSP-----FEMHAQAIKRNYVKSPSVGTALLDAYVKRG 55
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+D+A +F +E K+ V+W+A+I G+A+ + E A+R F +M +E +P +++S +
Sbjct: 56 NVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIIN 115
Query: 204 ALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
A A+ T +EQGK +HA IKS V + L+ MY+K G IE A +VF R +RD+V
Sbjct: 116 ACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLV 175
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
SWNS+++G AQHG G+ + FE+M R + + VTF+ V++AC+H GL +EGQ YF +M
Sbjct: 176 SWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIM 235
Query: 323 -KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
K H +EP HY VDL GRAG+L +A++ I EMP +A VW LL A +H+N+E+
Sbjct: 236 VKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEV 295
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
G AA+++ L P + ++LL N+YAS G + A+ RK+M+E VKK SW+E KN
Sbjct: 296 GKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKN 355
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+ F+A D +HP I+ K E+S ++K GY PD+S+V D++ +EA L HSE+
Sbjct: 356 KTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSER 415
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+AF LI TPPG+ + I KN+RVCGDCHS K S + R+I+VRD+NRFHHF+ G CS
Sbjct: 416 LAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCS 475
Query: 562 CGDYW 566
CGDYW
Sbjct: 476 CGDYW 480
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 142/267 (53%), Gaps = 10/267 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + ++ +L+AY K G +DEA K+F + KD+V W+A+I GY+Q
Sbjct: 28 MHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGD 87
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ +F QM + +KPN++T S ++ A A + G+Q+HA+ +K ++ + V S
Sbjct: 88 TEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSS 147
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LL MY++ ++ A+ +F ++ VSWN++I+G+A+ G KAL F EM R+ E
Sbjct: 148 ALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEM 207
Query: 194 THFSYSSVFTALASTGSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
++ V +A TG +G+ V H I+ + + +VD+Y ++G +
Sbjct: 208 DGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYS----CMVDLYGRAGMLVK 263
Query: 249 AEKVFNRL-LKRDVVSWNSMLTGCAQH 274
A ++ N + W ++L H
Sbjct: 264 AMEIINEMPFPASANVWRTLLAASCIH 290
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+++ + +HA + S F N + + + +L Y+K G ++ A ++F +D+V+W ++ISG
Sbjct: 124 VEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISG 183
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q+ A+ +F +M R L+ + T V+ A ++ R + +
Sbjct: 184 YAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEP 243
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
+ S ++D+Y R A L A+E NE+ + A
Sbjct: 244 RMEHYSCMVDLYGR------AGMLVKAMEIINEMPFPA 275
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 350/572 (61%), Gaps = 8/572 (1%)
Query: 2 CTHLKKLKEARIVHAHIL-GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C +L+ L + R +HA +L + ++A+ N+++ Y KCG + A +F+ MP KD V+
Sbjct: 371 CANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVS 430
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+I+ N + ++A+ LF M GL+ N+FTL S+L+A G G D K RQ+HA
Sbjct: 431 WNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACG-GLEDLKLARQIHARA 489
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG--E 177
G+ N VG+S+++MYAR + DA F +LE K V+W+ ++A +A+ +G
Sbjct: 490 AAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGR 549
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV-GNTL 236
+A + F EM EG +P ++ S A A+ +LE G+ +H SG + V GNT+
Sbjct: 550 RAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTI 609
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++MY K GS DA+ VF+++ ++ ++SWNS++ A +G + ++ML G P+
Sbjct: 610 INMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDS 669
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
T + +L SHAGLL+ G +F + ++ HG+EP VDLL R G LD A + I
Sbjct: 670 GTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELIL 729
Query: 356 EMP-IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
P + W LL AC+ + + + G AER+FEL+P SG ++LAN+YAS GR +
Sbjct: 730 ASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWS 789
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
DA+R RKMM+ VKKEP CSW+E +VH F++ + HP+ I + +++ ++++ G
Sbjct: 790 DASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAG 849
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD+++V+ ++ ++E L HSE+LA+ F L+ST PG TI + KN+RVC DCH+A K
Sbjct: 850 YVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATK 909
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S VV REI+VRD++RFHHF+ G CSCGD+W
Sbjct: 910 IISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 216/422 (51%), Gaps = 5/422 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L R +H+ ++GS ++I + N+++N Y KC + A K+FD M ++D+V+W
Sbjct: 68 CAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSW 127
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++ Y+QN A+ S+M G+KPNQ T +++ D GR++H +
Sbjct: 128 TAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLD-LGRKIHHRII 186
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + + +G++L+ MY DD +F+ + + + W +IAG ++ + E+ L
Sbjct: 187 NEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLL 246
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M EG + +Y S+ + ++++G+ + A +++S + +L+ +Y
Sbjct: 247 VFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYG 306
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G ++ A+ + + +RDVV+WN+M+T CAQ+G + +M G N+VT+L
Sbjct: 307 QCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLS 366
Query: 302 VLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC++ L +G+ A + G ++ E A + + + G+ G + A+ MP +
Sbjct: 367 VLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRK 426
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+ W A++ A + + A EL+ S LL+ + A G L D AR
Sbjct: 427 DDVS-WNAVINASVGNSKFQ-DALELFHGMELEGLRSNEFTLLSLLEACGG-LEDLKLAR 483
Query: 421 KM 422
++
Sbjct: 484 QI 485
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 173/337 (51%), Gaps = 2/337 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y KC + +A +FD + K++ +WT +++ YSQN A+ LF++M G +P++
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
L A A D GRQ+H+ + G N+ + +SL++MY + + A +F +
Sbjct: 62 VIALDACAASGELDH-GRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
++ VSW A++A +A+ +AL S M EG +P ++ ++ A L+ G+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H +I G + +GN LV MY GS +D + VF+R+ + V+ W +M+ GC+Q+G
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ + F KM G+ N+VT++ ++ C + + EG+ A + + +
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ L G+ G+LDRA + M A W A++ AC
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVA-WNAMVTAC 336
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY + ++ DA +F + +KN SW ++A +++ +AL F+ M EG P
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ A A++G L+ G+ +H+ V+ SG + N+LV+MY K + AEKVF+ +L
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
RDVVSW +ML AQ+G + +M G+ PNQVTF+ ++ C+ LLD G+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
+ G+EP+ V + G G D M + + +W ++ C +
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIAGCSQNG 239
Query: 378 NVELG 382
E G
Sbjct: 240 QYEEG 244
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/543 (40%), Positives = 329/543 (60%), Gaps = 5/543 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D A N++++ Y + G +D+A KLF +MP K++++WT +I G QN++ A+ LF ML
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
R +K + V+ A A A G QVH +K G+ + YV +SL+ YA ++
Sbjct: 218 RCCIKSTSRPFTCVITAC-ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D+ +F + W AL++G++ + E AL FS MLR P +++S +
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++ G+L+ GK +H +K G + AFVGN+LV MY+ SG++ DA VF ++ K+ +VSWN
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
S++ GCAQHG GK F +M+R P+++TF +L+ACSH G L++G+ F M
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 325 -HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ ++ + HY VD+LGR G L A + I M ++P VW ALL ACRMH +V+ G
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
AA IF LD S ++LL+NIYASAGR ++ ++ R MK++G+ K+P SWV +
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK 576
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F + D H R I++K + EK+K++GY PD L + +++E L HSE+LA
Sbjct: 577 HEFFSGDQPHCSR--IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLA 634
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LI+T GS + + KN+RVC DCH+ K S VV REI++RD RFHHF++G CSCG
Sbjct: 635 IAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCG 694
Query: 564 DYW 566
DYW
Sbjct: 695 DYW 697
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 20/379 (5%)
Query: 2 CTHL--KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C HL +++ EAR V + +++ ++ Y + L +A LFDEMPV+D+V
Sbjct: 43 CNHLLSRRIDEAREVFNQVPSP----HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVV 98
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA--GATDDKFGRQVH 117
+W ++ISG + A+ LF +M P + +S +G D+ R +
Sbjct: 99 SWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K WN S++ Y +F ++DDA LF + KN +SW +I G +
Sbjct: 153 QMPVKDTAAWN-----SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F MLR + T ++ V TA A+ + G VH +IK G +V +L+
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI 267
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
YA I D+ KVF+ + V W ++L+G + + + + F MLRN I PNQ
Sbjct: 268 TFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
TF L +CS G LD G+ + K G+E + + V + +G ++ A+ ++
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI 387
Query: 358 PIEPTAAVWGALLGACRMH 376
+ + W +++ C H
Sbjct: 388 -FKKSIVSWNSIIVGCAQH 405
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 152/264 (57%), Gaps = 4/264 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH I+ F + + +++ YA C + ++RK+FDE + + WTAL+SGYS N +
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E+A+ +FS MLR + PNQ T +S L + A T D +G+++H +K G + + +VG+
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD-WGKEMHGVAVKLGLETDAFVGN 365
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ MY+ ++DA +F + K+ VSWN++I G A+ G+ A F +M+R EP
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEK 251
+++ + +A + G LE+G+ + ++ + + + +VD+ + G +++AE+
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 252 VFNRL-LKRDVVSWNSMLTGCAQH 274
+ R+ +K + + W ++L+ C H
Sbjct: 486 LIERMVVKPNEMVWLALLSACRMH 509
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L + +H + + D + N+++ Y+ G +++A +F ++ K +V+W
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G +Q+ + + A ++F QM+RL +P++ T + +L A +K GR++ + +
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK-GRKLFYY-M 453
Query: 122 KYG---YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKS 174
G D + + ++D+ R ++ +A L + K NE+ W AL++ H+
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 175 EGEKA 179
GEKA
Sbjct: 514 RGEKA 518
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 40/174 (22%)
Query: 217 VHAHVIKSGGQLVAFVG-NTLVDMYAKSGSIEDAEKVF---------------------N 254
+H +S V F L+ + S I++A +VF N
Sbjct: 21 IHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSN 80
Query: 255 RLLK----------RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
RL+ RDVVSWNSM++GC + G V+ F++M + V++ ++
Sbjct: 81 RLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVN 136
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
C +G +D+ + F M + A + + V + G +D ALK ++MP
Sbjct: 137 GCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/546 (42%), Positives = 325/546 (59%), Gaps = 3/546 (0%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
+D + L+ Y K GCL AR+LFDEMP +++V W A+++ + +P + +
Sbjct: 152 LPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYF 211
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+ G PN ++ + A AG T+ G Q + F K G+ +V V +S++D Y +
Sbjct: 212 GLRGAGGMPNVVSVCAFFNAC-AGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKC 270
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+ A +F + +N VSW +++ +A+ E+A + R G EPT F SSV
Sbjct: 271 RCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVL 330
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
T A L+ G+ +HA ++S FV + LVDMY K G IEDAE+VF + +R++V
Sbjct: 331 TTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLV 390
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
+WN+M+ G A G + F+KM+ APN +T + VLTACS GL EG F
Sbjct: 391 TWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQT 450
Query: 322 MK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
MK + G+EP HY VDLL RAG+ +RA K I+ MP+ P+ +VWGALLG C+MH E
Sbjct: 451 MKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTE 510
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
LG AAE++FELDP DSG H+LL+N+ ASAGR +A RK MK G+KK+P SW+ K
Sbjct: 511 LGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWK 570
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
N VH+F A D H I ++ +++ GY+PD+ + L +++E+E+++ HSE
Sbjct: 571 NVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSE 630
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
KLALAF LI PPG I I KN+R+C DCH AFKF S + REIIVRD N FHHF++ C
Sbjct: 631 KLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYEC 690
Query: 561 SCGDYW 566
SC DYW
Sbjct: 691 SCKDYW 696
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 2/341 (0%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++N Y+K A P +V++TA ISG +Q+ +P A+ F+ MLRLGL+PN
Sbjct: 59 LVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPN 118
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFL 151
FT S KA+ + G Q+HA L++GY + +V + LDMY + + A L
Sbjct: 119 DFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRL 178
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + ++N V+WNA++ + + + + G P S + F A A +L
Sbjct: 179 FDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNL 238
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
G+ + V K G V N++VD Y K + A VF+ + R+ VSW SM+
Sbjct: 239 SLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAY 298
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
AQ+G + + R G P VLT C+ LD G+ A+ + ++
Sbjct: 299 AQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNI 358
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
VD+ G+ G ++ A + EMP + W A++G
Sbjct: 359 FVASALVDMYGKCGGIEDAEQVFFEMP-QRNLVTWNAMIGG 398
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 16/283 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + + F D+++ N++++ Y KC C+ +AR +FD M V++ V+W
Sbjct: 232 CAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSW 291
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++ Y+QN E A ++ R G +P F +SSVL AG GR +HA +
Sbjct: 292 CSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTC-AGLLGLDLGRALHAVAV 350
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ D N++V S+L+DMY + ++DA +F + +N V+WNA+I G+A + AL
Sbjct: 351 RSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALS 410
Query: 182 TFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQG-------KWVHAHVIKSGGQLVAFVG 233
F +M+ + P + + +V TA + G ++G KW I+ + A V
Sbjct: 411 VFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFG--IEPRIEHYACV- 467
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHG 275
VD+ ++G E A K+ + R +S W ++L GC HG
Sbjct: 468 ---VDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHG 507
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 111 KFGRQVHAFCLKY-GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG 169
+ GR HA L+ ++ + L+++Y++ D A A S VS+ A I+G
Sbjct: 34 RLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISG 93
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVF-TALASTGSLEQGKWVHAHVIKSGGQL 228
A+ + +AL F+ MLR G P F++ S F A ++ G +HA ++ G
Sbjct: 94 AAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLP 153
Query: 229 -VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
AFV +DMY K+G + A ++F+ + R+VV+WN+++T G TV + +
Sbjct: 154 DDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGL 213
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
G PN V+ AC+ L G+ ++ + K G + + + VD G+ +
Sbjct: 214 RGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCV 273
Query: 348 DRA 350
+A
Sbjct: 274 GKA 276
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/601 (37%), Positives = 341/601 (56%), Gaps = 37/601 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK LK + +H + D+ + ++N YA C C+ EA+ +FD MP +++VTW
Sbjct: 353 CSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTW 412
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+L S Y P+ + +F +M+ G+KP+ T+ S+L A + D K G+ +H F +
Sbjct: 413 NSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHAC-SDLQDLKSGKVIHGFAV 471
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G +V+V ++LL +YA+ + +A +F + + SWN ++ + E EK L
Sbjct: 472 RHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLY 531
Query: 182 TFSEMLRE-----------------------------------GFEPTHFSYSSVFTALA 206
FS+M R+ GF+P + S+ A +
Sbjct: 532 MFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACS 591
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ L GK +H +V + N LVDMYAK G + + VF+ + +DV SWN+
Sbjct: 592 LSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNT 651
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKH 325
M+ HG GK + FEKML + + P+ TF CVL+ACSH+ L++EG Q + ++ + H
Sbjct: 652 MIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDH 711
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
VEPE HY VD+ RAG L+ A FI+ MP+EPTA W A L CR++KNVEL +
Sbjct: 712 LVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKIS 771
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A+++FE+DP+ S ++ L NI +A ++A++ RK+MKE G+ K P CSW N VH
Sbjct: 772 AKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHT 831
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
FVA D ++ + I+ E+ KIK GY PD+ +VL DQ+E+ L HSEKLA+A
Sbjct: 832 FVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVA 891
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F +++ STI + KN+R+CGDCH+A K+ S VV I+VRD+ RFHHF++G CSC D+
Sbjct: 892 FGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDF 951
Query: 566 W 566
W
Sbjct: 952 W 952
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 195/383 (50%), Gaps = 2/383 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ LK + +H ++ D+ + + +N YAKC C+ EA+ +FD MP +D+VTW
Sbjct: 151 CSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTW 210
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+L S Y P+ + +F +M+ G+KP+ T+S +L A + D K G+ +H F L
Sbjct: 211 NSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC-SDLQDLKSGKAIHGFAL 269
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+G NV+V ++L+++Y + +A +F + +N ++WN+L + + +K L
Sbjct: 270 KHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLN 329
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G +P + SS+ A + L+ GK +H +K G FV LV++YA
Sbjct: 330 VFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYA 389
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ +A+ VF+ + R+VV+WNS+ + G + + F +M+ NG+ P+ VT L
Sbjct: 390 NCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLS 449
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L ACS L G+ +HG+ + + L + + A +P
Sbjct: 450 ILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHRE 509
Query: 362 TAAVWGALLGACRMHKNVELGAY 384
A+ W +L A +K E G Y
Sbjct: 510 VAS-WNGILTAYFTNKEYEKGLY 531
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 176/345 (51%), Gaps = 2/345 (0%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
+D+++ N ++AY KC C++ AR++FD++ +D+VTW +L + Y P+ + +F +M
Sbjct: 73 SDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM 132
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
+K N T+SS+L + D K G+++H F +++G +V+V S+ ++ YA+
Sbjct: 133 GLNKVKANPLTVSSILPGC-SDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC 191
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+ +A +F + ++ V+WN+L + + +K L F EM+ +G +P + S + +A
Sbjct: 192 VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSA 251
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ L+ GK +H +K G FV N LV++Y + +A+ VF+ + R+V++W
Sbjct: 252 CSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITW 311
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
NS+ + G + + F +M NG+ P+ + +L ACS L G+ K
Sbjct: 312 NSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK 371
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
HG+ + V+L + A MP W +L
Sbjct: 372 HGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSL 415
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P AI +++ G+KP++ +V KA A K +Q H + G +V +G+
Sbjct: 21 PNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKV-KQFHDDATRCGVMSDVSIGN 79
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+ + Y + ++ A +F L +++ V+WN+L A + ++ L F +M +
Sbjct: 80 AFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ + L+ GK +H V++ G FV + V+ YAK + +A+ VF
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + RDVV+WNS+ + G + + F +M+ +G+ P+ VT C+L+ACS L
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLK 259
Query: 314 EGQGYFALMKKHGV 327
G+ KHG+
Sbjct: 260 SGKAIHGFALKHGM 273
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+A++ ++ G +P + +V A A++ + K H + G +GN
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ Y K +E A +VF+ L+ RDVV+WNS+ G + + F KM N + N
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+T +L CS L G+ + +HG+ + FV+ + + A
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 357 MPIEPTAAVWGAL 369
MP W +L
Sbjct: 202 MP-HRDVVTWNSL 213
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/572 (41%), Positives = 344/572 (60%), Gaps = 21/572 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-----LDEARKLFDEMPVKD 57
T L LK+A HA IL + D + +++ +YA + + ++FD + +
Sbjct: 66 TSLHHLKQA---HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 122
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
+ W +I +N++P AI+L+ +M+ +PN++T +VLKA S AG + G QV
Sbjct: 123 VFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAE--GVQV 180
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA +K+G + ++ SS + MYA F ++ +A + + EV + RK
Sbjct: 181 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD--DKGGEVD---AVCMPDRKGCF 235
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+AL F +M +E P F SV +A A+ G+L+QG+W+H + ++ QL +G +L
Sbjct: 236 MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSL 295
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDMYAK G I+ A +VF ++ ++V SWN+M+ G A HG + + F KM I PN+
Sbjct: 296 VDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNE 352
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+TF+ VL AC+H GL+ +G F M+K +GVEP+ HY VDLLGRAGLL A K +
Sbjct: 353 ITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVS 412
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+P EPT AVWGALLGACR H NVELG + + EL+P +SG + LL+NIYA AGR +
Sbjct: 413 SIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEE 472
Query: 416 AARARKMMKESGVKKEPACSWVET-KNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
RK+MKE G+K P S ++ + VH F+ D +HPQ I++ ++ E+++ G
Sbjct: 473 VGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEG 532
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
Y PD S VL D++E+E + HSEKLA+ F LI+T PG+TI I KN+RVC DCHSA K
Sbjct: 533 YEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATK 592
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S+V REIIVRD R+HHFR+G CSC D+W
Sbjct: 593 LISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 161/345 (46%), Gaps = 22/345 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C+ + E VHAH++ D + ++ + YA G L EAR++ D+ + D V
Sbjct: 168 CSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC 227
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
+ + A+ +F QM + ++P +F L SVL A + GA D GR +H +
Sbjct: 228 MPDRKGCFME------ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQ--GRWIHTY 279
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ + +G+SL+DMYA+ ++D AW +F + +K SWNA+I G A E A
Sbjct: 280 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDA 339
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVGNTL 236
+ FS+M P ++ V A A G +++G + + K G Q+ + +
Sbjct: 340 IDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHY--GCI 394
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
VD+ ++G + +AEKV + + + W ++L C +HG + R K+L N
Sbjct: 395 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER-VGKILLELEPQN 453
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ + + AG +E LMK+ G++ + +DL
Sbjct: 454 SGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPG--TSIIDL 496
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 43/265 (16%)
Query: 192 EPTHFSYSSVFTALAS--TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG----- 244
E + S+ ++ L + T SL K HA ++++G +++ +LV YA
Sbjct: 47 ETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYL 106
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S E + +VF+ + K +V WN M+ C ++ + + +M+ PN+ T+ VL
Sbjct: 107 SFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLK 166
Query: 305 ACSHAGLLDEGQGYFALMKKHG--------------------------VEPEEAHYVTFV 338
ACS AG++ EG A + KHG + ++ V V
Sbjct: 167 ACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 226
Query: 339 DLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG----AYAAERIFE 391
+ R G AL+ +M I P V ++L AC ++ G YA +
Sbjct: 227 CMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQ 286
Query: 392 LDPHDSGPHILLANIYASAGRLNDA 416
LD L ++YA GR++ A
Sbjct: 287 LDGVLGTS---LVDMYAKCGRIDLA 308
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/557 (40%), Positives = 334/557 (59%), Gaps = 6/557 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA++ ND N +LN+Y + + A LFDEM ++V+WT+L+SGY +P
Sbjct: 29 HANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNVVSWTSLMSGYVNMGRP 88
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
++A+ L+++M + PN FTL++V+ + A D K G+ VHA G N+ V SS
Sbjct: 89 QSALWLYTKMSESEVSPNGFTLATVINSCSILA-DLKTGKMVHAHVQILGLQGNLVVCSS 147
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-P 193
L+DMY + + +D A +F ++ +N VSW A+IAG+A+ +G +AL F E E P
Sbjct: 148 LVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEALEVFREFSSYMMERP 207
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
HF +SV A AS G L GK H VI+ G +L V + LVDMYAK GS +EKVF
Sbjct: 208 NHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVASALVDMYAKCGSFLYSEKVF 267
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
R+ V+ + SM+ G A++GLGK ++ FE+M + PN VTF+ +L ACSH+GL+D
Sbjct: 268 RRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKVMPNDVTFVGILHACSHSGLVD 327
Query: 314 EGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT--AAVWGALL 370
EG M +KHGV P+ HY VD+L R G LD A K + + + P A +WG LL
Sbjct: 328 EGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAKSIRVNPNEGALLWGTLL 387
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
+ R+H V++ A++ + E + +G ++ L+N Y AG +A R M+ GV K
Sbjct: 388 SSSRLHGRVDMAVEASKWLIEYNQQVAGAYVTLSNTYTLAGEWENAHSLRTEMELVGVHK 447
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH-VLSYADQQ 489
EP CSW+E K+++++F A D + + + RE+ ++ + G V S+ V +Q+
Sbjct: 448 EPGCSWIEIKDSIYVFYAGDLSCERGDEVISLLRELERRMMERGCVGGSTGLVFVDVEQE 507
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
+E + +HSE+LALAF LIS P G TI + KN+R+C DCH AFK SK+VER+ +VRD
Sbjct: 508 VKEKIVGLHSERLALAFGLISIPKGVTIRVMKNLRICSDCHEAFKLISKIVERDFVVRDV 567
Query: 550 NRFHHFRDGFCSCGDYW 566
NRFHHF+DG C+C D+W
Sbjct: 568 NRFHHFKDGSCTCKDFW 584
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 146/279 (52%), Gaps = 6/279 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L LK ++VHAH+ + ++ + +++++ Y KC +D AR +FD M +++V+W
Sbjct: 117 CSILADLKTGKMVHAHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSW 176
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
TA+I+GY+QN + A+ +F + + +PN F L+SV+ A A G+ H
Sbjct: 177 TAMIAGYAQNGKGYEALEVFREFSSYMMERPNHFMLASVINAC-ASLGRLVSGKVTHGAV 235
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ GY+ N V S+L+DMYA+ + +F + + + + + ++I G A+ G+ +L
Sbjct: 236 IRGGYELNDVVASALVDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSL 295
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDM 239
F EM P ++ + A + +G +++G + +++ K G +VDM
Sbjct: 296 NLFEEMTDRKVMPNDVTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDM 355
Query: 240 YAKSGSIEDAEKVFNRLL---KRDVVSWNSMLTGCAQHG 275
++ G +++A K+ + + W ++L+ HG
Sbjct: 356 LSRVGRLDEAYKLAKSIRVNPNEGALLWGTLLSSSRLHG 394
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D F HA K+G + + LL+ Y RF ++ A LF + N VSW +L++
Sbjct: 21 DFIFAISTHANLFKFGLLNDTITTNHLLNSYLRFRRIQYAHHLFDEMHEPNVVSWTSLMS 80
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
G+ + AL +++M P F+ ++V + + L+ GK VHAHV G Q
Sbjct: 81 GYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMVHAHVQILGLQG 140
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
V ++LVDMY K ++ A VF+ + R+VVSW +M+ G AQ+G G + F +
Sbjct: 141 NLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEALEVFREFS 200
Query: 289 RNGIA-PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+ PN V+ AC+ G L G+ + + G E + VD+ + G
Sbjct: 201 SYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVASALVDMYAKCGSF 260
Query: 348 ---DRALKFIREMPIEP-TAAVWGA 368
++ + IR + P T+ + GA
Sbjct: 261 LYSEKVFRRIRNPSVIPYTSMIVGA 285
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 342/567 (60%), Gaps = 16/567 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + ++ +M N++ + YAK G LD A + F +P K+++TWT +IS +++++
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260
Query: 74 -PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E + LF ML G+ PN+FTL+SV+ G D G+QV AF K G + N+ V
Sbjct: 261 CVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGT-RLDLNLGKQVQAFSFKIGCETNLPVK 319
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-----------KSEGEKALR 181
+S + +Y R + D+A LF +E + ++WNA+I+G+A+ +S G +AL
Sbjct: 320 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALT 379
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ R +P F++SS+ + ++ +LEQG+ +HA IKSG V + LV+MY
Sbjct: 380 IFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYN 439
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+DA K F + R V+W SM++G +QHG + ++ FE+M G+ PN++TF+
Sbjct: 440 KCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVS 499
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACS+AGL++E + YF +MKK + +EP HY +D+ R G ++ A FI+ E
Sbjct: 500 LLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFE 559
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+W +L+ CR H N+EL YAA+++ EL P +ILL N+Y S R D AR R
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVR 619
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ V SW+ K+ V+ F AND HPQ +++ + EK K IGY P +
Sbjct: 620 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQN 679
Query: 481 HVLSYADQQEREA--KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
LS ++ E+ A L+ HSE+LA+A L+ TPPG+T+ + KNI +C DCHS+ K S
Sbjct: 680 AELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSL 739
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ REIIVRD+ R H F+DG CSCGD+
Sbjct: 740 LENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 219/439 (49%), Gaps = 17/439 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + L AR VH H+ + D+ + +++NAY +CG +AR+LFD MP +++VT
Sbjct: 87 RCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVT 146
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTAL++GY+ N QP + +F +ML +G P+ +TL + L A A + D G+QVH +
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA-SCDVDLGKQVHGYA 205
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG-EKA 179
+KYG + +G+SL +YA+ +D A F + KN ++W +I+ A E E
Sbjct: 206 IKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELG 265
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F +ML +G P F+ +SV + + L GK V A K G + V N+ + +
Sbjct: 266 LSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYL 325
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----------HGLGKATVRWFEKML 288
Y + G ++A ++F ++ +++WN+M++G AQ G + F +
Sbjct: 326 YLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLK 385
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
R+ + P+ TF +L+ CS L++G+ A K G + V++ + G +
Sbjct: 386 RSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQ 445
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANI 406
A K EMP T W +++ H + + + R+ + P++ + L +
Sbjct: 446 DANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI-TFVSLLSA 503
Query: 407 YASAGRLNDAARARKMMKE 425
+ AG + +A MMK+
Sbjct: 504 CSYAGLVEEAEHYFDMMKK 522
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L++ +HA + S F +D+ + + ++N Y KCGC+ +A K F EMP + VTW
Sbjct: 403 CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTW 462
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVH 117
T++ISGYSQ+ QP+ AI LF +M G++PN+ T S+L A S AG ++ F
Sbjct: 463 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 522
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
+C++ D + G ++DM+ R +++DA+ F+ NE W++L+AG
Sbjct: 523 EYCIEPVVD---HYG-CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG 571
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 7/212 (3%)
Query: 177 EKALRTFS-----EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
E LRT ML EG Y + GSL + VH H+ K+G F
Sbjct: 55 EAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMF 114
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
V +LV+ Y + G+ DA ++F+ + +R+VV+W +++TG + + F +ML G
Sbjct: 115 VATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMG 174
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
P+ T L AC + +D G+ K+G E + + L + G LD AL
Sbjct: 175 RYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSAL 234
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKN-VELG 382
+ +P E W ++ AC + VELG
Sbjct: 235 RAFWRIP-EKNVITWTTMISACAEDEECVELG 265
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 334/556 (60%), Gaps = 5/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ S +D + + +++ Y K G ++A++LFDEMP +D+V+W +L+SG S
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220
Query: 74 PENAIILFSQM-LRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYV 131
+ F +M G +PN+ TL SV+ A GA D+ G+ +H +K G V
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE--GKSLHGVVVKLGMSGKAKV 278
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+SL++MY + +D A LF + ++ VSWN+++ H EK + F+ M R G
Sbjct: 279 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 338
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P + ++ A TG Q + +HA++ + G + L+++YAK G + +E
Sbjct: 339 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 398
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F + RD ++W +ML G A H G+ ++ F+ M++ G+ + VTF +L+ACSH+GL
Sbjct: 399 IFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 458
Query: 312 LDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++EG+ YF +M + + VEP HY VDLLGR+G L+ A + I+ MP+EP++ VWGALL
Sbjct: 459 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 518
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GACR++ NVELG AE++ LDP D +I+L+NIY++AG A++ R +MKE + +
Sbjct: 519 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTR 578
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CS++E N +H FV D HP+ IH K E+ KI + G P + VL D++
Sbjct: 579 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEV 638
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+ + HSEKLA+AF L+ T G + I KN+R+CGDCHS KFAS + +R II+RD+
Sbjct: 639 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 698
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF DG CSC DYW
Sbjct: 699 RFHHFADGLCSCRDYW 714
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 166/287 (57%), Gaps = 16/287 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E + +H ++ + N+++N Y K G LD A +LF+EMPV+ +V+W
Sbjct: 251 CAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 310
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ---VHA 118
+++ ++ N E + LF+ M R G+ P+Q T+ ++L+A TD GRQ +HA
Sbjct: 311 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA----CTDTGLGRQAESIHA 366
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ + G++ ++ + ++LL++YA+ +++ + +F ++ ++ ++W A++AG+A + G +
Sbjct: 367 YIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGRE 426
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK---WVHAHVIKSGGQLVAFVGNT 235
A++ F M++EG E H +++ + +A + +G +E+GK + + V + +L + +
Sbjct: 427 AIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SC 484
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGK 278
+VD+ +SG +EDA ++ + ++ W ++L C +G LGK
Sbjct: 485 MVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGK 531
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
S+ A++S S+ +HA VIKS F+G+ LV MY K G EDA+++F+ + R
Sbjct: 144 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR 203
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
D+VSWNS+++G + G A + F +M +G PN+VT L V++AC+ G LDEG+
Sbjct: 204 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSL 263
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ K G+ + + +++ G+ G LD A + EMP+ + W +++
Sbjct: 264 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMV 314
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 342/567 (60%), Gaps = 16/567 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + ++ +M N++ + YAK G LD A + F +P K+++TWT +IS +++++
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260
Query: 74 -PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E + LF ML G+ PN+FTL+SV+ G D G+QV AF K G + N+ V
Sbjct: 261 CVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGT-RLDLNLGKQVQAFSFKIGCETNLPVK 319
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-----------KSEGEKALR 181
+S + +Y R + D+A LF +E + ++WNA+I+G+A+ +S G +AL
Sbjct: 320 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALT 379
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ R +P F++SS+ + ++ +LEQG+ +HA IKSG V + LV+MY
Sbjct: 380 IFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYN 439
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I+DA K F + R V+W SM++G +QHG + ++ FE+M G+ PN++TF+
Sbjct: 440 KCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVS 499
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACS+AGL++E + YF +MKK + +EP HY +D+ R G ++ A FI+ E
Sbjct: 500 LLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFE 559
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+W +L+ CR H N+EL YAA+++ EL P +ILL N+Y S R D AR R
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVR 619
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ V SW+ K+ V+ F AND HPQ +++ + EK K IGY P +
Sbjct: 620 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQN 679
Query: 481 HVLSYADQQEREA--KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
LS ++ E+ A L+ HSE+LA+A L+ TPPG+T+ + KNI +C DCHS+ K S
Sbjct: 680 AELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSL 739
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ REIIVRD+ R H F+DG CSCGD+
Sbjct: 740 LENREIIVRDSKRLHKFKDGRCSCGDF 766
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 217/439 (49%), Gaps = 17/439 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L AR VH H+ + D+ + +++NAY +C +AR+LFD MP +++VT
Sbjct: 87 RCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVT 146
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTAL++GY+ N QP + +F +ML +G P+ +TL + L A A + D G+QVH +
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA-SCDVDLGKQVHGYA 205
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG-EKA 179
+KYG + +G+SL +YA+ +D A F + KN ++W +I+ A E E
Sbjct: 206 IKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELG 265
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F +ML +G P F+ +SV + + L GK V A K G + V N+ + +
Sbjct: 266 MSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYL 325
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----------HGLGKATVRWFEKML 288
Y + G ++A ++F ++ +++WN+M++G AQ G + F +
Sbjct: 326 YLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLK 385
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
R+ + P+ TF +L+ CS L++G+ A K G + V++ + G +
Sbjct: 386 RSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQ 445
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANI 406
A K EMP T W +++ H + + + R+ + P++ + L +
Sbjct: 446 DANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI-TFVSLLSA 503
Query: 407 YASAGRLNDAARARKMMKE 425
+ AG + +A MMK+
Sbjct: 504 CSYAGLVEEAEHYFDMMKK 522
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L++ +HA + S F +D+ + + ++N Y KCGC+ +A K F EMP + VTW
Sbjct: 403 CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTW 462
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVH 117
T++ISGYSQ+ QP+ AI LF +M G++PN+ T S+L A S AG ++ F
Sbjct: 463 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 522
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
+C++ D + G ++DM+ R +++DA+ F+ NE W++L+AG
Sbjct: 523 EYCIEPVVD---HYG-CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAG 571
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
ML EG Y + TGSL + VH H+ K+G FV +LV+ Y + +
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
DA ++F+ + +R+VV+W +++TG + + F +ML G P+ T L A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C + +D G+ K+G E + + L + G LD AL+ +P E
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVIT 247
Query: 366 WGALLGACRMHKN-VELG 382
W ++ AC + VELG
Sbjct: 248 WTTMISACAEDEECVELG 265
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 344/565 (60%), Gaps = 4/565 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
HL L + VHA+ + +D + NT+++ Y KC ++ + +FD M +KD ++WT
Sbjct: 378 HLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTT 437
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I+ Y+Q+ + A+ +F + + G+K + + S+L+A +G +Q+H + ++
Sbjct: 438 IITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEAC-SGLETILLAKQLHCYAIRN 496
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G ++ V + ++D+Y ++ + +F +E K+ V+W ++I +A +AL F
Sbjct: 497 GL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLF 555
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+EM +P + S+ A+ SL +GK VH +I+ + + ++LVDMY+
Sbjct: 556 AEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGC 615
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GS+ A KVFN + +D+V W +M+ HG GK + F++ML+ G+ P+ V+FL +L
Sbjct: 616 GSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALL 675
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH+ L++EG+ Y +M + +EP + HY VDLLGR+G + A +FI+ MP++P
Sbjct: 676 YACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPK 735
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+ VW +LLGACR+HKN EL AA R+ EL+P + G ++L++N++A G+ N+A R
Sbjct: 736 SVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRAR 795
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSH 481
+ E G++K+PACSW+E N VH F D++H I+ K EI+E++ K+ GY D+
Sbjct: 796 ISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRS 855
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL ++E+ L HSE+LA++F LI+T PG + I KN+RVCGDCH K SK+ +
Sbjct: 856 VLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFD 915
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+I+VRD NRFHHF G CSCGD+W
Sbjct: 916 RDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 190/376 (50%), Gaps = 6/376 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L +L R +HA +L S + +I N +L Y KCG +D A ++F E+ KD ++W
Sbjct: 276 CTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISW 334
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
+++S Y QN AI S+MLR G +P+ + S+ A G G + G++VHA+
Sbjct: 335 NSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLN--GKEVHAYA 392
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D + VG++L+DMY + ++ + +F + K+ +SW +I +A+ S +AL
Sbjct: 393 IKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEAL 452
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F E +EG + S+ A + ++ K +H + I++ G L V N ++D+Y
Sbjct: 453 EIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRN-GLLDLVVKNRIIDIY 511
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G + + K+F + ++D+V+W SM+ A GL + F +M + P+ V +
Sbjct: 512 GECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALV 571
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L A L +G+ + + EEA + VD+ G L ALK + +
Sbjct: 572 SILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK 631
Query: 361 PTAAVWGALLGACRMH 376
+W A++ A MH
Sbjct: 632 DM-VLWTAMINATGMH 646
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 233/503 (46%), Gaps = 59/503 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALISGYSQND 72
VH + + N ++ YAKCG LD A ++F+ M +D+ +W ++ISG QN
Sbjct: 186 VHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNG 245
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
A+ LF M R L N +T VL+ A + GR++HA LK G + N+
Sbjct: 246 MFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLN-LGRELHAALLKSGSEVNIQC- 303
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++LL MY + ++D A +F ++ K+ +SWN++++ + + +A+ SEMLR GF+
Sbjct: 304 NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQ 363
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P H S+ +A+ G L GK VHA+ IK VGNTL+DMY K IE + V
Sbjct: 364 PDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHV 423
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS----- 307
F+R+ +D +SW +++T AQ + F + + GI + + +L ACS
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI 483
Query: 308 -----------HAGLLDE-------------GQGYFALMKKHGVEPEE-AHYVTFVDLLG 342
GLLD G+ Y +L VE ++ + + ++
Sbjct: 484 LLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYA 543
Query: 343 RAGLLDRALKFIREMP---IEPTA----AVWGALLGACRMHKNVELGAYAAERIFELDPH 395
+GLL+ AL EM ++P + ++ GA+ G + K E+ + R F ++
Sbjct: 544 NSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEA 603
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
L ++Y+ G L+ A + + VK + W NA M H +
Sbjct: 604 IVSS---LVDMYSGCGSLSGALKVF-----NAVKCKDMVLWTAMINATGMH-----GHGK 650
Query: 456 RAMIHKKWREISEKIKQIGYVPD 478
+A+ ++ +++ Q G PD
Sbjct: 651 QAI------DLFKRMLQTGVTPD 667
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 181/362 (50%), Gaps = 10/362 (2%)
Query: 6 KKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
K + + VHAH + GS +D + +L Y KCG + +AR LFD M + + +W A
Sbjct: 72 KAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNA 131
Query: 64 LISGYSQNDQPENAIILFSQMLRL----GLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
LI Y + A+ ++ M RL G+ P+ TL+SVLKASG D + G +VH
Sbjct: 132 LIGAYLSSGSACEALGVYRAM-RLSAASGVAPDGCTLASVLKASGVEG-DGRCGCEVHGL 189
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAGHARKSEGEK 178
+K+G D + +V ++L+ MYA+ +D A +F + +V SWN++I+G + +
Sbjct: 190 AVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQ 249
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F M R ++ V L G+ +HA ++KSG + V N L+
Sbjct: 250 ALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSE-VNIQCNALLV 308
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K G ++ A +VF + ++D +SWNSML+ Q+GL + + +MLR G P+
Sbjct: 309 MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHAC 368
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ + +A H G L G+ A K ++ + T +D+ + ++ + M
Sbjct: 369 IVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMR 428
Query: 359 IE 360
I+
Sbjct: 429 IK 430
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 10/203 (4%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV--AFVGNT 235
+ALR + G P Y V +A+ ++ QG VHAH + +G F+
Sbjct: 42 QALRLLTSQ-TPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATK 100
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML-----TGCAQHGLGKATVRWFEKMLRN 290
L+ MY K G + DA +F+ + R V SWN+++ +G A LG R +
Sbjct: 101 LLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG--VYRAMRLSAAS 158
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G+AP+ T VL A G G L KHG++ + + + G+LD A
Sbjct: 159 GVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSA 218
Query: 351 LKFIREMPIEPTAAVWGALLGAC 373
++ M A W +++ C
Sbjct: 219 MRVFELMHDGRDVASWNSMISGC 241
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/595 (39%), Positives = 359/595 (60%), Gaps = 39/595 (6%)
Query: 9 KEARIVHAHILGSAFK-NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++ R VHAH++ + N +A+ N ++N YAK G + +A +F+ M KD V+W +LISG
Sbjct: 321 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISG 380
Query: 68 YSQNDQPENAIILFS--------------------------------QMLRLGLKPNQFT 95
QN+ E+A +FS QM+R G ++ T
Sbjct: 381 LDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVT 440
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
++L A + + + Q+HA LKY + +G++LL Y + +M++ +F +
Sbjct: 441 FINILSAVSSLSLHE-VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 499
Query: 156 -ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
E+++EVSWN++I+G+ KA+ M+++G F+++++ +A AS +LE+G
Sbjct: 500 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG 559
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
VHA I++ + VG+ LVDMY+K G I+ A + F + R+V SWNSM++G A+H
Sbjct: 560 MEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARH 619
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAH 333
G G+ ++ F +M+ +G P+ VTF+ VL+ACSH G ++EG +F M + + + P H
Sbjct: 620 GHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEH 679
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC-RMH-KNVELGAYAAERIFE 391
+ VDLLGRAG LD FI MP++P +W +LGAC R + +N ELG AAE + E
Sbjct: 680 FSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE 739
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
L+P ++ ++LLAN+YAS + D A+AR MKE+ VKKE CSWV K+ VH+FVA D
Sbjct: 740 LEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDK 799
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
HP++ +I+ K RE++ K++ GY+P + + L + + +E L HSEK+A+AF L +
Sbjct: 800 LHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVL-TR 858
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+RVCGDCHSAF + SK+V R+I++RD+NRFHHF DG CSCGDYW
Sbjct: 859 QSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 214/430 (49%), Gaps = 51/430 (11%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
+EAR +H + F ++ + NT++N Y + G L A+KLFDEM +++VTW LISGY
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDW 127
+QN +P+ A F M+R G PN + S L+A +G + K G Q+H K Y
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 235
Query: 128 NVYVGSSLLDMYAR-FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V V + L+ MY D +DA +F + +N +SWN++I+ ++R+ + A FS M
Sbjct: 236 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 295
Query: 187 LREG----FEPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDM 239
+EG F+P FS SV +G+ VHAHVI++G VA +GN LV+M
Sbjct: 296 QKEGLGFSFKPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGLNDNKVA-IGNGLVNM 349
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK--------------------- 278
YAKSG+I DA VF ++++D VSWNS+++G Q+ +
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409
Query: 279 -----------ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
V++F +M+R G ++VTF+ +L+A S L + AL+ K+ +
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC----RMHKNVELGA 383
+ A + G+ G ++ K M W +++ +HK ++L
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529
Query: 384 YAAERIFELD 393
+ ++ LD
Sbjct: 530 FMMQKGQRLD 539
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 25/301 (8%)
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
G+ + R++H +KYG+ N+++ ++L+++Y R + A LF + ++N V+W
Sbjct: 111 GSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWAC 170
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG--SLEQGKWVHAHVIK 223
LI+G+ + + ++A F +M+R GF P H+++ S A +G + G +H + K
Sbjct: 171 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 230
Query: 224 SGGQLVAFVGNTLVDMYAKS-GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+ V N L+ MY S DA VF+ + R+ +SWNS+++ ++ G +
Sbjct: 231 TRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYD 290
Query: 283 WFEKMLRNGIA----PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV-----EPEEAH 333
F M + G+ PN A S +L+EG+ + H + + + A
Sbjct: 291 LFSSMQKEGLGFSFKPND--------AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAI 342
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
V++ ++G + A + E+ +E + W +L+ ++ E A +F L
Sbjct: 343 GNGLVNMYAKSGAIADACS-VFELMVEKDSVSWNSLISGLDQNECSE----DAAEMFSLM 397
Query: 394 P 394
P
Sbjct: 398 P 398
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ VHA + + ++D+ + + +++ Y+KCG +D A + F+ MP++++ +W
Sbjct: 550 CASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSW 609
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
++ISGY+++ E A+ LF++M+ G P+ T VL A S G ++ F +
Sbjct: 610 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGF-EHFKSMS 668
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKA 179
Y V S ++D+ R ++D+ ++ K N + W ++ R +
Sbjct: 669 EVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTE 728
Query: 180 L-RTFSEMLREGFEPTH 195
L R +EML E EP +
Sbjct: 729 LGRRAAEMLLE-LEPQN 744
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 194 THFSYSSVFTALAS--TGSL--EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
T FS S F +L + GS E+ + +H IK G F+ NTL+++Y + G + A
Sbjct: 94 TLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSA 153
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+K+F+ + R++V+W +++G Q+G F M+R G PN F L AC +
Sbjct: 154 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 213
Query: 310 G 310
G
Sbjct: 214 G 214
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 342/555 (61%), Gaps = 4/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHA+ + +++ + N++++ Y KC C+ F+ MP KD+++WT +I+GY+QN+
Sbjct: 374 VHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNEC 433
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A+ L ++ + + + S+L A +G +K +++H + LK G ++ + +
Sbjct: 434 HLDALNLLRKVQLEKMDVDPMMIGSILLAC-SGLKSEKLIKEIHGYVLKGGLA-DILIQN 491
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+++++Y +D A +F ++ SK+ VSW ++I +AL F+ ++ EP
Sbjct: 492 AIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEP 551
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SV A A+ SL++GK +H +I+ G L + N+LVDMYA+ G++E+A +F
Sbjct: 552 DLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIF 611
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +RD++ W SM+ HG GK + F KM + P+ +TFL +L ACSH+GL+
Sbjct: 612 NYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVV 671
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ +F +MK ++ +EP HY VDLL R+ L+ A F+R MPIEP+A VW ALLGA
Sbjct: 672 EGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGA 731
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H N +LG AA+++ +L+ +SG ++L++N +A+ GR ND R +MK + +KK+P
Sbjct: 732 CRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKP 791
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI-GYVPDSSHVLSYADQQER 491
CSW+E +N +H F+A D +HPQ I+ K + ++ +K+ GY + V ++E+
Sbjct: 792 GCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEK 851
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L HSE+LAL + L+ T G+ + I KN+R+C DCH+ FK AS++ +R ++VRD +R
Sbjct: 852 TQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASR 911
Query: 552 FHHFRDGFCSCGDYW 566
FHHF G CSCGD+W
Sbjct: 912 FHHFERGLCSCGDFW 926
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 211/427 (49%), Gaps = 11/427 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C K L + + +HAH L + + + + + ++ Y KCG +A K+FD+M + + T
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFT 115
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W A+I + AI L+ +M LG+ + FT VLKA GA + + G ++H
Sbjct: 116 WNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGA-FKERRLGCEIHGVA 174
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA--LESKNEVSWNALIAGHARKSEGEK 178
+K GY V+V ++L+ MYA+ + A LF + +E + VSWN++I+ H + E +
Sbjct: 175 VKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLE 234
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F M G E +++ S A ++ G+ +HA ++KS +V N L+
Sbjct: 235 ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIA 294
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYA G +EDAE+VF +L +D VSWN++L+G Q+ + + F+ M +G P+QV+
Sbjct: 295 MYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVS 354
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L ++ A + L G A KHG++ + +D+ G+ + MP
Sbjct: 355 VLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
E W ++ A L A R +L+ D P ++ + + A +G +
Sbjct: 415 -EKDLISWTTII-AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSG-----LK 467
Query: 419 ARKMMKE 425
+ K++KE
Sbjct: 468 SEKLIKE 474
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMYAKSGSIEDAEK 251
P +YS AS +L QG+ +HAH +K+ L F+ V MY K GS DA K
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
VF+++ +R + +WN+M+ C G + +++M G++ + TF CVL AC
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L LK+ + +H ++ F + + N++++ YA+CG ++ AR +F+ + +D++ WT++
Sbjct: 566 LSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSM 625
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKY 123
I+ + ++AI LFS+M + P+ T ++L A S +G + G+Q H +K
Sbjct: 626 INANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVE--GKQ-HFEIMKN 682
Query: 124 GYDWNVYVG--SSLLDMYARFDQMDDAWFLF--TALESKNEVSWNALIAG---HARKSEG 176
Y + + L+D+ AR + +++A+ +E EV W AL+ H+ G
Sbjct: 683 EYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEV-WCALLGACRIHSNNDLG 741
Query: 177 EKALRTFSEMLRE 189
E A + ++ E
Sbjct: 742 EVAAKKLLQLNTE 754
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/595 (38%), Positives = 351/595 (58%), Gaps = 33/595 (5%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+ L++L+ R +H + L G +N + +++ Y C + R +FD + + +
Sbjct: 544 CSQLERLRIGREIHCYALRNGDLIENSF-VGTALVDMYCNCKQPKKGRLVFDGVVRRTVA 602
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKAS-GAGATDDKFGRQVH 117
W AL++GY++N+ + A+ LF +M+ PN T +SVL A DK G +H
Sbjct: 603 VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG--IH 660
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG-------- 169
+ +K G+ + YV ++L+DMY+R +++ + +F + ++ VSWN +I G
Sbjct: 661 GYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYD 720
Query: 170 -------HARKSEGEKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHA 219
++ +GE TF + +G F+P + +V A+ +L +GK +HA
Sbjct: 721 DALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHA 780
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
+ +K + VG+ LVDMYAK G + A +VF+++ R+V++WN ++ HG G+
Sbjct: 781 YAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEE 840
Query: 280 TVRWFEKMLRNG------IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEA 332
+ F M G I PN+VT++ + ACSH+G++DEG F MK HGVEP
Sbjct: 841 ALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGD 900
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAA-VWGALLGACRMHKNVELGAYAAERIFE 391
HY VDLLGR+G + A + I MP W +LLGACR+H++VE G AA+ +F
Sbjct: 901 HYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFV 960
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
L+P+ + ++L++NIY+SAG + A RK MKE GV+KEP CSW+E + VH F++ D
Sbjct: 961 LEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDA 1020
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
+HPQ +H+ +S+++++ GYVPD S VL D +E+E L HSE+LA+AF L++T
Sbjct: 1021 SHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNT 1080
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
PPG+TI + KN+RVC DCH A K SK+V+REII+RD RFHHF +G CSCGDYW
Sbjct: 1081 PPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 187/364 (51%), Gaps = 6/364 (1%)
Query: 14 VHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
+HAH+ G A + +A+ N+++N Y KCG L AR++FD++P +D V+W ++I+ +
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
++ E ++ LF ML + P FTL SV A + G+QVHA+ L+ G D Y
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYT 470
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
++L+ MYAR +++DA LF + K+ VSWN +I+ ++ E+AL M+ +G
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKSGSIEDAE 250
P + +SV A + L G+ +H + +++G + +FVG LVDMY +
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHA 309
VF+ +++R V WN++L G A++ +R F +M+ PN TF VL AC
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
+ + +G + K G ++ +D+ R G ++ + M + W +
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVS-WNTM 709
Query: 370 LGAC 373
+ C
Sbjct: 710 ITGC 713
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 160/316 (50%), Gaps = 7/316 (2%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+ + + +AI ++ ML P+ F +VLKA+ A D G+Q+HA
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAA-VHDLCLGKQIHAHV 356
Query: 121 LKYGY--DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K+G+ +V V +SL++MY + + A +F + ++ VSWN++IA R E E
Sbjct: 357 FKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWEL 416
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALAST-GSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+L F ML E +PT F+ SV A + G + GK VHA+ +++ G L + N LV
Sbjct: 417 SLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRN-GDLRTYTNNALV 475
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MYA+ G + DA+ +F +D+VSWN++++ +Q+ + + + M+ +G+ P+ V
Sbjct: 476 TMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGV 535
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIRE 356
T VL ACS L G+ ++G E + T VD+ + + + +
Sbjct: 536 TLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG-RLVFD 594
Query: 357 MPIEPTAAVWGALLGA 372
+ T AVW ALL
Sbjct: 595 GVVRRTVAVWNALLAG 610
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+E ++ W L+ S A+ T++ ML P +F++ +V A A+ L G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 215 KWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
K +HAHV K G V N+LV+MY K G + A +VF+ + RD VSWNSM+
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
+ + ++ F ML + P T + V ACSH
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH 445
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/598 (39%), Positives = 342/598 (57%), Gaps = 40/598 (6%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+K + HA I+ + + + ++ YA G LD A +FD + + + ++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 68 YSQNDQPENAIIL---FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
Y+++ +++M LGL + FTL VLK S A + GR VH L+ G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLK-SCADLSRVCMGRCVHGQGLRVG 211
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE--------- 175
+ + YVG+SL+DMY + + DA LF + ++ SWNALIAG+ ++ E
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFE 271
Query: 176 ----------------------GEKALRTFSEMLREGFE--PTHFSYSSVFTALASTGSL 211
E+AL F EML++G E P + SV A A + +L
Sbjct: 272 RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAAL 331
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLT 269
E+G+ +H G L + V L MYAK S+ +A F+ + + +++++WN+M+T
Sbjct: 332 ERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMIT 391
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
A HG G V FE MLR G+ P+ VTF+ +L+ CSH+GL+D G +F M H VE
Sbjct: 392 AYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVE 451
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P HY VDLLGRAG L A + I +MP++ +VWGALL ACR H+N+E+ AA R
Sbjct: 452 PRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARR 511
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+F L+P +SG ++LL+N+YA AG + + R ++K G+KK P CSW+E H+F+
Sbjct: 512 LFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMG 571
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HPQ I+K + EKIK GY+PD+S VL ++E+E L HSEKLA+AF L
Sbjct: 572 ADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGL 631
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++T PG + + KN+R+CGDCH+A KF SK+ EREIIVRD NRFH F+DG CSCGDYW
Sbjct: 632 LNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 46/314 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ R VH L + D + ++++ Y KCG + +ARKLFD+M V+DM +W
Sbjct: 191 CADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASW 250
Query: 62 TAL-------------------------------ISGYSQNDQPENAIILFSQMLRLG-- 88
AL ISGY+QN E A+ LF +ML+ G
Sbjct: 251 NALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE 310
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+KPN T+ SVL A A ++ GR++H F G N V ++L MYA+ + +A
Sbjct: 311 MKPNWVTIVSVLPACAQSAALER-GRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEA 369
Query: 149 --WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
F A KN ++WN +I +A G +A+ F MLR G +P ++ + + +
Sbjct: 370 RCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCS 429
Query: 207 STGSLEQG-----KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRD 260
+G ++ G H ++ + A V VD+ ++G + +A+++ +++ ++
Sbjct: 430 HSGLIDAGLNHFNDMGTIHSVEPRVEHYACV----VDLLGRAGRLVEAKELISQMPMQAG 485
Query: 261 VVSWNSMLTGCAQH 274
W ++L C H
Sbjct: 486 PSVWGALLAACRSH 499
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 9/219 (4%)
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR + + + F P SY+ +F L ++ G+ HA ++ G Q AF+ +V M
Sbjct: 63 LRILLQPILQHF-PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAM 121
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN---GIAPNQ 296
YA SG ++ A VF+R+ + +NS++ +HG E R G+ +
Sbjct: 122 YASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDN 181
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T VL +C+ + G+ + G+E + + +D+ + G++ A K +
Sbjct: 182 FTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDK 241
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
M + A+ W AL+ K E+G AE +FE H
Sbjct: 242 MIVRDMAS-WNALIAG--YMKEGEIG--VAEDLFERMEH 275
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/616 (36%), Positives = 350/616 (56%), Gaps = 55/616 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDMV 59
C + LK+ +H+ + + + +QN IL+ + G + AR+LFD +P +
Sbjct: 24 CKSMYHLKQ---IHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVF 80
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W + GYS+ P+ + L+ +ML +KP+ +T + K + + GR++H
Sbjct: 81 SWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGF-TRSVALQLGRELHCH 139
Query: 120 CLKYGYDWNVYVGSSLLDMYAR----------FD-------------------------- 143
+KYG D NV+ ++L++MY+ FD
Sbjct: 140 VVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVIS 199
Query: 144 ------------QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
Q+D A F + ++ VSW A+I G+ R + ++AL F EM
Sbjct: 200 WTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKI 259
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P F+ SV TA A G+LE G+W+ ++ K+ + FVGN L+DMY K G++E A
Sbjct: 260 KPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALS 319
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+FN L +RD +W +M+ G A +G G+ + F +ML+ + P++VT++ VL+AC+H G+
Sbjct: 320 IFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGM 379
Query: 312 LDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+DEG+ +FA M +HG+EP AHY VDLLG+AG L A + I+ MP++P + VWGALL
Sbjct: 380 VDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALL 439
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GACR+HK+ E+ A E+I EL+P++ ++L NIYA+ + + R++M + G+KK
Sbjct: 440 GACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKK 499
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
P CS +E VH FVA D +HPQ I+ K +++ +K GY P++S V +++
Sbjct: 500 TPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEED 559
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E + HSEKLA+AF LI++ PG TI I KN+R+C DCH K SKV +RE+IVRD
Sbjct: 560 KENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRT 619
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHFR G CSC DYW
Sbjct: 620 RFHHFRHGSCSCKDYW 635
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 328/588 (55%), Gaps = 34/588 (5%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
AR VHAH++ + + ++++ AY G AR L E V W ALISG+++
Sbjct: 42 ARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNR 99
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH------------- 117
+ + F M R G P T SVL A G G D G QVH
Sbjct: 100 GGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLR 159
Query: 118 ---------AFCLKYGYDWNVYVG---------SSLLDMYARFDQMDDAWFLFTALESKN 159
A C G W V+ G +SLL AR Q+D+A LF + ++
Sbjct: 160 VENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERD 219
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
VSW A+I G+ + +AL F EM F+ SV TA A G+LE G+WV
Sbjct: 220 TVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRV 279
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
++ + G ++ AFVGN L+DMY+K GSIE A VF + RD +W +++ G A +G +
Sbjct: 280 YMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEE 339
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFV 338
+ F +M+R P++VTF+ VLTAC+HAGL+D+G+ +F ++++ + + P HY +
Sbjct: 340 AIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCII 399
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
DLLGRAG + AL I +MP+ P + +WG LL ACR+H N E+G AER+ ELDP +S
Sbjct: 400 DLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSM 459
Query: 399 PHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAM 458
+ILL+NIYA R D R R + E G+KKEP CS +E +H FVA D +HP
Sbjct: 460 VYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKE 519
Query: 459 IHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIH 518
I+ K I + +GY PD + V ++E++ L HSEKLA+AFAL+S+ P + I
Sbjct: 520 IYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIR 579
Query: 519 IKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+R+C DCH+A K S++ RE++VRD RFHHFR GFCSC DYW
Sbjct: 580 IVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ V ++ K D + N +++ Y+KCG ++ A +F M +D TW
Sbjct: 265 CAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTW 324
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + N E AI +F +M+R+ P++ T VL A DK GR+ +
Sbjct: 325 TAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDK-GREFFLSMI 383
Query: 122 K-YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEG 176
+ Y NV ++D+ R ++ +A + + N W L+A H G
Sbjct: 384 EAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIG 443
Query: 177 EKALRTFSEM 186
E E+
Sbjct: 444 ELVAERLLEL 453
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 17/263 (6%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALA----STGSLEQGKWVHAHVIKSGGQLVAFV 232
E A+ ++ ML G P +++ ++ A+A +GS + VHAHV++ G A V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
++LV Y G A + V+WN++++G + G + F M R G
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 293 APNQVTFLCVLTACSHAGLLDE--GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
AP VT++ VL+AC G D G + GV P+ VD+ + A
Sbjct: 119 APTPVTYVSVLSACGK-GTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSA 177
Query: 351 LKFIREMPIEPTAAVWGALL-GACRMHKNVELGAYAAERIFELDPH-DSGPHILLANIYA 408
K M + + W +LL G R+ + E A +F+ P D+ + + Y
Sbjct: 178 WKVFDGMQVRSVVS-WTSLLSGLARLGQVDE-----ARDLFDRMPERDTVSWTAMIDGYV 231
Query: 409 SAGRLNDAARARKMMKESGVKKE 431
A R +A + M+ S V +
Sbjct: 232 WAARFREALEMFREMQYSNVSAD 254
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 336/568 (59%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +K R H +L + F +D+ + N ++ Y CG A +FDE V+D+VTW
Sbjct: 121 CARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+I+ + E A L +M +L L+P++ T+ S++ A ++ G+ +H++
Sbjct: 181 NIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLER-GKFLHSYS 239
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G D N+ V +++LDMY + D ++ A +F + K+ +SW ++++G A+ ++AL
Sbjct: 240 KELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEAL 299
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M E + V +A A TG+L+QGK++H + K + LVDMY
Sbjct: 300 ALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMY 359
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK GSI+ A +VF R+ R+V +WN+++ G A HG G+ + F++M + + P+ VTF+
Sbjct: 360 AKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFI 419
Query: 301 CVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L ACSHAGL+DEG F MK K +EP HY VDLL RA +D AL FI MPI
Sbjct: 420 ALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPI 479
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+ + +W LLGACR + +L R+ EL+P G +++L+N+YA + + A +
Sbjct: 480 KANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKL 539
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIGYVPD 478
RK MK G++K P CSW+E +H FVA D +H Q I+ E++ ++ G+VP
Sbjct: 540 RKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPG 599
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+++VL +++E+E L +HSEKLA+A LISTP GS I I KN+RVC DCHS K SK
Sbjct: 600 TANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSK 659
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REI+ RD +RFHHF++G CSC D+W
Sbjct: 660 VYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 204/399 (51%), Gaps = 14/399 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDMV 59
CT + K K+A HA +L + ++ + +++ A + G L+ ARKLF +M D
Sbjct: 21 CTSISKTKQA---HALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPF 77
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHA 118
+I GY+++ P A+ L+ M+ G+ + +T VL A GA K GR+ H
Sbjct: 78 ICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAV--KLGRRFHC 135
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
LK G+ +++V ++L+ Y A +F ++ V+WN +I H K EK
Sbjct: 136 EVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEK 195
Query: 179 ALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A EM + + P + S+ A A G+LE+GK++H++ + G V N ++
Sbjct: 196 AFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAIL 255
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMY K IE A++VFNR+ ++DV+SW SML+G A+ G + + F+KM N I +++
Sbjct: 256 DMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEI 315
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T + VL+AC+ G LD+G+ L+ K + + VD+ + G +D AL+ R M
Sbjct: 316 TLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRM 375
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
+ W AL+G MH + E A +F+ HD
Sbjct: 376 RVR-NVFTWNALIGGLAMHGHGE----DAISLFDQMEHD 409
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 327/566 (57%), Gaps = 35/566 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ VH I+ ++ + N ++ Y KCGCL EARK+ D+MP +D+V+W
Sbjct: 147 CSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSW 206
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++GY+Q+ Q ++A+ + +M L L + T++S+
Sbjct: 207 NSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL---------------------- 244
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
S + Y + + +F + KN +SWN +IA + S +A+
Sbjct: 245 ------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVS 292
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G +P + +S+ A +L G+ +H ++ K + + N L+DMYA
Sbjct: 293 LFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYA 352
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E+A VF+++ RDVVSW SM++ + G G V F KML +G P+ + F+
Sbjct: 353 KCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVS 412
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACSH GLLD+G+ YF +M +++G+ P H+ VDL GRAG ++ A FI++MP+E
Sbjct: 413 VLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPME 472
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VWGALL ACR+H +++G AA+ +F+L P SG ++LL+NIYA AG D R
Sbjct: 473 PNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVR 532
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK+ G+KK P S VE VH F+A D HPQ I+ + + K+K++GY+P +
Sbjct: 533 YAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTE 592
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L + +++E L +HSEKLA+ FA+++T G+ I I KN+RVCGDCH A K SK+V
Sbjct: 593 SALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIV 652
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHF +G CSCGDYW
Sbjct: 653 SRNIIVRDCNRFHHFSNGICSCGDYW 678
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/598 (37%), Positives = 355/598 (59%), Gaps = 34/598 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCL------------------ 43
C+ + L+E + VH HI S F I + N IL YAKCG L
Sbjct: 97 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSW 156
Query: 44 -------------DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-GL 89
+EAR LFDEMP +D +WTA+++GY + DQPE A++L+S M R+
Sbjct: 157 NVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 216
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
KPN FT+SS + A+ A + G+++H ++ G D + + SSL+DMY + +D+A
Sbjct: 217 KPNIFTVSSAVAAAAAIKCIRR-GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEAR 275
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + K+ VSW ++I + + S + FSE++ P +++S V A A
Sbjct: 276 NIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLT 335
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ E G+ VH ++ + G +F ++L+DMY K G+IE A V + K D+VS S++
Sbjct: 336 TEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIG 395
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
G AQ+G +++F+ +L++G P+ VTF+ VL+AC+HAGL+++G +F ++ +KH +
Sbjct: 396 GYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLT 455
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
HY VDLL R+G ++ + EMP++P+ +W ++LG C + N++L AA+
Sbjct: 456 HTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 515
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+F+++P + ++ +ANIYA+AG+ + + RK M+E G+ K+P SW E K H+F+A
Sbjct: 516 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIA 575
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HP I + E+ +K+K+ GYVP +S VL + +++E L HSEKLA+AFA+
Sbjct: 576 ADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAI 635
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ST G+ I + KN+R C DCHSA KF SK+ +R+I +RD+ RFH F +G CSC DYW
Sbjct: 636 LSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 33/227 (14%)
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
G+K LR ++L +P +Y ++ + T +LE+GK VH H+ SG + N
Sbjct: 68 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-------- 287
++ MYAK GS+ DA KVF+ + +RDV SWN M+ G A+ GL + F++M
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSW 187
Query: 288 --LRNGIA----------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
+ G PN T + A + + G+ +
Sbjct: 188 TAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIV 247
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G++ +E + + +D+ G+ G +D A + I + I+ W +++
Sbjct: 248 RAGLDSDEVLWSSLMDMYGKCGCIDEA-RNIFDKIIDKDVVSWTSMI 293
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 334/567 (58%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R +H +L S D + +++ YA CG + AR+LFD MP +++ W
Sbjct: 72 CVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLW 131
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI Y++ E A+ L+ M+ G++P+ FT VLKA A D + GR+VH
Sbjct: 132 NVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAA-LLDLETGREVHQRVS 190
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ +V+V + ++DMYA+ +DDA +F + ++ V WN++IA + + +AL
Sbjct: 191 GTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALA 250
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M G PT + S +A A +L +G+ +H + G L + +LVDMYA
Sbjct: 251 LCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYA 310
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFL 300
KSG ++ A +F +L+KR++VSWN+M+ G HG + F KM + + P+ +TF+
Sbjct: 311 KSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFV 370
Query: 301 CVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+AC+H G+++E + +F LM + ++P HY +D+LG G + A I+ M I
Sbjct: 371 GVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSI 430
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP + +WGALL C++HKNVELG A +++ EL+P D+G ++ L+NIYA +G+ AAR
Sbjct: 431 EPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARV 490
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK+M G+KK ACSW+E K H F+ D +HP+ I+ + + + GYVPD
Sbjct: 491 RKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDI 550
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V D E+ ++ HSE+LA+AF LISTPPG+ + + KN+RVC DCH K S++
Sbjct: 551 IPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQI 610
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REII+RD NR+HHF +G CSC DYW
Sbjct: 611 VQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 1/295 (0%)
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
RL P+ + + + S + + GRQ+H L G + + + L+D+YA Q+
Sbjct: 54 RLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQV 113
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A LF + +N WN LI +AR+ E A+R + M+ G EP +F+Y V A
Sbjct: 114 GHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKAC 173
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A+ LE G+ VH V + FV +VDMYAK G ++DA VF+ + RD V WN
Sbjct: 174 AALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWN 233
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
SM+ Q+G + M NGI P T + ++A + A L G+ +
Sbjct: 234 SMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRR 293
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
G ++ + VD+ ++G + A + + E ++ W A++ MH + +
Sbjct: 294 GFGLQDKLKTSLVDMYAKSGWVQVA-RVLFEQLMKRELVSWNAMICGYGMHGHAD 347
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/531 (42%), Positives = 315/531 (59%), Gaps = 8/531 (1%)
Query: 43 LDEARKLFDEMP-VKDMVTWTALISGYSQNDQPEN-----AIILFSQMLRLGLKPNQFTL 96
L AR++FD +P D V + L+ GY+++ P + A+ +F +ML G+ P+ +T
Sbjct: 77 LAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTF 136
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
S+LKA A ++ GRQ HA +K G + YV +L++MYA A +F +
Sbjct: 137 VSLLKACAAARAGEE-GRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTD 195
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
VS+NA+IA R S +AL F EM +G +PT + SV +A A G+LE G+W
Sbjct: 196 GGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRW 255
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
VH +V K G + V L+DMYAK GS+EDA VF + +D +W+ M+ A HG
Sbjct: 256 VHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGY 315
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
G+ + FE+M + G+ P+ +TFL VL ACSH+GL+ EG YF MK HG+ P HY
Sbjct: 316 GREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPGIKHYGC 375
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
DLL R+G L+RA KFI E+PI PT +W LL AC H + ELG ERI +LD
Sbjct: 376 VTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSH 435
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
G +++ +N+ A+ G + RK+M E GV K P CS +E N VH F A D HP+
Sbjct: 436 GGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKS 495
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSY-ADQQEREAKLQVHSEKLALAFALISTPPGS 515
K E+ +++K +GYVP++SHV ++E+ L+ HSEKLA+AF L++T PG+
Sbjct: 496 QEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGA 555
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
T+ + KN+RVC DCHS K S V R II+RD NRFHHF +G CSCGDYW
Sbjct: 556 TLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 17/334 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +E R HA + + ++ T++N YA+CG AR +F +V++
Sbjct: 143 CAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSY 202
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
A+I+ ++ +P A++LF +M GLKP T+ SVL A GA + GR VH +
Sbjct: 203 NAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALE--LGRWVHDYV 260
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G V V ++L+DMYA+ ++DA +F +ESK+ +W+ +I +A G +A+
Sbjct: 261 RKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAI 320
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW----VHAHVIKSGGQLVAFVGNTL 236
F EM +EG +P ++ V A + +G + +G + H I G + V
Sbjct: 321 SLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPGIKHYGCV---- 376
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR--NGIA 293
D+ A+SG +E A K + L + + W ++L+ C HG + R FE++L+ +
Sbjct: 377 TDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHG 436
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+ V F C++ G +E LM + GV
Sbjct: 437 GDYVIF---SNLCANTGYWEEMNMVRKLMSEKGV 467
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 15/269 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VH ++ + + + +++ YAKCG L++A +F M KD W
Sbjct: 244 CALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAW 303
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+ +I Y+ + AI LF +M + G+KP+ T VL A S +G + G Q
Sbjct: 304 SVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSE--GLQYFDDM 361
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKA 179
+G + + D+ AR Q++ A+ L + + W L++ + E
Sbjct: 362 KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELG 421
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTAL-ASTGSLEQGKWV-----HAHVIKSGGQLVAFVG 233
R F +L+ + +H +F+ L A+TG E+ V V+K G +
Sbjct: 422 KRVFERILK--LDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEID 479
Query: 234 NTLVDMYAKSG---SIEDAEKVFNRLLKR 259
NT+ + +A G ++A K+ + ++ +
Sbjct: 480 NTVHEFFAGDGRHPKSQEARKMVDEVIDQ 508
>gi|449450898|ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 339/559 (60%), Gaps = 9/559 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
H+ L F N+ N ++N Y + + A +LFDEMP ++V+WT+L++GY N QP
Sbjct: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
A+ LF +MLR + PN FT ++ +KA ++ + G HA +GY N+ V SS
Sbjct: 107 STALFLFGEMLRSPVVPNDFTFATAIKACSI-LSNLRHGEMFHAHVEIFGYGGNIVVCSS 165
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-P 193
L+DMY + + + A +F ++ KN VSW ++IA +A+ + G++AL+ F E E P
Sbjct: 166 LIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHP 225
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +SV +A AS G L GK +H I G V + LVDMYAK GS++ ++KVF
Sbjct: 226 NPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVF 285
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
NR+ V+ + SM+ A++G G+ +++ FE+M+R G+ PN +T + VL ACSH+GL +
Sbjct: 286 NRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPN 345
Query: 314 EGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP--TAAVWGALL 370
EG Y M +K+G+ PE HY VD+L R G LD+A + M + P A +WGALL
Sbjct: 346 EGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALL 405
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
A R H V++ A A +++ + +G ++ L+N+YASAG + A + R MK +GV K
Sbjct: 406 SASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHK 465
Query: 431 EPACSWVETKNAVHMFVAND-DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD-- 487
EP CSW+E K++ ++F A + + P+ + RE+ +K+K GYV L + D
Sbjct: 466 EPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKG-LVFVDIE 524
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++ E K+ +HSE+LAL F LIS P G TI I KN+R+C DCH AFK S+++ERE +VR
Sbjct: 525 EEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVR 584
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D NRFHHF++G C+C +W
Sbjct: 585 DINRFHHFKNGCCTCNGFW 603
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 178/372 (47%), Gaps = 20/372 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ + HAH+ + +I + +++++ Y KC + +AR +F+ M K++V+W
Sbjct: 135 CSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSW 194
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T++I+ Y+QN + A+ +F + L + PN + L+SV+ A A G+ +H
Sbjct: 195 TSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISAC-ASLGRLVSGKVMHGAA 253
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G D + V S L+DMYA+ +D + +F + + + + + ++I A+ G K+L
Sbjct: 254 ISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSL 313
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDM 239
+ F EM+R+G +P H + V A + +G +G + + + G + T +VDM
Sbjct: 314 QLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDM 373
Query: 240 YAKSGSIE---DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAP 294
A+ G ++ D K + + W ++L+ HG ++++ + +A
Sbjct: 374 LARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAG 433
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE---------EAHYVTFVDLLGRAG 345
VT V + AG +++ MK+ GV E ++ Y+ + +
Sbjct: 434 AYVTLSNVYAS---AGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSCP 490
Query: 346 LLDRALKFIREM 357
D L +RE+
Sbjct: 491 RGDEVLCLLREL 502
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 344/545 (63%), Gaps = 3/545 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + ++E + +HAH++ + ++ A+ N +L Y+KCG ++EA +F+ + +++++W
Sbjct: 224 CGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISW 283
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA I+G+ Q+ + A+ FS M G++PN+FT S VL + G D GR H +
Sbjct: 284 TASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGC-VKDFIDGRMFHTQVI 342
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKAL 180
K G V+VG++++DMY+ +MD+A F + + + VSWNALIAG+ + EKA+
Sbjct: 343 KKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAM 402
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M++E F+YS++F A +S SL +H+ +IKS + V ++L++ Y
Sbjct: 403 EAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAY 462
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ GS+E+A +VF ++ DVVSWNS++ +Q+G + KM+ G P TFL
Sbjct: 463 TQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFL 522
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH+GL+ EGQ +F ++++ + ++PEE H VD+LGRAG L+ AL FI+++ +
Sbjct: 523 TVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTM 582
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+PTA++W LL ACR + N+++ Y AE+I +L+P+D+ ++ L+N+YA GR DA
Sbjct: 583 KPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQ 642
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R++M++ + KEP CSW+E N ++ F ++D AHP+ +++K +++ +I+ IGY P +
Sbjct: 643 RRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPT 702
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ VL +Q +E + HSEKLA+ F L+S PPG I + KN+RVC DC+S K+ S++
Sbjct: 703 TTVLHPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRI 762
Query: 540 VEREI 544
+R I
Sbjct: 763 TDRYI 767
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 255/504 (50%), Gaps = 72/504 (14%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L R +HAH++ +++ Y +CG L ARKLFD++P ++ W L
Sbjct: 817 RALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLT 876
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
++ E A+ FS+M + GL+PNQF L S+LKA G +D + G +H LK +
Sbjct: 877 GACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGH-LSDRRTGENMHTVILKNSF 935
Query: 126 ---------------------------DW----NVYVGSSLLDMYARFDQMDDAWFLFTA 154
DW ++ V ++++ YA+ + +A L
Sbjct: 936 ESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQK 995
Query: 155 LES----KNEVSWNALIAGHAR---KSEGEKALR-------------------------- 181
++ N VSWN LIAG ++ KS + R
Sbjct: 996 MQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFH 1055
Query: 182 ------TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
F EML +GF P+ + SS+ A + +L GK +H + + G + +V +
Sbjct: 1056 NHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSA 1115
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LVDMYAK G I +A+ +F + +R+ V+WNS++ G A HG + F +M + +
Sbjct: 1116 LVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLD 1175
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+TF VL ACSHAG+++ G+ F M+ K+ +EP HY VDLLGRAG L A I
Sbjct: 1176 HLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLI 1235
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
+ MP+EP VWGALLGACR H N+EL AAE +FEL+P G +LL+N+YA AGR
Sbjct: 1236 KAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWG 1295
Query: 415 DAARARKMMKESGVKKEPACSWVE 438
+AA+ +KMMK+ K P CSW+E
Sbjct: 1296 NAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 156/306 (50%), Gaps = 2/306 (0%)
Query: 88 GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
G Q+ S++ G + GR+ H F +K G + +V +SL+DMYA+ ++D
Sbjct: 109 GFPHRQYVFSALSFCGREGCVE--LGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDS 166
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A ++ + S + + N LI+ +AR +A + F ++ G P H++YS++ +
Sbjct: 167 AVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
++++GK +HAHV+K VGN L+ +Y+K G +E+AE VF L +R+++SW +
Sbjct: 227 ISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTAS 286
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+ G QHG K ++ F M +GI PN+ TF VL +C +G+ + + K G+
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
+D+ G +D A K ++M + W AL+ +++ +E A
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFC 406
Query: 388 RIFELD 393
R+ + D
Sbjct: 407 RMVKED 412
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT++ L+ + +H + + + D+ +++ +++ YAKCG + EA+ LF MP ++ VTW
Sbjct: 1085 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 1144
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI GY+ + AI LF+QM K + T ++VL A +
Sbjct: 1145 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQE 1204
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
KY + + + ++D+ R ++ +A+ L A+ + ++ W AL+ G R +
Sbjct: 1205 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALL-GACRNHGNIELA 1263
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
+E L E EP S + + L + + G+W +A
Sbjct: 1264 EVAAEHLFE-LEPESPGSSLLLSNLYA----DAGRWGNA 1297
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 162/383 (42%), Gaps = 35/383 (9%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F+ + +Y+ A +L +G+ +HAH++ G + + L+ Y + G + +A
Sbjct: 799 FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNAR 858
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
K+F+++ ++ W + CA+ G + + F +M + G+ PNQ +L AC H
Sbjct: 859 KLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLS 918
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ ++ K+ E + + + + G +++A + + + ++ V A++
Sbjct: 919 DRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACR-VFDWIVDKDLVVMNAMV 977
Query: 371 GACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
H V +++ + + P+ + L+A ++ G + + ++M +GV
Sbjct: 978 SGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAG-FSQVGDKSMVSEVFRLMTANGV 1036
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
+ + SW + + FV N H+ + E + Q G+ P S + S
Sbjct: 1037 EPD-VVSWT---SVISGFVQNFHN-------HEGFDAFKEMLDQ-GFCPSSVTISSLLPA 1084
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRV----------CGDCHSAFKFASK 538
A L+ H +++ +A++ I ++K++ V CG A
Sbjct: 1085 CTNVANLR-HGKEIH-GYAMV-------IGVEKDVYVRSALVDMYAKCGYISEAKILFYM 1135
Query: 539 VVEREIIVRDTNRFHHFRDGFCS 561
+ ER + ++ F + G+C+
Sbjct: 1136 MPERNTVTWNSLIFGYANHGYCN 1158
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 338/567 (59%), Gaps = 16/567 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH + + + ++ N++ YAK G L+ A + F +P K+++TWT +IS ++++
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDEN 260
Query: 74 -PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E + LF ML G+ PN+FTL+SV+ G D G+QV AFC K G N+ V
Sbjct: 261 YTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGT-RLDLNLGKQVQAFCFKIGCQTNIPVK 319
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-----------KSEGEKALR 181
+S + +Y R + D+A F ++ + ++WNA+I+G+A+ +S G +AL+
Sbjct: 320 NSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALK 379
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + R +P F++SS+ + +S +LEQG+ +HA IK+G V + LV+MY
Sbjct: 380 VFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYN 439
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IEDA K F + R +V+W SM++G +QHG + ++ FE M G+ PN++TF+C
Sbjct: 440 KCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVC 499
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ACS+AGL ++ + YF +MK ++ +EP HY VD+ R G LD A FIR E
Sbjct: 500 VLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFE 559
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+W +L+ CR H N+EL YAA+R+ EL P ++LL N+Y S R +D AR R
Sbjct: 560 PNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVR 619
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ G+ SW+ K+ V+ F AND H +++ + EK K IGY P S
Sbjct: 620 KLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQS 679
Query: 481 HVLSYA--DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
LS + D++ ++ HSE+LA+A L+ TPPG+T+ + KNI +C DCHS+ KF S
Sbjct: 680 AELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSL 739
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ REI+VRD+ R H F+DG CSCGD+
Sbjct: 740 LANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 193/387 (49%), Gaps = 14/387 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L AR +H H++ + D+ + +++NAY +CG +AR LFD+MP K++VTW
Sbjct: 88 CVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTW 147
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALI+GY+ N Q A+ +F +ML G P+ +TL ++L A A D G QVH + +
Sbjct: 148 TALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNAD-LGSQVHGYTI 206
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-KSEGEKAL 180
KY +G+SL MYA+ ++ A F + KN ++W +I+ A ++ E L
Sbjct: 207 KYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGL 266
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML +G P F+ +SV + + L GK V A K G Q V N+ + +Y
Sbjct: 267 TLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLY 326
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----------HGLGKATVRWFEKMLR 289
+ G ++A + F + +++WN+M++G AQ G ++ F + R
Sbjct: 327 LRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKR 386
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+ + P+ TF +L+ CS L++G+ A K G + V++ + G ++
Sbjct: 387 SAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIED 446
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMH 376
A K EM I T W +++ H
Sbjct: 447 ATKAFVEMSIR-TLVTWTSMISGYSQH 472
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 145/281 (51%), Gaps = 3/281 (1%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
R +H +K G +++V +SL++ Y R DA LF + KN V+W ALI G+
Sbjct: 97 ARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTV 156
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
S+ +AL F EML G P+H++ ++ A +++ + + G VH + IK + +
Sbjct: 157 NSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSI 216
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNG 291
GN+L MYAKSGS+E A + F + ++V++W +M++ CA+ + + F ML +G
Sbjct: 217 GNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDG 276
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ PN+ T V++ C L+ G+ A K G + + + L R G D A+
Sbjct: 277 VLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAM 336
Query: 352 KFIREMPIEPTAAVWGALL-GACRMHKNVELGAYAAERIFE 391
+F EM + + W A++ G ++ + + +A R F+
Sbjct: 337 RFFEEMD-DVSIITWNAMISGYAQIMETAKDDLHARSRGFQ 376
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L++ +HA + + F +D+ + + ++N Y KCGC+++A K F EM ++ +VTW
Sbjct: 403 CSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTW 462
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISGYSQ+ +P+ AI LF M G++PN+ T VL A +K
Sbjct: 463 TSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKE 522
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
+Y + V ++DM+ R ++DDA+ F+ NE W++L+AG
Sbjct: 523 EYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAG 571
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 8/237 (3%)
Query: 153 TALESKNEVSWNAL-IAGHARKSEGEKALRTFS-----EMLREGFEPTHFSYSSVFTALA 206
+++ + ++ +WN I S E LR MLREG Y +
Sbjct: 30 SSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCV 89
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
TGSL + +H H++K+G FV +LV+ Y + G+ +DA +F+++ +++VV+W +
Sbjct: 90 ETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTA 149
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++TG + + F +ML G P+ T +L ACS + D G K+
Sbjct: 150 LITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYR 209
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN-VELG 382
+ + + ++G L+ A++ R +P + W ++ AC +N ELG
Sbjct: 210 ALSITSIGNSLCRMYAKSGSLESAMRAFRMVP-DKNVITWTTMISACAEDENYTELG 265
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 338/562 (60%), Gaps = 12/562 (2%)
Query: 8 LKEARIVHA-HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
L+E RI A + + D+ + ++ Y + G L EAR LFDEMP +++V+WT +I+
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY QN Q + A LF M + N+ + +++LK D+ +A +K
Sbjct: 293 GYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK---- 344
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V ++++ + + ++ A +F + K+E +W+A+I + RK AL F M
Sbjct: 345 -SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMM 403
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
REG P S SV + A +L+ G+ +HA +++S L +V + L+ MY K G++
Sbjct: 404 QREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNL 463
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A++VF+R +DVV WNS++TG AQHGLG +R F M +GI P+ VTF+ VL+AC
Sbjct: 464 AKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC 523
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
S+ G + +G F M+ K+ VE + HY VDLLGRAG L+ A+ I +MP+E A +
Sbjct: 524 SYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAII 583
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGACR H ++L AA+++ L+P ++GP ILL+NIYAS GR +D A R+ M++
Sbjct: 584 WGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRD 643
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDA-HPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
V K P CSW+ + VH F D + HP+ + I++ +S +++ GY PD S VL
Sbjct: 644 RRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLH 703
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D++E+ L+ HSEKLA+A+ L+ P G I + KN+RVCGDCH+A K +KV REI
Sbjct: 704 DVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREI 763
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
I+RD NRFHHF+DG CSC DYW
Sbjct: 764 ILRDANRFHHFKDGSCSCRDYW 785
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 178/428 (41%), Gaps = 69/428 (16%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
N I +N+++ Y++ G +++AR +FDEM K++++W ++++GY QN +P+ A +F +M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQ-----VHAFCLKYGY-------------- 125
+S + + F R V + GY
Sbjct: 156 SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFW 215
Query: 126 --------DWNVYVGS-----------SLLDM---------------YARFDQMDDAWFL 151
W V +G L DM Y + ++ +A L
Sbjct: 216 QMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARML 275
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + +N VSW +I G+ + + + A + F M E S++++ + G L
Sbjct: 276 FDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRL 331
Query: 212 -EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
E + +A IKS N ++ + ++G + A +VF+++ ++D +W++M+
Sbjct: 332 DEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ GL + F M R GI PN + + VL+ C+ LD G+ A + + + +
Sbjct: 387 YERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLD 446
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ + + G L +A + ++ +W +++ H LG A R+F
Sbjct: 447 VYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG---LGVEAL-RVF 501
Query: 391 ELDPHDSG 398
D H SG
Sbjct: 502 H-DMHFSG 508
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA ++ S F D+ + + +L+ Y KCG L +A+++FD VKD+V W
Sbjct: 422 CAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMW 481
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+GY+Q+ A+ +F M G+ P+ T VL A K ++
Sbjct: 482 NSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMET 541
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
KY + + + ++D+ R ++++A L + + + + W AL+
Sbjct: 542 KYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 338/562 (60%), Gaps = 12/562 (2%)
Query: 8 LKEARIVHA-HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
L+E RI A + + D+ + ++ Y + G L EAR LFDEMP +++V+WT +I+
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY QN Q + A LF M + N+ + +++LK D+ +A +K
Sbjct: 293 GYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK---- 344
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V ++++ + + ++ A +F + K+E +W+A+I + RK AL F M
Sbjct: 345 -SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMM 403
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
REG P S SV + A +L+ G+ +HA +++S L +V + L+ MY K G++
Sbjct: 404 QREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNL 463
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A++VF+R +DVV WNS++TG AQHGLG +R F M +GI P+ VTF+ VL+AC
Sbjct: 464 AKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC 523
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
S+ G + +G F M+ K+ VE + HY VDLLGRAG L+ A+ I +MP+E A +
Sbjct: 524 SYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAII 583
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGACR H ++L AA+++ L+P ++GP ILL+NIYAS GR +D A R+ M++
Sbjct: 584 WGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRD 643
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDA-HPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
V K P CSW+ + VH F D + HP+ + I++ +S +++ GY PD S VL
Sbjct: 644 RRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLH 703
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D++E+ L+ HSEKLA+A+ L+ P G I + KN+RVCGDCH+A K +KV REI
Sbjct: 704 DVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREI 763
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
I+RD NRFHHF+DG CSC DYW
Sbjct: 764 ILRDANRFHHFKDGSCSCRDYW 785
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 178/428 (41%), Gaps = 69/428 (16%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM 84
N I +N+++ Y++ G +++AR +FDEM K++++W ++++GY QN +P+ A +F +M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 85 LRLGLKPNQFTLSSVLKASGAGATDDKFGRQ-----VHAFCLKYGY-------------- 125
+S + + F R V + GY
Sbjct: 156 SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFW 215
Query: 126 --------DWNVYVGS-----------SLLDM---------------YARFDQMDDAWFL 151
W V +G L DM Y + ++ +A L
Sbjct: 216 QMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARML 275
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + +N VSW +I G+ + + + A + F M E S++++ + G L
Sbjct: 276 FDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRL 331
Query: 212 -EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
E + +A IKS N ++ + ++G + A +VF+++ ++D +W++M+
Sbjct: 332 DEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ GL + F M R GI PN + + VL+ C+ LD G+ A + + + +
Sbjct: 387 YERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLD 446
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ + + G L +A + ++ +W +++ H LG A R+F
Sbjct: 447 VYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG---LGVEAL-RVF 501
Query: 391 ELDPHDSG 398
D H SG
Sbjct: 502 H-DMHFSG 508
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA ++ S F D+ + + +L+ Y KCG L +A+++FD VKD+V W
Sbjct: 422 CAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMW 481
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+GY+Q+ A+ +F M G+ P+ T VL A K ++
Sbjct: 482 NSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMET 541
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
KY + + + ++D+ R ++++A L + + + + W AL+
Sbjct: 542 KYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/601 (38%), Positives = 353/601 (58%), Gaps = 39/601 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L A+ +H + F D+ + N +++ + KC ++ AR +FD+M VKD+V+W
Sbjct: 87 CAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSW 146
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ Y I+LF +M G++ N T+SS+L A A K GR+VH F L
Sbjct: 147 TSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPAC---ADYIKLGREVHGFIL 203
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + NVYV S+L++MYA + A +F ++ ++ VSWN ++ + E E+ L
Sbjct: 204 RNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLG 263
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTG-------------------------------- 209
F +M +EG + S+++ + G
Sbjct: 264 LFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCT 323
Query: 210 ---SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
SL GK +H +V + + LV +YAK G +E + VFN + ++DVV+WN+
Sbjct: 324 NLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNT 383
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KH 325
M+ + HG G ++ F KML +G+ PN VTF+ VL+ CSH+ L DEG F M +H
Sbjct: 384 MIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEH 443
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+ P+ HY VD+L RAG L+ A FIR+MPIEPTAA WGALLGACR++KNVELG A
Sbjct: 444 SITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLA 503
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A ++FE++P ++G ++LL+NI +A + +A+ RKMM++ G+ K P SWV+ KN V+
Sbjct: 504 ASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYS 563
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
FV D ++ Q+ MI++ EI EK++ GY P++ VL DQ++RE L HSE+LA+A
Sbjct: 564 FVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVA 623
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F ++++ +T+ + KN+R+CGDCH+A K +K+V +IIVRD+ RFHHFRDG+C+C D+
Sbjct: 624 FGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDF 683
Query: 566 W 566
W
Sbjct: 684 W 684
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 43/385 (11%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
I + T LN+ G L A LFD++P D+ TWT LISG++Q+ P+ AI ++S +L
Sbjct: 15 IKLIKTCLNS----GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLS 70
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
++P++F L SV KA A D +++H +++G++ ++ +G++L+DM+ + ++
Sbjct: 71 RNVRPDKFVLLSVAKACAASG-DLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVN 129
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F + K+ VSW ++ + + + F EM G + SS+ A A
Sbjct: 130 GARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
++ G+ VH ++++ + +V + LV+MYA S ++ A VF+ + RD+VSWN
Sbjct: 190 DY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNV 247
Query: 267 MLT-----------------------------------GCAQHGLGKATVRWFEKMLRNG 291
MLT GC Q+G + + KM +G
Sbjct: 248 MLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSG 307
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
I PN++T + L C++ L G+ + +H + V L + G L+ +
Sbjct: 308 IKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSR 367
Query: 352 KFIREMPIEPTAAVWGALLGACRMH 376
MP + A W ++ A MH
Sbjct: 368 HVFNTMPRKDVVA-WNTMIMANSMH 391
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 334/560 (59%), Gaps = 5/560 (0%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R++H ++ S + + ++ Y + G A KLFDEMP +D+V+W +LISGYS
Sbjct: 50 CRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 71 NDQPENAIILFSQML--RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
+ S+M+ +G +PN+ T S++ A G + ++ GR +H +K+G
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE-GRCIHGLVMKFGVLEE 168
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V V ++ ++ Y + + + LF L KN VSWN +I H + EK L F+ R
Sbjct: 169 VKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRR 228
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G EP ++ +V + G + + +H ++ G + L+D+Y+K G +ED
Sbjct: 229 VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLED 288
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
+ VF+ + D ++W +ML A HG G+ ++ FE M+ GI+P+ VTF +L ACSH
Sbjct: 289 SSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSH 348
Query: 309 AGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+GL++EG+ YF M K++ ++P HY VDLLGR+GLL A I+EMP+EP++ VWG
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
ALLGACR++K+ +LG AAER+FEL+P D +++L+NIY+++G DA+R R +MK+ G
Sbjct: 409 ALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG 468
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIGYVPDSSHVLSYA 486
+ + CS++E N +H FV D +HP+ I KK +EI +K+K ++GY + VL
Sbjct: 469 LVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDV 528
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ +E + HSEK+A+AF L+ P I I+KN+R+CGDCH K S + +R II+
Sbjct: 529 GEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIII 588
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD+ RFHHF DG CSC DYW
Sbjct: 589 RDSKRFHHFLDGSCSCSDYW 608
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 168/335 (50%), Gaps = 18/335 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +E R +H ++ ++ + N +N Y K G L + KLF+++ +K++V+W
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSW 203
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+I + QN E + F+ R+G +P+Q T +VL++ G + + +H
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV--RLAQGIHGLI 261
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G+ N + ++LLD+Y++ +++D+ +F + S + ++W A++A +A G A+
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS---GGQLVAFVGNTLV 237
+ F M+ G P H +++ + A + +G +E+GK + K +L + + +V
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY--SCMV 379
Query: 238 DMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LG-KATVRWFEKMLRNGI 292
D+ +SG ++DA + + ++ W ++L C + LG KA R FE R+G
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG- 438
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
N V + +A +GL + LMK+ G+
Sbjct: 439 -RNYVMLSNIYSA---SGLWKDASRIRNLMKQKGL 469
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
SS+ A+ S S+E + +H V+KS F+G+ LV Y + G AEK+F+ + +
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 259 RDVVSWNSMLTGCAQHG-LGKATVRWFEKMLRN-GIAPNQVTFLCVLTACSHAGLLDEGQ 316
RD+VSWNS+++G + G LGK M+ G PN+VTFL +++AC + G +EG+
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L+ K GV E F++ G+ G L + K ++ I+ + W ++
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS-WNTMI 207
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/597 (37%), Positives = 341/597 (57%), Gaps = 33/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L+ + V ++I + M N +++ Y KCG + AR++FDE K++V +
Sbjct: 241 CAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMY 300
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++S Y ++ + +++ +ML+ G +P++ T+ S + A+ A D G+ HA+ L
Sbjct: 301 NTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTI-AACAQLGDLSVGKSSHAYVL 359
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + ++++DMY + + + A +F + +K V+WN+LIAG R + E A R
Sbjct: 360 RNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWR 419
Query: 182 TFSEMLR-------------------------------EGFEPTHFSYSSVFTALASTGS 210
F EML +G + + +A G+
Sbjct: 420 IFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGA 479
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L+ KWV ++ K+ + +G LVDM+++ G A VF R+ KRDV +W + +
Sbjct: 480 LDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGV 539
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEP 329
A G + + F +ML + P+ V F+ +LTACSH G +D+G Q ++++ K HG+ P
Sbjct: 540 MAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRP 599
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VDLLGRAGLL+ A+ I+ MPIEP VWG+LL ACR HKNVEL YAAE++
Sbjct: 600 HIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKL 659
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
+L P G H+LL+NIYASAG+ D AR R MKE GV+K P S +E + +H F +
Sbjct: 660 TQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSG 719
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D++H + I EI+ ++ + GYVPD+++VL D+QE+E L HSEKLA+A+ LI
Sbjct: 720 DESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLI 779
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+T G I + KN+R+C DCHS K SK+ REI VRD NR+H F++GFCSC DYW
Sbjct: 780 TTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 198/410 (48%), Gaps = 33/410 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L E VH +L + DI + N++++ YA+CG +D RKLFD M +++V+W
Sbjct: 140 CSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSW 199
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GYS D + A+ LF QM G++PN T+ V+ A A D + G++V ++
Sbjct: 200 TSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISAC-AKLKDLELGKKVCSYIS 258
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + + ++L+DMY + + A +F +KN V +N +++ + L
Sbjct: 259 ELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLV 318
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EML++G P + S A A G L GK HA+V+++G + + N ++DMY
Sbjct: 319 ILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYM 378
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG------------LGKATVRW------ 283
K G E A KVF + + VV+WNS++ G + G L + V W
Sbjct: 379 KCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGA 438
Query: 284 -------------FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
F +M GI ++VT + + +AC + G LD + ++K+ + +
Sbjct: 439 LVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVD 498
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
VD+ R G A+ + M +A W A +G M N E
Sbjct: 499 LQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSA-WTAAIGVMAMEGNTE 547
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 195/393 (49%), Gaps = 13/393 (3%)
Query: 6 KKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCL---DEARKLF--DEMPVKDM 58
K LKE + +H ++ G + N ++ + + G L D AR F D+ + +
Sbjct: 36 KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASL 95
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+ LI GY+ + AI+L+ QML +G+ P+++T +L A + G QVH
Sbjct: 96 FMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSE-GVQVHG 154
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
LK G + +++V +SL+ YA ++D LF + +N VSW +LI G++ + ++
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKE 214
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F +M G EP + V +A A LE GK V +++ + G +L + N LVD
Sbjct: 215 AVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVD 274
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K G I A ++F+ +++V +N++++ H + ++ML+ G P++VT
Sbjct: 275 MYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVT 334
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L + AC+ G L G+ A + ++G+E + +D+ + G + A K MP
Sbjct: 335 MLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP 394
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
T W +L+ ++EL A RIF+
Sbjct: 395 -NKTVVTWNSLIAGLVRDGDMEL----AWRIFD 422
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 336/573 (58%), Gaps = 33/573 (5%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N+++ + K G ++EA KLF+EM KD+V+W+ALIS Y QN+ E A+ILF +M
Sbjct: 222 NVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMN 281
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR---- 141
G+ ++ + SVL A G+ VH +K G + V + ++L+ MY+
Sbjct: 282 ANGIMVDEVVVLSVLSACSRLLVVIT-GKLVHGLVVKVGIETYVNLQNALIHMYSSCEEV 340
Query: 142 ------------FDQM---------------DDAWFLFTALESKNEVSWNALIAGHARKS 174
DQ+ + A LF ++ K+ VSW+A+I+G+A++
Sbjct: 341 VTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQD 400
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ L F EM EG +P SV +A +L+QGKW+HA++ K+G ++ +G
Sbjct: 401 RFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGT 460
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
TL++MY K G +EDA +VF L ++ V +WN+++ G A +GL +++ F +M +G+ P
Sbjct: 461 TLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTP 520
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
N++TF+ VL AC H GL+DEG +F +++++H + P HY VDLLGRAG+L A +
Sbjct: 521 NEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEEL 580
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I MP+ P + WGALLGAC+ + + E G ++ EL P G ++LL+NIYAS G
Sbjct: 581 IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNW 640
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
D R MM++ GV K P CS +E VH F+A D HPQ I E+++K+K
Sbjct: 641 VDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLE 700
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GY PD+ V D++E+E L HSEKLA+AF LI+ P + I I KN+R+C DCH+A
Sbjct: 701 GYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAA 760
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK REI+VRD +RFHHF+ G CSC DYW
Sbjct: 761 KLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 204/476 (42%), Gaps = 111/476 (23%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
+ + + H+L F +D+ +QNT++N YA CG L +ARK+FD V DMV+W ++++GY
Sbjct: 144 DGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYV 203
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
E A ++ +M P + NV
Sbjct: 204 LVGNVEEAKDVYDRM------PER----------------------------------NV 223
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+S++ ++ + +++A LF ++ K+ VSW+ALI+ + + E+AL F EM
Sbjct: 224 IASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNAN 283
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA-------- 241
G SV +A + + GK VH V+K G + + N L+ MY+
Sbjct: 284 GIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTA 343
Query: 242 -----------------------KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
K G IE A +F+ + +D VSW++M++G AQ
Sbjct: 344 QKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFT 403
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV 338
T+ F++M G P++ + V++AC+H LD+G+ A ++K+G++ T +
Sbjct: 404 ETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLI 463
Query: 339 DL-------------------------------LGRAGLLDRALKFIREMP---IEPTAA 364
++ L GL+D++LK EM + P
Sbjct: 464 NMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEI 523
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI----LLANIYASAGRLNDA 416
+ A+LGACR V+ G + + H GP+I + ++ AG L +A
Sbjct: 524 TFVAVLGACRHMGLVDEGHRHFNSMIQ--EHKIGPNIKHYGCMVDLLGRAGMLKEA 577
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 178/367 (48%), Gaps = 51/367 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + ++VH ++ + + +QN +++ Y+ C + A+KLF E D ++W
Sbjct: 299 CSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISW 358
Query: 62 TA-------------------------------LISGYSQNDQPENAIILFSQMLRLGLK 90
+ +ISGY+Q D+ ++LF +M G K
Sbjct: 359 NSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTK 418
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ L SV+ A A D+ G+ +HA+ K G N+ +G++L++MY + ++DA
Sbjct: 419 PDETILVSVISACTHLAALDQ-GKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALE 477
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F LE K +WNALI G A +K+L+TFSEM G P ++ +V A G
Sbjct: 478 VFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGL 537
Query: 211 LEQG-----KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSW 264
+++G + H I G + G +VD+ ++G +++AE++ + + DV +W
Sbjct: 538 VDEGHRHFNSMIQEHKI---GPNIKHYG-CMVDLLGRAGMLKEAEELIESMPMAPDVSTW 593
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA--CSHAGLLD--EGQGYFA 320
++L C ++G + R K++ + P+ F +L+ S +D E +G
Sbjct: 594 GALLGACKKYGDNETGERIGRKLVE--LHPDHDGFNVLLSNIYASKGNWVDVLEVRG--- 648
Query: 321 LMKKHGV 327
+M++HGV
Sbjct: 649 MMRQHGV 655
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Query: 124 GYDWNVYVGSSLLDMYAR--FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ + + S LL F ++ ++ +F+ +E+ N N ++ G+ +++ KA+
Sbjct: 53 GFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIW 112
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ ML +++Y +F + + + GK + HV+K G ++ NTL++MYA
Sbjct: 113 VYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYA 172
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFL 300
G++ DA KVF+ D+VSWNSML G G + +++M RN IA N + L
Sbjct: 173 VCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVL 232
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/568 (37%), Positives = 336/568 (59%), Gaps = 34/568 (5%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCG-CLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
+L S D+ NT++ A + L AR LFD MP +D +W+A++S ++++ QP
Sbjct: 83 LLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRA 142
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF-----------------GRQVHAF 119
A+ ++ +MLR G+ D++F GR++H
Sbjct: 143 ALAIYRRMLR---------------EPGSAGVDNEFTASSALAAATAARCARAGRELHCH 187
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++ G D + V S+L DMYA+ ++DDA +F + ++ VSW A++ + +
Sbjct: 188 VVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEG 247
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R F MLR G +P F+Y+ V A A S + GK VH + KS F + LV M
Sbjct: 248 FRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHM 307
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G + A +VF + K D+VSW +M++G AQ+G +R+F+ +LR+G P+ VTF
Sbjct: 308 YSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTF 367
Query: 300 LCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+AC+HAGL+D+G F +K ++G+E HY +DLL R+GL +RA + I M
Sbjct: 368 VGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMS 427
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P +W +LLG CR+HKNV L +AAE +FE++P + ++ LANIYAS G ++
Sbjct: 428 VKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVEN 487
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R++M+ G+ K PA SW+E +H+F+ D HPQ ++ +++ K+++ GYV D
Sbjct: 488 TRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVAD 547
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ VL + ++++ + HSE+LA+AF +I+TP G+ I + KN+R+CGDCH+ K SK
Sbjct: 548 TGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISK 607
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V+REIIVRD+NRFHHF++G CSC DYW
Sbjct: 608 IVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 172/319 (53%), Gaps = 6/319 (1%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H H++ D + + + + YAKCG +D+AR +FD MPV+D+V+WTA++ Y
Sbjct: 182 RELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDA 241
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ LF +MLR G++PN+FT + VL+A A T +K G+QVH K + +
Sbjct: 242 RRDGEGFRLFVRMLRSGIQPNEFTYAGVLRAC-AEFTSEKLGKQVHGRMTKSRAGDSCFA 300
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
S+L+ MY+++ M A +F + + VSW A+I+G+A+ + ++ALR F +LR G
Sbjct: 301 ESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGC 360
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGSIEDA 249
P H ++ V +A A G +++G + H IK G + A ++D+ ++SG E A
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLSIF-HSIKDEYGIEHTADHYACVIDLLSRSGLFERA 419
Query: 250 EKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
E++ N + +K + W S+L GC H RW + L N T++ + +
Sbjct: 420 EEMINTMSVKPNKFLWASLLGGCRIHK-NVRLARWAAEALFEIEPENPATYVTLANIYAS 478
Query: 309 AGLLDEGQGYFALMKKHGV 327
GL DE + +M+ G+
Sbjct: 479 VGLFDEVENTRRIMELKGI 497
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K + VH + S + ++ +++ Y+K G + A ++F MP D+V+W
Sbjct: 273 CAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSW 332
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY+QN QP+ A+ F +LR G +P+ T VL A DK H+
Sbjct: 333 TAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKD 392
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
+YG + + ++D+ +R + A + + K N+ W +L+ G R + +
Sbjct: 393 EYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGG-CRIHKNVRLA 451
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
R +E L E +Y ++ AS G ++
Sbjct: 452 RWAAEALFEIEPENPATYVTLANIYASVGLFDE 484
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/572 (40%), Positives = 332/572 (58%), Gaps = 30/572 (5%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L +L +AR H+ D NT+L+ + G D AR+LF MPV+D+V+W +
Sbjct: 62 LGRLADAR----HLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTM 117
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
+SG S++ E A +F M P + ++S SG + D +
Sbjct: 118 VSGLSKSGAVEEAKAVFLAM------PVRNSVSWNAMVSGFACSRD----------MSAA 161
Query: 125 YDW--------NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
+W + + ++++ Y + A F A+ +N VSWNA++AG+ + S
Sbjct: 162 EEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHA 221
Query: 177 EKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+ ALR F M+RE +P + SSV ++ +L GK +H +K VG +
Sbjct: 222 DDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTS 281
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV MY K G + A K+F + RDVV+WN+M++G AQHG GK + FE+M G+ PN
Sbjct: 282 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 341
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+TF+ VLTAC H GL D G F M++ +G+EP HY VDLL RAG L+RA+ I
Sbjct: 342 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 401
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R MP EP + +G LL ACR++KN+E AA ++ E DP +G ++ LANIYA A + +
Sbjct: 402 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 461
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
D +R R+ MK++ V K P SW+E K +H F +ND HPQ +IH+K +++E++K +G
Sbjct: 462 DVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMG 521
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD VL D+ + L HSEKLA++F LIST PG T+ I KN+RVCGDCH+A K
Sbjct: 522 YVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAK 581
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ +REII+RDT RFHHFR G CSCGDYW
Sbjct: 582 VISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L + +H + ++ + ++++ Y KCG L A KLF EM +D+V W
Sbjct: 251 CSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAW 310
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ + AI LF +M G++PN T +VL A D R
Sbjct: 311 NAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 370
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA 148
YG + V S ++D+ R +++ A
Sbjct: 371 LYGIEPRVDHYSCMVDLLCRAGKLERA 397
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE----PTHFSYSSVFTALAS 207
F + K ++N L+AG+AR AL ++ R F+ P SY+++ + +
Sbjct: 40 FASTPRKTTATYNCLLAGYAR------ALGRLADA-RHLFDRIPTPDAVSYNTLLSCHFA 92
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
+G + + + A + +V++ NT+V +KSG++E+A+ VF + R+ VSWN+M
Sbjct: 93 SGDADGARRLFASMPVR--DVVSW--NTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 148
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
++G A A WF G + V + +++ G + + YF M +
Sbjct: 149 VSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNL 205
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKF----IREMPIEPTAAVWGALLGAC 373
A +V + D AL+ +RE ++P A+ ++L C
Sbjct: 206 VSWNAVVAGYV----KNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/572 (40%), Positives = 332/572 (58%), Gaps = 30/572 (5%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L +L +AR H+ D NT+L+ + G D AR+LF MPV+D+V+W +
Sbjct: 111 LGRLADAR----HLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTM 166
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
+SG S++ E A +F M P + ++S SG + D +
Sbjct: 167 VSGLSKSGAVEEAKAVFLAM------PVRNSVSWNAMVSGFACSRD----------MSAA 210
Query: 125 YDW--------NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
+W + + ++++ Y + A F A+ +N VSWNA++AG+ + S
Sbjct: 211 EEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHA 270
Query: 177 EKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+ ALR F M+RE +P + SSV ++ +L GK +H +K VG +
Sbjct: 271 DDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTS 330
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV MY K G + A K+F + RDVV+WN+M++G AQHG GK + FE+M G+ PN
Sbjct: 331 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 390
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+TF+ VLTAC H GL D G F M++ +G+EP HY VDLL RAG L+RA+ I
Sbjct: 391 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 450
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R MP EP + +G LL ACR++KN+E AA ++ E DP +G ++ LANIYA A + +
Sbjct: 451 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 510
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
D +R R+ MK++ V K P SW+E K +H F +ND HPQ +IH+K +++E++K +G
Sbjct: 511 DVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMG 570
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD VL D+ + L HSEKLA++F LIST PG T+ I KN+RVCGDCH+A K
Sbjct: 571 YVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAK 630
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ +REII+RDT RFHHFR G CSCGDYW
Sbjct: 631 VISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L + +H + ++ + ++++ Y KCG L A KLF EM +D+V W
Sbjct: 300 CSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAW 359
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ + AI LF +M G++PN T +VL A D R
Sbjct: 360 NAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 419
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
YG + V S ++D+ R +++ A L ++
Sbjct: 420 LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 453
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE----PTHFSYSSVFTALAS 207
F + K ++N L+AG+AR AL ++ R F+ P SY+++ + +
Sbjct: 89 FASTPRKTTATYNCLLAGYAR------ALGRLADA-RHLFDRIPTPDAVSYNTLLSCHFA 141
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
+G + + + A + +V++ NT+V +KSG++E+A+ VF + R+ VSWN+M
Sbjct: 142 SGDADGARRLFASMPVR--DVVSW--NTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 197
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
++G A A WF G + V + +++ G + + YF M +
Sbjct: 198 VSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNL 254
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKF----IREMPIEPTAAVWGALLGAC 373
A +V + D AL+ +RE ++P A+ ++L C
Sbjct: 255 VSWNAVVAGYV----KNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 300
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/570 (40%), Positives = 330/570 (57%), Gaps = 18/570 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
K + L +L +AR + S D NT+L+ + CG +D AR++F MPVKD+ +
Sbjct: 55 KASGLIRLADAR----RLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTS 110
Query: 61 WTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHA 118
W ++SG S+N E A +F M +R + N + + L SG GA +D F
Sbjct: 111 WNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWN--AMVAALACSGDMGAAEDLFRNAPEK 168
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ + ++++ Y + A F A+ +N VSWNA++AG+ + S +
Sbjct: 169 T--------DAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADD 220
Query: 179 ALRTFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
ALR F M+ + +P + SSV ++ +L G+ VH +K VG +L+
Sbjct: 221 ALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLL 280
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY K G + DA KVF+ + +D+V+WN+M++G AQHG G ++ FEKM G+ P+ +
Sbjct: 281 SMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWI 340
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
T L VLTAC H GL D G F M++ + +EP+ HY VDLL RAGLL+RA+ I
Sbjct: 341 TLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHS 400
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP EP + +G LL ACR++KN+E +AA ++ E DP ++G ++ LANIYA A + D
Sbjct: 401 MPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADV 460
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
+R R+ MK++ V K P SW+E K H F +ND HPQ +IH K + +K +GYV
Sbjct: 461 SRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYV 520
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD L + + L HSEKLA+AF LIST PG T+ I KN+R+CGDCH+A K
Sbjct: 521 PDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLI 580
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ +REII+RDT RFHHFR G CSCGDYW
Sbjct: 581 SKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 340/598 (56%), Gaps = 45/598 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +H ++ + D + + ++ YAKCGC EA+++F + ++ V+W
Sbjct: 301 CARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSW 360
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T LI G+ Q ++ LF+QM + +QF L++++ D G Q+H+ CL
Sbjct: 361 TVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC-CNTMDICLGSQLHSLCL 419
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT---------------------------- 153
K G+ V V +SL+ MYA+ + +A +F
Sbjct: 420 KSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKARE 479
Query: 154 ---ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTG 209
+ ++N ++WNA++ + + E L+ +S+ML E P +Y ++F A G
Sbjct: 480 FFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIG 539
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ + G + H +K G L V N ++ MY+K G I +A K F+ L ++D+VSWN+M+T
Sbjct: 540 ANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMIT 599
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G +QHG+GK + F+ +L G P+ ++++ VL+ CSH+GL++EG+ YF +MK+ H +
Sbjct: 600 GYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNIS 659
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P H+ VDLLGRAG L A I EMP++PTA VWGALL AC+ H N +L AA+
Sbjct: 660 PGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKH 719
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+F+LD SG ++LLA +YA AG+ +D+A+ RK+M++ G+KK P SW+E N VH+F A
Sbjct: 720 LFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKA 779
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HPQ I +K E+ EKI +GYV + E HSEKLA+AF +
Sbjct: 780 EDVSHPQVIAIREKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGI 828
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+S P IHI KN+R+C DCH+ K S V +RE ++RD RFHHF+ G CSC DYW
Sbjct: 829 MSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 177/386 (45%), Gaps = 34/386 (8%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ N ++N YAK G L +A +LF MP +D+ +W ++SGY Q+ Q NA+ +F M
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 86 RLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDM------ 138
+ G PN FT V+K+ GA + Q+ K+ + V ++L+DM
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHE-VALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209
Query: 139 -------------------------YARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
YA+ +D A +F ++ ++ VSWN +I+ ++
Sbjct: 210 MDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKS 269
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL +M +G P +Y+S TA A SLE GK +H VI++ + +V
Sbjct: 270 GRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA 329
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ +V++YAK G ++A++VF+ L R+ VSW ++ G Q+G +V F +M +A
Sbjct: 330 SAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMA 389
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+Q +++ C + + G +L K G + + + + G L A +
Sbjct: 390 VDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA-EL 448
Query: 354 IREMPIEPTAAVWGALLGACRMHKNV 379
I E W ++ A N+
Sbjct: 449 IFNFMAERDIVSWTGMITAYSQVGNI 474
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 170/319 (53%), Gaps = 7/319 (2%)
Query: 21 SAFKN-DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAII 79
S KN I +N++L YAK +D A ++F MP +D+V+W +IS S++ + A+
Sbjct: 218 SRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALD 277
Query: 80 LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMY 139
+ M G++P+ T +S L A A + ++G+Q+H ++ + YV S+++++Y
Sbjct: 278 MVVDMHGKGVRPDSTTYTSSLTAC-ARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELY 336
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
A+ +A +F++L +N VSW LI G + +++ F++M E F+ +
Sbjct: 337 AKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALA 396
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
++ + +T + G +H+ +KSG V N+L+ MYAK G++++AE +FN + +R
Sbjct: 397 TLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAER 456
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGY 318
D+VSW M+T +Q G +F+ M N +T+ +L A G ++G + Y
Sbjct: 457 DIVSWTGMITAYSQVGNIAKAREFFDDMSTR----NVITWNAMLGAYIQHGAEEDGLKMY 512
Query: 319 FALMKKHGVEPEEAHYVTF 337
++ + V P+ YVT
Sbjct: 513 SDMLTEKDVIPDWVTYVTL 531
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 10/250 (4%)
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
S ++ G F +++ A S G+L + + I N +++ YAK
Sbjct: 49 SRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN---VITHNIMMNGYAKL 105
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA-PNQVTFLCV 302
GS+ DA ++F R+ RDV SWN++++G Q G + F M + G + PN TF CV
Sbjct: 106 GSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCV 165
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+ +C G + L+ K + + VD+L R G +D A K +
Sbjct: 166 MKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTI 225
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPH-DSGPHILLANIYASAGRLNDAARARK 421
L+G + H G A IF+ P D ++ + + +GR+ +A
Sbjct: 226 ICRNSMLVGYAKSH-----GVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVV 280
Query: 422 MMKESGVKKE 431
M GV+ +
Sbjct: 281 DMHGKGVRPD 290
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/600 (37%), Positives = 341/600 (56%), Gaps = 36/600 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C + ++ + VH +L + D+ + N +L+ YAKCG + AR+
Sbjct: 122 CAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW 181
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
LFDE P++D +W +ISG ++ +A+ +M + G+
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N +T S+ +G D GRQ+H L + + +V SSL+DMY + ++ A
Sbjct: 242 FNHYTYSTAFVLAGMLLLPD-LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAAS 300
Query: 151 LF---TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F + L +W+ ++AG+ + E+AL F MLREG F+ +SV A A+
Sbjct: 301 VFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACAN 360
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G +EQG+ VH V K +L A + + +VDMYAK G++EDA +F+R +++ W SM
Sbjct: 361 VGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSM 420
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
L A HG G+ + FE+M + PN++T + VL+ACSH GL+ EG+ YF M++ +G
Sbjct: 421 LCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYG 480
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+ P HY VDL GR+GLLD+A FI E I A VW LL ACR+H++ E A+
Sbjct: 481 IVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLAS 540
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
E++ +L+ D+G +++L+NIYA+ + +D R M+E V+K+P SW+ KN VH F
Sbjct: 541 EKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTF 600
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
VA D +HPQ A I+ ++ E++K+IGY + V+ + ++RE L+ HSEKLA+AF
Sbjct: 601 VAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAF 660
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ISTP G+ + I KN+RVC DCH A K+ S REI+VRD RFHHF+D CSC D+W
Sbjct: 661 GIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 37/380 (9%)
Query: 45 EARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKAS 103
+AR +FDE P + WT ISG ++ + + + F++ML G PN F L++V++
Sbjct: 63 DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122
Query: 104 GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-- 161
AG D + G++VH + L+ G +V + +++LDMYA+ Q + A +F A+ ++ V
Sbjct: 123 -AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW 181
Query: 162 -----------------------------SWNALIAGHARKSEGEKALRTFSEMLREGFE 192
SWN +I+G R AL M + G
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
H++YS+ F + G+ +H V+ + + AFV ++L+DMY K G +E A V
Sbjct: 242 FNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASV 301
Query: 253 FNRL--LKRDV-VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
F+ L RD+ +W++M+ G Q+G + + F +MLR G+A ++ T V AC++
Sbjct: 302 FDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANV 361
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
G++++G+ ++K + + VD+ + G L+ A + I + AVW ++
Sbjct: 362 GMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDA-RSIFDRACTKNIAVWTSM 420
Query: 370 LGACRMHKNVELGAYAAERI 389
L + H + ER+
Sbjct: 421 LCSYASHGQGRIAIELFERM 440
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG-F 191
+S+L + R + DA +F ++ W I+G AR+ +R F+EML EG
Sbjct: 49 ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P F ++V A G +E GK VH ++++G L + N ++DMYAK G E A +
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF-EKMLRNGIAPNQVTFLCVLTACSHAG 310
VF + +RD VSWN + C Q G +++ F E LR+ + N + +G
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTII----------SG 218
Query: 311 LLDEGQGYFAL-----MKKHGVEPEEAHYVTFVDLLGRAGLLD 348
L+ G AL M + GV Y T L G L D
Sbjct: 219 LMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPD 261
>gi|449517497|ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/559 (40%), Positives = 337/559 (60%), Gaps = 9/559 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
H+ L F N+ N ++N Y + + A +LFDEMP ++V+WT+L++GY N QP
Sbjct: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
A+ LF +MLR + PN FT ++ +KA ++ + G HA +GY N+ V SS
Sbjct: 107 STALFLFGEMLRSPVVPNDFTFATAIKACSI-LSNLRHGEMFHAHVEIFGYGGNIVVCSS 165
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-P 193
L+DMY + + + A +F ++ KN VSW ++IA +A+ + G++AL+ F E E P
Sbjct: 166 LIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHP 225
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +SV +A AS G L GK +H I G V + LVDMYAK GS++ ++KVF
Sbjct: 226 NPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVF 285
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
NR+ V+ + SM+ A++G G+ +++ FE+M+R G+ PN +T + VL ACSH+GL +
Sbjct: 286 NRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPN 345
Query: 314 EGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP--TAAVWGALL 370
EG Y M +K+G+ PE HY VD+L R G LD+A + M + P A +WGALL
Sbjct: 346 EGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALL 405
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
A R H V++ A A +++ + +G ++ L+N+YASAG + A + R MK +GV K
Sbjct: 406 SASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHK 465
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRA-MIHKKWREISEKIKQIGYVPDSSHVLSYAD-- 487
EP CSW+E K++ ++F A + R + RE+ +K+K GYV L + D
Sbjct: 466 EPGCSWIEIKDSSYIFYAGEITSCARGDEVLCLLRELDQKMKDRGYVRGRKG-LVFVDIE 524
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++ E K+ +HSE+LAL F LIS P G TI I KN+R+C DCH AFK S+++ERE +VR
Sbjct: 525 EEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVR 584
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D NRFHHF++G C+C +W
Sbjct: 585 DINRFHHFKNGCCTCNGFW 603
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 178/372 (47%), Gaps = 20/372 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ + HAH+ + +I + +++++ Y KC + +AR +F+ M K++V+W
Sbjct: 135 CSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSW 194
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T++I+ Y+QN + A+ +F + L + PN + L+SV+ A A G+ +H
Sbjct: 195 TSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISAC-ASLGRLVSGKVMHGAA 253
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G D + V S L+DMYA+ +D + +F + + + + + ++I A+ G K+L
Sbjct: 254 ISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSL 313
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDM 239
+ F EM+R+G +P H + V A + +G +G + + + G + T +VDM
Sbjct: 314 QLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDM 373
Query: 240 YAKSGSIE---DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAP 294
A+ G ++ D K + + W ++L+ HG ++++ + +A
Sbjct: 374 LARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAG 433
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE---------EAHYVTFVDLLGRAG 345
VT V + AG +++ MK+ GV E ++ Y+ + +
Sbjct: 434 AYVTLSNVYAS---AGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSCA 490
Query: 346 LLDRALKFIREM 357
D L +RE+
Sbjct: 491 RGDEVLCLLREL 502
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/567 (40%), Positives = 334/567 (58%), Gaps = 32/567 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +H+ + F ++ + + +++ YAKC + A K+F+EMP +
Sbjct: 20 CTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPTLLLENL 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TAL ++ + SSV A A A + +FG+QVH L
Sbjct: 80 TAL---------------------------DEVSFSSVFSAC-ANAGNLEFGKQVHGVAL 111
Query: 122 KYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K G WN VY+ +SL DMY + +D LF+ +++ V+WN +I + E A
Sbjct: 112 KLGV-WNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDAC 170
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+F M R+G P SYSSV + A+ +L QG +H +I+SG V ++L+ MY
Sbjct: 171 NSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMY 230
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK GS+ DA ++F R+VV W +++ C QHG V FE+MLR GI P+ +TF+
Sbjct: 231 AKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFV 290
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH G ++EG YF +++K HG+ P HY VDLL RAG LDRA +FI MPI
Sbjct: 291 SVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPI 350
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A+VWGALL ACR H N+ +G A ++F+L+P + G ++LL NI G LN+A
Sbjct: 351 KPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEV 410
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+ M+ GV+KEP CSW++ KN+ ++F +D +H + I++ ++ E +K+ GYV ++
Sbjct: 411 RRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAET 470
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
++ A++ +E L HSEK+ALAF L+S P G+ I IKKN+R CGDCH+ KFAS++
Sbjct: 471 EFAINTAEEY-KEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEI 529
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD NRFHHF +G CSCGDYW
Sbjct: 530 FAREIIVRDINRFHHFTNGICSCGDYW 556
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 131/294 (44%), Gaps = 31/294 (10%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G+ PN +T S+VL A T G Q+H+ K+G+ V+V S+L+DMYA+
Sbjct: 1 MRRSGVYPNHYTFSAVLSAC-TDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCC 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT-HFSYSSVF 202
M L+A EK +L E S+SSVF
Sbjct: 60 DM--------------------LMA--------EKVFEEMPTLLLENLTALDEVSFSSVF 91
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+A A+ G+LE GK VH +K G + ++ N+L DMY K G D K+F+ RDVV
Sbjct: 92 SACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVV 151
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
+WN M+ + + F M R G P++ ++ VL +C++ L +G +
Sbjct: 152 TWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQI 211
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ G + + + + G L A + E + W A++ AC+ H
Sbjct: 212 IRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE-DRNVVCWTAIIAACQQH 264
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
M R+G+ PN TF VL+AC+ G+ +L+ KHG E VD+ +
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 347 LDRALKFIREMP---IEPTAAV----WGALLGACRMHKNVELGAYAAERIFELDPHD-SG 398
+ A K EMP +E A+ + ++ AC N+E G +L +
Sbjct: 61 MLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 120
Query: 399 PHILLANIYASAGRLNDAAR 418
+ L+++Y G ND A+
Sbjct: 121 INNSLSDMYGKCGLFNDVAK 140
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 348/572 (60%), Gaps = 10/572 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L+ R++H L DI + N +L+ Y +CG +EAR LF +P + V+W
Sbjct: 334 TGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWN 392
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHAF 119
+I+G SQ Q + A+ LF +M G+ P + T ++L+A + + + GR++H+
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT--ALESKNEV-SWNALIAGHARKSEG 176
+ GY +G++++ MYA +D+A F A+E +++V SWNA+I+ ++ G
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++AL F M G P + +V A A +L +G+ VH H+ SG + FV L
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATAL 572
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
MY + GS+E A ++F ++ ++RDVV +N+M+ +Q+GL ++ F +M + G P+
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ +F+ VL+ACSH GL DEG F M++ +G+ P E HY VD+LGRAG L A + I
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELI 692
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R M ++PT VW LLGACR +++V+ G A + ELDP D +++L+NI A AG+ +
Sbjct: 693 RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWD 752
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
+AA R M+ G++KE SW+E K+ VH FVA D +HP+ I+++ + +I++IG
Sbjct: 753 EAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD+ VL D+ E+E L HSE+LA+A ++S+ T+ + KN+RVC DCH+A K
Sbjct: 813 YVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATK 871
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SK+V +EI+VRDT+RFHHF DG CSCGDYW
Sbjct: 872 FISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 187/380 (49%), Gaps = 16/380 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + R +HA I+ + ++ N +L Y KC L + ++F + V+D +WT +I
Sbjct: 43 RLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ Y+++ Q + AI +F +M + G++ + T +VLKA A D GR +HA+ ++ G
Sbjct: 101 TAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKAC-ARLGDLSQGRSIHAWIVESGL 159
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + LL +Y + A LF +E ++ VSWNA IA +A+ + AL F
Sbjct: 160 KGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQR 218
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M EG P + + AL ++ Q + +H V +SG + V L YA+ G
Sbjct: 219 MQLEGVRPARIT---LVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGH 275
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ A++VF+R +RDVVSWN+ML AQHG F +ML GI+P++VT + T
Sbjct: 276 LYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTG 335
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
CS L G+ + G++ + +D+ R G + A + +P A
Sbjct: 336 CSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC--NAVS 390
Query: 366 WGALLGAC----RMHKNVEL 381
W ++ +M + VEL
Sbjct: 391 WNTMIAGSSQKGQMKRAVEL 410
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 204/440 (46%), Gaps = 26/440 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + R +HA I+ S K + N +L+ Y CGC+ A LF++M +D+V+W
Sbjct: 138 CARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSW 196
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A I+ +Q+ A+ LF +M G++P + TL L + + +H
Sbjct: 197 NAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT----IRQAQAIHFIVR 252
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + V ++L YAR + A +F ++ VSWNA++ +A+ +A
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTG--SLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F+ ML EG P S V ASTG SL G+ +H ++ G +GN L+DM
Sbjct: 313 LFARMLHEGISP-----SKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDM 367
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y + GS E+A +F R + + VSWN+M+ G +Q G K V F++M G+AP + T+
Sbjct: 368 YTRCGSPEEARHLFKR-IPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATY 426
Query: 300 LCVLTACS----HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
L +L A + A + EG+ + + G E A V + G +D A +
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 356 EMPIEPTAAV--WGALLGACRMHKNVELGAYAAERIFELDPHDSGPH----ILLANIYAS 409
+E V W A++ + H + G A +D H P+ + + + A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGH---GKRALGFFRRMDLHGVAPNQITCVAVLDACAG 543
Query: 410 AGRLNDAARARKMMKESGVK 429
A L + ++ SG++
Sbjct: 544 AAALTEGEIVHDHLRHSGME 563
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVT 60
C L E IVH H+ S ++++ + + + Y +CG L+ AR++F+++ V +D+V
Sbjct: 541 CAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVI 600
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ A+I+ YSQN A+ LF +M + G +P++ + SVL A G D+ +
Sbjct: 601 FNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMR 660
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAGHARKSEGEKA 179
YG + + +D+ R + DA L ++ K V W L+ G RK
Sbjct: 661 QSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLL-GACRKYRDVDR 719
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
R + M+RE +P S V + + + GKW A +++
Sbjct: 720 GRLANSMVRE-LDPGDESAYVVLSNILAGA----GKWDEAAEVRT 759
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/601 (38%), Positives = 348/601 (57%), Gaps = 39/601 (6%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILN---AYAKCGCLDEARKLFDEMPVKDMV 59
T K +E + +HA +L + D L+ + L A+ +FD D
Sbjct: 51 TRCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTF 110
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
W +I G+S +D+PE +++L+ +ML N +T S+LKA S A ++ Q+HA
Sbjct: 111 LWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEET--TQIHA 168
Query: 119 FCLKYGYDWNVYVGSSLLDMYAR----------FD---------------------QMDD 147
K GY+ +VY +SL++ YA FD +MD
Sbjct: 169 QITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDI 228
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + KN +SW +I+G+ + ++AL+ F EM EP + S ++ +A A
Sbjct: 229 ALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQ 288
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+LEQGKW+H+++ K+ ++ + +G L+DMYAK G + +A +VF + ++ V +W ++
Sbjct: 289 LGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTAL 348
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
++G A HG G+ + F +M + GI PN +TF VLTACS+ GL++EG+ F M++ +
Sbjct: 349 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYN 408
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
++P HY VDLL RAGLLD A +FI+EMP++P A +WGALL ACR+HKN+ELG
Sbjct: 409 LKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIG 468
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
E + +DP+ G ++ ANI+A + + AA R++MKE GV K P CS + + H F
Sbjct: 469 EILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEF 528
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPD-SSHVLSYADQQEREAKLQVHSEKLALA 505
+A D +HP+ I KW+ + K+++ GYVP+ +L D ERE + HSEKLA+
Sbjct: 529 LAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAIT 588
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ LI T PG+TI I KN+RVC DCH K SK+ +R+I++RD RFHHFRDG CSCGDY
Sbjct: 589 YGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDY 648
Query: 566 W 566
W
Sbjct: 649 W 649
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 156/308 (50%), Gaps = 38/308 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L+E +HA I ++ND+ N+++N+YA G A LFD +P D V+W
Sbjct: 154 CSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSW 213
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-------------------------------LK 90
++I GY++ + + A+ LF +M+ ++
Sbjct: 214 NSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVE 273
Query: 91 PNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+ +L++ L A GA + G+ +H++ K + +G L+DMYA+ M +A
Sbjct: 274 PDNVSLANALSACAQLGALEQ--GKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEAL 331
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F ++ K+ +W ALI+G+A G +A+ F EM + G +P ++++V TA + TG
Sbjct: 332 EVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTG 391
Query: 210 SLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNS 266
+E+GK + ++ + + G +VD+ +++G +++A++ + LK + V W +
Sbjct: 392 LVEEGKLIFYNMERDYNLKPTIEHYG-CVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGA 450
Query: 267 MLTGCAQH 274
+L C H
Sbjct: 451 LLKACRIH 458
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 328/590 (55%), Gaps = 34/590 (5%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A+ +HA I+ + + NT+LNAY KCG + +A +LFD +P +D V W +L++ +
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
+++P A+ + +L G P+ F +S++KA + G K G+QVHA + +
Sbjct: 82 SNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE-------------- 175
V SSL+DMYA+F D +F ++ S N +SW +I+G+AR
Sbjct: 142 VVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYR 201
Query: 176 -----------------GEKALRTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWV 217
G A F EM EG T SSV A A+ E GK +
Sbjct: 202 NLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQM 261
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
H VI G + F+ N L+DMYAK + A+ +F + ++DVVSW S++ G AQHG
Sbjct: 262 HGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQA 321
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVT 336
+ + +++M+ G+ PN+VTF+ ++ ACSHAGL+ +G+ F +++ HG+ P HY
Sbjct: 322 EEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTC 381
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
+DL R+G LD A IR MP+ P W ALL +C+ H N ++ A+ + L P D
Sbjct: 382 LLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPED 441
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
+ILL+NIYA AG D ++ RK+M KK P S ++ H+F A + +HP R
Sbjct: 442 PSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMR 501
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGST 516
I RE+ E++++ GY PD+S VL DQQE+E +L HSE+LA+A+ L+ PG+
Sbjct: 502 DEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTV 561
Query: 517 IHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+RVCGDCH+ K S + REI VRD R+HHF+DG CSC D+W
Sbjct: 562 IRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 163/322 (50%), Gaps = 35/322 (10%)
Query: 2 CTHLKKL--KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C +L L K+ + VHA S F +D +++++++ YAK G D R +FD + + +
Sbjct: 114 CANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSI 173
Query: 60 TWTALISGYSQNDQPENAIILFSQ---------------MLRLGLKPNQFTLSSVLKASG 104
+WT +ISGY+++ + A LF Q +++ G + F L ++ G
Sbjct: 174 SWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEG 233
Query: 105 AGATDD----------------KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
TD + G+Q+H + GY+ +++ ++L+DMYA+ + A
Sbjct: 234 ISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAA 293
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
++F + K+ VSW ++I G A+ + E+AL + EM+ G +P ++ + A +
Sbjct: 294 KYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHA 353
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNS 266
G + +G+ + +++ G + T L+D++++SG +++AE + + + D +W +
Sbjct: 354 GLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAA 413
Query: 267 MLTGCAQHGLGKATVRWFEKML 288
+L+ C +HG + VR + +L
Sbjct: 414 LLSSCKRHGNTQMAVRIADHLL 435
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/572 (40%), Positives = 344/572 (60%), Gaps = 16/572 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG---CLDEARKLFDEMPVKDM 58
CT L ++ + +H+ L +D + +++ YAK ++ ARK+F MP ++
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315
Query: 59 VTWTALISGYSQNDQPENAII-LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++WTALISGY Q+ EN ++ LF +ML ++PN T S++LKA A +D GRQ+H
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKAC-ANLSDQDSGRQIH 374
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
A LK VG++L+ MYA M++A F L N +S + + E E
Sbjct: 375 AHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV-------ETE 427
Query: 178 KALRTFSEMLREGFEP--THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+ + S + EG + + F+++S+ +A AS G L +G+ +HA +K+G + + N+
Sbjct: 428 RNNASCSSKI-EGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNS 486
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV MYA+ G +EDA + F+ + +V+SW S+++G A+HG K + F M+ G+ PN
Sbjct: 487 LVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPN 546
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
VT++ VL+ACSH GL+ EG+ +F M+K HG+ P HY VDLL R+GL++ A +FI
Sbjct: 547 DVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFI 606
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
EMP + A VW LL ACR + N E+G AA + L+P D P++LL+N+YA AG +
Sbjct: 607 NEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWD 666
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
+ AR R +M++ + KE SW++ N +H F A D +HP I+ K + +IK IG
Sbjct: 667 EVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIG 726
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD+S VL ++ +E L HSEK+A+AF LI+T + I KN+RVC DCHSA K
Sbjct: 727 YVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIK 786
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ SK REII+RD+NRFH +DG CSCG+YW
Sbjct: 787 YISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 220/461 (47%), Gaps = 44/461 (9%)
Query: 8 LKEARIVHAHILGS-AFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALI 65
L+ R +H +L S D + N++L Y+KCG ++ AR++FD+M V+D+V+WTA+
Sbjct: 56 LRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMA 115
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
S ++N ++ L +ML LGL+PN FTL + +A G V F LK G+
Sbjct: 116 SCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGF 175
Query: 126 DW--NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
W +V VG +L+DM+AR + A +F L + V W LI + + K + F
Sbjct: 176 -WGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELF 234
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK- 242
ML +GFEP +S SS+ +A GS+ G+ +H+ ++ G + V LVDMYAK
Sbjct: 235 LHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKL 294
Query: 243 --SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR-WFEKMLRNGIAPNQVTF 299
S+E A KVF + + +V+SW ++++G Q G+ + V F +ML I PN +T+
Sbjct: 295 KMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITY 354
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE--- 356
+L AC++ D G+ A + K + V + +G ++ A K +
Sbjct: 355 SNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYE 414
Query: 357 ---MPIEP----------------------TAAVWGALLGACR----MHKNVELGAYAAE 387
+ + P + + +LL A + K +L A + +
Sbjct: 415 TNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMK 474
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
F D G L ++YA G L DA RA MK+ V
Sbjct: 475 AGFR---SDQGISNSLVSMYARCGYLEDACRAFDEMKDHNV 512
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/570 (38%), Positives = 354/570 (62%), Gaps = 7/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L R +H D+++ N +L YA+ ++E +K+F +MP D V+W
Sbjct: 567 CSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSW 626
Query: 62 TALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ I ++ + A+ F +M++ G +PN+ T ++L A + + G Q+HA
Sbjct: 627 NSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLG-LGHQIHALI 685
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
LKY + + ++LL Y + +QM+D +F+ + E ++EVSWN++I+G+ KA
Sbjct: 686 LKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKA 745
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M++ G + F++++V +A AS +LE+G VHA +++ + VG+ LVDM
Sbjct: 746 MDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDM 805
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+ A + F + R++ SWNSM++G A+HG G+ ++ F +M ++G +P+ VTF
Sbjct: 806 YAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTF 865
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACSH GL+DEG +F M + +G+ P H+ VDLLGRAG + + FI+ MP
Sbjct: 866 VGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMP 925
Query: 359 IEPTAAVWGALLGA-CRMH-KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
++P +W +LGA CR + +N ELG AA+ + EL+P ++ ++LL+N++A+ G D
Sbjct: 926 MDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDV 985
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
AR M+++ VKK+ CSWV K+ VH+FVA D HP++ I++K +E+ KI+ GYV
Sbjct: 986 VEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYV 1045
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P++ + L + + +E L HSEKLA+AF L + I I KN+RVCGDCH+AFK+
Sbjct: 1046 PETKYALYDLELENKEELLSYHSEKLAIAFVL-TRKSELPIRIMKNLRVCGDCHTAFKYI 1104
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+V R+II+RD+NRFHHF G CSCGDYW
Sbjct: 1105 SKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 202/379 (53%), Gaps = 21/379 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L +A +H + + F +D+ NT++N Y + G L ARKLFDEMP K++V+W+ LISG
Sbjct: 156 LYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG 215
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYD 126
Y+QN P+ A LF ++ GL PN F + S L+A G+T K G Q+HAF K
Sbjct: 216 YTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCV 275
Query: 127 WNVYVGSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++ + + L+ MY+ +DDA +F ++ +N V+WN++I+ + R+ + A + FS
Sbjct: 276 SDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSV 335
Query: 186 MLREGFE----PTHFSYSSVFTALASTGS-----LEQGKWVHAHVIKSGGQLVAFVGNTL 236
M EG E P ++ S+ TA S LEQ + + KSG +VG+ L
Sbjct: 336 MQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQ---MLTRIEKSGFLRDLYVGSAL 392
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V+ +A+ G ++ A+ +F ++ R+ V+ N ++ G A+ G+ + F++M ++ + N
Sbjct: 393 VNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINS 451
Query: 297 VTFLCVLTACSHAGLLDE----GQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRAL 351
+ + +L+ + L E GQ A + + G V+ + V++ G+ +D A
Sbjct: 452 ESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNAC 511
Query: 352 KFIREMPIEPTAAVWGALL 370
+ MP + T + W +++
Sbjct: 512 SVFQLMPSKDTVS-WNSMI 529
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 194/382 (50%), Gaps = 10/382 (2%)
Query: 21 SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIIL 80
S F D+ + + ++N +A+ G +D A+ +F +M ++ VT L+ G ++ Q E A +
Sbjct: 380 SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKV 439
Query: 81 FSQM---LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLL 136
F +M + + + LS+ + S K G++VHA+ + G D + +G++L+
Sbjct: 440 FKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRK-GQEVHAYLFRSGLVDARISIGNALV 498
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
+MY + +D+A +F + SK+ VSWN++I+G E+A+ F M R G P++F
Sbjct: 499 NMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 558
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
S S ++ +S G L G+ +H K G L V N L+ +YA++ SI + +KVF ++
Sbjct: 559 SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 618
Query: 257 LKRDVVSWNSMLTGCAQHGLGK-ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D VSWNS + A++ +++F +M++ G PN+VTF+ +L A S +L G
Sbjct: 619 PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 678
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACR- 374
AL+ K+ V + A + G+ ++ M W +++
Sbjct: 679 HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 738
Query: 375 ---MHKNVELGAYAAERIFELD 393
+HK ++L +R +LD
Sbjct: 739 SGILHKAMDLVWPMMQRGQKLD 760
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 195 HFSYS--------SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
H+++S S F ++ SL +H + K+G F NTL+++Y + G++
Sbjct: 132 HYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNL 191
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A K+F+ + ++++VSW+ +++G Q+ + F+ ++ +G+ PN L AC
Sbjct: 192 VSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRAC 251
Query: 307 SHAG 310
G
Sbjct: 252 QQCG 255
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 339/561 (60%), Gaps = 4/561 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + VHA+ + + +++ + NT+++ YAKC C+ F+ M KD+++WT +I+G
Sbjct: 365 LLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAG 424
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+QN+ AI LF ++ G+ + + SVL+A +G F R++H + K
Sbjct: 425 YAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC-SGLKSRNFIREIHGYVFKRDLA- 482
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++ + ++++++Y D A F ++ SK+ VSW ++I +AL F +
Sbjct: 483 DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ +P + S +A A+ SL++GK +H +I+ G L + ++LVDMYA G++E
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
++ K+F+ + +RD++ W SM+ HG G + F+KM + P+ +TFL +L ACS
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACS 662
Query: 308 HAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+ EG+ +F +MK + +EP HY VDLL R+ L+ A +F+R MPI+P++ VW
Sbjct: 663 HSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVW 722
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
ALLGAC +H N ELG AA+ + + D +SG + L++NI+A+ GR ND R MK +
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGN 782
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSHVLSY 485
G+KK P CSW+E N +H F+A D +HPQ I+ K + ++ + K+ GY+ + V
Sbjct: 783 GLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHN 842
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++E+ L HSE+LAL + L+ TP G++I I KN+R+C DCH+ FK AS+V +R ++
Sbjct: 843 VSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALV 902
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD NRFHHF G CSCGD+W
Sbjct: 903 VRDANRFHHFERGLCSCGDFW 923
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 146/588 (24%), Positives = 260/588 (44%), Gaps = 68/588 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +K L + + +HA +L S +A + +L+ Y KCG L +A K+FDEM + + TW
Sbjct: 56 CVAVKALPQGQQLHARLLKSHLSAFLATK--LLHMYEKCGSLKDAVKVFDEMTERTIFTW 113
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A++ + + + AI L+ +M LG+ + T SVLKA GA + + G ++H +
Sbjct: 114 NAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGA-LGESRLGAEIHGVAV 172
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA--LESKNEVSWNALIAGHARKSEGEKA 179
K G+ V+V ++L+ MY + + A LF +E ++ VSWN++I+ H + + +A
Sbjct: 173 KCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEA 232
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F M G +++ + + ++ G +H +KS +V N L+ M
Sbjct: 233 LSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAM 292
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G +EDAE+VF +L RD VSWN++L+G Q+ L + + +F M + P+QV+
Sbjct: 293 YAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSV 352
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD----------- 348
L ++ A +G L G+ A ++G++ T +D+ + +
Sbjct: 353 LNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHE 412
Query: 349 --------------------RALKFIRE-----MPIEPTAAVWGALLGACRMHKNVELGA 383
A+ R+ M ++P + G++L AC K+
Sbjct: 413 KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPM--MIGSVLRACSGLKSRNFIR 470
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN-A 442
+F+ D D + N+Y G + A RA + ++ + SW
Sbjct: 471 EIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFE-----SIRSKDIVSWTSMITCC 525
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL----QVH 498
VH + P A+ E+ +KQ PDS ++S + L ++H
Sbjct: 526 VH------NGLPVEAL------ELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIH 573
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ F L S + + CG ++ K V +R++I+
Sbjct: 574 GFLIRKGFFLEGPIASSLVDMYA---CCGTVENSRKMFHSVKQRDLIL 618
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
++S + + +L QG+ +HA ++KS L AF+ L+ MY K GS++DA KVF+ +
Sbjct: 48 AHSLLLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEM 105
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+R + +WN+M+ G + +++M G+A + TF VL AC G
Sbjct: 106 TERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG 159
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L LK+ + +H ++ F + + +++++ YA CG ++ +RK+F + +D++ WT+
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTS 621
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAFC 120
+I+ + AI LF +M + P+ T ++L A SG +F
Sbjct: 622 MINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFE-----I 676
Query: 121 LKYGYD---WNVYVGSSLLDMYARFDQMDDAWFLFTALESK--NEVSWNALIAG---HAR 172
+KYGY W + + ++D+ +R + +++A+ ++ K +EV W AL+ H+
Sbjct: 677 MKYGYQLEPWPEHY-ACMVDLLSRSNSLEEAYQFVRSMPIKPSSEV-WCALLGACHIHSN 734
Query: 173 KSEGEKALR 181
K GE A +
Sbjct: 735 KELGELAAK 743
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 344/600 (57%), Gaps = 38/600 (6%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDM 58
+C+++++L++ +H +L + D + +L A G L AR +FD + +
Sbjct: 27 RCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W +I GYS + +PE A++L+ ML + N +T +LKA + + ++ +Q+HA
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEE-TQQIHA 142
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE- 177
+K G+ +Y +SLL++Y++ + A LF ++ ++ VSWN++I G+ + E E
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEM 202
Query: 178 ------------------------------KALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+AL F M G + + + S A A
Sbjct: 203 AYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G L+QGKW+HA++ K ++ +G L+DMYAK G +E+A +VF ++ ++ V W +M
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
++G A HG G+ + WF KM G+ PNQ+TF +LTACSHAGL+ E + F M++ HG
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+P HY VDLLGRAGLL A + I MP++P AA+WGALL AC +H N+ELG
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIG 442
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+ + ++DP G +I LA+I+A+AG N AAR R+ MKE GV K P CS + H F
Sbjct: 443 KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEF 502
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
+A D++HPQ I +I E++++ GY P +L + +E+E + HSEKLA+ F
Sbjct: 503 LAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTF 562
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG TI I KN+RVC DCH+ K SKV REI++RD RFH F+DG C+CGDYW
Sbjct: 563 GLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/551 (40%), Positives = 322/551 (58%), Gaps = 3/551 (0%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+ G K + N ++N Y + G L ARK+FDEMP + + TW A+I+G Q + E
Sbjct: 14 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 73
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ LF +M LG P+++TL SV S AG G+Q+H + +KYG + ++ V SSL
Sbjct: 74 LSLFREMHGLGFSPDEYTLGSVFSGS-AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 132
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY R ++ D + ++ +N V+WN LI G+A+ E L + M G P +
Sbjct: 133 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 192
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ +V ++ + QG+ +HA IK G V V ++L+ MY+K G + DA K F+
Sbjct: 193 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 252
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D V W+SM++ HG G + F M + + N+V FL +L ACSH+GL D+G
Sbjct: 253 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 312
Query: 317 GYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
F +M +K+G +P HY VDLLGRAG LD+A IR MPI+ +W LL AC +
Sbjct: 313 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 372
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
HKN E+ + I ++DP+DS ++LLAN++ASA R D + RK M++ VKKE S
Sbjct: 373 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 432
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W E K VH F D + + I+ +E++ ++K GY PD++ VL D++E+E+ L
Sbjct: 433 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDL 492
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AFAL+ P G+ I I KN+RVC DCH AFK+ S + REI +RD +RFHHF
Sbjct: 493 VQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHF 552
Query: 556 RDGFCSCGDYW 566
+G CSCGDYW
Sbjct: 553 INGKCSCGDYW 563
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 160/308 (51%), Gaps = 7/308 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + + +H + + + D+ + +++ + Y + G L + + MPV+++V W L
Sbjct: 102 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 161
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G +QN PE + L+ M G +PN+ T +VL + A + G+Q+HA +K G
Sbjct: 162 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ-GQQIHAEAIKIG 220
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
V V SSL+ MY++ + DA F+ E ++EV W+++I+ + +G++A+ F+
Sbjct: 221 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 280
Query: 185 EMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAK 242
M + E ++ ++ A + +G ++G + +++ G T +VD+ +
Sbjct: 281 TMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 340
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+G ++ AE + + +K D+V W ++L+ C H + R F+++L+ I PN +
Sbjct: 341 AGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACY 397
Query: 302 VLTACSHA 309
VL A HA
Sbjct: 398 VLLANVHA 405
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + +HA + + +A+ +++++ Y+KCGCL +A K F E +D V W
Sbjct: 200 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 259
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+++IS Y + Q + AI LF+ M + ++ N+ ++L A DK
Sbjct: 260 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 319
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
KYG+ + + ++D+ R +D A + ++ K + V W L++ E A
Sbjct: 320 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 379
Query: 180 LRTFSEMLR 188
R F E+L+
Sbjct: 380 QRVFKEILQ 388
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 337/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R+VH + + + F + ++ N +L+ Y+ C K+F M K++V+W
Sbjct: 307 CAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSW 366
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+ Y++ + LF +M G +P+ F ++S L A AG K G+ VH + +
Sbjct: 367 TAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAF-AGNELLKHGKSVHGYAI 425
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + V ++L++MY + M++A +F + SK+ +SWN LI G++R + +A
Sbjct: 426 RNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFS 485
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+EML + P + + + A AS SLE+G+ +HA+ ++ G FV N L+DMY
Sbjct: 486 LFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYV 544
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A ++F+RL ++++SW M+ G HG G+ + FE+M +GIAP+ +F
Sbjct: 545 KCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSA 604
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACSH+GL DEG +F A+ K+H +EP HY VDLL G L A +FI MPIE
Sbjct: 605 ILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIE 664
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +++W +LL CR+H+NV+L AER+FEL+P ++G ++LLANIYA A R + +
Sbjct: 665 PDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLK 724
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ G+++ CSW+E K VH+F+A++ HPQ I + E+++++++ G+ P
Sbjct: 725 NKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKK 784
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L AD L HS KLA+AF +++ G I + KN RVC CH A KF SK+
Sbjct: 785 YALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMC 844
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD+NRFHHF G CSC YW
Sbjct: 845 SREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 15/428 (3%)
Query: 2 CTHLKKLKEAR----IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VK 56
C+ ++ L+ + +V A LG +++ Q +L Y KCG L+ AR++FDEMP V
Sbjct: 101 CSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVL-MYLKCGDLENARRVFDEMPQVS 159
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ 115
D+ WTAL+SGY++ ++LF +M G++P+ +T+S VLK +G G+ +D G
Sbjct: 160 DVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIED--GEV 217
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
VH K G+ VG++L+ YA+ ++ DA +F + ++ +SWN++I+G
Sbjct: 218 VHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGL 277
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+KA+ F M EG E + SV A A L G+ VH + +K+G + N
Sbjct: 278 YDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANV 337
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+DMY+ K+F +++++VVSW +M+T + GL F++M G P+
Sbjct: 338 LLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPD 397
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
L A + LL G+ ++G+E A +++ + G ++ A K I
Sbjct: 398 IFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEA-KLIF 456
Query: 356 EMPIEPTAAVWGALLGA-CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
+ + W L+G R + E + E + +L P+ + + I +A L+
Sbjct: 457 DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPN----AVTMTCILPAAASLS 512
Query: 415 DAARARKM 422
R R+M
Sbjct: 513 SLERGREM 520
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 338/567 (59%), Gaps = 11/567 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++E + +H L F +D+ +Q +++N Y+KCG +D ARK+FD M KD+V W
Sbjct: 122 CARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLW 181
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI GY++ + + A+ LF +M + + F+ + ++ + +
Sbjct: 182 NSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQMPC 237
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ WN ++++ Y + D A LF + + V+WN +IAG+ + A++
Sbjct: 238 RNLVSWN-----AMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVK 292
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML+ G P+H + SV +A++ L +G+W+H+++ K+G +L +G +L++MYA
Sbjct: 293 MFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYA 352
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IE A VF + K+ V W +++ G HG+ + F +M + G+ PN + F+
Sbjct: 353 KCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIG 412
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC+HAGL+D+G+ YF +M ++ +EP HY VD+L RAG L+ A I MPI
Sbjct: 413 VLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPIS 472
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W +LLG R H +++G YAA+R+ E+ P G +ILL+N+YA++G + R
Sbjct: 473 PNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVR 532
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MM + G +K+P CS VE K +H F+ D +HPQ I+ K E+ EK+K +G+VPD++
Sbjct: 533 EMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTT 592
Query: 481 HV-LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V L ++E+EA+L+ HSE+LA+AF LI+ PG I I KN+RVC DCHS K SK+
Sbjct: 593 QVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKI 652
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD RFHHF++G CSC DYW
Sbjct: 653 YSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 212/432 (49%), Gaps = 23/432 (5%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDMVTWTALIS 66
+E +HA L +A N + + +L Y+ K L AR +FD + + ++ W +I
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 86
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGY 125
Y +N + I+LF +++ L P+ FTL V+K G + G+Q+H LK G+
Sbjct: 87 CYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQE--GKQIHGLALKIGF 143
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+V+V SL++MY++ ++D A +F + K+ V WN+LI G+AR E + AL+ F E
Sbjct: 144 GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEE 203
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M E FS++ + L+ G +E + + + LV++ N +++ Y KSG
Sbjct: 204 MP----ERDAFSWTVLVDGLSKCGKVESARKLFDQM--PCRNLVSW--NAMINGYMKSGD 255
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ A ++F ++ D+V+WN M+ G +G V+ F ML+ G P+ T + VL+A
Sbjct: 256 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 315
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
S +L +G+ + M+K+G E + + +++ + G ++ AL R + +
Sbjct: 316 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-KKKVGH 374
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILL----ANIYASAGRLNDAARARK 421
W A++ +H + +A E+ P+ ++ N AG ++D +
Sbjct: 375 WTAIIVGLGIHG---MANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFD 431
Query: 422 MMKESGVKKEPA 433
MM K EP
Sbjct: 432 MMMNE-YKIEPT 442
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/551 (40%), Positives = 322/551 (58%), Gaps = 3/551 (0%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+ G K + N ++N Y + G L ARK+FDEMP + + TW A+I+G Q + E
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ LF +M LG P+++TL SV S AG G+Q+H + +KYG + ++ V SSL
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGS-AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY R ++ D + ++ +N V+WN LI G+A+ E L + M G P +
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ +V ++ + QG+ +HA IK G V V ++L+ MY+K G + DA K F+
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D V W+SM++ HG G + F M + + N+V FL +L ACSH+GL D+G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 317 GYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
F +M +K+G +P HY VDLLGRAG LD+A IR MPI+ +W LL AC +
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
HKN E+ + I ++DP+DS ++LLAN++ASA R D + RK M++ VKKE S
Sbjct: 375 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 434
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W E K VH F D + + I+ +E++ ++K GY PD++ VL D++E+E+ L
Sbjct: 435 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDL 494
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AFAL+ P G+ I I KN+RVC DCH AFK+ S + REI +RD +RFHHF
Sbjct: 495 VQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHF 554
Query: 556 RDGFCSCGDYW 566
+G CSCGDYW
Sbjct: 555 INGKCSCGDYW 565
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 160/308 (51%), Gaps = 7/308 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + + +H + + + D+ + +++ + Y + G L + + MPV+++V W L
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G +QN PE + L+ M G +PN+ T +VL + A + G+Q+HA +K G
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ-GQQIHAEAIKIG 222
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
V V SSL+ MY++ + DA F+ E ++EV W+++I+ + +G++A+ F+
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 282
Query: 185 EMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAK 242
M + E ++ ++ A + +G ++G + +++ G T +VD+ +
Sbjct: 283 TMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 342
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+G ++ AE + + +K D+V W ++L+ C H + R F+++L+ I PN +
Sbjct: 343 AGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACY 399
Query: 302 VLTACSHA 309
VL A HA
Sbjct: 400 VLLANVHA 407
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + +HA + + +A+ +++++ Y+KCGCL +A K F E +D V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+++IS Y + Q + AI LF+ M + ++ N+ ++L A DK
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
KYG+ + + ++D+ R +D A + ++ K + V W L++ E A
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 381
Query: 180 LRTFSEMLR 188
R F E+L+
Sbjct: 382 QRVFKEILQ 390
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 336/566 (59%), Gaps = 42/566 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + ++E R +H H++ +D+ +++ ++ YA G L++ARK+F D+V W
Sbjct: 142 CSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGE-SDVVCW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY + E A LF+QM +K G+
Sbjct: 201 NTMIDGYLKCGVLEAAKGLFAQM--------------PVKNIGS---------------- 230
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
WNV +++ A+ + DA LF + ++E+SW++++ G+ ++AL
Sbjct: 231 -----WNV-----MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALE 280
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M RE P F SSV A ++ G+++QG+WVHA++ ++ +L A +G L+DMYA
Sbjct: 281 IFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYA 340
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ +VF + +R++ +WN+M+ G A HG + + F K+ + PN +T +
Sbjct: 341 KCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVG 400
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTAC+HAG +D+G F M++ +GV+PE HY VDLLGR+GL A I MP++
Sbjct: 401 VLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK 460
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AAVWGALLGACR+H N +L + + EL+P +SG ++LL+NIYA GR +D ++ R
Sbjct: 461 PNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIR 520
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK+ G+K P S V+ VH F D +HPQ I++K + I E+++ G+ PD+S
Sbjct: 521 KLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTS 580
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++E+E + HSEKLA+AF LI+T PG IHI KN+RVC DCHSA K S++
Sbjct: 581 QVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIF 640
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REIIVRD R+HHF++G CSC D+W
Sbjct: 641 DREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 144/336 (42%), Gaps = 65/336 (19%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--FDQMDDAWFLFTALESKNEVSWNA 165
T ++ Q+H L+ G+ + YV +LL YA F D A +F+++ + N WN
Sbjct: 44 TSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNI 103
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+I G ++ KA+ + M+ + P F+Y ++F A + ++++G+ +H HV+K G
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162
Query: 226 ------------------------------GQLVAFVGNTLVDMY--------------- 240
G+ NT++D Y
Sbjct: 163 IGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222
Query: 241 ----------------AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
AK G++ DA K+F+ + +RD +SW+SM+ G G K + F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
++M R P + VL ACS+ G +D+G+ A +K++ ++ + +D+ +
Sbjct: 283 QQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC 342
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
G LD + EM E W A++G +H E
Sbjct: 343 GRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 334/572 (58%), Gaps = 26/572 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN---AYAKCGCLDEARKLFDEMPVKD 57
KCT LK+LK+ + A+ + + ++N+ + +N + ++ A +LFD++ +
Sbjct: 35 KCTTLKELKQ---IQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPN 91
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+V + + GY++ + P I F + LRL S +KA G +Q+H
Sbjct: 92 IVLFNTMARGYARLNDPLRMITHFRRCLRL---------VSKVKALAEG-------KQLH 135
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
F +K G N+YV +L++MY +D + +F ++ V++NA+I AR +
Sbjct: 136 CFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRAN 195
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+AL F E+ G +PT + V ++ A GSL+ G+W+H +V K G V TL+
Sbjct: 196 EALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLI 255
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
DMYAK GS++DA VF + KRD +W++++ A HG G + +M + + P+++
Sbjct: 256 DMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEI 315
Query: 298 TFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TFL +L ACSH GL++EG YF + ++G+ P HY VDLLGRAG LD A KFI E
Sbjct: 316 TFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDE 375
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+PI+PT +W LL AC H NVE+G ERIFELD G +++ +N+ A G+ +D
Sbjct: 376 LPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDV 435
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
RK M + G K P CS +E N VH F A + H +H+ E+ +++K GYV
Sbjct: 436 NHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYV 495
Query: 477 PDSSHVLSYAD--QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
PD+S V YAD +E+E L+ HSEKLA+ F L++TPPG+TI + KN+RVCGDCH+A K
Sbjct: 496 PDTSLVF-YADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAK 554
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F S + R+II+RD RFHHF+DG CSCGDYW
Sbjct: 555 FISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/547 (41%), Positives = 336/547 (61%), Gaps = 12/547 (2%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ ++ YAK L+ AR+ FD MP + +V+W A++SGY+QN E A+ LF +
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 250
Query: 84 MLRLGLKPNQFTLSSVLKAS---GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
M+ G++P++ T +V+ A G R +H ++ N +V ++LLDMYA
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL----NCFVRTALLDMYA 306
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYS 199
+F +D A LF + +N V+WN++IAG+A+ + A+ F EM+ + P +
Sbjct: 307 KFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMV 366
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
SV +A G+LE G WV + ++ +L N ++ MY++ GS+EDA++VF + R
Sbjct: 367 SVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR 426
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
DVVS+N++++G A HG G + M GI P++VTF+ VLTACSHAGLL+EG+ F
Sbjct: 427 DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF 486
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
+K +P HY VDLLGR G L+ A + + MP+EP A V+G+LL A R+HK V
Sbjct: 487 ESIK----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 542
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
ELG AA ++FEL+P +SG ILL+NIYASAGR D R R+ MK+ GVKK SWVE
Sbjct: 543 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 602
Query: 440 KNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
+H F+ D +H + I++ E+ +K+++ GY+ D S VL +++E+E + HS
Sbjct: 603 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHS 662
Query: 500 EKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
EKLA+ +AL+ + G+ I + KN+RVC DCH+A K SK+ R IIVRD NRFH F DG
Sbjct: 663 EKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGL 722
Query: 560 CSCGDYW 566
CSC DYW
Sbjct: 723 CSCKDYW 729
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 174/374 (46%), Gaps = 71/374 (18%)
Query: 49 LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
LF+ ++ +T+++ YS ++++ QM G++P+ F ++K++G G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-- 113
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQMDD----------- 147
G HA LK G+ + +V ++++DMYAR FD++ D
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 148 ------------AWFLFTALESKN-------------------------------EVSWN 164
A +LF + +N VSWN
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
A+++G+A+ E+ALR F EM+ G EP ++ +V +A +S G + + +
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
QL FV L+DMYAK G ++ A K+FN + R+VV+WNSM+ G AQ+G + F
Sbjct: 290 RIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 349
Query: 285 EKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
++M+ + P++VT + V++AC H G L+ G + ++ ++ + + + + R
Sbjct: 350 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 409
Query: 344 AGLLDRALKFIREM 357
G ++ A + +EM
Sbjct: 410 CGSMEDAKRVFQEM 423
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF + + N + +++ ++ + K + + +M G P F Y + A TG
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYP-ILIKSAGTG 113
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSM 267
G HAHV+K G AFV N ++DMYA+ G I A KVF+ + +R V WN+M
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
++G + + +W ++ N +T+ ++T + L+ + YF M + V
Sbjct: 170 VSGYWKWE-SEGQAQWLFDVMPE---RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV 225
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGAC 373
A + + GL + AL+ EM IEP W ++ AC
Sbjct: 226 VSWNAMLSGY----AQNGLAEEALRLFDEMVNAGIEPDETTWVTVISAC 270
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ V + + K I+ N ++ Y++CG +++A+++F EM +D+V++
Sbjct: 372 CGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSY 431
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
LISG++ + AI L S M G++P++ T VL A S AG ++ GR+V
Sbjct: 432 NTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEE--GRKVFESI 489
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA 148
D + ++D+ R +++DA
Sbjct: 490 KDPAIDHY----ACMVDLLGRVGELEDA 513
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/576 (40%), Positives = 332/576 (57%), Gaps = 13/576 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-----LDEARKLFDEMP-V 55
CT L+ L + V A G + A +L + G L AR++FD +P
Sbjct: 38 CTSLRALAQLHAV-AVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHP 96
Query: 56 KDMVTWTALISGYSQNDQ----PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK 111
D+V + L+ GY++ E A +F +M+ G+ P+ +T S+LKA A A +
Sbjct: 97 GDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKAC-ASARAGE 155
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
GRQ H +K G + YV +L++MYA + A +F ++ + VS+NA+I
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASV 215
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
R S +AL F EM +G +PT + SV +A A G+LE G+W+H ++ K +
Sbjct: 216 RSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVK 275
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
V L+DMYAK GS+EDA VF + RD +W+ M+ A HG G+ + FE+M + G
Sbjct: 276 VNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQG 335
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P+ VTFL VL ACSH+G++ EG YF M+++G+ HY DLL R+G L+RA
Sbjct: 336 MKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAY 395
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
KFI E+PI+PTA +W LL AC H +V++G ERI ELD G +++ +N+ A+ G
Sbjct: 396 KFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTG 455
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
R + RK+M E GV K P CS +E N VH F A D +HP + E+ E++K
Sbjct: 456 RWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLK 515
Query: 472 QIGYVPDSSHVLSY-ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+GYVP++SHV ++E+ L+ HSEKLA++F L++T PG+T+ I KN+RVC DCH
Sbjct: 516 LVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCH 575
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S K S V R II+RD NRFHHF DG CSCGDYW
Sbjct: 576 SMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 334/563 (59%), Gaps = 4/563 (0%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K K+ + +HA +L + F ++ +L G + AR++FDEM + W L
Sbjct: 23 KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY +N P +++L+ +M LG++P++FT V+KA + D G +HA +KYG+
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAI-SQLGDFSCGFALHAHVVKYGFG 141
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
V + L+ MY +F ++ A FLF +++ K+ V+WNA +A + AL F++M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ + F+ S+ +A GSLE G+ ++ K V N +DM+ K G+
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E A +F + +R+VVSW++M+ G A +G + + F M G+ PN VTFL VL+AC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 307 SHAGLLDEGQGYFALMKK---HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
SHAGL++EG+ YF+LM + +EP + HY VDLLGR+GLL+ A +FI++MP+EP
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+WGALLGAC +H+++ LG A+ + E P H+LL+NIYA+AG+ + + R M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
++ G KK A S VE + +H F D +HPQ I++K EI +KI+++GYVPD+ V
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ +E+E L HSEKLA+AF LI PG I + KN+R C DCH+ KF S + E
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
II+RD NRFHHFR+G CSC ++W
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
LS +L+AS ++ K +++HA L+ G+ + + LL+ M A +F +
Sbjct: 13 LSELLRAS---SSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM 69
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
WN L G+ R ++L + +M G P F+Y V A++ G G
Sbjct: 70 HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF 129
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
+HAHV+K G + V LV MY K G + AE +F + +D+V+WN+ L C Q G
Sbjct: 130 ALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG 189
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+ +F KM + + + T + +L+AC G L+ G+ + +K ++
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ ++ +I ++N L+ + KCG + AR LF+EM +++V+W
Sbjct: 220 CGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSW 279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD 110
+ +I GY+ N A+ LF+ M GL+PN T VL A S AG ++
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 324/543 (59%), Gaps = 11/543 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ ++ G L EAR++FDEMP +++V WT++ISGY+ N++ + A LF M
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
N+ T +++LK ++ A +K V + ++ + ++
Sbjct: 230 ----DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK-----PVAACNGMIMGFGLNGEV 280
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A ++F ++ K++ +W+ALI + RK +AL FS M REG P S S+ +
Sbjct: 281 GKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVC 340
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
S SL+ G+ VH+ +++S L +V + L+ MY K G + ++VF+R +D+V WN
Sbjct: 341 GSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWN 400
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-K 324
S++ G AQHG G+ + F +M +G AP+++TF+ VL+AC + G + EG F MK K
Sbjct: 401 SIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSK 460
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ V+ + HY VDLLGRAG L+ A+ I MP+E A VWGALL ACR HKN++L
Sbjct: 461 YQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEI 520
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+++ +L+P +GP+ILL+N+YAS R D A RK M+ V K P CSW+E N VH
Sbjct: 521 AAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVH 580
Query: 445 MFVANDDA-HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
MF A HP+ MI KK ++ +++ GY PD S V+ D++++ L+ HSEK+A
Sbjct: 581 MFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMA 640
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+A+ L+ P G I + KN+RVCGDCHSA K ++V REII+RD NRFHHF+DG CSC
Sbjct: 641 VAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCR 700
Query: 564 DYW 566
D+W
Sbjct: 701 DFW 703
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 168/411 (40%), Gaps = 95/411 (23%)
Query: 21 SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIIL 80
S F + A+ ++ +A+ G +D AR +FD++ K + +W A+++GY N +P A L
Sbjct: 10 SYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKL 69
Query: 81 FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
F +M P + T+S WN L+ Y
Sbjct: 70 FDKM------PERNTIS-----------------------------WN-----GLVSGYV 89
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
+ + +A +F + +N VSW +++ G+ ++ ++A F M E S++
Sbjct: 90 KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVVSWTV 145
Query: 201 VFTALASTGSLEQGKWVHAHV-IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
+ L G +++ + + + +K ++ G + +A ++F+ + +R
Sbjct: 146 MLGGLIEDGRVDEARRLFDMIPVKD-----VVASTNMIGGLCSEGRLSEAREIFDEMPQR 200
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+VV+W SM++G A + + FE M N+VT+ +L +GY
Sbjct: 201 NVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAML------------KGY- 243
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
R+G ++ A + + MP++P AA G ++G N
Sbjct: 244 ----------------------TRSGRINEAAELFKAMPVKPVAACNGMIMG---FGLNG 278
Query: 380 ELGAYAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
E+G A +F ++ D G L IY G +A +M+ GV+
Sbjct: 279 EVG--KARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VH+ ++ S F DI + + ++ Y KCG L +++FD KD+V W
Sbjct: 340 CGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMW 399
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+GY+Q+ E A+ +F +M G P++ T VL A G + +
Sbjct: 400 NSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKS 459
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
KY D + ++D+ R ++++A L + + + + W AL++
Sbjct: 460 KYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLS 507
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/626 (38%), Positives = 339/626 (54%), Gaps = 68/626 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + +HA I ++ + ++++ LD A +F ++ + ALI G
Sbjct: 53 LPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRG 112
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD-----------KFGRQV 116
++N + E ++ F MLRL ++P++ TL VLK S A D K G +
Sbjct: 113 LAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLK-SVAALVDVGLGRCLHGGVMKLGLEF 171
Query: 117 HAFC-------------LKYGYD----------------WNVYVG--------------- 132
+F L +G WNV +
Sbjct: 172 DSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLF 231
Query: 133 -----------SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+SL++ + R +D A LF + KN VSW +I G ++ + EKAL
Sbjct: 232 EAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALS 291
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML EG P + S A G+L+ G+ +H ++ +G QL +G LVDMYA
Sbjct: 292 MFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYA 351
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+I+ A +VF +D+++W+ M+ G A HG ++ F KM GI P++V FL
Sbjct: 352 KCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLA 411
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+LTACSH+G +D+G +F M+ + +EP HY VDLLGRAG LD AL FI+ MPI
Sbjct: 412 ILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPIN 471
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +WGAL ACR HKN+E+ AE++ +L+P G ++ L+N+YA+ GR D R R
Sbjct: 472 PDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVR 531
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MK GV+K+P S++E + VH FVA D AH + I K EI+ KQ GY+P+++
Sbjct: 532 TLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETA 591
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++E+E L HSEKLALAF LIST PGSTI I KN+RVCGDCHS K+ASK+
Sbjct: 592 WVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLS 651
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD RFHHF+DG CSCGDYW
Sbjct: 652 RREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L+ +H ++ + F+ + + +++ YAKCG + A ++F E KD++TW
Sbjct: 315 CTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTW 374
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I G++ + + A+ F +M G+ P++ ++L A D+ + L
Sbjct: 375 SVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRL 434
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKAL 180
Y + + + ++D+ R ++D+A F+ + + + V W AL E A
Sbjct: 435 DYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAE 494
Query: 181 RTFSEMLREGFEPTH-FSYSSVFTALASTGSLE 212
T ++L+ EP H SY + A+ G E
Sbjct: 495 LTAEKLLQ--LEPKHPGSYVFLSNVYAAVGRWE 525
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 344/600 (57%), Gaps = 38/600 (6%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDM 58
+C+++++L++ +H +L + D + +L A G L AR +FD + +
Sbjct: 27 RCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W +I GYS + +PE A++L+ ML + N +T +LKA + + ++ +Q+HA
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEE-TQQIHA 142
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE- 177
+K G+ +Y +SLL++Y++ + A LF ++ ++ VSWN++I G+ + E E
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEM 202
Query: 178 ------------------------------KALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+AL F M G + + + S A A
Sbjct: 203 AYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G L+QGKW+HA++ K ++ +G L+DMYAK G +E+A +VF ++ ++ V W +M
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
++G A HG G+ + WF KM G+ PNQ+TF +LTACSHAGL+ E + F M++ HG
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+P HY VDLLGRAGLL A + I MP++P AA+WGALL AC +H N+ELG
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIG 442
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+ + ++DP G +I LA+I+A+AG N AAR R+ MKE GV K P CS + H F
Sbjct: 443 KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEF 502
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
+A D++HPQ I +I E++++ GY P +L + +E+E + HSEKLA+ F
Sbjct: 503 LAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTF 562
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG TI I KN+RVC DCH+ K SKV REI++RD RFH F+DG C+CGDYW
Sbjct: 563 GLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 339/564 (60%), Gaps = 4/564 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L + +HA+ + + +++ + NT+++ Y+KC C+ A +FD+M KD+++WT +
Sbjct: 226 LGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTV 285
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ Y+QN+ A+ L ++ G+ + + S L A +G ++VH + LK G
Sbjct: 286 IAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLAC-SGLRCLSHAKEVHGYTLKRG 344
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ + + ++D+YA ++ A +F +++ K+ VSW ++I+ + +AL F
Sbjct: 345 LS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFY 403
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M EP + S+ +A AS +L +GK +H + + G L N+LVDMYA G
Sbjct: 404 LMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCG 463
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S+E+A KVF + +V W +M+ HG GKA V F M + P+ +TFL +L
Sbjct: 464 SLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLY 523
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+GL++EG+ MK K+ +EP HY VDLLGRA L+ A F++ M IEPTA
Sbjct: 524 ACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTA 583
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
VW A LGACR+H N +LG AA+++ +LDP G ++L++N++A++GR D R M
Sbjct: 584 EVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRM 643
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSHV 482
K G+KK P CSW+E N VH F+ D +HP+ I++K +I+EK+ K+ GYVP + V
Sbjct: 644 KGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLV 703
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L ++E+ L HSE+LA+A+ L+ST G+ I I KN+RVC DCH+ K SK ER
Sbjct: 704 LHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFER 763
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
E+IVRD +RFHHF DG CSCGD+W
Sbjct: 764 ELIVRDASRFHHFEDGVCSCGDFW 787
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 200/397 (50%), Gaps = 8/397 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C ++ + +H I+ + + + + N++++ YAKC + ARKLFD M + D+V+
Sbjct: 20 CGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVS 79
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W ++IS YS N Q A+ LF +M + G+ N +TL + L+A ++ K G ++HA
Sbjct: 80 WNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC-EDSSFKKLGMEIHAAI 138
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK +VYV ++L+ M+ RF +M A +F L+ K+ ++WN++IAG + +AL
Sbjct: 139 LKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEAL 198
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F + +P S S+ A G L GK +HA+ +K+ +GNTL+DMY
Sbjct: 199 QFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMY 258
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K + A VF++++ +D++SW +++ AQ+ ++ K+ G+ + +
Sbjct: 259 SKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIG 318
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
L ACS L + K G+ + +D+ G ++ A + + +
Sbjct: 319 STLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNM-IIDVYADCGNINYATRMFESIKCK 377
Query: 361 PTAAVWGALLGACRMHK---NVELGAYAAERIFELDP 394
+ W +++ +C +H N LG + + ++P
Sbjct: 378 DVVS-WTSMI-SCYVHNGLANEALGVFYLMKETSVEP 412
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
F++ V A + +G +H +IK G + FV N+LV MYAK I A K+F+R
Sbjct: 11 FTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDR 70
Query: 256 LLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ +R DVVSWNS+++ + +G + F +M + G+ N T + L AC +
Sbjct: 71 MNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130
Query: 315 GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACR 374
G A + K + V + R G + A + E+ E W +++
Sbjct: 131 GMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD-EKDNITWNSMIAGFT 189
Query: 375 MHK--NVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
+ N L + + L P + + L +I A++GRL
Sbjct: 190 QNGLYNEALQFFCGLQDANLKPDE----VSLISILAASGRL 226
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/591 (36%), Positives = 347/591 (58%), Gaps = 33/591 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ +++ H + F +++ +Q ++ ++ C +D ARK+FD ++VTW ++SG
Sbjct: 123 LQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSG 182
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++ Q + + +LF +M + G+ PN TL +L A + D + G+ ++ + +
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSAC-SKLKDLEGGKHIYKYINGGIVER 241
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKN---------------------------- 159
N+ + + L+DM+A +MD+A +F +++++
Sbjct: 242 NLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIP 301
Query: 160 ---EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
VSW A+I G+ R + +AL F EM +P F+ S+ TA A G+LE G+W
Sbjct: 302 ERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEW 361
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
V ++ K+ + FVGN L+DMY K G++ A+KVF + +D +W +M+ G A +G
Sbjct: 362 VKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGH 421
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYV 335
G+ + F M+ I P+++T++ VL AC+HAG++++GQ +F M +HG++P HY
Sbjct: 422 GEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYG 481
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VDLLGRAG L+ A + I MP++P + VWG+LLGACR+HKNV+L AA++I EL+P
Sbjct: 482 CMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE 541
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ ++LL NIYA+ R + + RK+M E G+KK P CS +E V+ FVA D +HPQ
Sbjct: 542 NGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQ 601
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I+ K + + + + GY PD+S V ++++E L HSEKLA+A+ALIS+ PG
Sbjct: 602 SKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGI 661
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI I KN+R+C DCH K S+ RE+IVRD RFHHFR G CSC ++W
Sbjct: 662 TIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 195/394 (49%), Gaps = 45/394 (11%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA---KCGCLDEARKLFDEMPVKD 57
KC + +LK+ +H+H + +D Q ++ A+ + G + AR++FD +P
Sbjct: 16 KCKSMYQLKQ---IHSHTIKMGLSSDPLFQKRVI-AFCCAHESGKMIYARQVFDAIPQPT 71
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD---KFGR 114
+ W +I GYS+ + P+N + ++ ML +KP++FT +LK G T + ++G+
Sbjct: 72 LFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLK----GFTRNMALQYGK 127
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+ +K+G+D N++V + + M++ +D A +F ++ V+WN +++G+ R
Sbjct: 128 VLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVK 187
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ +K+ F EM + G P + + +A + LE GK ++ ++ + + N
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILEN 247
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL------------GKATVR 282
L+DM+A G +++A+ VF+ + RDV+SW S++TG A G + V
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307
Query: 283 W-------------------FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W F +M + + P++ T + +LTAC+H G L+ G+ +
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
K+ ++ + +D+ + G + +A K +EM
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 153/307 (49%), Gaps = 36/307 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK L+ + ++ +I G + ++ ++N +++ +A CG +DEA+ +FD M +D+++W
Sbjct: 218 CSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISW 277
Query: 62 TALISGYSQNDQ-----------PE--------------------NAIILFSQMLRLGLK 90
T++++G++ Q PE A+ LF +M +K
Sbjct: 278 TSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVK 337
Query: 91 PNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P++FT+ S+L A GA + G V + K + +VG++L+DMY + + A
Sbjct: 338 PDEFTMVSILTACAHLGALE--LGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAK 395
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + K++ +W A+I G A GE+AL FS M+ P +Y V A G
Sbjct: 396 KVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAG 455
Query: 210 SLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSM 267
+E+G+ + + ++ G + +VD+ ++G +E+A E + N +K + + W S+
Sbjct: 456 MVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSL 515
Query: 268 LTGCAQH 274
L C H
Sbjct: 516 LGACRVH 522
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA--KSGSIEDAEK 251
+H S + L S+ Q K +H+H IK G ++ +SG + A +
Sbjct: 3 SHCFGESPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQ 62
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF+ + + + WN+M+ G ++ + V + ML + I P++ TF +L +
Sbjct: 63 VFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMA 122
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
L G+ KHG + F+ + L+D A K
Sbjct: 123 LQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARK 163
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 349/572 (61%), Gaps = 10/572 (1%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L+ R++HA L DI + N +L+ Y +CG +EAR LF+ +P + V+W
Sbjct: 334 TGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWN 392
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF---GRQVHAF 119
+I+G SQ Q + A+ LF +M G+ P + T ++L+A + + + GR++H+
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT--ALESKNEV-SWNALIAGHARKSEG 176
+ GY +G++++ MYA +D+A F A+E +++V SWNA+I+ ++ G
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++AL F M G P + +V A A +L +G VH H+ SG + FV L
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATAL 572
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
MY + GS+E A ++F ++ ++RDVV +N+M+ +Q+GL ++ F +M + G P+
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ +F+ VL+ACSH GL DEG F M++ +G+ P E HY VD+LGRAG L A + I
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELI 692
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R M ++PT VW LLGACR +++V+ G A + ELDP D +++L+NI A AG+ +
Sbjct: 693 RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWD 752
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
+AA R M+ G++K+ SW+E K+ VH FVA D +HP+ I+++ + +I++IG
Sbjct: 753 EAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD+ VL D+ E+E L HSE+LA+A ++S+ T+ + KN+RVC DCH+A K
Sbjct: 813 YVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATK 871
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F SK+V +EI+VRDT+RFHHF DG CSCGDYW
Sbjct: 872 FISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 211/373 (56%), Gaps = 12/373 (3%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K+++AR +H+ + S + + + + +AYA+ G LD+A+++FD +D+V+W A++
Sbjct: 240 KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLG 299
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Y+Q+ A +LF++ML G+ P++ TL + + G + +FGR +HA L+ G D
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGIPPSKVTLVN----ASTGCSSLRFGRMIHACALEKGLD 355
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++ +G++LLDMY R ++A LF + N VSWN +IAG ++K + ++AL F M
Sbjct: 356 RDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRM 414
Query: 187 LREGFEPTHFSYSSVFTALASTG----SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
EG P +Y ++ A+AS ++ +G+ +H+ ++ G +G +V MYA
Sbjct: 415 QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYAS 474
Query: 243 SGSIEDAEKVFNRLL---KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
G+I++A F R + DVVSWN++++ +QHG GK + +F +M +G+APNQ+T
Sbjct: 475 CGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITC 534
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ VL AC+ A L EG ++ G+E + GR G L+ A + ++ +
Sbjct: 535 VAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAV 594
Query: 360 EPTAAVWGALLGA 372
E ++ A++ A
Sbjct: 595 ERDVVIFNAMIAA 607
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 217/451 (48%), Gaps = 50/451 (11%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + R +HA I+ + ++ N +L Y KC L + ++F + V+D +WT +I
Sbjct: 43 RLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ Y+++ Q + AI +F +M + G++ + T +VLKA A D GR +HA+ ++ G
Sbjct: 101 TAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKAC-ARLGDLSQGRSIHAWIVESGL 159
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + + LL +Y + A LF +E ++ VSWNA IA +A+ + + AL F
Sbjct: 160 EGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQR 218
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M EG P + + L+ + Q + +H+ V +SG + V L YA+ G
Sbjct: 219 MQLEGVRPARIT---LVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGH 275
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ A++VF+R +RDVVSWN+ML AQHG F +ML GI P++VT + T
Sbjct: 276 LDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTG 335
Query: 306 CS--------HAGLLDE--------GQGYFALMKKHGVEPEEAHYV------------TF 337
CS HA L++ G + + G PEEA ++ T
Sbjct: 336 CSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCG-SPEEARHLFEGIPGNAVSWNTM 394
Query: 338 VDLLGRAGLLDRALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAE------R 388
+ + G + RAL+ + M +E P A + LL A + N E AE R
Sbjct: 395 IAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA--VASNPEEARAMAEGRKLHSR 452
Query: 389 IFELDPHDSGPHI--LLANIYASAGRLNDAA 417
I + S P I + +YAS G +++AA
Sbjct: 453 IVSCG-YASEPAIGTAVVKMYASCGAIDEAA 482
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 206/440 (46%), Gaps = 26/440 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + R +HA I+ S + + N +L+ Y CGC+ A LF+ M +D+V+W
Sbjct: 138 CARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSW 196
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A I+ +Q+ + A+ LF +M G++P + TL L + R +H+
Sbjct: 197 NAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSV----CAKIRQARAIHSIVR 252
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + V ++L YAR +D A +F ++ VSWNA++ +A+ +A
Sbjct: 253 ESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAAL 312
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTG--SLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
F+ ML EG P S V ASTG SL G+ +HA ++ G +GN L+DM
Sbjct: 313 LFARMLHEGIPP-----SKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDM 367
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y + GS E+A +F + + VSWN+M+ G +Q G K + F++M G+AP + T+
Sbjct: 368 YTRCGSPEEARHLFEG-IPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATY 426
Query: 300 LCVLTACS----HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
L +L A + A + EG+ + + G E A V + G +D A +
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 356 EMPIEPTAAV--WGALLGACRMHKNVELGAYAAERIFELDPHDSGPH----ILLANIYAS 409
+E V W A++ + H + G A +D H P+ + + + A
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGH---GKRALGFFRRMDLHGVAPNQITCVAVLDACAG 543
Query: 410 AGRLNDAARARKMMKESGVK 429
A L + ++ SG++
Sbjct: 544 AAALTEGVIVHDHLRHSGME 563
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 8/221 (3%)
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L QG+ +HA ++ G L +GN L+ +Y K S+ D E+VF+RL RD SW +++T
Sbjct: 45 LSQGRRIHARIVSLG--LEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+HG K + F +M + G+ + VTFL VL AC+ G L +G+ A + + G+E +
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGK 162
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ + G G + A+ M E W A + A ++++ A E
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANAQSGDLDM---ALELFQ 217
Query: 391 ELDPHDSGP-HILLANIYASAGRLNDAARARKMMKESGVKK 430
+ P I L + ++ A +++ESG+++
Sbjct: 218 RMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQ 258
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV-KDMVT 60
C L E IVH H+ S ++++ + + + Y +CG L+ AR++F+++ V +D+V
Sbjct: 541 CAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVI 600
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ A+I+ YSQN A+ LF +M + G +P++ + SVL A G D+ +
Sbjct: 601 FNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMR 660
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAGHARKSEGEKA 179
YG + + +D+ R + DA L ++ K V W L+ G RK
Sbjct: 661 QSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLL-GACRKYRDVDR 719
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
R + M+RE +P S V + + + GKW A +++
Sbjct: 720 GRLANSMVRE-LDPGDESAYVVLSNILAGA----GKWDEAAEVRT 759
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 339/561 (60%), Gaps = 4/561 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + + VHA+ + + +++ + NT+++ YAKC C+ F+ M KD+++WT +I+G
Sbjct: 365 LLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAG 424
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+QN+ AI LF ++ G+ + + SVL+A +G F R++H + K
Sbjct: 425 YAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC-SGLKSRNFIREIHGYVFKRDLA- 482
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++ + ++++++Y +D A F ++ SK+ VSW ++I +AL F +
Sbjct: 483 DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ +P + S +A A+ SL++GK +H +I+ G L + ++LVDMYA G++E
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
++ K+F+ + +RD++ W SM+ HG G + F+KM + P+ +TFL +L ACS
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACS 662
Query: 308 HAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+ EG+ +F +MK + +EP HY VDLL R+ L+ A F+R MPI+P++ +W
Sbjct: 663 HSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIW 722
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
ALLGAC +H N ELG AA+ + + D +SG + L++NI+A+ GR ND R MK +
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGN 782
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSHVLSY 485
G+KK P CSW+E N +H F+A D +HPQ I+ K + ++ + K+ GY+ + V
Sbjct: 783 GLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHN 842
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++E+ L HSE+LAL + L+ TP G+ I I KN+R+C DCH+ FK AS+V +R ++
Sbjct: 843 VSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLV 902
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD NRFHHF G CSCGD+W
Sbjct: 903 VRDANRFHHFERGLCSCGDFW 923
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 258/588 (43%), Gaps = 68/588 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L + + +HA +L S +A + ++ Y KCG L +A K+FDEM + + +W
Sbjct: 56 CVAAKALPQGQQLHALLLKSHLSAFLATKLVLM--YGKCGSLRDAVKVFDEMSERTIFSW 113
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL+ + + + AI L+ M LG+ + T SVLKA GA + + G ++H +
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGA-LGESRLGAEIHGVAV 172
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA--LESKNEVSWNALIAGHARKSEGEKA 179
K GY V+V ++L+ MY + + A LF +E ++ VSWN++I+ H + +A
Sbjct: 173 KCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEA 232
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F M G +++ + + ++ G +H V+KS +V N L+ M
Sbjct: 233 LSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAM 292
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G +EDA +VF +L RD VSWN++L+G Q+ L + +F M +G P+QV+
Sbjct: 293 YAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSV 352
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD----------- 348
L ++ A +G L +G+ A ++G++ T VD+ + +
Sbjct: 353 LNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHE 412
Query: 349 --------------------RALKFIRE-----MPIEPTAAVWGALLGACRMHKNVELGA 383
A+ R+ M ++P + G++L AC K+
Sbjct: 413 KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPM--MIGSVLRACSGLKSRNFIR 470
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN-A 442
+F+ D D + N+Y G ++ A RA + ++ + SW
Sbjct: 471 EIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFE-----SIRSKDIVSWTSMITCC 525
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL----QVH 498
VH + P A+ E+ +KQ PDS ++S + L ++H
Sbjct: 526 VH------NGLPVEAL------ELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIH 573
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ F L S + + CG ++ K V +R++I+
Sbjct: 574 GFLIRKGFFLEGPIASSLVDMYA---CCGTVENSRKMFHSVKQRDLIL 618
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
++S + + +L QG+ +HA ++KS L AF+ LV MY K GS+ DA KVF+ +
Sbjct: 48 AHSLLLDLCVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEM 105
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+R + SWN+++ G + ++ M G+A + TF VL AC G
Sbjct: 106 SERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALG 159
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L LK+ + +H ++ F + + +++++ YA CG ++ +RK+F + +D++ WT+
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTS 621
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAFC 120
+I+ + AI LF +M + P+ T ++L A SG +F
Sbjct: 622 MINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFE-----I 676
Query: 121 LKYGYD---WNVYVGSSLLDMYARFDQMDDAWFLFTALESK--NEVSWNALIAG---HAR 172
+KYGY W + + ++D+ +R + +++A+ + K +E+ W AL+ H+
Sbjct: 677 MKYGYQLEPWPEHY-ACMVDLLSRSNSLEEAYHFVRNMPIKPSSEI-WCALLGACHIHSN 734
Query: 173 KSEGEKALRTFSEMLREGFEPT--HFSYSSVFTA 204
K GE A + E+L+ E + + S++F A
Sbjct: 735 KELGELAAK---ELLQSDTENSGKYALISNIFAA 765
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/551 (40%), Positives = 322/551 (58%), Gaps = 3/551 (0%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+ G K + N ++N Y + G L ARK+FDEMP + + TW A+I+G Q + E
Sbjct: 101 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 160
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ LF +M LG P+++TL SV S AG G+Q+H + +KYG + ++ V SSL
Sbjct: 161 LSLFREMHGLGFSPDEYTLGSVFSGS-AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 219
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY R ++ D + ++ +N V+WN LI G+A+ E L + M G P +
Sbjct: 220 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 279
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ +V ++ + QG+ +HA IK G V V ++L+ MY+K G + DA K F+
Sbjct: 280 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 339
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D V W+SM++ HG G + F M + + N+V FL +L ACSH+GL D+G
Sbjct: 340 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 399
Query: 317 GYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
F +M +K+G +P HY VDLLGRAG LD+A IR MPI+ +W LL AC +
Sbjct: 400 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 459
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
HKN E+ + I ++DP+DS ++LLAN++ASA R D + RK M++ VKKE S
Sbjct: 460 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 519
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
W E K VH F D + + I+ +E++ ++K GY PD++ VL D++E+E+ L
Sbjct: 520 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDL 579
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AFAL+ P G+ I I KN+RVC DCH AFK+ S + REI +RD +RFHHF
Sbjct: 580 VQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHF 639
Query: 556 RDGFCSCGDYW 566
+G CSCGDYW
Sbjct: 640 INGKCSCGDYW 650
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G+Q+H + G+ + ++ + L+ MY++ A ++ + KN +S N LI G+ R
Sbjct: 63 GKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVR 122
Query: 173 KSE-------------------------------GEKALRTFSEMLREGFEPTHFSYSSV 201
+ E+ L F EM GF P ++ SV
Sbjct: 123 AGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSV 182
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
F+ A S+ G+ +H + IK G +L V ++L MY ++G ++D E V + R++
Sbjct: 183 FSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 242
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
V+WN+++ G AQ+G + + ++ M +G PN++TF+ VL++CS + +GQ A
Sbjct: 243 VAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE 302
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
K G A + + + + G L A K E E +W +++ A H
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFH 356
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 160/308 (51%), Gaps = 7/308 (2%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L+ + + +H + + + D+ + +++ + Y + G L + + MPV+++V W L
Sbjct: 189 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 248
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G +QN PE + L+ M G +PN+ T +VL + A + G+Q+HA +K G
Sbjct: 249 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ-GQQIHAEAIKIG 307
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
V V SSL+ MY++ + DA F+ E ++EV W+++I+ + +G++A+ F+
Sbjct: 308 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 367
Query: 185 EMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAK 242
M + E ++ ++ A + +G ++G + +++ G T +VD+ +
Sbjct: 368 TMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 427
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+G ++ AE + + +K D+V W ++L+ C H + R F+++L+ I PN +
Sbjct: 428 AGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACY 484
Query: 302 VLTACSHA 309
VL A HA
Sbjct: 485 VLLANVHA 492
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L + + +HA + + +A+ +++++ Y+KCGCL +A K F E +D V W
Sbjct: 287 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 346
Query: 62 TALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+++IS Y + Q + AI LF+ M + ++ N+ ++L A DK
Sbjct: 347 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 406
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
KYG+ + + ++D+ R +D A + ++ K + V W L++ E A
Sbjct: 407 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 466
Query: 180 LRTFSEMLR 188
R F E+L+
Sbjct: 467 QRVFKEILQ 475
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 39/222 (17%)
Query: 187 LREGFEPTH---FSYSSVFT----ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LRE F+ F+ +S+FT + + SL GK +H ++ SG F+ N L+ M
Sbjct: 29 LREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSM 88
Query: 240 YAK-------------------------------SGSIEDAEKVFNRLLKRDVVSWNSML 268
Y+K +G + +A KVF+ + R + +WN+M+
Sbjct: 89 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 148
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G Q + + F +M G +P++ T V + + + GQ K+G+E
Sbjct: 149 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 208
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + + R G L IR MP+ A W L+
Sbjct: 209 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA-WNTLI 249
>gi|326507562|dbj|BAK03174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 328/570 (57%), Gaps = 9/570 (1%)
Query: 6 KKLKEARIVHAHILGSAFKNDIA-----MQNTILNAYAKCGCLDEARKLFDEMPVK-DMV 59
+ L + + +H H+L +A + + +L YA+C + + + F ++P
Sbjct: 29 RALPKGQQLHGHLLKGGHLPAVASSHALLAHHLLTFYARCSLPELSLRAFLDLPASPSPA 88
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQV 116
W++LIS ++QN P A F +ML G+ ++ KA A A + +
Sbjct: 89 AWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPPAAKAVAAAADSSRPPLAPHAL 148
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H K + +V+VGS++LDMYA+ + DA +F + +N VSW+ALI G+A
Sbjct: 149 HGLASKTPFAGDVFVGSAVLDMYAKCGNLSDARRVFDEMPERNVVSWSALIGGYADAGMH 208
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
AL F L E + F+ S + A+ E G VHA IK+ FVG++L
Sbjct: 209 PSALCIFRSALEEAVQVNDFTVSCIVRVCAAATLFELGAQVHARSIKTALDASPFVGSSL 268
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V +Y+K G ++ A +VF+ +R++ WN++L AQHG F KM G PN
Sbjct: 269 VSLYSKCGLVDCAYRVFSAAPERNLGIWNAVLIASAQHGHTSTAFERFTKMQHAGFRPNF 328
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+TFLC+LTACSHAGL+DEG+ YF+LMK++ +EPE HY VDLLGR G + AL I
Sbjct: 329 ITFLCLLTACSHAGLVDEGKRYFSLMKEYRIEPEVEHYAAMVDLLGRVGRITEALDLIES 388
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+EP +VWGALL ACRM K+ + A AA+R+FE SG H+LL++ YA+AGR DA
Sbjct: 389 MPMEPPDSVWGALLMACRMFKDADTAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHVDA 448
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A ARK M+++G++KE SW+E VH FV+N HP+ I+ ++ EK+ GYV
Sbjct: 449 ALARKAMRDAGIRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMAVAGYV 508
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
D+S V+ D+ E+ A L HSE+LA+A L+ P G I + KN+RVC DCH+A K+
Sbjct: 509 ADTSAVVKDVDRDEKCASLGYHSERLAIALGLLIVPEGVPIRVMKNLRVCDDCHNAVKYL 568
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK R +++RD RFH F DG CSCGD+W
Sbjct: 569 SKCTGRVVVLRDNRRFHRFEDGLCSCGDFW 598
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 17/188 (9%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV------AFVGNTLVDMYAKSGSIEDAE 250
+ + + AL++ +L +G+ +H H++K GG L A + + L+ YA+ E +
Sbjct: 17 TLAELLVALSAARALPKGQQLHGHLLK-GGHLPAVASSHALLAHHLLTFYARCSLPELSL 75
Query: 251 KVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+ F L +W+S+++ AQ+GL A F +ML G+ + A + A
Sbjct: 76 RAFLDLPASPSPAAWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSI--PPAAKAVA 133
Query: 310 GLLDEGQGYFALMKKHGVEPEEAH----YV--TFVDLLGRAGLLDRALKFIREMPIEPTA 363
D + A HG+ + +V +D+ + G L A + EMP E
Sbjct: 134 AAADSSRPPLAPHALHGLASKTPFAGDVFVGSAVLDMYAKCGNLSDARRVFDEMP-ERNV 192
Query: 364 AVWGALLG 371
W AL+G
Sbjct: 193 VSWSALIG 200
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 334/566 (59%), Gaps = 42/566 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + ++E R +H H++ +D+ +++ + YA G L++ARK+F D+V W
Sbjct: 142 CSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGE-SDVVCW 200
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY + E A LF+QM +K G+
Sbjct: 201 NTMIDGYLKCGVLEAAKGLFAQM--------------PVKNIGS---------------- 230
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
WNV +++ A+ + DA LF + ++E+SW++++ G+ ++AL
Sbjct: 231 -----WNV-----MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALE 280
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M RE P F SSV A ++ G+++QG+WVHA++ ++ +L A +G L+DMYA
Sbjct: 281 IFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYA 340
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ +VF + +R++ +WN+M+ G A HG + + F K+ + PN +T +
Sbjct: 341 KCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVG 400
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VLTAC+HAG +D+G F M++ +GV+PE HY VDLLGR+GL A I MP++
Sbjct: 401 VLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK 460
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AAVWGALLGACR+H N +L + + EL+P +SG ++LL+NIYA GR +D ++ R
Sbjct: 461 PNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIR 520
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK G+K P S V+ VH F D +HPQ I++K + I E+++ G+ PD+S
Sbjct: 521 KLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTS 580
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++E+E + HSEKLA+AF LI+T PG IHI KN+RVC DCHSA K S++
Sbjct: 581 QVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIF 640
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REIIVRD R+HHF++G CSC D+W
Sbjct: 641 DREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 65/336 (19%)
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR--FDQMDDAWFLFTALESKNEVSWNA 165
T ++ Q+HA L+ G+ + YV +LL YA F D A +F+++ + N WN
Sbjct: 44 TSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNI 103
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK-- 223
+I G ++ KA+ + M+ + P F+Y ++F A + ++++G+ +H HV+K
Sbjct: 104 VIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHG 162
Query: 224 ---------SGGQLVAFVG-------------------NTLVDMY--------------- 240
+G Q+ A G NT++D Y
Sbjct: 163 IGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222
Query: 241 ----------------AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
AK G++ DA K+F+ + +RD +SW+SM+ G G K + F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
++M R P + VL ACS+ G +D+G+ A +K++ ++ + +D+ +
Sbjct: 283 QQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKC 342
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
G LD + EM E W A++G +H E
Sbjct: 343 GRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377
>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
Length = 653
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 327/545 (60%), Gaps = 8/545 (1%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ +L+ YA C D ARK+FD MP ++ VTW ALI GY+Q + E AI+LF M R G
Sbjct: 110 LATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREG 169
Query: 89 --LKPNQFT----LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+ P+++T LS + + G+G T + G +HA +K G + + +VG+SL+ +YA
Sbjct: 170 SHVAPDRYTFPALLSGIGREGGSGRTLE-LGGALHAHVIKAGLERDPFVGASLVSLYAAR 228
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
++DA F + S + + W+++I+ + E E AL F ML + +PT F YS+VF
Sbjct: 229 RTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVF 288
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ G LE GK VHAH +KS + A + N L+ MY+ G I DA+KVF+ +V+
Sbjct: 289 SVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVI 348
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFAL 321
S+NSM++ QHG K + F +M G+ P++VT L ++++ +HAGL+ EG Q + ++
Sbjct: 349 SYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSM 408
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+ G++P HY VD+L R+G + +A+K I EMP E A +W +LGAC H+++E
Sbjct: 409 VDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIET 468
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
G AE +FE++P+++ +ILL NIYA GR +A + R +M E GV K+ A SW+E
Sbjct: 469 GKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQ 528
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+ F +D +HP I++ + IK GYVPD S + +E L H EK
Sbjct: 529 RTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEK 588
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA AF ++ P G T+ I KN+RVCGDCH A+K+ S V REII+RD RFHHF GFCS
Sbjct: 589 LAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCS 648
Query: 562 CGDYW 566
CGDYW
Sbjct: 649 CGDYW 653
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 15/277 (5%)
Query: 91 PNQFTLSSVLKASGAGATDDK------FGRQVHAFCLKYGY---DWNVYVGSSLLDMYAR 141
P S++LKA+ + A+ + G Q+HA + G+ D + + +++L YA
Sbjct: 61 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 120
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTHFSYS 199
+ D A +F + +N V+WNALI G+A+ E+A+ F +M REG P +++
Sbjct: 121 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 180
Query: 200 SVFTALASTG----SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
++ + + G +LE G +HAHVIK+G + FVG +LV +YA ++EDA+ F++
Sbjct: 181 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 240
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D + W+SM++ + + F ML I P Q + V + C G+L+ G
Sbjct: 241 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 300
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ A K E + A + + + G ++ A K
Sbjct: 301 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQK 337
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 15/360 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L+ +HAH++ + + D + ++++ YA L++A+ FD++ D + W+++I
Sbjct: 194 RTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMI 253
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
S Y ++ E A+++F ML +KP QF S+V G + G+QVHA LK
Sbjct: 254 SAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILE-MGKQVHAHSLKSNT 312
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + + ++LL MY+ ++DA +F++ + N +S+N++I+ + ++AL F +
Sbjct: 313 EKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQ 372
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGNTLVDMY 240
M G P + ++ ++ G + +G V IK Q A V VDM
Sbjct: 373 MKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACV----VDML 428
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT- 298
A+SG I A K N + + + W +L C++H + R E + + P + T
Sbjct: 429 ARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFE--MEPYEATN 486
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA-HYVTFVDLLGRAGLLDRALKFIREM 357
++ + + G E + +LM + GV ++A ++ R G+ DR+ RE+
Sbjct: 487 YILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREI 546
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VHAH L S + D AM N +L Y+ CGC+++A+K+F +++++
Sbjct: 291 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 350
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD---KFGRQVH 117
++IS Q+ P+ A+ F QM GL P++ TL +++ + + AG + F V
Sbjct: 351 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 410
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K Y V +DM AR ++ A + + E ++ G K
Sbjct: 411 IEGIKPMYQHYACV----VDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDI 466
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
+ + +EML E EP Y + L G+W A ++S
Sbjct: 467 ETGKRIAEMLFE-MEP----YEATNYILLGNIYARLGRWTEAEKVRS 508
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 37/599 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEA--------------- 46
CT L ++E R+V F+ D+ + ++++ +AKCGCL+EA
Sbjct: 58 CTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIIS 117
Query: 47 ---------------RKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKP 91
+ LF M VKD+V+W A+I+ Y+ ++A LF +M LG P
Sbjct: 118 VTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTP 177
Query: 92 NQFTLSSVLKASGAGATDDKF--GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ +T SS+L GA A+ + GR +H G+D + + ++L+ MY R ++ A
Sbjct: 178 DIYTFSSIL---GACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESAR 234
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
F ++E K +WN ++A +A+ +G+ AL + ML EGF P F++SSV + AS G
Sbjct: 235 RYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLG 294
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L +GK++H G + +G LV+MYAK GS+ DA+K F+ + +DVVSW++M+
Sbjct: 295 ALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIA 354
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
AQHG + + M GIA N+VT VL ACSH G L EG YF L + G+E
Sbjct: 355 ASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIE 414
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
+E + V F+DLLGRAG L A + MP + + LLG C++H +V G +R
Sbjct: 415 RDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKR 474
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I L+P + G ++LL N+YA+AGR +D A+ R+ M++ GVK++ CS +E ++ ++ F
Sbjct: 475 IVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSV 534
Query: 449 NDDAHPQRAMIHKKWREISEKIK-QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFA 507
D ++P+ I + + ++K + GYVPD+ V ++E L+ HSEK+A+ F
Sbjct: 535 GDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFG 594
Query: 508 LISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LI++PPGST+ I KN+RVC DCH+ K ASK+ R IIVRD RFHHF G CSCGDYW
Sbjct: 595 LITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
AR++FD + ++ +W+ L+ Y QN + A+ ++ +M+R + + +TLSSVL A+
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVL-AACT 59
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM---------- 145
D + GR V + G++ +V V +SL+ ++A+ F M
Sbjct: 60 KLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 119
Query: 146 ----------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
D+ LF ++ K+ VSWNA+IA + + A F M G P
Sbjct: 120 AMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDI 179
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
+++SS+ A AS LE G+ +H + G + N L+ MY + GS+E A + F
Sbjct: 180 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYS 239
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ K+++ +WN+ML AQ GK + ++ ML G P++ TF V+ +C+ G L EG
Sbjct: 240 IEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 299
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
+ G E + V++ + G L A K + + + W A++ A
Sbjct: 300 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS-WSAMIAASAQ 358
Query: 376 HKNVE 380
H + E
Sbjct: 359 HGHAE 363
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A +VF+R+ +R+ SW+ ++ Q+ + + + +++M+R I+ + T VL AC+
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM----PIEPTAA 364
++EG+ ++ G E + + + L + G L+ A R M I A
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120
Query: 365 VWGALLGACRMHKNVEL 381
+ GA G+ + K++ L
Sbjct: 121 MIGAYCGSLKDSKSLFL 137
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/636 (35%), Positives = 347/636 (54%), Gaps = 72/636 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT- 60
C L K + +H S D +Q ++ + Y +CG + +ARK+FD M KD+VT
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 61 ----------------------------------WTALISGYSQNDQPENAIILFSQMLR 86
W ++SG++++ + A+++F ++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----- 141
LG P+Q T+SSVL + G + GR +H + +K G + V S+++DMY +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLN-MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 142 -----FDQ---------------------MDDAWFLFTALESK----NEVSWNALIAGHA 171
F+Q +D A +F + + N VSW ++IAG A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ + +AL F EM G +P H + S+ A + +L G+ H ++
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
VG+ L+DMYAK G I ++ VFN + +++V WNS++ G + HG K + FE ++R
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ P+ ++F +L+AC GL DEG YF +M +++G++P HY V+LLGRAG L A
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
I+EMP EP + VWGALL +CR+ NV+L AAE++F L+P + G ++LL+NIYA+
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
G + R M+ G+KK P CSW++ KN V+ +A D +HPQ I +K EIS+++
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
++ G+ P+ L ++QE+E L HSEKLA+ F L++TP G+ + + KN+R+CGDCH
Sbjct: 665 RKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ KF S REI +RDTNRFHHF+DG CSCGD+W
Sbjct: 725 AVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 177/432 (40%), Gaps = 72/432 (16%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA IL S +ND + ++ +Y+ C ++A + +P + ++++LI ++
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
+I +FS+M GL P+ L ++ K A + K G+Q+H G D + +V S
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVC-AELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE-- 192
+ MY R +M DA +F + K+ V+ +AL+ +ARK E+ +R SEM G E
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 193 ---------------------------------PTHFSYSSVFTALASTGSLEQGKWVHA 219
P + SSV ++ + L G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL----------------------- 256
+VIK G V + ++DMY KSG + +FN+
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 257 ------------LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ +VVSW S++ GCAQ+G + F +M G+ PN VT +L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC + L G+ + + +D+ + G ++ + MP +
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLV 455
Query: 365 VWGALLGACRMH 376
W +L+ MH
Sbjct: 456 CWNSLMNGFSMH 467
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 149/377 (39%), Gaps = 75/377 (19%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q HA LK G + Y+ + L+ Y+ ++ +DA + ++ S+++LI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+++ FS M G P ++F A + + GK +H SG + AFV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDV--------------------------------- 261
++ MY + G + DA KVF+R+ +DV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 262 --VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
VSWN +L+G + G K V F+K+ G P+QVT VL + + +L+ G+
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 320 ALMKKHGVEPEEAHYVTFVDLLG-------------------------------RAGLLD 348
+ K G+ ++ +D+ G R GL+D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 349 RAL---KFIREMPIEPTAAVWGALLGACRMH-KNVELGAYAAERIFELDPHDSGP-HILL 403
+AL + +E +E W +++ C + K++E A E E+ P H+ +
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE----ALELFREMQVAGVKPNHVTI 391
Query: 404 ANIYASAGRLNDAARAR 420
++ + G + R
Sbjct: 392 PSMLPACGNIAALGHGR 408
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 93/267 (34%), Gaps = 47/267 (17%)
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
HA ++KSG Q ++ L+ Y+ DA+ V + + S++S++ + L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
++ F +M +G+ P+ + C+ G+ + G++ + +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
+ R G + A K M + ALL A
Sbjct: 158 FHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCA------------------------- 191
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
YA G L + R M+ SG++ SW + + R+
Sbjct: 192 ---------YARKGCLEEVVRILSEMESSGIEAN-IVSWNGILSGFN-----------RS 230
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLS 484
HK+ + +KI +G+ PD V S
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSS 257
>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 654
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 327/545 (60%), Gaps = 8/545 (1%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ +L+ YA C D ARK+FD MP ++ VTW ALI GY+Q + E AI+LF M R G
Sbjct: 111 LATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREG 170
Query: 89 --LKPNQFT----LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+ P+++T LS + + G+G T + G +HA +K G + + +VG+SL+ +YA
Sbjct: 171 SHVAPDRYTFPALLSGIGREGGSGRTLE-LGGALHAHVIKAGLERDPFVGASLVSLYAAR 229
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
++DA F + S + + W+++I+ + E E AL F ML + +PT F YS+VF
Sbjct: 230 RTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVF 289
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ G LE GK VHAH +KS + A + N L+ MY+ G I DA+KVF+ +V+
Sbjct: 290 SVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVI 349
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFAL 321
S+NSM++ QHG K + F +M G+ P++VT L ++++ +HAGL+ EG Q + ++
Sbjct: 350 SYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSM 409
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+ G++P HY VD+L R+G + +A+K I EMP E A +W +LGAC H+++E
Sbjct: 410 VDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIET 469
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
G AE +FE++P+++ +ILL NIYA GR +A + R +M E GV K+ A SW+E
Sbjct: 470 GKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQ 529
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+ F +D +HP I++ + IK GYVPD S + +E L H EK
Sbjct: 530 RTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEK 589
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA AF ++ P G T+ I KN+RVCGDCH A+K+ S V REII+RD RFHHF GFCS
Sbjct: 590 LAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCS 649
Query: 562 CGDYW 566
CGDYW
Sbjct: 650 CGDYW 654
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 15/277 (5%)
Query: 91 PNQFTLSSVLKASGAGATDDK------FGRQVHAFCLKYGY---DWNVYVGSSLLDMYAR 141
P S++LKA+ + A+ + G Q+HA + G+ D + + +++L YA
Sbjct: 62 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 121
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTHFSYS 199
+ D A +F + +N V+WNALI G+A+ E+A+ F +M REG P +++
Sbjct: 122 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 181
Query: 200 SVFTALASTG----SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
++ + + G +LE G +HAHVIK+G + FVG +LV +YA ++EDA+ F++
Sbjct: 182 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 241
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D + W+SM++ + + F ML I P Q + V + C G+L+ G
Sbjct: 242 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 301
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ A K E + A + + + G ++ A K
Sbjct: 302 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQK 338
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 15/360 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L+ +HAH++ + + D + ++++ YA L++A+ FD++ D + W+++I
Sbjct: 195 RTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMI 254
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
S Y ++ E A+++F ML +KP QF S+V G + G+QVHA LK
Sbjct: 255 SAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILE-MGKQVHAHSLKSNT 313
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + + ++LL MY+ ++DA +F++ + N +S+N++I+ + ++AL F +
Sbjct: 314 EKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQ 373
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGNTLVDMY 240
M G P + ++ ++ G + +G V IK Q A V VDM
Sbjct: 374 MKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACV----VDML 429
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT- 298
A+SG I A K N + + + W +L C++H + R E + + P + T
Sbjct: 430 ARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFE--MEPYEATN 487
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA-HYVTFVDLLGRAGLLDRALKFIREM 357
++ + + G E + +LM + GV ++A ++ R G+ DR+ RE+
Sbjct: 488 YILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREI 547
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VHAH L S + D AM N +L Y+ CGC+++A+K+F +++++
Sbjct: 292 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 351
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD---KFGRQVH 117
++IS Q+ P+ A+ F QM GL P++ TL +++ + + AG + F V
Sbjct: 352 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 411
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K Y V +DM AR ++ A + + E ++ G K
Sbjct: 412 IEGIKPMYQHYACV----VDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDI 467
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
+ + +EML E EP Y + L G+W A ++S
Sbjct: 468 ETGKRIAEMLFE-MEP----YEATNYILLGNIYARLGRWTEAEKVRS 509
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 338/563 (60%), Gaps = 9/563 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A VH ++ + D+ + + +++ YAK G L A LF +P +++ + A+I+G+ +
Sbjct: 225 AEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCR 284
Query: 71 NDQ------PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++ A+ L+S+M G++P++FT SS+L+A A + FG+Q+H LK+
Sbjct: 285 DEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNL-AGEFGFGKQIHGQVLKHS 343
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + Y+GS+L+D+Y+ M+D + F +L ++ V+W ++I+G + EKALR F
Sbjct: 344 FHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQ 403
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
E + G +P F+ SSV A AS G+ + IK G +GN+ + M A+SG
Sbjct: 404 ESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSG 463
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ + F + RDVVSW+++++ AQHG + +R F +M+ +APN+VTFL VLT
Sbjct: 464 DVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLT 523
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH GL+D+G Y+ +MK ++G+ P H VDLLGRAG L A FIR+ A
Sbjct: 524 ACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDA 583
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
VW +LL +CR+H ++E G A++I +L+P S +++L N+Y AG L+ A++ R +M
Sbjct: 584 VVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLM 643
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
KE GVKKEP SW+E ++ VH FVA D +HP+ I+KK E+ KI+++ D++
Sbjct: 644 KERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANT-DNASTG 702
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
S + + HSEK+A+AF +I P + I + KN+RVC DCHS K S RE
Sbjct: 703 SDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENRE 762
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
II+RD RFHHFR G CSCGDYW
Sbjct: 763 IILRDGIRFHHFRGGSCSCGDYW 785
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 222/435 (51%), Gaps = 17/435 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ + VHA + N + + N++ + YA CG + EAR++FD D V+W
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSW 172
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK-FGRQVHAFC 120
+L+SGY + E + +FS M GL N F L S++K +G+ + VH
Sbjct: 173 NSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR------KS 174
+K G D ++++ S+++DMYA+ + +A LF ++ N + +NA+IAG R K
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKE 292
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+AL +SEM G +P+ F++SS+ A G GK +H V+K ++G+
Sbjct: 293 VSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGS 352
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+D+Y+ SG +ED + F L K+D+V+W SM++GC Q+ L + +R F++ + G+ P
Sbjct: 353 ALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKP 412
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ T V+ AC+ + G+ L K+G A +F+ + R+G +D +
Sbjct: 413 DLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRF 472
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF-ELDPHDSGPH-ILLANIYAS--- 409
+EM + W A++ + H A A RIF E+ P+ + N+ +
Sbjct: 473 QEMESRDVVS-WSAVISSHAQHGC----ARDALRIFNEMMNAKVAPNEVTFLNVLTACSH 527
Query: 410 AGRLNDAARARKMMK 424
G ++D R ++MK
Sbjct: 528 GGLVDDGLRYYEIMK 542
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 202/401 (50%), Gaps = 20/401 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD--EARKLFDEMPVKDMV 59
CT L + VHAHI + + ++N++L AY + G A +L DEMP ++ V
Sbjct: 12 CTALPHVAA---VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAV 68
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
++ LIS YS+ P A+ F++ GL+ ++FT ++ L A + A D + G+ VHA
Sbjct: 69 SYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAAC-SRALDLRTGKAVHA 127
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G V++ +SL MYA +M +A +F A E ++VSWN+L++G+ R E+
Sbjct: 128 MTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREE 187
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ--GKWVHAHVIKSGGQLVAFVGNTL 236
L+ FS M G F+ S+ AS + + + VH V+K+G F+ + +
Sbjct: 188 TLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAM 247
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA--QHGLGKATVR----WFEKMLRN 290
+DMYAK G++ +A +F + +V+ +N+M+ G + +GK R + +M
Sbjct: 248 IDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSR 307
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G+ P++ TF +L AC+ AG G+ + KH ++ +DL +G ++
Sbjct: 308 GMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDG 367
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
+ R +P + W +++ C ++ E A R+F+
Sbjct: 368 YRCFRSLPKQDI-VTWTSMISGCVQNELFE----KALRLFQ 403
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + + F AM N+ ++ A+ G +D + F EM +D+V+W
Sbjct: 424 CASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSW 483
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+IS ++Q+ +A+ +F++M+ + PN+ T +VL A G D R
Sbjct: 484 SAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKN 543
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+YG + + ++D+ R ++ DA F+ + + V W +L+A + E+
Sbjct: 544 EYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQ 603
Query: 181 RTFSEMLREGFEPT-HFSYSSVFTALASTGSL 211
+++ EPT SY ++ G L
Sbjct: 604 LVADQIM--DLEPTSSASYVILYNMYLDAGEL 633
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK--SGSIEDAEKVFNRLLKRDVV 262
L S +L VHAH+ ++ F+ N+L+ Y + G+ A ++ + + +R+ V
Sbjct: 9 LRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAV 68
Query: 263 SWNSMLTGCAQHGL-GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
S+N +++ ++ GL G+A + G+ ++ T+ L ACS A L G+
Sbjct: 69 SYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKA---- 124
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
H +T +D LG L +L
Sbjct: 125 ----------VHAMTVLDGLGNGVFLSNSL 144
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/572 (38%), Positives = 339/572 (59%), Gaps = 15/572 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--MPVKDMV 59
C L +H H++ + + + +Q ++++ Y KC + ARK+FDE V
Sbjct: 66 CASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAV 125
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ ALI+GYS N + +A++LF QM + G+ N T+ ++ AG FG +HA
Sbjct: 126 CYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC-AGPIHLGFGTSLHAC 184
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+++G D ++ VG+ LL MY R +D A LF + K ++WNA+I+G+A+
Sbjct: 185 SVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHV 244
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L + +M G P + V ++ A G+ G+ V + SG F+ N L++M
Sbjct: 245 LDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINM 304
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ G++ A +F+ + +++V+SW +++ G HG G+ V+ F++M+ + P+ F
Sbjct: 305 YARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAF 364
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACSHAGL ++G YF M++ +G++P HY VDLLGRAG L+ A K I M
Sbjct: 365 VSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMS 424
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+EP AVWGALLGAC++H+NVEL A E++ E +P + G ++LL+NI++ AG + R
Sbjct: 425 VEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILR 484
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R MM+E +KKEP CS+VE + +H+F+A D HPQ I+ + + IK+ G D
Sbjct: 485 VRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSND 544
Query: 479 SSHVLSYADQQEREAKL----QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
+ DQ+ R +L VHSEKLA+AF LI+T PG+ I + KN+RVCGDCH K
Sbjct: 545 N-------DQESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLK 597
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++V+R+++VRD RFHHF++G CSC DYW
Sbjct: 598 LVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 4/341 (1%)
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W A + ++ + A+ L+ QML G PN FT K S A + G Q+H
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFK-SCASLSLPLAGSQLHGH 81
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA-LESKN-EVSWNALIAGHARKSEGE 177
+K G + +V +SL+ MY + + A +F S+N V +NALIAG++ S
Sbjct: 82 VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A+ F +M +EG + + A L G +HA ++ G VGN L+
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY + GS++ A K+F+ + ++ +++WN+M++G AQ+GL + + KM GI P+ V
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPV 261
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T + VL++C+H G G+ ++ G +++ R G L +A M
Sbjct: 262 TLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGM 321
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
E W A++ MH EL + + D G
Sbjct: 322 -TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDG 361
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/560 (40%), Positives = 324/560 (57%), Gaps = 23/560 (4%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + +HA I ++ + ++++ LD A +F ++ + ALI G
Sbjct: 53 LPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRG 112
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
++N + E ++ F MLRL ++P++ TL VLK S A D GR +H +K G ++
Sbjct: 113 LAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLK-SVAALVDVGLGRCLHGGVMKLGLEF 171
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V SL+DMY + ++ LF +N+ S +L
Sbjct: 172 DSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAE---------------------SILL 210
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P + S A G+L+ G+ +H ++ +G QL +G LVDMYAK G+I+
Sbjct: 211 WNGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIK 270
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +VF +D+++W+ M+ G A HG ++ F KM GI P++V FL +LTACS
Sbjct: 271 SASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACS 330
Query: 308 HAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+G +D+G +F M+ + +EP HY VDLLGRAG LD AL FI+ MPI P +W
Sbjct: 331 HSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIW 390
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GAL ACR HKN+E+ AE++ +L+P G ++ L+N+YA+ GR D R R +MK
Sbjct: 391 GALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNR 450
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
GV+K+P S++E + VH FVA D AH + I K EI+ KQ GY+P+++ VL
Sbjct: 451 GVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNI 510
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+++E+E L HSEKLALAF LIST PGSTI I KN+RVCGDCHS K+ASK+ REII+
Sbjct: 511 EEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIIL 570
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF+DG CSCGDYW
Sbjct: 571 RDIKRFHHFKDGTCSCGDYW 590
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L+ +H ++ + F+ + + +++ YAKCG + A ++F E KD++TW
Sbjct: 228 CTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTW 287
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I G++ + + A+ F +M G+ P++ ++L A D+ + L
Sbjct: 288 SVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRL 347
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKAL 180
Y + + + ++D+ R ++D+A F+ + + + V W AL E A
Sbjct: 348 DYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAE 407
Query: 181 RTFSEMLREGFEPTH-FSYSSVFTALASTGSLE 212
T ++L+ EP H SY + A+ G E
Sbjct: 408 LTAEKLLQ--LEPKHPGSYVFLSNVYAAVGRWE 438
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 327/543 (60%), Gaps = 12/543 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
DI N +L Y ++ AR FD+MPVKD +W +ISG+SQN + A LF M
Sbjct: 67 DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVM- 125
Query: 86 RLGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
P + ++S SG + D +Q+ + +V ++++ + +F +
Sbjct: 126 -----PVRNSVSWNAMISGYVESGDLDLAKQL----FEVAPVRSVVAWTAMITGFMKFGK 176
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++ A F + KN V+WNA+IAG+ + E L+ F M+ GF P S SSV
Sbjct: 177 IELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLG 236
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
++ +L+ GK VH + KS G +L+ MY K G +EDA K+F + ++DVV+W
Sbjct: 237 CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTW 296
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMK 323
N+M++G AQHG G+ + F+KM G+ P+ +TF+ VL+AC+HAG +D G YF ++++
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+GVE + HY VDLLGR G L A+ I++MP +P +A++G LLGACR+HKN+EL
Sbjct: 357 DYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAE 416
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AA+ + LDP + ++ LAN+YA+ R + A R+ MK++ V K P SW+E K+ V
Sbjct: 417 FAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVV 476
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F + D HP+ A IH+K E+ K++ GYVPD + L +++++ L HSEKLA
Sbjct: 477 HEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLA 536
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+A+ LI P G+ I + KN+RVCGDCHSA K+ S + R IIVRDT RFHHFR G CSCG
Sbjct: 537 IAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCG 596
Query: 564 DYW 566
DYW
Sbjct: 597 DYW 599
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L LK + VH I S +I ++L+ Y KCG L++A KLF MP KD+VTW
Sbjct: 237 CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTW 296
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATD 109
A+ISGY+Q+ E A+ LF +M G+KP+ T +VL A AG D
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVD 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+S N +S N +I H R + ALR F M + T +++S+ ++ +GK
Sbjct: 1 KSSNVISSNRVITNHIRSGDLNSALRVFESMTVK----TTVTWNSMLAGYSN----RRGK 52
Query: 216 WVHAHVIKSGGQLV-------AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
IK QL F N ++ Y + +E A F+++ +D SWN+M+
Sbjct: 53 ------IKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMI 106
Query: 269 TGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+G +Q+G+ F M +RN ++ N +++ +G LD + F + V
Sbjct: 107 SGFSQNGMMDQARELFLVMPVRNSVSWN-----AMISGYVESGDLDLAKQLFEVAPVRSV 161
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA----CRMHKNVELGA 383
A F+ + G ++ A K+ EMP++ W A++ C+ ++L
Sbjct: 162 VAWTAMITGFM----KFGKIELAEKYFEEMPMK-NLVTWNAMIAGYIENCQAENGLKLFK 216
Query: 384 YAAERIFELDP 394
E F +P
Sbjct: 217 RMVESGFRPNP 227
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/600 (38%), Positives = 348/600 (58%), Gaps = 40/600 (6%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAY--AKCGCLDEARKLFDEMPVKDMVTWTA 63
K + + + HAH++ + N +L + G L A +LFD++P D+ +
Sbjct: 26 KSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNT 85
Query: 64 LISGYSQ-NDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I ++ N++ +F M+R+ G PN++T V KA G G + G Q+ +
Sbjct: 86 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAI 144
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-----WFL------------------------- 151
K G + N++V ++++ MYA + +D+A W L
Sbjct: 145 KIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKE 204
Query: 152 -FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F + ++ VSW +IAG+ + ++AL F EML+ G P F+ +S A A+ +
Sbjct: 205 MFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA 264
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSML 268
L+QG+W+H ++ KS ++ + +L+DMYAK G I+ A KVF+ LK V WN+M+
Sbjct: 265 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 324
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGV 327
G A HG K + FE+M ++PN+VTF+ +L ACSH L++EG+GYF M +G+
Sbjct: 325 GGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGI 384
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
EPE HY VDLLGR+GLL A + + MP+ P A +WGALLGACR+HK++E G +
Sbjct: 385 EPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGK 444
Query: 388 RIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFV 447
I ELD G H+LLAN+Y+++G+ ++A R+ ++ SG KK P CS +E H F+
Sbjct: 445 IIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFL 504
Query: 448 ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV-LSYADQQEREAKLQVHSEKLALAF 506
D +HPQ ++ E++ K+K GYVP+ V L D++++E L HSEKLA+AF
Sbjct: 505 VGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAF 564
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LI+TPPG+ I I KN+RVC DCH A KF SKV +REIIVRD R+HHF+DGFCSC DYW
Sbjct: 565 GLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 6/228 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLF-DEMPVKDMV- 59
C +L L + R +H +I S K + + ++L+ YAKCG +D A K+F DE +K V
Sbjct: 259 CANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVW 318
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W A+I GY+ + + + AI LF QM + PN+ T ++L A G ++ +
Sbjct: 319 PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSM 378
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEK 178
YG + + ++D+ R + +A +F + + W AL+ + E+
Sbjct: 379 ASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIER 438
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSG 225
R ++++E + H + L S +G ++ K V + SG
Sbjct: 439 GQR-IGKIIKE-LDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSG 484
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS--GSIEDAEKVFNRLLKRDV 261
+L S S+ Q K HAH+I +G L N L+ + S GS+ A ++F+++ K DV
Sbjct: 21 SLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDV 80
Query: 262 VSWNSMLTGCAQHGLGK-ATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+N+M+ A ++R F M+R +G PN+ TF+ V AC + + EG+
Sbjct: 81 FIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIR 140
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
K G+E + + GL+D A + + + ++ W ++G
Sbjct: 141 VHAIKIGLESNLFVTNAMIRMYANWGLVDEARR-VFDWSLDQDLYSWNIMIGG 192
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/544 (39%), Positives = 333/544 (61%), Gaps = 5/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+A N +++ Y G +D+A +LF +MP +D+++W+++I+G N + E A++LF M+
Sbjct: 180 DVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMV 239
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV--YVGSSLLDMYARFD 143
G+ + L L A+ A + G Q+H K G DW+ +V +SL+ YA
Sbjct: 240 ASGVCLSSGVLVCGLSAA-AKIPAWRVGIQIHCSVFKLG-DWHFDEFVSASLVTFYAGCK 297
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
QM+ A +F + K+ V W AL+ G+ + +AL F EM+R P S++S
Sbjct: 298 QMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALN 357
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ +E+GK +HA +K G + +VG +LV MY+K G + DA VF + +++VVS
Sbjct: 358 SCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVS 417
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM- 322
WNS++ GCAQHG G + F +MLR G+ P+ +T +L+ACSH+G+L + + +F
Sbjct: 418 WNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFG 477
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+K V HY + VD+LGR G L+ A + MP++ + VW ALL ACR H N++L
Sbjct: 478 QKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLA 537
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AA +IFE++P S ++LL+N+YAS+ R + A R+ MK +GV K+P SW+ K
Sbjct: 538 KRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQ 597
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
H F++ D +HP I++K + K+K++GYVPD L + +++E L HSE+L
Sbjct: 598 KHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERL 657
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF L+ST GS I + KN+RVCGDCH+A K +K+V+REI+VRD++RFH F++G CSC
Sbjct: 658 AIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSC 717
Query: 563 GDYW 566
GDYW
Sbjct: 718 GDYW 721
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 109/223 (48%), Gaps = 7/223 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ ++ +++HA + ++ + +++ Y+KCG + +A +F + K++V+W
Sbjct: 359 CCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSW 418
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G +Q+ A+ LF+QMLR G+ P+ T++ +L A K F
Sbjct: 419 NSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQ 478
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
K + +S++D+ R ++++A + ++ K N + W AL++ + S + A
Sbjct: 479 KRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAK 538
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
R +++ EP + + + L ++ S +W +I+
Sbjct: 539 RAANQIFE--IEPDCSAAYVLLSNLYASSS----RWAEVALIR 575
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
++ YA++ + +A +F R+ +DVVSWNS++ GC G + F++M R +
Sbjct: 90 TIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTV- 148
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
V++ ++ G++ E + F M+ ++ + A + + G +D AL+
Sbjct: 149 ---VSWTTLVDGLLRLGIVQEAETLFWAMEP--MDRDVAAWNAMIHGYCSNGRVDDALQL 203
Query: 354 IREMP 358
+MP
Sbjct: 204 FCQMP 208
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/558 (40%), Positives = 331/558 (59%), Gaps = 17/558 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H + ++++ +LG+A +L+ YAKCG L AR++FD MP ++ VTW
Sbjct: 143 CLHPNRNSKSKLTDGVLLGTA----------LLDMYAKCGSLLYARRVFDAMPARNEVTW 192
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL---KPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+ALI G+ + A +LF ML GL P +++S L+A A + G Q+HA
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRAC-ASLDHLRMGEQLHA 249
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G ++ G+SLL MYA+ +D A LF + K+ VS++AL++G+ + E+
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEE 309
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A F +M EP + S+ A + +L+ G+ H VI G + N L+D
Sbjct: 310 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALID 369
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G I+ + +VFN + RD+VSWN+M+ G HGLGK F +M G P+ VT
Sbjct: 370 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 429
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+C+L+ACSH+GL+ EG+ +F +M +G+ P HY+ VDLL R G LD A +FI+ M
Sbjct: 430 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSM 489
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+ VW ALLGACR++KN++LG + I EL P +G +LL+NIY++AGR ++AA
Sbjct: 490 PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAA 549
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R + K G KK P CSW+E ++H FV D +HPQ I+++ I IK++GY P
Sbjct: 550 EVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQP 609
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D+S VL +++E+E L HSEKLA+A+ ++S TI + KN+RVCGDCH+ K S
Sbjct: 610 DTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHIS 669
Query: 538 KVVEREIIVRDTNRFHHF 555
V R IIVRD NRFHHF
Sbjct: 670 LVKRRAIIVRDANRFHHF 687
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 211/432 (48%), Gaps = 32/432 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L R +H H + + + D+ + +L+ Y KC CL +A +F MP +D+V W
Sbjct: 20 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 79
Query: 62 TALISGYSQNDQPENAI--ILFSQMLRLGLKPNQFTLSSVLK---ASGAGATDDKFGRQV 116
A+++GY+ + +A+ +L QM L+PN TL ++L GA A G V
Sbjct: 80 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ----GTSV 135
Query: 117 HAFCLKYGYDWN----------VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNAL 166
HA+C++ N V +G++LLDMYA+ + A +F A+ ++NEV+W+AL
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195
Query: 167 IAGHARKSEGEKALRTFSEMLREG---FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
I G S +A F ML +G PT S +S A AS L G+ +HA + K
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 253
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
SG GN+L+ MYAK+G I+ A +F+ + +D VS++++++G Q+G +
Sbjct: 254 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 313
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F+KM + P+ T + ++ ACSH L G+ + G+ E + +D+ +
Sbjct: 314 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 373
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD----PHDSGP 399
G +D + + MP + W ++ +H LG A E++ P D
Sbjct: 374 CGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGKEATALFLEMNNLGFPPDGVT 429
Query: 400 HILLANIYASAG 411
I L + + +G
Sbjct: 430 FICLLSACSHSG 441
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 18/296 (6%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
MLR + PN +T LKA A A D GR +H + G +++V ++LLDMY +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALA-DHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCA 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF--SEMLREGFEPTHFSYSSV 201
+ DA +F + +++ V+WNA++AG+A A+ +M P + ++
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 202 FTALASTGSLEQGKWVHAHVIK--------SGGQLV--AFVGNTLVDMYAKSGSIEDAEK 251
LA G+L QG VHA+ I+ S +L +G L+DMYAK GS+ A +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG---IAPNQVTFLCVLTACSH 308
VF+ + R+ V+W++++ G F+ ML G ++P + L AC+
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS 237
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
L G+ AL+ K GV + + + + +AGL+D+A+ EM ++ T +
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 293
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
MLR P ++++ A ++ G+ +H H I +G Q FV L+DMY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF--EKMLRNGIAPNQVTFLCVL 303
+ DA +F + RD+V+WN+ML G A HG+ V +M + + PN T + +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHY----------VTFVDLLGRAGLLDRALKF 353
+ G L +G A + + P +D+ + G L A +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 354 IREMPIEPTAAVWGALLG 371
MP W AL+G
Sbjct: 181 FDAMPAR-NEVTWSALIG 197
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/636 (37%), Positives = 356/636 (55%), Gaps = 80/636 (12%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-----LDEARKLFDEMPVKD 57
T L LK+A HA IL + D + +++ +YA + + ++FD + +
Sbjct: 45 TSLHHLKQA---HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 101
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
+ W +I +N++P AI+L+ +M+ +PN++T +VLKA S AG + G QV
Sbjct: 102 VFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAE--GVQV 159
Query: 117 HAFCLKYGYDWNVYVGSS--------------------------------LLDMYARFDQ 144
HA +K+G + ++ SS ++D Y RF +
Sbjct: 160 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGE 219
Query: 145 MDDAWFLFTAL--------------------------------ESKNEVSWNALIAGHAR 172
++ A LF + + ++E+SW+A+I G+ +
Sbjct: 220 VEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQ 279
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ +AL F +M +E P F SV +A A+ G+L+QG+W+H + ++ QL +
Sbjct: 280 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 339
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G +LVDMYAK G I+ A +VF ++ ++V SWN+M+ G A HG + + F KM I
Sbjct: 340 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DI 396
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRAL 351
PN++TF+ VL AC+H GL+ +G F M+K +GVEP+ HY VDLLGRAGLL A
Sbjct: 397 NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 456
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
K + +P EPT AVWGALLGACR H NVELG + + EL+P +SG + LL+NIYA AG
Sbjct: 457 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 516
Query: 412 RLNDAARARKMMKESGVKKEPACSWVET-KNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
R + RK+MKE G+K P S ++ + VH F+ D +HPQ I++ ++ E++
Sbjct: 517 RWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 576
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+ GY PD S VL D++E+E + HSEKLA+ F LI+T PG+TI I KN+RVC DCH
Sbjct: 577 QMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCH 636
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SA K S+V REIIVRD R+HHFR+G CSC D+W
Sbjct: 637 SATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 172/408 (42%), Gaps = 79/408 (19%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--------- 52
C+ + E VHAH++ D + ++ + YA G L EAR++ D+
Sbjct: 147 CSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC 206
Query: 53 -----------------------MPVKDMV-TWTALISGYSQNDQPE------------- 75
MP + M+ TW A+ISG+S+ E
Sbjct: 207 WNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERD 266
Query: 76 ------------------NAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
A+ +F QM + ++P +F L SVL A + GA D GR +
Sbjct: 267 EISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQ--GRWI 324
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H + + + +G+SL+DMYA+ ++D AW +F + +K SWNA+I G A
Sbjct: 325 HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRA 384
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVG 233
E A+ FS+M P ++ V A A G +++G + + K G Q+ +
Sbjct: 385 EDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHY-- 439
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
+VD+ ++G + +AEKV + + + W ++L C +HG + R K+L
Sbjct: 440 GCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER-VGKILLELE 498
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
N + + + AG +E LMK+ G++ + +DL
Sbjct: 499 PQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPG--TSIIDL 544
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 192 EPTHFSYSSVFTALAS--TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG----- 244
E + S+ ++ L + T SL K HA ++++G +++ +LV YA
Sbjct: 26 ETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYL 85
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S E + +VF+ + K +V WN M+ C ++ + + +M+ PN+ T+ VL
Sbjct: 86 SFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLK 145
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS AG++ EG A + KHG+ + + + + G L A + + + E A
Sbjct: 146 ACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 205
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
W A++ VE AA +FE P S
Sbjct: 206 CWNAMIDGYLRFGEVE----AARELFEGMPDRS 234
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/635 (37%), Positives = 345/635 (54%), Gaps = 78/635 (12%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK----------- 56
L AR +HA S D + +++L+AY + G AR LFD MP
Sbjct: 33 LPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALV 92
Query: 57 ---------------------------DMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
+++TW L+SG +++ + +A++ + M GL
Sbjct: 93 AAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGL 152
Query: 90 -KPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
+P+ +S L A G G G+Q+H + +K G + V ++L+DMY + Q +
Sbjct: 153 LRPDATGVSCALSAVGDVGLV--SVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAE 210
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE---------------------- 185
+F + S NALIAG +R ++ +ALR F E
Sbjct: 211 VVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQ 270
Query: 186 -------------MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
M +G EP + V A A+ +L G+ H ++ G +V
Sbjct: 271 NGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYV 330
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
+ LVDMYAK G ++DA +F+ ++ R+VVSWN+M+ G A +G V F ML+
Sbjct: 331 SSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQ 390
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
P+ VTF C+L AC+ AGL +EG+ YF M ++GV P HY V LLGRAG LD A
Sbjct: 391 KPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAY 450
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
I +MP EP A +WG+LLG+CR+H NV+L AAE++F L+P ++G ++LL+NIYAS
Sbjct: 451 DLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKK 510
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
+ R R+MMK+ G+KKE CSW+E KN VHM +A DD+HP I +K +++ +++
Sbjct: 511 MWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMR 570
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
++G+VP + VL ++QE++ L VHSEKLA+A LIST PG+T+ + KN+R+CGDCH
Sbjct: 571 KLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHE 630
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A KF S REI VRDTNRFHHF G CSCGD+W
Sbjct: 631 AMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/596 (35%), Positives = 349/596 (58%), Gaps = 32/596 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +KL+ + VHAH S F I + N +++ YAKCG L +A+ LFDE+P KD+ +W
Sbjct: 73 CLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSW 132
Query: 62 TALISGYSQNDQPENAIILFSQM---------------LRLGLKPNQFTLSSVLKASGAG 106
+ISGY+ + E A LF +M + G L +++ + +
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESS 192
Query: 107 ATD----------------DKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ + G+++H + ++ G + + V ++LLD+Y + +++A
Sbjct: 193 NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARG 252
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + K+ VSW +I ++ F +++ G P ++++ V A A +
Sbjct: 253 IFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAA 312
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+ GK VH ++ + G +F + LV +Y+K G+ E A +VFN++ + D+VSW S++ G
Sbjct: 313 EQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVG 372
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
AQ+G +++FE +LR+G P+++TF+ VL+AC+HAGL+D G YF ++ +KHG+
Sbjct: 373 YAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVH 432
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY +DLL R+G A I MP++P +W +LLG CR+H N+EL AA+ +
Sbjct: 433 TADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKAL 492
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
FEL+P + +I L+NIYA+AG + + R M G+ K+P SW+E K VH+F+
Sbjct: 493 FELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVG 552
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HP+ + IH+ E+S+K+K+ GYV D++ VL +++++E + HSEKLA+AF +I
Sbjct: 553 DTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGII 612
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
ST PG+ I + KN+R C DCH+A K+ SK+V+R+IIVRD+NRFH F DG CSC DY
Sbjct: 613 STSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 49/350 (14%)
Query: 65 ISGYSQNDQPENAIILFSQMLRLG--------LKPNQFTLSSVLKASGAGATDDKFGRQV 116
+S +S++ + E I LF Q RL + L S L A+ + G++V
Sbjct: 26 LSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRV 85
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA + + + + L+ MYA+ + DA LF + K+ SWN +I+G+A
Sbjct: 86 HAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRI 145
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTG--------------------------- 209
E+A + F EM +FS+++V + S G
Sbjct: 146 EQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201
Query: 210 ---------SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
SL +GK +H ++I+SG +L V L+D+Y K GS+ +A +F+++ +D
Sbjct: 202 ALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKD 261
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+VSW +M+ C + G K F ++ +G+ PN+ TF VL AC+ G+
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
M + G +P V + + G + A + +MP P W +L+
Sbjct: 322 YMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLI 370
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P+ YS++ A LE GK VHAH S + N L+ MYAK GS+ DA+
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+ + ++D+ SWN+M++G A G + + F++M + ++ V++ G
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGW 175
Query: 312 LDEGQGYFALMKKH------------------------------------GVEPEEAHYV 335
E F +M+++ G+E +E +
Sbjct: 176 YMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWT 235
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+DL G+ G L+ A +M + + W ++ C
Sbjct: 236 ALLDLYGKCGSLNEARGIFDQMADKDIVS-WTTMIHRC 272
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 336/567 (59%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +H +L S D + +++ YA CG + AR+LFD MP +++ W
Sbjct: 72 CVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLW 131
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI Y+++ E AI L+ M+ G++P+ FT LKA A + GR+VH L
Sbjct: 132 NVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLET-GREVHERVL 190
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ +++V + L+DMYA+ +DDA +F + ++ V WN++IA + + +AL
Sbjct: 191 GTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALS 250
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M G PT + S +A A +L +G+ +H + G + +LVDMYA
Sbjct: 251 LCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYA 310
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFL 300
KSG ++ A +F +L+KR++VSWN+M+ G HG ++ F KM + + P+ +TF+
Sbjct: 311 KSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFV 370
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+AC+H G++ E + +F LM + ++P H+ VD+LG AG + A I+ MP+
Sbjct: 371 GVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPM 430
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P + +WGALL C++HKNVELG A +++ EL+P D+G ++LL+NIYA +G+ AAR
Sbjct: 431 QPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARV 490
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK+M G+KK CSW+E K H F+ D +HP+ A I+++ + + GY+PD+
Sbjct: 491 RKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDT 550
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V E+ ++ HSE+LA+AF LISTP G+ + + KN+RVC DCH K S++
Sbjct: 551 MPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQI 610
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REII+RD NR+HHF +G CSC DYW
Sbjct: 611 VQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++ Y+SV + ++ SL G+ +H ++ SG + LVD+YA G + A ++F
Sbjct: 61 SYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLF 120
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
+ + KR+V WN ++ A+ G + ++ + M+ G+ P+ T+
Sbjct: 121 DGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTY 166
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 337/567 (59%), Gaps = 15/567 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC-GCLDEARKLFDEMPVKDMVT 60
C+ + L + +H+ ++ + +ND+++ N++++ Y KC +++A + F + ++++
Sbjct: 327 CSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVIS 386
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT+LI+G+S++ E +I +F M +G++PN FTLS++L A G + + R++H +
Sbjct: 387 WTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQ-TRKLHGYI 445
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K D +V VG++L+D YA +DDAW + + ++ ++ +++ +L + E AL
Sbjct: 446 IKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMAL 505
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ M ++ FS +S +A A +E GK +H + +KSG V N LVD+Y
Sbjct: 506 NIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLY 565
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G I DA + F + + D VSWN ++ G A +G + + FE M G+ P+Q+T L
Sbjct: 566 GKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCL 625
Query: 301 CVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL ACSH GL+D G YF M+ KHG+ P+ HYV VDLLGRAG L+ A+ I MP
Sbjct: 626 LVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPF 685
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A ++ LLGAC++H N+ LG + A + ELDP D ++LLAN+Y +GR +
Sbjct: 686 KPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKT 745
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+MM+E GV+K P SW+E +N VH+F A D +HPQ IH+K + + + G
Sbjct: 746 RRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQGIWYQE 805
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L++ HSEKLA+AF LISTPP + I I KNIR+C DCH +++
Sbjct: 806 NRALAH------------HSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRL 853
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V+REIIVRD NRFH F+ G CSC YW
Sbjct: 854 VDREIIVRDGNRFHSFKKGECSCRGYW 880
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 247/496 (49%), Gaps = 20/496 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ +++ +H+ I+ F+ D+ + N +L+ Y KC + EAR+LFDEMP +D+ +WT L+
Sbjct: 29 RSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLM 88
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
S Y + E A+ LF ML G PN+FTLS+ L++ A + G + A K G+
Sbjct: 89 SAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSA-LREFNHGTRFQALVTKSGF 147
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
D N +GS+L+D Y++ +A+ +F + + + VSW +++ +AL+ +
Sbjct: 148 DSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHR 207
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M++ G P F++ + A + G L GK VHAH++ +L + LVDMY K S
Sbjct: 208 MIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQS 266
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
IEDA KV L+ DV W ++++G Q + + F +M +G+ PN T+ +L A
Sbjct: 267 IEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNA 326
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR-AGLLDRALKFIREMPIEPTAA 364
CS LD G+ + + G+E + + + VD+ + + +++ A++ R + P
Sbjct: 327 CSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVI 385
Query: 365 VWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
W +L+ H E + + A + + P+ L+ I + G + + RK+
Sbjct: 386 SWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNS----FTLSTILGACGTIKSLTQTRKL 441
Query: 423 MKESGVKKEPACSWVETKNAV-----HMFVANDDAHPQRAMIHK---KWREISEKIKQIG 474
+ K A + V NA+ + + +D H M H+ + ++ +I Q G
Sbjct: 442 --HGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTG 499
Query: 475 YVPDSSHVLSYADQQE 490
+ +++++ ++ +
Sbjct: 500 NHEMALNIITHMNKDD 515
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 186/350 (53%), Gaps = 3/350 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L++ A + S F ++ + + +++ Y+KCGC EA ++F+ M D+V+W
Sbjct: 126 CSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSW 185
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T ++S + + A+ L+ +M++ G+ PN+FT +L AS + +G+ VHA +
Sbjct: 186 TMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLN--YGKLVHAHLM 243
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + N+ + ++L+DMY + ++DA + + W A+I+G + + +A+
Sbjct: 244 MWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAIT 303
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G P +F+YS + A +S +L+ GK +H+ V+ +G + VGN+LVDMY
Sbjct: 304 AFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYM 363
Query: 242 K-SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K S IEDA + F + +V+SW S++ G ++HGL + +++ F M G+ PN T
Sbjct: 364 KCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLS 423
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+L AC L + + + K+ + + VD G++D A
Sbjct: 424 TILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDA 473
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 193 PTHFSYSSV--FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P+ YS + + ++ S+ G +H+ +IK G Q F+ N L+ +Y K + +A
Sbjct: 11 PSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEAR 70
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
++F+ + RDV SW +++ + G + + F+ ML +G PN+ T L +CS
Sbjct: 71 QLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALR 130
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ G + AL+ K G + +D + G A + M
Sbjct: 131 EFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177
>gi|242053821|ref|XP_002456056.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
gi|241928031|gb|EES01176.1| hypothetical protein SORBIDRAFT_03g029620 [Sorghum bicolor]
Length = 592
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/570 (39%), Positives = 327/570 (57%), Gaps = 9/570 (1%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTIL-----NAYAKCGCLDEARKLFDEMPVK-DMV 59
+ L + + +H H+L + A +T+L YA+C D + + F ++P
Sbjct: 23 RALPKGQQLHGHLLKAGHVPATASSHTLLGHHLLTFYARCALPDLSLRAFLDLPAPPSPA 82
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQV 116
W++LIS ++QN A F +ML G+ + S KA A T + +
Sbjct: 83 AWSSLISSFAQNGLAAAAFDTFRRMLAAGVPATDRNIPSAAKAVAAAETLSRPPFAPHAL 142
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H K + +V+VGS++LDMYA+ + DA LF + +N VSW+ALI G+A
Sbjct: 143 HGLAAKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMPERNVVSWSALICGYADAGMH 202
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
A+ F L E F+ SS+ A+ E G VHA K+ FVG++L
Sbjct: 203 PAAMGIFRLALEEAVPVNDFTVSSIIRVCAAATLFELGAQVHARATKTALDASPFVGSSL 262
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V +Y+K G +E A +VFN ++++ WN++L AQHG A F +M G PN
Sbjct: 263 VSVYSKCGLVECAYRVFNEAPEKNLGIWNAVLIASAQHGHTAAAFERFMEMQNAGFRPNH 322
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
+TFLC++TACSHAGL+DEG+ YF+LMK +G+EP+ HY + VDLLGR G + AL I
Sbjct: 323 ITFLCLVTACSHAGLVDEGKRYFSLMKDYGIEPQAEHYASMVDLLGRVGRIKEALDLIES 382
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
MP+EP +VWGALL +CR+ K+ + AA+R+FE SG H+LL++ YA+AGR DA
Sbjct: 383 MPMEPPESVWGALLMSCRIFKDADTAEIAAKRLFETGSRSSGAHMLLSSTYAAAGRHIDA 442
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A ARK M+++GV+KE SW+E VH FV+N H + I+K ++ EK++ GYV
Sbjct: 443 ALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHQRSEEIYKVLEKVGEKMEAAGYV 502
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
D+S V+ D E+ A ++ HSE+LA+ L+ P G I + KN+RVC DCHSA K+
Sbjct: 503 ADTSAVVKDVDGDEKRATVRYHSERLAIGLGLLIVPQGVPIRVMKNLRVCDDCHSAIKYL 562
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+K R +++RD RFH F DG CSCGD+W
Sbjct: 563 TKCTGRVVVLRDNRRFHRFEDGVCSCGDFW 592
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSG-----GQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ + AL++ +L +G+ +H H++K+G +G+ L+ YA+ + + + F
Sbjct: 13 AELLVALSAARALPKGQQLHGHLLKAGHVPATASSHTLLGHHLLTFYARCALPDLSLRAF 72
Query: 254 NRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
L +W+S+++ AQ+GL A F +ML G+ A + A L
Sbjct: 73 LDLPAPPSPAAWSSLISSFAQNGLAAAAFDTFRRMLAAGVPATDRNIPSAAKAVAAAETL 132
Query: 313 DEGQGYFALMKKHGVEPEEAH----YV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
FA HG+ + +V +D+ + G L A + EMP E W
Sbjct: 133 SRPP--FAPHALHGLAAKTPFAGDVFVGSAILDMYAKCGHLADARRLFDEMP-ERNVVSW 189
Query: 367 GALL 370
AL+
Sbjct: 190 SALI 193
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/551 (37%), Positives = 339/551 (61%), Gaps = 2/551 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + EA+ H I+ + D+ + N ++NAY+KCG ++ AR++FD M + +V+W
Sbjct: 63 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 122
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I Y++N A+ +F +M G K ++FT+SSVL A G D +++H +
Sbjct: 123 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC-DALECKKLHCLSV 181
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K D N+YVG++LLD+YA+ + DA +F +++ K+ V+W++++AG+ + E+AL
Sbjct: 182 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 241
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ R E F+ SSV A ++ +L +GK +HA + KSG FV ++ VDMYA
Sbjct: 242 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 301
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ ++ +F+ + ++++ WN++++G A+H K + FEKM ++G+ PN+VTF
Sbjct: 302 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 361
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ C H GL++EG+ +F LM+ +G+ P HY VD+LGRAGLL A + I+ +P +
Sbjct: 362 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 421
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
PTA++WG+LL +CR++KN+EL AAE++FEL+P ++G H+LL+NIYA+ + + A++R
Sbjct: 422 PTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSR 481
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K++++ VKK SW++ K+ VH F + HP+ I + K ++ GY P
Sbjct: 482 KLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVE 541
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
H L + ++E L HSEKLAL F L+ P S + I KN+R+C DCH K AS
Sbjct: 542 HELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMAT 601
Query: 541 EREIIVRDTNR 551
R IIVRD NR
Sbjct: 602 RRFIIVRDVNR 612
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/588 (36%), Positives = 339/588 (57%), Gaps = 37/588 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H HI+ + ++ N ++N Y KCG + +A LF+++P +D ++W ++++ +Q +
Sbjct: 25 LHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANL 84
Query: 74 PENAIILFSQMLRL-GLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYV 131
P + +F M + GL+P+ + + ++KA GA K G+QVHA + + V
Sbjct: 85 PHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAM--KQGKQVHATFIVSPVSDDDVV 142
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS------- 184
SSL+DMYA+ D +F ++ SKN +SW A+I+G+A+ A++ F
Sbjct: 143 KSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL 202
Query: 185 ------------------------EMLREGFEPTH-FSYSSVFTALASTGSLEQGKWVHA 219
EM +G + F SS+ A A+ L GK +H
Sbjct: 203 LSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHC 262
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
VI G + FV N LVDMYAK + A+K+F R+++RD+VSW S++ G AQHGL +
Sbjct: 263 LVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEE 322
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFV 338
+ + +ML G+ PN+VTF+ ++ ACSH GL+ +G+ +F +++K +G+ P HY +
Sbjct: 323 ALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLL 382
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
DLL R+G L+ A I+ MP +P A W ALL AC H+N +G A+ + L P D
Sbjct: 383 DLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPS 442
Query: 399 PHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAM 458
+ILL+NIYASA ++ R++M VKKEP S + +F+A + +HP +
Sbjct: 443 TYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEE 502
Query: 459 IHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIH 518
I E+ ++K+ GY+PD+S VL +QQE+E +L HSE+LA+A+ L+ PG +H
Sbjct: 503 IFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLH 562
Query: 519 IKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+RVCGDCH+ KF S +V+REI+VRD NR+HHF+DG CSC ++W
Sbjct: 563 IVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 158/307 (51%), Gaps = 35/307 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +K+ + VHA + S +D +++++++ YAKCG D R +FD + K+ ++W
Sbjct: 115 CAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISW 174
Query: 62 TALISGYSQNDQPENAIILFSQM----------LRLGLKP-------------------- 91
TA+ISGY+Q+ + +AI LF +M L GL
Sbjct: 175 TAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGID 234
Query: 92 --NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ F LSS++ AS A G+Q+H + GY+ +++V ++L+DMYA+ + A
Sbjct: 235 IVDPFILSSIIGASANLAVLG-LGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAK 293
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + ++ VSW ++I G A+ E+AL ++ ML G +P ++ + A + G
Sbjct: 294 KIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVG 353
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+ +G++ +IK G + T L+D+ ++SG +E+AE + + K D +W ++
Sbjct: 354 LVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAAL 413
Query: 268 LTGCAQH 274
L+ C H
Sbjct: 414 LSACNHH 420
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
G+++H +K G D + ++L++MY + + DA LF L ++ +SW +++ +
Sbjct: 21 IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANN 80
Query: 172 RKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ + L F M ++ G +P H+ ++ + A A G+++QGK VHA I S
Sbjct: 81 QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
V ++LVDMYAK G + VF+ + ++ +SW +M++G AQ G ++ F+KM
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKM 197
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/559 (39%), Positives = 325/559 (58%), Gaps = 37/559 (6%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G L AR +F+++P T ++I GY+ + P AI+ + M+ GL P++FT S+
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM----- 145
K+ G G+Q+H K G+ + Y+ ++L++MY+ FD+M
Sbjct: 86 KSCGVLCE----GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141
Query: 146 ----------------DDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
+A LF +E + N WN +I GH S+ E+AL F+EM
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G + + +S+ A G+LE GKW+H ++ K ++ +G LVDMYAK GSIE
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 261
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A +VF + ++DV++W +++ G A G G + F +M + + P+ +TF+ VL ACSH
Sbjct: 262 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSH 321
Query: 309 AGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
AGL++EG YF M K+G++P HY VD+LGRAG + A I+ MP+ P V
Sbjct: 322 AGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLV 381
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
LL ACR+H N+ + AA+++ ELDP + G ++LL+NIY+S A + R++M E
Sbjct: 382 GLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERN 441
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD 487
+KK P CS +E VH FV D +HPQ + I++ ++ ++K GYVPD S VL D
Sbjct: 442 IKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMD 501
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++E+E +L +HSEKLA+AF L+ST PG+ I + KN+RVC DCHSA KF S+V REIIVR
Sbjct: 502 EKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVR 561
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D NRFHHF G CSC D+W
Sbjct: 562 DRNRFHHFTKGSCSCRDFW 580
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 37/303 (12%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E + +H H F +D +QNT++N Y+ CGCL ARK+FD+M K +V+W +I
Sbjct: 91 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 150
Query: 68 YSQNDQP--------------------------------ENAIILFSQMLRLGLKPNQFT 95
Y+Q D P E A+ LF++M G+K ++ T
Sbjct: 151 YAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 210
Query: 96 LSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
++S+L A + GA + G+ +H + K + +V +G++L+DMYA+ ++ A +F
Sbjct: 211 MASLLIACTHLGALE--LGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 268
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ K+ ++W ALI G A +G KAL F EM +P ++ V A + G + +G
Sbjct: 269 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 328
Query: 215 -KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCA 272
+ ++ K G Q +VDM ++G I +AE + N + D +L+ C
Sbjct: 329 IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACR 388
Query: 273 QHG 275
HG
Sbjct: 389 IHG 391
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTHL L+ + +H +I + D+A+ +++ YAKCG ++ A ++F EMP KD++TW
Sbjct: 218 CTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW 277
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TALI G + Q A+ LF +M +KP+ T VL A S AG ++ ++
Sbjct: 278 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA-YFNSMP 336
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA------------WFLFTALESKNEVSWNALIA 168
KYG ++ ++DM R ++ +A +F+ L S + N ++A
Sbjct: 337 NKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVA 396
Query: 169 GHA 171
A
Sbjct: 397 ERA 399
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
S ++VAF SGS+ A VFN++ + NS++ G L + + +
Sbjct: 12 SASKIVAFCA------LHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILF 65
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
++ M+ G+ P++ TF + +C G+L EG+ K G + T +++
Sbjct: 66 YQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSN 122
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGA 372
G L A K +M + + W ++GA
Sbjct: 123 CGCLVSARKVFDKM-VNKSVVSWATMIGA 150
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 328/566 (57%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +++E R H +L + F ++N +++ Y+KC + +A +++E+PV D+V +
Sbjct: 143 CCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAY 202
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++S +N + + M+ +K ++ T + A D + G VH L
Sbjct: 203 NSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLC-ASLKDLRLGLHVHGKML 261
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + YV S++++MY + + A +F L+S+N V W A++A + E+AL
Sbjct: 262 TSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALN 321
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M +E + F+Y+ + A A + G +H H KSG + VGN L++MYA
Sbjct: 322 LFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYA 381
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG IE A+KVF+ ++ RD+++WN+M+ G + HGLGK + F+ ML PN VTF
Sbjct: 382 KSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTG 441
Query: 302 VLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC H GL+ EG Y LMK+ GV+P HY V LL + G L+ A F+R P++
Sbjct: 442 VLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVK 501
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
W LL AC +H+N LG + AE + E+DP+D G + LL+NIYA R + + R
Sbjct: 502 WDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVR 561
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M++ +KKEP SW+E N H+F + D+ HP ++K +E+ IK +GY PD
Sbjct: 562 KLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIG 621
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + +++E L HSEKLA+A+ L+ P ++I + KN+R+C DCHSA + SKV
Sbjct: 622 AVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVT 681
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R I+VRD NRFHHFRDG CSC DYW
Sbjct: 682 NRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 188/373 (50%), Gaps = 15/373 (4%)
Query: 6 KKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
K LK + +H+H++ A +N I N+++N YAK + A LFD MP +++V+W+A
Sbjct: 43 KNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSA 102
Query: 64 LISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLS-SVLKASGAGATDDKFGRQVHAFCL 121
L++GY N I L M+ G + PN++ L+ ++ G ++ GRQ H L
Sbjct: 103 LMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEE--GRQCHGLLL 160
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ ++ YV ++L+ MY++ + DA ++ + + V++N++++ + L
Sbjct: 161 KTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLE 220
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M+ E + ++ + F+ AS L G VH ++ S + A+V + +++MY
Sbjct: 221 VLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYG 280
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G A VF+ L R+VV W +++ C Q+G + + F KM + + N+ T+
Sbjct: 281 KCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAV 340
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV----TFVDLLGRAGLLDRALKFIREM 357
+L AC AGL G +L+ H + H+V +++ ++G ++ A K +M
Sbjct: 341 LLNAC--AGLSARRNG--SLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM 396
Query: 358 PIEPTAAVWGALL 370
+ W A++
Sbjct: 397 -MHRDIITWNAMI 408
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 15/296 (5%)
Query: 89 LKPNQFTLSS------VLKASGAGATDDKFGRQVHAFCL--KYGYDWNVYVGSSLLDMYA 140
L+PN + SS +LK S A + K G+ +H+ + + ++ +SL++ YA
Sbjct: 19 LRPNAVSPSSPLDLIKLLKLS-ADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYA 77
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG-FEPTHFSYS 199
+ +Q+ A LF + +N VSW+AL+ G+ K +R +M+ EG P + +
Sbjct: 78 KVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILA 137
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
++ G +E+G+ H ++K+G +V N LV MY+K ++DA V+N +
Sbjct: 138 IAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVN 197
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
D+V++NS+L+ ++G + + M+ + ++VTF+ + C+ L G
Sbjct: 198 DIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVH 257
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAG--LLDRALKFIREMPIEPTAAVWGALLGAC 373
M VE + +++ G+ G L+ R + + +W A++ +C
Sbjct: 258 GKMLTSDVECDAYVSSAIINMYGKCGKSLMARG---VFDGLQSRNVVLWTAVMASC 310
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/589 (37%), Positives = 337/589 (57%), Gaps = 33/589 (5%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E + +HAH+L + + + + A A+ +F + ++ W + ++
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+ D P +AI LF ++ + P+ +T S VLKA + D + G+ VH + K G N+
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKAC-SRLLDVRNGKIVHGYVEKLGLQSNM 148
Query: 130 YVGSSLLDMYAR----------FDQM---------------------DDAWFLFTALESK 158
++ + ++ +YA FD+M + A+ LF + +
Sbjct: 149 FLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPER 208
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH 218
N SW ++I G+A+ + ++A+ F EM G P + +V A A G+L G+ +H
Sbjct: 209 NVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIH 268
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
+SG + V NTL+DMY K G +EDA ++F+ + +R VVSW++M+ G A HG +
Sbjct: 269 DFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAE 328
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTF 337
+ F KM+ G+ PN VTF+ +L ACSH G++++G+ YFA M + +G+ P HY
Sbjct: 329 DALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCM 388
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
VDL RAGLL A +FI MPI P VWGALLG C++HKN++L A + +LDP +
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLND 448
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
G +++L+NIYA AGR D AR RK+M++ GVKK P S + + V+ FVA DD HPQ
Sbjct: 449 GYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTE 508
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
I + W ++ +++K GYVP++S VL ++ ++E L HSEKLA+ F LI T PG+ I
Sbjct: 509 EIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVI 568
Query: 518 HIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+RVC DCH+A K S V REI+VRD NRFH F++G CSCGDYW
Sbjct: 569 RIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 166/307 (54%), Gaps = 36/307 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT- 60
C+ L ++ +IVH ++ ++++ +QN I++ YA CG + ARK+FD+MP +D++T
Sbjct: 123 CSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITW 182
Query: 61 ------------------------------WTALISGYSQNDQPENAIILFSQMLRLGLK 90
WT++I GY+Q + + AI LF +M GL
Sbjct: 183 NIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL 242
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN+ T+ +VL A A + GR++H F + GY+ N+ V ++L+DMY + ++DA
Sbjct: 243 PNEVTVVAVLVAC-ADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACR 301
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F +E + VSW+A+IAG A E AL F++M+ G +P ++ + A + G
Sbjct: 302 IFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGM 361
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSM 267
+E+G+ A + + G +V + + +VD+++++G +++A E + N + + V W ++
Sbjct: 362 VEKGRKYFASMTRDYG-IVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGAL 420
Query: 268 LTGCAQH 274
L GC H
Sbjct: 421 LGGCKVH 427
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%), Gaps = 13/219 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +H S ++ +I + NT+++ Y KCGCL++A ++FD M + +V+W
Sbjct: 255 CADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSW 314
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+G + + + E+A+ LF++M+ G+KPN T +L A +K + +
Sbjct: 315 SAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARKSEGE 177
YG + ++D+++R + +A F+ + N V W AL+ G H E
Sbjct: 375 DYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAE 434
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+A R S++ +P + Y V + + + E G+W
Sbjct: 435 EATRHLSKL-----DPLNDGYYVVLSNIYA----EAGRW 464
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 343/566 (60%), Gaps = 6/566 (1%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K + + +HA ++ + D M +L + +KC +D A ++F ++ +TALI
Sbjct: 43 KHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 102
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G+ + +AI L+S+ML + P+ + ++S+LKA G+ + GR+VH+ LK G
Sbjct: 103 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALRE-GREVHSRALKLGL 161
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALE----SKNEVSWNALIAGHARKSEGEKALR 181
N V ++++Y + ++ DA +F + +K+ V W A+I G R E +AL
Sbjct: 162 SSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALE 221
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M E P F+ V +A + G+LE G+WVH+++ K +L FVGN L++MY+
Sbjct: 222 AFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 281
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ GSI++A+ VF+ + RDV+++N+M++G + +G + + F M+ + P VTF+
Sbjct: 282 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVG 341
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL+D G F ++ + +GVEP+ HY VDLLGR G L+ A IR M +
Sbjct: 342 VLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMT 401
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + G LL AC+MHKN+ELG A+ + + DSG ++LL+++YAS+G+ +AA+ R
Sbjct: 402 PDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVR 461
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MKE+G++KEP CS +E N +H F+ D HP++ I++K E++ ++ GY P+
Sbjct: 462 AKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKE 521
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL + E+E L +HSE+LA+ + LIST P + I + KN+RVC DCHSA K +K+
Sbjct: 522 VVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKIT 581
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+++VRD NRFH+F +G CSCGDYW
Sbjct: 582 RRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 174/339 (51%), Gaps = 16/339 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP----VKD 57
C L+E R VH+ L ++ ++ I+ Y KCG L +AR++F+EMP KD
Sbjct: 140 CGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKD 199
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
V WTA+I G+ +N++ A+ F M ++PN+FT+ VL A S GA + GR V
Sbjct: 200 TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALE--IGRWV 257
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H++ K+ + N++VG++L++MY+R +D+A +F ++ ++ +++N +I+G + +
Sbjct: 258 HSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKS 317
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNT 235
+A+ F M+ PT+ ++ V A + G ++ G K H+ G +
Sbjct: 318 RQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGC 377
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNG 291
+VD+ + G +E+A + + + D + ++L+ C H LG+ K+L +
Sbjct: 378 MVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVA----KVLEDR 433
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+ T++ + + +G E A MK+ G++ E
Sbjct: 434 GQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKE 472
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ + L + + Q +HA +I++G F+ L+ +K +I+ A ++F +
Sbjct: 35 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 94
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
V + +++ G G ++ + +ML + I P+ +L AC L EG+ +
Sbjct: 95 VYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHS 154
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA---AVWGALL 370
K G+ + ++L G+ G L A + EMP + A W A++
Sbjct: 155 RALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 207
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 318/567 (56%), Gaps = 38/567 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L L+ + +H I+ ++ + N + + YA+CG +D+AR+LFD M ++++VTW
Sbjct: 165 CTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTW 224
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY +N QPE I LF +M LKP+Q T SSVL A
Sbjct: 225 NLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------------------- 265
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
Y + +D+A +F + K+EV W +I G A+ + E AL
Sbjct: 266 -----------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALL 308
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FSEML E P ++ SSV ++ A SL G+ VH G V + LVDMY
Sbjct: 309 LFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYC 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G DA +F+ + R+VVSWNSM+ G A +G + +E ML + P+ VTF+
Sbjct: 369 KCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVG 428
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC HAGL++EG+ YF M +HG+EP HY V+L GR+G +D+A+ I M E
Sbjct: 429 VLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQE 488
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P + +W +L C M +++ G AA + EL+P ++ P+I+L+N+YA+ GR D A R
Sbjct: 489 PNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIR 548
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MK VKK A SW+E N VH FVA+D HP +IH + + K+++ G+ P+++
Sbjct: 549 SLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTN 608
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGST-IHIKKNIRVCGDCHSAFKFASKV 539
VL + E+ + HSEKLALA+ LI P G T I I KNIR C DCH KF S +
Sbjct: 609 LVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNI 668
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R +I+RD+NRFHHF +G CSC DYW
Sbjct: 669 TRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 168/365 (46%), Gaps = 38/365 (10%)
Query: 9 KEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
K I HA + + D N +L+ YAK G +++ R +FD MP +D V++ +ISG
Sbjct: 70 KSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISG 129
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
++ N + A+ +F +M + GLKP ++T SVL A D + G+Q+H +
Sbjct: 130 FAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNAC-TQLLDLRRGKQIHGRIIICNLGG 188
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV+V ++L D+YAR ++D A LF + +N V+WN +I+G+ + + EK + F EM
Sbjct: 189 NVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQ 248
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+P + SSV A Y ++G I+
Sbjct: 249 VSNLKPDQVTASSVLGA-----------------------------------YIQAGYID 273
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A KVF + ++D V W M+ GCAQ+G + + F +ML P+ T V+++C+
Sbjct: 274 EARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCA 333
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
L GQ GV + VD+ + G+ A M + W
Sbjct: 334 KLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVS-WN 392
Query: 368 ALLGA 372
+++G
Sbjct: 393 SMIGG 397
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 133/255 (52%), Gaps = 16/255 (6%)
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ WN ++L +YA+ ++D +F + S++ VS+N +I+G A G AL F
Sbjct: 89 NFSWN-----AMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVF 143
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI--KSGGQLVAFVGNTLVDMYA 241
M +EG +PT +++ SV A L +GK +H +I GG + FV N L D+YA
Sbjct: 144 LRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNV--FVCNALTDLYA 201
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G I+ A ++F+R++ R+VV+WN M++G ++ + + F +M + + P+QVT
Sbjct: 202 RCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASS 261
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE- 360
VL A AG +DE + F ++ E +E + + + G + AL EM +E
Sbjct: 262 VLGAYIQAGYIDEARKVFGEIR----EKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLEN 317
Query: 361 --PTAAVWGALLGAC 373
P +++ +C
Sbjct: 318 ARPDGYTISSVVSSC 332
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV----HAHVIKSGGQLVAFVGNT 235
LR + L +H Y+ + ++Q K + H H+ K F+ N
Sbjct: 7 LRQAIDTLYTNGPASHECYTRLALECFRASDVDQAKRLKSHMHLHLFKPND---TFIHNR 63
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+++YAKSG I A K+F+ + +RD SWN+ML+ A+ GL + F+ M + +
Sbjct: 64 LLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM----PSRD 119
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
V++ V++ + G G F M+K G++P E +V+ ++
Sbjct: 120 SVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLN 163
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/629 (38%), Positives = 356/629 (56%), Gaps = 69/629 (10%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAK--CGCLDEARKLFDEMPVKDMVT 60
T L LK+ VHA L + D + T++ YA L+ A K+F+ +P ++
Sbjct: 41 TSLHHLKQ---VHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFV 97
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ +I G QN++P AI + +M+ +PN+FT ++ KA A + G QVHA
Sbjct: 98 FNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKAC-TAAEAAEEGVQVHAHV 156
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQ---------------------MDDAWF--------- 150
+K G +V++ S+ + MY F + M D +
Sbjct: 157 IKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAK 216
Query: 151 -LFTALESKN-------------------------------EVSWNALIAGHARKSEGEK 178
LF ++E KN E+SW+A+I G+ + ++
Sbjct: 217 ELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKE 276
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F+ M RE P F SSV A A+ G+L+QG+W+HA+V + A +G LVD
Sbjct: 277 ALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVD 336
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G ++ A VF ++ K++V +WN+M+ G HG + + F KM + PN +T
Sbjct: 337 MYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGIT 396
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL+AC+H+G++DEG F M++ +G+EP HY VDLLGRAGLL A + + M
Sbjct: 397 LLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSM 456
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+EP+AAVWGALLGACR H +VELG + + EL+P +SG + LL+NIYA AGR +D A
Sbjct: 457 PMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVA 516
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
RK+MKE GVK S ++ VH F D +HPQ I+ + + +++K G+ P
Sbjct: 517 NVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSP 576
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
++S VL +++E+EA+LQ HSEKLA+AF LI+T PG+TIH+ KN+R+C DCHSAFK S
Sbjct: 577 NTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLIS 636
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V +REIIVRD R+HHF+ G CSC D+W
Sbjct: 637 QVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L + R +HA++ ++ D + +++ YAKCG LD A +F++M K++ TW
Sbjct: 303 CANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTW 362
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G + + E+AI LF +M + +PN TL VL A D+ R ++
Sbjct: 363 NAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEE 422
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
YG + + ++D+ R + +A +++ + W AL+ + + E
Sbjct: 423 VYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGE 482
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
R +L EP +S AL S G+W
Sbjct: 483 RVGKILLE--LEPQ----NSGRYALLSNIYARAGRW 512
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS--GSIEDAEKVFNRLLKRDVVSW 264
S+ SL K VHA +++G +V TLV YA ++ A KVF + +V +
Sbjct: 39 SSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVF 98
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
N ++ GC Q+ + + KM+ PN+ T+ + AC+ A +EG A + K
Sbjct: 99 NIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIK 158
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
G+ + + + G G ++ A + + E
Sbjct: 159 QGLSGDVHIRSAGIQMYGSFGEVEGARRMLGE 190
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/608 (35%), Positives = 346/608 (56%), Gaps = 44/608 (7%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L ++A +H +++ S F +++ + +++ Y+KCG L +A KLF M V+D+V W+
Sbjct: 349 SELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWS 408
Query: 63 ALISGYSQNDQPENAIILFSQMLR----------LGLKPN---QFTLSSVLKASGAGATD 109
++I+ Y + + A+ +F QM++ + ++P ++S A+
Sbjct: 409 SMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKV 468
Query: 110 DKFGRQVH-----------------------AFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
F + H + YG ++ + + MY F+++D
Sbjct: 469 KAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRID 528
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP-------THFSYS 199
A +F + + WN +I G A +L +S+M+ +G +P S
Sbjct: 529 AASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSIL 588
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
SV A + G+L +G+W H++VI++G + V ++DMY+K GS++ A +F+ +
Sbjct: 589 SVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK 648
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
D+V W++M+ HG G+ + F++M++ G+ P+ VTF CVL+ACSH+GLL+EG+ YF
Sbjct: 649 DLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF 708
Query: 320 ALMKKHGVEPEE-AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN 378
LM + V + ++Y VDLLGRAG L A+ I MP+EP A++WG+LLGACR+H N
Sbjct: 709 QLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 768
Query: 379 VELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVE 438
++L A+ +F LDP +G H+LL+NIYA+ R N+ + RKMM G K S VE
Sbjct: 769 LDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVE 828
Query: 439 TKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH 498
N VH F D +HPQ ++ K E++ +K +GYVP + VL +++ +EA L H
Sbjct: 829 YDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYH 888
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
SE+LA+AF LI+T PG+T+ I KN+R+CGDCH+A K SK+V R I+VRD +RFH F DG
Sbjct: 889 SERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDG 948
Query: 559 FCSCGDYW 566
CSCGDYW
Sbjct: 949 VCSCGDYW 956
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 139/272 (51%), Gaps = 36/272 (13%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
++ F D+ + N++LN YAK GC A LF +MP KD+++W+ +I+ Y+ N+ A
Sbjct: 197 VMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEA 256
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ LF +M+ +PN T+ S L+A ++ G+++H +
Sbjct: 257 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEE-GKKIHKIAV---------------- 299
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
W K+ VSW AL++G+A+ K++ F ML +G +P +
Sbjct: 300 -----------W--------KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVA 340
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ A + G +Q +H +V++SG FVG +L+++Y+K GS+ DA K+F ++
Sbjct: 341 VVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI 400
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
RDVV W+SM+ HG G + F++M++
Sbjct: 401 VRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 40/399 (10%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ + + +D + + YAKC L ARK+FDE P ++ W + + Y + Q
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 74 PENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK---YGYDWNV 129
E + LF M+ G P+ FT+ LKA AG + G+ +H F K G D +
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKAC-AGLRMLELGKVIHGFAKKNDEIGSD--M 139
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM-LR 188
+VGS+L+++Y++ QM +A +F + + V W +++ G+ + ++ E+AL FS+M +
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGN--------- 234
+ F+ +S+ A TG + K VI + + N
Sbjct: 200 DCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNL 259
Query: 235 --------------TLVDMY---AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
T+V A S ++E+ +K+ + +DVVSW ++L+G AQ+G+
Sbjct: 260 FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMA 319
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
++ F ML +GI P+ V + +L A S G+ + + + G +
Sbjct: 320 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 379
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++L + G L A+K + M + +W +++ A +H
Sbjct: 380 IELYSKCGSLGDAVKLFKGMIVRDV-VIWSSMIAAYGIH 417
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 63/101 (62%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L L++ H++++ + F+ DI + I++ Y+KCG LD AR LFDE KD+V W
Sbjct: 594 CGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCW 653
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
+A+I+ Y + AI LF QM++ G++P+ T + VL A
Sbjct: 654 SAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 694
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 24/281 (8%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+H+ K G + + + L +YA+ + A +F N WN+ + + R+
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 175 EGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS---GGQLVA 230
+ E+ LR F M+ G P +F+ A A LE GK +H K+ G +
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM-- 139
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR- 289
FVG+ LV++Y+K G + +A KVF + D V W SM+TG Q+ + + F +M+
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 290 ---NGIAP--NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
+G P N + L T C F+ M E + + T +
Sbjct: 200 DCFDGDLPLVNSLLNLYAKTGCEKI-----AANLFSKMP----EKDVISWSTMIACYANN 250
Query: 345 GLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELG 382
+ AL EM EP + + L AC + +N+E G
Sbjct: 251 EAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 291
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 337/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + VH +++GS F+ D N +++ YAKCG L A+++FD KD VTW
Sbjct: 332 CGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTW 391
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+GY+Q+ + + F +M+++ KP+ T +L A D GR +H +
Sbjct: 392 NSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLA-DINQGRGIHCDVI 449
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K+G++ + +G+SLLD+YA+ +MDD +F+ + + + +SWN +IA + +
Sbjct: 450 KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQ 509
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+EM EG P + + + QGK +H ++ KSG + +GN L++MY+
Sbjct: 510 MINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E+ KVF + ++DVV+W ++++ +G GK ++ F+ M +G+ P+ V F+
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+ ACSH+G++ EG +F MK + +EP HY VDLL R+GLL +A +FI MP++
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A++WGALL ACR N + +++I EL+ D+G ++L++NIYA+ G+ + R
Sbjct: 690 PDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVR 749
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK G+KKEP SW+E + V++F D + Q + + + + GYV D
Sbjct: 750 NSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQ 809
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L ++ ++ L HSE+LA+AF L++T PGS + + KN+RVCGDCH+ K+ +K++
Sbjct: 810 FALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIM 869
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI+VRD NRFH F+DG CSCGD+W
Sbjct: 870 QREILVRDANRFHRFKDGACSCGDHW 895
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 200/356 (56%), Gaps = 3/356 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ IVH H + F++D+ + N +++ Y++ LD AR +F+EM +D V+W
Sbjct: 131 CARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW 190
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LISGY N E+A+ ++ + G+ P+ FT+SSVL A G+ K G VH
Sbjct: 191 NSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGS-LMAVKEGVAVHGVIE 249
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +V +G+ LL MY +F+++ +A +F+ + K+ V+WN +I G+A+ E +++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ +GF P S +S A +G L+ GK+VH ++I SG + N L+DMYA
Sbjct: 310 LFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A++VF+ +D V+WNS++ G Q G K + F KM++ P+ VTF+
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVL 427
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L+ S +++G+G + K G E E + +D+ + G +D LK M
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 202/410 (49%), Gaps = 4/410 (0%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTAL 64
K + R VH+ I+ S + +++ YA+ + +F + P ++ W ++
Sbjct: 33 KNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSI 92
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I + N A+ +++M L+P+ FT SV+ S A D + G VH ++ G
Sbjct: 93 IRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVIN-SCARILDLELGCIVHEHAMEMG 151
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ ++Y+G++L+DMY+RF +D+A ++F + +++ VSWN+LI+G+ E AL +
Sbjct: 152 FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYH 211
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+ G P F+ SSV A S ++++G VH + K G +GN L+ MY K
Sbjct: 212 KFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFE 271
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ +A +VF+++ +D V+WN+M+ G AQ G +A+V+ F M+ +G P+ ++ +
Sbjct: 272 RLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIR 330
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC +G L G+ + G E + +D+ + G L A + + +
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT 390
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
W +L+ + G + + + DS +LL +I++ +N
Sbjct: 391 -WNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADIN 439
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 10/267 (3%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+P+Q L S L + + A + R VH+ + G +V L+ YA+ +
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSV 74
Query: 150 FLFTALESKNEVS-WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F ++ N V WN++I +AL ++EM + +P F++ SV + A
Sbjct: 75 SVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARI 134
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
LE G VH H ++ G + ++GN L+DMY++ +++A VF + RD VSWNS++
Sbjct: 135 LDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLI 194
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+G +G + + + K G+ P+ T VL AC + EG +++K G+
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIA 254
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIR 355
D++ GLL KF R
Sbjct: 255 G---------DVIIGNGLLSMYFKFER 272
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 192 EPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
EP+ F SS+ L+S + Q + VH+ +I SG L L+ YA+ +
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSV 74
Query: 251 KVFNRLL-KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF + +V WNS++ +GL + ++ +M + P+ TF V+ +C A
Sbjct: 75 SVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSC--A 132
Query: 310 GLLDEGQGYFALMKKHGVEP--EEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+LD G ++ +H +E E Y+ +D+ R LD A EM + +
Sbjct: 133 RILDLELG--CIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVS- 189
Query: 366 WGALL-GAC 373
W +L+ G C
Sbjct: 190 WNSLISGYC 198
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/573 (38%), Positives = 342/573 (59%), Gaps = 10/573 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFK--NDIAMQNTILNAYAKCGCLDEARKLF---DEMPVK 56
C + L+ R +H H+L S + + ++ ++ Y+ CG ++EAR++F DE P +
Sbjct: 80 CISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPE 139
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
+ V W A+ GYS+N A++L+ ML +KP F S LKA + + GR +
Sbjct: 140 EPV-WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKAC-SDLDNALVGRAI 197
Query: 117 HAFCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
HA +K+ + + V ++LL +Y D+ +F + +N VSWN LIAG A +
Sbjct: 198 HAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGR 257
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+ L F M REG + + +++ A +L GK +H ++KS + N+
Sbjct: 258 VFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNS 317
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+DMYAK G I EKVF+R+ +D+ SWN+ML G + +G + F++M+R GI PN
Sbjct: 318 LMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPN 377
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+TF+ +L+ CSH+GL EG+ F+ +M+ GV+P HY VD+LGR+G D AL
Sbjct: 378 GITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVA 437
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
+P+ P+ ++WG+LL +CR++ NV L AER+FE++P++ G +++L+NIYA+AG
Sbjct: 438 ENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWE 497
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKK-WREISEKIKQI 473
D R R+MM +G+KK+ CSW++ K+ +H FVA + + + +KK W E+S +K +
Sbjct: 498 DVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNL 557
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GYVP++ VL +++ + + HSE+LA FALI+T G I I KN+RVC DCHS
Sbjct: 558 GYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWM 617
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SKV R I++RDTNRFHHF +G CSC DYW
Sbjct: 618 KAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 177 EKALRTFSEMLREGFEPTHF-------SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+KALR L E +PT S S A S SLE G+ +H H+++S +++
Sbjct: 50 DKALR-----LIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLHLLRSQNRVL 104
Query: 230 --AFVGNTLVDMYAKSGSIEDAEKVFNRLLKR--DVVSWNSMLTGCAQHGLGKATVRWFE 285
+ L+ +Y+ G + +A +VF ++ + W +M G +++G + +
Sbjct: 105 ENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYR 164
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG--- 342
ML + P F L ACS G+ A + KH V EA V LLG
Sbjct: 165 DMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDV--GEADQVVNNALLGLYV 222
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G D LK EMP + W L+
Sbjct: 223 EIGCFDEVLKVFEEMP-QRNVVSWNTLIAG 251
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/523 (41%), Positives = 321/523 (61%), Gaps = 3/523 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASG 104
A ++F+++ ++ TW +I G+++++ P A+ LFSQM + P+ T + KA
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAV- 146
Query: 105 AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWN 164
A D G +H+ ++ G+D +V +SL+ MY+ F + A+ +F + ++ V+WN
Sbjct: 147 AKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWN 206
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
++I G A +AL + EM EG EP F+ S+ +A G+L G+ VH +++K
Sbjct: 207 SVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKV 266
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
G N L+D+Y+K G+ DA+KVF+ + +R VVSW S++ G A +GLG ++ F
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLF 326
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGR 343
++ R G+ P+++TF+ VL ACSH G+LDEG YF MK+ +G+ P H+ VDLL R
Sbjct: 327 GELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCR 386
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILL 403
AG + A +IR MP+ P A +W LLGAC +H ++ELG A I L+ SG +LL
Sbjct: 387 AGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLL 446
Query: 404 ANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKW 463
+N+YAS R D RK+M GVKK P S VE KN V+ F+ D +HPQ +
Sbjct: 447 SNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAML 506
Query: 464 REISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNI 523
+I++ +K GYVP + +VL+ +++E+E L H+EK+A+AF L++TPPG+ I I KN+
Sbjct: 507 AKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNL 566
Query: 524 RVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
RVC DCH A K SKV EREIIVRD +RFHHF+DG CSC DYW
Sbjct: 567 RVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + F + +QN++++ Y+ G + A ++F+ M +D V W ++I+G++ N
Sbjct: 158 IHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGM 217
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKAS---GAGATDDKFGRQVHAFCLKYGYDWNVY 130
P A+ L+ +M G++P+ FT+ S+L A GA A G +VH + +K G N +
Sbjct: 218 PNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALA----LGERVHMYMVKVGLVQNQH 273
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
++LLD+Y++ DA +F +E ++ VSW +LI G A G +AL+ F E+ R+G
Sbjct: 274 ASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN-TLVDMYAKSGSIEDA 249
+P+ ++ V A + G L++G + + G L + +VD+ ++G + DA
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDA 393
Query: 250 -EKVFNRLLKRDVVSWNSMLTGCAQHG 275
+ + N + + V W ++L C HG
Sbjct: 394 YDYIRNMPVPPNAVIWRTLLGACTIHG 420
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L VH +++ + N +L+ Y+KCG +A+K+FDEM + +V+W
Sbjct: 247 CVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSW 306
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFG--RQVHA 118
T+LI G + N A+ LF ++ R GLKP++ T VL A S G D+ F R++
Sbjct: 307 TSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKE 366
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNAL-----IAGHAR 172
+YG + ++D+ R ++ DA+ ++ N V W L I GH
Sbjct: 367 ---EYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLE 423
Query: 173 KSEGEKA 179
E +A
Sbjct: 424 LGEVARA 430
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 332/574 (57%), Gaps = 34/574 (5%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D T+++ AK G LD+A L P +++++WT LISGYS+ + A+ F+ ML
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVH----------------------AFCLKY 123
G++P++ T+ +L A A D FGR +H A C
Sbjct: 230 SDGIEPDEVTVIGLLSAC-AQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDI 288
Query: 124 GYDWNVYVG----------SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
G W V+ ++++D Y + +D A +LF +E ++ V++N+LI G+
Sbjct: 289 GRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHG 348
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL F +M R +F+ S+ TA AS G+L QG+ +HA + + ++ ++G
Sbjct: 349 GRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLG 408
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
L+DMY K G +E+A VF + RDV +W++M+ G A +G+GKA + +F M +G
Sbjct: 409 TALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQ 468
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALK 352
PN VT++ +LTACSH+ LLDEG+ YF M+ H + P HY +DLLGR+GLLD A+
Sbjct: 469 PNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMD 528
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
+R MP++P A +W ++L ACR+HK+ L AAE + +L+P + ++ L NIY + +
Sbjct: 529 LVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQ 588
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
DA++ R++M+E GVKK S + VH F+ D HPQ I EI+ ++K
Sbjct: 589 WEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKS 648
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
+GY P +S + D++E+E L HSEK+A+AF LIS P +HI KN+RVC DCHSA
Sbjct: 649 VGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSA 708
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K S++ REIIVRD +RFHHFRDG CSC D+W
Sbjct: 709 IKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 184/436 (42%), Gaps = 71/436 (16%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC------LDEARKLFDEMPVKDMV 59
+ +++A +HA ++ S + +LN+ C L A LFD MP +
Sbjct: 10 RSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFL 69
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
TAL + + + PE+ +IL+ +M R G+ + FT + K G + +HA
Sbjct: 70 FDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAA 129
Query: 120 CLKYGYDWNV-YVGSSLLDMY-------------------------------ARFDQMDD 147
C + V V + ++ MY A+ +DD
Sbjct: 130 CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDD 189
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
AW L ++N +SW LI+G++R +A+ F+ ML +G EP + + +A A
Sbjct: 190 AWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQ 249
Query: 208 TGSLEQGKWVHAHV-----IKSGGQLVAFVG---------------------------NT 235
L G+ +H V + SG +VA + N
Sbjct: 250 LKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNA 309
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
++D Y K G ++ A +F+++ RD+V++NS++TG G + + F +M R+ + +
Sbjct: 310 MIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRAD 369
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
T + +LTAC+ G L +G+ A +++ VE + +D+ + G ++ A +
Sbjct: 370 NFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQ 429
Query: 356 EMPIEPTAAVWGALLG 371
M + W A++
Sbjct: 430 AMSVR-DVHTWSAMIA 444
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 130/324 (40%), Gaps = 48/324 (14%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
FD+M + FLF AL A S E L + M R G F++ +
Sbjct: 60 FDRMPCSTFLFD----------TALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFL 109
Query: 202 FTALA-STGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
F A + + +HA ++ V V N ++ MY + G DA + F+ + +
Sbjct: 110 FKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVK 169
Query: 260 DVVSWNSMLTGCAQHGL------------GKATVRW-------------------FEKML 288
D V+W ++++G A+ GL + + W F ML
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
+GI P++VT + +L+AC+ L G+ L+ + G+ V +D+ + G +
Sbjct: 230 SDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIG 289
Query: 349 RALKFIREMPIEPTAAVWGALL-GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIY 407
RA + + W A++ G C++ +V++ Y + +++ D L Y
Sbjct: 290 RAWEVFDALGRGRRPQSWNAMIDGYCKL-GHVDVARYLFD---QMEDRDLVTFNSLITGY 345
Query: 408 ASAGRLNDAARARKMMKESGVKKE 431
GRL +A M+ ++ +
Sbjct: 346 IHGGRLREALLLFMQMRRHDLRAD 369
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + R +HA I + DI + +L+ Y KCG ++EA +F M V+D+ TW
Sbjct: 380 CASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTW 439
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+G + N + A+ F M G +PN T ++L A D+ L
Sbjct: 440 SAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRL 499
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
+ + ++D+ R +D+A L + + N V W ++++
Sbjct: 500 LHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSA 548
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 333/598 (55%), Gaps = 40/598 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ E +HA + + D A+ + AYA LD L P V +
Sbjct: 45 CATLRRTGE---LHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFY 101
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+ I +S A+ L S+ML GL P TLSS L A A GR +HA+
Sbjct: 102 TSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLA----LGRALHAYAF 157
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
K + YV ++LL MYAR FD+M DDA
Sbjct: 158 KLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARE 217
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + SK+ + WNA+I G+ + +ALR F MLR G +P + +A+A G+
Sbjct: 218 LFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGT 277
Query: 211 LEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
E G+W+H++V S QL A VG L+DMY K GS+EDA VFN + +D+V WN+M+
Sbjct: 278 AESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMIN 337
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G A HG + + F ++ G+ P +TF+ +L ACSH+GL+DEG +F M++ + +
Sbjct: 338 GYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIV 397
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P+ HY VDLLGRAGL++ A ++ M I P +W +LL ACR+HKN+ LG A+
Sbjct: 398 PKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADY 457
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+ +SG +ILL+NIYA+ G + AR R MMK SG++KEP CS +E V+ FVA
Sbjct: 458 LVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVA 517
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HP+ I+ +++ +K+ G+VP + VL D+ +E L VHSEKLA+AF L
Sbjct: 518 GDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGL 577
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
IST PG TI I KN+R C DCH+ K SK+ R+I+ RD NRFHHF DG C+CGDYW
Sbjct: 578 ISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 333/598 (55%), Gaps = 40/598 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ E +HA + + D A+ + AYA LD L P V +
Sbjct: 44 CATLRRTGE---LHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFY 100
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+ I +S A+ L S+ML GL P TLSS L A A GR +HA+
Sbjct: 101 TSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLA----LGRALHAYAF 156
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
K + YV ++LL MYAR FD+M DDA
Sbjct: 157 KLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARE 216
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + SK+ + WNA+I G+ + +ALR F MLR G +P + +A+A G+
Sbjct: 217 LFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGT 276
Query: 211 LEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
E G+W+H++V S QL A VG L+DMY K GS+EDA VFN + +D+V WN+M+
Sbjct: 277 AESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMIN 336
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
G A HG + + F ++ G+ P +TF+ +L ACSH+GL+DEG +F M++ + +
Sbjct: 337 GYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIV 396
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P+ HY VDLLGRAGL++ A ++ M I P +W +LL ACR+HKN+ LG A+
Sbjct: 397 PKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADY 456
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+ +SG +ILL+NIYA+ G + AR R MMK SG++KEP CS +E V+ FVA
Sbjct: 457 LVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVA 516
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HP+ I+ +++ +K+ G+VP + VL D+ +E L VHSEKLA+AF L
Sbjct: 517 GDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGL 576
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
IST PG TI I KN+R C DCH+ K SK+ R+I+ RD NRFHHF DG C+CGDYW
Sbjct: 577 ISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 329/564 (58%), Gaps = 11/564 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+++H + D+ + +L+ YAK G L++A K+F MP ++V + A+I+G+ Q
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301
Query: 71 -----NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCLKY 123
++ A+ LF +M G+KP++FT SS+LKA +T + F G+Q+HA KY
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC---STIEAFECGKQIHAQIFKY 358
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ ++G++L+++Y+ ++D F + + VSW +LI GH + + E L F
Sbjct: 359 NLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLF 418
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
E+L G +P F+ S + +A A+ +++ G+ +HA+ IK+G + N+ + MYAK
Sbjct: 419 HELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKC 478
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G I+ A F D+VSW+ M++ AQHG K V FE M +GIAPN +TFL VL
Sbjct: 479 GDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVL 538
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH GL++EG YF +MKK HG+ P H VDLLGRAG L A FI + E
Sbjct: 539 VACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGD 598
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W +LL ACR+HK + G AER+ EL+P + ++LL NIY AG A R +
Sbjct: 599 PVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNL 658
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK+ GVKKEP SW+E N VH FVA D +HP +I+ + E+ E+IK++ Y+ +
Sbjct: 659 MKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVS 718
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
+ + + + + HSEKLA+ F +IS P + + + KN+R C CH K S++ R
Sbjct: 719 DASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENR 778
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EII+RD RFH FRDG CSCGDYW
Sbjct: 779 EIILRDPIRFHRFRDGSCSCGDYW 802
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 250/530 (47%), Gaps = 65/530 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R++HA I S + + N++++ Y KCG +D AR +F+ D V+W
Sbjct: 130 CGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSW 189
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAG-ATDDKFGRQVHAFC 120
+LI+GY + + + L +MLR GL N + L S LKA G+ ++ + G+ +H
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE----- 175
+K G D +V VG++LLD YA+ ++DA +F + N V +NA+IAG +
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 309
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+A+ F EM G +P+ F++SS+ A ++ + E GK +HA + K Q F+GN
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV++Y+ SGSIED K F+ K DVVSW S++ G Q+G + + F ++L +G P+
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429
Query: 296 QVTFLCVLTACS-----------HAGLLDEGQGYFALMK--------------------K 324
+ T +L+AC+ HA + G G F +++ K
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 489
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVEL 381
P+ + + + G A+ M I P + +L AC VE
Sbjct: 490 ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEE 549
Query: 382 GAYAAERIFELDPHDSG--PHI----LLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
G R FE+ D G P++ + ++ AGRL A A + +SG + +P
Sbjct: 550 GL----RYFEIMKKDHGITPNVKHSACIVDLLGRAGRL---AEAESFIMDSGFEGDPV-M 601
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
W +A + A D + ++E++ ++ +S+VL Y
Sbjct: 602 WRSLLSACRVHKATDTG-----------KRVAERVIELEPEAAASYVLLY 640
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 185/363 (50%), Gaps = 8/363 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L ++ H H++ + FK + + N +L Y KCG D A+KLFD MP +++V+W
Sbjct: 30 TRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWN 89
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+LISGY+Q + LF + L+ ++FT S+ L G D + GR +HA
Sbjct: 90 SLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR-TLDLRLGRLIHALITV 148
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G V + +SL+DMY + ++D A +F + + + VSWN+LIAG+ R ++ LR
Sbjct: 149 SGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRL 208
Query: 183 FSEMLREGFEPTHFSYSSVFTALAS--TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+MLR G ++ S A S + S+E GK +H +K G L VG L+D Y
Sbjct: 209 LVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTY 268
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----HGLGKATVRWFEKMLRNGIAPN 295
AK G +EDA K+F + +VV +N+M+ G Q + F +M G+ P+
Sbjct: 269 AKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPS 328
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+ TF +L ACS + G+ A + K+ ++ +E V+L +G ++ LK
Sbjct: 329 EFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFH 388
Query: 356 EMP 358
P
Sbjct: 389 STP 391
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 4/292 (1%)
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
Q LGL + T + +++ S + G+ H +K + +++ ++LL MY +
Sbjct: 9 QPYYLGLPLDSVTYTKLVQCSTRTGSLIH-GKLAHMHMIKTCFKPCLFLLNNLLYMYCKC 67
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+ D A LF + +N VSWN+LI+G+ + + + F E F++S+
Sbjct: 68 GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNAL 127
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ T L G+ +HA + SG + N+L+DMY K G I+ A VF + D V
Sbjct: 128 SVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSV 187
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC--SHAGLLDEGQGYFA 320
SWNS++ G + G +R KMLR+G+ N L AC + + ++ G+
Sbjct: 188 SWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHG 247
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
K G++ + +D + G L+ A K + MP +P ++ A++
Sbjct: 248 CAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G +Y+ + TGSL GK H H+IK+ + F+ N L+ MY K G + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+K+F+R+ KR+VVSWNS+++G Q G + F++ + + ++ TF L+ C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L G+ AL+ G+ + +D+ + G +D A + + E E + W +L
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA-RLVFESADELDSVSWNSL 192
Query: 370 L-GACRMHKNVEL 381
+ G R+ N E+
Sbjct: 193 IAGYVRIGSNDEM 205
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/636 (37%), Positives = 356/636 (55%), Gaps = 80/636 (12%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-----LDEARKLFDEMPVKD 57
T L LK+A HA IL + D + +++ +YA + + ++FD + +
Sbjct: 46 TSLHHLKQA---HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 102
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
+ W +I +N++P AI+L+ +M+ +PN++T +VLKA S +G + G QV
Sbjct: 103 VFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAE--GVQV 160
Query: 117 HAFCLKYGYDWNVYVGSS--------------------------------LLDMYARFDQ 144
HA +K+G + ++ SS ++D Y RF +
Sbjct: 161 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGE 220
Query: 145 MDDAWFLFTAL--------------------------------ESKNEVSWNALIAGHAR 172
++ A LF + + ++E+SW+A+I G+ +
Sbjct: 221 VEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQ 280
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ +AL F +M +E P F SV +A A+ G+L+QG+W+H + ++ QL +
Sbjct: 281 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 340
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
G +LVDMYAK G I+ A +VF ++ ++V SWN+M+ G A HG + + F KM I
Sbjct: 341 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DI 397
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRAL 351
PN++TF+ VL AC+H GL+ +G F M+K +GVEP+ HY VDLLGRAGLL A
Sbjct: 398 YPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 457
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
K + +P EPT AVWGALLGACR H NVELG + + EL+P +SG + LL+NIYA AG
Sbjct: 458 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 517
Query: 412 RLNDAARARKMMKESGVKKEPACSWVET-KNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
R + RK+MKE G+K P S ++ + VH F+ D +HPQ I++ ++ E++
Sbjct: 518 RWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 577
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+ GY PD S VL D++E+E + HSEKLA+ F LI+T PG+TI I KN+RVC DCH
Sbjct: 578 QMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCH 637
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SA K S+V REIIVRD R+HHFR+G CSC D+W
Sbjct: 638 SATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 172/408 (42%), Gaps = 79/408 (19%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--------- 52
C+ + E VHAH++ D + ++ + YA G L EAR++ D+
Sbjct: 148 CSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC 207
Query: 53 -----------------------MPVKDMV-TWTALISGYSQNDQPE------------- 75
MP + M+ TW A+ISG+S+ E
Sbjct: 208 WNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERD 267
Query: 76 ------------------NAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
A+ +F QM + ++P +F L SVL A + GA D GR +
Sbjct: 268 EISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQ--GRWI 325
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H + + + +G+SL+DMYA+ ++D AW +F + +K SWNA+I G A
Sbjct: 326 HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRA 385
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG---QLVAFVG 233
E A+ FS+M P ++ V A A G +++G + + K G Q+ +
Sbjct: 386 EDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHY-- 440
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
+VD+ ++G + +AEKV + + + W ++L C +HG + R K+L
Sbjct: 441 GCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGER-VGKILLELE 499
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
N + + + AG +E LMK+ G++ + +DL
Sbjct: 500 PQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPG--TSIIDL 545
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 192 EPTHFSYSSVFTALAS--TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG----- 244
E + S+ ++ L + T SL K HA ++++G +++ +LV YA
Sbjct: 27 ETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYL 86
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
S E + +VF+ + K +V WN M+ C ++ + + +M+ PN+ T+ VL
Sbjct: 87 SFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLK 146
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS +G++ EG A + KHG+ + + + + G L A + + + E A
Sbjct: 147 ACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 206
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
W A++ VE AA +FE P S
Sbjct: 207 CWNAMIDGYLRFGEVE----AARELFEGMPDRS 235
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 329/560 (58%), Gaps = 5/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+ R +HA + S D + + ++ Y K G ++A KLFD+MP KD+V+W +LISG
Sbjct: 55 ISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISG 114
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+S+ + ++ + +KPN+ T+ S++ A +GA D G+ +H F +K G
Sbjct: 115 FSRCLH-MSLTAFYTMKFEMSVKPNEVTILSMISAC-SGALDA--GKYIHGFGIKVGGTL 170
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V V +SL++MY + + A LF A+ N VSWN++IA + + F++M
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R G E + ++ A G + + +H + +G + L+D YAK G +
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ VF + D V+W +ML G A HGLG+ ++ FE M G+ P+ VTF +L+ACS
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL++EG+ YF +M + +G+EP HY VDLLGR GLL+ A + I+ MP+EP A VW
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLGACR+H N+ELG AE + ++P D +I+L+N+Y+++ DAA+ R ++KE
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+K+ P S +E N H F D +HP+ I+ K E+ KI++ GY + +VL
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDV 530
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+++ +E + HSEKLA+AF L+ + G + I KN+R+CGDCHS K S + +R II+
Sbjct: 531 EEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIII 590
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF DGFCSC DYW
Sbjct: 591 RDPKRFHHFSDGFCSCADYW 610
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
S++ A+ S S+ + +HA V KS F+G+ LV Y K G EDA K+F+ +
Sbjct: 43 SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH 102
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+D+VSWNS+++G ++ L + ++ + PN+VT L +++ACS G LD G+
Sbjct: 103 KDLVSWNSLISGFSR-CLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYI 159
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
K G E + +++ G++G L A + +P +P W +++ A
Sbjct: 160 HGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL K A +H + + F I + +L+ YAK G L + +F E+ D V W
Sbjct: 248 CLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAW 307
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++GY+ + AI LF M GL+P+ T + +L A ++ +
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSE 367
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
YG + V S ++D+ R ++DA+ + + + N W AL+
Sbjct: 368 VYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLG 415
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 338/564 (59%), Gaps = 11/564 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A VH ++ + D+ + + +++ YAK G L EA LF + ++V + A+I+G +
Sbjct: 236 AEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCR 295
Query: 71 NDQP------ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
++ A+ L+S++ G++P +FT SSV++A A D +FG+Q+H LK+
Sbjct: 296 DEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNL-AGDIEFGKQIHGQVLKHC 354
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + ++GS+L+D+Y M+D + F ++ ++ V+W A+I+G + E+AL F
Sbjct: 355 FQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFH 414
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
E+L G +P F+ SSV A AS + G+ + KSG +GN+ + MYA+SG
Sbjct: 415 ELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSG 474
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++E A + F + DVVSW+++++ AQHG + +++F +M+ + PN++TFL VLT
Sbjct: 475 NVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLT 534
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH GL+DEG Y+ +MK ++G+ P H VDLLGRAG L A FIR+
Sbjct: 535 ACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP 594
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
VW +LLG+CR+H+++E G A+RI EL P SG ++ L N+Y AG L+ ++ R +M
Sbjct: 595 VVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLM 654
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
KE GVKKEP SW+E ++ +H FVA D +HP+ I+ K E+ KI ++ S +
Sbjct: 655 KERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDKLTTTDTS--CI 712
Query: 484 SYADQQEREAK-LQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
+ + RE + HSEKLA+A +I P + I + KN+RVC DCHS K SK R
Sbjct: 713 EWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECR 772
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EII+RD RFHHFRDG CSCGDYW
Sbjct: 773 EIILRDVIRFHHFRDGSCSCGDYW 796
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 205/382 (53%), Gaps = 8/382 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +LKE ++VHA + + + N++++ YA+CG + EAR++FD +D V+W
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW 183
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAFC 120
+L+SGY + E + +F+ M R + N F L SV+K SG + VH
Sbjct: 184 NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCV 243
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR------KS 174
+K G D ++++ S+++DMYA+ + +A LF ++ N V +NA+IAG R K
Sbjct: 244 VKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKE 303
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+AL +SE+ G EPT F++SSV A G +E GK +H V+K Q F+G+
Sbjct: 304 VVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGS 363
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+D+Y S +ED + F + K+DVV+W +M++GC Q+ L + + F ++L G+ P
Sbjct: 364 ALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKP 423
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ T V+ AC+ ++ G+ K G + A + + + R+G ++ A++
Sbjct: 424 DPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRF 483
Query: 355 REMPIEPTAAVWGALLGACRMH 376
+EM + W A++ + H
Sbjct: 484 QEMESHDVVS-WSAIISSHAQH 504
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 194/378 (51%), Gaps = 15/378 (3%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD--EARKLFDEMPVKDMVTWTALI 65
L +A VH HI + + ++NT+L AY + G D +AR+L DEMP ++ V++ LI
Sbjct: 26 LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLI 85
Query: 66 SGYSQNDQPENAIILFSQMLRLG-LKPNQFT-LSSVLKASGAGATDDKFGRQVHAFCLKY 123
YS+ Q E ++ F R +K ++FT +++ S AG K G+ VHA +
Sbjct: 86 DAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRL--KEGKVVHALAVLE 143
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G V+V +SL+ MYAR M +A +F E +++VSWN+L++G+ R E+ LR F
Sbjct: 144 GLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVF 203
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQG--KWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ M R F+ SV + +G + VH V+K+G F+ + +VDMYA
Sbjct: 204 ALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYA 263
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA--QHGLGKATVR----WFEKMLRNGIAPN 295
K G++ +A +F +L +VV +N+M+ G + + K VR + ++ G+ P
Sbjct: 264 KRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPT 323
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+ TF V+ AC+ AG ++ G+ + KH + ++ +DL + ++ + R
Sbjct: 324 EFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFR 383
Query: 356 EMPIEPTAAVWGALLGAC 373
+P + W A++ C
Sbjct: 384 SVP-KQDVVTWTAMISGC 400
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 151/276 (54%), Gaps = 5/276 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ + +H +L F+ D + + +++ Y C+++ + F +P +D+VTW
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTW 393
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISG QN+ E A+ LF ++L +GLKP+ FT+SSV+ A + A + G Q+ F
Sbjct: 394 TAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAV-VRTGEQMQCFAT 452
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D +G+S + MYAR ++ A F +ES + VSW+A+I+ HA+ +AL+
Sbjct: 453 KSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQ 512
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F+EM+ P ++ V TA + G +++G + ++K L V + +VD+
Sbjct: 513 FFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYY-EIMKMEYGLCPTVKHCTCVVDL 571
Query: 240 YAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQH 274
++G + DAE + + + + V W S+L C H
Sbjct: 572 LGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIH 607
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 11/262 (4%)
Query: 128 NVYVGSSLLDMYARFDQMD--DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++++ ++LL Y R D A L + +N VS+N LI ++R + E++L TF
Sbjct: 44 SLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLH 103
Query: 186 MLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
R + F+Y++ A + G L++GK VHA + G FV N+LV MYA+ G
Sbjct: 104 AHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCG 163
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ +A +VF+ +RD VSWNS+++G + G + +R F M R + N V+
Sbjct: 164 DMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIK 223
Query: 305 ACSHAGLLDEG--QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
CS G + + K G++ + VD+ + G L A+ + + ++P
Sbjct: 224 CCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSV-LDPN 282
Query: 363 AAVWGALL-GACR----MHKNV 379
V+ A++ G CR +HK V
Sbjct: 283 VVVFNAMIAGLCRDEAAVHKEV 304
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK--SGSIEDAEKVFNRLLKRDVV 262
L S SL Q VH H+ ++ F+ NTL+ Y + +G A ++ + + +R+ V
Sbjct: 20 LRSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAV 79
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
S+N ++ ++ G + ++ F R + ++ T+ L ACS AG L EG+ AL
Sbjct: 80 SFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHAL 139
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ + V + R G + A + + ++ E W +L+
Sbjct: 140 AVLEGLAEGVFVSNSLVSMYARCGDMGEARR-VFDVTEERDDVSWNSLV 187
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 340/558 (60%), Gaps = 6/558 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ + D M +L + +KC +D A ++F ++ +TALI G+ +
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
AI L+S+ML + P+ + ++S+LKA G+ + GR+VH+ LK G+ N V
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALRE-GREVHSRALKLGFSSNRLVRL 176
Query: 134 SLLDMYARFDQMDDAWFLFTALE----SKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
++++Y + ++ DA +F + +K+ V W A+I G R E +AL F M E
Sbjct: 177 RIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGE 236
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
P F+ V +A + G+LE G+WVH+++ K +L FVGN L++MY++ GSI++A
Sbjct: 237 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 296
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+ VF+ + RDV+++N+M++G + +G + + F M+ + P VTF+ VL ACSH
Sbjct: 297 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHG 356
Query: 310 GLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+D G + + ++ + + VEP+ HY VDLLGR G L+ A IR M + P + G
Sbjct: 357 GLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 416
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL AC+MHKN+ELG A+ + + DSG ++LL+++YAS+G+ +AA+ R MKE+G+
Sbjct: 417 LLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGM 476
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
+KEP CS +E N +H F+ D HPQ+ I++K E++ ++ GY P+ VL +
Sbjct: 477 QKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIED 536
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
E+E L +HSE+LA+ + LIST P + I + KN+RVC DCHSA K +K+ R+I+VRD
Sbjct: 537 GEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRD 596
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFH+F +G CSCGDYW
Sbjct: 597 RNRFHYFENGACSCGDYW 614
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 176/341 (51%), Gaps = 20/341 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP----VKD 57
C L+E R VH+ L F ++ ++ I+ Y KCG L +AR++F+EMP KD
Sbjct: 147 CGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKD 206
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
V WTA+I G+ +N++ A+ F M ++PN+FT+ VL A S GA + GR V
Sbjct: 207 TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALE--IGRWV 264
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H++ K+ + N++VG++L++MY+R +D+A +F ++ ++ +++N +I+G + +
Sbjct: 265 HSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKS 324
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH---AHVIKSGGQLVAFVG 233
+A+ F M+ PT+ ++ V A + G ++ G + A + Q+ +
Sbjct: 325 RQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHY-- 382
Query: 234 NTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLR 289
+VD+ + G +E+A + + + D + ++L+ C H LG+ + E
Sbjct: 383 GCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELED--- 439
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
G A + T++ + + +G E A MK+ G++ E
Sbjct: 440 RGQA-DSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKE 479
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ + L + + Q +HA +I++G F+ L+ +K +I+ A ++F +
Sbjct: 42 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 101
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
V + +++ G G ++ + +ML I P+ +L AC L EG+ +
Sbjct: 102 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS 161
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA---AVWGALL 370
K G + ++L G+ G L A + EMP + A W A++
Sbjct: 162 RALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 214
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 333/554 (60%), Gaps = 11/554 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
H I+ F+ D+ +Q +L+ YAK G L A+++F MP +D+V A+IS S++
Sbjct: 33 HCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYV 92
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
E A LF M + N + +S++ + +K WN +
Sbjct: 93 EEARNLFDNMT----ERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWN-----A 143
Query: 135 LLDMYARFDQMDDAWFLFTALES-KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
++D Y + Q+ A LF + S +N V+WN +I+ + + E A+ F +M E +P
Sbjct: 144 IIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKP 203
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T + S+ +A A G+L+ G+W+H ++ ++ +GN L+DMY K G++E A VF
Sbjct: 204 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVF 263
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ L ++++ WNS++ G +G G+ + F M + GI P+ VTF+ +L+ CSH+GLL
Sbjct: 264 HGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLS 323
Query: 314 EGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
GQ YF+ ++ +G+EP HY VDLLGRAG L AL+ IR MP++P + V G+LL A
Sbjct: 324 AGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRA 383
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
C++HK+ +LG +++ ELDP D G ++ L+N+YAS R +D RK+M + GV K P
Sbjct: 384 CQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTP 443
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CS +E N VH FVA D +HPQ I+ EI++++K G+VP++++VL +++E+E
Sbjct: 444 GCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKE 503
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
++ HSE++A+AF L+STPPG TI + KN+R C DCHSA K S +REIIVRD RF
Sbjct: 504 GAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRF 563
Query: 553 HHFRDGFCSCGDYW 566
HHFR+G CSC DYW
Sbjct: 564 HHFRNGSCSCNDYW 577
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 137/270 (50%), Gaps = 12/270 (4%)
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
MLR + P++ + S +L+ S A + + + G H +K G+++++ + + LLD YA+
Sbjct: 1 MLRNDVLPSKTSFSLILR-SCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVG 59
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ A +F + ++ V+ NA+I+ ++ E+A F M E S++S+ T
Sbjct: 60 DLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMT----ERNSCSWNSMIT 115
Query: 204 ALASTGSLEQGKWV-HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDV 261
G + + + + +K +V++ N ++D Y KS + A+++F + R+
Sbjct: 116 CYCKLGDINSARLMFDCNPVK---DVVSW--NAIIDGYCKSKQLVAAQELFLLMGSARNS 170
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
V+WN+M++ Q G + F++M + P +VT + +L+AC+H G LD G+
Sbjct: 171 VTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGY 230
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
++ ++ + +D+ + G L+ A+
Sbjct: 231 IRTKRLKIDVVLGNALIDMYCKCGALEAAI 260
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L +H +I K D+ + N +++ Y KCG L+ A +F + K++ W
Sbjct: 215 CAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 274
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G N + E AI F M + G+KP+ T +L R
Sbjct: 275 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLG 334
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
YG + V ++D+ R + +A L A+ K N + +L+ H GE
Sbjct: 335 VYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGE 394
Query: 178 KALRTFSEM 186
+ + E+
Sbjct: 395 QVTQQLLEL 403
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
MLR P+ S+S + + A +G + G+ H ++K G + + L+D YAK G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQ-VTFLCVL 303
++ A++VF + +RDVV+ N+M++ ++HG + F+ M RN + N +T C L
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKL 120
Query: 304 TACSHAGL-------------------------LDEGQGYFALMKKHGVEPEEAHYVTFV 338
+ A L L Q F LM G + T +
Sbjct: 121 GDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLM---GSARNSVTWNTMI 177
Query: 339 DLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAY 384
+ G A+ ++M ++PT +LL AC +++G +
Sbjct: 178 SAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEW 226
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 340/567 (59%), Gaps = 2/567 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C K L+E R +H + + N +++ Y KCG L EA+++FD M K++ +
Sbjct: 50 RCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFS 109
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L++G+ Q+ + AI LF +M + G P++ L + + GA + GR++H+
Sbjct: 110 WTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQ-GREIHSAA 168
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G D ++ +++++MY + + +A+ +FT + KN +SW+ +IA + ++AL
Sbjct: 169 ASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEAL 228
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M +EG E +Y SV A S G+LE GK +H ++ +G VGNTLV+MY
Sbjct: 229 LFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMY 288
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K GS +DA VF+ +++++VVSWN+ML Q+G + + F+ M G+ PN +TF+
Sbjct: 289 GKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFV 348
Query: 301 CVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L CSH+G + +F M++ G+ P E H+ +D+LGR+G L+ A + I+ MP+
Sbjct: 349 TILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPV 408
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
A +W +LL AC HK+ + A AAE F+ +P + +I+L+N+YA+ + ++AA+
Sbjct: 409 PADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKV 468
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK M+++GV+K+ SW+E VH FVA D HP ++ I K + + +++ GY PD
Sbjct: 469 RKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDR 528
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V+ +++E++ L HSEKLA+AF + STPP + + I KN+RVC DCHSA KF S V
Sbjct: 529 KVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGV 588
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R I VRD+NRFHHF G CSCGDYW
Sbjct: 589 EGRRITVRDSNRFHHFDRGECSCGDYW 615
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/542 (40%), Positives = 321/542 (59%), Gaps = 41/542 (7%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+A NT+++A A+ G + EAR+LF MP K+ V+W+A++SGY + A+ F
Sbjct: 134 DVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECF---- 189
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+A ++ W ++++ Y +F ++
Sbjct: 190 -------------------------------YAAPMRSVITW-----TAMITGYMKFGRV 213
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
+ A LF + + V+WNA+IAG+ E LR F ML G +P S +SV
Sbjct: 214 ELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGC 273
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++ +L+ GK VH V K G +LV MY+K G ++DA ++F ++ ++DVV WN
Sbjct: 274 SNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWN 333
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
+M++G AQHG GK +R F++M + G+ P+ +TF+ VL AC+HAGL+D G YF M++
Sbjct: 334 AMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRD 393
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+E + HY VDLLGRAG L A+ I+ MP +P A++G LLGACR+HKN+ L +
Sbjct: 394 FGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEF 453
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+ + ELDP + ++ LAN+YA+ R + A R+ MK++ V K P SW+E + VH
Sbjct: 454 AAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVH 513
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F ++D HP+ A IH+K +++ +K+K GYVPD VL ++ +E L HSEKLA+
Sbjct: 514 GFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAI 573
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF L+ P G I + KN+RVCGDCHSA K+ S + REIIVRDT RFHHF+DGFCSC D
Sbjct: 574 AFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRD 633
Query: 565 YW 566
YW
Sbjct: 634 YW 635
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 5/222 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L+ + VH + +D ++++ Y+KCG L +A +LF ++P KD+V W
Sbjct: 273 CSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCW 332
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ + A+ LF +M + GLKP+ T +VL A D + +
Sbjct: 333 NAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRR 392
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+G + + ++D+ R ++ +A L ++ K + + G R +
Sbjct: 393 DFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAE 452
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
++ L E +PT ++ + LA+ + Q +W H I+
Sbjct: 453 FAAKNLLE-LDPT---IATGYVQLANVYA-AQNRWDHVASIR 489
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 30/287 (10%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEM----------LREGF--EPTHFSYS-SV 201
+ N ++ N LIA + R + + A+R F +M + F +P HF Y+ +
Sbjct: 36 FNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQL 95
Query: 202 FTALASTGSLEQG-----KWVHAHVIKSGGQLVAF------VGNTLVDMYAKSGSIEDAE 250
F + ++ W H V + G + NT++ A+ G + +A
Sbjct: 96 FEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
++F+ + +++ VSW++M++G G A V F + +T+ ++T G
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSV----ITWTAMITGYMKFG 211
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
++ + F M + A +V+ GRA R + + E ++P A ++L
Sbjct: 212 RVELAERLFQEMSMRTLVTWNAMIAGYVE-NGRAEDGLRLFRTMLETGVKPNALSLTSVL 270
Query: 371 GACRMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASAGRLNDA 416
C ++LG + + + D+ L ++Y+ G L DA
Sbjct: 271 LGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDA 317
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 329/564 (58%), Gaps = 11/564 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+++H + D+ + +L+ YAK G L++A K+F MP ++V + A+I+G+ Q
Sbjct: 163 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 222
Query: 71 -----NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCLKY 123
++ A+ LF +M G+KP++FT SS+LKA +T + F G+Q+HA KY
Sbjct: 223 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC---STIEAFECGKQIHAQIFKY 279
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ ++G++L+++Y+ ++D F + + VSW +LI GH + + E L F
Sbjct: 280 NLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLF 339
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
E+L G +P F+ S + +A A+ +++ G+ +HA+ IK+G + N+ + MYAK
Sbjct: 340 HELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKC 399
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G I+ A F D+VSW+ M++ AQHG K V FE M +GIAPN +TFL VL
Sbjct: 400 GDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVL 459
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
ACSH GL++EG YF +MKK HG+ P H VDLLGRAG L A FI + E
Sbjct: 460 VACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGD 519
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W +LL ACR+HK + G AER+ EL+P + ++LL NIY AG A R +
Sbjct: 520 PVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNL 579
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK+ GVKKEP SW+E N VH FVA D +HP +I+ + E+ E+IK++ Y+ +
Sbjct: 580 MKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVS 639
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
+ + + + + HSEKLA+ F +IS P + + + KN+R C CH K S++ R
Sbjct: 640 DASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENR 699
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EII+RD RFH FRDG CSCGDYW
Sbjct: 700 EIILRDPIRFHRFRDGSCSCGDYW 723
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 250/530 (47%), Gaps = 65/530 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R++HA I S + + N++++ Y KCG +D AR +F+ D V+W
Sbjct: 51 CGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSW 110
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAG-ATDDKFGRQVHAFC 120
+LI+GY + + + L +MLR GL N + L S LKA G+ ++ + G+ +H
Sbjct: 111 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 170
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE----- 175
+K G D +V VG++LLD YA+ ++DA +F + N V +NA+IAG +
Sbjct: 171 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 230
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+A+ F EM G +P+ F++SS+ A ++ + E GK +HA + K Q F+GN
Sbjct: 231 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 290
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV++Y+ SGSIED K F+ K DVVSW S++ G Q+G + + F ++L +G P+
Sbjct: 291 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 350
Query: 296 QVTFLCVLTACS-----------HAGLLDEGQGYFALMK--------------------K 324
+ T +L+AC+ HA + G G F +++ K
Sbjct: 351 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 410
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVEL 381
P+ + + + G A+ M I P + +L AC VE
Sbjct: 411 ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEE 470
Query: 382 GAYAAERIFELDPHDSG--PHI----LLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
G R FE+ D G P++ + ++ AGRL A A + +SG + +P
Sbjct: 471 GL----RYFEIMKKDHGITPNVKHSACIVDLLGRAGRL---AEAESFIMDSGFEGDPV-M 522
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
W +A + A D + ++E++ ++ +S+VL Y
Sbjct: 523 WRSLLSACRVHKATDTG-----------KRVAERVIELEPEAAASYVLLY 561
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 158/313 (50%), Gaps = 8/313 (2%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
MP +++V+W +LISGY+Q + LF + L+ ++FT S+ L G D +
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR-TLDLRL 59
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
GR +HA G V + +SL+DMY + ++D A +F + + + VSWN+LIAG+ R
Sbjct: 60 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS--TGSLEQGKWVHAHVIKSGGQLVA 230
++ LR +MLR G ++ S A S + S+E GK +H +K G L
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----HGLGKATVRWFE 285
VG L+D YAK G +EDA K+F + +VV +N+M+ G Q + F
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+M G+ P++ TF +L ACS + G+ A + K+ ++ +E V+L +G
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 346 LLDRALKFIREMP 358
++ LK P
Sbjct: 300 SIEDGLKCFHSTP 312
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
+ +N VSWN+LI+G+ + + + F E F++S+ + T L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH 274
+ +HA + SG + N+L+DMY K G I+ A VF + D VSWNS++ G +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC--SHAGLLDEGQGYFALMKKHGVEPEEA 332
G +R KMLR+G+ N L AC + + ++ G+ K G++ +
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+D + G L+ A K + MP +P ++ A++
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 219
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 333/567 (58%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + A++ H+ + + D + ++N Y + G L+EA K+F+E+P+K+ V W
Sbjct: 123 CFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIW 182
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I G+ + LFS+M R G + + F + +++A G K G+ H C+
Sbjct: 183 GVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACG-NVYAGKEGKTFHGLCI 241
Query: 122 KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
K + D N ++ +SL+DMY + +D A LF + ++ V W+A+IAG AR +++
Sbjct: 242 KKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESI 301
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML + P +++S+ A +S GSL+QG+ VH ++I++G +L + +DMY
Sbjct: 302 SMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMY 361
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G I A +VF ++ +++V SW++M+ G HGL + F +M PN VTF+
Sbjct: 362 AKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFV 421
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH+G ++EG +F M + +G+ P E HY VDLLGRAG +D AL FI MP
Sbjct: 422 SVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPT 481
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP A+ WGALLGACR+H+ EL A+++ L+ SG +++L+NIYA G +
Sbjct: 482 EPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKT 541
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R M E G+ K + +E + +++F + D + I W + E+++++GYVPD
Sbjct: 542 RLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDL 601
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL D + ++ L HSEKLA+ F L+++ G I I KN+RVCGDCH+A KF S +
Sbjct: 602 RFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLI 661
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R+II+RD RFHH +DG CSCGDYW
Sbjct: 662 TRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 210/429 (48%), Gaps = 11/429 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K L ++A IL +A + I AY + G L A K F+ + +++ +W ++
Sbjct: 26 KTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTIL 85
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ +S+N + + LF +ML+ G + F L +KA G + + + H+ +K
Sbjct: 86 ASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKAC-FGLSLFQGAKLFHSLAIKLRL 144
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + YV +L+++Y +++A +F + KN V W +I GH SE FS
Sbjct: 145 EGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSR 204
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSG 244
M R GFE F + A + + ++GK H IK F+ +LVDMY K G
Sbjct: 205 MRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCG 264
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ A K+F + RDVV W++++ G A++G ++ F +ML + + PN VTF ++
Sbjct: 265 FLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVL 324
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
ACS G L +G+ M ++GVE + +Y +F+D+ + G + A + ++P E
Sbjct: 325 ACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVF 383
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIYAS---AGRLNDA-ARA 419
W ++ MH L A A +E+ + P+ + ++ ++ +GR+ + +
Sbjct: 384 SWSTMINGFGMHG---LCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHF 440
Query: 420 RKMMKESGV 428
+ M ++ G+
Sbjct: 441 KSMSRDYGI 449
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
T +L ++A ++ + G + Y + GS+ A K FN + ++ SWN++
Sbjct: 25 TKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTI 84
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
L +++ ++ F++ML+ G + + + AC L + + +L K +
Sbjct: 85 LASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRL 144
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA- 386
E + +++ G L+ A K E+P++ + +WG ++ ++ + E G +
Sbjct: 145 EGDPYVAPALMNVYTELGSLEEAHKVFEEVPLK-NSVIWGVMIKG-HLNFSEEFGVFELF 202
Query: 387 ERI----FELDP 394
R+ FELDP
Sbjct: 203 SRMRRSGFELDP 214
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/570 (38%), Positives = 340/570 (59%), Gaps = 7/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C + ++ R +HA +L S D + +++ YA CG + AR+LFDEMP + ++
Sbjct: 73 CVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFL 132
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W LI Y+++ E AI L+ +ML G ++P+ FT VLKA A D GR+VH
Sbjct: 133 WNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAA-LLDLGAGREVHDR 191
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++ + +V+V + L+DMYA+ +D+AW +F + ++ V WN++IA + +A
Sbjct: 192 VMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEA 251
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L M EG PT + S +A A G+L +G+ +H + + G + +L+DM
Sbjct: 252 LALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDM 311
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN--GIAPNQV 297
YAKSG + A +F++L R+++SWN+M+ G HG F +M RN + P+ +
Sbjct: 312 YAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRM-RNEAQVMPDHI 370
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TF+ VL+AC+H G++ E + F LM + ++P HY VD+LG +G A I+
Sbjct: 371 TFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKG 430
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
M ++P + +WGALL C++HKNVEL A ++ EL+P D+G ++LL+NIYA +G+ +A
Sbjct: 431 MLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEA 490
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
AR RK+M G+KK ACSW+E K H F+ D +HP+ I+++ + I Q GYV
Sbjct: 491 ARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYV 550
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
PD++ V + E+ ++ HSE+LA+AF LISTPPG+ + + KN+RVC DCH K
Sbjct: 551 PDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLI 610
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++ +REII+RD NR+HHF +G CSC D+W
Sbjct: 611 SQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
H +Y+++ + + ++ G+ +HA ++ SG L A + LVD+YA G + A ++F
Sbjct: 62 NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121
Query: 254 NRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGL 311
+ + + +V WN ++ A+ G +A + + +ML G + P+ T+ VL AC A L
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKAC--AAL 179
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVT--FVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
LD G G + +V +D+ + G +D A + A VW ++
Sbjct: 180 LDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNSM 238
Query: 370 LGAC 373
+ AC
Sbjct: 239 IAAC 242
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/576 (40%), Positives = 352/576 (61%), Gaps = 16/576 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK K + +H L ++++ N ++ YA+ G L+E RK+F MP D V+W
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 62 TALISGYSQNDQ--PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++I +++++ PE A++ F R G K N+ T SSVL A + + + G+Q+H
Sbjct: 485 NSIIGALARSERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE-LGKQIHGL 542
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEK 178
LK ++L+ Y + +MD +F+ + E ++ V+WN++I+G+ K
Sbjct: 543 ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK 602
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL ML+ G F Y++V +A AS +LE+G VHA +++ + VG+ LVD
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQV 297
MY+K G ++ A + FN + R+ SWNSM++G A+HG G+ ++ FE M +G P+ V
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TF+ VL+ACSHAGLL+EG +F M +G+ P H+ D+LGRAG LD+ FI +
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 357 MPIEPTAAVWGALLGAC-RMH-KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
MP++P +W +LGAC R + + ELG AAE +F+L+P ++ ++LL N+YA+ GR
Sbjct: 783 MPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 842
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
D +ARK MK++ VKKE SWV K+ VHMFVA D +HP +I+KK +E++ K++ G
Sbjct: 843 DLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI----STPPGSTIHIKKNIRVCGDCH 530
YVP + L +Q+ +E L HSEKLA+AF L ST P I I KN+RVCGDCH
Sbjct: 903 YVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP---IRIMKNLRVCGDCH 959
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SAFK+ SK+ R+II+RD+NRFHHF+DG CSC D+W
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 153/284 (53%), Gaps = 10/284 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
AR H+ + + D+ + N ++NAY + G ARK+FDEMP+++ V+W ++SGYS+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
N + + A++ M++ G+ NQ+ SVL+A G+ FGRQ+H K Y +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 130 YVGSSLLDMYAR-FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V + L+ MY + + A F +E KN VSWN++I+ +++ + A R FS M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 189 EGFEPTHFSYSSVFTALASTGS-----LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+G PT +++ S+ T S LEQ + + KSG FVG+ LV +AKS
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
GS+ A KVFN++ R+ V+ N ++ G + G+ + F M
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 173/363 (47%), Gaps = 7/363 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+ I S D+ + + +++A+AK G L ARK+F++M ++ VT L+ G +
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 74 PENAIILFSQM-LRLGLKPNQFT--LSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNV 129
E A LF M + + P + LSS + S A K GR+VH + G D+ V
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+G+ L++MYA+ + DA +F + K+ VSWN++I G + +A+ + M R
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
P F+ S ++ AS + G+ +H +K G L V N L+ +YA++G + +
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 250 EKVFNRLLKRDVVSWNSMLTGCA--QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
K+F+ + + D VSWNS++ A + L +A V F R G N++TF VL+A S
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV-CFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+ G+ L K+ + E + G+ G +D K M W
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 368 ALL 370
+++
Sbjct: 589 SMI 591
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 11/269 (4%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
R H+ K D +VY+ ++L++ Y A +F + +N VSW +++G++R
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ--GKWVHAHVIKSGGQLVAF 231
E ++AL +M++EG +++ SV A GS+ G+ +H + K + A
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 232 VGNTLVDMYAKS-GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V N L+ MY K GS+ A F + ++ VSWNS+++ +Q G ++ R F M +
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 291 GIAPNQVTF-LCVLTACS----HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
G P + TF V TACS LL++ ++K G+ + V ++G
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 346 LLDRALKFIREMPIEPTAAVWGALLGACR 374
L A K +M + G ++G R
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVR 286
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 347/560 (61%), Gaps = 11/560 (1%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
H ++L S F ND N ++N+Y + ++A +LF+EM +++++T+L++G+ + +P
Sbjct: 50 HTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRP 109
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
++A+++F +ML + PN FT ++V+ A A D + G+++H+ +G N+ V SS
Sbjct: 110 KSALLIFCKMLESWVLPNAFTFATVVNACSMLA-DLRTGQKIHSHVEMFGVQCNLVVCSS 168
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF--- 191
L+DMY + + +DDA +F ++ +N VSW ++I + + + GE AL+ F E G
Sbjct: 169 LIDMYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREF--NGLPLS 226
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P HF +SV A AS G L GK HA VI+ G + V + LVDMYAK G I ++K
Sbjct: 227 SPNHFMLASVINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDK 286
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF R+ V+ + SM+ G A++GLGK ++ F++ML I PN VTF+ VL ACSH+GL
Sbjct: 287 VFRRIPDPSVIPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGL 346
Query: 312 LDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT--AAVWGA 368
+D+G Y ++ KKHGV P+ HY VD+LGR G LD A + + + +EP A +WG
Sbjct: 347 VDDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGT 406
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL A R++ V++ A++ + E + + ++ ++N YA AG+ + R MK GV
Sbjct: 407 LLSASRLYGRVDIAVEASKWLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGV 466
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQR-AMIHKKWREISEKIKQIGYVPDSSHVLSY-A 486
KEP CSWVE +++ ++F A D + R + + RE+ ++K+ GYV S ++S
Sbjct: 467 YKEPGCSWVEIRDSAYVFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDV 526
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+++ +E + +HSE+LALAF LIS P G TI + KN+R+C DCH AFK S++VER+ +V
Sbjct: 527 EEEAKEEIVGLHSERLALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVV 586
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFHHF +G C+C D+W
Sbjct: 587 RDVNRFHHFENGSCTCRDFW 606
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ + +H+H+ + ++ + +++++ Y KC +D+AR++FD M +++V+W
Sbjct: 138 CSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDARRVFDGMDYRNVVSW 197
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T++I+ Y QN E A+ LF + L L PN F L+SV+ A A G+ HA
Sbjct: 198 TSMITAYGQNALGECALQLFREFNGLPLSSPNHFMLASVINAC-ASLGRLVSGKVAHAAV 256
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G++ N V S+L+DMYA+ + + +F + + + + ++I G A+ G+ +L
Sbjct: 257 IRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSVIPYTSMIVGAAKYGLGKFSL 316
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDM 239
F EML +P ++ V A + +G ++ G +++H+ K G +VDM
Sbjct: 317 DIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHGVVPDTKHYTCVVDM 376
Query: 240 YAKSGSIEDAEKVFNRLL---KRDVVSWNSMLTGCAQHG 275
++G +++A ++ + + + W ++L+ +G
Sbjct: 377 LGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYG 415
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 110/226 (48%), Gaps = 11/226 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +L ++ HA ++ +++ + + +++ YAKCGC+ + K+F +P ++ +
Sbjct: 240 CASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSVIPY 299
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
T++I G ++ + ++ +F +ML +KPN T VL A S +G DD +H+
Sbjct: 300 TSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGL-EYLHSMH 358
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE---SKNEVSWNALIAGHARKSEGE 177
K+G + + ++DM R ++D+A L +++ + + W L++ +
Sbjct: 359 KKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYGRVD 418
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
A+ S+ L E + +Y ++ A GKW + H I+
Sbjct: 419 IAVEA-SKWLIESNQQVAAAYVTMSNTYAMA-----GKWENVHSIR 458
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/600 (38%), Positives = 344/600 (57%), Gaps = 37/600 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + A+ +HA I+ S + NT+L+AY KC L +A LFDEMP +D V+W
Sbjct: 12 CTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSW 71
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHA-F 119
++++ Y+Q P + +F M L+P+ F +++LKA A + G+QVHA F
Sbjct: 72 ASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKAC-ASLCSLRLGKQVHARF 130
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
L D +V V SSL+DMYA+ A +F ++ K VSW A+++G+AR ++A
Sbjct: 131 VLSPFVDDDV-VKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEA 189
Query: 180 ----LRT---------------------------FSEMLREGFEPTH-FSYSSVFTALAS 207
LRT F EM REG + SSV A A+
Sbjct: 190 MELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACAN 249
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
L GK +H VI SG + F+ N LVDMYAK I A VFNR+L RDVVSW S+
Sbjct: 250 LAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSI 309
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHG 326
+ G AQHG K + +++M+ I PN+VTF+ ++ ACSHAGL+ +G+ F A+++ +
Sbjct: 310 IVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYR 369
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+ P + F+DLL R+G L+ A I+ MP +P W ALL AC+ H N E+G A
Sbjct: 370 ISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIA 429
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+R+ L+ H+ ++LL+N+YA AG+ +R RK+M + VK++P S ++ +F
Sbjct: 430 DRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVF 489
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
A + HP + I +E+ ++++ GY+PD+S+VL ++QE+E +L HSE+ A+A+
Sbjct: 490 HAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAY 549
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
L+ PG+ I I KN+R+CGDCH+ K S +V +EIIVRD R+HHF+DG CSC D+W
Sbjct: 550 GLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 320/523 (61%), Gaps = 3/523 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASG 104
A ++F+++ ++ TW +I G+++++ P A+ LFSQM + P+ T + KA
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAV- 146
Query: 105 AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWN 164
A D G +H+ ++ G+D +V +SL+ MY+ + A+ +F + ++ V+WN
Sbjct: 147 AKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWN 206
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
++I G A +AL + EM EG EP F+ S+ +A G+L G+ VH +++K
Sbjct: 207 SVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKV 266
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
G N L+D+Y+K G+ DA+KVF+ + +R VVSW S++ G A +GLG ++ F
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLF 326
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGR 343
++ R G+ P+++TF+ VL ACSH G+LDEG YF MK+ +G+ P H+ VDLL R
Sbjct: 327 GELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCR 386
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILL 403
AG + A +IR MP+ P A +W LLGAC +H ++ELG A I L+ SG +LL
Sbjct: 387 AGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLL 446
Query: 404 ANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKW 463
+N+YAS R D RK+M GVKK P S VE KN V+ F+ D +HPQ +
Sbjct: 447 SNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAML 506
Query: 464 REISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNI 523
+I++ +K GYVP + +VL+ +++E+E L H+EK+A+AF L++TPPG+ I I KN+
Sbjct: 507 AKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNL 566
Query: 524 RVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
RVC DCH A K SKV EREIIVRD +RFHHF+DG CSC DYW
Sbjct: 567 RVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ + F + +QN++++ Y+ G L A ++F+ M +D V W ++I+G++ N
Sbjct: 158 IHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGM 217
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKAS---GAGATDDKFGRQVHAFCLKYGYDWNVY 130
P A+ L+ +M G++P+ FT+ S+L A GA A G +VH + +K G N +
Sbjct: 218 PNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALA----LGERVHMYMVKVGLVQNQH 273
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
++LLD+Y++ DA +F +E ++ VSW +LI G A G +AL+ F E+ R+G
Sbjct: 274 ASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN-TLVDMYAKSGSIEDA 249
+P+ ++ V A + G L++G + + G L + +VD+ ++G + DA
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDA 393
Query: 250 -EKVFNRLLKRDVVSWNSMLTGCAQHG 275
+ + N + + V W ++L C HG
Sbjct: 394 YDYIRNMPVPPNAVIWRTLLGACTIHG 420
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L VH +++ + N +L+ Y+KCG +A+K+FDEM + +V+W
Sbjct: 247 CVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSW 306
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFG--RQVHA 118
T+LI G + N A+ LF ++ R GLKP++ T VL A S G D+ F R++
Sbjct: 307 TSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKE 366
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNAL-----IAGHAR 172
+YG + ++D+ R ++ DA+ ++ N V W L I GH
Sbjct: 367 ---EYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLE 423
Query: 173 KSEGEKA 179
E +A
Sbjct: 424 LGEVARA 430
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 54/260 (20%)
Query: 215 KWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
K +HA I+ G Q F + + + + S + A ++FN++ ++ +WN+M+ G A
Sbjct: 52 KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111
Query: 273 QHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG----- 326
+ V F +M + I P+ TF + A + + G+G +++ ++G
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171
Query: 327 -VEPEEAHYVTFVDLLGRA-------------------------GLLDRALKFIREM--- 357
V+ H + + L A G+ + AL REM
Sbjct: 172 FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSE 231
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYA-AERI--------FELDPHDSGPHILLANIYA 408
+EP +LL AC VELGA A ER+ + H S L ++Y+
Sbjct: 232 GVEPDGFTMVSLLSAC-----VELGALALGERVHMYMVKVGLVQNQHASNA---LLDLYS 283
Query: 409 SAGRLNDAARARKMMKESGV 428
G DA + M+E V
Sbjct: 284 KCGNFRDAQKVFDEMEERSV 303
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 333/566 (58%), Gaps = 15/566 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + +H+H + S ++ ++ I N Y KCG L+ A +F++M K+ V WT ++ G
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q ++ +A+ LF++M+ G++ +++ S VLKA AG + FGRQ+H +K G +
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC-AGLEELNFGRQIHGHIVKLGLES 245
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V VG+ L+D Y + ++ A F + N+VSW+ALI G+ + E E+AL+TF +
Sbjct: 246 EVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLR 305
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV--GNTLVDMYAKSGS 245
+ F+Y+S+F A ++ G HA IKS LVA+ + ++ MY++ G
Sbjct: 306 TRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKS--SLVAYQHGESAMITMYSRCGR 363
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ A +VF + D V+W +++ G A G ++ F +M G+ PN VTF+ VLTA
Sbjct: 364 LDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTA 423
Query: 306 CSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSH+GL+ EG+ Y M +GV HY VD+ RAG L AL+ IR MP P A
Sbjct: 424 CSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAM 483
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
W LLG C ++N+E+G AAE +F+LDP D+ +IL+ N+YAS G+ +AA RKMM
Sbjct: 484 SWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMA 543
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
E ++KE +CSW+ K VH F+ D HPQ I+ K +++ + + + + +L+
Sbjct: 544 ERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSV-----IKEETGLLT 598
Query: 485 YADQQ----EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
D ER+ +L VHSE+LALAF LISTP + + + KN+R C DCH K S +
Sbjct: 599 EEDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLIT 658
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD+ RFHHF+ G CSC DYW
Sbjct: 659 GREIVVRDSFRFHHFKLGECSCNDYW 684
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 185/375 (49%), Gaps = 10/375 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +K L + R+ H + + ++N++L Y KCG L +ARK+FDEM +++V+W
Sbjct: 20 CGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFT----LSSVLKASGAGATDDKFGRQVH 117
+IS Y++N + +FS ML L KPN T L S+L SG + G+Q+H
Sbjct: 80 NTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGL-----EIGKQIH 134
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+ ++ G N V +++ +MY + ++ A +F + KN V+W ++ G+ +
Sbjct: 135 SHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQM 194
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
AL F++M+ EG E + +S V A A L G+ +H H++K G + VG LV
Sbjct: 195 DALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLV 254
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
D Y K ++E A K F + + + VSW++++TG Q G + ++ FE + + N
Sbjct: 255 DFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSF 314
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T+ + ACS + G A K + + + + R G LD A + +
Sbjct: 315 TYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESI 374
Query: 358 PIEPTAAVWGALLGA 372
+P A W A++
Sbjct: 375 D-DPDAVAWTAIIAG 388
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
++ +S+L MY + + DA +F + +N VSWN +I+ +A +K FS ML
Sbjct: 46 FLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLEL 105
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
+P +Y +L + LE GK +H+H I+SG A V + +MY K G +E A
Sbjct: 106 ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA 165
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
E VF ++ +++ V+W ++ G Q + F KM+ G+ ++ F VL AC+
Sbjct: 166 ELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGL 225
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L+ G+ + K G+E E + VD + L+ A K E EP W AL
Sbjct: 226 EELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAF-EWISEPNDVSWSAL 284
Query: 370 L-GACRM 375
+ G C+M
Sbjct: 285 ITGYCQM 291
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G + SY +F A SL G+ H + ++ F+ N+++ MY K GS+ DA
Sbjct: 5 GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
KVF+ + +R++VSWN++++ A++G+ F ML PN T++ L + +
Sbjct: 65 RKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNP 124
Query: 310 GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW-GA 368
L+ G+ + + G+ + ++ + G L+ A + + E E A W G
Sbjct: 125 SGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA-ELVFEKMSEKNAVAWTGI 183
Query: 369 LLGACRMHKNVELGAYAAERI---FELDPH 395
++G + + ++ A A+ + ELD +
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEY 213
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L HA + S+ ++ ++ Y++CG LD A ++F+ + D V W
Sbjct: 323 CSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAW 382
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
TA+I+GY+ A+ LF +M G++PN T +VL A S +G + GRQ + +
Sbjct: 383 TAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIE--GRQYLESM 440
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG 169
YG + ++D+Y+R + +A L ++ S + +SW L+ G
Sbjct: 441 SSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/567 (38%), Positives = 335/567 (59%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H L + +H + L F + + N + +YAKCG L A+++F + K + +W
Sbjct: 155 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 214
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++Q++ P ++ QM GL P+ FT+ S+L A + + G++VH F +
Sbjct: 215 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC-SKLKSLRLGKEVHGFII 273
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + +++V S+L +Y ++ LF A+E K+ VSWN +I G+ + ++AL
Sbjct: 274 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 333
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ G + S VF A + SL G+ HA+ +K + AF+ +L+DMYA
Sbjct: 334 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 393
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K+GSI + KVFN L ++ SWN+M+ G HGL K ++ FE+M R G P+ +TFL
Sbjct: 394 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 453
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFI-REMPI 359
VLTAC+H+GL+ EG Y MK G++P HY +D+LGRAG LD+AL+ + EM
Sbjct: 454 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 513
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
E +W +LL +CR+H+N+E+G A ++FEL+P ++LL+N+YA G+ D +
Sbjct: 514 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 573
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+ M E ++K+ CSW+E V FV + I W + KI ++GY PD+
Sbjct: 574 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 633
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V ++E+ +L+ HSEKLAL + LI T G+TI + KN+R+C DCH+A K SKV
Sbjct: 634 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 693
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+EREI+VRD RFHHF++G CSCGDYW
Sbjct: 694 MEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 182/377 (48%), Gaps = 4/377 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +++ + VH + ++ + N +++ Y+KCGC+ A+ +F K++V+W
Sbjct: 52 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 111
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ G+S + QML G +K ++ T+ + + + +++H +
Sbjct: 112 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL-KELHCY 170
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK + +N V ++ + YA+ + A +F + SK SWNALI GHA+ ++ +
Sbjct: 171 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 230
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L +M G P F+ S+ +A + SL GK VH +I++ + FV +++ +
Sbjct: 231 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 290
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y G + + +F+ + + +VSWN+++TG Q+G + F +M+ GI ++
Sbjct: 291 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 350
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ V ACS L G+ A KH +E + + +D+ + G + ++ K +
Sbjct: 351 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK- 409
Query: 360 EPTAAVWGALLGACRMH 376
E + A W A++ +H
Sbjct: 410 EKSTASWNAMIMGYGIH 426
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 158 KNEVSWNALIAGHARKSEGEKALRTFSEMLRE----GFEPTHFSYSSVFTALASTGSLEQ 213
+N VSWN++I + E++ EM+ E F P + +V A +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
GK VH +K + N L+DMY+K G I +A+ +F ++VVSWN+M+ G +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 274 HGLGKATVRWFEKMLRNG--IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
G T +ML G + ++VT L + C H L + K E
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
FV + G L A + + T W AL+G
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGG 220
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 328/560 (58%), Gaps = 5/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+ R +HA + S D + + ++ Y K G ++A KLFD+MP KD+V+W +LISG
Sbjct: 55 ISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISG 114
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+S+ + ++ + +KPN+ T+ S++ A GA D G+ +H F +K G
Sbjct: 115 FSRCLH-MSLTAFYTMKFEMSVKPNEVTILSMISACN-GALDA--GKYIHGFGIKVGGTL 170
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V V +SL++MY + + A LF A+ N VSWN++IA + + F++M
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R G E + ++ A G + + +H + +G + L+D YAK G +
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLS 290
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ VF + D V+W +ML G A HGLG+ ++ FE M G+ P+ VTF +L+ACS
Sbjct: 291 ASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACS 350
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL++EG+ YF +M + +G+EP HY VDLLGR GLL+ A + I+ MP+EP A VW
Sbjct: 351 HSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLGACR+H N+ELG AE + ++P D +I+L+N+Y+++ DAA+ R ++KE
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKER 470
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+K+ P S +E N H F D +HP+ I+ K E+ KI++ GY + +VL
Sbjct: 471 GLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDV 530
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+++ +E + HSEKLA+AF L+ + G + I KN+R+CGDCHS K S + +R II+
Sbjct: 531 EEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIII 590
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD RFHHF DGFCSC DYW
Sbjct: 591 RDPKRFHHFSDGFCSCADYW 610
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK 258
S++ A+ S S+ + +HA V KS F+G+ LV Y K G EDA K+F+ +
Sbjct: 43 SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH 102
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+D+VSWNS+++G ++ L + ++ + PN+VT L +++AC+ G LD G+
Sbjct: 103 KDLVSWNSLISGFSR-CLHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYI 159
Query: 319 FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
K G E + +++ G++G L A + +P +P W +++ A
Sbjct: 160 HGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL K A +H + + F I + +L+ YAK G L + +F E+ D V W
Sbjct: 248 CLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAW 307
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++GY+ + AI LF M GL+P+ T + +L A ++ +
Sbjct: 308 TAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSE 367
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
YG + V S ++D+ R ++DA+ + + + N W AL+
Sbjct: 368 VYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLG 415
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/567 (38%), Positives = 335/567 (59%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H L + +H + L F + + N + +YAKCG L A+++F + K + +W
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 464
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++Q++ P ++ QM GL P+ FT+ S+L A + + G++VH F +
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC-SKLKSLRLGKEVHGFII 523
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + +++V S+L +Y ++ LF A+E K+ VSWN +I G+ + ++AL
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ G + S VF A + SL G+ HA+ +K + AF+ +L+DMYA
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 643
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K+GSI + KVFN L ++ SWN+M+ G HGL K ++ FE+M R G P+ +TFL
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFI-REMPI 359
VLTAC+H+GL+ EG Y MK G++P HY +D+LGRAG LD+AL+ + EM
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
E +W +LL +CR+H+N+E+G A ++FEL+P ++LL+N+YA G+ D +
Sbjct: 764 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 823
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+ M E ++K+ CSW+E V FV + I W + KI ++GY PD+
Sbjct: 824 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 883
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V ++E+ +L+ HSEKLAL + LI T G+TI + KN+R+C DCH+A K SKV
Sbjct: 884 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 943
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+EREI+VRD RFHHF++G CSCGDYW
Sbjct: 944 MEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 172/375 (45%), Gaps = 10/375 (2%)
Query: 6 KKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
K ++ R +H + GS +ND + I+ YA CG D++R +FD + K++ W A+
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 65 ISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
IS YS+N+ + + F +M+ L P+ FT V+KA AG +D G VH +K
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC-AGMSDVGIGLAVHGLVVKT 216
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +V+VG++L+ Y + DA LF + +N VSWN++I + E++
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 184 SEMLRE----GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
EM+ E F P + +V A + GK VH +K + N L+DM
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQV 297
Y+K G I +A+ +F ++VVSWN+M+ G + G T +ML G + ++V
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T L + C H L + K E FV + G L A + +
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 358 PIEPTAAVWGALLGA 372
T W AL+G
Sbjct: 457 R-SKTVNSWNALIGG 470
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 182/377 (48%), Gaps = 4/377 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +++ + VH + ++ + N +++ Y+KCGC+ A+ +F K++V+W
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ G+S + QML G +K ++ T+ + + + +++H +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL-KELHCY 420
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK + +N V ++ + YA+ + A +F + SK SWNALI GHA+ ++ +
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L +M G P F+ S+ +A + SL GK VH +I++ + FV +++ +
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y G + + +F+ + + +VSWN+++TG Q+G + F +M+ GI ++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ V ACS L G+ A KH +E + + +D+ + G + ++ K +
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK- 659
Query: 360 EPTAAVWGALLGACRMH 376
E + A W A++ +H
Sbjct: 660 EKSTASWNAMIMGYGIH 676
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/559 (22%), Positives = 232/559 (41%), Gaps = 70/559 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + VH ++ + D+ + N +++ Y G + +A +LFD MP +++V+W
Sbjct: 197 CAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSW 256
Query: 62 TALISGYSQNDQPENAIILFSQMLRL----GLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++I +S N E + +L +M+ P+ TL +VL A + G+ VH
Sbjct: 257 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC-AREREIGLGKGVH 315
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+ +K D + + ++L+DMY++ + +A +F +KN VSWN ++ G + + +
Sbjct: 316 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 375
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALAST---GSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ML G E ++ A+ L K +H + +K V N
Sbjct: 376 GTFDVLRQMLAGG-EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 434
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
V YAK GS+ A++VF+ + + V SWN+++ G AQ + ++ +M +G+ P
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL------- 347
+ T +L+ACS L G+ + ++ +E + Y++ + L G L
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 348 ------------------------DRALKFIREMP---IEPTAAVWGALLGACRMHKNVE 380
DRAL R+M I+ + GAC + ++
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 381 LG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES---------- 426
LG AYA + + E D + L ++YA G + +++ +KE
Sbjct: 615 LGREAHAYALKHLLEDDAFIACS---LIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671
Query: 427 -----GVKKEPACSWVETKNAVH-----MFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
G+ KE + E + H F+ A +IH+ R + + G
Sbjct: 672 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Query: 477 PDSSHVLSYADQQEREAKL 495
P+ H D R +L
Sbjct: 732 PNLKHYACVIDMLGRAGQL 750
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV-GSSLLDMYARFDQMDDAWFLFTA 154
L +L+ASG D + GR++H N V + ++ MYA DD+ F+F A
Sbjct: 87 LGLLLQASGK-RKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQ 213
L SKN WNA+I+ ++R ++ L TF EM+ P HF+Y V A A +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G VH V+K+G FVGN LV Y G + DA ++F+ + +R++VSWNSM+ +
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 274 HGLGKATVRWFEKML-RNG---IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
+G + + +M+ NG P+ T + VL C+ + G+G K ++
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E +D+ + G + A + I +M W ++G
Sbjct: 326 ELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/547 (39%), Positives = 331/547 (60%), Gaps = 9/547 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+A N ++N Y G +++A +LF +MP +D+++WT++I G +N + A+ F M+
Sbjct: 184 DVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMV 243
Query: 86 RL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV--YVGSSLLDMYARF 142
G+ + TL L A+ A D G Q+H K+G+ + +V +SL+ YA
Sbjct: 244 GFSGVGISSTTLVCGLSAA-AKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASC 302
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+M DA +F KN V W AL+ G + +AL FSEM+R P S++S
Sbjct: 303 KRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSAL 362
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ LE+G+ +HA IK G + + GN+LV MY+K G I DA VF + +++VV
Sbjct: 363 NSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVV 422
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ---GYF 319
SWNS++ GCAQHG G + F++MLR G+ +++T +L+ACS +G+L + + GYF
Sbjct: 423 SWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYF 482
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
A +K ++ HY VD+LGR G ++ A MP+E + VW LL ACR+H ++
Sbjct: 483 A--RKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSL 540
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
++ AA+RIFE++P S ++LL+N+YAS+ R + AR R MK +G+ K+P SW+
Sbjct: 541 DVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITL 600
Query: 440 KNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
K H F++ D +HP I++K + K++++GY+PD L + ++ E L HS
Sbjct: 601 KGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHS 660
Query: 500 EKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
E+LA+AF L+ST GSTI I KN+RVCGDCH+A +K+V REI+VRD++RFHHF++G
Sbjct: 661 ERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGI 720
Query: 560 CSCGDYW 566
CSCGDYW
Sbjct: 721 CSCGDYW 727
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 176/382 (46%), Gaps = 23/382 (6%)
Query: 4 HLK--KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMV 59
HLK KL AR V I +++ +L AYA L EA LF+++P KD +
Sbjct: 67 HLKNQKLDSARAVFNKIPSP----HVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTI 122
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++I + A+ LF +M + N + ++++ + ++ R +A
Sbjct: 123 SWNSVIKASIICNDFVTAVKLFDEMP----QRNSISWTTIIHGFLSTGRVNEAERFFNA- 177
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ Y D +V +++++ Y +++DA LF + S++ +SW ++I G R + +A
Sbjct: 178 -MPY-VDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQA 235
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSL---EQGKWVHAHVIKSG--GQLVAFVGN 234
L F M+ GF S +++ L++ + G +H + K G L FV
Sbjct: 236 LFFFKNMV--GFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSA 293
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+LV YA + DA KVF + ++VV W ++LTGC + + F +M+R + P
Sbjct: 294 SLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVP 353
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N+ +F L +C L++G+ A K G+E + V + + G + AL
Sbjct: 354 NESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVF 413
Query: 355 REMPIEPTAAVWGALLGACRMH 376
+ + E W +++ C H
Sbjct: 414 KGI-CEKNVVSWNSVIVGCAQH 434
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L++ R++HA + +N + N+++ Y+KCG + +A +F + K++V+W
Sbjct: 365 CVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSW 424
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G +Q+ A++LF +MLR G++ ++ TL+ +L A K F
Sbjct: 425 NSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFAR 484
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
K V + ++D+ R ++++A L T++ + N + W L++ H+ E
Sbjct: 485 KRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAE 544
Query: 178 KALRTFSEM 186
+A + EM
Sbjct: 545 RAAKRIFEM 553
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/533 (39%), Positives = 321/533 (60%), Gaps = 4/533 (0%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFT 95
YAKCG + RK+FDEM KD+V WTA+I+ Y Q ++PE A+ILF +M + GL +
Sbjct: 2 YAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIA 61
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
+ SV A G D K VH + + + VG+S+L M+ + + A +F +
Sbjct: 62 VVSVASAVGQ-LGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
++ +SWN++++G+ + + +AL F EM +PT + + +A A G G+
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSMLTGCAQ 273
H ++ S ++ + N L+DMYAK G +E A +FN + +R+ SWN +++G
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
HG GK + F +M G+ PN TF +L+ACSHAGL+DEG+ FA MK+ V E+ H
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKH 300
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
+ VD+LGRAGLL A I+EMP P+ VWGALL AC++H N+ELG AA + +L+
Sbjct: 301 HACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLE 360
Query: 394 PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAH 453
P+ +G ++L++NIYA++ + + + R+ MK G+KK A S +E + F D +
Sbjct: 361 PNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQEN 420
Query: 454 PQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPP 513
P R ++KK ++ ++K GYVPD S L +++++E L HSEKLA+AF ++ P
Sbjct: 421 PYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDP 480
Query: 514 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
G I + KN+RVC DCHSAFK+ S + +R+IIVRD NRFHHF+ G CSC DYW
Sbjct: 481 GMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 150/283 (53%), Gaps = 9/283 (3%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L +K A VH + + ++ + N+IL + KCG ++AR +FD M +D+++W +
Sbjct: 71 QLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNS 130
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
++SGY+QN Q A++LF +M +P T + ++ ++ A GR+ H F +
Sbjct: 131 MLSGYTQNGQATEALLLFDEMRDSDCQPTPVT-ALIMVSACAYLGFRHLGRKFHDFIVDS 189
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALR 181
+ + + ++L+DMYA+ ++ A LF + +N SWN LI+G+ G++AL
Sbjct: 190 RMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALE 249
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS M EG EP HF+++S+ +A + G +++G+ A + + L +VDM
Sbjct: 250 LFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLG 309
Query: 242 KSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHG---LGKA 279
++G +++A + + D V W ++L C HG LGK
Sbjct: 310 RAGLLQEAFDLIKEMPSPPSDGV-WGALLLACKIHGNMELGKT 351
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 141/300 (47%), Gaps = 9/300 (3%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHF 196
MYA+ D +F + +K+ V W A+I + + + E+AL F +M + EG
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ SV +A+ G ++ VH + + VGN+++ M+ K G+ E A VF+ +
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
++RDV+SWNSML+G Q+G + F++M + P VT L +++AC++ G G+
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACRM 375
+ + +E + +D+ + G L++A+ + P E A W L+ M
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 376 HKNVELGAYAAERIFELDPHDSGP-HILLANIYAS---AGRLNDAARARKMMKESGVKKE 431
H + G A E + P H +I ++ AG +++ + MK V E
Sbjct: 241 HGH---GKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLE 297
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMV 59
C +L R H I+ S + D + N +++ YAKCG L++A LF+ +P ++
Sbjct: 170 CAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAG 229
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+W LISGY + + A+ LFS+M G++PN FT +S+L A S AG D+ GR+ A
Sbjct: 230 SWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDE--GRKCFA 287
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALES-KNEVSWNALIAGHARKSEGE 177
+ + ++DM R + +A+ L + S ++ W AL+ E
Sbjct: 288 EMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNME 347
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
S +L+ EP H Y + + + + + + W +K+ G
Sbjct: 348 LGKTAASNLLQ--LEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKG 394
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/564 (39%), Positives = 322/564 (57%), Gaps = 2/564 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+++ R H + + + F + N +L Y +C +++A K+F+ + D + +
Sbjct: 120 NVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNS 179
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I+GY Q + ++ + M K + + +VL A D G QVHA LK
Sbjct: 180 MINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVL-GHCASMKDSVLGAQVHAQALKK 238
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ NVYVGS+L+DMY + D + DA F L KN VSW A++ + + E AL+ F
Sbjct: 239 RLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLF 298
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M EG +P F+Y+ + A +L G + A V+K+G V N L++MY+KS
Sbjct: 299 LDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKS 358
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GSIEDA +VF + RDVVSWN ++TG A HGL + + F ML + P+ VTF+ VL
Sbjct: 359 GSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVL 418
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+AC+ GL+DE Y +MK+ G+ P + HY V LL R G LD A +FI I
Sbjct: 419 SACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTD 478
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
W +LL +C+++KN LG AE+I +L+P D G ++LL+N+YA A R + + RK
Sbjct: 479 VVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKH 538
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M+E V+K P SW+ + VH+F + + HPQ I KK E+ ++IK IGYVP+ + V
Sbjct: 539 MRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVV 598
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L D + +E L HSEKLALAF LI TP G+TIHI KN+R+C DCH A K S V R
Sbjct: 599 LHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSR 658
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
+I+VRD RFH G CSC DYW
Sbjct: 659 KIVVRDAVRFHCIEGGICSCNDYW 682
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 187/364 (51%), Gaps = 8/364 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + + +HA ++ +A D+ + N +++ YAKCG + AR +FD MP ++ V+ L+SG
Sbjct: 27 LSKGKALHARLITAA-HFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 68 YSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Y+ + + + ++ Q+LR+ N++ LS+ + A+ A GRQ H + +K G+
Sbjct: 86 YASSGRHKESL----QLLRVVDFGMNEYVLSAAVSAT-ANVRSYDMGRQCHGYAVKAGFA 140
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
YV +++L MY + M+DA +F ++ + ++N++I G+ + + + +L M
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNM 200
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
E + + SY +V AS G VHA +K +L +VG+ LVDMY K +
Sbjct: 201 TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHV 260
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA + F L +++VVSW +++T Q+ L + ++ F M G+ PN+ T+ L +C
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L G A + K G +++ ++G ++ A + MP+ + W
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVS-W 379
Query: 367 GALL 370
++
Sbjct: 380 NLII 383
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 165/308 (53%), Gaps = 11/308 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +K VHA L + ++ + + +++ Y KC + +A + F+ +P K++V+W
Sbjct: 219 CASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSW 278
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++ Y+QN+ E+A+ LF M G++PN+FT + L S AG + G + A +
Sbjct: 279 TAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALN-SCAGLAALRTGNALGACVM 337
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ ++ V ++L++MY++ ++DA +F ++ ++ VSWN +I G+A + +
Sbjct: 338 KTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGME 397
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F ML P++ ++ V +A A G +++ + ++K G T +V +
Sbjct: 398 AFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLL 457
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCA---QHGLGKATVRWFEKMLRNGIAPNQ 296
+ G +++AE+ + N + DVV+W S+L C +GLG R E++L+ + P+
Sbjct: 458 CRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGH---RVAEQILQ--LEPSD 512
Query: 297 VTFLCVLT 304
V +L+
Sbjct: 513 VGTYVLLS 520
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 107/275 (38%), Gaps = 47/275 (17%)
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
G L +GK +HA +I + + N L+ YAK G + A VF+ + R+ VS N ++
Sbjct: 25 GDLSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83
Query: 269 TGCAQHGLGK-------------------------ATVRWFEK-------MLRNGIAPNQ 296
+G A G K A VR ++ ++ G A +
Sbjct: 84 SGYASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQR 143
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
F VL +++ F + + ++D G LD +L +R
Sbjct: 144 YVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLD----RGQLDGSLGIVRN 199
Query: 357 MPIEPTA---AVWGALLGACRMHKNVELG----AYAAERIFELDPHDSGPHILLANIYAS 409
M E + A+LG C K+ LG A A ++ EL+ + L ++Y
Sbjct: 200 MTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSA---LVDMYGK 256
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
++DA RA +++ E V A T+N ++
Sbjct: 257 CDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELY 291
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/531 (42%), Positives = 313/531 (58%), Gaps = 8/531 (1%)
Query: 43 LDEARKLFDEMP-VKDMVTWTALISGYSQNDQPENA-----IILFSQMLRLGLKPNQFTL 96
L AR++FD + D V + L+ GY+++ ++ + +F +ML G+ P+ +T
Sbjct: 77 LAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTF 136
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
S+LKA A A + GRQ HA +K G + YV +L++MYA A F +
Sbjct: 137 VSLLKACAA-ARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRAD 195
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
VS+NA+IA R S +AL F EM +G PT + SV +A A G+L+ G+W
Sbjct: 196 GDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRW 255
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H +V K G + V LVDMYAK GS+EDA VF + RD +W+ M+ A HG
Sbjct: 256 LHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGY 315
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
G+ + FE+M + G+ P+ +TFL +L ACSH+GL+ EG YF MK HG+ P HY
Sbjct: 316 GREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGC 375
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
DLL R+G L+RA KFI E+PI PT +W LL AC H +VELG ERI ELD
Sbjct: 376 VTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSH 435
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
G +++ +N+ A+ G + R RK+M + GV K P CS +E N VH F A D HP+
Sbjct: 436 GGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKS 495
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSY-ADQQEREAKLQVHSEKLALAFALISTPPGS 515
K E+ +++K +GY+PD+SHV ++E+ L+ HSEKLA+AF L++T PG+
Sbjct: 496 QEARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGA 555
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
T+ + KN+RVC DCHS KF S V R II+RD NRFHHF G CSCGDYW
Sbjct: 556 TLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/517 (40%), Positives = 326/517 (63%), Gaps = 3/517 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L E R VHA ++ + ++ + + ++ Y +CG LD+AR + D MP + +V+W
Sbjct: 20 CIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +ISGYSQ ++ A+ LF +MLR G PN++TL++VL S +G G+QVH+ +
Sbjct: 80 TTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL-TSCSGPQSIYQGKQVHSLLV 138
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K ++ +++VGSSLLDMYA+ + + +A +F L ++ VS A+I+G+A+K E+AL
Sbjct: 139 KTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALD 198
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ EG + H +++++ TAL+ SL+ GK VHA +++ + N+L+DMY+
Sbjct: 199 LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYS 258
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + + +VF+ +L+R VVSWN+ML G +HGLG + F K L + P+ VT L
Sbjct: 259 KCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLA 317
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+ CSH GL+DEG F ++K+ HY +DLLGR+G L++AL I MP E
Sbjct: 318 VLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 377
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
T ++WG+LLGACR+H NV +G A+++ E++P ++G +++L+NIYA+AG D + R
Sbjct: 378 STPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVR 437
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M E V KEP SW+ +H F +++ HP + I+ K +EI IK G+VPD S
Sbjct: 438 KLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLS 497
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
VL D +++E L HSEKLA+ F L++TPPG TI
Sbjct: 498 CVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTI 534
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + TA +L +G+ VHA +I + + F+G LV MY + G+++DA V +R+
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R VVSW +M++G +Q + F KMLR G PN+ T VLT+CS + +G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+L+ K E + +D+ ++ + A + +P
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 327/566 (57%), Gaps = 40/566 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L +++ +H+H ++D+ + +++ YAKCG L EA++LF M +D+V W
Sbjct: 119 CSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G S ++A+ L QM G+ PN T+ VL CL
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ---------------CL 223
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+YAR +F + +NEVSW+A+I G+ ++AL
Sbjct: 224 ----------------LYARK--------IFDVMGVRNEVSWSAMIGGYVASDCMKEALD 259
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M G +P + V A + +L+ G H ++I G + N L+DMY+
Sbjct: 260 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 319
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G I A +VFNR+ + D+VSWN+M+ G HGLG + F +L G+ P+ +TF+C
Sbjct: 320 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 379
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L++CSH+GL+ EG+ +F A+ + + P H + VD+LGRAGL+D A FIR MP E
Sbjct: 380 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 439
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W ALL ACR+HKN+ELG +++I L P +G +LL+NIY++AGR +DAA R
Sbjct: 440 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 499
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+ G+KK P CSW+E VH FV D +H Q + I++K E+ ++K++GY + S
Sbjct: 500 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 559
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V +++E+E L HSEKLA+AF +++ G I + KN+RVCGDCH+A KF + +
Sbjct: 560 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLIT 619
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI VRD NRFHHF++G C+CGD+W
Sbjct: 620 KREITVRDANRFHHFKNGTCNCGDFW 645
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 168/370 (45%), Gaps = 42/370 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L EA+ +H H L + D ++ + + Y C + AR+LFDE+P ++ W
Sbjct: 18 CIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILW 77
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+I Y+ N + AI L+ ML LG++PN++T VLKA SG A +D G ++H+
Sbjct: 78 NQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED--GVEIHSHA 135
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+G + +V+V ++L+D YA+ + +A LF+++ ++ V+WNA+IAG + + A+
Sbjct: 136 KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAV 195
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ +M EG P +T+V +
Sbjct: 196 QLIMQMQEEGICPN--------------------------------------SSTIVGVL 217
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ A K+F+ + R+ VSW++M+ G K + F M +GI P+ T L
Sbjct: 218 PTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTML 277
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH L G + G + +D+ + G + A + M
Sbjct: 278 GVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 337
Query: 361 PTAAVWGALL 370
+ W A++
Sbjct: 338 DIVS-WNAMI 346
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 19/300 (6%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+Y + A + SL + K +H H +K+ + V + L +Y + A ++F+ +
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
V+ WN ++ A +G + + ML G+ PN+ T+ VL ACS +++G
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ K G+E + VD + G+L A + M A W A++ C ++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLY 188
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
L A + I ++ P+ + I ARK+ GV+ E SW
Sbjct: 189 G---LCDDAVQLIMQMQEEGICPNS--STIVGVLPTCQCLLYARKIFDVMGVRNE--VSW 241
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
+ +VA+D K+ +I ++ G PD + +L A LQ
Sbjct: 242 ---SAMIGGYVASD--------CMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQ 290
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/524 (40%), Positives = 316/524 (60%), Gaps = 5/524 (0%)
Query: 46 ARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA 105
AR LFD M D+V + ++ GYS++ P LF ++L L P+ +T S+LKA
Sbjct: 84 ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAV 143
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
++ GRQ+H +K G D NVYV +L++MY + +D A +F + V +NA
Sbjct: 144 AKALEE-GRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNA 202
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+I G+AR++ +AL F EM + +P + SV ++ A GSL+ GKW+H + K G
Sbjct: 203 MITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHG 262
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
V L+DM+AK GS++DA +F + +D +W++M+ A HG + ++ FE
Sbjct: 263 FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFE 322
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRA 344
+M + P+++TFL +L ACSH GL++EG+ YF+ ++ + G+ P HY + VDLLGRA
Sbjct: 323 RMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRA 382
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
G L+ A +FI ++PI PT +W LL AC H N+EL +ERI ELD G +++L+
Sbjct: 383 GHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILS 442
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
N+YA + RK+MK+ K P CS +E N VH F + D +H+
Sbjct: 443 NLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 502
Query: 465 EISEKIKQIGYVPDSSHVLSYAD--QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKN 522
E+ +++K GYVPD+S V+ +AD QE+E L+ HSEKLA+AF L++TPPG+TI + KN
Sbjct: 503 EMVKELKLAGYVPDTSMVV-HADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKN 561
Query: 523 IRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+RVC DCHSA K S + R++++RD RFHHF DG CSC D+W
Sbjct: 562 LRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/537 (40%), Positives = 332/537 (61%), Gaps = 25/537 (4%)
Query: 44 DEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML---------RLGLKPNQF 94
+++R LFDE+P + +V+WT++I+G QND+ +A+ +F ++L G+ +
Sbjct: 30 NDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSV 89
Query: 95 TLSSVLKASGA----GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
L V+ A G T+ VH +K G++ V VG++L+D YA+F +M A
Sbjct: 90 LLGCVVSAFSKLGWRGVTEG-----VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK- 143
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + + WN++IA +A+ +A F +M++ G +F Y++V +G+
Sbjct: 144 VFDGMNESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG----NFRYNAVIMDXGLSGA 199
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L+ GK +H VIK + FVG ++VD+Y K +E A K F+ + ++V SW +M+ G
Sbjct: 200 LQLGKCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAG 259
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEP 329
HG K + F KM+R+G+ PN +TF+ VL ACSHAG+L EG +F MK + VEP
Sbjct: 260 YGMHGRAKEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEP 319
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY+ VDLLGRAG L I+EM +P +WG+LLGACR+HKNVELG +A ++
Sbjct: 320 GIEHYLCMVDLLGRAGYL-XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKL 378
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
FELD + G ++LL+NIYA AGR ++ R R +MK G+ K P S VE K +H+ +
Sbjct: 379 FELDXSNCGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVG 438
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D HPQ I++ + + K++++GY+P+ + VL D++E+ L+VHSEKLA+AF ++
Sbjct: 439 DKEHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIM 498
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ PGS IHI KN+R+CGDC+ K KVV REI+VRD+ RFHHF++G CSCGDYW
Sbjct: 499 NSVPGSIIHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 171/343 (49%), Gaps = 26/343 (7%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH ++ F+ + + NT+++AYAK G + A K+FD M D W ++I+ Y+QN
Sbjct: 110 VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNESDHYFWNSVIAEYAQNGL 168
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVG 132
A +F M++ G F ++V+ G +GA + G+ +H +K + +V+VG
Sbjct: 169 SAEAFSVFGDMVKSG----NFRYNAVIMDXGLSGAL--QLGKCIHHQVIKMDLEDSVFVG 222
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+S++D+Y + ++++ A F ++ KN SW A++AG+ ++A+ F +M+R G +
Sbjct: 223 TSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIRSGVK 282
Query: 193 PTHFSYSSVFTALASTGSLEQGK-WVH----AHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
P + ++ SV A + G L++G W + +++ G + +VD+ ++G +
Sbjct: 283 PNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYL----CMVDLLGRAGYLX 338
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHG---LGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ K D + W S+L C H LG+ + R ++ N ++ +
Sbjct: 339 CYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFEL----DXSNCGYYVLLSN 394
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+ AG DE + LMK G+ +A + V+L GR +L
Sbjct: 395 IYADAGRWDEVERMRILMKSRGL--LKAPGFSIVELKGRIHVL 435
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 12/120 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + +H ++ ++ + + +I++ Y KC ++ ARK FD M VK++ +WTA+++G
Sbjct: 200 LQLGKCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAG 259
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y + + + A+ +F +M+R G+KPN T SVL A HA LK G W
Sbjct: 260 YGMHGRAKEAMEIFYKMIRSGVKPNYITFVSVLAACS------------HAGMLKEGXHW 307
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 331/576 (57%), Gaps = 33/576 (5%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F D +Q+ ++ YA CG + +AR LFD+M +D+VTW +I GYSQN ++ + L+
Sbjct: 147 FHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYE 206
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR- 141
+M G +P+ L +VL A A A + +G+ +H F G+ ++ +SL++MYA
Sbjct: 207 EMKTSGTEPDAIILCTVLSAC-AHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANC 265
Query: 142 ---------FDQM---------------------DDAWFLFTALESKNEVSWNALIAGHA 171
+DQ+ DA F+F + K+ V W+A+I+G+A
Sbjct: 266 GAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYA 325
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ +AL+ F+EM R P + SV +A A+ G+L Q KW+H + K+G
Sbjct: 326 ESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLP 385
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
+ N L+DMYAK G++ A +VF + +++V+SW+SM+ A HG + + F +M
Sbjct: 386 INNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQN 445
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
I PN VTF+ VL ACSHAGL++EGQ +F+ ++ +H + P+ HY VDL RA L +A
Sbjct: 446 IEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKA 505
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
++ I MP P +WG+L+ AC+ H +ELG +AA R+ EL+P G ++L+NIYA
Sbjct: 506 MELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKE 565
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
R +D RK+MK GV KE ACS +E N VH+F+ D H Q I+KK + ++
Sbjct: 566 KRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQL 625
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
K +GY P +S +L +++E++ + HSEKLAL + LI S I I KN+R+C DCH
Sbjct: 626 KLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCH 685
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S K SKV EI++RD RFHHF G CSC DYW
Sbjct: 686 SFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 196/430 (45%), Gaps = 39/430 (9%)
Query: 6 KKLKEARIVHAHILGSAFKND-----IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
K L+ + +HA IL S N + LD A LF +P
Sbjct: 23 KTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTRF 82
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
L+ +S+ PEN + L+ + R G ++F+ +LKA + + G ++H
Sbjct: 83 SNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALN-LGLEIHGLA 141
Query: 121 LKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K+G+ + ++ S+L+ MYA ++ DA FLF + ++ V+WN +I G+++ + +
Sbjct: 142 SKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHV 201
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L+ + EM G EP +V +A A G+L GK +H + +G ++ + + +LV+M
Sbjct: 202 LKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNM 261
Query: 240 -------------------------------YAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
YAK G ++DA +F+R++++D+V W++M+
Sbjct: 262 YANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMI 321
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+G A+ ++ F +M R I P+Q+T L V++AC++ G L + + K+G
Sbjct: 322 SGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFG 381
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
+D+ + G L +A + MP W +++ A MH + + R
Sbjct: 382 RTLPINNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDADSAIALFHR 440
Query: 389 IFELDPHDSG 398
+ E + +G
Sbjct: 441 MKEQNIEPNG 450
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 55/374 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV------ 55
C H L + +H I + F+ +Q +++N YA CG + AR+++D++P
Sbjct: 227 CAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVS 286
Query: 56 -------------------------KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
KD+V W+A+ISGY+++ QP A+ LF++M R +
Sbjct: 287 TAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIV 346
Query: 91 PNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+Q T+ SV+ A + GA + +H + K G+ + + ++L+DMYA+ + A
Sbjct: 347 PDQITMLSVISACANVGALVQ--AKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAR 404
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + KN +SW+++I A + + A+ F M + EP ++ V A + G
Sbjct: 405 EVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAG 464
Query: 210 SLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVS 263
+E+G+ ++ H I + +VD+Y ++ + A ++ + +V+
Sbjct: 465 LVEEGQKFFSSMINEHRISPQREHYG----CMVDLYCRANHLRKAMELIETMPFPPNVII 520
Query: 264 WNSMLTGCAQHG---LGK-ATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGY 318
W S+++ C HG LG+ A R E + P+ L VL+ + D+
Sbjct: 521 WGSLMSACQNHGEIELGEFAATRLLE------LEPDHDGALVVLSNIYAKEKRWDDVGLV 574
Query: 319 FALMKKHGVEPEEA 332
LMK GV E+A
Sbjct: 575 RKLMKHKGVSKEKA 588
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 333/576 (57%), Gaps = 53/576 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQ-NDQ--PENAIILFSQMLRLG-LKPNQFTLSS 98
+D AR +F +MP + W ++ ++ ND+ A++LFS ML G +KPN+FT S
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 99 VLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA---- 154
VLKA A A+ + G+Q+H +K+G+ + +V S+L+ MY M+DA+ LF
Sbjct: 128 VLKAC-ARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 155 -------------------------------------------LESKNEVSWNALIAGHA 171
+ ++ VSWN +I+G+A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYA 246
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ +A+ F EM +P + + SV A+A G+LE GKW+H + K+ ++
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDV 306
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
+G+ LVDMY+K GSI++A +VF L KR+ ++W++++ A HG + + F M + G
Sbjct: 307 LGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ PN V ++ +L+ACSHAGL++EG+ +F+ ++K G++P HY VDLLGRAG L+ A
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
+ IR MPIEP +W ALLGAC+MHKN+++G AE + EL PHDSG ++ L+N+YAS
Sbjct: 427 EELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
G AR R MK ++K+P CSW+E +H F+ DD+H + I E+S K+
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+ GY P++ V D+QER LQ HSEK+A+AF LIST P + I KN+R+C DCH
Sbjct: 547 RSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCH 606
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ K S + +R+IIVRD RFH F G CSC DYW
Sbjct: 607 ASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 148/274 (54%), Gaps = 9/274 (3%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ + N +++ + G + A+ LFDEMP + +V+W +ISGY+QN AI LF +M
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 86 RLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
+ PN TL SVL A + GA + G+ +H + K + + +GS+L+DMY++
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALE--LGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGS 320
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D+A +F L +N ++W+A+I A E A+ F M + G P +Y + +A
Sbjct: 321 IDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 205 LASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVF-NRLLKRDV 261
+ G +E+G+ +H++K G + G +VD+ ++G +E+AE++ N ++ D
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYG-CMVDLLGRAGHLEEAEELIRNMPIEPDD 439
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
V W ++L C H K R E ++ +AP+
Sbjct: 440 VIWKALLGACKMHKNLKMGERVAETLME--LAPH 471
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 53/319 (16%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHAR 172
+Q+HA +K G + + ++ A + +D A +F + N WN ++ A
Sbjct: 36 KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAE 95
Query: 173 KSE---GEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
++ +AL FS ML +G +P F++ SV A A L +GK +H ++K G
Sbjct: 96 TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHE 155
Query: 229 VAFVGNTLVDMY-----------------------------------------------A 241
FV + LV MY
Sbjct: 156 DEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQV 215
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G I+ A+ +F+ + +R VVSWN M++G AQ+G + F++M + I PN VT +
Sbjct: 216 RLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVS 275
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL A + G L+ G+ K+ +E ++ VD+ + G +D AL+ +P +
Sbjct: 276 VLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLP-KR 334
Query: 362 TAAVWGALLGACRMHKNVE 380
A W A++GA MH E
Sbjct: 335 NAITWSAIIGAFAMHGRAE 353
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + +H + + + D + + +++ Y+KCG +DEA ++F+ +P ++ +TW+A+I
Sbjct: 286 LELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGA 345
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLK-YGY 125
++ + + E+AII F M + G+ PN +L A S AG ++ GR + +K G
Sbjct: 346 FAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEE--GRSFFSHMVKVVGL 403
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGEKALR 181
+ ++D+ R +++A L + ++V W AL+ H GE+
Sbjct: 404 QPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAE 463
Query: 182 TFSEM 186
T E+
Sbjct: 464 TLMEL 468
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 340/561 (60%), Gaps = 3/561 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E + +++ + ++D+ + N+ +N + G L +AR+LF++M +D+VTW +I+
Sbjct: 223 LSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITF 282
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN+ A+ LF ++ + G+K N T +L + + K G+ +H + GYD
Sbjct: 283 YVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAK-GKVIHELVKEAGYDR 341
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V V ++L+ +Y R + AW +F + SK+ ++W + +A+ ++AL+ F EM
Sbjct: 342 DVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ 401
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG PT + +V A +L++G+ +H+H+I++G ++ V L++MY K G +
Sbjct: 402 LEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMA 461
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ KRD++ WNSML AQHG T++ F +M +G + V+F+ VL+A S
Sbjct: 462 EARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALS 521
Query: 308 HAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP-IEPTAAV 365
H+G + +G YF A+++ + P Y VDLLGRAG + A+ + ++ P +
Sbjct: 522 HSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGIL 581
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W LLGACR H + AAE++ E DP SG +++L+N+YA+AG + R RK+M+
Sbjct: 582 WMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRS 641
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKKEP S +E N VH F+ D +HP+R I+ + ++ +++ GY+PD+ +L
Sbjct: 642 RGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHD 701
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+ + +E L HSE+LA+AF L+STPPG+ + + KN+RVC DCH+A K+ SK+ REI+
Sbjct: 702 VEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREIL 761
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRDT+RFH+F+DG CSC DYW
Sbjct: 762 VRDTHRFHNFKDGRCSCKDYW 782
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 213/454 (46%), Gaps = 42/454 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C+ K + R VH H+ F+ + + ++ YA+CG + EA+++F+ + KD+
Sbjct: 14 RCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFA 73
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT +I Y Q + A+ +F QM + P + T ++L A A K G ++H
Sbjct: 74 WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNAC-ASTESLKDGMEIHGQI 132
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L+ G++ +V+VG++L++MY + + AW F LE ++ VSW A+IA + + A
Sbjct: 133 LQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALAR 192
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ M +G P + +VF A L +GK++++ V + V N+ ++M+
Sbjct: 193 WLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMF 252
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+G + DA ++F ++ RDVV+WN ++T Q+ VR F ++ ++GI N +TF+
Sbjct: 253 GNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFV 312
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA---------------- 344
+L + L +G+ L+K+ G + + + L GR
Sbjct: 313 LMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK 372
Query: 345 ---------------GLLDRALKFIREMPIE---PTAAVWGALLGAC----RMHKNVELG 382
G AL+ +EM +E PT+A A+L C + K ++
Sbjct: 373 DVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIH 432
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
++ E F + + L N+Y G++ +A
Sbjct: 433 SHIIENGFRM---EMVVETALINMYGKCGKMAEA 463
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 171/346 (49%), Gaps = 9/346 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L L + +++H + + + D+ + +++ Y +C +A K+F +M KD++TWT
Sbjct: 319 TSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWT 378
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ Y+QN + A+ LF +M G +P TL +VL A K GRQ+H+ ++
Sbjct: 379 VMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK-GRQIHSHIIE 437
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G+ + V ++L++MY + +M +A +F + ++ + WN+++ +A+ ++ L+
Sbjct: 438 NGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQL 497
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M +G + S+ SV +AL+ +GS+ G ++ A + + +VD+
Sbjct: 498 FNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLG 557
Query: 242 KSGSIEDAEKVFNRL--LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
++G I++A + +L D + W ++L C H E++L P+
Sbjct: 558 RAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD--PSHSGA 615
Query: 300 LCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
VL+ + AG D LM+ GV+ E + +++L R
Sbjct: 616 YVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGR--SSIEILNRV 659
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L++ R +H+HI+ + F+ ++ ++ ++N Y KCG + EAR +F++M +D++ W
Sbjct: 419 CAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVW 478
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKF 112
+++ Y+Q+ + + LF+QM G K + + SVL A S +G+ D +
Sbjct: 479 NSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGY 530
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F+P + ++ +S +++ G+ VH HV G + V L+ MYA+ GS+ +A+
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+VF L ++DV +W M+ Q G + F +M + P +VT++ +L AC+
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
L +G + + G E + +++ + G + A + + + W A++
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAMI 179
Query: 371 GACRMHKNVELGAYAAERIFELD 393
AC H L + R+ +LD
Sbjct: 180 AACVQHDQFALARWLYRRM-QLD 201
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 335/550 (60%), Gaps = 7/550 (1%)
Query: 23 FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFS 82
F +D + +L+ Y C +AR+ FDE+P + V TA+ SG +N+ + +F
Sbjct: 120 FPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFR 179
Query: 83 QMLRLGLKPNQFTLSSVLKASGAGATDDK-FGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
M+ G ++++ S + D+ +HA K G D V ++++D YA+
Sbjct: 180 SMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAK 239
Query: 142 FDQMD--DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTHFS 197
D A LF ++ ++ VSWN +IA +A+ +AL +S+ML G +
Sbjct: 240 GGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVT 298
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
S+V A A G+++ GK +H V++ G + +VG ++VDMY+K G +E A K F ++
Sbjct: 299 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIK 358
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
++++SW++M+ G HG G+ + F M ++G+ PN +TF+ VL ACSHAGLL EG+
Sbjct: 359 GKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRY 418
Query: 318 YFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++ MK + G+EP HY VDLLGRAG LD A I+EM ++P AA+WGALL ACR++
Sbjct: 419 WYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIY 478
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
KNVEL AER+FELD +SG ++LL+NIYA AG + R R ++K G++K P S
Sbjct: 479 KNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSS 538
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
VE K H+F D +HPQ I+ ++ E+I GYVP++ VL D +ERE+ L+
Sbjct: 539 VELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLR 598
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFR 556
+HSEKLA+AFAL+++ GS IH+ KN+RVC DCH+A K +K+ REII+RD RFHHF+
Sbjct: 599 IHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFK 658
Query: 557 DGFCSCGDYW 566
DG CSCGDYW
Sbjct: 659 DGLCSCGDYW 668
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H ++ + +H ++ ++++ + ++++ Y+KCG ++ A K F ++ K++++W
Sbjct: 306 CAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSW 365
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
+A+I+GY + + A+ +F+ M + GLKPN T +VL A S AG + GR +
Sbjct: 366 SAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSE--GRYWYNTM 423
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIA 168
++G + V ++D+ R +D+A+ L ++ K + + W AL++
Sbjct: 424 KTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLS 473
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 334/566 (59%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++H+ + + F D+ ++ ++ Y+KCG L +A K+FD+M VK++V+W
Sbjct: 114 CARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSW 173
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G + + A+ LF +L GL+P+ F + VL+A A D + GR +
Sbjct: 174 TGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRAC-ARLGDLESGRWIDRCMR 232
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G NV+V +SL+DMY + M++A F+F + K+ V W+A+I G+A +A+
Sbjct: 233 ECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIE 292
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM + P ++ ++ AS G+LE G W + +G +L+D YA
Sbjct: 293 LFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYA 352
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+E+A V+ + ++D V +N++++G A +G A F +M + GI PN+ TF+
Sbjct: 353 KCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVG 412
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C+HAGL+D+G+ YF M V P HY VDLL RAG LD A I+ MP++
Sbjct: 413 LLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
VWG+LLG CR+H+ +L + +++ EL+P +SG ++LL+NIY+++ R ++A + R
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIR 532
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ E G++K P SWVE VH F+ D +HP I++K + + +K+ GY P +
Sbjct: 533 STVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTE 592
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++E+E L HSEKLA+AFALIST I + KN+RVCGDCH A K SKV
Sbjct: 593 FVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVT 652
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD NRFH F DG CSC DYW
Sbjct: 653 GREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 9/261 (3%)
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+ N +N +I G K A+ ++ M + P F++S V A A G
Sbjct: 66 NSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVM 125
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H+ V K+G FV +V Y+K G + DA KVF+ ++ ++VVSW M+ GC + G
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ V F +L +G+ P+ + VL AC+ G L+ G+ M++ G+ +
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
VD+ + G ++ A +F+ + +E W A++ + + L A E FE+ +
Sbjct: 246 LVDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAMIQG---YASNGLPREAIELFFEMRKVN 301
Query: 397 SGPHILLANIYASAGRLNDAA 417
P + YA G L+ A
Sbjct: 302 VRP-----DCYAMVGALSSCA 317
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/605 (38%), Positives = 346/605 (57%), Gaps = 46/605 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKL--FDEMPVKDMV 59
CT ++K+ VHAHI+ + + ++ K + L F ++ +
Sbjct: 52 CTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPF 108
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA- 118
WTA+I GY+ + +++M R G+ P FT S++ KA GA D G+QVHA
Sbjct: 109 LWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMD-LGKQVHAQ 167
Query: 119 FCLKYGYDWNVYVGSSLLDMY-------------------------------ARFDQMDD 147
L G+ ++YVG+S++D+Y A++ M+
Sbjct: 168 TILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMES 227
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF L SK+ V+W A++ G+A+ ++AL F +M G E + + V +A A
Sbjct: 228 ASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ 287
Query: 208 TGSLEQGKWVHAHVIKSG----GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
G+++ W+ +SG G +V VG+ L+DMY+K GS ++A KVF + +R+V S
Sbjct: 288 LGAVKHANWIRDIAERSGFGPSGNVV--VGSALIDMYSKCGSPDEAYKVFEVMKERNVFS 345
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++SM+ G A HG + ++ F ML+ I PN+VTF+ +L+ACSHAGL+++G+ FA M+
Sbjct: 346 YSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKME 405
Query: 324 KH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K GV P HY VDLLGRAG L+ AL ++ MP+EP VWGALLGACR+H N ++
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIA 465
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AA +F+L+P+ G +ILL+NIYASAGR + ++ RK+++E G KK P CSW E KN
Sbjct: 466 QIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNG 525
Query: 443 -VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+H F A D HP+ + I + +++ E+++ GY P+ E+E L HSEK
Sbjct: 526 EIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEK 585
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LALA+ L+ T G TI I KNIR+C DCH+ AS++ REIIVRD RFHHF +G CS
Sbjct: 586 LALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCS 645
Query: 562 CGDYW 566
CG++W
Sbjct: 646 CGNFW 650
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 325/577 (56%), Gaps = 33/577 (5%)
Query: 22 AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILF 81
F +D +Q ++ YA C + +AR LFD+M D V W +I GY QN ++A+ LF
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 82 SQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
M +KP+ L +VL A G A + +GR +H F GY + ++ ++L++MYA
Sbjct: 211 EDMRSSDMKPDSVILCTVLSACGH-AGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYAN 269
Query: 142 FDQMD-------------------------------DAWFLFTALESKNEVSWNALIAGH 170
MD DA F+F + ++ V W+A+I+G+
Sbjct: 270 CGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGY 329
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
A + ++AL+ F EML++ P + SV +A + G+L Q W+H +V +SG
Sbjct: 330 AESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRAL 389
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V N L+DMYAK G++ A +VF + +++V+SW+SM+ A HG + ++ F +M
Sbjct: 390 SVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEV 449
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
I PN VTF+ VL AC HAGL++EG+ F+ ++ +HG+ P HY VDL RA L +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRK 509
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A++ I MP P +WG+L+ AC++H ELG +AA+R+ EL+P G ++L+NIYA
Sbjct: 510 AIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAK 569
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
R ND RK M G+ KE A S +E N VHMF+ D H Q I++K E+ K
Sbjct: 570 EKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSK 629
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
+K +GY P +S +L ++++++ + HSEKLA+ + LIS S I I KN+R+C DC
Sbjct: 630 LKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDC 689
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
HS K SKV + EI+VRD RFHH G CSC DYW
Sbjct: 690 HSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 189/415 (45%), Gaps = 38/415 (9%)
Query: 49 LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGA 107
+F ++P L+ S++ PE I L+ + + ++F+ S+LKA +
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
+ G ++H K G+ + ++ + L+ MYA ++ DA LF + + V+WN +I
Sbjct: 136 AFNH-GLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMII 194
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
G+ + + ALR F +M +P +V +A G+L G+ +H V +G
Sbjct: 195 DGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254
Query: 228 LVAFVGNTLVDM-------------------------------YAKSGSIEDAEKVFNRL 256
+ + + L++M YAK G ++DA +F+++
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
++RD+V W++M++G A+ + ++ F++ML+ P+Q+T L V++ACSH G L +
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + G + +D+ + G L +A + MP W +++ A MH
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMH 433
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYAS--AGRLNDAARA-RKMMKESGV 428
N + R+ E++ +G + +YA AG + + + M+ E G+
Sbjct: 434 GNADSAIKLFRRMKEVNIEPNGV-TFIGVLYACGHAGLVEEGEKLFSSMINEHGI 487
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 46/313 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C H L R +H + + + D +Q ++N YA CG +D ARK
Sbjct: 232 CGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVS 291
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+FD+M +D+V W+A+ISGY+++DQP+ A+ LF +ML+
Sbjct: 292 TAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV 351
Query: 91 PNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+Q T+ SV+ A S GA +H + + G+ + V ++L+DMYA+ + A
Sbjct: 352 PDQITMLSVISACSHVGALAQ--ANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAR 409
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + KN +SW+++I A + A++ F M EP ++ V A G
Sbjct: 410 EVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAG 469
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNT------LVDMYAKSGSIEDAEKVFNRL-LKRDVV 262
+E+G+ + + +I G + T +VD+Y ++ + A ++ + +V+
Sbjct: 470 LVEEGEKLFSSMINEHG-----ISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVI 524
Query: 263 SWNSMLTGCAQHG 275
W S+++ C HG
Sbjct: 525 IWGSLMSACQVHG 537
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+H+ L +A +H ++ S F +++ N +++ YAKCG L +AR++F+ MP K++++W
Sbjct: 364 CSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISW 423
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++I+ ++ + ++AI LF +M + ++PN T VL A G ++ + +
Sbjct: 424 SSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMIN 483
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKAL 180
++G ++D+Y R + + A L + + N + W +L++ A + GE L
Sbjct: 484 EHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMS--ACQVHGEAEL 541
Query: 181 RTFSEMLREGFEPTH 195
F+ EP H
Sbjct: 542 GEFAAKRLLELEPDH 556
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/529 (39%), Positives = 326/529 (61%), Gaps = 39/529 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L VHA + S + D+ M + +++ Y+KCG + A ++F M +++VTW
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+ Y QN A+ +F +M+ GL+P++ TL+SV+ A A K G Q+HA +
Sbjct: 217 NSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSAC-ASLCALKEGLQIHARVV 275
Query: 122 KYG-YDWNVYVGSSLLDMYAR----------FDQMD---------------------DAW 149
K + ++ +G++L+DMYA+ FD+M A
Sbjct: 276 KTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAAR 335
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
F+F+ + +N VSWNALIAG+ + E E+ALR F + RE PTH+++ ++ +A A+
Sbjct: 336 FMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLA 395
Query: 210 SLEQGKWVHAHVIK------SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
L G+ H HV+K SG + FVGN+L+DMY K GSIED +VF ++ +RD VS
Sbjct: 396 DLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVS 455
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+++ G AQ+G G ++ F KML G P+ VT + VL ACSHAGL++EG+ YF M+
Sbjct: 456 WNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME 515
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+HG+ P + HY VDLLGRAG L+ A I MP+ P A VWG+LL AC++H N+E+G
Sbjct: 516 EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGK 575
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AAE++ E+DP +SGP++LL+N+YA GR D R RK+M++ GV K+P CSW+E ++ V
Sbjct: 576 HAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRV 635
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
H+F+ D +HP R I+ + ++E++K++GY+PD++ +Y +Q + E
Sbjct: 636 HVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYDEQSKSE 684
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 213/440 (48%), Gaps = 75/440 (17%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R+VHA IL + F +I +QN +++ Y KC CLD+ARKLFD MP ++ TW
Sbjct: 25 CLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTW 84
Query: 62 TALI-------------------------------SGYSQNDQPENAIILFSQMLRLGLK 90
+LI SG++Q+D+ E ++ F +M R
Sbjct: 85 NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+++ S L A AG D G QVHA K Y +VY+GS+L+DMY++ + A
Sbjct: 145 LNEYSFGSALSAC-AGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F+ + +N V+WN+LI + + +AL F M+ G EP + +SV +A AS +
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263
Query: 211 LEQGKWVHAHVIKSG---GQLVAFVGNTLVDMYAKSGSIEDAEKVFNR------------ 255
L++G +HA V+K+ LV +GN LVDMYAK + +A +VF+R
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLV--LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSM 321
Query: 256 -------------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+ +R+VVSWN+++ G Q+G + +R F + R I P
Sbjct: 322 VSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTH 381
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVE----PEEAHYV--TFVDLLGRAGLLDRA 350
TF +L+AC++ L G+ + K G E E +V + +D+ + G ++
Sbjct: 382 YTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDG 441
Query: 351 LKFIREMPIEPTAAVWGALL 370
+ +M E W A++
Sbjct: 442 SRVFEKMK-ERDCVSWNAII 460
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 150/316 (47%), Gaps = 37/316 (11%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P L S L++ A T R VHA L + +++ + L+D+Y + D +DDA
Sbjct: 17 PFAKLLDSCLRSRSARGT-----RLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 151 LFTALESKN-------------------------------EVSWNALIAGHARKSEGEKA 179
LF + +N + SWN++++G A+ E++
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F +M RE F +S+ S +A A L G VHA V KS ++G+ L+DM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K GS+ AE+VF+ +++R++V+WNS++T Q+G + F +M+ +G+ P++VT
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 300 LCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
V++AC+ L EG Q + ++K + + VD+ + ++ A + M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 359 IEPTAAVWGALLGACR 374
I + + G R
Sbjct: 312 IRNVVSETSMVSGYAR 327
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
++R+ + P ++ + + + S + VHA ++ + + F+ N L+D+Y K
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 246 IEDAEKVFNRLLKR-------------------------------DVVSWNSMLTGCAQH 274
++DA K+F+R+ +R D SWNSM++G AQH
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 275 GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG--YFALMKKHGVEPEEA 332
+ ++ +F KM R N+ +F L+AC AGL+D G AL+ K +
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGTQVHALVSKSRYSTDVY 183
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+D+ + G + A + M IE W +L+
Sbjct: 184 MGSALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLI 220
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 332/576 (57%), Gaps = 53/576 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQ-NDQ--PENAIILFSQMLRLG-LKPNQFTLSS 98
+D AR +F +MP + W ++ ++ ND+ A++LFS ML G +KPN+FT S
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127
Query: 99 VLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA---- 154
VLKA A A+ + G+Q+H +K+G+ + +V S+L+ MY M+DA+ LF
Sbjct: 128 VLKAC-ARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 155 -------------------------------------------LESKNEVSWNALIAGHA 171
+ ++ VSWN +I+G+A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ +A+ F EM +P + + SV A+A G+LE GKW+H + K+ ++
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV 306
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
+G+ LVDMY+K GSI+ A +VF L KR+ ++W++++ A HG + + F M + G
Sbjct: 307 LGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAG 366
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ PN V ++ +L+ACSHAGL++EG+ +F+ ++K G++P HY VDLLGRAG L+ A
Sbjct: 367 VTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEA 426
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
+ IR MPIEP +W ALLGAC+MHKN+++G AE + EL PHDSG ++ L+N+YAS
Sbjct: 427 EELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
G AR R MK ++K+P CSW+E +H F+ DD+H + I E+S K+
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+ GY P++ V D+QER LQ HSEK+A+AF LIST P + I KN+R+C DCH
Sbjct: 547 RSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCH 606
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ K S + +R+IIVRD RFH F G CSC DYW
Sbjct: 607 ASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 147/274 (53%), Gaps = 9/274 (3%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ + N +++ + G + A+ LFDEMP + +V+W +ISGY+QN AI LF +M
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 86 RLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
+ PN TL SVL A + GA + G+ +H + K + + +GS+L+DMY++
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALE--LGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGS 320
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D A +F L +N ++W+A+I A E A+ F M + G P +Y + +A
Sbjct: 321 IDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380
Query: 205 LASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVF-NRLLKRDV 261
+ G +E+G+ +H++K G + G +VD+ ++G +E+AE++ N ++ D
Sbjct: 381 CSHAGLVEEGRSFFSHMVKVVGLQPRIEHYG-CMVDLLGRAGHLEEAEELIRNMPIEPDD 439
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
V W ++L C H K R E ++ +AP+
Sbjct: 440 VIWKALLGACKMHKNLKMGERVAETLME--LAPH 471
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 138/319 (43%), Gaps = 53/319 (16%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHAR 172
+Q+HA +K G + + ++ A + +D A +F + N WN ++ A
Sbjct: 36 KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAE 95
Query: 173 KSE---GEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
++ +AL FS ML +G +P F++ SV A A L +GK +H ++K G
Sbjct: 96 TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHE 155
Query: 229 VAFVGNTLVDMY-----------------------------------------------A 241
FV + LV MY
Sbjct: 156 DEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQV 215
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G I+ A+ +F+ + R VVSWN M++G AQ+G + F++M + I PN VT +
Sbjct: 216 RLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVS 275
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL A + G L+ G+ K+ VE ++ VD+ + G +D+AL+ +P +
Sbjct: 276 VLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLP-KR 334
Query: 362 TAAVWGALLGACRMHKNVE 380
A W A++GA MH E
Sbjct: 335 NAITWSAIIGAFAMHGRAE 353
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + +H + + + D + + +++ Y+KCG +D+A ++F+ +P ++ +TW+A+I
Sbjct: 286 LELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGA 345
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLK-YGY 125
++ + + E+AII F M + G+ PN +L A S AG ++ GR + +K G
Sbjct: 346 FAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEE--GRSFFSHMVKVVGL 403
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGEKALR 181
+ ++D+ R +++A L + ++V W AL+ H GE+
Sbjct: 404 QPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAE 463
Query: 182 TFSEM 186
T E+
Sbjct: 464 TLMEL 468
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 331/563 (58%), Gaps = 16/563 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L +AR H+ D+ NT+L + G D AR+LF MPV+D+ +W ++S
Sbjct: 64 RLADAR----HLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVS 119
Query: 67 GYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G S++ E A ++F M +R + N + S SG +T +++ R
Sbjct: 120 GLSKSGAVEEAKVVFLAMPVRNSVSWN--AMVSGFACSGDMSTAEEWFRNAPE------- 170
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + ++++ Y + A F A+ +N VSWNA++AG+ + S + ALR F
Sbjct: 171 KEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 186 MLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M+RE +P + SSV ++ +L GK +H +K VG +LV MY K G
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCG 290
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ A +F + RDVV+WN+M++G AQHG GK + FE+M G+ PN +TF+ VLT
Sbjct: 291 DLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLT 350
Query: 305 ACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC H GL D G Q + + + +G+EP HY VDLL RAG L+RA+ FIR MP EP
Sbjct: 351 ACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHP 410
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+ +G LL ACR++KN+E AA ++ E DP +G ++ LANIYA A + +D +R R+ M
Sbjct: 411 SAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWM 470
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
K++ V K P SW+E K +H F +ND HPQ +IH+K +++E++K++GYVPD VL
Sbjct: 471 KDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVL 530
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
D+ + L HSEKLA+AF LIST G T+ I KN+RVCGDCH+A K S + +RE
Sbjct: 531 HDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCGDCHNAAKVISMIEDRE 590
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
II+RDT RFHHFR G CSC DYW
Sbjct: 591 IILRDTTRFHHFRGGHCSCDDYW 613
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L + +H + ++ + ++++ Y KCG L A LF EM +D+V W
Sbjct: 251 CSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAW 310
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ + AI LF +M G++PN T VL A D FG Q C
Sbjct: 311 NAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCD-FGIQ----CF 365
Query: 122 K-----YGYDWNVYVGSSLLDMYARFDQMDDA 148
+ YG + V S ++D+ R +++ A
Sbjct: 366 EGMQELYGIEPRVDHYSCMVDLLCRAGKLERA 397
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 30/232 (12%)
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + K ++N L+AG+AR R + + P SY+++ ++G
Sbjct: 40 FVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIP---TPDVVSYNTLLLCHFASGDA 96
Query: 212 EQGKWVHAHV-IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
+ + + A + ++ NT+V +KSG++E+A+ VF + R+ VSWN+M++G
Sbjct: 97 DGARRLFASMPVRDVASW-----NTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSG 151
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ-----GYFALMKKH 325
A G WF RN AP + VL +G +D G YF M
Sbjct: 152 FACSGDMSTAEEWF----RN--APEKED--AVLWTAMVSGYMDIGNVVKAIKYFEAMPVR 203
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKF----IREMPIEPTAAVWGALLGAC 373
+ A +V + D AL+ +RE ++P A+ ++L C
Sbjct: 204 NLVSWNAVVAGYV----KNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 334/564 (59%), Gaps = 10/564 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R HA I+ + DI ++N Y+KC + RK DEM VK ++ I +Q
Sbjct: 69 GRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQ 128
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N + A+ L +M R N+FT+SSVL + A Q+HAF +K D N +
Sbjct: 129 NAEDRKALKLLIRMQREVTPFNEFTISSVL-CNCAFKCAILECMQLHAFSIKAAIDSNCF 187
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++LL +YA+ + DA +F ++ KN V+W++++AG+ + ++AL F G
Sbjct: 188 VXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMG 247
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F+ F+ SS +A A +L +GK VHA KSG +V ++L+DMYAK G I +A
Sbjct: 248 FDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAY 307
Query: 251 KVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
VF ++ R +V WN+M++G A+H L + + FEKM + G P+ VT++ VL ACSH
Sbjct: 308 LVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHM 367
Query: 310 GLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL +EGQ YF LM ++H + P HY +D+LGRAGL+ +A I M T+++WG+
Sbjct: 368 GLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGS 427
Query: 369 LLG-------ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ G +CR++ N+E AA+ +FE++P+++G HILLANIYA+ + ++ ARARK
Sbjct: 428 VRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARK 487
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+++E+ V+KE SW+E KN +H F + HPQ + K + ++K++ Y D+++
Sbjct: 488 LLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDTNN 547
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
L ++ + L HSEKLA+ F L+ P I I KN+R+CGDCH+ K SK
Sbjct: 548 DLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKFAS 607
Query: 542 REIIVRDTNRFHHFRDGFCSCGDY 565
REIIVRDTNRFHHF+DG CSCG++
Sbjct: 608 REIIVRDTNRFHHFKDGLCSCGEF 631
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 140/249 (56%), Gaps = 3/249 (1%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E +HA + +A ++ + +L+ YAKC + +A ++F+ MP K+ VTW+++++GY
Sbjct: 169 ECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYV 228
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
QN + A++LF +G + F +SS + A AT + G+QVHA K G+ N+
Sbjct: 229 QNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVE-GKQVHAMSHKSGFGSNI 287
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTA-LESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
YV SSL+DMYA+ + +A+ +F +E ++ V WNA+I+G AR + ++A+ F +M +
Sbjct: 288 YVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQ 347
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
GF P +Y SV A + G E+G K+ V + + ++D+ ++G ++
Sbjct: 348 RGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQ 407
Query: 248 DAEKVFNRL 256
A + R+
Sbjct: 408 KAYDLIGRM 416
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A TGS G+ HA +I+ G ++ L++MY+K + K + +L + ++ N
Sbjct: 61 AKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXN 120
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+ + Q+ + ++ +M R N+ T VL C+ + E A K
Sbjct: 121 TRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKA 180
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
++ + + + + A + MP E A W +++
Sbjct: 181 AIDSNCFVXTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAG 226
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 336/562 (59%), Gaps = 6/562 (1%)
Query: 7 KLKEARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
KLKE +H + L F ++D + N + YAKCG L A +F M K + +W ALI
Sbjct: 418 KLKE---IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALI 474
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G+ QN P A+ L+ M GL+P+ FT++S+L A A G+++H L+ G+
Sbjct: 475 GGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSAC-ARLKSLSCGKEIHGSMLRNGF 533
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + ++ SL+ +Y + ++ A F +E KN V WN +I G ++ AL F +
Sbjct: 534 ELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
ML P S A + +L GK +H +KS +FV +L+DMYAK G
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGC 653
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+E ++ +F+R+ + V+WN ++TG HG G+ + F+ M G P+ VTF+ +LTA
Sbjct: 654 MEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTA 713
Query: 306 CSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
C+HAGL+ EG Y M+ G++P+ HY VD+LGRAG L+ AL+ + E+P +P +
Sbjct: 714 CNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSR 773
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
+W +LL +CR ++++++G A ++ EL P + ++L++N YA G+ ++ + R+ MK
Sbjct: 774 IWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMK 833
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
E G++K+ CSW+E V F+ D++ Q I + W E+ +KI +IGY PD+S VL
Sbjct: 834 EIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLH 893
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
++ E+ L+ HSEKLA++F L++T G+T+ + KN+R+C DCH+A K SK+ +REI
Sbjct: 894 ELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREI 953
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHF++GFCSCGDYW
Sbjct: 954 IVRDNKRFHHFKNGFCSCGDYW 975
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 19/382 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C K ++ R +H I S F+ND+ + ++ Y+ C ++ +F+ K++
Sbjct: 103 CGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFL 162
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W AL+SGY +N +A+ +F +M+ L P+ FTL V+KA G D + G VH F
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC-VGVYDVRLGEAVHGF 221
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK +V+VG++L+ MY +F ++ A +F + +N VSWN+++ E++
Sbjct: 222 ALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEES 281
Query: 180 LRTFSEMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNT 235
F +L EG P + +V A G + G H +K G G+L V ++
Sbjct: 282 YGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELK--VNSS 339
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGIAP 294
L+DMY+K G + +A +F+ +++V+SWNSM+ G ++ + KM + + +
Sbjct: 340 LLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKV 398
Query: 295 NQVTFLCVLTACSHAGL---LDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRA 350
N+VT L VL C L E GY AL +HG ++ +E FV + G L A
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGY-AL--RHGFIQSDELVANAFVAGYAKCGSLHYA 455
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
M + ++ W AL+G
Sbjct: 456 EGVFCGMESKMVSS-WNALIGG 476
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 147/282 (52%), Gaps = 17/282 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L + +H +L + F+ D + ++++ Y +CG + A+ FD M K++V W
Sbjct: 512 CARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCW 571
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G+SQN+ P +A+ +F QML + P++ ++ L A + + + G+++H F +
Sbjct: 572 NTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGAC-SQVSALRLGKELHCFAV 630
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + +V SL+DMYA+ M+ + +F + K EV+WN LI G+ G KA+
Sbjct: 631 KSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIE 690
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-------- 233
F M GF P ++ ++ TA G + +G ++ GQ+ + G
Sbjct: 691 LFKSMQNAGFRPDSVTFIALLTACNHAGLVAEG-------LEYLGQMQSLFGIKPKLEHY 743
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLL-KRDVVSWNSMLTGCAQH 274
+VDM ++G + +A ++ N L K D W+S+L+ C +
Sbjct: 744 ACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNY 785
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 9/321 (2%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-VYVGSSLLDMYARFDQMDDA 148
KP Q + +L+ G + + GR++H F + N V + + L+ MY+ D D+
Sbjct: 91 KPKQL-IGLLLQLCGE-YKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDS 148
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALAS 207
+F A KN WNAL++G+ R S A+ F EM+ F P +F+ V A
Sbjct: 149 CLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVG 208
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
+ G+ VH +K+ FVGN L+ MY K G +E A KVF+++ +R++VSWNS+
Sbjct: 209 VYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSV 268
Query: 268 LTGCAQHGLGKATVRWFEKMLR--NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+ C ++G+ + + F+ +L G+ P+ T + V+ C+ G + G + L K
Sbjct: 269 MYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL 328
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G+ E + +D+ + G L A E W +++G ++ GA+
Sbjct: 329 GLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGGYSKDRDFR-GAFE 385
Query: 386 AERIFELDPHDSGPHILLANI 406
R +++ + L N+
Sbjct: 386 LLRKMQMEDKVKVNEVTLLNV 406
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/636 (35%), Positives = 349/636 (54%), Gaps = 72/636 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT- 60
C L K + +H S D +Q ++ + Y +CG + +ARK+FD M KD+VT
Sbjct: 126 CAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTC 185
Query: 61 ----------------------------------WTALISGYSQNDQPENAIILFSQMLR 86
W ++SG++++ + A+I+F +M
Sbjct: 186 SALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHH 245
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----- 141
LG P+Q T+SSVL + G + + GRQ+H + +K G + V S++LDMY +
Sbjct: 246 LGFCPDQVTVSSVLPSVG-DSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVY 304
Query: 142 -----FDQ---------------------MDDAWFLFTALESK----NEVSWNALIAGHA 171
FD+ +D A +F + + N VSW ++IAG A
Sbjct: 305 GIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCA 364
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
+ + +AL F EM G +P + S+ A + +L G+ H ++
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVH 424
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
VG+ L+DMYAK G I+ ++ VFN + +++V WNS++ G + HG K + FE ++R
Sbjct: 425 VGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTR 484
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ P+ ++F +L+AC GL DEG YF +M +++G++P HY V+LLGRAG L A
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 351 LKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
I+E+P EP + VWGALL +CR+ NV+L AA+++F L+P + G ++L++NIYA+
Sbjct: 545 YDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAK 604
Query: 411 GRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI 470
G + R M+ G+KK P CSW++ KN V+ +A D +HPQ I +K EISE++
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEM 664
Query: 471 KQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
++ G+ P+ L ++QE+E L HSEKLA+ F L++TP G+ + + KN+R+CGDCH
Sbjct: 665 RKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ KF S REI +RDTNRFHHF+DG CSCGD+W
Sbjct: 725 AVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 182/432 (42%), Gaps = 72/432 (16%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP 74
HA IL S +ND + ++ +Y+ C ++A + +P + ++++LI ++
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 75 ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
+I +FS+M GL P+ L ++ K A + K G+Q+H G D + +V S
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVC-AELSAFKAGKQIHCVACVSGLDMDAFVQGS 156
Query: 135 LLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
L MY R +M DA +F + K+ V+ +AL+ G+ARK E+ +R SEM + G EP
Sbjct: 157 LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPN 216
Query: 195 HFSY-----------------------------------SSVFTALASTGSLEQGKWVHA 219
S+ SSV ++ + +L G+ +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHG 276
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL----------------------- 256
+VIK G V + ++DMY KSG + K+F+
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336
Query: 257 ------------LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++ +VVSW S++ GCAQ+G + F +M G+ PN+VT +L
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
AC + L G+ + + + +D+ + G + + MP +
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK-NLV 455
Query: 365 VWGALLGACRMH 376
W +L+ MH
Sbjct: 456 CWNSLMNGYSMH 467
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 3/231 (1%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q HA LK G + Y+ + L+ Y+ ++ +DA + ++ S+++LI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+++ FS M G P ++F A + + GK +H SG + AFV
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+L MY + G + DA KVF+R+ ++DVV+ +++L G A+ G + VR +M ++GI P
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
N V++ +L+ + +G E F M G P++ VT +L G
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQ---VTVSSVLPSVG 263
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 100/286 (34%), Gaps = 53/286 (18%)
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
HA ++KSG Q ++ L+ Y+ DA+ + + V S++S++ + L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
++ F +M +G+ P+ + C+ G+ + G++ + +
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
+ R G + A K M + L G
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCG-------------------------- 191
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEP-ACSWVETKNAVHMFVANDDAHPQR 456
YA G L + R M++SG+ EP SW + + R
Sbjct: 192 ---------YARKGCLEEVVRILSEMEKSGI--EPNIVSWNGILSGFN-----------R 229
Query: 457 AMIHKKWREISEKIKQIGYVPD----SSHVLSYADQQEREAKLQVH 498
+ HK+ + +K+ +G+ PD SS + S D + Q+H
Sbjct: 230 SGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/563 (38%), Positives = 334/563 (59%), Gaps = 9/563 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A VH ++ + F +D+ + + ++ YAK G L EA LF + ++V + A+I+G +
Sbjct: 236 AAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCR 295
Query: 71 N------DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
+ D A+ L+S++ G++P +FT SSV++A A D +FG+Q+H LK+
Sbjct: 296 DEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNL-AGDIEFGKQIHGQVLKHC 354
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + ++GS+L+D+Y M+D + FT++ ++ V+W A+I+G + E+AL F
Sbjct: 355 FQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFH 414
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
E+L G +P F+ SSV A AS G+ + KSG +GN+ + MYA+SG
Sbjct: 415 ELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSG 474
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+ A + F + D+VSW+++++ AQHG + +R+F +M+ + PN++TFL VLT
Sbjct: 475 DVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLT 534
Query: 305 ACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH GL+DEG Y+ MK ++ + P H VDLLGRAG L A FIR+
Sbjct: 535 ACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP 594
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W +LL +CR+H+++E G A+RI EL P S ++ L NIY AG L+ A++ R +M
Sbjct: 595 VIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVM 654
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
KE GVKKEP SW+E ++ VH FVA D +HP+ I+ K E+ KI ++ D+S
Sbjct: 655 KERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKL-TATDASSTK 713
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
S + ++ + HSEKLA+A LI P + I + KN+RVC DCH K SK +RE
Sbjct: 714 SDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKRE 773
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I++RD RFHHFRDG CSC DYW
Sbjct: 774 IVLRDAIRFHHFRDGSCSCADYW 796
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 204/383 (53%), Gaps = 10/383 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +L+E + VHA + + + N++++ YA+CG + +AR++FD +D V+W
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW 183
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDD--KFGRQVHAF 119
AL+SGY + ++ + +F+ M R G+ N F L SV+K AG+ D VH
Sbjct: 184 NALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCC-AGSDDPVMDIAAAVHGC 242
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG--- 176
+K G+D +V++ S+++ MYA+ + +A LF ++ N V +NA+IAG R
Sbjct: 243 VVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGT 302
Query: 177 ---EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL +SE+ G EPT F++SSV A G +E GK +H V+K Q F+G
Sbjct: 303 DVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG 362
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ L+D+Y SG +ED + F + K+DVV+W +M++GC Q+ L + + F ++L G+
Sbjct: 363 SALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLK 422
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ T V+ AC+ + G+ K G A + + + R+G + A++
Sbjct: 423 PDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRR 482
Query: 354 IREMPIEPTAAVWGALLGACRMH 376
+EM + W A++ + H
Sbjct: 483 FQEMESHDIVS-WSAVISSHAQH 504
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 195/375 (52%), Gaps = 15/375 (4%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
+ A VHAHI+ + + ++NT+L AY + G AR+L DEMP + V++ LI Y
Sbjct: 31 RHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAY 88
Query: 69 SQNDQPENAIILFSQMLR-LGLKPNQFTL-SSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
S+ QPE ++ F++ R G++ ++FT +++ S AG + G+ VHA + G
Sbjct: 89 SRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLRE--GKAVHALSVLEGIA 146
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
V+V +SL+ MYAR M A +F A + +++VSWNAL++G+ R + LR F+ M
Sbjct: 147 GGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMM 206
Query: 187 LREGFEPTHFSYSSVFTALASTGS--LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
R G F+ SV A + ++ VH V+K+G F+ + +V MYAK G
Sbjct: 207 RRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKG 266
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCA--QHGLGKATVR----WFEKMLRNGIAPNQVT 298
++ +A +F +L +VV +N+M+ G + +G +R + ++ G+ P + T
Sbjct: 267 ALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFT 326
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F V+ AC+ AG ++ G+ + KH + ++ +DL +G ++ + +P
Sbjct: 327 FSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVP 386
Query: 359 IEPTAAVWGALLGAC 373
+ W A++ C
Sbjct: 387 -KQDVVTWTAMISGC 400
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 172/341 (50%), Gaps = 24/341 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ + +H +L F+ D + + +++ Y GC+++ + F +P +D+VTW
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTW 393
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISG QN+ E A+ LF ++L GLKP+ FT+SSV+ A + A + G Q+ F
Sbjct: 394 TAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAV-ARTGEQIQCFAT 452
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +G+S + MYAR + A F +ES + VSW+A+I+ HA+ ALR
Sbjct: 453 KSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALR 512
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDM 239
F+EM+ P ++ V TA + G +++G + +K L + + +VD+
Sbjct: 513 FFNEMVDAKVVPNEITFLGVLTACSHGGLVDEG-LKYYETMKEEYALSPTIKHCTCVVDL 571
Query: 240 YAKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
++G + DAE + + + + V W S+L C H M R + +++
Sbjct: 572 LGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIH----------RDMERGQLVADRIM 621
Query: 299 FLCVLTACSHAGL----LDEGQGYFA-----LMKKHGVEPE 330
L ++ S+ L LD G+ A +MK+ GV+ E
Sbjct: 622 ELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKE 662
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
VHA ++ ++++ ++LL Y R A L + N VS+N LI ++R +
Sbjct: 36 VHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93
Query: 176 GEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
E +L TF+ R G F+Y++ A + G L +GK VHA + G FV N
Sbjct: 94 PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
+LV MYA+ G + A +VF+ +RD VSWN++++G + G +R F M R+GI
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213
Query: 295 NQVTFLCVLTAC--SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
N V+ C S ++D + K G + + V + + G L A+
Sbjct: 214 NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVA 273
Query: 353 FIREMPIEPTAAVWGALL-GACR 374
+ + ++P V+ A++ G CR
Sbjct: 274 LFKSV-LDPNVVVFNAMIAGLCR 295
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 332/553 (60%), Gaps = 1/553 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++ RI+H ++ S + + N +++ Y K G + E+R++ +MP +D+V W ALI G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y++++ P+ A+ F M G+ N T+ SVL A + G+ +HA+ + G++
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ +V +SL+ MYA+ + + LF L+++N ++WNA++A +A GE+ L+ S+M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G FS+S +A A LE+G+ +H +K G + +F+ N DMY+K G I
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+ K+ + R + SWN +++ +HG + F +ML GI P VTF+ +LTACS
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660
Query: 308 HAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+D+G Y+ ++ + G+EP H + +DLLGR+G L A FI +MP++P VW
Sbjct: 661 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 720
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
+LL +C++H N++ G AAE + +L+P D ++L +N++A+ GR D RK M
Sbjct: 721 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 780
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
+KK+ ACSWV+ K+ V F D HPQ I+ K +I + IK+ GYV D+S L
Sbjct: 781 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 840
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
D++++E L HSE+LALA+AL+STP GST+ I KN+R+C DCHS +KF S+V+ R I++
Sbjct: 841 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 900
Query: 547 RDTNRFHHFRDGF 559
RD RFHHF G
Sbjct: 901 RDQYRFHHFERGL 913
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 2/365 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+E VH + S +D+ + IL+ Y G + +RK+F+EMP +++V+WT+L+ G
Sbjct: 58 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
YS +PE I ++ M G+ N+ ++S V+ + G D+ GRQ+ +K G +
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL-LKDESLGRQIIGQVVKSGLES 176
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V +SL+ M +D A ++F + ++ +SWN++ A +A+ E++ R FS M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R E + S++ + L + G+ +H V+K G V V NTL+ MYA +G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ +D++SWNS++ G + M+ +G + N VTF L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
++G+ L+ G+ + V + G+ G + + + + +MP A W
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WN 415
Query: 368 ALLGA 372
AL+G
Sbjct: 416 ALIGG 420
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 189/380 (49%), Gaps = 3/380 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK R + ++ S ++ +A++N++++ G +D A +FD+M +D ++W
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ + Y+QN E + +FS M R + N T+S++L G K+GR +H +
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH-VDHQKWGRGIHGLVV 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D V V ++LL MYA + +A +F + +K+ +SWN+L+A AL
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M+ G + +++S A + E+G+ +H V+ SG +GN LV MY
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + ++ +V ++ +RDVV+WN+++ G A+ + F+ M G++ N +T +
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 451
Query: 302 VLTACSHAG-LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC G LL+ G+ A + G E +E + + + + G L + +
Sbjct: 452 VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-N 510
Query: 361 PTAAVWGALLGACRMHKNVE 380
W A+L A H + E
Sbjct: 511 RNIITWNAMLAANAHHGHGE 530
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 156/320 (48%), Gaps = 1/320 (0%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
MPV++ V+W ++SG + + F +M LG+KP+ F ++S++ A G + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G QVH F K G +VYV +++L +Y + + + +F + +N VSW +L+ G++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
K E E+ + + M EG S S V ++ G+ + V+KSG + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N+L+ M G+++ A +F+++ +RD +SWNS+ AQ+G + + R F M R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
N T +L+ H G+G L+ K G + T + + AG A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 353 FIREMPIEPTAAVWGALLGA 372
++MP + + W +L+ +
Sbjct: 301 VFKQMPTKDLIS-WNSLMAS 319
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 48/285 (16%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+E + +H + F++D + N + Y+KCG + E K+ + + +W L
Sbjct: 561 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 620
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
IS ++ E F +ML +G+KP T S+L A G DK +G
Sbjct: 621 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 680
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGEKAL 180
+ + ++D+ R ++ +A + + K N++ W +L+A H G KA
Sbjct: 681 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 740
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
S++ EP S +V+ S +M+
Sbjct: 741 ENLSKL-----EPEDDS---------------------VYVLSS-------------NMF 761
Query: 241 AKSGSIEDAEKV-----FNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
A +G ED E V F + K+ SW + + G+G T
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 806
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/580 (40%), Positives = 328/580 (56%), Gaps = 18/580 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN-----AYAKCGCLDEARKLFDEMP- 54
+CT L+ L + +HA + S + A +L AK L AR++FD +P
Sbjct: 40 QCTTLRALAQ---LHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPG 96
Query: 55 VKDMVTWTALISGYSQ-------NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGA 107
D+V + L+ GY++ E A +F +ML G+ P+ +T S+LKA A
Sbjct: 97 PGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAAR 156
Query: 108 TDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALI 167
++ GRQ H +K G + YV +L++MYA A +F ++ + VS+NA+I
Sbjct: 157 AGEE-GRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMI 215
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
R S +AL F EM +G + T + SV +A A G+LE G+W+H +V K
Sbjct: 216 TAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLD 275
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
+ V L+DMY K GS+EDA VF + RD +W+ M+ A H G+ + FE+M
Sbjct: 276 SLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEM 335
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
+ GI P+ VTFL VL ACSH+GL+ EG YF M++ G+ P HY DLL R+G L
Sbjct: 336 KKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGCVADLLARSGQL 395
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIY 407
DRA +FI E+PI+PTA +W LL AC + +LG ERI ELD G +++ +N+
Sbjct: 396 DRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLC 455
Query: 408 ASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREIS 467
A+ GR + R RK+M E GV K P CS +E N VH F A D HP+ + +
Sbjct: 456 ANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVI 515
Query: 468 EKIKQIGYVPDSSHVLSY-ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVC 526
E++K GYVP++SHV ++E+ L+ HSEKLA++F L++T PG+T+ + KN+RVC
Sbjct: 516 EQLKLAGYVPNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVC 575
Query: 527 GDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
DCHS K S V R II+RD NRFHHF DG CSCGDYW
Sbjct: 576 PDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/565 (39%), Positives = 335/565 (59%), Gaps = 7/565 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R +HA+++ + F DI++ N++ Y G EA KLF M KD+V+W
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSW 366
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +ISGY N PE AI + M + +KP++ T+++VL A A D G ++H +
Sbjct: 367 TTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSAC-ATLGDLDTGVELHKLAI 425
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K V V ++L++MY++ +D A +F + KN +SW ++IAG + +AL
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + +P + ++ A A G+L GK +HAHV+++G L F+ N L+DMY
Sbjct: 486 FFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G + A FN K+DV SWN +LTG ++ G G V F++M++ + P+++TF+
Sbjct: 545 RCGRMNIAWNQFNSQ-KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFIS 603
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L C + ++ +G YF+ M+++GV P HY VDLLGRAG L A KFI++MP+ P
Sbjct: 604 LLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
AVWGALL ACR+H N++LG +A+RIFELD G +ILL N+YA G+ + A+ R+
Sbjct: 664 DPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMKE+G+ + CSWVE K VH F+++D HPQ I+ EK+ ++G S
Sbjct: 724 MMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSES 783
Query: 482 VLSYADQQE--REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S D+ E R+ HSE+ A+AF LI++ PG I + KN+ +C CH KF SK
Sbjct: 784 --SSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKT 841
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGD 564
V REI VRD+ FHHF+DG CSCGD
Sbjct: 842 VRREISVRDSEHFHHFKDGECSCGD 866
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 197/380 (51%), Gaps = 11/380 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +E V++ L S + + N L + + G L +A +F +M +++ +W
Sbjct: 104 CEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
L+ GY++ + AI L+ +ML +G +KP+ +T VL+ G G D GR+VH
Sbjct: 164 NVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCG-GIPDLARGREVHVHV 222
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++YGY+ ++ V ++L+ MY + + A LF + ++ +SWNA+I+G+ G + L
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGL 282
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F M +P + +SV +A G G+ +HA+VI +G + V N+L MY
Sbjct: 283 KLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+GS +AEK+F+R+ +D+VSW +M++G + L + + + M ++ + P+++T
Sbjct: 343 LYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVA 402
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV----TFVDLLGRAGLLDRALKFIRE 356
VL+AC+ G LD G + K ++ YV +++ + +D+AL
Sbjct: 403 AVLSACATLGDLDTG----VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458
Query: 357 MPIEPTAAVWGALLGACRMH 376
+P W +++ R++
Sbjct: 459 IP-RKNVISWTSIIAGLRLN 477
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/571 (39%), Positives = 345/571 (60%), Gaps = 8/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H L D+++ N +L YA+ GC E K+F MP D V+W
Sbjct: 971 CASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSW 1030
Query: 62 TALISGYSQNDQP-ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++I S ++ A+ F +M+R G ++ T ++L A + + + Q+HA
Sbjct: 1031 NSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHE-VSHQIHALV 1089
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
LKY + +G++LL Y + +M++ +F + E+++EVSWN++I+G+ KA
Sbjct: 1090 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 1149
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M+++G F++++V +A AS +LE+G VHA I++ + VG+ LVDM
Sbjct: 1150 MDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDM 1209
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT- 298
Y+K G I+ A + F + R+V SWNSM++G A+HG G+ ++ F +M+ +G P+ V
Sbjct: 1210 YSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAP 1269
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L VL+ACSH G ++EG +F M + + + P H+ VDLLGRAG LD FI M
Sbjct: 1270 LLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM 1329
Query: 358 PIEPTAAVWGALLGAC-RMH-KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
P++P +W +LGAC R + +N ELG AAE + EL+P ++ ++LLAN+YAS + D
Sbjct: 1330 PMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWED 1389
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A+AR MKE+ VKKE CSWV K+ VH+FVA D HP++ I+ K RE++ K++ GY
Sbjct: 1390 VAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGY 1449
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+P + + L + + +E L HSEK+A+AF L + I I KN+RVCGDCHSAF +
Sbjct: 1450 IPQTKYALFDLELENKEELLSYHSEKIAVAFVL-TRQSALPIRIMKNLRVCGDCHSAFGY 1508
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+V R+I++RD+NRFHHF DG CSCGDYW
Sbjct: 1509 ISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 213/407 (52%), Gaps = 24/407 (5%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
+EAR +H + F ++ + NT++N Y + G L A+KLFDEM +++VTW LISGY
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDW 127
+QN +P+ A F M+R G PN + S L+A +G + K G Q+H K Y
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 680
Query: 128 NVYVGSSLLDMYAR-FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V V + L+ MY D +DA +F + +N +SWN++I+ ++R+ + A FS M
Sbjct: 681 DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740
Query: 187 LREG----FEPTHFSYSSVFTALASTGS-----LEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+EG F+P +++ S+ TA S+ LEQ + A V KSG +VG+ LV
Sbjct: 741 QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQ---MLARVEKSGFLQDLYVGSALV 797
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+A+ G +DA+ +F ++ R+VVS N ++ G + G+A + F +M ++ + N
Sbjct: 798 SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 856
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGV-----EPEEAHYVTFVDLLGRAGLLDRALK 352
+++ +L+A S +L+EG+ + H + + + A V++ ++G + A
Sbjct: 857 SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+ E+ +E + W +L+ + +N E AAE + S P
Sbjct: 917 -VFELMVEKDSVSWNSLISG--LDQN-ECSEDAAESFLRMRRTGSMP 959
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 195/386 (50%), Gaps = 8/386 (2%)
Query: 16 AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPE 75
A + S F D+ + + +++ +A+ G D+A+ +F++M V+++V+ L+ G + Q E
Sbjct: 779 ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGE 838
Query: 76 NAIILFSQMLRL-GLKPNQFT-LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-VYVG 132
A +F +M L G+ + + L S + GR+VHA ++ G + N V +G
Sbjct: 839 AAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 898
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+ L++MYA+ + DA +F + K+ VSWN+LI+G + E A +F M R G
Sbjct: 899 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM 958
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P++F+ S ++ AS G + G+ +H +K G V N L+ +YA++G + KV
Sbjct: 959 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKV 1018
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKA-TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
F+ + + D VSWNS++ + + V++F +M+R G ++VTF+ +L+A S L
Sbjct: 1019 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL 1078
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ AL+ K+ + + A + G+ G ++ K M W +++
Sbjct: 1079 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 1138
Query: 372 AC----RMHKNVELGAYAAERIFELD 393
+HK ++L + ++ LD
Sbjct: 1139 GYIHNELLHKAMDLVWFMMQKGQRLD 1164
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 154/322 (47%), Gaps = 10/322 (3%)
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
G+ + R++H +KYG+ N+++ ++L+++Y R + A LF + ++N V+W
Sbjct: 556 GSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWAC 615
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG--SLEQGKWVHAHVIK 223
LI+G+ + + ++A F +M+R GF P H+++ S A +G + G +H + K
Sbjct: 616 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 675
Query: 224 SGGQLVAFVGNTLVDMYAKS-GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
+ V N L+ MY S DA VF+R+ R+ +SWNS+++ ++ G +
Sbjct: 676 TRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYD 735
Query: 283 WFEKMLRNGIA----PNQVTFLCVLT-ACSHAGL-LDEGQGYFALMKKHGVEPEEAHYVT 336
F M + G+ PN+ TF ++T ACS L + A ++K G +
Sbjct: 736 LFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSA 795
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
V R GL D A +M + ++ G ++G + K E A + +L +
Sbjct: 796 LVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK-QKQGEAAAKVFHEMKDLVGIN 854
Query: 397 SGPHILLANIYASAGRLNDAAR 418
S +++L + ++ L + R
Sbjct: 855 SDSYVVLLSAFSEFSVLEEGRR 876
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 194 THFSYSSVFTALAS--TGSL--EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
T FS S F +L + GS E+ + +H IK G F+ NTL+++Y + G + A
Sbjct: 539 TLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSA 598
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+K+F+ + R++V+W +++G Q+G F M+R G PN F L AC +
Sbjct: 599 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 658
Query: 310 G 310
G
Sbjct: 659 G 659
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/627 (37%), Positives = 339/627 (54%), Gaps = 68/627 (10%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE---ARKLFDEMPVKDMVTWTA 63
KL + +HA I+ ++ + + +L C ++ AR +FDE+P D W
Sbjct: 15 KLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNT 74
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKP-NQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+I Y + P+ ++ LF QM P + ++LS V++A G D G+++H LK
Sbjct: 75 MIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGR-LKDPGNGQKLHTQVLK 133
Query: 123 YGYDWNVYVGSSLLDMYA-------------------------------RFDQMDDAWFL 151
G +++V ++L++MYA R +++ A L
Sbjct: 134 IGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDL 193
Query: 152 FTALESKNEVSWNALIAGHA-------------------------------RKSEGEKAL 180
F + ++ VSWN +I GHA + + +AL
Sbjct: 194 FDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEAL 253
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F EM P + SV +A G+L GK +H + ++ ++ +G +LVDMY
Sbjct: 254 RLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMY 313
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AK G I+++ +VFN + RDV +W++M+ G A HG G+ + F KM+ I PN VTF+
Sbjct: 314 AKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFI 373
Query: 301 CVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+ACSH GL+DEG YF M K + V P+ HY VD+LGRAG L A++ I+ MP
Sbjct: 374 GVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPF 433
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
P A VW ALLGACR++KNVE+ A + EL+PH G ++LL+NIY+ A +
Sbjct: 434 APDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNV 493
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+MMK ++K P S +E NAVH FVA D +HP+ I + EI+ ++K GY P +
Sbjct: 494 RRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLT 553
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ VL D++E+E L HSEKLA+AF L+ST PGSTI I KN+RVC DCH A K S+
Sbjct: 554 ASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRT 613
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+R IIVRD NRFHHF +G CSC DYW
Sbjct: 614 YKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 69/336 (20%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C LK + +H +L +D+ ++ ++ YAK G ++ AR
Sbjct: 115 CGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPY 174
Query: 49 ------------------LFDEMPVKDMVTWTALISG----------------------- 67
LFD MP +D+V+W +I G
Sbjct: 175 NVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLI 234
Query: 68 --------YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHA 118
Y++ Q A+ LF +M + P++ T+ SVL A G GA G+ +H
Sbjct: 235 SWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGAL--GMGKMIHE 292
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ + ++ +G+SL+DMYA+ +D++ +F + +++ +W+A+I G A GE
Sbjct: 293 CIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL 352
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TL 236
AL FS+M+ E +P ++ V +A + G +++G W + + + + + +
Sbjct: 353 ALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEG-WTYFTSMSKVYDVSPKIEHYGCV 411
Query: 237 VDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC 271
VD+ ++G +++A ++ + D + W ++L C
Sbjct: 412 VDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGAC 447
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/602 (37%), Positives = 353/602 (58%), Gaps = 38/602 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L R +H+ ++ S ++I + N+++N Y KC + A K+FD M ++D+V+W
Sbjct: 20 CAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSW 79
Query: 62 TALISGYSQN-----------------DQPENAII--------------LFSQMLRLGLK 90
TA+++ Y+QN D NA+I LF M GL+
Sbjct: 80 TAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLR 139
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN-VYVGSSLLDMYARFDQMDDAW 149
N+FTL S+L+A G G D K RQ+HA G+ N VG+S+++MYAR + D
Sbjct: 140 SNEFTLLSLLEACG-GLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTK 198
Query: 150 FLFTALESKNEVSWNALIAGHARKSEG--EKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
F +LE K V+W+ ++A +A+ +G +A + F EM EG +P ++ S A A+
Sbjct: 199 KAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAA 258
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFV-GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+LE G+ +H SG + V GNT+++MY K GS DA+ VF+++ ++ ++SWNS
Sbjct: 259 MATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNS 318
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKH 325
++ A +G + ++ML G P+ T + +L SHAGLL+ G +F + ++ H
Sbjct: 319 LIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDH 378
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP-IEPTAAVWGALLGACRMHKNVELGAY 384
G+EP VDLL R G LD A + I P + W LL AC+ + + + G
Sbjct: 379 GLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIR 438
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AER+FEL+P SG ++LAN+YAS GR +DA+R RKMM+ VKKEP CSW+E +VH
Sbjct: 439 CAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVH 498
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F++ + HP+ I ++ +++ ++++ GYVPD+++V+ ++ ++E L HSE+LA+
Sbjct: 499 EFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAI 558
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
F L+ST PG TI + KN+RVC DCH+A K S VV REI+VRD++RFHHF+ G CSCGD
Sbjct: 559 VFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGD 618
Query: 565 YW 566
+W
Sbjct: 619 FW 620
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 42/364 (11%)
Query: 88 GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
G +P++ L A A D GRQ+H+ + G N+ + +SL++MY + +
Sbjct: 5 GTRPDKVVFVIALDACAASGELDH-GRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPC 63
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR------------------- 188
A +F + ++ VSW A++A +A+ +AL F M R
Sbjct: 64 AEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKF 123
Query: 189 ------------EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF-VGNT 235
EG F+ S+ A L+ + +HA G + VGN+
Sbjct: 124 QDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNS 183
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH--GLGKATVRWFEKMLRNGIA 293
+V+MYA+ GS+ D +K F+ L ++ +V+W+ ML AQ G G+ ++F++M GI
Sbjct: 184 VVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIK 243
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALK 352
P +VTF+ L AC+ L+ G+ G VE T +++ G+ G A
Sbjct: 244 PGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKL 303
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAA--ERIFE-LDPHDSGPHILLANIYAS 409
+MP E W +L+ A H L A ++ E + + DP DSG + + +
Sbjct: 304 VFDQMP-EKCLISWNSLIVA-YAHNGHALEALSSLQEMLLQGFDP-DSGTSVSILYGLSH 360
Query: 410 AGRL 413
AG L
Sbjct: 361 AGLL 364
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
EG P + A A++G L+ G+ +H+ V+ SG + N+LV+MY K +
Sbjct: 4 EGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPC 63
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
AEKVF+ +L RDVVSW +ML AQ+G + FE M R + V++ V+ A
Sbjct: 64 AEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRK----DDVSWNAVINASVG 119
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ F M+ G+ E ++ ++ G GL D LK R++
Sbjct: 120 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACG--GLED--LKLARQI 164
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/561 (39%), Positives = 342/561 (60%), Gaps = 16/561 (2%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGC-LDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
+ S DI NT+++A ++ L AR+LFD MP +D W+AL+SGY+++ QPE
Sbjct: 85 LFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEA 144
Query: 77 AIILFSQMLRLGLKP------NQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD---W 127
A+ L+ +M +P N+FT SS L A+ A + GR++H ++ G D
Sbjct: 145 ALALYRRMQE---EPGNDGADNEFTASSALAAAAAARCG-RAGRELHCHVVRRGIDAAGG 200
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ + S+L DMYA+ ++DDA +F + ++ VSW A++ + G + R F ML
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 188 R-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R G P F+Y+ V A A G+ VH + KSG F + L+ MY+K G +
Sbjct: 261 RTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A +VF + K D+VSW ++++G AQ+G + +R+F+ LR+GI P+ VTF+ VL+AC
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380
Query: 307 SHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+HAGL+D+G F ++ +++ +E HY +DLL R+G +RA K I M ++P +
Sbjct: 381 AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFL 440
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W +LLG CR+HKNV L AAE +FE++P + ++ LANIYAS G ++ R++M+
Sbjct: 441 WASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G+ K PA SW+E VH+F+ D +HP+ I+ +++ K+ + GYV D VL
Sbjct: 501 KGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+ +++E + HSE+LA+AF +I+TP GS I + KN+R+CGDCH+A K S++V+R+II
Sbjct: 561 VEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDII 620
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD+NRFHHF+DG CSC DYW
Sbjct: 621 VRDSNRFHHFKDGICSCRDYW 641
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C R VH + S + ++ +L Y+KCG + A ++F+ M D+V+W
Sbjct: 279 CAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSW 338
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY+QN QPE A+ F LR G+KP+ T VL A DK H+
Sbjct: 339 TAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKE 398
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
+Y + + ++D+ +R Q + A + + K N+ W +L+ G R +
Sbjct: 399 QYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG-CRIHKNVGLA 457
Query: 181 RTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQ 213
R +E L E EP + +Y ++ AS G ++
Sbjct: 458 RRAAEALFE-IEPENPATYVTLANIYASVGLFDE 490
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 344/605 (56%), Gaps = 50/605 (8%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDMVTWTALIS 66
+E +HA L +A N + + +L Y+ K L AR +FD + + ++ W +I
Sbjct: 30 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 89
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGY 125
Y +N + I+LF +++ L P+ FTL V+K G + G+Q+H LK G+
Sbjct: 90 CYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQE--GKQIHGLALKIGF 146
Query: 126 DWNVYVGSSLLDMYAR----------FDQM-DDAWFLFTALESKNEVSWNALIAGHARKS 174
+V+V SL++MY++ FD M D L+ +L N VSWNA+I G+ +
Sbjct: 147 GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSG 206
Query: 175 EGEKALRTFSEM-------------------------------LREGFEPTHFSYSSVFT 203
+ + AL F +M L+ G P+H + SV +
Sbjct: 207 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 266
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A++ L +G+W+H+++ K+G +L +G +L++MYAK G IE A VF + K+ V
Sbjct: 267 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 326
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALM 322
W +++ G HG+ + F +M + G+ PN + F+ VL AC+HAGL+D+G+ YF +M
Sbjct: 327 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 386
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
++ +EP HY VD+L RAG L+ A I MPI P +W +LLG R H +++G
Sbjct: 387 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 446
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
YAA+R+ E+ P G +ILL+N+YA++G + R+MM + G +K+P CS VE K
Sbjct: 447 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 506
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV-LSYADQQEREAKLQVHSEK 501
+H F+ D +HPQ I+ K E+ EK+K +G+VPD++ V L ++E+EA+L+ HSE+
Sbjct: 507 LHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSER 566
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+AF LI+ PG I I KN+RVC DCHS K SK+ REIIVRD RFHHF++G CS
Sbjct: 567 LAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCS 626
Query: 562 CGDYW 566
C DYW
Sbjct: 627 CMDYW 631
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 49/320 (15%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD---------- 51
C L ++E + +H L F +D+ +Q +++N Y+KCG +D ARK+FD
Sbjct: 125 CARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLW 184
Query: 52 --------------------------------EMPVKDMVTWTALISGYSQNDQPENAII 79
+MP+ D+VTW +I+GY N Q +A+
Sbjct: 185 NSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVK 244
Query: 80 LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMY 139
+F ML+LG +P+ TL SVL A A K GR +H++ K G++ + +G+SL++MY
Sbjct: 245 MFFMMLKLGSRPSHATLVSVLSAVSGLAVLGK-GRWIHSYMEKNGFELDGILGTSLIEMY 303
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
A+ ++ A +F A++ K W A+I G AL F EM + G +P +
Sbjct: 304 AKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFI 363
Query: 200 SVFTALASTGSLEQGKWVHAHVI---KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF-NR 255
V A G ++ G+ ++ K L + LVD+ ++G +E+A+ N
Sbjct: 364 GVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHY--GCLVDILCRAGHLEEAKNTIENM 421
Query: 256 LLKRDVVSWNSMLTGCAQHG 275
+ + V W S+L G HG
Sbjct: 422 PISPNKVIWMSLLGGSRNHG 441
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L + R +H+++ + F+ D + +++ YAKCGC++ A +F + K + WTA+
Sbjct: 271 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAI 330
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCL-K 122
I G + +A+ LF +M + GLKPN VL A AG DD GRQ + +
Sbjct: 331 IVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD--GRQYFDMMMNE 388
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGEK 178
Y + + L+D+ R +++A + S N+V W +L+ G H + GE
Sbjct: 389 YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEY 448
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
A + E+ E T Y + A++G E+ V + K G
Sbjct: 449 AAQRVIEVAPE----TIGCYILLSNMYAASGMWEKVSHVREMMYKRG 491
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 15/249 (6%)
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA--KSGSIEDAEKV 252
H + S+F ++ +EQ +HA +K+ FV + L+ +Y+ K + A +
Sbjct: 16 HNLHLSLFQTCSAPQEVEQ---LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSI 72
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+R+ +R ++ WN+++ ++ + F +++ + P+ T CV+ C+ G++
Sbjct: 73 FDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVV 131
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ L K G + + V++ + G +D A K M I+ +W +L+
Sbjct: 132 QEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDG 190
Query: 373 CRMHKNVELGAY--------AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
+ N + Y A E +++ D L+ Y G+ DA + MM
Sbjct: 191 NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 250
Query: 425 ESGVKKEPA 433
+ G + A
Sbjct: 251 KLGSRPSHA 259
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/477 (43%), Positives = 307/477 (64%), Gaps = 8/477 (1%)
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
+FT S +L A + +VHA +K Y+ + VG++LLD Y + ++++A +F
Sbjct: 1 EFTYSVILTALPVISPS-----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 55
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST-GSL 211
+ ++ K+ V+W+A++AG+A+ E E A++ F E+ + G +P F++SS+ A+T S+
Sbjct: 56 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 115
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
QGK H IKS V + L+ MYAK G+IE AE+VF R ++D+VSWNSM++G
Sbjct: 116 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 175
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPE 330
AQHG + F++M + + + VTF+ V AC+HAGL++EG+ YF +M + + P
Sbjct: 176 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 235
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+ H VDL RAG L++A+K I MP + +W +L ACR+HK ELG AAE+I
Sbjct: 236 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 295
Query: 391 ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAND 450
+ P DS ++LL+N+YA +G + A+ RK+M E VKKEP SW+E KN + F+A D
Sbjct: 296 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 355
Query: 451 DAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIS 510
+HP + I+ K ++S ++K +GY PD+S+VL D + +EA L HSE+LA+AF LI+
Sbjct: 356 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 415
Query: 511 TPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF-RDGFCSCGDYW 566
TP GS + I KN+RVCGDCH K +K+ EREI+VRD+NRFHHF DG CSCGD+W
Sbjct: 416 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 142/263 (53%), Gaps = 2/263 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHA ++ + ++ + +L+AY K G ++EA K+F + KD+V W+A+++GY+Q +
Sbjct: 19 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 78
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E AI +F ++ + G+KPN+FT SS+L A G+Q H F +K D ++ V S
Sbjct: 79 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 138
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+LL MYA+ ++ A +F K+ VSWN++I+G+A+ + KAL F EM + +
Sbjct: 139 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 198
Query: 194 THFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
++ VF A G +E+G K+ V + +VD+Y+++G +E A KV
Sbjct: 199 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 258
Query: 253 FNRLLK-RDVVSWNSMLTGCAQH 274
+ W ++L C H
Sbjct: 259 IENMPNPAGSTIWRTILAACRVH 281
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/570 (37%), Positives = 330/570 (57%), Gaps = 8/570 (1%)
Query: 1 KCTHLKKLKE--ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
KC L++L + A + +HI +F +A + AR LF+ M D+
Sbjct: 38 KCNSLRELMQIQAYAIKSHIEDVSF---VAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
V + ++ GYS+ P LF ++L G+ P+ +T S+LKA ++ GRQ+H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE-GRQLHC 153
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G D NVYV +L++MY + +D A +F + V +NA+I G+AR++ +
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F EM + +P + SV ++ A GSL+ GKW+H + K V L+D
Sbjct: 214 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
M+AK GS++DA +F ++ +D +W++M+ A HG + ++ FE+M + P+++T
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 299 FLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
FL +L ACSH G ++EG+ YF+ M K G+ P HY + VDLL RAG L+ A +FI ++
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI PT +W LL AC H N++L +ERIFELD G +++L+N+YA +
Sbjct: 394 PISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
RK+MK+ K P CS +E N VH F + D +H+ E+ +++K GYVP
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVP 513
Query: 478 DSSHVL-SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
D+S V+ + + QE+E L+ HSEKLA+ F L++TPPG+TI + KN+RVC DCH+A K
Sbjct: 514 DTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLI 573
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + R++++RD RFHHF DG CSCGD+W
Sbjct: 574 SLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/547 (38%), Positives = 329/547 (60%), Gaps = 19/547 (3%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ + +L+ Y + G + EAR LFDEMP +++V+WTA+ISGY+QN + +IL ++
Sbjct: 173 DVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGK----VILARKLF 228
Query: 86 RLGLKPNQFTLSSVL----KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
+ N+ + +++L +A +D F D V ++++ + +
Sbjct: 229 EVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMP---------DHPVAACNAMMVGFGQ 279
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
+D A +F + ++++ +W+A+I + + +AL TF EML G P + S+ S+
Sbjct: 280 HGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISI 339
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
T A+ + + G+ +HA +++ F + L+ MY K G+++ A++VFN +DV
Sbjct: 340 LTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDV 399
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
V WNSM+TG AQHGLG+ + F+ + +AP+ +T++ VLTACS+ G + EG+ F
Sbjct: 400 VMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNS 459
Query: 322 MKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
M + + AHY VDLLGRAGL+D AL I MP+EP A +WGAL+GACRMHKN E
Sbjct: 460 MGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAE 519
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
+ AA+++ EL+P +GP++LL++IY S GR DA+ RK + + K P CSW+E
Sbjct: 520 IAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYN 579
Query: 441 NAVHMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHS 499
VH+F + D +HP+ A+I E+ + + GY D S VL D++++ L+ HS
Sbjct: 580 KMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHS 639
Query: 500 EKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGF 559
E+ A+A+ L+ P G I + KN+RVCGDCHSA K +K+ REII+RD NRFHHF+DG
Sbjct: 640 ERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGL 699
Query: 560 CSCGDYW 566
CSC DYW
Sbjct: 700 CSCRDYW 706
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 174/441 (39%), Gaps = 68/441 (15%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R+ L S+ + N + + G ++ AR FD MP++ ++ ALI+GY +N
Sbjct: 2 RLPSVRFLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRN 61
Query: 72 DQPENAIILFSQM----------------LR-------------LGLKPNQFTLSSVLKA 102
P+ A+ LF +M LR + L P+ + +S+L+
Sbjct: 62 HLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRG 121
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVG--------------------------SSLL 136
R H + + V +G +++L
Sbjct: 122 YVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAML 181
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
Y + ++ +A LF + +N VSW A+I+G+A+ + A + F M +
Sbjct: 182 SGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMP----DRNEV 237
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
S++++ G +E + + + N ++ + + G ++ A+ +F R+
Sbjct: 238 SWTAMLVGYIQAGHVEDAE----DLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERM 293
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
RD +W++M+ Q+ + F +ML GI PN +F+ +LT C+ D G+
Sbjct: 294 CARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGR 353
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRM 375
A M + + + + + + G LD+A + EP V W +++
Sbjct: 354 ELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNM--FEPKDVVMWNSMITGYAQ 411
Query: 376 HKNVE--LGAYAAERIFELDP 394
H E LG + R+ + P
Sbjct: 412 HGLGEEALGIFDDLRLARMAP 432
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L R +HA +L +F D+ + ++ Y KCG LD+A+++F+ KD+V W
Sbjct: 343 CAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMW 402
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
++I+GY+Q+ E A+ +F + + P+ T VL A S G K GR++
Sbjct: 403 NSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKV--KEGREIFN-- 458
Query: 121 LKYGYDWNVYVG----SSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HAR 172
G + ++ +G S ++D+ R +D+A L + + + + W AL+ H
Sbjct: 459 -SMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKN 517
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
E A + E L G + S ++T STG E
Sbjct: 518 AEIAEVAAKKLLE-LEPGSAGPYVLLSHIYT---STGRWED 554
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/565 (38%), Positives = 321/565 (56%), Gaps = 38/565 (6%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L L+ + +H I+ F ++ + N + + YAKCG +++AR LFD + K++V+W
Sbjct: 167 QLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNL 226
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+ISGY++N QPE I L QM G P+Q T+S+++ A
Sbjct: 227 MISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------- 265
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
Y + ++D+A +F+ + K+ V W A++ G+A+ E AL F
Sbjct: 266 ---------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLF 310
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+EML E EP ++ SSV ++ A SL G+ VH I +G V + L+DMY+K
Sbjct: 311 NEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKC 370
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G I+DA VFN + R+VVSWN+M+ GCAQ+G K + FE ML+ P+ VTF+ +L
Sbjct: 371 GFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGIL 430
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+AC H +++GQ YF ++ +HG+ P HY V+LLGR G +++A+ I+ M +P
Sbjct: 431 SACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPD 490
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W LL C ++ AA +FELDP + P+I+L+N+YAS GR D A R +
Sbjct: 491 FLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNL 550
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK VKK SW+E N VH F + D HP+ I++K + K+++ G+ P+++ V
Sbjct: 551 MKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLV 610
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPG-STIHIKKNIRVCGDCHSAFKFASKVVE 541
L + E+ + HSEKLALAF LI P G S I I KNIR+C DCH KFAS+++
Sbjct: 611 LHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIG 670
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+II+RD+NRFHHF G CSC D W
Sbjct: 671 RQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 178/367 (48%), Gaps = 41/367 (11%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
KL++A+ ++ K DI N +L+AYAK G + + FD MP +D V++ I+
Sbjct: 73 KLRDAQ----NLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIA 128
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G+S N P+ ++ LF +M R G +P ++T+ S+L AS A +D ++G+Q+H + +
Sbjct: 129 GFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNAS-AQLSDLRYGKQIHGSIIVRNFL 187
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
NV++ ++L DMYA+ +++ A +LF L KN VSWN +I+G+A+ + EK + +M
Sbjct: 188 GNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM 247
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G P + S++ A Y + G +
Sbjct: 248 RLSGHMPDQVTMSTIIAA-----------------------------------YCQCGRV 272
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
++A +VF+ ++D+V W +M+ G A++G + + F +ML I P+ T V+++C
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L GQ G+ +D+ + G +D A MP + W
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS-W 391
Query: 367 GALLGAC 373
A++ C
Sbjct: 392 NAMIVGC 398
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 24/356 (6%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+++ ++LL YA+ + + F + ++ VS+N IAG + S +++L F M
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
REGFEPT ++ S+ A A L GK +H +I F+ N L DMYAK G IE
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A +F+ L K+++VSWN M++G A++G + + +M +G P+QVT ++ A
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAA 364
G +DE + F+ K+ + A V + + G + AL EM IEP +
Sbjct: 268 QCGRVDEARRVFSEFKEKDIVCWTAMMVGY----AKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 365 VWGALLGACRMHKNVELG-AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+++ +C ++ G A + I ++ L ++Y+ G ++DA +M
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
V SW NA+ + A + H + A+ E+ E + Q + PD+
Sbjct: 384 PTRNV-----VSW----NAMIVGCA-QNGHDKDAL------ELFENMLQQKFKPDN 423
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH + + N++ + + +++ Y+KCG +D+AR +F+ MP +++V+W
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
A+I G +QN ++A+ LF ML+ KP+ T +L A
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVG 233
+ + LR ++L T +Y+ + T + Q K + +H+ Q +F+
Sbjct: 2 KAKSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLH 61
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGI 292
N L+ +YAK G + DA+ +F+++LKRD+ SWN++L+ A+ G + F++M R+ +
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
+ N + S E F M++ G EP E V+ ++
Sbjct: 122 SYNT-----TIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILN 163
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 327/571 (57%), Gaps = 15/571 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIA---------MQNTILNAYAKCGCLDEARKLFDEM--PVK 56
LK + ILGS F I +Q +++ Y K +D ARK+F+E K
Sbjct: 56 LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRK 115
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
V + AL+SGY N + A++LF QM G+ N TL ++ A + + G +
Sbjct: 116 LTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPAC-VSPINLELGSSL 174
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H LKYG+D +V V + + MY + ++ A LF + K +SWNA+++G+A+
Sbjct: 175 HCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLA 234
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
L + M G P + V ++ A+ G+ G V + SG F+ N L
Sbjct: 235 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNAL 294
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++MYA+ G++ A+ VF+ + +R +VSW +++ G HG G+ V+ F++M+R+GI P+
Sbjct: 295 INMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDG 354
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
F+CVL+ACSHAGL D+G YF +MK+ + +EP HY VDLLGRAG L A I
Sbjct: 355 TAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIE 414
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MPI+P AVWGALLGAC++HKNVEL A ER+ EL+P + G ++LL+NIY++A
Sbjct: 415 SMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKG 474
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R R MMKE +KK+P CS+VE K VH F+ D H Q I++ E+ I Q
Sbjct: 475 VLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFG 534
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
P+ + ++ ++ VHSEKLA+AF L++T G+ + I KN+R+C DCH FK
Sbjct: 535 KPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKM 592
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+V R++ VRD RFHHFR+G CSC DYW
Sbjct: 593 VSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 157/306 (51%), Gaps = 7/306 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ +H L F +D+++ N + Y KCG ++ A+KLFDEMPVK +++W
Sbjct: 162 CVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISW 221
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A++SGY+QN N + L+ M G+ P+ TL VL +S A G +V
Sbjct: 222 NAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVL-SSCANLGAQSVGHEVEFKIQ 280
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ N ++ ++L++MYAR + A +F + + VSW A+I G+ GE A++
Sbjct: 281 ASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQ 340
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F EM+R G EP ++ V +A + G +QG + ++K QL + +VD+
Sbjct: 341 LFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG-LEYFKMMKRNYQLEPGPEHYSCMVDL 399
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
++G +++A+ + + +K D W ++L C H + FE+++ + P +
Sbjct: 400 LGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIG 457
Query: 299 FLCVLT 304
+ +L+
Sbjct: 458 YYVLLS 463
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 172/370 (46%), Gaps = 7/370 (1%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W + ++ Q A+ L+ QMLR G +PN FT LK S A + G Q H
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALK-SCAALSLPILGSQFHGQI 75
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEK 178
K G + +V + L+ MY + +D+A +F K V +NAL++G+ S+ +
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F +M EG + + A S +LE G +H +K G V N +
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K GS+ A+K+F+ + + ++SWN+M++G AQ+GL + + M NG+ P+ VT
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL++C++ G G ++ G +++ R G L +A MP
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDA 416
E T W A++G MH + E+ + + ++P D + + + + AG +
Sbjct: 316 -ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP-DGTAFVCVLSACSHAGLTDQG 373
Query: 417 ARARKMMKES 426
KMMK +
Sbjct: 374 LEYFKMMKRN 383
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/597 (38%), Positives = 332/597 (55%), Gaps = 76/597 (12%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L++ + +HAHI+ + F + + + LN + G A+ W +
Sbjct: 88 LSTLEQTKQIHAHIIKTHFHHALQIP---LNDFPS-GLSPSAQ-------------WNFV 130
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ Y++ +QP NA+ +++Q+ ++ + + F SVLKA G + + G+++H F LK G
Sbjct: 131 ITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQ-VSWTQLGKEIHGFVLKKG 189
Query: 125 YDWNVYVG-----------------------------------SSLLDMYARFDQMDDAW 149
D +V+VG ++LLDMYA+ + A
Sbjct: 190 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLAR 249
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF L K VSW A+IAG R + E+ + F M E P + +
Sbjct: 250 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN--------- 300
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
K ++ + LVDMYAK G I A ++F + RD+ WN+++T
Sbjct: 301 -------------KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIIT 347
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVE 328
G A HG G+ + F +M R G+ PN +TF+ +L ACSHAGL+ EG+ F ++ G+
Sbjct: 348 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV 407
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
P+ HY VDLLGRAGLLD A + I+ MPI+P VWGAL+ ACR+HKN +LG AA +
Sbjct: 408 PQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQ 467
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+ E++P + G ++L++NIYA+A R +DAA RK MK G+KKEP S +E VH F+
Sbjct: 468 LLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLM 527
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D +HPQ I++ E+ K+ + GYVPD+S VL D++E+E L HSEKLA+AF L
Sbjct: 528 GDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGL 587
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
IST P + I I KN+RVC DCH+A K SK+ R IIVRD NRFHHFR+G+CSCGDY
Sbjct: 588 ISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/609 (37%), Positives = 348/609 (57%), Gaps = 50/609 (8%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDE---ARKLFDEMPVKD 57
KC + +L++ H+ I+ + + ++N A+ D A KLFD +P D
Sbjct: 31 KCQSMSQLRQ---YHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPD 87
Query: 58 MVTWTALISGYSQNDQ-PENAIIL-FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQ 115
+ +I G+ + P N+I+L +S ML+ + PN FT S+L A + G Q
Sbjct: 88 AFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIA----CRKIQHGMQ 143
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQM------------------------------ 145
+HA K+G+ + +SL+ MY F +
Sbjct: 144 IHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGL 203
Query: 146 -DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT-HFSYSSVFT 203
D+A+ +F + KN SWNA++A + + + +A F M E F +++ +
Sbjct: 204 IDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLS 263
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDV 261
A G+L+QGKW+H ++ ++G +L + + +VDMY K G +E A +VF+ L R +
Sbjct: 264 ACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWI 323
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
SWN M+ G A HG G+A ++ F++M R +AP+ +TFL +LTAC+H+GL++EG+ YF+
Sbjct: 324 SSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSY 383
Query: 322 M-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
M + +G+EP H+ VDLLGRAG++ A K I EMP+ P V G LLGAC+ H+N+E
Sbjct: 384 MIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIE 443
Query: 381 LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETK 440
LG R+ EL+P++SG ++LLAN+YA+AG+ DAA+ RK+M + GVKK P S +E +
Sbjct: 444 LGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQ 503
Query: 441 NAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL---SYADQQEREAKLQV 497
VH F+A + HPQ +H K E+ E +K +GYV D++ VL + ++++ E L
Sbjct: 504 GTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYY 563
Query: 498 HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRD 557
HSEKLA+AF L T PG T+ I KN+R+C DCH A K S V +REIIVRD RFH F+
Sbjct: 564 HSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKM 623
Query: 558 GFCSCGDYW 566
G CSC DYW
Sbjct: 624 GQCSCQDYW 632
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/587 (38%), Positives = 324/587 (55%), Gaps = 32/587 (5%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R VHAH++ + + +++ AYA G AR L E V W ALISG+++
Sbjct: 63 RAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRC 122
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ A F M R G P T SVL A G G D G QVH + G ++ V
Sbjct: 123 RRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRV 182
Query: 132 GSSLLDMYARFDQMDDAWFLFTALE-------------------------------SKNE 160
++L+DMYA M+ AW LF ++ ++
Sbjct: 183 ENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDT 242
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
VSW A+I G+ + + +AL F EM F+ SV TA A G+LE G+WV +
Sbjct: 243 VSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVY 302
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
+ + G ++ AFVGN L+DMY+K GSIE A VF + RD +W +++ G A +G G+
Sbjct: 303 MSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEA 362
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVD 339
+ F +M+ P++VTF+ VLTAC+HAGL+D+G+ +F M++ + + P HY +D
Sbjct: 363 IEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIID 422
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
L GRAG + AL I +MP+ P + +WG LL ACR+H N E+G ER+ ++DP +S
Sbjct: 423 LFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTV 482
Query: 400 HILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMI 459
+ LL+NIYA R D R R + E G+KKEP CS +E +H FVA D +HP I
Sbjct: 483 YTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEI 542
Query: 460 HKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHI 519
+ K I + +GY PD + V ++E++ L HSEKLA+AFAL+S+ P + I I
Sbjct: 543 YCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRI 602
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+R+C DCH+A K S++ RE++VRD RFHHFR GFCSC DYW
Sbjct: 603 VKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 12/210 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ V ++ K D + N +++ Y+KCG ++ A +F +M +D TW
Sbjct: 287 CAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTW 346
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I G + N E AI +F +M+ + P++ T VL A DK +
Sbjct: 347 TAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRE 406
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
Y NV ++D++ R ++ +A + + N W L+A H GE
Sbjct: 407 TYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGE 466
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+M E S+V+T L++
Sbjct: 467 LVTERLLQMDPEN--------STVYTLLSN 488
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 13/260 (5%)
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E A+ ++ ML G P +++ + A+A S + VHAHV+K G A V +L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG---CAQHGLGKATVRWFEKMLRNGIA 293
V YA G A + + + V WN++++G C + G + F M R G A
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCS---FVDMARAGAA 141
Query: 294 PNQVTFLCVLTACSHA-GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P VT++ VL+AC G + G + GV P+ VD+ ++ A K
Sbjct: 142 PTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWK 201
Query: 353 FIREMPIEPTAAVWGALL-GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
M + + W +LL G R+ + E A + + D+ + + Y A
Sbjct: 202 LFDGMQVRSVVS-WTSLLSGLTRLGRVDE----ARDLFGRMPERDTVSWTAMIDGYVQAA 256
Query: 412 RLNDAARARKMMKESGVKKE 431
R +A + M+ S V +
Sbjct: 257 RFREALEMFREMQCSNVSAD 276
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/591 (39%), Positives = 334/591 (56%), Gaps = 37/591 (6%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
+ A +HA ++ +D A+ + AYA G LD + L + +T+ I +
Sbjct: 38 RRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAH 97
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
S + L S ML GL P TLS+ L A + GR +HA+ K +
Sbjct: 98 SSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLS----LGRALHAYAFKLALSGD 153
Query: 129 VYVGSSLLDMYAR----------FDQM---------------------DDAWFLFTALES 157
YV ++LL MYAR FD+M DDA LF L
Sbjct: 154 SYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPR 213
Query: 158 KNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV 217
K+ + WNA+I G+ + + +AL+ F MLR EP + V +A+A G++E GKW+
Sbjct: 214 KDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWL 273
Query: 218 HAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
H++V S QL V LVDMY K GS+EDA VF+ + +D+V WN+M+ G A HG
Sbjct: 274 HSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGD 333
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYV 335
+ + F ++ G+ P +TF+ +L ACSH+GL++EG+ +F M+ ++G++P+ HY
Sbjct: 334 SRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYG 393
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VDLLGRAGL++ A ++ + I P A +W +LL ACR+HKN+ LG A+ +
Sbjct: 394 CMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLA 453
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+SG +ILL+NIYA+ G+ + AR R MMK SG++KEP CS +E V+ FVA D +HP
Sbjct: 454 NSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPC 513
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I+ +++ +K+ G+VP + VL D+ +E L VHSEKLA+AF LIS+ PGS
Sbjct: 514 TDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGS 573
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
TI I KN+R C DCH+ K SK+ R+I+ RD NRFHHF DG C+CGDYW
Sbjct: 574 TIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 46/364 (12%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM------------ 53
+ L R +HA+ A D + +L+ YA+ G AR LFDEM
Sbjct: 133 RGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAML 192
Query: 54 -------------------PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQF 94
P KD + W A+I GY+Q+ +P A+ LF +MLR +P++
Sbjct: 193 TCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEV 252
Query: 95 TLSSVLKASGAGATDDKFGRQVHAF-----CLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
T+ VL A T + G+ +H++ C++ NV V ++L+DMY + ++DA
Sbjct: 253 TVVLVLSAVAQLGTVES-GKWLHSYVKNSRCVQL----NVRVATALVDMYCKCGSLEDAV 307
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + +K+ V WNA+I G+A + KAL F ++ +G PT ++ + A + +G
Sbjct: 308 AVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSG 367
Query: 210 SLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNS 266
+E+G+ + G + G +VD+ ++G IE+A + L + D V W S
Sbjct: 368 LVEEGRSFFQSMEHEYGIDPKIEHYG-CMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVS 426
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
+L C H R + ++ NG+A N ++ + + G +E ++MK G
Sbjct: 427 LLAACRLHKNMALGQRIADFLVANGLA-NSGMYILLSNIYAAVGKWEEVARVRSMMKASG 485
Query: 327 VEPE 330
++ E
Sbjct: 486 IQKE 489
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/549 (39%), Positives = 326/549 (59%), Gaps = 24/549 (4%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++ Y + G + EARK+FD+MP +++V+WTA+I GY Q E A +LF +M
Sbjct: 29 NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRM------ 82
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P + +S + G D + F + D V ++++D ++ +A
Sbjct: 83 PERNVVSWTVMLGGL-IEDGRVDEARQLFDMMPVKD--VVASTNMIDGLCSEGRLIEARE 139
Query: 151 LFTALESKNEVSWNALIAG-------------HARKSEGEKALRTFSEMLREGFEPTHFS 197
+F + +N V+W ++I+G + RK +AL FS M REG P+ S
Sbjct: 140 IFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPS 199
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
SV + S SL+ G+ VH+ +++S + +V + L+ MY K G + A++VF+R
Sbjct: 200 VISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFS 259
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+D+V WNS++ G AQHG G+ + F M + IAP+++TF+ VL+ACS+ G + EG
Sbjct: 260 SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLE 319
Query: 318 YFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
F MK K+ V+P+ HY VDLLGRAG L+ A+ I MP+E A VWGALLGACR H
Sbjct: 320 IFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
KN++L AA+++ +L+P+++GP+ILL+N+Y+S R D RK M+ ++K P CSW
Sbjct: 380 KNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSW 439
Query: 437 VETKNAVHMFV-ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
+E VH+F +HP+ MI KK ++ +++ GY PD S V+ D++E+ L
Sbjct: 440 IEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSL 499
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
+ HSEKLA+A+ L+ P G I + KN+RVCGD HS K ++V REII+RDTNRFHHF
Sbjct: 500 RDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHF 559
Query: 556 RDGFCSCGD 564
+DG CSC D
Sbjct: 560 KDGLCSCSD 568
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 140/265 (52%), Gaps = 18/265 (6%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG-------------YSQND 72
D+ +++ G L EAR++FDEMP +++V WT++ISG Y +
Sbjct: 117 DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG 176
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
A+ LFS M R G++P+ ++ SVL G+ A+ D GRQVH+ ++ +D ++YV
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDH-GRQVHSQLVRSQFDIDIYVS 235
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S L+ MY + + A +F SK+ V WN++IAG+A+ GEKAL F +M
Sbjct: 236 SVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIA 295
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAE 250
P ++ V +A + TG +++G + +KS Q+ + +VD+ ++G + +A
Sbjct: 296 PDEITFIGVLSACSYTGKVKEGLEIFES-MKSKYQVDPKTEHYACMVDLLGRAGKLNEAM 354
Query: 251 KVF-NRLLKRDVVSWNSMLTGCAQH 274
+ N ++ D + W ++L C H
Sbjct: 355 NLIENMPVEADAIVWGALLGACRTH 379
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VH+ ++ S F DI + + ++ Y KCG L A+++FD KD+V W
Sbjct: 207 CGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMW 266
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I+GY+Q+ E A+ +F M + P++ T VL A + +
Sbjct: 267 NSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKS 326
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
KY D + ++D+ R ++++A L + + + + W AL+
Sbjct: 327 KYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLG 374
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 33/207 (15%)
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y ++ +A K+F+++ + + +SWN +++G Q+G+ + F+KM N V++
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPER----NVVSW 59
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG---RAGLLDRALKFIRE 356
++ GL++E + F M + V V++ +LG G +D A +
Sbjct: 60 TAMIRGYVQEGLIEEAELLFWRMPERNV-------VSWTVMLGGLIEDGRVDEARQLFDM 112
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH--------------DSGPHIL 402
MP++ A + G C + +E A IF+ P D G
Sbjct: 113 MPVKDVVASTNMIDGLCSEGRLIE-----AREIFDEMPQRNVVAWTSMISGEKDDGTWST 167
Query: 403 LANIYASAGRLNDAARARKMMKESGVK 429
+ IY G +A +M+ GV+
Sbjct: 168 MIKIYERKGFELEALALFSLMQREGVR 194
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 328/571 (57%), Gaps = 15/571 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIA---------MQNTILNAYAKCGCLDEARKLFDEM--PVK 56
LK + ILGS F I +Q +++ Y K +D ARK+F+E K
Sbjct: 47 LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRK 106
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
V + AL+SGY N + +A++LF QM G+ N TL ++ A + + G +
Sbjct: 107 LTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPAC-VSPINLELGSSL 165
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H LKYG+D +V V + + MY + ++ A LF + K +SWNA+++G+A+
Sbjct: 166 HCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLA 225
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
L + M G P + V ++ A+ G+ G V + SG F+ N L
Sbjct: 226 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNAL 285
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++MYA+ G++ A+ VF+ + +R +VSW +++ G HG G+ V+ F++M+R+GI P+
Sbjct: 286 INMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDG 345
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
F+CVL+ACSHAGL D+G YF +MK+ + +EP HY VDLLGRAG L A I
Sbjct: 346 TAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIE 405
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MPI+P AVWGALLGAC++HKNVEL A ER+ EL+P + G ++LL+NIY++A
Sbjct: 406 SMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKG 465
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R R MMKE +KK+P CS+VE K VH F+ D H Q I++ E+ I Q
Sbjct: 466 VLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFG 525
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
P+ + ++ ++ VHSEKLA+AF L++T G+ + I KN+R+C DCH FK
Sbjct: 526 KPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKM 583
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+V R++ VRD RFHHFR+G CSC DYW
Sbjct: 584 VSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 157/306 (51%), Gaps = 7/306 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ +H L F +D+++ N + Y KCG ++ A+KLFDEMPVK +++W
Sbjct: 153 CVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISW 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A++SGY+QN N + L+ M G+ P+ TL VL +S A G +V
Sbjct: 213 NAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVL-SSCANLGAQSVGHEVEFKMQ 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G+ N ++ ++L++MYAR + A +F + + VSW A+I G+ GE A++
Sbjct: 272 ASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQ 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDM 239
F EM+R G EP ++ V +A + G +QG + ++K QL + +VD+
Sbjct: 332 LFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG-LEYFKMMKRNYQLEPGPEHYSCMVDL 390
Query: 240 YAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
++G +++A+ + + +K D W ++L C H + FE+++ + P +
Sbjct: 391 LGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIG 448
Query: 299 FLCVLT 304
+ +L+
Sbjct: 449 YYVLLS 454
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 171/370 (46%), Gaps = 7/370 (1%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W + ++ Q A+ L+ QMLR G +PN FT LK S A + G Q H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALK-SCAALSLPILGSQFHGQI 66
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEK 178
K G + +V + L+ MY + +D+A +F K V +NAL++G+ S+
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F +M EG + + A S +LE G +H +K G V N +
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K GS+ A+K+F+ + + ++SWN+M++G AQ+GL + + M NG+ P+ VT
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL++C++ G G M+ G +++ R G L +A MP
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAGRLNDA 416
E T W A++G MH + E+ + + ++P D + + + + AG +
Sbjct: 307 -ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP-DGTAFVCVLSACSHAGLTDQG 364
Query: 417 ARARKMMKES 426
KMMK +
Sbjct: 365 LEYFKMMKRN 374
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 345/586 (58%), Gaps = 23/586 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +++ + VH + + +M N++ Y K G L+ + F P K+++TW
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 246
Query: 62 TALISGYSQNDQPEN-AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T +IS ++++ + + LF ML G+ PN+FTL+SV+ GA D G+QV AFC
Sbjct: 247 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGA-RLDMSLGKQVQAFC 305
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-------- 172
K G + N+ V +S + +Y R + D+A LF ++S + ++WNA+I+G+A+
Sbjct: 306 YKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDD 365
Query: 173 ---KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+S G +AL+ F +++R +P F++SS+ + ++ +LEQG+ +HA+ IK+G
Sbjct: 366 LHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSD 425
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
V + LV+MY K GSIE A K F + R V+W SM++G +QHG + ++ FE M+
Sbjct: 426 VVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVL 485
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLD 348
+G PN++TF+ +L+ACS+AGL++E + YF +M+ ++ +EP HY VD+ R G LD
Sbjct: 486 SGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLD 545
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYA 408
A FI+ EP A+W +L+ CR H N+EL YAA+R+ EL P ++LL N+Y
Sbjct: 546 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYI 605
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISE 468
S GR D AR RK+ K V SW+ ++ V+ F A+D HPQ +++ + E
Sbjct: 606 STGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLE 665
Query: 469 KIKQIGYVPDSSHVLSYADQQERE---------AKLQVHSEKLALAFALISTPPGSTIHI 519
K K +GY P + D +E + + ++ HSE+LA+A L+ TPPG+T+ +
Sbjct: 666 KAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRV 725
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
KNI +C DCHS+ K+ S + REI+VRD+ R H F+DG CSCGD+
Sbjct: 726 TKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 194/388 (50%), Gaps = 14/388 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L AR +H H++ + D+ + +++N Y +C +AR+LFD MP K++VT
Sbjct: 85 RCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVT 144
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTALI+G++ N +P A+ +F +ML LG P+ +TL +L A A D G+QVH +
Sbjct: 145 WTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRID-LGQQVHGYS 203
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-KSEGEKA 179
+KYG D +G+SL +Y + ++ F KN ++W +I+ A ++ +
Sbjct: 204 IKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLG 263
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F +ML G P F+ +SV + + + GK V A K G + V N+ + +
Sbjct: 264 LSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYL 323
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----------HGLGKATVRWFEKML 288
Y + G ++A ++F + +++WN+M++G AQ G ++ F ++
Sbjct: 324 YLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLV 383
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
R+ + P+ TF +L+ CS L++G+ A K G + V++ + G ++
Sbjct: 384 RSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIE 443
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMH 376
A K EMP T W +++ H
Sbjct: 444 CATKAFVEMPTR-TPVTWTSMISGYSQH 470
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 13/279 (4%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
L ++A G GA R +H +K G +++V +SL+++Y R DA LF +
Sbjct: 83 LHRCVEAGGLGA-----ARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGM 137
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
KN V+W ALI GH SE AL F EML G P+H++ + +A ++ ++ G+
Sbjct: 138 PDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQ 197
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH- 274
VH + IK G + +GN+L +Y KSG +E + F ++V++W +M++ CA+
Sbjct: 198 QVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDE 257
Query: 275 ---GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
LG + F ML G+ PN+ T V++ C + G+ A K G E
Sbjct: 258 NYLDLG---LSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 314
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + L R G D A++ EM + W A++
Sbjct: 315 PVKNSTMYLYLRKGETDEAMRLFEEMD-SSSIITWNAMI 352
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
MLR+G Y + G L + +H H++K+G FV +LV++Y + S
Sbjct: 67 MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
DA ++F+ + ++VV+W +++TG + + F +ML G P+ T +L+A
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
CS A +D GQ K+G + + + L ++G L+ L+ + P +
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTP-DKNVIT 245
Query: 366 WGALLGACRMHKN-VELG 382
W ++ +C +N ++LG
Sbjct: 246 WTTMISSCAEDENYLDLG 263
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 345/605 (57%), Gaps = 46/605 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKL--FDEMPVKDMV 59
CT ++K+ VHAHI+ + + ++ K + L F ++ +
Sbjct: 52 CTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPF 108
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA- 118
WTA+I GY+ + +++M R G+ P FT S++ KA GA D G+QVHA
Sbjct: 109 LWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMD-LGKQVHAQ 167
Query: 119 FCLKYGYDWNVYVGSSLLDMY-------------------------------ARFDQMDD 147
L G+ ++YVG+S++D+Y A++ M+
Sbjct: 168 TILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMES 227
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF L K+ V+W A++ G+A+ ++AL F +M G E + + V +A A
Sbjct: 228 ASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ 287
Query: 208 TGSLEQGKWVHAHVIKSG----GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
G+++ W+ +SG G +V VG+ L+DMY+K GS ++A KVF + +R+V S
Sbjct: 288 LGAVKHANWIRDIAERSGFGPSGNVV--VGSALIDMYSKCGSPDEAYKVFEVMKERNVFS 345
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++SM+ G A HG + ++ F ML+ I PN+VTF+ +L+ACSHAGL+++G+ FA M+
Sbjct: 346 YSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKME 405
Query: 324 KH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K GV P HY VDLLGRAG L+ AL ++ MP+EP VWGALLGACR+H N ++
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIA 465
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
AA +F+L+P+ G +ILL+NIYASAGR + ++ RK+++E G KK P CSW E KN
Sbjct: 466 QIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNG 525
Query: 443 -VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+H F A D HP+ + I + +++ E+++ GY P+ E+E L HSEK
Sbjct: 526 EIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEK 585
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LALA+ L+ T G TI I KNIR+C DCH+ AS++ REIIVRD RFHHF +G CS
Sbjct: 586 LALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCS 645
Query: 562 CGDYW 566
CG++W
Sbjct: 646 CGNFW 650
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 339/574 (59%), Gaps = 51/574 (8%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN--AIILFSQMLRLG-LKPNQFTLSSV 99
LD A K+F++MP ++ +W +I G+S++D+ + AI LF +M+ ++PN+FT SV
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA----------- 148
LKA + G+Q+H LKYG+ + +V S+L+ MY M DA
Sbjct: 128 LKACAKTGKIQQ-GKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIER 186
Query: 149 -----------------W-----------------FLFTALESKNEVSWNALIAGHARKS 174
W LF + ++ VSWN +I+G+++
Sbjct: 187 EMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNG 246
Query: 175 EGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ A+ F EM + E P + + SV A++ GSLE G+W+H + SG ++ +G
Sbjct: 247 FFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLG 306
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ L+DMY+K G IE A VF RL + +V++W++M+ G A HG + F KM + G+
Sbjct: 307 SALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 366
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+ V ++ +LTACSHAGL++EG+ YF+ M G+EP HY VDLLGR GLLD A +
Sbjct: 367 PSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEE 426
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
FI MPI+P +W ALLGACRMH+NVE+G A + ++ PHDSG ++ L+N+YAS G
Sbjct: 427 FILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 486
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
++ + R MKE ++K+P CSW++ +H F+ DD+HP+ I+ EIS+K++
Sbjct: 487 WSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRL 546
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
GY P ++ VL +++++E L HSEK+A AF LIST PG I I KN+R+C DCHS+
Sbjct: 547 AGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSS 606
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SKV +R+I VRD RFHHF+DG CSC DYW
Sbjct: 607 IKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 132/253 (52%), Gaps = 6/253 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
++ + N +++ Y + G AR LFD+M + +V+W +ISGYSQN ++A+ +F +M
Sbjct: 200 EVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMK 259
Query: 86 R-LGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
+ ++PN TL SVL A S G+ + G +H + G + +GS+L+DMY++
Sbjct: 260 KGEDIRPNYVTLVSVLPAVSRLGSLE--LGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 317
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++ A +F L +N ++W+A+I G A + A+ F +M + G P+ +Y ++ T
Sbjct: 318 IIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 377
Query: 204 ALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
A + G +E+G+ + ++ G + G + + E E + N +K D
Sbjct: 378 ACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDD 437
Query: 262 VSWNSMLTGCAQH 274
V W ++L C H
Sbjct: 438 VIWKALLGACRMH 450
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 54/315 (17%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFD----QMDDAWFLFTALESKNEVSWNALIAGH 170
Q+HA +K G + + +L A D +D A +F + +N SWN +I G
Sbjct: 34 QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 93
Query: 171 ARKSEGEK--ALRTFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
+ E + A+ F EM+ + F EP F++ SV A A TG ++QGK +H +K G
Sbjct: 94 SESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFG 153
Query: 228 LVAFVGNTLVDMYAKSGSIED--------------------------------------- 248
FV + LV MY G ++D
Sbjct: 154 GDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMR 213
Query: 249 ------AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLC 301
A +F+++ +R VVSWN+M++G +Q+G K V F +M + I PN VT +
Sbjct: 214 LGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVS 273
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL A S G L+ G+ + G+ ++ +D+ + G++++A+ +P E
Sbjct: 274 VLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRE- 332
Query: 362 TAAVWGALLGACRMH 376
W A++ +H
Sbjct: 333 NVITWSAMINGFAIH 347
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L L+ +H + S + D + + +++ Y+KCG +++A +F+ +P ++++TW+
Sbjct: 279 SRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWS 338
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD 110
A+I+G++ + Q +AI F +M + G++P+ ++L A S AG ++
Sbjct: 339 AMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEE 387
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/565 (40%), Positives = 344/565 (60%), Gaps = 15/565 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALISGYSQND 72
+H + F + ++ N + Y+K G L EA +F M ++D V+W ++I Y Q+
Sbjct: 160 LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-RQVHAFCLKYGYDWNVYV 131
+ A+ L+ +M+ G K + FTL+SVL A + D G RQ H +K G+ N +V
Sbjct: 220 EGAKALALYKEMIFKGFKIDMFTLASVLNA--LTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 132 GSSLLDMYARF---DQMDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKALRTFSEML 187
GS L+D Y++ D M D+ +F + S + V WN +I+G++ E E+A+++F +M
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGS 245
R G P S+ V +A ++ S Q K +H IKS ++ V N L+ +Y KSG+
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS-VNNALISLYYKSGN 396
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++DA VF+R+ + + VS+N M+ G AQHG G + +++ML +GIAPN++TF+ VL+A
Sbjct: 397 LQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Query: 306 CSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
C+H G +DEGQ YF MK+ +EPE HY +DLLGRAG L+ A +FI MP +P +
Sbjct: 457 CAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
W ALLGACR HKN+ L AA + + P + P+++LAN+YA A + + A RK M+
Sbjct: 517 AWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMR 576
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL- 483
++K+P CSW+E K H+FVA D +HP +++ E+ +K+K++GYV D +
Sbjct: 577 GKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMV 636
Query: 484 --SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
A + + E +L HSEKLA+AF L+ST G + + KN+R+CGDCH+A KF S V
Sbjct: 637 KEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAG 696
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD RFH F+DG CSCGDYW
Sbjct: 697 REIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 165/283 (58%), Gaps = 8/283 (2%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N I+ AYAK + AR+LFDE+P D V++ LISGY+ + A++LF +M +LG +
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
+ FTLS ++ A +Q+H F + G+D V ++ + Y++ + +A
Sbjct: 138 VDGFTLSGLIAAC---CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 151 LFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + E ++EVSWN++I + + EG KAL + EM+ +GF+ F+ +SV AL S
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE---DAEKVFNRLLKRDVVSWNS 266
L G+ H +IK+G + VG+ L+D Y+K G + D+EKVF +L D+V WN+
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT 314
Query: 267 MLTGCAQH-GLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
M++G + + L + V+ F +M R G P+ +F+CV +ACS+
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
NV+ + ++ YA+ ++ A LF + + VS+N LI+G+A E A+ F M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
+ GFE F+ S + A L K +H + G + V N V Y+K G +
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 248 DAEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+A VF + + RD VSWNSM+ QH G + +++M+ G + T VL A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD---RALKFIREMPIEPTA 363
+ L G+ + + K G +D + G D + K +E+ + P
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDL 309
Query: 364 AVWGALLGACRMHKNV 379
VW ++ M++ +
Sbjct: 310 VVWNTMISGYSMNEEL 325
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 345/586 (58%), Gaps = 23/586 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +++ + VH + + +M N++ Y K G L+ + F P K+++TW
Sbjct: 5 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 64
Query: 62 TALISGYSQNDQPEN-AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T +IS ++++ + + LF ML G+ PN+FTL+SV+ GA D G+QV AFC
Sbjct: 65 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGA-RLDMSLGKQVQAFC 123
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-------- 172
K G + N+ V +S + +Y R + D+A LF ++S + ++WNA+I+G+A+
Sbjct: 124 YKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDD 183
Query: 173 ---KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+S G +AL+ F +++R +P F++SS+ + ++ +LEQG+ +HA+ IK+G
Sbjct: 184 LHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSD 243
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
V + LV+MY K GSIE A K F + R V+W SM++G +QHG + ++ FE M+
Sbjct: 244 VVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVL 303
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLD 348
+G PN++TF+ +L+ACS+AGL++E + YF +M+ ++ +EP HY VD+ R G LD
Sbjct: 304 SGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLD 363
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYA 408
A FI+ EP A+W +L+ CR H N+EL YAA+R+ EL P ++LL N+Y
Sbjct: 364 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYI 423
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISE 468
S GR D AR RK+ K V SW+ ++ V+ F A+D HPQ +++ + E
Sbjct: 424 STGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLE 483
Query: 469 KIKQIGYVPDSSHVLSYADQQERE---------AKLQVHSEKLALAFALISTPPGSTIHI 519
K K +GY P + D +E + + ++ HSE+LA+A L+ TPPG+T+ +
Sbjct: 484 KAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRV 543
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
KNI +C DCHS+ K+ S + REI+VRD+ R H F+DG CSCGD+
Sbjct: 544 TKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 589
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 2/171 (1%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ +A ++ ++ G+ VH + IK G + +GN+L +Y KSG +E + F ++
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60
Query: 261 VVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
V++W +M++ CA+ + F ML G+ PN+ T V++ C + G+
Sbjct: 61 VITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQ 120
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
A K G E + + L R G D A++ EM + W A++
Sbjct: 121 AFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD-SSSIITWNAMI 170
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 338/561 (60%), Gaps = 3/561 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E + V+ + ++D+ + N+ +N + G L +AR+LF++M +D+VTW +I+
Sbjct: 222 LSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITL 281
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN+ A+ LF ++ + G+K N T +L + + K G+ +H + GYD
Sbjct: 282 YVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAK-GKVIHELVKEAGYDR 340
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+ V ++L+ +Y R + AW +F + SK+ ++W + +A+ ++AL+ F EM
Sbjct: 341 DAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ 400
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG PT + +V A +L++G+ +H+H+I++ ++ V L++MY K G +
Sbjct: 401 LEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMA 460
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ KRD++ WNSML AQHG T++ F +M +G+ + V+F+ VL+A S
Sbjct: 461 EAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALS 520
Query: 308 HAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP-IEPTAAV 365
H+G + +G YF A+++ + P Y VDLLGRAG + A+ + ++ P +
Sbjct: 521 HSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGIL 580
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W LLGACR H + AAE++ E DP SG +++L+N+YA+AG + R RK+M+
Sbjct: 581 WMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRS 640
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKKEP S +E N VH F+ D +HP+R I+ + ++ +++ GY+PD+ +L
Sbjct: 641 RGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHD 700
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+ + +E L HSE+LA+AF LISTPPG+ + + KN+RVC DCH+A K+ SK+ REI+
Sbjct: 701 VEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREIL 760
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRDT+RFH+F+DG CSC DYW
Sbjct: 761 VRDTHRFHNFKDGRCSCKDYW 781
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 212/454 (46%), Gaps = 42/454 (9%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C+ K + R VH H+ F+ + + ++ YA+CG + EA+++F+ + KD+
Sbjct: 13 RCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFA 72
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT +I Y Q + A+ +F QM + P + T ++L A A K G ++H
Sbjct: 73 WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNAC-ASTESLKDGMEIHGQI 131
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
L+ G++ +V+VG++L++MY + + AW F LE ++ VSW A+IA + + A
Sbjct: 132 LQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALAR 191
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ M +G P + +VF A L +GK+V+ V + V N+ V+M+
Sbjct: 192 WLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMF 251
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+G + DA ++F ++ RDVV+WN ++T Q+ VR F ++ ++G+ N +TF+
Sbjct: 252 GNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFV 311
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA---------------- 344
+L + L +G+ L+K+ G + + + L GR
Sbjct: 312 LMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSK 371
Query: 345 ---------------GLLDRALKFIREMPIE---PTAAVWGALLGAC----RMHKNVELG 382
G AL+ +EM +E PT+A A+L C + K ++
Sbjct: 372 DVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIH 431
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
++ E F + + L N+Y G++ +A
Sbjct: 432 SHIIENRFRM---EMVVETALINMYGKCGKMAEA 462
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 169/346 (48%), Gaps = 9/346 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L L + +++H + + + D + +++ Y +C +A K+F +M KD++TWT
Sbjct: 318 TSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWT 377
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ Y+QN + A+ LF +M G +P TL +VL A K GRQ+H+ ++
Sbjct: 378 VMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK-GRQIHSHIIE 436
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ + V ++L++MY + +M +A +F + ++ + WN+++ +A+ ++ L+
Sbjct: 437 NRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQL 496
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M +G + S+ SV +AL+ +GS+ G ++ A + + +VD+
Sbjct: 497 FNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLG 556
Query: 242 KSGSIEDAEKVFNRL--LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
++G I++A + +L D + W ++L C H E++L P+
Sbjct: 557 RAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD--PSHSGA 614
Query: 300 LCVLTAC-SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
VL+ + AG D LM+ GV+ E + +++L R
Sbjct: 615 YVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGR--SSIEILNRV 658
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L++ R +H+HI+ + F+ ++ ++ ++N Y KCG + EA +F++M +D++ W
Sbjct: 418 CAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVW 477
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKF 112
+++ Y+Q+ + + LF+QM G+K + + SVL A S +G+ D +
Sbjct: 478 NSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGY 529
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P + ++ +S +++ G+ VH HV G + V L+ MYA+ GS+ +A++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF L ++DV +W M+ Q G + F +M + P +VT++ +L AC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L +G + + G E + +++ + G + A + + + W A++
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAMIA 179
Query: 372 ACRMHKNVELGAYAAERIFELD 393
AC H L + R+ +LD
Sbjct: 180 ACVQHDQFALARWLYRRM-QLD 200
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/565 (38%), Positives = 321/565 (56%), Gaps = 38/565 (6%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L L+ + +H I+ F ++ + N + + YAKCG +++AR LFD + K++V+W
Sbjct: 167 QLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNL 226
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+ISGY++N QPE I L QM G P+Q T+S+++ A
Sbjct: 227 MISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------- 265
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
Y + ++D+A +F+ + K+ V W A++ G+A+ E AL F
Sbjct: 266 ---------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLF 310
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+EML E EP ++ SSV ++ A SL G+ VH I +G V + L+DMY+K
Sbjct: 311 NEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKC 370
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G I+DA VFN + R+VVSWN+M+ GCAQ+G K + FE ML+ P+ VTF+ +L
Sbjct: 371 GFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGIL 430
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+AC H +++GQ YF ++ +HG+ P HY V+LLGR G +++A+ I+ M +P
Sbjct: 431 SACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPD 490
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W LL C ++ AA +FELDP + P+I+L+N+YAS GR D A R +
Sbjct: 491 FLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNL 550
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK VKK SW+E N VH F + D HP+ I++K + K+++ G+ P+++ V
Sbjct: 551 MKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLV 610
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPG-STIHIKKNIRVCGDCHSAFKFASKVVE 541
L + E+ + HSEKLALAF LI P G S I I KNIR+C DCH KFAS+++
Sbjct: 611 LHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIG 670
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+II+RD+NRFHHF G CSC D W
Sbjct: 671 RQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 176/367 (47%), Gaps = 41/367 (11%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
KL++A+ ++ K D N +L+AYAK G + + FD MP +D V++ I+
Sbjct: 73 KLRDAQ----NLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIA 128
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G+S N P+ ++ LF +M R G +P ++T+ S+L AS A D ++G+Q+H + +
Sbjct: 129 GFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNAS-AQLLDLRYGKQIHGSIIVRNFL 187
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
NV++ ++L DMYA+ +++ A +LF L KN VSWN +I+G+A+ + EK + +M
Sbjct: 188 GNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM 247
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G P + S++ A Y + G +
Sbjct: 248 RLSGHMPDQVTMSTIIAA-----------------------------------YCQCGRV 272
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
++A +VF+ ++D+V W +M+ G A++G + + F +ML I P+ T V+++C
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L GQ G+ +D+ + G +D A MP + W
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVS-W 391
Query: 367 GALLGAC 373
A++ C
Sbjct: 392 NAMIVGC 398
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 168/359 (46%), Gaps = 29/359 (8%)
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ WN +LL YA+ + + F + ++ VS+N IAG + S +++L F
Sbjct: 90 FSWN-----ALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M REGFEPT ++ S+ A A L GK +H +I F+ N L DMYAK G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
IE A +F+ L K+++VSWN M++G A++G + + +M +G P+QVT ++
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM---PIEP 361
A G +DE + F+ K+ + A V + + G + AL EM IEP
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY----AKNGREEDALLLFNEMLLEHIEP 320
Query: 362 TAAVWGALLGACRMHKNVELG-AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+ +++ +C ++ G A + I ++ L ++Y+ G ++DA
Sbjct: 321 DSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+M V SW NA+ + A + H + A+ E+ E + Q + PD+
Sbjct: 381 NLMPTRNV-----VSW----NAMIVGCA-QNGHDKDAL------ELFENMLQQKFKPDN 423
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VH + + N++ + + +++ Y+KCG +D+AR +F+ MP +++V+W
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I G +QN ++A+ LF ML+ KP+ T +L A +H +
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSAC------------LHCNWI 439
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G ++ FD + + + L+ + ++ R E+A+
Sbjct: 440 EQGQEY--------------FDSISNQHGMTPTLD-----HYACMVNLLGRTGRIEQAVA 480
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL-VAFVGNTLVDMY 240
M +P +S++ + ++ G + + H+ + + V ++ L +MY
Sbjct: 481 LIKNM---AHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI--MLSNMY 535
Query: 241 AKSGSIEDAEKVFNRLLKRDV 261
A G +D V N + ++V
Sbjct: 536 ASMGRWKDVASVRNLMKSKNV 556
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVG 233
+ + LR ++L T +Y+ + T + Q K + +H+ Q +F+
Sbjct: 2 KAKSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLH 61
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-LRNGI 292
N L+ +YAK G + DA+ +F+++LKRD SWN++L+ A+ G + F++M R+ +
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
+ N + S E F M++ G EP E V+ ++ A LLD
Sbjct: 122 SYNT-----TIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILN--ASAQLLD 170
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/564 (38%), Positives = 333/564 (59%), Gaps = 10/564 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ +H + + DI + +L+ YAK G L +A +LF P +++V + A+I+G+ Q
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 71 NDQPEN-----AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ + A+ LFSQM R G+KP+ FT SS++K + +G+Q+HA K+
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFE-YGKQIHAHICKHNI 350
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ ++GS+L+++Y+ +D F + + VSW +IAG+A+ + E AL F E
Sbjct: 351 QSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYE 410
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+L G +P F +++ +A A + G+ VH + +K+G +A V N+ + MYAKSG+
Sbjct: 411 LLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGN 470
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++ A+ F + DVVSW+ M+ AQHG K + FE M GI PNQ+TFL VLTA
Sbjct: 471 LDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTA 530
Query: 306 CSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
CSH GL++EG Y+ MKK + ++ H VDLL RAG L A FI
Sbjct: 531 CSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPV 590
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
+W LL CR++K++ G + AE++ ELDP +S ++LL NIY AG A + R++MK
Sbjct: 591 MWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMK 650
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
+ G++KEP SW+E N VH FV D +HP +I+KK + EK ++IGY+ ++
Sbjct: 651 DRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVT 710
Query: 485 YADQQEREAKLQV--HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
+ +E + L V HSEKLA++F ++S PP + + + KN+RVC DCH+ K S V +R
Sbjct: 711 IS-TKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKR 769
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
EII+RD+ RFHHF++G CSC DYW
Sbjct: 770 EIILRDSLRFHHFKEGSCSCNDYW 793
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 205/397 (51%), Gaps = 11/397 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +K +++H + + + N +++ Y KC +D AR LF+ D V+W
Sbjct: 120 CGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSW 179
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD-DKFGRQVHAFC 120
+LI+GY++ E + L +M GL+ N FTL S LK+ + +G+ +H +
Sbjct: 180 NSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYT 239
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK-- 178
+K G D ++ VG++LLDMYA+ + DA LF ++N V +NA+IAG + + +K
Sbjct: 240 VKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKEC 299
Query: 179 ---ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
AL+ FS+M R+G +P+ F++SS+ + E GK +HAH+ K Q F+G+T
Sbjct: 300 AYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGST 359
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L+++Y+ GS ED K FN K D+VSW +M+ G AQ+G ++ + F ++L +G P+
Sbjct: 360 LIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPD 419
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+ +L+AC+ G+ K G+ + + + ++G LD A K
Sbjct: 420 EFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSA-KITF 478
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
E P W ++ + H + A A +FEL
Sbjct: 479 EEIKNPDVVSWSVMICSNAQHGH----AKDAINLFEL 511
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 8/355 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
++ HAH++ +AF + + N LN Y+K G + A+KLFD M + ++++ LISGY
Sbjct: 28 GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGG 87
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
AI LFS+ LK ++F+ + VL A G D G+ +H + G V+
Sbjct: 88 MGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ-IKDFALGKVIHGLAIVCGLGQQVF 146
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
+ + L+DMY + +++D A LF + + + VSWN+LI G+AR E+ L+ +M G
Sbjct: 147 LTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTG 206
Query: 191 FEPTHFSYSSVFTA--LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
F+ S + L + GK +H + +K G L VG L+DMYAK+G + D
Sbjct: 207 LRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGD 266
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQ-----HGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
A ++F ++VV +N+M+ G Q ++ F +M R GI P+ TF ++
Sbjct: 267 AIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSII 326
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
C+H + G+ A + KH ++ +E T ++L G + LK P
Sbjct: 327 KICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP 381
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 145/272 (53%), Gaps = 3/272 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H++ + + +HAHI ++D + +T++ Y+ G ++ K F+ P D+V+W
Sbjct: 329 CNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSW 388
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+GY+QN Q E+A+ LF ++L G KP++F ++++L A A ++ G QVH + +
Sbjct: 389 TTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSAC-ADVAAERSGEQVHGYAV 447
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G V +S + MYA+ +D A F +++ + VSW+ +I +A+ + A+
Sbjct: 448 KTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAIN 507
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F M G P ++ V TA + G +E+G + + K + T +VD+
Sbjct: 508 LFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLL 567
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+++G + DA+ + N V W ++L+GC
Sbjct: 568 SRAGRLLDAKNFILNSGFGDHPVMWRTLLSGC 599
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 139/306 (45%), Gaps = 6/306 (1%)
Query: 91 PNQFTLSSV----LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
P+ F L SV L + + G+ HA +K ++ +++ ++ L++Y+++ +M
Sbjct: 2 PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A LF + ++ +S+N LI+G+ KA+ FSE + FSY+ V +A
Sbjct: 62 NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
GK +H I G F+ N L+DMY K I+ A +F + D VSWNS
Sbjct: 122 QIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS 181
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC--SHAGLLDEGQGYFALMKK 324
++TG A+ G + ++ KM G+ N T L +C + ++ G+ K
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVK 241
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G++ + +D+ + G L A++ R P + + G + + AY
Sbjct: 242 QGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY 301
Query: 385 AAERIF 390
A ++F
Sbjct: 302 EALKLF 307
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 331/573 (57%), Gaps = 32/573 (5%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D + T++ + G LDEAR+L + P +++V+WT+LI+GYS+ +P +A+ F+ ML
Sbjct: 170 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 229
Query: 86 RLGLKPNQFTLSSVLKASG--------------------------AGATDDKFGR----- 114
G+ P++ + L A A D + +
Sbjct: 230 SDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIA 289
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q A G ++++D Y + +D A LF + +++ +++N++I G+
Sbjct: 290 QAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSG 349
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
AL+ F +M R G +F+ S+ TA AS G+L G+ +HA + + + ++G
Sbjct: 350 RLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGT 409
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+DMY K G +++A VF+R+ +RDV +W +M+ G A +G+GK + F +M R+G P
Sbjct: 410 ALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQP 469
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
VT++ VLTACSH+ LLDEG+ +F M+ H + P+ HY +DLL R+GLLD A+
Sbjct: 470 TSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHL 529
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
++ MP++P A +WG++L ACR+HKN++L +AAE + +L P + ++ L NIY + +
Sbjct: 530 VQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQW 589
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
DA R R +M+E GVKK S + VH FVAND +HP I EI+ ++K +
Sbjct: 590 ADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSV 649
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GY P +S + D++E+E L HSEK+A+AF LIS PP IHI KN+RVC DCHSA
Sbjct: 650 GYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAI 709
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K S++ REIIVRD +RFHHFRDG CSC D+W
Sbjct: 710 KLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 155/392 (39%), Gaps = 73/392 (18%)
Query: 49 LFDEMPVKDMVTW-TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGA 107
LFD +P + TAL + + ++ ++L +M G++ FT V + AGA
Sbjct: 57 LFDRLPHSTTFLFDTALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGA 116
Query: 108 TDDK-FGRQVHAFCLKYGYDWNV-YVGSSLLDMYARFDQMDDAWFLFTALESK------- 158
+HA CL+ V + L+ MYA DDA F + +K
Sbjct: 117 RARAGLCLMLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWAT 176
Query: 159 ------------------------NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPT 194
N VSW +LIAG++R A+ F+ ML +G P
Sbjct: 177 VIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPD 236
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN---TLVDMYAKSGSIEDAEK 251
+V AL++ L+ + G + + N L+DMYAK G I A+
Sbjct: 237 EV---AVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQA 293
Query: 252 V--------------------------------FNRLLKRDVVSWNSMLTGCAQHGLGKA 279
V F+++ RDV+++NSM+TG G +
Sbjct: 294 VFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRD 353
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
++ F +M R+G+ + T + +LTAC+ G L G+ A +++ VE + +D
Sbjct: 354 ALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLD 413
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+ + G +D A M E W A++
Sbjct: 414 MYMKCGRVDEATAVFHRMG-ERDVHTWTAMIA 444
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +HA I + D+ + +L+ Y KCG +DEA +F M +D+ TW
Sbjct: 380 CASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTW 439
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR------- 114
TA+I+G + N ++A+ F QM R G +P T +VL A + D+ GR
Sbjct: 440 TAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDE-GRLHFNEMR 498
Query: 115 ---QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
++H YG ++D+ AR +D+A L + + N V W ++++
Sbjct: 499 SLHKLHPQVEHYG---------CMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSA 548
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFN---------------------------RLL----KR 259
V N L+ MYA G +DA + F+ RLL +R
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+VVSW S++ G ++ G V F ML +G+AP++V + L+ACS LD G+
Sbjct: 201 NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLH 260
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACRM-HK 377
L+ + + + V +D+ + G + +A + W A++ G C++ H
Sbjct: 261 LLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHV 320
Query: 378 NVELGAY---AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+V + A + + +G Y +GRL DA + M+ G++ +
Sbjct: 321 DVARSLFDQMGARDVITFNSMITG--------YIHSGRLRDALQLFMQMRRHGMRAD 369
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 346/593 (58%), Gaps = 38/593 (6%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMVTWTALISGY 68
+ VH + ++F +D+ + N++++ YA CG LD A +F+ E KD+V+W ++++G+
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGF 318
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
Q P+ A+ LF +M G+ PN T+ SV+ A A + GR+V + + N
Sbjct: 319 VQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSAC-AKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE------------- 175
+ V ++ +DM+ + +++ A LF +E ++ VSW +I G+A+ SE
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 176 ------------------GEKALRTFSEM--LREGFEPTHFSYSSVFTALASTGSLEQGK 215
++AL F E+ + G P + S +A A G+++ G+
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
W+H ++ K QL + +L+DMY+KSG +E A +VF+ + +DV W++M+ G A HG
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHG 557
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHY 334
G+A + F M + PN VTF +L ACSH+GL+DEG+ F M++ +GV P+ HY
Sbjct: 558 RGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHY 617
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
VD+LGRAG L+ ALKFI MP+ P+A+VWGALLGAC +H N+EL A R+ E++P
Sbjct: 618 SCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEP 677
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHP 454
+ G ++LL+N+YA G + R+ M++SG+KKE CS +E VH F+ D+AHP
Sbjct: 678 GNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHP 737
Query: 455 QRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFALISTPP 513
I+ K EI +++ GYV ++ +L + +++E +E L++HSEK+A+AF LI
Sbjct: 738 LSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADS 797
Query: 514 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+RVC DCH+ K SKV R+I++RD RFHHF G CSC DYW
Sbjct: 798 QQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 203/414 (49%), Gaps = 43/414 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNA--YAKCGCLDEARKLFDEMPVKDM 58
+CT K+LK+ +HA +L + +D + + A ++ LD ARK+FD++P ++
Sbjct: 148 QCTSFKQLKQ---IHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+W LI + + P ++++F +ML PN+FT ++KA A G+ VH
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAV-AERRCFLVGKAVH 263
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSE 175
+K + +V+V +SL+ YA +D A+ +F +E N+ VSWN+++ G +
Sbjct: 264 GMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGY 323
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+KAL F M EG P + SV +A A T +L G+ V ++ ++ + V N
Sbjct: 324 PDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNA 383
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA---QHGLGK-------------- 278
+DM+ K G +E A +F+ + KRDVVSW +++ G A +HG+ +
Sbjct: 384 TIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAW 443
Query: 279 -ATVRWFE---------------KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
+ +E ++ ++G P+QVT L L+AC+ G +D G+ +
Sbjct: 444 NVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYI 503
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
KK ++ + +D+ ++G +++A++ + VW A++ MH
Sbjct: 504 KKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMH 556
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I + + + ++++ Y+K G +++A ++F + KD+ W
Sbjct: 487 CAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVW 546
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+G + + + E AI LF M +KPN T +++L A D+ R
Sbjct: 547 SAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEKAL 180
YG S ++D+ R +++A + S W AL+ E A
Sbjct: 607 VYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAE 666
Query: 181 RTFSEMLREGFEP-THFSYSSVFTALASTGSLE 212
+ S +L EP H +Y + A TG E
Sbjct: 667 KACSRLLE--IEPGNHGAYVLLSNLYAKTGDWE 697
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/437 (45%), Positives = 292/437 (66%), Gaps = 1/437 (0%)
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
V ++L+DMYA+ D A+ +F + K+ +SW +L+ G E+ALR F EM G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P ++V +A A LE GK VHA+ +KSG V N+LV MYAK G IEDA
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
KVF+ + +DV++W +++ G AQ+G G+ ++ ++ M+ +G+ P+ +TF+ +L ACSHAG
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183
Query: 311 LLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
L++ G+ YF M++ +G++P HY +DLLGR+G L A + + +M ++P A VW AL
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
L ACR+H NVELG AA +FEL+P ++ P++LL+N+Y++AG+ +AA+ R++MK GV
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
KEP CSW+E + VH F++ D +HP+ A I+ K EI IK+ GYVPD + L D++
Sbjct: 304 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEE 363
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
+E L HSEKLA+AF L++ PPG+ I I KN+R+CGDCH+A K+ S V R +I+RD+
Sbjct: 364 GKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 423
Query: 550 NRFHHFRDGFCSCGDYW 566
N FHHFR+G CSC DYW
Sbjct: 424 NCFHHFREGACSCSDYW 440
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 171/313 (54%), Gaps = 22/313 (7%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ N +++ YAK G D A +F++M KD+++WT+L++G N E A+ LF +M +G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+ P+Q +++VL A A T +FG+QVHA LK G ++ V +SL+ MYA+ ++DA
Sbjct: 64 IHPDQIVIAAVLSAC-AELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F ++E ++ ++W ALI G+A+ G ++L +++M+ G +P ++ + A +
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 209 GSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVV 262
G +E G+ + IK G + A ++D+ +SG + +A+++ N++ ++ D
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYA----CMIDLLGRSGKLMEAKELLNQMAVQPDAT 238
Query: 263 SWNSMLTGCAQHG---LG-KATVRWFEKMLRNGIAP-NQVTFLCVLTACSHAGLLDEGQG 317
W ++L C HG LG +A FE + P N V ++ + S AG +E
Sbjct: 239 VWKALLAACRVHGNVELGERAANNLFE------LEPKNAVPYVLLSNLYSAAGKWEEAAK 292
Query: 318 YFALMKKHGVEPE 330
LMK GV E
Sbjct: 293 TRRLMKLRGVSKE 305
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 21/226 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + VHA+ L S + +++ N++++ YAKCGC+++A K+FD M ++D++TW
Sbjct: 78 CAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITW 137
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATD---DKFGRQVH 117
TALI GY+QN + ++ ++ M+ G+KP+ T +L A S AG + F
Sbjct: 138 TALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEE 197
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARK 173
+ +K G + + ++D+ R ++ +A L + + + + W AL+A H
Sbjct: 198 VYGIKPGPEHY----ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNV 253
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
GE+A E+ EP + + + L S GKW A
Sbjct: 254 ELGERAANNLFEL-----EPKNAVPYVLLSNLYSAA----GKWEEA 290
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/601 (37%), Positives = 337/601 (56%), Gaps = 40/601 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTIL----NAYAKCGCLDEARKLFDEMPVKD 57
C+ L LK I+HA+++ + D+ + ++ + + +D A ++F ++ +
Sbjct: 27 CSDLTHLK---IIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+ + A+I G+S + P+ A + Q R GL P+ T ++K S G Q H
Sbjct: 84 LFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVK-SCTKLHCISMGSQAH 142
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF--------------------------- 150
+K+G++ +VYV +SL+ MYA F + A
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202
Query: 151 ----LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
LF + KN V+W+ +I+G+A+ + +KA+ F + +G SV ++ A
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
G+LE G+ H +V+K+G L +G LVDMYA+ GSI+ A VF L +RD +SW +
Sbjct: 263 HLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTA 322
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-H 325
++ G A HG + ++++F M+ G+ P +TF VL+ACSH GL++ G F MK+ H
Sbjct: 323 LIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDH 382
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
VEP HY VDLLGRAG L+ A +F+ +MP++P A VWGALLGACR+HKN E+G
Sbjct: 383 RVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERV 442
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
+ + +L P SG ++LL+NIYA+A R+MMK G+KK P S +E VH
Sbjct: 443 GKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHK 502
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F D +HP+ I + W EI +I+ GY +++ L D++E+E+ L HSEKLA+A
Sbjct: 503 FTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIA 562
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F ++ + G+ I I KN+RVC DCH+A K SKV RE+IVRD NRFHHFR G CSC DY
Sbjct: 563 FGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDY 622
Query: 566 W 566
W
Sbjct: 623 W 623
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/559 (41%), Positives = 337/559 (60%), Gaps = 12/559 (2%)
Query: 11 ARIVHAHILGSAF-KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
+R++ AH L + D N +L+ Y + ++A+ FD MP KD +W +I+GY+
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
+ + E A LF M+ + N+ + ++++ SG D + H F K V
Sbjct: 167 RRGEMEKARELFYSMM----EKNEVSWNAMI--SGYIECGD-LEKASHFF--KVAPVRGV 217
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
++++ Y + +++ A +F + +KN V+WNA+I+G+ S E L+ F ML
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
EG P SS + +L+ G+ +H V KS +L+ MY K G + D
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 249 AEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
A K+F + K+DVV+WN+M++G AQHG + F +M+ N I P+ +TF+ VL AC+H
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 309 AGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
AGL++ G YF ++++ + VEP+ HY VDLLGRAG L+ ALK IR MP P AAV+G
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFG 457
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
LLGACR+HKNVEL +AAE++ +L+ ++ ++ LANIYAS R D AR RK MKES
Sbjct: 458 TLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD 487
V K P SW+E +N VH F ++D HP+ IHKK +E+ +K+K GY P+ L +
Sbjct: 518 VVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVE 577
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
++++E L HSEKLA+AF I P GS I + KN+R+CGDCH A KF S++ +REIIVR
Sbjct: 578 EEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVR 637
Query: 548 DTNRFHHFRDGFCSCGDYW 566
DT RFHHF+DG CSCGDYW
Sbjct: 638 DTTRFHHFKDGSCSCGDYW 656
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +H + S ND+ ++++ Y KCG L +A KLF+ M KD+V W
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
A+ISGY+Q+ + A+ LF +M+ ++P+ T +VL A
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 22/295 (7%)
Query: 140 ARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-KSEGEKALRTFSEMLREGFEPTHFSY 198
R +D A +F + +KN ++WN+L+ G ++ S +A + F E+ EP FSY
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSY 127
Query: 199 SSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
+ + + + E+ + + K NT++ YA+ G +E A ++F ++
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASW-----NTMITGYARRGEMEKARELFYSMM 182
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+++ VSWN+M++G + G + +F+ G+ V + ++T A ++ +
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAE- 237
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACR 374
A+ K V + + + LK R M I P ++ + L C
Sbjct: 238 --AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 375 MHKNVELGAYAAERIFELD-PHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
++LG + + + +D L ++Y G L DA + ++MK+ V
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/570 (39%), Positives = 349/570 (61%), Gaps = 7/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + +H + D+++ N +L YA+ C++E +K+F MP D V+W
Sbjct: 466 CASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSW 525
Query: 62 TALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+ I + ++ AI F +M++ G KPN+ T ++L A + + + GRQ+HA
Sbjct: 526 NSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLEL-GRQIHALI 584
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
LK+ + + ++LL Y + +QM+D +F+ + E ++EVSWNA+I+G+ KA
Sbjct: 585 LKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKA 644
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M+++G F+ ++V +A AS +LE+G VHA I++ + VG+ LVDM
Sbjct: 645 MGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDM 704
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G I+ A + F + R++ SWNSM++G A+HG G ++ F +M ++G P+ VTF
Sbjct: 705 YAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTF 764
Query: 300 LCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACSH GL+DEG +F M + + + P H+ VDLLGRAG + + +FI+ MP
Sbjct: 765 VGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMP 824
Query: 359 IEPTAAVWGALLGAC--RMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+ P A +W +LGAC +N ELG AA+ + EL+P ++ ++LL+N++A+ G+ D
Sbjct: 825 MNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDV 884
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
AR M+ + VKKE CSWV K+ VH+FVA D HP++ I+ K +EI K++ +GYV
Sbjct: 885 EEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYV 944
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P++ + L + + +E L HSEKLA+AF L + I I KN+RVCGDCH+AFK+
Sbjct: 945 PETKYALYDLELENKEELLSYHSEKLAIAFVL-TRQSELPIRIIKNLRVCGDCHTAFKYI 1003
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S +V R+II+RD+NRFHHF G CSC DYW
Sbjct: 1004 SNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 196/379 (51%), Gaps = 21/379 (5%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+++A +H I + +D+ NT++N + + G L A+KLFDEMP K++V+W+ L+SG
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYD 126
Y+QN P+ A +LF ++ GL PN + + S L+A G K G ++H K Y
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174
Query: 127 WNVYVGSSLLDMYARFD-QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
++ + + L+ MY+ +DDA +F ++ K SWN++I+ + R+ + A + FS
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234
Query: 186 MLREGFE----PTHFSYSSVFTALASTGS-----LEQGKWVHAHVIKSGGQLVAFVGNTL 236
M RE E P +++ S+ T S LEQ + A + KS +VG+ L
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQ---MLARIEKSSFVKDLYVGSAL 291
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V +A+ G I+ A+ +F ++ R+ V+ N ++ G A+ G+ + F++M ++ + N
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINA 350
Query: 297 VTFLCVLTACSHAGLLDEG-----QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
++ +L+A + L EG + + L++ V+ V+L + +D A
Sbjct: 351 SSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNAR 410
Query: 352 KFIREMPIEPTAAVWGALL 370
+ MP + T + W +++
Sbjct: 411 SIFQLMPSKDTVS-WNSII 428
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 189/360 (52%), Gaps = 6/360 (1%)
Query: 16 AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPE 75
A I S+F D+ + + +++ +A+ G +D A+ +F++M ++ VT L+ G ++ Q E
Sbjct: 274 ARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGE 333
Query: 76 NAIILFSQM---LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYV 131
A +F +M + + LS+ + S K G++VHA+ ++ D + +
Sbjct: 334 EAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRK-GQEVHAYLIRNALVDVWILI 392
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G++L+++YA+ + +D+A +F + SK+ VSWN++I+G E+A+ F M R G
Sbjct: 393 GNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGM 452
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P+ FS S ++ AS G + G+ +H IK G L V N L+ +YA++ +E+ +K
Sbjct: 453 VPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQK 512
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGK-ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF + + D VSWNS + A +++F +M++ G PN+VTF+ +L+A S
Sbjct: 513 VFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLS 572
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
LL+ G+ AL+ KH V + A T + G+ ++ M W A++
Sbjct: 573 LLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMI 632
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
F P + Y+ + ++E +H + K+G F NTLV+++ ++G++ A+
Sbjct: 39 FPPLNLDYNR----YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQ 94
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
K+F+ + ++++VSW+ +++G AQ+G+ F ++ G+ PN L AC G
Sbjct: 95 KLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
Query: 311 --LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR-AGLLDRALKFIREMPIEPTAAVWG 367
+L G L+ K + + + + +D A + E+ ++ T+A W
Sbjct: 155 PNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMK-TSASWN 213
Query: 368 ALLGA-CR 374
+++ CR
Sbjct: 214 SIISVYCR 221
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 340/597 (56%), Gaps = 33/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L+ + V + K++ + N +L+ Y KCG + R++FDE K++V +
Sbjct: 233 CAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMY 292
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++S Y Q+ +++ +ML+ G +P++ T+ S + A+ A D G+ HA+
Sbjct: 293 NTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTI-AACAQLGDLSVGKSSHAYVF 351
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + ++++DMY + + + A +F ++ +K V+WN+LIAG R E E ALR
Sbjct: 352 RNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALR 411
Query: 182 TFSEM---------------------------LRE----GFEPTHFSYSSVFTALASTGS 210
F EM LRE G + + + +A G+
Sbjct: 412 IFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGA 471
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L+ KW++ ++ K+ + +G LVDM+++ G +A +VF + KRDV +W + +
Sbjct: 472 LDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRV 531
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEP 329
A G K + F++ML+ + + F+ +LTA SH G +D+G Q ++A+ K HGV P
Sbjct: 532 KAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSP 591
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+ HY VDLLGRAGLL+ A ++ MPI+P +WG+ L ACR HKNVE YA E+I
Sbjct: 592 QIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKI 651
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
+L P G H+LL+NIYASAG+ ND AR R MKE G +K S +E + F +
Sbjct: 652 TQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSG 711
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D++H + A I +EI+ +I Q+GYVPD+++VL D+QE+E L HSEKLA+A+ LI
Sbjct: 712 DESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLI 771
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+T G I + KN+R+C DCHS K SK+ REI VRD NR+H F++GFCSC D+W
Sbjct: 772 NTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 201/421 (47%), Gaps = 37/421 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + E VH ++ D+ + N++++ YA CG +D RK+FDEM +++V+W
Sbjct: 132 CSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSW 191
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LI+GYS + + A+ LF +M+ +G++PN T+ + A A D + G++V
Sbjct: 192 TSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISAC-AKLKDLELGKKVCNLMT 250
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N V ++LLDMY + M +F KN V +N +++ + + + L
Sbjct: 251 ELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLV 310
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EML++G P + S A A G L GK HA+V ++G + + + N ++DMY
Sbjct: 311 VLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYM 370
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF----------------- 284
K G E A KVF+ + + VV+WNS++ G + G + +R F
Sbjct: 371 KCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGA 430
Query: 285 --------------EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
+M GI ++VT + + +AC + G LD + + ++K+ + +
Sbjct: 431 MVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHID 490
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
VD+ R G A++ M +A W A A R+ K VE A A +F
Sbjct: 491 MQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSA-WTA---AIRV-KAVEGNAKGAIELF 545
Query: 391 E 391
+
Sbjct: 546 D 546
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 212/466 (45%), Gaps = 28/466 (6%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC---LDEARKLF--DEMPVKDMVT 60
K L E + +H ++L K + N ++ A + G L+ A F DE + T
Sbjct: 33 KTLIELKQLHCNML----KKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYT 88
Query: 61 WTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
LI GY+ + + AI ++ M+ +G+ P+ FT +L A + G QVH
Sbjct: 89 CNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSE-GVQVHGV 147
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K G +++V +SL+ YA ++D +F + +N VSW +LI G++ + ++A
Sbjct: 148 VVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEA 207
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F EM+ G EP + +A A LE GK V + + G + V N L+DM
Sbjct: 208 VCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDM 267
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G + ++F+ +++V +N++++ QHGL + ++ML+ G P++VT
Sbjct: 268 YMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTM 327
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L + AC+ G L G+ A + ++G+E + +D+ + G + A K M
Sbjct: 328 LSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS- 386
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIF-ELDPHDSGPHILLANIYASAGRLNDAAR 418
T W +L+ +EL A RIF E+ + + A +A
Sbjct: 387 NKTVVTWNSLIAGLVRDGELEL----ALRIFGEMPESNLVSWNTMIGAMVQASMFEEAID 442
Query: 419 ARKMMKESGVKKE--------PACSW---VETKNAVHMFVANDDAH 453
+ M+ G+K + AC + ++ ++ ++ +D H
Sbjct: 443 LLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIH 488
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 335/573 (58%), Gaps = 10/573 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L ++ +H + S F+ + N ++ Y+KCG + A ++F++MP +++V+W
Sbjct: 115 CGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSW 174
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFC 120
A+I+G++ +++LF +M G P++FT +S LKA GA GA + G Q+HA
Sbjct: 175 NAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAI--RGGTQIHASL 232
Query: 121 LKYGYDWNV--YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G+ ++ + S+++D+YA+ + +A +F +E KN +SW+ALI G A++ +
Sbjct: 233 ITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLE 292
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ F ++ F S + A +EQGK +H +++K L V N+++D
Sbjct: 293 AMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIID 352
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K G E+AE++F+ + R+VVSW M+TG +HGLG+ + F +M +GI ++V
Sbjct: 353 MYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVA 412
Query: 299 FLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L +L+ACSH+GL+ E Q YF+ L H ++P HY VD+LGRAG L A I M
Sbjct: 413 YLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENM 472
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
++P +W LL ACR+H N+E+G E +F +D + +++++NIYA AG +
Sbjct: 473 KLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECE 532
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIGYV 476
R RK++K G+KKE SWVE +H F DD HP IH+ +E+ ++K ++GY
Sbjct: 533 RVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYA 592
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALIS---TPPGSTIHIKKNIRVCGDCHSAF 533
L +++ +E L+VHSEKLA+ AL+ G I + KN+RVCGDCH
Sbjct: 593 YGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFI 652
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK++++ +VRD NRFH F DG CSCGDYW
Sbjct: 653 KGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 202/363 (55%), Gaps = 12/363 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHA + F D+ M N +++ Y KC +D A +FD M +++V+WTAL+ GY Q
Sbjct: 26 VHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGN 85
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ ++ L +M G+KPN+FT S+ LKA GA G ++ G Q+H C+K G++W VG
Sbjct: 86 AKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVEN--GMQIHGMCVKSGFEWVSVVG 143
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++ +DMY++ ++ A +F + +N VSWNA+IAGH + G K+L F M +G
Sbjct: 144 NATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEV 203
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--FVGNTLVDMYAKSGSIEDAE 250
P F+++S A + G++ G +HA +I G + + + +VD+YAK G + +A+
Sbjct: 204 PDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQ 263
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHA 309
KVF+R+ +++++SW++++ G AQ G + F + LR ++ L ++ +
Sbjct: 264 KVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLF-RQLRESVSNVDGFVLSIMMGVFADL 322
Query: 310 GLLDEGQGY--FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
L+++G+ + L G++ A+ + +D+ + GL + A + EM + + W
Sbjct: 323 ALVEQGKQMHCYILKVPSGLDISVAN--SIIDMYLKCGLTEEAERLFSEMQVRNVVS-WT 379
Query: 368 ALL 370
++
Sbjct: 380 VMI 382
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 3/260 (1%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G QVHA + G+ +++ + + L+DMY + ++D A +F + +N VSW AL+ G+ +
Sbjct: 23 GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ + +L EM G +P F++S+ A + G +E G +H +KSG + V+ V
Sbjct: 83 EGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVV 142
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
GN +DMY+K G I AE+VFN++ R++VSWN+M+ G G G+ ++ F++M G
Sbjct: 143 GNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGE 202
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRA 350
P++ TF L AC G + G A + G + + VDL + G L A
Sbjct: 203 VPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEA 262
Query: 351 LKFIREMPIEPTAAVWGALL 370
K + + W AL+
Sbjct: 263 QKVFDRIE-QKNLISWSALI 281
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+ G +QG VHA + G + N L+DMY K ++ A VF+R+L+R+VVSW
Sbjct: 15 SKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWT 74
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+++ G Q G K ++ +M +G+ PN+ TF L AC G+++ G + K
Sbjct: 75 ALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKS 134
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G E +D+ + G + A + +MP + W A++
Sbjct: 135 GFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMI 178
>gi|224135801|ref|XP_002327307.1| predicted protein [Populus trichocarpa]
gi|222835677|gb|EEE74112.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/541 (41%), Positives = 331/541 (61%), Gaps = 26/541 (4%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
YAKCG LD AR++FDEM +++V+WTALISGY+Q+ + LFS ML + PN+F
Sbjct: 2 YAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDML-VDCYPNEFAF 60
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD------DAWF 150
+SV+ + D G+QVHA LK G +VYVG++L+ Y++ + + +A
Sbjct: 61 ASVIIS-----CDYVCGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACR 115
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F ++E +N VSWN++IA E+AL F ++ REG P ++S V A A +
Sbjct: 116 VFESMEFRNLVSWNSMIAAE------EEALLLFRQLYREGLAPDWCTFSIVLKACAGFVT 169
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
V++ V+K+G + + NTL+ YA+ GSI +++VF+++ RDVVSWNSM+
Sbjct: 170 ERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSWNSMIKA 229
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEP 329
A HG K + F +M + P+ T + +L+ACSHAGL++EG F M HGV P
Sbjct: 230 YALHGQAKEALHLFSEM---NVRPDSATMVALLSACSHAGLVEEGINIFDSMSMNHGVSP 286
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
+ HY VD+LGRAGLL A + I MP++P + VW ALL +CR + +L AA+++
Sbjct: 287 QLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLAADKL 346
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
EL+P +S ++ ++NIY S G N+A R M S V+KEP SW+E +N VH F +
Sbjct: 347 KELEPGNSLGYVQISNIYCSGGSYNEAGLIRDEMNGSRVRKEPGLSWIEIENRVHEFASG 406
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
HPQR I+ K + ++K +GYVP++S L +++ ++ +L HSEKLAL FAL+
Sbjct: 407 GRRHPQREAIYAKLYSLIGQLKGVGYVPETSLALQDIEEEHKQEQLYHHSEKLALVFALM 466
Query: 510 STPP----GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
S G I I KNIR+C DCH+ K AS ++++EI+VRD+NRFHHF++ CSC DY
Sbjct: 467 SEGSLCCGGGVIRIVKNIRICVDCHNFMKLASDLLQKEIVVRDSNRFHHFKNRMCSCNDY 526
Query: 566 W 566
W
Sbjct: 527 W 527
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 125/284 (44%), Gaps = 52/284 (18%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MYA+ +D A +F + +N VSW ALI+G+A+ + FS+ML + + P F+
Sbjct: 1 MYAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDMLVDCY-PNEFA 59
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS------GSIEDAEK 251
++SV + GK VHA +K G +VGN L+ Y+KS G +A +
Sbjct: 60 FASVIISCDYVC----GKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACR 115
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF + R++VSWNSM+ + + F ++ R G+AP+ TF VL AC AG
Sbjct: 116 VFESMEFRNLVSWNSMIAA------EEEALLLFRQLYREGLAPDWCTFSIVLKAC--AGF 167
Query: 312 LDE--GQGYFALMKKHGVEPEEAHYVTFVDLLGRAG-------LLDR------------- 349
+ E ++ + K G E + T + R G + D+
Sbjct: 168 VTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSWNSMI 227
Query: 350 -----------ALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
AL EM + P +A ALL AC VE G
Sbjct: 228 KAYALHGQAKEALHLFSEMNVRPDSATMVALLSACSHAGLVEEG 271
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 113/218 (51%), Gaps = 7/218 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + A V++ ++ + F++D + NT+++AYA+CG + ++++FD+M +D+V+W
Sbjct: 164 CAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSW 223
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y+ + Q + A+ LFS+M ++P+ T+ ++L A ++ + +
Sbjct: 224 NSMIKAYALHGQAKEALHLFSEM---NVRPDSATMVALLSACSHAGLVEEGINIFDSMSM 280
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
+G + + ++D+ R + +A L + + K + V W+AL++ + E + A
Sbjct: 281 NHGVSPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLA- 339
Query: 181 RTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWV 217
+ ++ L+E EP + Y + S GS + +
Sbjct: 340 KLAADKLKE-LEPGNSLGYVQISNIYCSGGSYNEAGLI 376
>gi|242078125|ref|XP_002443831.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
gi|241940181|gb|EES13326.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
Length = 688
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/561 (37%), Positives = 326/561 (58%), Gaps = 13/561 (2%)
Query: 17 HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
H+ S F D+ N +L Y +CG L EAR+ FD MP ++ VTW ++ G QP
Sbjct: 130 HVESSGFDLDLYTHNHVLRTYLECGMLAEARRAFDGMPDRNGVTWGIMMGGLVDRGQPRA 189
Query: 77 AIILFSQMLRL------GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV- 129
A+ LF +ML G P +L L+A+ A + + G+Q+H +K G +V
Sbjct: 190 ALALFREMLLAEEAGGDGDAPPPRSLVVALRAATASGSA-RAGQQLHCCVVKAGACGDVA 248
Query: 130 --YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
Y+ +LLDMY++ +D+A +F L + V+WN+++A + E+AL + EM
Sbjct: 249 DRYLACALLDMYSKCGLIDEARRVFDGLPRASVVAWNSMLAAYVLHGRSEEALELYQEMC 308
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSI 246
R F++S++ + G LE K HA +I+ G L VGNT LVD+Y K G +
Sbjct: 309 RSRVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPL-DIVGNTALVDLYCKWGRM 367
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
EDA VF R+ +R+++SWN+++ G HG+G + FE+++ G+ PN VTFL VL AC
Sbjct: 368 EDARNVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFERLIAEGVVPNHVTFLAVLNAC 427
Query: 307 SHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+GL+D+G+ F LM ++ ++P HY ++L GR GLLD A IR P PTA +
Sbjct: 428 RFSGLVDKGKRIFQLMTENLRMKPRAMHYACVIELFGREGLLDEAYSMIRRAPFTPTANM 487
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALL A R+HKN+ L AAE++ ++P + +L N+Y S+GR +DA + + +K
Sbjct: 488 WGALLTASRIHKNMHLAKLAAEQLLAMEPEKINSYAVLLNLYVSSGRQDDACKVVETLKR 547
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G+ AC+W+ K H F D HPQ A I+++ + + +++ GYV + + +L
Sbjct: 548 KGLYIHNACTWITVKKTDHKFFFKDTLHPQSAEIYRRLHTLMKDVREAGYVAEENELLPD 607
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
E++ HSE+LA+AF L+ST P + + I ++ R+C DCH KF ++V +REI+
Sbjct: 608 IYPDEQKVSSAYHSERLAIAFGLMSTAPQTPLRINQSHRLCRDCHKVIKFVAEVTKREIV 667
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRD +RFHHF+ G CSCGDYW
Sbjct: 668 VRDGSRFHHFKLGICSCGDYW 688
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 35/264 (13%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
+ L L+ A+ HA ++ DI +++ Y K G +++AR +F+ MP +++++W
Sbjct: 327 SRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGRMEDARNVFERMPRRNLISWN 386
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
ALI+GY + + AI +F +++ G+ PN T +VL A DK R
Sbjct: 387 ALIAGYGYHGMGDKAIEMFERLIAEGVVPNHVTFLAVLNACRFSGLVDKGKRIFQLMTEN 446
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+ +++++ R +D+A
Sbjct: 447 LRMKPRAMHYACVIELFGREGLLDEA---------------------------------- 472
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+S + R F PT + ++ TA ++ K ++ + + L+++Y
Sbjct: 473 YSMIRRAPFTPTANMWGALLTASRIHKNMHLAKLAAEQLLAMEPEKINSYA-VLLNLYVS 531
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNS 266
SG +DA KV L ++ + N+
Sbjct: 532 SGRQDDACKVVETLKRKGLYIHNA 555
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/568 (39%), Positives = 318/568 (55%), Gaps = 42/568 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ + +H I+ + + ++N + + YAKCG +D+AR LFD M K++V+W
Sbjct: 165 CSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSW 224
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ISGY + P I LF++M GLKP+ T+S+VL A
Sbjct: 225 NLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA------------------- 265
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
Y R ++DDA LF L K+E+ W +I G+A+ E A
Sbjct: 266 -----------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWM 308
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +MLR +P ++ SS+ ++ A SL G+ VH V+ G V + LVDMY
Sbjct: 309 LFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYC 368
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G DA +F + R+V++WN+M+ G AQ+G + +E+M + P+ +TF+
Sbjct: 369 KCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVG 428
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL+AC +A ++ EGQ YF + +HG+ P HY + LLGR+G +D+A+ I+ MP EP
Sbjct: 429 VLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEP 488
Query: 362 TAAVWGALLGACRMH--KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+W LL C KN EL AA +FELDP ++GP+I+L+N+YA+ GR D A
Sbjct: 489 NYRIWSTLLSVCAKGDLKNAEL---AASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVV 545
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R +MKE KK A SWVE N VH FV+ D HP+ I+ + + ++QIGY PD+
Sbjct: 546 RSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDT 605
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPG-STIHIKKNIRVCGDCHSAFKFASK 538
+ VL ++E+ + HSEKLALAFALI P G + I I KNIRVC DCH KFAS
Sbjct: 606 NIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASI 665
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ R II+RD+NRFHHF G CSC D W
Sbjct: 666 TISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 167/364 (45%), Gaps = 41/364 (11%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
KL +A+ ++ + K D+ NT+L+AYAK G ++ +FD+MP +D V++ LI+
Sbjct: 73 KLSDAQ----NVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIA 128
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
++ N A+ + +M G +P Q++ + L+A + D + G+Q+H +
Sbjct: 129 CFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQAC-SQLLDLRHGKQIHGRIVVADLG 187
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
N +V +++ DMYA+ +D A LF + KN VSWN +I+G+ + + + F+EM
Sbjct: 188 ENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEM 247
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G +P + S+V A Y + G +
Sbjct: 248 QLSGLKPDLVTVSNVLNA-----------------------------------YFRCGRV 272
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+DA +F +L K+D + W +M+ G AQ+G + F MLR + P+ T ++++C
Sbjct: 273 DDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSC 332
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L GQ + G++ VD+ + G+ A MPI W
Sbjct: 333 AKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVITW 391
Query: 367 GALL 370
A++
Sbjct: 392 NAMI 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM-L 288
+F+ N L+ +YAK G + DA+ VF+ + KRDV SWN++L+ A+ G+ + F++M
Sbjct: 58 SFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPY 117
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
R+ ++ N T + + H+G + M++ G +P + +V
Sbjct: 118 RDSVSYN--TLIACFASNGHSG---KALKVLVRMQEDGFQPTQYSHVN 160
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 325/563 (57%), Gaps = 40/563 (7%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
LD + ++FD + + W ++ Y Q++ E A++L+ M++ + P+ +T V++A
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA----------RFD--------- 143
+ G+++H LK G+D +VYV ++L++MYA FD
Sbjct: 139 CAVRLLEFG-GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197
Query: 144 ---------------QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
Q+ +AW LF ++ K+ VSW+ALI+G+ + E+AL F EM
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV----DMYAKSG 244
G SV +A A ++ GK +H VI+ G + + N L+ DMY K G
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCG 317
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
+E+A +VFN + ++ V SWN+++ G A +GL + ++ F +M NG+ PN++TF+ VL
Sbjct: 318 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLG 377
Query: 305 ACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC H GL+DEG+ +FA +++KHG+EP HY VDLLGRAGLL+ A K I MP+ P
Sbjct: 378 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 437
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
A WGALLGAC+ H + E+G ++ EL P G H+LL+NI+AS G D R MM
Sbjct: 438 ATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMM 497
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
K+ GV K P CS +E VH F+A D HP + E+++++K GY PD++ V
Sbjct: 498 KQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVS 557
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
D++E+E L HSEKLA+AF L++ P + I I KN+R+C DCH+A K SK RE
Sbjct: 558 LDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYARE 617
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
I+VRD +RFH+F++G CSC DYW
Sbjct: 618 IVVRDRHRFHYFKEGACSCMDYW 640
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 177/356 (49%), Gaps = 46/356 (12%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV------------------ 55
+H H+L F +D+ +QNT++N YA CG + +ARKLFDE PV
Sbjct: 151 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 210
Query: 56 ----------------KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV 99
KDMV+W+ALISGY QN E A+++F +M G++ ++ + SV
Sbjct: 211 MGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 270
Query: 100 LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL----DMYARFDQMDDAWFLFTAL 155
L A A + K G+ +H ++ G + V + ++L+ DMY + +++A +F +
Sbjct: 271 LSAC-AHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGM 329
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
E K SWNALI G A E++L FSEM G P ++ V A G +++G+
Sbjct: 330 EEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGR 389
Query: 216 WVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCA 272
A +I+ G V G +VD+ ++G + +AEK+ + + DV +W ++L C
Sbjct: 390 CHFASMIEKHGIEPNVKHYG-CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACK 448
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGV 327
+HG + R K++ + P+ F +L+ + G ++ +MK+ GV
Sbjct: 449 KHGDTEMGERVGRKLIE--LQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGV 502
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 140/300 (46%), Gaps = 42/300 (14%)
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMY--ARFDQMDDAWFLFTALESKNEVSWNALIA 168
+F R + L G+ + + S LL + F +D + +F +E+ N WN ++
Sbjct: 44 QFNRILSQMILT-GFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMR 102
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ + + EKAL + M++ P +++Y V A A GK +H HV+K G
Sbjct: 103 AYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDS 162
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVF----------------------------------N 254
+V NTL++MYA G++ DA K+F N
Sbjct: 163 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFN 222
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ ++D+VSW+++++G Q+G+ + + F +M NG+ ++V + VL+AC+H ++
Sbjct: 223 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT 282
Query: 315 GQGYFALMKKHGVEP----EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
G+ L+ + G+E + A + D+ + G ++ AL+ M E + W AL+
Sbjct: 283 GKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGME-EKGVSSWNALI 341
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 20/274 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA----KCGCLDEARKLFDEMPVKD 57
C HL +K +++H ++ ++ + +QN +++ Y+ KCGC++ A ++F+ M K
Sbjct: 274 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKG 333
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
+ +W ALI G + N E ++ +FS+M G+ PN+ T VL A D+
Sbjct: 334 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 393
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG---HARK 173
+ K+G + NV ++D+ R +++A L ++ +V +W AL+ H
Sbjct: 394 SMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDT 453
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE-----QGKWVHAHVIKSGGQL 228
GE+ R E L+ + H S++F AS G E +G V+K+ G
Sbjct: 454 EMGERVGRKLIE-LQPDHDGFHVLLSNIF---ASKGDWEDVLEVRGMMKQQGVVKTPGCS 509
Query: 229 VAFVGNTLVDMYAKSGS---IEDAEKVFNRLLKR 259
+ + + A + I E + N + KR
Sbjct: 510 LIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKR 543
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/600 (39%), Positives = 332/600 (55%), Gaps = 40/600 (6%)
Query: 3 THLKKLKEARIVHAHILGSAF--KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
T + A +HA +L + D A+ + AYA G LD + L +
Sbjct: 297 TSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIF 356
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+T+ I +S A+ L S ML GL P TLS+ L A + GR +H +
Sbjct: 357 YTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSP----GRALHGYA 412
Query: 121 LKYGYDWNVYVGSSLLDMYAR----------FDQM----------------------DDA 148
K + YV ++LL MYAR FD M DDA
Sbjct: 413 FKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDA 472
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
LF L +K+ V WNA+I G+ + +ALR F ML G EP + V +A+A
Sbjct: 473 RSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQL 532
Query: 209 GSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G++E GKW+H++V S QL VG L+DMY K GS+ DA VF+ + +D+V WN+M
Sbjct: 533 GTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAM 592
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
+ G A HG + + F + G+ P +TF+ +L ACSH+G+++EG+ +F M++ +G
Sbjct: 593 INGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYG 652
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
++P+ HY VDLLGRAGL+ A ++ M I P A +W +LL ACR+HKN+ LG A
Sbjct: 653 IDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIA 712
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+ + +SG +ILL+NIYA+ G + AR R MMK SG++KEP CS +E V+ F
Sbjct: 713 DYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEF 772
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
VA D +HP+ I+ +++ +K+ G+VP + VL D+ +E L VHSEKLALAF
Sbjct: 773 VAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAF 832
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
LIST PG+TI I KN+R C DCH+ K S++ R+I+ RD NRFHHF DG CSCGDYW
Sbjct: 833 GLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 317/543 (58%), Gaps = 10/543 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D NT+L+ + CG +D A ++F MPV+D+ +W ++SG S+N E A +F M
Sbjct: 71 DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+++ + GA ++ F + + ++++ Y +
Sbjct: 131 ARNAVSWNAMVAARASSGDMGAAENLFRNAPEKT--------DAILWTAMVSGYMDTGNV 182
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTA 204
A F A+ +N VSWNA++AG+ + S ALR F M+ + +P + SSV
Sbjct: 183 QKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLG 242
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
++ +L G+ VH +K VG +L+ MY K G ++DA K+F+ + +D+V+W
Sbjct: 243 CSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAW 302
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
N+M++G AQHG G+ ++ FEKM G+ P+ +T L VLTAC H GL D G F M++
Sbjct: 303 NAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQE 362
Query: 325 -HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ +EP+ HY VDLL RAGLL+RA+ I MP EP + +G LL ACR++KN+E
Sbjct: 363 AYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAE 422
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AA ++ E DP ++G ++ LANIYA A R +D +R R+ MK++ V K P SW+E K
Sbjct: 423 FAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVR 482
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F +ND HPQ +IH K + + +K +GY PD L ++ + L HSEKLA
Sbjct: 483 HEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLA 542
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LIST PG T+ I KN+R+CGDCH+A K SK+ +REII+RDT RFHHFR G CSCG
Sbjct: 543 IAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCG 602
Query: 564 DYW 566
DYW
Sbjct: 603 DYW 605
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 139/252 (55%), Gaps = 6/252 (2%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
K D + +++ Y G + +A + F MPV+++V+W A+++GY +N + +A+ +F
Sbjct: 163 KTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKT 222
Query: 84 MLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
M+ + +PN TLSSVL + + FGRQVH +C+K ++ VG+SLL MY +
Sbjct: 223 MVEDAIVQPNPSTLSSVLLGC-SNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKC 281
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+DDA LF + +K+ V+WNA+I+G+A+ G KA++ F +M EG P + +V
Sbjct: 282 GDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVL 341
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDMYAKSGSIEDAEKVFNRL-LKR 259
TA TG + G ++ + V + +VD+ ++G +E A + + + +
Sbjct: 342 TACIHTGLCDFGIQCF-ETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEP 400
Query: 260 DVVSWNSMLTGC 271
++ ++LT C
Sbjct: 401 HPSAYGTLLTAC 412
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 40/263 (15%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L L R VH + I + ++L+ Y KCG LD+A KLFDEM KD+V W
Sbjct: 243 CSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAW 302
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ AI LF +M G+ P+ TL +VL A C+
Sbjct: 303 NAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTA-----------------CI 345
Query: 122 KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G D+ + ++ + Y Q+D ++ ++ R E+A+
Sbjct: 346 HTGLCDFGIQCFETMQEAYNIEPQVD---------------HYSCMVDLLCRAGLLERAV 390
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDM 239
M FEP +Y ++ TA +LE ++ +I+ Q A+V L ++
Sbjct: 391 NMIHSM---PFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYV--QLANI 445
Query: 240 YAKSGSIEDAEKVFNRLLKRDVV 262
YA + +D +V R +K + V
Sbjct: 446 YAVANRWDDVSRV-RRWMKDNAV 467
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 328/544 (60%), Gaps = 13/544 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ +L+ Y + G + EAR LFDEMP +++V+WTA+ISGY+QN + A LF M
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP 232
Query: 86 RLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
+ N+ + +++L AG +D A + V ++++ + +
Sbjct: 233 ----ERNEVSWTAMLVGYIQAGHVEDA------AELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D A +F + +++ +W+A+I + + +AL TF EML G P + S S+ T
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+ L+ G+ VHA +++ + F + L+ MY K G+++ A++VF+ +D+V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK- 323
NSM+TG AQHGLG+ + F M G++P+ +T++ LTACS+ G + EG+ F M
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ P HY VDLLGR+GL++ A I+ MP+EP A +WGAL+GACRMH+N E+
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAE 522
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AA+++ EL+P ++GP++LL++IY S GR DA++ RK + + K P CSW+E V
Sbjct: 523 FAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV 582
Query: 444 HMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
H+F + D AHP+ A I + ++ + + GY D S VL D++++ L+ HSE+
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQ 642
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+A+ L+ P G I + KN+RVCGDCHSA K +K+ REII+RD NRFHHF+DGFCSC
Sbjct: 643 AVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSC 702
Query: 563 GDYW 566
DYW
Sbjct: 703 RDYW 706
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 146/261 (55%), Gaps = 3/261 (1%)
Query: 16 AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPE 75
A + + ++ +A N ++ + + G +D A+ +F++M +D TW+A+I Y QN+
Sbjct: 256 AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLM 315
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSL 135
A+ F +ML G++PN ++ S+L A A D +GR+VHA L+ +D +V+ S+L
Sbjct: 316 EALSTFREMLWRGVRPNYPSVISILTVCAALAVLD-YGREVHAAMLRCSFDMDVFAVSAL 374
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
+ MY + +D A +F E K+ V WN++I G+A+ GE+AL F +M G P
Sbjct: 375 ITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 196 FSYSSVFTALASTGSLEQGKWV-HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA-EKVF 253
+Y TA + TG +++G+ + ++ + S + A + +VD+ +SG +E+A + +
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 254 NRLLKRDVVSWNSMLTGCAQH 274
N ++ D V W +++ C H
Sbjct: 495 NMPVEPDAVIWGALMGACRMH 515
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 67/341 (19%)
Query: 38 AKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLS 97
A+ G ++ AR F+ MP++ ++ AL++GY +N P+ A+ LF +M L +S
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87
Query: 98 SV------LKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFL 151
+ L + A F V +F +SLL Y R + DA L
Sbjct: 88 GLSLRRQTLPDAAAALASIPFPPSVVSF-------------TSLLRGYVRHGLLADAIRL 134
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + +N VS+ L+ G +A R F EM P
Sbjct: 135 FQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDR---------------- 172
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+VA+ ++ Y ++G I +A +F+ + KR+VVSW +M++G
Sbjct: 173 ---------------DVVAW--TAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
AQ+G + FE M N+V++ +L AG +++ F M +H V
Sbjct: 216 AQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACN 271
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
A V F G+ G++D A K + E E W A++ A
Sbjct: 272 AMMVGF----GQRGMVD-AAKTVFEKMCERDDGTWSAMIKA 307
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VHA +L +F D+ + ++ Y KCG LD+A+++F KD+V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV-HAF 119
++I+GY+Q+ E A+ +F M G+ P+ T L A S G K GR++ ++
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV--KEGREIFNSM 460
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALI 167
+ S ++D+ R +++A+ L + + V W AL+
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 47/226 (20%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N + A++G+IE A F + R S+N++L G ++ L A + F +M +A
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 294 -----------------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
P+ V+F +L GLL + F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 325 HGVEPEEAHYVTFVDLLG---RAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVE 380
PE H V++ LLG AG ++ A + EMP A W A+L G C+ + E
Sbjct: 139 ----PERNH-VSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVA-WTAMLSGYCQAGRITE 192
Query: 381 LGAYAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
A +F E+ + + + YA G +N A + ++M E
Sbjct: 193 -----ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPE 233
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/592 (39%), Positives = 332/592 (56%), Gaps = 44/592 (7%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA +L + + + +YA G L + LF P ++ WT +I+ ++ D
Sbjct: 42 IHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDL 101
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A+ +SQML ++PN FTLSS+LKA R VH+ +K+G ++YV +
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHP-----ARAVHSHAIKFGLSSHLYVST 156
Query: 134 SLLDMYAR----------FDQM---------------------DDAWFLFTALESKNEVS 162
L+D YAR FD M +A LF + K+ V
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVC 216
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREG-------FEPTHFSYSSVFTALASTGSLEQGK 215
WN +I G+A+ +AL F +M+ P + +V ++ G+LE GK
Sbjct: 217 WNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGK 276
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
WVH++V +G ++ VG LVDMY K GS+EDA KVF+ + +DVV+WNSM+ G HG
Sbjct: 277 WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHG 336
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHY 334
++ F +M G+ P+ +TF+ VLTAC+HAGL+ +G F MK +G+EP+ HY
Sbjct: 337 FSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHY 396
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
V+LLGRAG + A +R M +EP +WG LL ACR+H NV LG AE +
Sbjct: 397 GCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGL 456
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHP 454
SG ++LL+N+YA+A A+ R MMK SGV+KEP CS +E KN VH FVA D HP
Sbjct: 457 ASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHP 516
Query: 455 QRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPG 514
+ I+ +++ +K+ Y P + VL +QE+E L+VHSEKLALAF LIST PG
Sbjct: 517 RSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPG 576
Query: 515 STIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ I I KN+RVC DCH+ K SK+ R+II+RD NRFHHF +G CSC DYW
Sbjct: 577 AAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 165/335 (49%), Gaps = 45/335 (13%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP------------- 54
L AR VH+H + + + + +++AYA+ G + A+KLFD MP
Sbjct: 133 LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTC 192
Query: 55 ------------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-------L 89
+KD+V W +I GY+Q+ P A++ F +M+ + +
Sbjct: 193 YAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKV 252
Query: 90 KPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+PN+ T+ +VL + G GA + G+ VH++ G NV VG++L+DMY + ++DA
Sbjct: 253 RPNEITVVAVLSSCGQVGALE--CGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDA 310
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F +E K+ V+WN++I G+ ++AL+ F EM G +P+ ++ +V TA A
Sbjct: 311 RKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHA 370
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWN 265
G + +G W +K G + V + +V++ ++G +++A + + ++ D V W
Sbjct: 371 GLVSKG-WEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWG 429
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
++L C H E ++ NG+A + L
Sbjct: 430 TLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVL 464
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 43/300 (14%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA L+ G + + L YA + + LF + N W +I HA
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
AL +S+ML +P F+ SS+ A +L + VH+H IK G +V
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVST 156
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKR-------------------------------DVVS 263
LVD YA+ G + A+K+F+ + +R DVV
Sbjct: 157 GLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVC 216
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNG-------IAPNQVTFLCVLTACSHAGLLDEGQ 316
WN M+ G AQHG + +F KM+ + PN++T + VL++C G L+ G+
Sbjct: 217 WNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGK 276
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ ++ +G++ VD+ + G L+ A K M + A W +++ +H
Sbjct: 277 WVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVA-WNSMIMGYGIH 335
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VH+++ + K ++ + +++ Y KCG L++ARK+FD M KD+V W
Sbjct: 266 CGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAW 325
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY + + A+ LF +M +G+KP+ T +VL A K +
Sbjct: 326 NSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKD 385
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
YG + V ++++ R +M +A+ L ++E + + V W L+ H+ S GE
Sbjct: 386 GYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGE 445
Query: 178 K 178
+
Sbjct: 446 E 446
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/561 (38%), Positives = 335/561 (59%), Gaps = 6/561 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
RI+HAH++ S D + + +++ Y K G +A LFDEMP KD V+W +L+SG ++
Sbjct: 64 CRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAK 123
Query: 71 NDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
Q + +F +M LK N+FT SV+ A + D+ G VH +K G + V
Sbjct: 124 IGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE-GYYVHCCAMKLGLVYEV 182
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V ++L++MY +F ++ A+ LF+ + K+ VSWN+++A A+ +A F M
Sbjct: 183 KVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMR 242
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
GF P + S+ A + + +H + G + TL+++Y+K G +
Sbjct: 243 VNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLN 302
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCVLTAC 306
++ KVF + K D V+W +ML G A HG GK + +FE+++R G+ P+ VTF +L+AC
Sbjct: 303 NSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSAC 362
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+ EG+ +F +M + V+P HY VDLLGR GLLD A + I+ MP EP + V
Sbjct: 363 SHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGV 422
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGACR+H+N++LG AA+ + LDP D +I+L+N+Y++AG NDA++ R +MK
Sbjct: 423 WGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKN 482
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
+ + CS++E N +H FV +D HP IHKK E+ +KI+ +G+V ++ +L
Sbjct: 483 KVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHD 542
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
D++ + + HSEK+ALA+ L+ T + I KN+R+C DCH+ KF S V +R II
Sbjct: 543 VDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTII 602
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RDT RFH F G CSCGDYW
Sbjct: 603 IRDTKRFHQFSGGLCSCGDYW 623
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 152/294 (51%), Gaps = 19/294 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMV 59
C K E VH + ++ + N ++N Y K G ++ A +LF EMP K +V
Sbjct: 157 CVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIV 216
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV--- 116
+W ++++ +QN P A F M G P+ T+ S+L+A + GR V
Sbjct: 217 SWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQA----CENFPLGRMVEVL 272
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H G D N+ + ++LL++Y++ +++++ +F + ++V+W A++AG+A G
Sbjct: 273 HGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCG 332
Query: 177 EKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKW---VHAHVIKSGGQLVAFV 232
++A+ F ++R EG EP H +++ + +A + +G +++GK+ V + V K +L +
Sbjct: 333 KEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHY- 391
Query: 233 GNTLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH---GLGKATVR 282
+ +VD+ + G ++DA E + N + + W ++L C H LGK +
Sbjct: 392 -SCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAK 444
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F+ + F+P S++ L S+ S+ + +HAHVIKS F+G+ LV Y K
Sbjct: 36 FNAISTHHFDPF---LSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLK 92
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLC 301
G +DA +F+ + K+D VSWNS+++G A+ G + F KM + + N+ TFL
Sbjct: 93 MGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLS 152
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP-IE 360
V++AC DEG K G+ E V++ G+ G ++ A + EMP E
Sbjct: 153 VISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESE 212
Query: 361 PTAAVWGALLGAC 373
+ W +++ C
Sbjct: 213 KSIVSWNSIVAVC 225
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/597 (38%), Positives = 347/597 (58%), Gaps = 51/597 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNT-----ILNAYAKCGCLDEARKLFDEMPVK 56
C+HL+ L + +HA +L ND+ ++N+ +++ Y C ++ R +FD M +
Sbjct: 297 CSHLEMLGCGKEIHAFVL---MNNDL-IENSFVGCALVDMYCNCKQPEKGRLVFDGMFRR 352
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQML-RLGLKPNQFTLSSVLKAS-GAGATDDKFGR 114
+ W A+I+GY +N+ AI LF +M+ LGL PN TLSSVL A + DK G
Sbjct: 353 TIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG- 411
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+H+ +K+G++ + YV ++L+DMY+R +++ A +F ++ K+ VSWN +I G+
Sbjct: 412 -IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCG 470
Query: 175 EGEKALRTFSEMLREGFE------------------PTHFSYSSVFTALASTGSLEQGKW 216
+ AL +M R E P + +V A+ +L +GK
Sbjct: 471 RHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE 530
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+HA+ +K VG+ LVDMYAK G + + VF ++ R+V++WN ++ HG
Sbjct: 531 IHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGK 590
Query: 277 GKATVRWFEKMLRNG-----IAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPE 330
G+ ++ F +M+ G I PN+VT++ + + SH+G++DEG F MK KHG+EP
Sbjct: 591 GEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPT 650
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIE-PTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VDLLGR+G ++ A I+ MP W +LLGAC++H+N+E+G AA+ +
Sbjct: 651 SDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNL 710
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
F LDP N+ + + R MKE GV+KEP CSW+E + VH F+A
Sbjct: 711 FVLDP----------NVLDYGTKQSMLGRK---MKEKGVRKEPGCSWIEHGDEVHKFLAG 757
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D +HPQ +H+ +S ++K+ GYVPD+S VL ++E+E L HSE+LA+AF L+
Sbjct: 758 DVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLL 817
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+T PG+TI + KN+RVC DCH A KF SK+V+REII+RD RFHHFR+G CSCGDYW
Sbjct: 818 NTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 181/355 (50%), Gaps = 3/355 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
++ L + +HAH+ A+ N+++N Y KCG +D AR++FDE+ +D V+W ++
Sbjct: 98 IQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSM 157
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+ + ++ E A+ LF ML + P FTL SV A G+QVHAF L+ G
Sbjct: 158 INAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG 217
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
DW + ++L+ MYA+ ++ +A LF + K+ VSWN +I+ ++ E+AL
Sbjct: 218 -DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLH 276
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV-AFVGNTLVDMYAKS 243
ML+ G P + +SV A + L GK +HA V+ + + +FVG LVDMY
Sbjct: 277 VMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNC 336
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCV 302
E VF+ + +R + WN+M+ G ++ + F +M+ G++PN VT V
Sbjct: 337 KQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSV 396
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L AC + +G + + K G E ++ +D+ R G ++ A M
Sbjct: 397 LPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM 451
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 172/337 (51%), Gaps = 9/337 (2%)
Query: 61 WTALISGYSQNDQP-ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W + + +Q+ AI ++ M+ G+ P+ F +VLKA+ AG D G+Q+HA
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKAT-AGIQDLNLGKQLHAH 110
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
K+G V +SL++MY + +D A +F + ++++VSWN++I R E E A
Sbjct: 111 VFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELA 170
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ F ML E PT F+ SV A ++ L GK VHA V+++ G F N LV
Sbjct: 171 VHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRN-GDWRTFTNNALVT 229
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G + +A+ +F+ +D+VSWN++++ +Q+ + + + ML++G+ PN VT
Sbjct: 230 MYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVT 289
Query: 299 FLCVLTACSHAGLLDEGQGY--FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
VL ACSH +L G+ F LM +E VD+ ++ + + +
Sbjct: 290 LASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVG-CALVDMYCNCKQPEKG-RLVFD 347
Query: 357 MPIEPTAAVWGALL-GACRMHKNVELGAYAAERIFEL 392
T AVW A++ G R + E E +FEL
Sbjct: 348 GMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFEL 384
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 345/634 (54%), Gaps = 70/634 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP------- 54
C L L+ + +H L S D + +++L+ Y + L +AR +FD++P
Sbjct: 84 CAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTS 143
Query: 55 ------------VKD----------------MVTWTALISGYSQNDQPENAIILFSQMLR 86
VK+ +V+W +ISG++++ +A+++F M
Sbjct: 144 SALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHL 203
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----- 141
GLKP+ ++SSVL A G G Q+H + +K G + +V S+L+DMY +
Sbjct: 204 EGLKPDGTSVSSVLPAVG-DLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACAS 262
Query: 142 -----FDQMDDAWF-----LFTALESK------------------NEVSWNALIAGHARK 173
F++MD+ L T L N VSW ++IA ++
Sbjct: 263 EMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQN 322
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ +AL F EM EG +P + + A + +L GK H +++G +VG
Sbjct: 323 GKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVG 382
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ L+DMYAK G + + F+ + R++VSWNS++ G A HG + FE M R G
Sbjct: 383 SALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQK 442
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+ V+F CVL+AC+ GL +EG YF ++ + HGVE HY V LLGR+G L+ A
Sbjct: 443 PDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYA 502
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
I++MP EP + VWGALL +CR+H V+LG AA+R+FEL+P + G +ILL+NIYAS
Sbjct: 503 MIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAM 562
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
+ R MM+ G+KK P SW+E KN VHM +A D +HPQ I +K +++ ++K+
Sbjct: 563 WVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKK 622
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
GYVP + VL ++Q++E L HSEKLA+ L++T PG + + KN+R+C DCH+
Sbjct: 623 SGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAV 682
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KF S +REI VRDTNRFH F+ G CSCGDYW
Sbjct: 683 IKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 162/406 (39%), Gaps = 74/406 (18%)
Query: 55 VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR 114
+K ++ I +S+ + + I +FS ML G+ P+ L +V+K A + + G+
Sbjct: 36 LKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAA-LSALQTGK 94
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL------------------- 155
Q+H F L G + V SSLL MY +FD + DA +F L
Sbjct: 95 QMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKG 154
Query: 156 ---ESK-------------NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
E+K N VSWN +I+G R A+ F M EG +P S S
Sbjct: 155 RVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVS 214
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--- 256
SV A+ G +H +VIK G FV + L+DMY K + VFN +
Sbjct: 215 SVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEV 274
Query: 257 ------------------------------LKRDVVSWNSMLTGCAQHGLGKATVRWFEK 286
+ +VVSW SM+ C+Q+G + F +
Sbjct: 275 DVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFRE 334
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
M G+ PN VT C+L AC + L G+ ++G+ + +D+ + G
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGR 394
Query: 347 LDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFEL 392
+ A + +M W +L+ MH + A IFEL
Sbjct: 395 M-LASRLCFDMMPNRNLVSWNSLMAGYAMHGK----TFEAINIFEL 435
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/570 (37%), Positives = 338/570 (59%), Gaps = 9/570 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + KE + VHAH + + + + + ++ Y KC L +AR + +EMP +++V+
Sbjct: 35 ECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCDSLGDARHVLNEMPERNVVS 94
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSV--LKASGAGATDDKFGRQVHA 118
WTA+IS YSQ A+ + Q+LR G + N+FT +++ G +H+
Sbjct: 95 WTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYFMYRFLGFC---LREAIHS 151
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K + +VYVGSSLLDMYA+ ++ +A +F L ++ VS A+I+G+A+ E+
Sbjct: 152 LIIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLDLDEE 211
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L F + REG + +Y+SV TAL+ +L+ GK VH H++ S + N+L+D
Sbjct: 212 -LELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQVHNHLLCSEVPSFVILQNSLID 270
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQV 297
MY+K G++ A ++F+ + +R V+SWN+ML G ++HG + + F M N + P+ V
Sbjct: 271 MYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKHGERREVLELFNLMRDENKVKPDSV 330
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMK--KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
T L VL+ CSH G D+G F M K V+P+ Y VDLLGRAG ++ A +FI+
Sbjct: 331 TVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDTKRYGCVVDLLGRAGRVEEAFEFIK 390
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
++P EP+AA+ G LLGAC +H N+ +G + R+ E +P ++G +++L+N+YASAGR D
Sbjct: 391 KIPFEPSAAICGCLLGACSVHSNLGIGEFVGHRLLEFEPENAGNYVILSNLYASAGRWED 450
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
R +M + V KEP S +E + F +D +HP+R + K +E+ + K+ GY
Sbjct: 451 VTSLRNLMLKKAVTKEPGRSLIEVDQVLQTFHPSDCSHPRREEVSAKXQELLVRFKEAGY 510
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
PD S VL D++++E L HSEKLAL+F LI+TP I + KN+R+C DCH+ K+
Sbjct: 511 FPDLSCVLHDVDEEQKEKILLSHSEKLALSFGLIATPESVLICVIKNLRICVDCHNFAKY 570
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
SK+ RE+ +RD N FH CSCGDY
Sbjct: 571 ISKIYSREVSLRDKNWFHGIVGEKCSCGDY 600
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M G + Y++V S + ++G+ VHAH IK+ ++ L+ Y K
Sbjct: 16 QMTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCD 75
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
S+ DA V N + +R+VVSW +M++ +Q G + ++LR+G N+ TF
Sbjct: 76 SLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTF 130
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/590 (37%), Positives = 329/590 (55%), Gaps = 34/590 (5%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A+ +HA I+ S + T+++AY KCG L +A KLFD +P +D V W ++S +
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
++ P A + +L GL+P+ F SS++KA + G+ K G+Q+HA L + +
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDD 146
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE-------------- 175
V SSL+DMYA+F+ D +F ++ + +SW A+I+G+AR
Sbjct: 147 VVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFK 206
Query: 176 -----------------GEKALRTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWV 217
AL F EM REG SSV A A++ E GK V
Sbjct: 207 NLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQV 266
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
H VI G + F+ N LVDMYAK + A+ +F + ++DVVSW S++ G AQHGL
Sbjct: 267 HCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLA 326
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVT 336
+ + ++ M+ G+ PN+VTF+ ++ ACSH GL+ +G+ F ++++ G+ P HY
Sbjct: 327 EEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTC 386
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHD 396
+DL R+G LD A IR MP++P W ALL AC+ H N ++ A+ + +L P D
Sbjct: 387 LLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPED 446
Query: 397 SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQR 456
+ILL+NIYA AG + + RK+M VKK P S V+ +F A + + P +
Sbjct: 447 PSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMK 506
Query: 457 AMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGST 516
I ++ ++++ GYVPD+S VL DQQE+E +L HSE+LALA+ L+ PG+T
Sbjct: 507 DEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTT 566
Query: 517 IHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+RVCGDCH+ K S + REI VRD R+HHF+DG CSC D+W
Sbjct: 567 IRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 158/315 (50%), Gaps = 35/315 (11%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+K + +HA L S F D +++++++ YAK D R +FD + ++WTA+ISG
Sbjct: 127 VKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISG 186
Query: 68 YS-------------------------------QNDQPENAIILFSQMLRLGLK-PNQFT 95
Y+ Q+ +A+ LF +M R G+ +
Sbjct: 187 YARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLV 246
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
LSSV+ A A + G+QVH + GY+ +++ ++L+DMYA+ + A ++F +
Sbjct: 247 LSSVVGACANSAVRE-LGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEM 305
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
K+ VSW ++I G A+ E+AL + +M+ G +P ++ + A + G + +G+
Sbjct: 306 RRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGR 365
Query: 216 WVHAHVIKSGGQLVAFVGNT-LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQ 273
+ +++ G + T L+D++++SG +++AE + + +K D +W ++L+ C
Sbjct: 366 ALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKH 425
Query: 274 HGLGKATVRWFEKML 288
HG K VR + +L
Sbjct: 426 HGNTKMAVRIADHLL 440
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
L LK F+L G + +++HA +K G + + +L+D Y + +
Sbjct: 10 LALKSQLFSL---------GRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLK 60
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
DA LF AL ++ V+W +++ + KA +L EG +P HF +SS+ A A
Sbjct: 61 DALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACA 120
Query: 207 STGS--LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ GS ++ GK +HA + S V ++LVDMYAK + VF+ + + +SW
Sbjct: 121 NLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISW 180
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
+M++G A+ G + F R N + +++ +G ++ F M++
Sbjct: 181 TAMISGYARSGRKLEALELF----RESPFKNLYAWTALISGLVQSGNANDALYLFVEMRR 236
Query: 325 HGV 327
GV
Sbjct: 237 EGV 239
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/542 (38%), Positives = 321/542 (59%), Gaps = 3/542 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ N++++ + G +++A +LF++MP +++++WT++I G N + A+++F +ML
Sbjct: 173 DVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML 232
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
K TL+ L A A G Q+H +K GY +N Y+ +SL+ YA +
Sbjct: 233 A-SFKATSSTLACALTAC-ANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLI 290
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
D+A +F S+N V W AL+ G+ AL+ F M+R P S +S +
Sbjct: 291 DNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSC 350
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++++G+ VHA K G + FV N+LV MY K G I D VF R+ +++VVSWN
Sbjct: 351 CGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWN 410
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMKK 324
S++ GCAQHG G+ + F +M+R + P+++T +L+AC H+G+L +G+ +F K
Sbjct: 411 SIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKN 470
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
G+E HY + VDLLGR G L+ A I MP + VW ALL + H NV +
Sbjct: 471 FGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAER 530
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+ + +L P+ S + LL+N+YAS G+ + ++ RK MK+ G+ K+P SW+ K H
Sbjct: 531 AAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKH 590
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F++ D +HP I++K + K+K++GYVPD + +++E L HSE+LA+
Sbjct: 591 NFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAI 650
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
F LIST GSTI + KN+R+CGDCH+A K SKVV REI+VRD +RFHHF +G CSCGD
Sbjct: 651 GFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGD 710
Query: 565 YW 566
YW
Sbjct: 711 YW 712
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 149/263 (56%), Gaps = 3/263 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H I+ + + + + ++++ YA C +D A +F++ +++V WTAL++GY N +
Sbjct: 261 IHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCR 320
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A+ +F M+R+ + PNQ +L+S L + D+ GR+VHA K G + +++V +
Sbjct: 321 HTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDR-GREVHAVAHKLGLESDIFVSN 379
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ MY + ++D +FT + KN VSWN++I G A+ G AL F++M+R +P
Sbjct: 380 SLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDP 439
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKV 252
+ + + +A +G L +G+ H K+ G ++ +++VD+ + G +E+AE +
Sbjct: 440 DEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEAL 499
Query: 253 FNRLL-KRDVVSWNSMLTGCAQH 274
+ + K + + W ++L+ H
Sbjct: 500 IHIMPGKANYMVWLALLSSSINH 522
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 20/424 (4%)
Query: 8 LKEARIVHAHILGSAFKND-IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
L+ RI A L + + + + ++ YA G L++A KLF EMPVKD+++W +++
Sbjct: 61 LRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLK 120
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL-KYGY 125
G + A +F +M + ++ +L +FGR A CL +
Sbjct: 121 GCLKCGDLTMACNMFDKMSERNVVSWTTIINGLL----------EFGRVEVAECLFRVMP 170
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+V +S++ + +++DA LF + ++N +SW ++I G +AL F +
Sbjct: 171 TKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHK 230
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
ML F+ T + + TA A+ + G +H ++K+G ++ +L+ YA
Sbjct: 231 ML-ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKL 289
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
I++A +FN + R+VV W ++LTG + ++ F+ M+R + PNQ + L +
Sbjct: 290 IDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNS 349
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C +D G+ A+ K G+E + + V + + G ++ + M
Sbjct: 350 CCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKNVVS 408
Query: 366 WGALLGACRMH--KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
W +++ C H L +A +DP + I LA + ++ G + R
Sbjct: 409 WNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDE----ITLAGLLSACGHSGMLTKGRCFF 464
Query: 424 KESG 427
K G
Sbjct: 465 KHFG 468
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 2 CTHLKKLKEARIVHA--HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C L+ + R VHA H LG ++DI + N+++ Y KCG +++ +F M K++V
Sbjct: 350 CCGLEAVDRGREVHAVAHKLG--LESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVV 407
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++I G +Q+ A+ LF+QM+R + P++ TL+ +L A G K F
Sbjct: 408 SWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHF 467
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEK 178
+G + SS++D+ R+ Q+++A L + K N + W AL++ S
Sbjct: 468 GKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHV 527
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
A R +L +P + S+ +T L++ + GKW I+
Sbjct: 528 AERAAKCVL--DLQP---NCSAAYTLLSNLYA-STGKWTEVSKIR 566
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 348/603 (57%), Gaps = 42/603 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKL--FDEMPVKDMV 59
C +L ++K+ VHA IL + + ++ K + L F+++ +
Sbjct: 56 CKNLTQIKQ---VHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPF 112
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA- 118
+ ALI GY ++ + + +S M + G+ P FT +++ KA GA D GRQ+H
Sbjct: 113 LYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGA-KMDVGLGRQIHGQ 171
Query: 119 FCLKYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DD 147
L G+ +++VG+S++DMY + FD+M +
Sbjct: 172 TILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMES 231
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF L K+ V+W +++G A+ ++ +A+ F +M G E + V +A A
Sbjct: 232 AGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQ 291
Query: 208 TGSLEQGKWVHAHVIKS--GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G+ + W+ KS GG+ VG+ L+DMY+K GS+ DA +VF + +R+V S++
Sbjct: 292 LGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYS 351
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
SM+ G A HG ++ F++M++ I PN+VTF+ VLTACSHAG++++G F LM+K
Sbjct: 352 SMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKC 411
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+G++P HY VDLLGRAG L A + ++ MPIEP VWGALLGACR+HK+ ++ A
Sbjct: 412 YGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAI 471
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET-KNAV 443
AA +FEL+P+ G +ILLANIYAS GR ND + RK+M+ G++K PA SW+E+ K V
Sbjct: 472 AANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMV 531
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F + D HP+ I + ++ ++++ GY P S V + +++ L HSEKLA
Sbjct: 532 HEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLA 591
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
LAF LIST PGS I I KN+R+C DCHS AS++ REIIVRD RFHHF DG CSCG
Sbjct: 592 LAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCG 651
Query: 564 DYW 566
++W
Sbjct: 652 NFW 654
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 328/544 (60%), Gaps = 13/544 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ +L+ Y + G + EAR LFDEMP +++V+WTA+ISGY+QN + A LF M
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP 232
Query: 86 RLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
+ N+ + +++L AG +D A + V ++++ + +
Sbjct: 233 ----ERNEVSWTAMLVGYIQAGHVEDA------AELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D A +F + +++ +W+A+I + + +AL TF EML G P + S S+ T
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+ L+ G+ VHA +++ + F + L+ MY K G+++ A++VF+ +D+V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK- 323
NSM+TG AQHGLG+ + F M G++P+ +T++ LTACS+ G + EG+ F M
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ P HY VDLLGR+GL++ A I+ MP+EP A +WGAL+GACRMH+N E+
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAE 522
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+AA+++ EL+P ++GP++LL++IY S GR DA++ RK + + K P CSW+E V
Sbjct: 523 FAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV 582
Query: 444 HMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
H+F + D AHP+ A I + ++ + + GY D S VL D++++ L+ HSE+
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQ 642
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+A+ L+ P G I + KN+RVCGDCHSA K +K+ REII+RD NRFHHF+DGFCSC
Sbjct: 643 AVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSC 702
Query: 563 GDYW 566
DYW
Sbjct: 703 RDYW 706
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 146/261 (55%), Gaps = 3/261 (1%)
Query: 16 AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPE 75
A + + ++ +A N ++ + + G +D A+ +F++M +D TW+A+I Y QN+
Sbjct: 256 AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLM 315
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSL 135
A+ F +ML G++PN ++ S+L A A D +GR+VHA L+ +D +V+ S+L
Sbjct: 316 EALSTFREMLWRGVRPNYPSVISILTVCAALAVLD-YGREVHAAMLRCSFDMDVFAVSAL 374
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
+ MY + +D A +F E K+ V WN++I G+A+ GE+AL F +M G P
Sbjct: 375 ITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 196 FSYSSVFTALASTGSLEQGKWV-HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA-EKVF 253
+Y TA + TG +++G+ + ++ + S + A + +VD+ +SG +E+A + +
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 254 NRLLKRDVVSWNSMLTGCAQH 274
N ++ D V W +++ C H
Sbjct: 495 NMPVEPDAVIWGALMGACRMH 515
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 170/422 (40%), Gaps = 68/422 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N + A+ G ++ AR F+ MP++ ++ AL++GY +N P+ A+ LF +M L
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 91 PNQFTLSSV------LKASGAGATDDKFGRQVHAFC-LKYGY------------------ 125
+S + L + A F V +F L GY
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 126 ------------------------------DWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
D +V +++L Y + ++ +A LF +
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+N VSW A+I+G+A+ E A + F M E S++++ G +E
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDA- 255
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
A + + + N ++ + + G ++ A+ VF ++ +RD +W++M+ Q+
Sbjct: 256 ---AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNE 312
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ F +ML G+ PN + + +LT C+ +LD G+ A M + + +
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMHKNVE--LGAYAAERIFEL 392
+ + + G LD+A + EP V W +++ H E LG + R+ +
Sbjct: 373 ALITMYIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430
Query: 393 DP 394
P
Sbjct: 431 SP 432
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VHA +L +F D+ + ++ Y KCG LD+A+++F KD+V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV-HAF 119
++I+GY+Q+ E A+ +F M G+ P+ T L A S G K GR++ ++
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV--KEGREIFNSM 460
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG 169
+ S ++D+ R +++A+ L + + V W AL+
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 47/226 (20%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N + A++G+IE A F + R S+N++L G ++ L A + F +M +A
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 294 -----------------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
P+ V+F +L GLL + F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 325 HGVEPEEAHYVTFVDLLG---RAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVE 380
PE H V++ LLG AG ++ A + EMP A W A+L G C+ + E
Sbjct: 139 ----PERNH-VSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVA-WTAMLSGYCQAGRITE 192
Query: 381 LGAYAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
A +F E+ + + + YA G +N A + ++M E
Sbjct: 193 -----ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPE 233
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/565 (39%), Positives = 333/565 (58%), Gaps = 7/565 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R +HA+++ + F DI++ N++ Y G EA KLF M KD+V+W
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +ISGY N P+ AI + M + +KP++ T+++VL A A D G ++H +
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC-ATLGDLDTGVELHKLAI 425
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K V V ++L++MY++ +D A +F + KN +SW ++IAG + +AL
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL- 484
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ++ +P + ++ A A G+L GK +HAHV+++G L F+ N L+DMY
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G + A FN K+DV SWN +LTG ++ G G V F++M+++ + P+++TF+
Sbjct: 545 RCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFIS 603
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L CS + ++ +G YF+ M+ +GV P HY VDLLGRAG L A KFI++MP+ P
Sbjct: 604 LLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
AVWGALL ACR+H ++LG +A+ IFELD G +ILL N+YA G+ + A+ R+
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
MMKE+G+ + CSWVE K VH F+++D HPQ I+ EK+ ++G S
Sbjct: 724 MMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISES 783
Query: 482 VLSYADQQE--REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S D+ E R+ HSE+ A+AF LI+T PG I + KN+ +C +CH KF SK
Sbjct: 784 --SSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKT 841
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGD 564
V REI VRD FHHF+DG CSCGD
Sbjct: 842 VRREISVRDAEHFHHFKDGECSCGD 866
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 195/380 (51%), Gaps = 11/380 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + +E V++ L S + + N L + + G L +A +F +M +++ +W
Sbjct: 104 CEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSW 163
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
L+ GY++ + A+ L+ +ML +G +KP+ +T VL+ G G D G++VH
Sbjct: 164 NVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG-GIPDLARGKEVHVHV 222
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++YGY+ ++ V ++L+ MY + + A LF + ++ +SWNA+I+G+ + L
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M +P + +SV +A G G+ +HA+VI +G + V N+L MY
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+GS +AEK+F+R+ ++D+VSW +M++G + L + + M ++ + P+++T
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA 402
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV----TFVDLLGRAGLLDRALKFIRE 356
VL+AC+ G LD G + K ++ YV +++ + +D+AL
Sbjct: 403 AVLSACATLGDLDTG----VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458
Query: 357 MPIEPTAAVWGALLGACRMH 376
+P W +++ R++
Sbjct: 459 IP-RKNVISWTSIIAGLRLN 477
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 332/547 (60%), Gaps = 6/547 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +H+ + F ++ + + +++ YAKC + A K+F+EMPV+++V+W
Sbjct: 140 CTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSW 199
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKP-NQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+I G+ QN + AI F +L L ++ + SSV A A A + +FG+QVH
Sbjct: 200 NTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSAC-ANAGNLEFGKQVHGVA 258
Query: 121 LKYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK G WN VY+ +SL DMY + +D LF+ +++ V+WN +I + E A
Sbjct: 259 LKLGV-WNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDA 317
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+F M R+G P SYSSV + A+ +L QG +H +I+SG V ++L+ M
Sbjct: 318 CNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITM 377
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK GS+ DA ++F R+VV W +++ C QHG V FE+MLR GI P+ +TF
Sbjct: 378 YAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITF 437
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL+ACSH G ++EG YF +++K HG+ P HY VDLL RAG LDRA +FI MP
Sbjct: 438 VSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMP 497
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
I+P A+VWGALL ACR H N+ +G A ++F+L+P + G ++LL NI G LN+A
Sbjct: 498 IKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADE 557
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R+ M+ GV+KEP CSW++ KN+ ++F +D +H + I++ ++ E +K+ GYV +
Sbjct: 558 VRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAE 617
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+ ++ A++ +E L HSEK+ALAF L+S P G+ I IKKN+R CGDCH+ KFAS+
Sbjct: 618 TEFAINTAEEY-KEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASE 676
Query: 539 VVEREII 545
+ REII
Sbjct: 677 IFAREII 683
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 190/371 (51%), Gaps = 5/371 (1%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMVTWTALIS 66
K A +H+ ++ +A + + N +LN YAKCG +D+ LF P K++V+WT+LI+
Sbjct: 44 KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
++ +P A+ F+ M R G+ PN +T S+VL A T G Q+H+ K+G+
Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSAC-TDTTASVHGEQMHSLVWKHGFL 162
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
V+V S+L+DMYA+ M A +F + +N VSWN +I G + ++A+ F +
Sbjct: 163 AEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTL 222
Query: 187 LREGFEP-THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
L E S+SSVF+A A+ G+LE GK VH +K G + ++ N+L DMY K G
Sbjct: 223 LLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGL 282
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
D K+F+ RDVV+WN M+ + + F M R G P++ ++ VL +
Sbjct: 283 FNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHS 342
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C++ L +G + + G + + + + G L A + E +
Sbjct: 343 CANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE-DRNVVC 401
Query: 366 WGALLGACRMH 376
W A++ AC+ H
Sbjct: 402 WTAIIAACQQH 412
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 7/262 (2%)
Query: 95 TLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
+L+S+L S K Q+H+ + ++ ++LL++YA+ +D LF++
Sbjct: 32 SLNSLLNCSRTS----KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSS 87
Query: 155 L--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+SKN VSW +LI R KAL F+ M R G P H+++S+V +A T +
Sbjct: 88 APDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASV 147
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
G+ +H+ V K G FV + LVDMYAK + AEKVF + R++VSWN+M+ G
Sbjct: 148 HGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFL 207
Query: 273 QHGLGKATVRWFEK-MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
Q+ L + +F+ +L N A ++V+F V +AC++AG L+ G+ + K GV
Sbjct: 208 QNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV 267
Query: 332 AHYVTFVDLLGRAGLLDRALKF 353
+ D+ G+ GL + K
Sbjct: 268 YINNSLSDMYGKCGLFNDVAKL 289
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 329/525 (62%), Gaps = 2/525 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ +H+ + + F++D+ + +++ Y+K G L++AR++ + + KD+V+W
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q++ ++A+ F +M + G+ P+ L+S + AG + G Q+HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC-AGINAMRQGLQIHARIY 473
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY +V + ++L+++YAR ++ +A+ F +E K+E++WN L++G A+ E+AL+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M + G + F++ S +A A+ ++QGK +HA VIK+G VGN L+ +Y
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS EDA+ F+ + +R+ VSWN+++T C+QHG G + F++M + GI PN VTF+
Sbjct: 594 KCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIG 653
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL++EG YF M ++G+ P HY +D+ GRAG LDRA KFI EMPI
Sbjct: 654 VLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIA 713
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VW LL AC++HKN+E+G +AA+ + EL+PHDS ++LL+N YA + + + R
Sbjct: 714 ADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVR 773
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMM++ GV+KEP SW+E KN VH F D HP I+ I++++ ++GY +
Sbjct: 774 KMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKY 833
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRV 525
H+ +Q+ R+ VHSEKLA+ F L+S PP + + KN+RV
Sbjct: 834 HLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 192/364 (52%), Gaps = 2/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + N +++ Y+K G + AR++F+E+ +D V+W A++SGY+QN
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ L+ QM R G+ P + LSSVL +S A GR +HA K+G+ ++VG+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVL-SSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+++ +Y R A +F + ++ V++N LI+GHA+ GE AL F EM G P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ A AS G L++G +H+++ K+G + +L+D+Y K G +E A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +VV WN ML Q + F +M GI PNQ T+ C+L C+ +D
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L K G E + +D+ + G L++A + + EM E W +++
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGY 421
Query: 374 RMHK 377
H+
Sbjct: 422 VQHE 425
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 183/356 (51%), Gaps = 1/356 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + R++HA F ++I + N ++ Y +CG A ++F +MP +D VT+
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISG++Q E+A+ +F +M GL P+ T+SS+L A+ A D + G Q+H++
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL-AACASLGDLQKGTQLHSYLF 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SLLD+Y + ++ A +F + + N V WN ++ + ++ K+
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G P F+Y + T ++ G+ +H+ +K+G + +V L+DMY+
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E A +V L ++DVVSW SM+ G QH K + F++M + GI P+ +
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLAS 451
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
++ C+ + +G A + G + + + V+L R G + A E+
Sbjct: 452 AISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 45/404 (11%)
Query: 65 ISGYSQNDQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++G+ ++ P + LF+ R GL P F + L+A + ++HA +
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDF--ACALRACRGNGRRWQVVPEIHAKAVT 70
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G VG+ L+D+Y++ + A +F L +++ VSW A+++G+A+ GE+AL
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+ +M R G PT + SSV ++ QG+ +HA K G FVGN ++ +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
GS AE+VF + RD V++N++++G AQ G G+ + FE+M +G++P+ VT +
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF--------- 353
L AC+ G L +G + + K G+ + + +DL + G ++ AL
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310
Query: 354 -------------------------IREMPIEPTAAVWGALLGACRMHKNVELG----AY 384
++ I P + +L C + ++LG +
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ + FE D + SG +L ++Y+ G L A R +M+KE V
Sbjct: 371 SVKTGFESDMYVSG---VLIDMYSKYGWLEKARRVLEMLKEKDV 411
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 326/576 (56%), Gaps = 13/576 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-----LDEARKLFDEMPVK 56
CT L+ L + V A G + A +L + G L AR++FD +P
Sbjct: 38 CTSLRALAQLHAV-AVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHP 96
Query: 57 DMVTWTALI-----SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK 111
V W + G E A +F +M+ G+ P+ +T S+LKA A A +
Sbjct: 97 GDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKAC-ASARAGE 155
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
GRQ H +K G + YV +L++MYA + A +F ++ + VS+NA+I
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASV 215
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
R S +AL F EM +G +PT + SV +A A G+LE G+W+H ++ K +
Sbjct: 216 RSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVK 275
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
V L+DMYAK GS+EDA VF + RD +W+ M+ A HG G+ + FE+M + G
Sbjct: 276 VNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQG 335
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P+ VTFL VL ACSH+G++ EG YF M+++G+ HY DLL R+G L+RA
Sbjct: 336 MKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAY 395
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
KFI E+PI+PTA +W LL AC H +V++G ERI ELD G +++ +N+ A+ G
Sbjct: 396 KFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTG 455
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
R + RK+M E GV K P CS +E N VH F A D +HP + E+ E++K
Sbjct: 456 RWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLK 515
Query: 472 QIGYVPDSSHVLSY-ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+GYVP++SHV ++E+ L+ HSEKLA++F L++T PG+T+ I KN+RVC DCH
Sbjct: 516 LVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCH 575
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S K S V R II+RD NRFHHF DG CSCGDYW
Sbjct: 576 SMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 51/261 (19%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQL---VAFVGNTLVDMYAKSGS-----IEDAEKVFNRL 256
L SL +HA +K+GG L AFV L+ + + G+ + A +VF+R+
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFV-TRLLTLCTEQGAEAPAHLAYARQVFDRI 93
Query: 257 L-KRDVVSWNSMLTGCAQHGLGKATVRW----FEKMLRNGIAPNQVTFLCVLTACSHAGL 311
DVV +N++L G A+ G G F +M+ G+AP+ TF+ +L AC+ A
Sbjct: 94 PHPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARA 153
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG-------LLDR--------------- 349
+EG+ + K G E T +++ G + DR
Sbjct: 154 GEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITA 213
Query: 350 ---------ALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
AL REM ++PT+ ++L AC + +ELG + + I ++ DS
Sbjct: 214 SVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR-LDS 272
Query: 398 GPHI--LLANIYASAGRLNDA 416
+ L ++YA G L DA
Sbjct: 273 LVKVNTALIDMYAKCGSLEDA 293
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/570 (37%), Positives = 328/570 (57%), Gaps = 8/570 (1%)
Query: 1 KCTHLKKLKE--ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
KC L++L + A + +HI +F +A + AR LF+ M D+
Sbjct: 38 KCNSLRELMQIQAYAIKSHIEDVSF---VAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
V + ++ GYS+ P LF ++L G+ P+ +T S+LKA ++ GRQ+H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE-GRQLHC 153
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G D NVYV +L++MY + +D A +F + V +NA+I G+AR++ +
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F EM + +P + SV ++ A GSL+ GKW+H + K V L+D
Sbjct: 214 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
M+AK GS++DA +F ++ +D +W++M+ A HG + ++ FE+M + P+++T
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 299 FLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
FL +L ACSH G ++EG+ YF+ M K G+ P HY + VDLL AG L+ A +FI ++
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKL 393
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PI PT +W LL AC H N++L +ERIFELD G +++L+N+YA +
Sbjct: 394 PISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
RK+MK+ K P CS +E N VH F + D +H+ E+ +++K GYVP
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVP 513
Query: 478 DSSHVL-SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
D+S V+ + + QE+E L+ HSEKLA+ F L++TPPG+TI + KN+RVC DCH+A K
Sbjct: 514 DTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLI 573
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + R+++ RD RFHHF DG CSCGD+W
Sbjct: 574 SLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/566 (37%), Positives = 334/566 (59%), Gaps = 36/566 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ +H + ++ + N ++ Y KCGCL EAR + DEM KD+V+W
Sbjct: 143 CSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSW 202
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++GY+QN Q ++A+ + +M + KP+ T++S+L A ++++
Sbjct: 203 NSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVL--------- 253
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
YV +F LE K+ VSWN +I+ + + S K++
Sbjct: 254 --------YVEE-----------------MFMNLEKKSLVSWNVMISVYMKNSMPGKSVD 288
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+ +M + EP + +SV A +L G+ +H +V + + N+L+DMYA
Sbjct: 289 LYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYA 348
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G +EDA++VF+R+ RDV SW S+++ G G V F +M +G +P+ + F+
Sbjct: 349 RCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVA 408
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSH+GLL+EG+ YF M + + P H+ VDLLGR+G +D A I++MP++
Sbjct: 409 ILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P VWGALL +CR++ N+++G AA+++ +L P +SG ++LL+NIYA AGR + R
Sbjct: 469 PNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIR 528
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MK ++K P S VE N VH F+A D HPQ I+++ + K+K++GYVP +
Sbjct: 529 SLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTD 588
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +++++E L VHSEKLA+ FA+++T S I I KN+RVCGDCH A K SK+V
Sbjct: 589 SALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIAAKLISKIV 647
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI++RDTNRFHHF+DG CSCGDYW
Sbjct: 648 QREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 20/327 (6%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D K + VH+ + N +G L+ YA + A +F + +N + +N +I
Sbjct: 47 DIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIR 106
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ + AL F +M+ GF P H++Y V A + + +L G +H V K G L
Sbjct: 107 SYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDL 166
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL---GKATVRWFE 285
FVGN L+ +Y K G + +A V + + +DVVSWNSM+ G AQ+ R +
Sbjct: 167 NLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMD 226
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+ + A + L +T S +L + + L KK V + + + +
Sbjct: 227 GVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVS-----WNVMISVYMKNS 281
Query: 346 LLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAERIFE-LDPHDSGPHI 401
+ +++ +M +EP A ++L AC + LG RI E ++ P++
Sbjct: 282 MPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLG----RRIHEYVERKKLCPNM 337
Query: 402 LLAN----IYASAGRLNDAARARKMMK 424
LL N +YA G L DA R MK
Sbjct: 338 LLENSLIDMYARCGCLEDAKRVFDRMK 364
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/591 (38%), Positives = 335/591 (56%), Gaps = 35/591 (5%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMVTWTALISG 67
E R VHA I+ + I + A A+++F E + W + +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKA 102
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
++ D P +AI+LF ++ + + P+ FT SSVL+A D GR +H K G+
Sbjct: 103 LAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC-LNLLDLSNGRILHGVVEKVGFRS 161
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWN----------------------- 164
N+Y+ + ++ +YA +M +A LF + ++ V+WN
Sbjct: 162 NLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP 221
Query: 165 --------ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
++IAG+ + + ++A+ F++M G + + +V A A G+L+ G
Sbjct: 222 ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 281
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H + + G + + NTL+DMY K G +E+A KVF + +R VVSW++M+ G A HG
Sbjct: 282 IHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGR 341
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYV 335
+ +R F M + GI PN VTF+ +L ACSH GL+ EG+ +FA M + +G+ P+ HY
Sbjct: 342 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYG 401
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VDLL RAGLL A +FI MP++P VWGALLGACR+HKNVE+ A + + ELDP
Sbjct: 402 CMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPL 461
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
+ G +++L+NIYA AGR D AR RK MK+ VKK P S + VH FVA +++HP
Sbjct: 462 NDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPD 521
Query: 456 RAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGS 515
I ++W E+ E+++ GYVP++S VL ++ E+ + HSEKLAL F L++TP +
Sbjct: 522 TEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAET 581
Query: 516 TIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I I KN+R+C DCHSAFK S +V REI+VRD NRFH F D CSC DYW
Sbjct: 582 PIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 164/308 (53%), Gaps = 38/308 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT- 60
C +L L RI+H + F++++ +QN I++ YA CG + EAR LF++MP +D+VT
Sbjct: 138 CLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTW 197
Query: 61 ------------------------------WTALISGYSQNDQPENAIILFSQMLRLGLK 90
WT++I+GY Q + + AI LF++M G+K
Sbjct: 198 NIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257
Query: 91 PNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
N+ T+ +VL A + GA D G ++H + ++G+ NV + ++L+DMY + +++A
Sbjct: 258 CNEVTVVAVLAACADLGALD--LGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEAC 315
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F +E + VSW+A+I G A E+ALR FS+M + G EP ++ + A + G
Sbjct: 316 KVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMG 375
Query: 210 SLEQGKWVHAHVIKSGGQL--VAFVGNTLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNS 266
+ +G+ A + + G + + G +VD+ +++G + +A E + N +K + V W +
Sbjct: 376 LISEGRRFFASMTRDYGIIPQIEHYG-CMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 434
Query: 267 MLTGCAQH 274
+L C H
Sbjct: 435 LLGACRVH 442
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 23/268 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L +H + FK ++ + NT+++ Y KCGCL+EA K+F+EM + +V+W
Sbjct: 270 CADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSW 329
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I G + + + E A+ LFS M ++G++PN T +L A + R +
Sbjct: 330 SAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR 389
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARKSEGE 177
YG + ++D+ +R + +A F+ N V W AL+ H E
Sbjct: 390 DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAE 449
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA----------HVIKSGGQ 227
+A++ E+ +P + Y V + + + E G+W V K+ G
Sbjct: 450 EAIKHLLEL-----DPLNDGYYVVLSNIYA----EAGRWEDTARVRKFMKDRQVKKTPGW 500
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
V + + A S D E++F R
Sbjct: 501 SSITVDGVVHEFVAGEESHPDTEQIFQR 528
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/615 (36%), Positives = 353/615 (57%), Gaps = 50/615 (8%)
Query: 1 KCTHL-KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM------ 53
KC L L+ + VHA +L + D+ + N+IL+ Y KC + A +LF+ M
Sbjct: 398 KCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVV 457
Query: 54 -------------------------PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
P KD+V+W ++ G Q +A+ M+ G
Sbjct: 458 SWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECG 517
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+ + T S L + + + + GRQ+H LK+G+D + ++ SSL++MY + +MD A
Sbjct: 518 TEFSAVTFSIALILASS-LSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKA 576
Query: 149 WFLF-----TALESKNE-----------VSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+ L N VSW ++++G+ + E L+TF M+RE
Sbjct: 577 SIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVV 636
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+ +++ +A A+ G LE G+ VHA+V K G ++ A+VG++L+DMY+KSGS++DA V
Sbjct: 637 VDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMV 696
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F + + ++V W SM++G A HG G + FE+ML GI PN+VTFL VL ACSHAGL+
Sbjct: 697 FRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLI 756
Query: 313 DEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+EG YF +MK + + P H + VDL GRAG L + FI + I +VW + L
Sbjct: 757 EEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLS 816
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+CR+HKNVE+G + +E + ++ P D G ++LL+N+ AS R ++AAR R +M + GVKK+
Sbjct: 817 SCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQ 876
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
P SW++ K+ +H FV D +HPQ I+ + ++K+IGY D V+ ++++
Sbjct: 877 PGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQG 936
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E + HSEKLA+ F +I+T + I I KN+R+C DCH+ K+AS++++REIIVRD +R
Sbjct: 937 EVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHR 996
Query: 552 FHHFRDGFCSCGDYW 566
FHHF+ G CSCGDYW
Sbjct: 997 FHHFKHGSCSCGDYW 1011
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 214/447 (47%), Gaps = 56/447 (12%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +L YAK + A+KLFDE+P ++ TWT LISG+++ E LF +M G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PNQ+TLSSVLK + + G+ VHA+ L+ G D +V +G+S+LD+Y + + A
Sbjct: 388 PNQYTLSSVLKCCSLD-NNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAER 446
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSE---------------MLREGFE--- 192
LF + + VSWN +I + R + EK+L F +L+ G+E
Sbjct: 447 LFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHA 506
Query: 193 ----------PTHFSYSSVFTALASTGSL---EQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
T FS + AL SL E G+ +H V+K G F+ ++LV+M
Sbjct: 507 LEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEM 566
Query: 240 YAKSGSIEDAE----------------KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
Y K G ++ A +V + K +VSW SM++G +G + ++
Sbjct: 567 YCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKT 626
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F M+R + + T +++AC++AG+L+ G+ A ++K G + + +D+ +
Sbjct: 627 FRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSK 686
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH--- 400
+G LD A R+ EP +W +++ +H G +A E+ P+
Sbjct: 687 SGSLDDAWMVFRQSN-EPNIVMWTSMISGYALHGQ---GMHAIGLFEEMLNQGIIPNEVT 742
Query: 401 -ILLANIYASAGRLNDAARARKMMKES 426
+ + N + AG + + R +MMK++
Sbjct: 743 FLGVLNACSHAGLIEEGCRYFRMMKDA 769
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 46/301 (15%)
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+HA +K G + + LL +YA+ + M A LF + +N +W LI+G AR
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
E F EM +G P ++ SSV + +L+ GK VHA ++++G + +GN+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML--------------------------- 268
++D+Y K E AE++F + + DVVSWN M+
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 269 ----TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
G Q G + + M+ G + VTF L S ++ G+ ++ K
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI-------------EPTAAV--WGAL 369
G + + + V++ + G +D+A +R++P+ EP A + WG++
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610
Query: 370 L 370
+
Sbjct: 611 V 611
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 165 ALIAGHARKSE-GEKALRTFSEMLREGFEPTHFSYSSVFTALAS------TGSLEQGKWV 217
A++ G S+ ++++ T +L GF + + Y ++ S + S +
Sbjct: 252 AVVGGSMLASKISQRSVATVGGLLFIGFSISSYFYPPLWLQSCSLYHFTLSNSPPPLGTL 311
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
HA +K+G N L+ +YAKS ++ A+K+F+ + +R+ +W +++G A+ G
Sbjct: 312 HALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSS 371
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
+ F +M G PNQ T VL CS L G+G A M ++G++ + +
Sbjct: 372 EMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSI 431
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
+DL + + + A + E+ E W ++GA +VE
Sbjct: 432 LDLYLKCKVFEYAERLF-ELMNEGDVVSWNIMIGAYLRAGDVE 473
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/565 (38%), Positives = 325/565 (57%), Gaps = 12/565 (2%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ + +H+H++ + +I ++ I N Y +CG L+ A+ +FD M ++ VTWT L+ G
Sbjct: 204 LELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVG 263
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y+Q + E A+ LF++M G++ ++F S VLK G D GRQ+H+ +K G +
Sbjct: 264 YTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC-CGLEDWDMGRQIHSHIVKLGAES 322
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V VG+ L+D Y + ++ A+ F + N+VSW+ALI+G ++ E ++ F+ +
Sbjct: 323 EVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLR 382
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG F Y+SVF A A+ +L G H IK G + + +V MY+K G ++
Sbjct: 383 SEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLD 442
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A + F + + D V+W ++++G A HG + +F +M G+ PN VTF+ VLTACS
Sbjct: 443 YARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACS 502
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL+ E + Y M + +GV+P HY +D RAGLL AL+ I MP EP A W
Sbjct: 503 HSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSW 562
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
+LLG C H +++LG AAE +F LDP D+ +ILL N+Y++ G+ +A RK+M E
Sbjct: 563 KSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAER 622
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWRE-----ISEKIKQIGYVPDSSH 481
+KKE +CSW+ K VH FV D HPQ I+ K E I ++ + D S
Sbjct: 623 ELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSC 682
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
LS R+ +L HSEKLA+AF LIST + I + KN+R C DCH K S V
Sbjct: 683 SLS-----ARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTG 737
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+I+VRD+ RFHHF+ G CSC DYW
Sbjct: 738 RQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 192/377 (50%), Gaps = 2/377 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L + R++H + + +++N +L Y CG + +K+FDEM +K++V+W
Sbjct: 97 CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSW 156
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+IS Y++N + E AI LFS M G++PN S+L+ S G + + G+Q+H+ +
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQ-SCLGPSFLELGKQIHSHVI 215
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + N+ V +++ +MY R ++ A +F ++++N V+W L+ G+ + + E AL
Sbjct: 216 RAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALE 275
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F+ M EG E F +S V + G+ +H+H++K G + VG LVD Y
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYV 335
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G IE A + F R+ + + VSW+++++G +Q G + ++ F + G+ N +
Sbjct: 336 KCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
V AC+ L+ G K G+ V + + G LD A + + EP
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EP 454
Query: 362 TAAVWGALLGACRMHKN 378
A W A++ H N
Sbjct: 455 DAVAWTAIISGYAYHGN 471
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
EM T SY +F A SL G+ +H + ++ + N L+ MY
Sbjct: 75 LKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCD 134
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
GS D +KVF+ +L +++VSW +++ A++G + +R F M +GI PN ++ +
Sbjct: 135 CGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSL 194
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L +C L+ G+ + + + + ++ R G L+ A K + +
Sbjct: 195 LQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGA-KLVFDGMDAQN 253
Query: 363 AAVWGALL----GACRMHKNVELGAYAAERIFELD 393
A W L+ A ++ +EL A A ELD
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELD 288
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 329/525 (62%), Gaps = 2/525 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ +H+ + + F++D+ + +++ Y+K G L++AR++ + + KD+V+W
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q++ ++A+ F +M + G+ P+ L+S + AG + G Q+HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC-AGINAMRQGLQIHARIY 473
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY +V + ++L+++YAR ++ +A+ F +E K+E++WN L++G A+ E+AL+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M + G + F++ S +A A+ ++QGK +HA VIK+G VGN L+ +Y
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS EDA+ F+ + +R+ VSWN+++T C+QHG G + F++M + GI PN VTF+
Sbjct: 594 KCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIG 653
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL++EG YF M ++G+ P HY +D+ GRAG LDRA KFI EMPI
Sbjct: 654 VLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIA 713
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VW LL AC++HKN+E+G +AA+ + EL+PHDS ++LL+N YA + + + R
Sbjct: 714 ADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVR 773
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMM++ GV+KEP SW+E KN VH F D HP I+ I++++ ++GY +
Sbjct: 774 KMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKY 833
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRV 525
H+ +Q+ R+ VHSEKLA+ F L+S PP + + KN+RV
Sbjct: 834 HLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 192/364 (52%), Gaps = 2/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + N +++ Y+K G + AR++F+E+ +D V+W A++SGY+QN
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ L+ QM R G+ P + LSSVL +S A GR +HA K+G+ ++VG+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVL-SSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+++ +Y R A +F + ++ V++N LI+GHA+ GE AL F EM G P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ A AS G L++G +H+++ K+G + +L+D+Y K G +E A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +VV WN ML Q + F +M GI PNQ T+ C+L C+ +D
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L K G E + +D+ + G L++A + + EM E W +++
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGY 421
Query: 374 RMHK 377
H+
Sbjct: 422 VQHE 425
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 183/356 (51%), Gaps = 1/356 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + R++HA F ++I + N ++ Y +CG A ++F +MP +D VT+
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISG++Q E+A+ +F +M GL P+ T+SS+L A+ A D + G Q+H++
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL-AACASLGDLQKGTQLHSYLF 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SLLD+Y + ++ A +F + + N V WN ++ + ++ K+
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G P F+Y + T ++ G+ +H+ +K+G + +V L+DMY+
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E A +V L ++DVVSW SM+ G QH K + F++M + GI P+ +
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLAS 451
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
++ C+ + +G A + G + + + V+L R G + A E+
Sbjct: 452 AISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 45/404 (11%)
Query: 65 ISGYSQNDQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++G+ ++ P + LF+ R GL P F + L+A + ++HA +
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDF--ACALRACRGNGRRWQVVPEIHAKAVT 70
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G VG+ L+D+Y++ + A +F L +++ VSW A+++G+A+ GE+AL
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+ +M R G PT + SSV ++ QG+ +HA K G FVGN ++ +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
GS AE+VF + RD V++N++++G AQ G G+ + FE+M +G++P+ VT +
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF--------- 353
L AC+ G L +G + + K G+ + + +DL + G ++ AL
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310
Query: 354 -------------------------IREMPIEPTAAVWGALLGACRMHKNVELG----AY 384
++ I P + +L C + ++LG +
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ + FE D + SG +L ++Y+ G L A R +M+KE V
Sbjct: 371 SVKTGFESDMYVSG---VLIDMYSKYGWLEKARRVLEMLKEKDV 411
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/615 (36%), Positives = 354/615 (57%), Gaps = 53/615 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ ++ + +HA IL + D+ ++N+IL+ Y KC + A F+ M KD+V+W
Sbjct: 144 CSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSW 203
Query: 62 TALISGYSQNDQPENAIILFSQML--------------------RLGLK----------- 90
+I Y + E ++ +F RL L+
Sbjct: 204 NIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTE 263
Query: 91 --PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
P F+++ +L +S + + GRQ+H L +G + + Y+ SSL++MY + +MD A
Sbjct: 264 FSPVTFSIALILVSSLSLV---EVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKA 320
Query: 149 W---------------FLFTALESKNE-VSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
F T E K VSW+++++G+ + E ++TF M+ E
Sbjct: 321 STILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIV 380
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
+ +++ +A A+ G LE GK +HA++ K G ++ A+VG++L+DMY+KSGS++DA +
Sbjct: 381 VDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMI 440
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F ++ + +VV W SM++GCA HG GK + FE ML GI PN+VTF+ VL ACSH GL+
Sbjct: 441 FEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLI 500
Query: 313 DEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
+EG YF +MK + + PE HY + V+L GRAG L A FI E I +VW + L
Sbjct: 501 EEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+CR+HKN +G +E + + P D +ILL+N+ +S + ++AA R +M + GVKK+
Sbjct: 561 SCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQ 620
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
P SWV+ K+ +H F D +HPQ I+ + ++K+IGY D+ V+ ++++
Sbjct: 621 PGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQG 680
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E + HSEKLAL F++I+T P + I I KN+R+C DCH+ FK+AS+++EREIIVRDT+R
Sbjct: 681 EVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHR 740
Query: 552 FHHFRDGFCSCGDYW 566
FHHF+ CSCG+YW
Sbjct: 741 FHHFKQSSCSCGEYW 755
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 219/465 (47%), Gaps = 53/465 (11%)
Query: 12 RIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
R +H H + N +L Y K LD A KLFDE+ K+ TWT LISG+++
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 72 -DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
E LF +M G PNQ+TLSSVLK + + +FG+ +HA+ L+ G +V
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCC-SRENNIQFGKGIHAWILRNGVGGDVV 170
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE----- 185
+ +S+LD+Y + + + A F + K+ VSWN +I + R+ + EK+L F
Sbjct: 171 LENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKD 230
Query: 186 --------------------------MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
M+ G E + ++S ++S +E G+ +H
Sbjct: 231 VVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHG 290
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV-----FNRLLKRD-----------VVS 263
V+ G ++ ++LV+MY K G ++ A + N L K + +VS
Sbjct: 291 RVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVS 350
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W+SM++G +G + ++ F M+ I + T +++AC++AG+L+ G+ A ++
Sbjct: 351 WSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQ 410
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
K G+ + + +D+ ++G LD AL ++ EP +W +++ C +H +
Sbjct: 411 KIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQGKEAI 469
Query: 384 YAAERIFELD--PHDSGPHILLANIYASAGRLNDAARARKMMKES 426
E + L P++ + + N + G + + R +MMK++
Sbjct: 470 SLFEGMLNLGIIPNEV-TFVGVLNACSHVGLIEEGCRYFRMMKDT 513
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P F +S+ T++ S SL + +H H K G + N L+ +Y KS +++ A K
Sbjct: 34 QPCSFLHST--TSIGSPPSL---RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHK 88
Query: 252 VFNRLLKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
+F+ + ++ +W +++G A+ G + F +M +G PNQ T VL CS
Sbjct: 89 LFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSREN 148
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G+G A + ++GV + + +DL + + A F E+ IE W ++
Sbjct: 149 NIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF-ELMIEKDVVSWNIMI 207
Query: 371 GACRMHKNVE 380
GA +VE
Sbjct: 208 GAYLREGDVE 217
>gi|357135729|ref|XP_003569461.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Brachypodium distachyon]
Length = 595
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/573 (39%), Positives = 326/573 (56%), Gaps = 15/573 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIA-----MQNTILNAYAKCG----CLDEARKLFDEMPVK 56
+ L + + +H +L IA + + +L YA+C CL R D
Sbjct: 26 RALPKGQQLHGFLLKGGHLPAIASSHALLSHHLLTFYARCALPELCL---RAFLDLPAPP 82
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FG 113
W++LIS ++QN P A F +ML G+ ++ S KA A A +
Sbjct: 83 PAAAWSSLISSFAQNGLPAAAFDAFRRMLAAGVPATDRSIPSAAKAVAAAADSLRPPLAP 142
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+H K + +V+VGS++LDMYA+ + DA LF + +N VSW+ALI G+A
Sbjct: 143 HALHGLASKTPFAEDVFVGSAVLDMYAKCGNLLDARRLFDEMPERNVVSWSALIGGYADA 202
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
AL F L E E F+ S + A+ + G VHA IK+ FVG
Sbjct: 203 GMHPAALWIFRSALEEAVEVNDFTVSCIVRVCATATLFDLGAQVHARSIKTALDASPFVG 262
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
++LV +Y+K G ++ A ++F+ +R++ WN++L AQHG F +M +G
Sbjct: 263 SSLVSLYSKCGLVDRAYRIFSAAPERNLGIWNAVLNASAQHGHTATAFERFMEMQNDGFR 322
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
PN +TFLC+LTACSHAGL+DEG+ YF+LMK++ +EP+ HY VDLLGR G + AL+
Sbjct: 323 PNYITFLCLLTACSHAGLVDEGKRYFSLMKEYTIEPQAEHYAAMVDLLGRVGRITEALEL 382
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I MP+EP +VWGALL ACRM K+ + A AA+R+F+ SG H+LL++ YA+AGR
Sbjct: 383 IESMPMEPPESVWGALLMACRMFKDADTAAIAAKRLFQTGSRSSGAHMLLSSTYAAAGRH 442
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
DAA ARK M+++GV+KE SW+E VH FV+N HP+ I+ ++ EK++
Sbjct: 443 VDAALARKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSDEIYNVLEKVGEKMEGA 502
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
GYV D+S V+ ++E+ L HSE+LA+ L+ P G I + KN+RVC DCH+A
Sbjct: 503 GYVADTSAVVKDVAREEKCETLGYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNAI 562
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ SK R +I+RD RFH F DG CSCGD+W
Sbjct: 563 KYLSKCTGRVVILRDNRRFHRFEDGLCSCGDFW 595
>gi|357115878|ref|XP_003559712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 650
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/561 (39%), Positives = 318/561 (56%), Gaps = 8/561 (1%)
Query: 14 VHAHILGSAFKND---IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+HA + F +D I + ILN YA C D AR++FD M + VTW ALI GY+Q
Sbjct: 90 LHAQAVVRGFLDDAGSIILPTAILNFYASCREPDLARRVFDAMACTNAVTWNALIKGYAQ 149
Query: 71 NDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASG---AGATDDKFGRQVHAFCLKYGYD 126
+ E A+ LF M R + P+++T ++L G G + G VH +K G +
Sbjct: 150 AGRREEALELFLAMRRQSHVAPDRYTFPALLSGIGREQGGGCMQELGGAVHGQAIKSGLN 209
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ +VG+SL+ MYA +D+ +F +++ + V W++LI+ + E E AL TF M
Sbjct: 210 RDPFVGASLVSMYAARGALDEVKVVFDDVDTLDPVVWSSLISAYVNCKEEEGALLTFYRM 269
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
L +P F YSS+F S LE G+ VHAH +KS A + N L+ MY+ G I
Sbjct: 270 LCRDIKPRQFVYSSMFAVCGSMSMLEMGRQVHAHSLKSNTDKDAAMTNALLTMYSDCGCI 329
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA +VFN DVVS+NS++ QHG K + +M G+ P+ VT L +L+A
Sbjct: 330 RDALRVFNSNDIVDVVSYNSIILALGQHGHPKEATELYRQMNCAGLMPDDVTLLNLLSAF 389
Query: 307 SHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+HAGL+ EG F +++ G++P HY D+L R+G + A+K I EMP E A +
Sbjct: 390 NHAGLVHEGLHIFNSMLDMEGIKPTYQHYACVADMLARSGQIGEAMKTIYEMPFEAEAPL 449
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W +LGAC H+++ G AE +FE++P+++ +ILL NIY GR +A + R MM++
Sbjct: 450 WRIILGACSKHRDIRTGTKIAEMLFEMEPYEATNYILLGNIYTRLGRWTEAEKVRNMMEK 509
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G+ ++ A SW+E H F +D +HP I++ + IK GYVPD S
Sbjct: 510 RGIDRDDAFSWIEISQRTHRFGVDDRSHPISREIYRNLDRLIGSIKVAGYVPDISFAAHN 569
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+ RE L H EKLA AF ++TP G T+ I KN+RVCGDCH A+K+ S + REII
Sbjct: 570 IKKDRREESLHYHCEKLAFAFGDLATPSGDTLRIMKNLRVCGDCHCAYKYFSLITGREII 629
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD +RFHHF G CSCGDYW
Sbjct: 630 LRDNHRFHHFNKGACSCGDYW 650
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R VHAH L S D AM N +L Y+ CGC+ +A ++F+ + D+V++
Sbjct: 288 CGSMSMLEMGRQVHAHSLKSNTDKDAAMTNALLTMYSDCGCIRDALRVFNSNDIVDVVSY 347
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVH 117
++I Q+ P+ A L+ QM GL P+ TL ++L A + AG + F +
Sbjct: 348 NSIILALGQHGHPKEATELYRQMNCAGLMPDDVTLLNLLSAFNHAGLVHEGLHIFNSMLD 407
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K Y V DM AR Q+ +A + + E +I G K
Sbjct: 408 MEGIKPTYQHYACVA----DMLARSGQIGEAMKTIYEMPFEAEAPLWRIILGACSKHRDI 463
Query: 178 KALRTFSEML--REGFEPTHFS-YSSVFTALASTGSLEQGKWVHAHVIKS 224
+ +EML E +E T++ +++T L G+W A +++
Sbjct: 464 RTGTKIAEMLFEMEPYEATNYILLGNIYTRL--------GRWTEAEKVRN 505
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/570 (37%), Positives = 345/570 (60%), Gaps = 7/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK L + VH + D ++ N ++ Y +CG + + K+F+ M D V+W
Sbjct: 491 CAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSW 550
Query: 62 TALISGYSQNDQPENAII-LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++ + + P + I+ +F+ M+R GL PN+ T ++L A + + G+QVHA
Sbjct: 551 NTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLE-LGKQVHAAV 609
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKA 179
+K+G + V ++L+ YA+ M LFT + + ++ +SWN++I+G+ ++A
Sbjct: 610 MKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEA 669
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M+ G ++S + A AS +LE+G +HA I+S + V + LVDM
Sbjct: 670 MDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDM 729
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G ++ A K+FN + +R+ SWNSM++G A+HGLG+ + FE+MLR+ +P+ VTF
Sbjct: 730 YSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTF 789
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ VL+ACSHAGL++ G YF +M HG+ P+ HY +DLLGRAG +D+ ++I+ MPI
Sbjct: 790 VSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPI 849
Query: 360 EPTAAVWGALLGACRMHK---NVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
EP A +W +L ACR K N++LG A+ + E++P + ++L +N +A+ G D
Sbjct: 850 EPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDT 909
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A+AR M+++ KKE SWV + VH F+A D +HP I++K + + I+ GYV
Sbjct: 910 AKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYV 969
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P + + L +++ +E L HSEKLA+AF L + G I I KN+RVCGDCH AF++
Sbjct: 970 PLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSGP-IRIMKNLRVCGDCHIAFRYI 1028
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S+++ R+II+RD+ RFHHF+DG CSCGDYW
Sbjct: 1029 SQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 13/377 (3%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKC--GCLDEARKLFDEMPVKDMVTWTAL 64
+L A VH + + + ++ + N +++ Y C G A+++FD P++D++TW AL
Sbjct: 182 RLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNAL 241
Query: 65 ISGYSQNDQPENAIILFSQMLR----LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+S Y++ + LF M R + L+P + T S++ A+ + QV +
Sbjct: 242 MSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWV 301
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK G ++YVGS+L+ +AR D+A +F +L+ KN V+ N LI G R+ E+A+
Sbjct: 302 LKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAV 361
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALA----STGSLEQGKWVHAHVIKSG-GQLVAFVGNT 235
+ F R + +Y + +ALA S L G+ VH H++++G L V N
Sbjct: 362 KIFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNG 420
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
LV+MYAK G+IE A K+F + D +SWN++++ Q+G + V + M ++ I+P+
Sbjct: 421 LVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPS 480
Query: 296 QVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+ L++C+ LL GQ K G++ + + V + G G + K
Sbjct: 481 NFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN 540
Query: 356 EMPIEPTAAVWGALLGA 372
M E W ++G
Sbjct: 541 SMA-EHDEVSWNTMMGV 556
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 183/369 (49%), Gaps = 8/369 (2%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+L S +D+ + + +++A+A+ G DEA+ +F + K+ VT LI G + D E A
Sbjct: 301 VLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEA 360
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDD---KFGRQVHAFCLKYGY-DWNVYVGS 133
+ +F R + N T +L A + + + GR VH L+ G D + V +
Sbjct: 361 VKIFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSN 419
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L++MYA+ ++ A +F +E+ + +SWN +I+ + E+A+ +S M + P
Sbjct: 420 GLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISP 479
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++F+ S ++ A L G+ VH +K G L V N LV MY + G++ D KVF
Sbjct: 480 SNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVF 539
Query: 254 NRLLKRDVVSWNSML--TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
N + + D VSWN+M+ +Q + + V+ F M+R G+ PN+VTF+ +L A S +
Sbjct: 540 NSMAEHDEVSWNTMMGVMASSQTPISE-IVKVFNNMMRGGLIPNKVTFINLLAALSPLSV 598
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L+ G+ A + KHGV + + ++G + M A W +++
Sbjct: 599 LELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMIS 658
Query: 372 ACRMHKNVE 380
+ N++
Sbjct: 659 GYIYNGNLQ 667
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 186/387 (48%), Gaps = 26/387 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H ++ +D+ + N ++N+YAK L A ++FDEMP ++ V+WT L+SGY +
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 74 PENAIILFSQMLR---LGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFCLKYGYDWNV 129
E A +F MLR G +P FT ++L+A G D F QVH K Y N
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 130 YVGSSLLDMYARFDQMDD--AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V ++L+ MY A +F ++ ++WNAL++ +A+K + F +M
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262
Query: 188 REG----FEPTHFSYSSVFTALASTGS----LEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
R PT ++ S+ TA + + L+Q V V+KSG +VG+ LV
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQ---VLVWVLKSGCSSDLYVGSALVSA 319
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
+A+ G ++A+ +F L +++ V+ N ++ G + + V+ F RN + N T+
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGT-RNTVDVNADTY 378
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGV-----EPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ +L+A + + +EG ++ H + + + A V++ + G ++ A K
Sbjct: 379 VVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF 438
Query: 355 REMPIEPTAAV-WGALLGACRMHKNVE 380
+ M E T + W ++ A + N E
Sbjct: 439 QLM--EATDRISWNTIISALDQNGNCE 463
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
++ + L G + +H +IK G F+ N LV+ YAK + A +VF+ +
Sbjct: 64 HADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP 123
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN---GIAPNQVTFLCVLTACSHAG 310
+R+ VSW +++G HG+ + R F MLR G P TF +L AC G
Sbjct: 124 ERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG 179
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 326/545 (59%), Gaps = 17/545 (3%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ N +L Y + L AR LF+ MP +D+V+W A++SGY+QN + A +F +
Sbjct: 23 ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYK 82
Query: 84 M-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
M L+ G+ N + V G +D + DW + + L+ + R
Sbjct: 83 MPLKNGISWNGLLAAYVQN----GRIEDA------KRLFESKMDWTLVSWNCLMGGFVRK 132
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+ LF + ++ +SW+A+IAG+++ E+AL F EM R+ S++
Sbjct: 133 RRN-----LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCAL 187
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ ++ +LE G+ +H ++K+G Q +VGN L+ MY K GSI++A F +L++DVV
Sbjct: 188 STCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVV 247
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
SWN+M+ G A+HG G+ + FE M GI P+ T + VL ACSHAGL+D+G YF M
Sbjct: 248 SWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSM 307
Query: 323 KK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+ +G+ + HY VDLLGRAG L+ A ++ MP EP AA WGALLGA R+H N EL
Sbjct: 308 NRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTEL 367
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
G AA+ IFE++PH+SG +ILL+ +YA++GR +DA + R M+ GVKK P SW+E +N
Sbjct: 368 GEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQN 427
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+H F D +HP I+ E+ K+KQ GY+ ++ V +++E+ L+ HSEK
Sbjct: 428 KIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEK 487
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+A+ ++ P G I + KN+RVC DCH+A K+ SK+V R II+RD +RFH+F G CS
Sbjct: 488 LAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCS 547
Query: 562 CGDYW 566
C D+W
Sbjct: 548 CRDFW 552
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+++ L+ R +H ++ + ++ + N +L Y KCG +DEAR F E+ KD+V+W
Sbjct: 190 CSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSW 249
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I GY+++ E A+ +F M G++P+ T+ SVL A D+ ++
Sbjct: 250 NTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNR 309
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
YG + + ++D+ R Q+++A L + + +W AL+ H GE
Sbjct: 310 DYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 369
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
KA + EM EP ++S L S G+W A
Sbjct: 370 KAAQIIFEM-----EP----HNSGMYILLSKLYAASGRWSDA 402
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/569 (38%), Positives = 332/569 (58%), Gaps = 24/569 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN--AYAKCGCLDEARKLFDEMPVKDM 58
+C+++++L++ +H +L + D + +L A G L AR +FD + +
Sbjct: 27 RCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W +I GYS + +PE A++L+ ML + N +T +LKA + + ++ +Q+HA
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEE-TQQIHA 142
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G+ +Y +SLL++Y++ + A LF ++ ++ +
Sbjct: 143 HIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------E 185
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL F M G + + + S A A G L+QGKW+HA++ K ++ +G L+D
Sbjct: 186 ALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLID 245
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G +E+A +VF ++ ++ V W +M++G A HG G+ + WF KM G+ PNQ+T
Sbjct: 246 MYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMT 305
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F +LTACSHAGL+ E + F M++ HG +P HY VDLLGRAGLL A + I M
Sbjct: 306 FTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM 365
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P++P AA+WGALL AC +H N+ELG + + ++DP G +I LA+I+A+AG N AA
Sbjct: 366 PVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAA 425
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R R+ MKE GV K P CS + H F+A D++HPQ I +I E++++ GY P
Sbjct: 426 RVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 485
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
+L + +E+E + HSEKLA+ F LIST PG TI I KN+RVC DCH+ K S
Sbjct: 486 KLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLIS 545
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KV REI++RD RFH F+DG C+CGDYW
Sbjct: 546 KVYAREILMRDRTRFHLFKDGNCTCGDYW 574
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 346/592 (58%), Gaps = 32/592 (5%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K + + +HA ++ + D M +L + +KC +D A ++F ++ +TALI
Sbjct: 60 KHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALI 119
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G+ + +AI L+S+ML + P+ + ++S+LKA G+ + GR+VH+ LK G
Sbjct: 120 DGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALRE-GREVHSRALKLGL 178
Query: 126 DWNVYVGSSLLDMYAR----------FDQM--------------------DDAWFLFTAL 155
N V ++++Y + F++M ++A +F+ +
Sbjct: 179 SSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRV 238
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
K+ V W A+I G R E +AL F M E P F+ V +A + G+LE G+
Sbjct: 239 RRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR 298
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
WVH+++ K +L FVGN L++MY++ GSI++A+ VF+ + RDV+++N+M++G + +G
Sbjct: 299 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 358
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHY 334
+ + F M+ + P VTF+ VL ACSH GL+D G F ++ + +GVEP+ HY
Sbjct: 359 KSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHY 418
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
VDLLGR G L+ A IR M + P + G LL AC+MHKN+ELG A+ + +
Sbjct: 419 GCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQ 478
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHP 454
DSG ++LL+++YAS+G+ +AA+ R MKE+G++KEP CS +E N +H F+ D HP
Sbjct: 479 ADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 538
Query: 455 QRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPG 514
++ I++K E++ ++ GY P+ VL + E+E L +HSE+LA+ + LIST P
Sbjct: 539 RKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPC 598
Query: 515 STIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ I + KN+RVC DCHSA K +K+ R+++VRD NRFH+F +G CSCGDYW
Sbjct: 599 TVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 174/365 (47%), Gaps = 42/365 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP------- 54
C L+E R VH+ L ++ ++ I+ Y KCG L +AR++F+EMP
Sbjct: 157 CGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAST 216
Query: 55 -----------------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKP 91
KD V WTA+I G+ +N++ A+ F M ++P
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 276
Query: 92 NQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+FT+ VL A S GA + GR VH++ K+ + N++VG++L++MY+R +D+A
Sbjct: 277 NEFTIVCVLSACSQLGALE--IGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 334
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F ++ ++ +++N +I+G + + +A+ F M+ PT+ ++ V A + G
Sbjct: 335 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGL 394
Query: 211 LEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSML 268
++ G K H+ G + +VD+ + G +E+A + + + D + ++L
Sbjct: 395 VDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 454
Query: 269 TGCAQHG---LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+ C H LG+ K+L + + T++ + + +G E A MK+
Sbjct: 455 SACKMHKNLELGEQVA----KVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEA 510
Query: 326 GVEPE 330
G++ E
Sbjct: 511 GMQKE 515
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ + L + + Q +HA +I++G F+ L+ +K +I+ A ++F +
Sbjct: 52 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
V + +++ G G ++ + +ML + I P+ +L AC L EG+ +
Sbjct: 112 VYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHS 171
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
K G+ + ++L G+ G L A + EMP + A+
Sbjct: 172 RALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAST 216
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/490 (40%), Positives = 312/490 (63%), Gaps = 4/490 (0%)
Query: 80 LFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMY 139
+S MLR + P++ + S +L+ S A + + + G H +K G+++++ + + LLD Y
Sbjct: 17 FYSGMLRNDVLPSKTSFSLILR-SCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFY 75
Query: 140 ARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
A+ +++A LF + +N V+WN +I+ + + E A+ F +M E +PT +
Sbjct: 76 AKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVT 135
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
S+ +A A G+L+ G+W+H ++ ++ +GN L+DMY K G++E A VF+ L
Sbjct: 136 MVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS 195
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
++++ WNS++ G +G G+ + F M + GI P+ VTF+ +L+ CSH+GLL GQ
Sbjct: 196 RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR 255
Query: 318 YFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
YF+ ++ +G+EP HY VDLLGRAG L AL+ IR MP++P + V G+LL AC++H
Sbjct: 256 YFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIH 315
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
K+ +LG +++ ELDP D G ++ L+N+YAS R +D RK+M + GV K P CS
Sbjct: 316 KDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSS 375
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
+E N VH FVA D +HPQ I+ EI++++K G+VP++++VL +++E+E ++
Sbjct: 376 IEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIR 435
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFR 556
HSE++A+AF L+STPPG TI + KN+R C DCHSA K S +REIIVRD RFHHFR
Sbjct: 436 YHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFR 495
Query: 557 DGFCSCGDYW 566
+G CSC DYW
Sbjct: 496 NGSCSCNDYW 505
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 136/266 (51%), Gaps = 9/266 (3%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK--DMVTWTALISGYSQND 72
H I+ F+ D+ +Q +L+ YAK G ++EAR LFD M + + VTW +IS Y Q
Sbjct: 53 HCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCG 112
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYV 131
+ AI +F QM +KP + T+ S+L A GA D G +H + +V +
Sbjct: 113 EFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALD--MGEWIHGYIRTKRLKIDVVL 170
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G++L+DMY + ++ A +F L KN WN++I G GE+A+ F M +EG
Sbjct: 171 GNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGI 230
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDA 249
+P ++ + + + +G L G+ + ++ G V G +VD+ ++G +++A
Sbjct: 231 KPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYG-CMVDLLGRAGYLKEA 289
Query: 250 EKVFNRL-LKRDVVSWNSMLTGCAQH 274
++ + +K + + S+L C H
Sbjct: 290 LELIRAMPMKPNSMVLGSLLRACQIH 315
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L +H +I K D+ + N +++ Y KCG L+ A +F + K++ W
Sbjct: 143 CAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 202
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G N + E AI F M + G+KP+ T +L R
Sbjct: 203 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLG 262
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
YG + V ++D+ R + +A L A+ K N + +L+ H GE
Sbjct: 263 VYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGE 322
Query: 178 KALRTFSEM 186
+ + E+
Sbjct: 323 QVTQQLLEL 331
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 326/576 (56%), Gaps = 13/576 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC-----LDEARKLFDEMPVK 56
CT L+ L + V A G + A +L + G L AR++FD +P
Sbjct: 38 CTSLRALAQLHAV-AVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHP 96
Query: 57 DMVTWTALI-----SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK 111
V W + G E A +F +M+ G+ P+ +T S+LKA A A +
Sbjct: 97 GDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKAC-ASARAGE 155
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
GRQ H +K G + YV +L++MYA + A +F ++ + VS+NA+I
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASV 215
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
R S +AL F EM +G +PT + SV +A A G+LE G+W+H ++ K +
Sbjct: 216 RSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVK 275
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
V L+DMYAK GS+EDA VF + RD +W+ M+ A HG G+ + FE+M + G
Sbjct: 276 VNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQG 335
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P+ VTFL VL ACSH+G++ EG YF M+++G+ HY DLL R+G L+RA
Sbjct: 336 MKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAY 395
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
KFI E+PI+PTA +W LL AC H +V++G ERI ELD G +++ +N+ A+ G
Sbjct: 396 KFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTG 455
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
R + RK+M E GV K P CS +E N VH F A D +HP + E+ E++K
Sbjct: 456 RWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLK 515
Query: 472 QIGYVPDSSHVLSY-ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCH 530
+GYVP++SHV ++E+ L+ HSEKLA++F L++T PG+T+ I KN+RVC DCH
Sbjct: 516 LVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCH 575
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S K S V R II+RD NRFHHF DG CSCGDYW
Sbjct: 576 SMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 51/261 (19%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQL---VAFVGNTLVDMYAKSGS-----IEDAEKVFNRL 256
L SL +HA +K+GG L AFV L+ + + G+ + A +VF+R+
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFV-TRLLTLCTEQGAEAPAHLAYARQVFDRI 93
Query: 257 L-KRDVVSWNSMLTGCAQHGLGKATVRW----FEKMLRNGIAPNQVTFLCVLTACSHAGL 311
DV+ +N++L G A+ G G F +M+ G+AP+ TF+ +L AC+ A
Sbjct: 94 PHPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARA 153
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG-------LLDR--------------- 349
+EG+ + K G E T +++ G + DR
Sbjct: 154 GEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITA 213
Query: 350 ---------ALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
AL REM ++PT+ ++L AC + +ELG + + I ++ DS
Sbjct: 214 SVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR-LDS 272
Query: 398 GPHI--LLANIYASAGRLNDA 416
+ L ++YA G L DA
Sbjct: 273 LVKVNTALIDMYAKCGSLEDA 293
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 327/544 (60%), Gaps = 13/544 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ +L+ Y + G + EAR LFDEMP +++V+WTA+ISGY+QN + A LF M
Sbjct: 173 DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP 232
Query: 86 RLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQ 144
+ N+ + +++L AG +D A + V ++++ + +
Sbjct: 233 ----ERNEVSWTAMLVGYIQAGHVEDA------AELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
+D A +F + +++ +W+A+I + + +AL TF EML G P + S S+ T
Sbjct: 283 VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A+ L+ G+ VHA +++ + F + L+ MY K G+++ A++VF+ +D+V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK- 323
NSM+TG AQHGLG+ + F M G++P+ +T++ LTACS+ G + EG+ F M
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+ P HY VDLLGR+GL++ A I+ MP+EP A +WGAL+GACRMH+N E+
Sbjct: 463 NSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAE 522
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
AA+++ EL+P ++GP++LL++IY S GR DA++ RK + + K P CSW+E V
Sbjct: 523 VAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRV 582
Query: 444 HMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
H+F + D AHP+ A I + ++ + + GY D S VL D++++ L+ HSE+
Sbjct: 583 HLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQ 642
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+A+ L+ P G I + KN+RVCGDCHSA K +K+ REI++RD NRFHHF+DGFCSC
Sbjct: 643 AVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSC 702
Query: 563 GDYW 566
DYW
Sbjct: 703 RDYW 706
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 146/261 (55%), Gaps = 3/261 (1%)
Query: 16 AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPE 75
A + + ++ +A N ++ + + G +D A+ +F++M +D TW+A+I Y QN+
Sbjct: 256 AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLM 315
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSL 135
A+ F +ML G++PN ++ S+L A A D +GR+VHA L+ +D +V+ S+L
Sbjct: 316 EALSTFREMLWRGVRPNYPSVISILTVCAALAVLD-YGREVHAAMLRCSFDMDVFAVSAL 374
Query: 136 LDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTH 195
+ MY + +D A +F E K+ V WN++I G+A+ GE+AL F +M G P
Sbjct: 375 ITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 196 FSYSSVFTALASTGSLEQGKWV-HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA-EKVF 253
+Y TA + TG +++G+ + ++ + S + A + +VD+ +SG +E+A + +
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 254 NRLLKRDVVSWNSMLTGCAQH 274
N ++ D V W +++ C H
Sbjct: 495 NMPVEPDAVIWGALMGACRMH 515
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 170/422 (40%), Gaps = 68/422 (16%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N + A+ G ++ AR F+ MP++ ++ AL++GY +N P+ A+ LF +M L
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 91 PNQFTLSSV------LKASGAGATDDKFGRQVHAFC-LKYGY------------------ 125
+S + L + A F V +F L GY
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 126 ------------------------------DWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
D +V +++L Y + ++ +A LF +
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+N VSW A+I+G+A+ E A + F M E S++++ G +E
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDA- 255
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
A + + + N ++ + + G ++ A+ VF ++ +RD +W++M+ Q+
Sbjct: 256 ---AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNE 312
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ F +ML G+ PN + + +LT C+ +LD G+ A M + + +
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGALLGACRMHKNVE--LGAYAAERIFEL 392
+ + + G LD+A + EP V W +++ H E LG + R+ +
Sbjct: 373 ALITMYIKCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430
Query: 393 DP 394
P
Sbjct: 431 SP 432
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 17/228 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R VHA +L +F D+ + ++ Y KCG LD+A+++F KD+V W
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMW 402
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQV-HAF 119
++I+GY+Q+ E A+ +F M G+ P+ T L A S G K GR++ ++
Sbjct: 403 NSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV--KEGREIFNSM 460
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSE 175
+ S ++D+ R +++A+ L + + V W AL+ H
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEI 520
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
E A + E L G + S ++T++ G+W A ++
Sbjct: 521 AEVAAKKLLE-LEPGNAGPYVLLSHIYTSV--------GRWEDASKMR 559
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 47/226 (20%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N + A++G+IE A F + R S+N++L G ++ L A + F +M +A
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 294 -----------------------------PNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
P+ V+F +L GLL + F M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-- 138
Query: 325 HGVEPEEAHYVTFVDLLG---RAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVE 380
PE H V++ LLG AG ++ A + EMP A W A+L G C+ + E
Sbjct: 139 ----PERNH-VSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVA-WTAMLSGYCQAGRITE 192
Query: 381 LGAYAAERIF-ELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
A +F E+ + + + YA G +N A + ++M E
Sbjct: 193 -----ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPE 233
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/571 (38%), Positives = 350/571 (61%), Gaps = 9/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H L D+++ N +L Y +CG + E +K F M D V+W
Sbjct: 500 CASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSW 559
Query: 62 TALISGYSQNDQPE--NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+LI G + +P A+ F M+R G PN+ T ++L A + + + G+Q+HA
Sbjct: 560 NSLI-GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHE-LGKQIHAL 617
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEK 178
LK + + ++LL Y + M +F+ + + ++EVSWN++I+G+ K
Sbjct: 618 VLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPK 677
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A+ M+++G F++++V +A A+ +LE+G VH +++ + +G+ LVD
Sbjct: 678 AMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVD 737
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G I+ A + F + R++ SWNSM++G A+HG G ++ F +M G P+ VT
Sbjct: 738 MYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVT 797
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ VL+ACSHAGL++EG +F M + +G+ P H+ VDLLGR G L++ F+ +M
Sbjct: 798 FVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQM 857
Query: 358 PIEPTAAVWGALLGA-CRMH-KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
P++P +W +LGA CR + +N LG AAE + E++P ++ +ILL+N+YAS G+ +D
Sbjct: 858 PVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDD 917
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A+ R M+++ VKKE CSWV K+ VH+FVA D +HP++ +I++K +E++ K++ GY
Sbjct: 918 VAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGY 977
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
+P++ L + + +E L HSEK+A+AF L + P I I KN+RVCGDCHSAFK+
Sbjct: 978 IPETRFALYDLEGESKEELLSYHSEKIAVAFVL-TRPSKMPIRILKNLRVCGDCHSAFKY 1036
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++VER+I++RD+NRFHHF +G CSCGD+W
Sbjct: 1037 ISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 177/319 (55%), Gaps = 15/319 (4%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K+A +H + + F ND+ + NT++N YA+ G L RK+FDEMP++++V+W+ LISGY
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDW 127
++N P A LF +M+ G PN + SV++A G KFG Q+H K Y
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209
Query: 128 NVYVGSSLLDMYAR-FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V + L+ MY +D A F ++ +N VS N++I+ + ++ + A FS M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269
Query: 187 LRE----GFEPTHFSYSSVFTA---LASTG--SLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+E G +P +++ S+ +A LA++G LEQ + V KSG +VG+ LV
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQ---LLTRVEKSGFLHDLYVGSALV 326
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+AK+GSI A+ +F ++ R+VVS N ++ G + G+ V F +M ++ + N
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPN 385
Query: 298 TFLCVLTACSHAGLLDEGQ 316
+++ +LTA +L+ G+
Sbjct: 386 SYMIILTAFPEFHVLENGK 404
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 181/354 (51%), Gaps = 4/354 (1%)
Query: 21 SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIIL 80
S F +D+ + + +++ +AK G + A+ +F +M +++V+ LI G + + E A+ L
Sbjct: 313 SGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVEL 372
Query: 81 FSQML-RLGLKPNQFTLS-SVLKASGAGATDDKFGRQVHAFCLKYGY-DWNVYVGSSLLD 137
F +M + L PN + + + + G +VHAF ++ G + + +G+ L++
Sbjct: 373 FMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLIN 432
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MYA+ ++DA +F +++K+ V+WN++I G + + +A++TF EM R P++F+
Sbjct: 433 MYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFT 492
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
S ++ AS G + G+ +H +K G L V N L+ +Y + G +++ +K F+ +L
Sbjct: 493 MISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552
Query: 258 KRDVVSWNSMLTGCAQHGLGK-ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D VSWNS++ A V F M+R G PN+VTF+ +L A S L + G+
Sbjct: 553 DYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGK 612
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
AL+ K V + A + G+ G + M W +++
Sbjct: 613 QIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMI 666
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/613 (37%), Positives = 347/613 (56%), Gaps = 51/613 (8%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KD 57
C L +HA I+ G A + + N +L YA CGC +ARK+FDE+P KD
Sbjct: 23 CARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKD 82
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
V WT L+ + +++ + A+++F +M R G+KP++ TL + A D G Q H
Sbjct: 83 TVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGC-ARLGDVVVGAQGH 141
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDA--------------W-------------- 149
+K G ++++DMYA+ M +A W
Sbjct: 142 GCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVR 201
Query: 150 ---FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTAL 205
+F + +NEV+W +IAG+ +++ EM+ + E + + S+ TA
Sbjct: 202 NGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTAC 261
Query: 206 ASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ +G L G+WVHA+ +K+ +L VG +VDMYAK G I A K F ++ +R+VVSW
Sbjct: 262 SQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSW 321
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA-LMK 323
N+ML+G A HGLG+A + F +M + P+ VTF VL+ACSH+GL+D+G YF L
Sbjct: 322 NAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGNLES 380
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
+G+ P+ HY VDLLGRAG L+ A +REMPI P V G+LLG+C +H ++LG
Sbjct: 381 VYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGE 440
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
+ + + +LDP ++ HILL+N+YA AG+ N A R+++K+ G+KK P S + V
Sbjct: 441 HLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQV 500
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA----------DQQEREA 493
H F A D +HP+ ++ E+ +++ GY P+++ + ++A +Q+E+E
Sbjct: 501 HQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTA-LQTFAGCDSLEDDLVEQEEKEQ 559
Query: 494 KLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFH 553
L HSEKLA+ F LIST PG +HI KN+R+C DCHSA K SK+ REI++RD NRFH
Sbjct: 560 ALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFH 619
Query: 554 HFRDGFCSCGDYW 566
F++G CSC DYW
Sbjct: 620 CFKEGSCSCCDYW 632
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/601 (39%), Positives = 333/601 (55%), Gaps = 47/601 (7%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
+ A +HA + + D A+ + AYA G LD A L P V +T+ I +
Sbjct: 44 RRASELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAH 103
Query: 69 SQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
S A+ L S+M L GL P TLS+ L A G A GR +H + +K
Sbjct: 104 SSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACGGLAV----GRALHGYAVKLALSG 159
Query: 128 NVYVGSSLLDM--------------------------------YARFDQMDDAWFLFTAL 155
YV ++LL M YA+ +DDA LF L
Sbjct: 160 EPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGL 219
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
SK+ + WNA++ G+ + +ALR F MLR G EP S +A+A G+ E G+
Sbjct: 220 PSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGR 279
Query: 216 WVHAHVIKSGGQLV---AFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSMLTG 270
W+H+ V S + V A VG L+DMY K GS+EDA VF L RD+V+WN+M+ G
Sbjct: 280 WLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNG 339
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEP 329
A HG + + F ++ G+ P +TF+ VL ACSH+GL+DEG+ F ++ +++G+EP
Sbjct: 340 YAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEP 399
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMP-IEPTAAVWGALLGACRMHKNVELGAYAAER 388
+ HY VDLLGRAG ++ A + ++ M +P A +W +LL ACR+HKN+ELG A+
Sbjct: 400 KVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADH 459
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
+ +SG ++LL+N+YA+AG + R R MM+ SG++KEP CS VE V FVA
Sbjct: 460 LVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVA 519
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAK---LQVHSEKLALA 505
D +HP+ A I+ K E++ + G+VP + VL D + AK L VHSEKLALA
Sbjct: 520 GDRSHPRAAEIYAKLEEVNGMARARGHVPRTELVLHDLDDDDTAAKEQALAVHSEKLALA 579
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F LISTPPG+ I I KN+R C DCH+ K S+V R+I+ RD NRFHHF DG C+CGDY
Sbjct: 580 FGLISTPPGTAIKIVKNLRACADCHAVLKLVSEVTGRKIVFRDRNRFHHFVDGSCTCGDY 639
Query: 566 W 566
W
Sbjct: 640 W 640
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 105 AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWN 164
AG + ++HA ++ G D + V L YA ++D A L V +
Sbjct: 38 AGCASARRASELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVFYT 97
Query: 165 ALIAGHARKSEGEKALRTFSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+ I H+ + AL SEM L G PT + S+ +L + G L G+ +H + +K
Sbjct: 98 SAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSA---SLPACGGLAVGRALHGYAVK 154
Query: 224 SGGQLVAFVGNTLVDM--------------------------------YAKSGSIEDAEK 251
+V L+ M YAK G ++DA
Sbjct: 155 LALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARS 214
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+ L +D++ WN+M+ G QHG +R F +MLR+G+ P++V+ + L+A + G
Sbjct: 215 LFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGT 274
Query: 312 LDEGQ 316
+ G+
Sbjct: 275 AESGR 279
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 327/566 (57%), Gaps = 37/566 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + R VH I+ S F ++ +Q+ +++ YAKCG L AR + D M + D+V W
Sbjct: 246 CTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCW 305
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G + E A++LF +M ++ + FT SVLK S A + K G VH+ +
Sbjct: 306 NSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLK-SLASCKNLKIGESVHSLTI 364
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D V ++L+DMYA+ + A +F + K+ +SW +L+ G+ EKAL+
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQ 424
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + F + VF+A A +E G+ VHA+ IKS + N+L+ MYA
Sbjct: 425 LFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYA 484
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +EDA +VF+ + R+V+SW +++ G AQ+GL
Sbjct: 485 KCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGL------------------------- 519
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ GQ YF M+K +G++P HY +DLLGRAG ++ A + M +E
Sbjct: 520 ----------VETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVE 569
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W +LL ACR+H N+ELG A + + +L+P +S P++LL+N+++ AGR DAA R
Sbjct: 570 PDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIR 629
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MK G+ KEP SW+E K+ VH F++ D +HP A I+ K E+ IK+ G+VPD +
Sbjct: 630 RAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMN 689
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D++ +E L HSEKLA+AF L++ G+ I I KN+RVCGDCHSA K+ S +
Sbjct: 690 FALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIF 749
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R II+RD N FHHF +G CSCGD+W
Sbjct: 750 KRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 234/488 (47%), Gaps = 24/488 (4%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++AYA G L EARKLF+E P+K+ +TW++L+SGY +N + FSQM G K
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQK 131
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+Q+TL SVL+A + G+ +H + +K + N++V + L+DMY++ + +A +
Sbjct: 132 PSQYTLGSVLRACSTLSLLHT-GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190
Query: 151 LFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF +L + KN V W A++ G+A+ E KA++ F EM +G E HF++ S+ TA S
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSIS 250
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ G+ VH +I SG +V + LVDMYAK G + A + + + DVV WNSM+
Sbjct: 251 AYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIV 310
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
GC HG + + F KM I + T+ VL + + L G+ +L K G +
Sbjct: 311 GCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA 370
Query: 330 EEAHYVTFVDLLGRAGLLDRAL----KFIREMPIEPTAAVWG---------ALLGACRMH 376
+ VD+ + G L AL K + + I T+ V G AL C M
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMR 430
Query: 377 K-NVELGAYAAERIF----ELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
V+L + +F EL + G + I +SAG L A + M E
Sbjct: 431 TARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490
Query: 432 PAC---SWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
A +ET+N + + A + Q ++ K G P S H D
Sbjct: 491 DAIRVFDSMETRNVIS-WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDL 549
Query: 489 QEREAKLQ 496
R K+
Sbjct: 550 LGRAGKIN 557
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
Y WN+ + + YA + +A LF KN ++W++L++G+ + + LR FS
Sbjct: 69 YTWNIMISA-----YANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFS 123
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M +G +P+ ++ SV A ++ L GK +H + IK + FV LVDMY+K
Sbjct: 124 QMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCK 183
Query: 245 SIEDAEKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
+ +AE +F L R + V W +MLTG AQ+G ++ F++M G+ N TF +L
Sbjct: 184 CLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSIL 243
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
TAC+ G+ + G P VD+ + G L A + M I+
Sbjct: 244 TACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVV 303
Query: 364 AVWGALLGACRMHKNVE 380
W +++ C H +E
Sbjct: 304 C-WNSMIVGCVTHGYME 319
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/522 (42%), Positives = 311/522 (59%), Gaps = 37/522 (7%)
Query: 81 FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
+++M LGL + FTL VLK S A + GR VH L+ G + + YVG+SL+DMY
Sbjct: 95 YARMHFLGLLGDNFTLPFVLK-SCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYV 153
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE------------------------- 175
+ + DA LF + ++ SWNALIAG+ ++ E
Sbjct: 154 KCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISG 213
Query: 176 ------GEKALRTFSEMLREGFE--PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
E+AL F EML++G E P + SV A A + +LE+G+ +H G
Sbjct: 214 YTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH 273
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFE 285
L + V L MYAK S+ +A F+ + + +++++WN+M+T A HG G V FE
Sbjct: 274 LNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFE 333
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRA 344
MLR G+ P+ VTF+ +L+ CSH+GL+D G +F M H VEP HY VDLLGRA
Sbjct: 334 NMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRA 393
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
G L A + I +MP++ +VWGALL ACR H+N+E+ AA R+F L+P +SG ++LL+
Sbjct: 394 GRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLS 453
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
N+YA AG + + R ++K G+KK P CSW+E H+F+ D +HPQ I+K
Sbjct: 454 NLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLE 513
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
+ EKIK GY+PD+S VL ++E+E L HSEKLA+AF L++T PG + + KN+R
Sbjct: 514 ALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLR 573
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+CGDCH+A KF SK+ EREIIVRD NRFH F+DG CSCGDYW
Sbjct: 574 ICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 46/314 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM--- 58
C L ++ R VH L + D + ++++ Y KCG + +ARKLFD+M V+DM
Sbjct: 117 CADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASW 176
Query: 59 ----------------------------VTWTALISGYSQNDQPENAIILFSQMLRLG-- 88
V+WTA+ISGY+QN E A+ LF +ML+ G
Sbjct: 177 NALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE 236
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+KPN T+ SVL A A ++ GR++H F G N V ++L MYA+ + +A
Sbjct: 237 MKPNWVTIVSVLPACAQSAALER-GRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEA 295
Query: 149 --WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
F A KN ++WN +I +A G +A+ F MLR G +P ++ + + +
Sbjct: 296 RCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCS 355
Query: 207 STGSLEQG-----KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRD 260
+G ++ G H ++ + A V VD+ ++G + +A+++ +++ ++
Sbjct: 356 HSGLIDAGLNHFNDMGTIHSVEPRVEHYACV----VDLLGRAGRLVEAKELISQMPMQAG 411
Query: 261 VVSWNSMLTGCAQH 274
W ++L C H
Sbjct: 412 PSVWGALLAACRSH 425
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 33/170 (19%)
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L ++ M G +F+ V + A + G+ VH ++ G + +VG +L+DM
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 240 YAKSGSIEDAEKVFNRLLKRD-------------------------------VVSWNSML 268
Y K G I DA K+F++++ RD +VSW +M+
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 269 TGCAQHGLGKATVRWFEKMLRNG--IAPNQVTFLCVLTACSHAGLLDEGQ 316
+G Q+G + + F++ML++G + PN VT + VL AC+ + L+ G+
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGR 261
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/565 (37%), Positives = 329/565 (58%), Gaps = 14/565 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L R +HAH++ + ++ +++ I+N Y KCG L A+++FD+M VK V WT L+
Sbjct: 196 RALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLM 255
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GY+Q + +A+ LF ++ G++ + F S VLKA A + +FG+Q+HA K G
Sbjct: 256 VGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKAC-ASLEELRFGKQIHACVAKLGL 314
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ V VG+ L+D Y + + A F + N+VSW+A+I+G+ + S+ E+A++TF
Sbjct: 315 ECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 374
Query: 186 ML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+ + F+Y+S+F A + G VHA IK + + L+ MY+K G
Sbjct: 375 LRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 434
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++DA +VF + D+V+W + ++G A +G +R FEKM+ G+ PN VTF+ VLT
Sbjct: 435 CLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 494
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSHAGL+++G+ Y +++K+ V P HY +D+ R+GLLD AL+F++ MP EP A
Sbjct: 495 ACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDA 554
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
W L C HKN+ELG A E + +LDP D+ ++L N+Y AG+ +AA K+M
Sbjct: 555 MSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLM 614
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
E +KKE +CSW++ K +H F+ D HPQ I++K +E G++ +
Sbjct: 615 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFD------GFMEGD---M 665
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK--KNIRVCGDCHSAFKFASKVVE 541
ER +L HSE+LA+AF LIS + IK KN+R C DCH K S V
Sbjct: 666 FQCSMTERREQLLDHSERLAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTG 725
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
EI++RD+ RFHHF++G CSC DYW
Sbjct: 726 HEIVIRDSRRFHHFKEGKCSCNDYW 750
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 212/465 (45%), Gaps = 50/465 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L R++H + + +QN +L Y +CG L++A KLFDEM + V+
Sbjct: 91 CRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSR 150
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +IS Y++ + A+ LFS+ML G KP +++LK+ D GRQ+HA +
Sbjct: 151 TTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALD-IGRQIHAHVI 209
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N + + +++MY + + A +F + K V+W L+ G+ + AL+
Sbjct: 210 RAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALK 269
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +++ EG E F +S V A AS L GK +HA V K G + VG LVD Y
Sbjct: 270 LFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYI 329
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFL 300
K S E A + F + + + VSW+++++G Q + V+ F+ + +N + N T+
Sbjct: 330 KCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYT 389
Query: 301 CVLTACS-----------HA------------------------GLLDEGQGYFALMKKH 325
+ ACS HA G LD+ F M
Sbjct: 390 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDN- 448
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELG 382
P+ + F+ G AL+ +M ++P + + A+L AC VE G
Sbjct: 449 ---PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 505
Query: 383 AYAAERIFELDPHDSGPHI----LLANIYASAGRLNDAARARKMM 423
+ + + L ++ P I + +IYA +G L++A R K M
Sbjct: 506 KHYLDTM--LRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNM 548
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%)
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+A F EM + G + +SY +F A SL G+ +H + + N ++
Sbjct: 64 EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVL 123
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY + GS+EDA+K+F+ + + VS +M++ A+ GL V F +ML +G P
Sbjct: 124 QMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSS 183
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ +L + + LD G+ A + + G+ + V++ + G L A + +M
Sbjct: 184 MYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQM 243
Query: 358 PIEPTAAVWGALLG 371
++ A G ++G
Sbjct: 244 AVKKPVAWTGLMVG 257
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/566 (36%), Positives = 331/566 (58%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++ +++E + H L + ++NT++ Y+ C EA ++ D++P D+ +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ +SGY + + + + + N T S L+ + D QVH+ +
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF-SNLRDLNLALQVHSRMV 264
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
++G++ V +L++MY + ++ A +F ++N ++ + + E+AL
Sbjct: 265 RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALN 324
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M + P ++++ + ++A L+QG +H V+KSG + VGN LV+MYA
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGSIEDA K F+ + RD+V+WN+M++GC+ HGLG+ + F++M+ G PN++TF+
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH G +++G YF LMKK V+P+ HY V LL +AG+ A F+R PIE
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
W LL AC + +N LG AE E P+DSG ++LL+NI+A + A+ R
Sbjct: 505 WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVR 564
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M GVKKEP SW+ +N H+F+A D+ HP+ +I+ K +E+ KIK +GY PD +
Sbjct: 565 SLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVA 624
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
D+++RE L HSEKLA+A+ LI TP S +++ KN+R+C DCHSA K SK+
Sbjct: 625 GAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R I++RD+NRFHHF DG CSC DYW
Sbjct: 685 KRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 170/380 (44%), Gaps = 8/380 (2%)
Query: 2 CTHLKKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
C + L+ +HAH++ S+ D N+++N Y KC ARKLFD MP +++
Sbjct: 41 CANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNV 100
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
V+W A++ GY + + LF M G +PN+F + V K+ S +G ++ G+Q
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE--GKQF 158
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H LKYG + +V ++L+ MY+ +A + L + +++ ++G+
Sbjct: 159 HGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF 218
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++ L + E F + +Y S ++ L VH+ +++ G L
Sbjct: 219 KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGAL 278
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++MY K G + A++VF+ +++ +++ Q + + F KM + PN+
Sbjct: 279 INMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNE 338
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TF +L + + LL +G L+ K G V++ ++G ++ A K
Sbjct: 339 YTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 357 MPIEPTAAVWGALLGACRMH 376
M W ++ C H
Sbjct: 399 MTFRDIVT-WNTMISGCSHH 417
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/584 (36%), Positives = 342/584 (58%), Gaps = 32/584 (5%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA ++ + D M +L + +KC +D A ++F ++ +TALI G+ +
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
AI L+S+ML + P+ + ++S+LKA G+ + GR+VH+ LK G+ N V
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALRE-GREVHSRALKLGFSSNRLVRL 186
Query: 134 SLLDMYAR----------FDQM--------------------DDAWFLFTALESKNEVSW 163
++++Y + F++M ++A +F+ + K+ V W
Sbjct: 187 RIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCW 246
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
A+I G R E +AL F M E P F+ V +A + G+LE G+WVH+++ K
Sbjct: 247 TAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 306
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
+L FVGN L++MY++ GSI++A+ VF+ + RDV+++N+M++G + +G + +
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIEL 366
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLG 342
F M+ + P VTF+ VL ACSH GL+D G F ++ + + VEP+ HY VDLLG
Sbjct: 367 FRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLG 426
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
R G L+ A IR M + P + G LL AC+MHKN+ELG A+ + + DSG ++L
Sbjct: 427 RVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVL 486
Query: 403 LANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKK 462
L+++YAS+G+ +AA+ R MKE+G++KEP CS +E N +H F+ D HPQ+ I++K
Sbjct: 487 LSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEK 546
Query: 463 WREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKN 522
E++ ++ GY P+ VL + E+E L +HSE+LA+ + LIST P + I + KN
Sbjct: 547 LEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKN 606
Query: 523 IRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+RVC DCHSA K +K+ R+I+VRD NRFH+F +G CSCGDYW
Sbjct: 607 LRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 46/367 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP------- 54
C L+E R VH+ L F ++ ++ I+ Y KCG L +AR++F+EMP
Sbjct: 157 CGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAST 216
Query: 55 -----------------------VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKP 91
KD V WTA+I G+ +N++ A+ F M ++P
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRP 276
Query: 92 NQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+FT+ VL A S GA + GR VH++ K+ + N++VG++L++MY+R +D+A
Sbjct: 277 NEFTIVCVLSACSQLGALE--IGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQT 334
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F ++ ++ +++N +I+G + + +A+ F M+ PT+ ++ V A + G
Sbjct: 335 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGL 394
Query: 211 LEQGKWVH---AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNS 266
++ G + A + Q+ + +VD+ + G +E+A + + + D + +
Sbjct: 395 VDFGFEIFHSMARDYRVEPQIEHY--GCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 452
Query: 267 MLTGCAQHG---LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
+L+ C H LG+ + E G A + T++ + + +G E A MK
Sbjct: 453 LLSACKMHKNLELGEQVAKELED---RGQA-DSGTYVLLSHVYASSGKWKEAAQVRAKMK 508
Query: 324 KHGVEPE 330
+ G++ E
Sbjct: 509 EAGMQKE 515
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%)
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ + L + + Q +HA +I++G F+ L+ +K +I+ A ++F +
Sbjct: 52 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
V + +++ G G ++ + +ML I P+ +L AC L EG+ +
Sbjct: 112 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS 171
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
K G + ++L G+ G L A + EMP + A+
Sbjct: 172 RALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAST 216
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/562 (35%), Positives = 341/562 (60%), Gaps = 3/562 (0%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L+ + VHAHI+ S ++ +++ G + AR+LF +P D + +L+
Sbjct: 39 RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK 98
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
S+ + ++ + +ML G + +T +SV+KA A + + G+++H+ + GY
Sbjct: 99 VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKAC-ADLSALRLGKEIHSHVMVCGYG 157
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++YV ++L+ +YA+ M A +F A+ + ++WN+LI+G+ + ++++ F M
Sbjct: 158 SDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 217
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ GF+P + S+ ++ + G+L+ G W+H + +G L +G +L++MY + G++
Sbjct: 218 MESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNV 277
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A +VF+ + +R+VV+W +M++G HG G+ + F +M G PN +TF+ VL+AC
Sbjct: 278 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 337
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE-MPIEPTAA 364
+H+GL+D+G+ F+ MK+ +G+ P H V VD+ GRAGLL+ A +FI++ +P EP A
Sbjct: 338 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 397
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
VW ++LGACRMH+N +LG AE + ++P + G +++L+NIYA AGR++ R MM
Sbjct: 398 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMT 457
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
+KK+ S +E ++F D +HPQ I++ E+ + + GYVP ++
Sbjct: 458 RRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMH 517
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
+++ER+ L+ HSEKLALAF L+ T G TI I KN+R+C DCHSA K S + +REI
Sbjct: 518 DLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREI 577
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHF+DG CSC DYW
Sbjct: 578 IVRDKFRFHHFKDGSCSCLDYW 599
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 45/361 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +H+H++ + +D+ +Q ++ YAK + A+K+FD MP + ++ W
Sbjct: 135 CADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAW 194
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+LISGY QN P+ +I LF M+ G +P+ T+ S+L + S GA D FG +H +
Sbjct: 195 NSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALD--FGCWLHDYA 252
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G+D NV +G+SL++MY R + A +F +++ +N V+W A+I+G+ G +A+
Sbjct: 253 DGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAM 312
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDM 239
F+EM G P + ++ +V +A A +G ++ G+ V + + ++ G + N +VDM
Sbjct: 313 ELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDM 372
Query: 240 YAKSGSIEDAEKVFNRLLKRD--VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+ ++G + DA + + + ++ W SML C H V+ E +L
Sbjct: 373 FGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVL--------- 423
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE-AHYVTFVDLLGRAGLLDRALKFIRE 356
VEPE HYV ++ AG +DR ++ +R
Sbjct: 424 ----------------------------SVEPENPGHYVMLSNIYALAGRMDR-VEMVRN 454
Query: 357 M 357
M
Sbjct: 455 M 455
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 197 SYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
S+S V AL +G L + VHAH+I SG + L+ + +GSI A ++F
Sbjct: 25 SHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPT 84
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D ++S+L ++ G TV ++ +ML +G + TF V+ AC+ L G
Sbjct: 85 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLG 144
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + + G + + L +A + A K MP + T W +L+
Sbjct: 145 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP-QRTIIAWNSLI 198
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/577 (38%), Positives = 334/577 (57%), Gaps = 16/577 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKND------IAMQNTILNA--YAKCGCLDEARKLFDEM 53
C L KL + +HA IL + +N+ ++ LN+ YA +
Sbjct: 28 CNTLSKLTQ---IHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPT 84
Query: 54 PVKDMVTWTALISGYSQN-DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
P D + LI YSQ D N+ + + MLR G+ PN+FT VLK AG +
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGC-AGIGSLRL 143
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARF--DQMDDAWFLFTALESKNEVSWNALIAGH 170
G+ VH +K+G++ +V+V ++L+ MY D + A +F + V+W+A+IAG
Sbjct: 144 GKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGF 203
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
R +A+ F EM G P + SV +A A G+LE GKWV ++V K
Sbjct: 204 VRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSV 263
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ N L+DM+AK G+++ A K+F ++ R +VSW S++ G A HG G V F++M+ N
Sbjct: 264 ELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVEN 323
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDR 349
GI P+ V F+ VL+ACSH+GL+D+G+ YF M+++ + P+ HY VDLL R G +
Sbjct: 324 GITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKE 383
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A +F+++MP EP +W ++ AC ++LG ++ + + +P ++LL+NIYA
Sbjct: 384 AFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAK 443
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
+ + R+MM G+KK P + +E N ++ FVA D +H Q I++ E+ +
Sbjct: 444 LRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGRE 503
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
IK+ GYVP +S VL D++++E L HSEKLA+AFAL++TPPG++I I KN+RVC DC
Sbjct: 504 IKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDC 563
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
HSA KF SKV REI+VRD NRFHHF++G CSC D+W
Sbjct: 564 HSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/564 (38%), Positives = 323/564 (57%), Gaps = 2/564 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
H++ R H + + + + + +L+ Y +C +DEA K+FD + ++ + +
Sbjct: 125 HVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNS 184
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I+G+ Q + + + M+R + + + +VL A + G QVH LK
Sbjct: 185 MINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVL-GHCASTKEVVLGSQVHTQALKR 243
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ NVYVGS+L+DMY + D +A +F L KN VSW A++ + + E AL+ F
Sbjct: 244 RLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLF 303
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M EG P F+Y+ + A +L+ G + A +K+G + V N L++MY+KS
Sbjct: 304 LDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKS 363
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GS+EDA +VF + RDVVSWNS++ G A HG + + F ML P+ VTF+ VL
Sbjct: 364 GSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVL 423
Query: 304 TACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
+AC+ GL+DEG Y +M K GV+P + HY V LL R G LD A +FI I
Sbjct: 424 SACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTD 483
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
W +LL +C++++N LG AE+IF+L P D G ++LL+N+YA A R + + R++
Sbjct: 484 VVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRL 543
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M+E GV+KEP SW++ + VH+F + D HP I KK +E+ +KIK IGYVP+ +
Sbjct: 544 MRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVA 603
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L + +++E L HSEKLALAF LI TP G I I KN+R+C DCH A K S R
Sbjct: 604 LHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGR 663
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
I+VRDT RFH DG CSC DYW
Sbjct: 664 RIVVRDTVRFHCIEDGVCSCDDYW 687
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 186/364 (51%), Gaps = 6/364 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L + VHA ++ +A + D+ N ++ Y KCG L AR++FD MP ++ V+ L+S
Sbjct: 31 ELSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY+ + + +A+ L ++ GL N++ LSS + A+ + D GRQ H + +K G
Sbjct: 90 GYASSGRHRDALALL-RVADFGL--NEYVLSSAVAATAHVRSYD-MGRQCHGYAIKAGLA 145
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ YV S++L MY + MD+A +F + S N ++N++I G + + + + M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+R + H SY +V AST + G VH +K +L +VG+ LVDMY K
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 265
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+A +VF L ++++VSW +++T Q+ L + ++ F M G+ PN+ T+ L +C
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L G A K G +++ ++G ++ A + MP + W
Sbjct: 326 AGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVS-W 384
Query: 367 GALL 370
+++
Sbjct: 385 NSII 388
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 156/281 (55%), Gaps = 6/281 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K++ VH L + ++ + + +++ Y KC EA ++F+ +P K++V+W
Sbjct: 224 CASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSW 283
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++ Y+QN+ E+A+ LF M G++PN+FT + L S AG K G + A +
Sbjct: 284 TAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALN-SCAGLATLKNGNALGACTM 342
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ + V ++L++MY++ ++DA +F ++ ++ VSWN++I G+A +A+
Sbjct: 343 KTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAME 402
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +ML P++ ++ V +A A G +++G + ++K G T +V +
Sbjct: 403 AFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLL 462
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCA---QHGLG 277
+ G +++AE+ + + + DVV+W S+L+ C +GLG
Sbjct: 463 CRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 503
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 7/262 (2%)
Query: 112 FGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
G+ VHA ++ ++V ++L+ +Y + ++ A +F A+ S+N VS N L++G+A
Sbjct: 34 LGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYA 92
Query: 172 RKSEGEKALRTFSEMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
AL +LR F + SS A A S + G+ H + IK+G
Sbjct: 93 SSGRHRDAL----ALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+V + ++ MY + +++A KVF+ + +V ++NSM+ G G + M+RN
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
+ V+++ VL C+ + G K +E VD+ G+ A
Sbjct: 209 VGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEA 268
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
+ +P E W A++ A
Sbjct: 269 NRVFEVLP-EKNIVSWTAIMTA 289
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 336/555 (60%), Gaps = 4/555 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA+++ + +++ + NT+++ Y+KC + F M KD+++WT +I+GY+QND
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
A+ LF + + ++ ++ L S+L+AS +++H L+ G + + +
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSV-LKSMLIVKEIHCHILRKGL-LDTVIQN 525
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D+Y + M A +F +++ K+ VSW ++I+ A +A+ F M+ G
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ + +A AS +L +G+ +H ++++ G L + +VDMYA G ++ A+ VF
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVF 645
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+R+ ++ ++ + SM+ HG GKA V F+KM ++P+ ++FL +L ACSHAGLLD
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+G+ +M+ ++ +EP HYV VD+LGRA + A +F++ M EPTA VW ALL A
Sbjct: 706 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR H E+G AA+R+ EL+P + G +L++N++A GR ND + R MK SG++K P
Sbjct: 766 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKI-KQIGYVPDSSHVLSYADQQER 491
CSW+E VH F A D +HP+ I++K E++ K+ +++GYV D+ VL D+ E+
Sbjct: 826 GCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEK 885
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
L HSE++A+A+ L+ TP + + I KN+RVC DCH+ K SK+ R+I++RD NR
Sbjct: 886 VQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANR 945
Query: 552 FHHFRDGFCSCGDYW 566
FHHF G CSCGD W
Sbjct: 946 FHHFESGLCSCGDSW 960
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 173/349 (49%), Gaps = 6/349 (1%)
Query: 2 CTHLKKLKEARIVHAHILGS--AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C + + + R +H+ I + +F+ D + ++ Y KCG LD+A K+FDEMP +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEMPDRTAF 148
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W +I Y N +P +A+ L+ M G+ + ++LKA A D + G ++H+
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC-AKLRDIRSGSELHSL 207
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEK 178
+K GY ++ ++L+ MYA+ D + A LF + K + V WN++++ ++ + +
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-FVGNTLV 237
L F EM G P ++ S TA + GK +HA V+KS +V N L+
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
MY + G + AE++ ++ DVV+WNS++ G Q+ + K + +F M+ G ++V
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
+ ++ A L G A + KHG + T +D+ + L
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 3/308 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C L+ ++ +H+ ++ + + + N +++ YAK L AR+LFD K D V
Sbjct: 192 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W +++S YS + + + LF +M G PN +T+ S L A G + K G+++HA
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD-GFSYAKLGKEIHASV 310
Query: 121 LKYG-YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK + +YV ++L+ MY R +M A + + + + V+WN+LI G+ + ++A
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L FS+M+ G + S +S+ A +L G +HA+VIK G VGNTL+DM
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K + F R+ +D++SW +++ G AQ+ + F + + + +++
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 300 LCVLTACS 307
+L A S
Sbjct: 491 GSILRASS 498
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 113 GRQVHAFCLKYGYDWNV-YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
GRQ+H+ K + + ++ L+ MY + +DDA +F + + +WN +I +
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 172 RKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAF 231
E AL + M EG S+ ++ A A + G +H+ ++K G F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+ N LV MYAK+ + A ++F+ ++ D V WNS+L+ + G T+ F +M
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDR 349
G APN T + LTAC G+ A + K E + + + R G + +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 350 ALKFIREMPIEPTAAVWGALL 370
A + +R+M W +L+
Sbjct: 339 AERILRQMN-NADVVTWNSLI 358
>gi|297795827|ref|XP_002865798.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311633|gb|EFH42057.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 701
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/570 (37%), Positives = 336/570 (58%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK ++ + V+ I+ + F+ + M N IL + KCG + +AR+LFDEMP +++ ++
Sbjct: 133 CIRLKSIRCVKRVYGFIISNGFEPEKYMMNRILLMHVKCGMIIDARRLFDEMPERNLFSY 192
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISG+ E A LF M T + +L+AS AG G+Q+H L
Sbjct: 193 NSIISGFVNFGNYEEAFELFKLMWEELSDCETHTFAVMLRAS-AGLWSVYVGKQLHVCAL 251
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G N +V L+DMY++ ++DA F ++ K V+WN ++AG+A E+AL
Sbjct: 252 KLGVVDNTFVSCGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYALHGYSEEALC 311
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
EM G F+ S + LE K HA +I+SG + LVD Y+
Sbjct: 312 LLYEMRDSGVSMDQFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIVANTALVDFYS 371
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A VF++L +++++SWN+++ G A HG G VR FE+M+ +APN VTFL
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAKVAPNHVTFLA 431
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+++GL ++G F M + HG++P HY ++LLGR GLLD A+ FIR P++
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
T +W ALL ACRM N+ELG AE+++ + P G +++L N+Y S G+ +AA
Sbjct: 492 TTVNMWAALLNACRMQGNLELGRVVAEKLYGMGPEKLGNYVVLYNMYNSMGKTAEAAGVL 551
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVAND--DAHPQ--RAMIHKKWREISEKIKQIGYV 476
+ ++ G+ PAC+WVE + H F++ D D++ + + +++K E+ E+I + GY+
Sbjct: 552 ETLESKGLSMIPACTWVEVGDQTHSFLSGDRFDSYNETVKREVYQKVDELMEEIYEYGYL 611
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
+ ++L D++E E + HSEKLA+A+ L++TP + + I +N R+C DCH +F
Sbjct: 612 AEEKNLLPDVDEKEEERVGRYHSEKLAIAYGLMNTPEWNPLQITQNHRICKDCHKVVEFI 671
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S V RE++VRD +RFHHF++G CSCG YW
Sbjct: 672 SLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/559 (39%), Positives = 334/559 (59%), Gaps = 12/559 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCG---CLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+H+ +L +D + +++ Y K ++ ARK+F MP ++++WTALISGY Q
Sbjct: 271 LHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQ 330
Query: 71 -NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
Q NA+ L +ML ++PN T SS+LKA A +D GRQ+HA +K
Sbjct: 331 CGGQENNAVELLCEMLNESIEPNHLTYSSLLKAC-ANLSDQDSGRQIHARVMKTSIGNVN 389
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
VG++L+ MYA M++A F L +N +S ++ I R + S++
Sbjct: 390 VVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWS-----SQIESM 444
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
+ F+++S+ +A A+ G +G+ +HA IK+G + + N+LV MY++ G ++DA
Sbjct: 445 DVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDA 504
Query: 250 EKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
+ F+ + +V+SW S+++ A+HG + + F M+ +G+ PN VT++ VL+ACSH
Sbjct: 505 CRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSH 564
Query: 309 AGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
GL+ EG+ YF M+K H + P HY VDLL R+GL+ AL+FI EMP + A VW
Sbjct: 565 VGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWK 624
Query: 368 ALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESG 427
LLGACR ++N+E+G AA + +L+P D P++LL+N+YA G ++ AR R +M+
Sbjct: 625 TLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRN 684
Query: 428 VKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYAD 487
+ KE SW+ N +H F A D +HP+ I+ K + +IK IGYVPD+S VL
Sbjct: 685 LSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMS 744
Query: 488 QQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
+ +E L HSEK+A+AF LI+T P I I KN+RVC DCHSA K+ SK REII+R
Sbjct: 745 DKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILR 804
Query: 548 DTNRFHHFRDGFCSCGDYW 566
D+NRFH +DG CSCG+YW
Sbjct: 805 DSNRFHRMKDGKCSCGEYW 823
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 213/456 (46%), Gaps = 45/456 (9%)
Query: 11 ARIVHAHILGS-AFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALISGY 68
R +H +LG+ D + N++L Y+KCG + AR++FD M ++D+V+WTA+
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW- 127
++N + A++L +ML GL+PN FTL + A G G V F +K G+ W
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGF-WG 180
Query: 128 -NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+V VG +L+DM+AR + A +F L + V W +I + + KA+ F M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK---S 243
L +GFEP ++ SS+ +A A GS G+ +H+ V++ G V LVDMY K
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
S+E A KVF R+ +V+SW ++++G Q G V +ML I PN +T+ +
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSL 360
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF--------- 353
L AC++ D G+ A + K + V + +G ++ A K
Sbjct: 361 LKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNL 420
Query: 354 --------------------IREMPIEPTAAVWGALLGACRM----HKNVELGAYAAERI 389
I M + + + +LL A K +L A + +
Sbjct: 421 LSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTG 480
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
FE D G L ++Y+ G L+DA RA M++
Sbjct: 481 FE---SDKGISNSLVSMYSRCGYLDDACRAFDEMED 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 175/336 (52%), Gaps = 18/336 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L R +HA ++ ++ N + N +++ YA+ GC++EARK FD++ +++++
Sbjct: 364 CANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLST 423
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ I +++ + SQ+ + + + FT +S+L A+ K G+Q+HA +
Sbjct: 424 SSDIGETGRSNASWS-----SQIESMDVGVSTFTFASLLSAAATVGLPTK-GQQLHALSI 477
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
K G++ + + +SL+ MY+R +DDA F +E N +SW ++I+ A+ E+AL
Sbjct: 478 KTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERAL 537
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVD 238
F +M+ G +P +Y +V +A + G +++GK + ++ +L+ + + +VD
Sbjct: 538 SLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKE-YFRSMQKDHRLIPRMEHYACMVD 596
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP 294
+ A+SG +++A + N + K D + W ++L C + +G+ R + AP
Sbjct: 597 LLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAP 656
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
++ + +H GL DE +LM+ + E
Sbjct: 657 ----YVLLSNLYAHGGLWDEVARIRSLMRHRNLSKE 688
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 321/562 (57%), Gaps = 40/562 (7%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H + + + N +++ Y KCG L EAR + DEM +D+V+W +L+ GY+Q
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N + ++A+ + +M + + + T++S+L A T+ NV
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE------------------NV- 259
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
MY + +F + K+ VSWN +I + + + +A+ +S M +G
Sbjct: 260 -------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
FEP S +SV A T +L GK +H ++ + + N L+DMYAK G +E A
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKAR 364
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF + RDVVSW +M++ G G V F K+ +G+ P+ + F+ L ACSHAG
Sbjct: 365 DVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
Query: 311 LLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
LL+EG+ F LM H + P H VDLLGRAG + A +FI++M +EP VWGAL
Sbjct: 425 LLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGAL 484
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
LGACR+H + ++G AA+++F+L P SG ++LL+NIYA AGR + R +MK G+K
Sbjct: 485 LGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLK 544
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
K P S VE +H F+ D +HPQ I+++ + +K+K++GYVPDS L +++
Sbjct: 545 KNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEE 604
Query: 490 EREAKLQVHSEKLALAFALISTP-----PGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
++E L VHSEKLA+ FAL++T +TI I KN+R+CGDCH A K S++ REI
Sbjct: 605 DKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREI 664
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
I+RDTNRFH FR G CSCGDYW
Sbjct: 665 IIRDTNRFHVFRFGVCSCGDYW 686
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 39/367 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++ R VH+ I+ + + ++ ++ AYA + ARK+FDE+P ++++ +I
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y N + +F M ++P+ +T VLKA T GR++H K G
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT-IVIGRKIHGSATKVGLSS 173
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++VG+ L+ MY + + +A + + ++ VSWN+L+ G+A+ + AL EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM- 232
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD--MYAKSGS 245
E + +H G++ L+ V NT + MY K
Sbjct: 233 -ESVKISH-----------DAGTM--------------ASLLPAVSNTTTENVMYVKD-- 264
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+F ++ K+ +VSWN M+ ++ + V + +M +G P+ V+ VL A
Sbjct: 265 ------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C L G+ +++ + P +D+ + G L++A M +
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS- 377
Query: 366 WGALLGA 372
W A++ A
Sbjct: 378 WTAMISA 384
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 138/335 (41%), Gaps = 28/335 (8%)
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
D + R VH+ + N +G L+ YA + A +F + +N + N +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ + ++ F M P H+++ V A + +G++ G+ +H K G
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
FVGN LV MY K G + +A V + + +RDVVSWNS++ G AQ+ + +M
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 289 RNGIAPNQVTFLCVLTACSHA---GLLDEGQGYFALMKKH--------GVEPEEAHYVTF 337
I+ + T +L A S+ ++ +F + KK GV + A V
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
V+L R + EP A ++L AC + LG I +
Sbjct: 294 VELYSR----------MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI---ERKKL 340
Query: 398 GPHILLAN----IYASAGRLNDAARARKMMKESGV 428
P++LL N +YA G L A + MK V
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 15/232 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I ++ ++N +++ YAKCGCL++AR +F+ M +D+V+W
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TA+IS Y + + +A+ LFS++ GL P+ + L A S AG ++ GR C
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE--GRS----C 432
Query: 121 LK-----YGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKS 174
K Y + + ++D+ R ++ +A+ F+ NE W AL+ S
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
+ + L ++ + E + + Y + A G E+ + +++KS G
Sbjct: 493 DTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNIR-NIMKSKG 542
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 334/571 (58%), Gaps = 10/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLF---DEMPVKDM 58
C L KL + +H HI+ F+N+ + +A + + A L ++ V D
Sbjct: 17 CNTLPKLAQ---LHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDA 73
Query: 59 VTWTALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++ +I Y+++ Q + NAI ++ ML G+ PN++ VLKA AG D G+ VH
Sbjct: 74 FLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKAC-AGLRDLNLGKAVH 132
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQ-MDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
+K+G+D +++V ++++ MY M+ A LF + + V+W A+I G+AR +
Sbjct: 133 GSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQS 192
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
A+ F +M G P + SV +A G+LE GKW+ +++ K + N L
Sbjct: 193 AGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNAL 252
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
VDM+AK G ++ A +F + KR +VSW S++ G A HG G V FE+M +G+ P
Sbjct: 253 VDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPED 312
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
+ F+ +L+ACSH+GL++ G+ YF+ M ++ G+ P+ HY VDLL RAGL+ AL+F+
Sbjct: 313 IAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVE 372
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MPIEP +W L+ ACR+H ++LG ++++ +P ++LL+NIY
Sbjct: 373 RMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEK 432
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
++ R M + G++K P + +E N +H F+ D +H Q I K E+ ++K+ GY
Sbjct: 433 KSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGY 492
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
P ++ V D++++E L HSEKLA+AFAL++TPPGS I I KN+RVCGDCHSA KF
Sbjct: 493 APTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKF 552
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK+ REI++RD +RFHHFRDG CSCGD+W
Sbjct: 553 ISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/569 (37%), Positives = 333/569 (58%), Gaps = 5/569 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C + ++ R +HA +L S D + +++ YA CG + AR++FDEMP + ++
Sbjct: 78 CVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFL 137
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W LI Y+++ E AI L+ ML G +KP+ FT VLKA A D GR+VH
Sbjct: 138 WNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAA-LLDLSAGREVHDR 196
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
++ + +V+V + L+DMYA+ MD+AW +F ++ WN++IA + +A
Sbjct: 197 VMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEA 256
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L M EG PT + S +A A +L +G+ +H + + G + +L+DM
Sbjct: 257 LTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDM 316
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVT 298
YAKSG + A +F +LL R+++SWN+M+ G HG F +M + P+ +T
Sbjct: 317 YAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHIT 376
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ VL+AC+H G++ E + F LM + ++P HY VD+LG +G A I+ M
Sbjct: 377 FVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGM 436
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
++P + +WGALL C++HKNVEL A +++ EL+P D+G ++LL+NIYA +G+ +AA
Sbjct: 437 LVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAA 496
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R RK+M G+KK ACSW+E K H F+ D +HP+ I+++ + I Q GYVP
Sbjct: 497 RVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVP 556
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
D++ V + E+ + HSE+LA+AF LISTPP + + + KN+RVC DCH K S
Sbjct: 557 DTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLIS 616
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
++ +REII+RD NR+HHF +G CSC D+W
Sbjct: 617 QIEQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
H +Y+++ + + ++ G+ +HA ++ SG L A + LVD+YA G + A +VF
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 254 NRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGL 311
+ + + +V WN ++ A+ G +A + + ML G + P+ T+ VL AC+
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L G+ + + + +D+ + G +D A + I AAVW +++
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIR-DAAVWNSMIA 245
Query: 372 AC 373
AC
Sbjct: 246 AC 247
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 340/576 (59%), Gaps = 12/576 (2%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
KC+ + L + + VH + F + N++++ Y+KCG + EA ++F+ +PV+++++
Sbjct: 13 KCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVIS 72
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
W A+I+GY+ E A+ LF +M G P+ +T SS LKA S A A + G Q+HA
Sbjct: 73 WNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGE--GMQIHAA 130
Query: 120 CLKYGYDW--NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+++G+ + V +L+D+Y + +M +A +F +E K+ +SW+ LI G+A++ +
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLK 190
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTL 236
+A+ F E+ F SS+ A LEQGK +HA+ IK G L V N++
Sbjct: 191 EAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSV 250
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+DMY K G +A+ +F +L+R+VVSW M+TG +HG+G V F +M NGI P+
Sbjct: 251 LDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDS 310
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VT+L VL+ACSH+GL+ EG+ YF+++ ++P+ HY VDLLGR G L A I
Sbjct: 311 VTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIE 370
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
+MP++P +W LL CRMH +VE+G E + + ++ +++++N+YA AG +
Sbjct: 371 KMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKE 430
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIG 474
+ + R+ +K G+KKE SWVE +H+F D HP IH+ +E+ +++K ++G
Sbjct: 431 SEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMG 490
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI----STPPGSTIHIKKNIRVCGDCH 530
YV + L +++ + L+VHSEKLA+ L+ I I KN+RVCGDCH
Sbjct: 491 YVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCH 550
Query: 531 SAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ K SKV++ +VRD NRFH F +G CSCGDYW
Sbjct: 551 AFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 329/562 (58%), Gaps = 22/562 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A VH ++ + D+ + + +++ YAK G L A LF +P +++ A+I+G+ +
Sbjct: 231 AEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCR 290
Query: 71 N---DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
D A+ L+S++ G++P++F+ SS+L+A A + FG+Q+H LK+ +
Sbjct: 291 EEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNL-AGEFGFGKQIHGQVLKHSFQG 349
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+VY+GS+L+D+Y+ M+D + F +L ++ V W ++I+G + E+ALR F E +
Sbjct: 350 DVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESV 409
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R G P F+ SSV A AS G+ + +KSG +GN+ + M A+SG ++
Sbjct: 410 RCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVD 469
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP-NQVTFLCVLTAC 306
A + F + RDVVSW+++++ A HG + + F +ML +AP N++TFL +LTAC
Sbjct: 470 AATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTAC 529
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH GL+DEG Y+ +M ++G+ P H VDLLGRAG L A FIR+ A V
Sbjct: 530 SHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVV 589
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
W +LL +CR+H ++E G A++I +L+P S +++L N+Y AG L+ A++ R +MKE
Sbjct: 590 WRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKE 649
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
GVKKEP SW+E + VH FVA D +HP+ I++K E+ K+ I
Sbjct: 650 RGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGI------------ 697
Query: 486 ADQQEREAKLQ-VHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
RE L HSEKLA+AF +I P + I + KN+RVC DCHS + SK REI
Sbjct: 698 ---SSREQDLAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREI 754
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
I+RD RFH FRDG CSCG YW
Sbjct: 755 ILRDAIRFHRFRDGSCSCGGYW 776
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 203/382 (53%), Gaps = 12/382 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ ++ + VHA ++ N + + N++ + YA+CG + EAR++FD +D V+W
Sbjct: 112 CSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSW 171
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG-------- 113
AL+SGY + E + +FS M R GL N F L S++K + ++ G
Sbjct: 172 NALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIA 231
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
VH +K G D ++++ S+++DMYA+ + +A LF ++ N + NA+IAG R+
Sbjct: 232 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCRE 291
Query: 174 SEGE---KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ +AL +SE+ G +P+ FS+SS+ A G GK +H V+K Q
Sbjct: 292 EAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
++G+ L+D+Y+ SG +ED + F L K+DVV W S+++GC Q+ L + +R F++ +R
Sbjct: 352 YIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRC 411
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
G+ P+ V+ AC+ + G+ L K G A +F+ + R+G +D A
Sbjct: 412 GLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAA 471
Query: 351 LKFIREMPIEPTAAVWGALLGA 372
+ +EM + W A++ +
Sbjct: 472 TRRFQEMESRDVVS-WSAVISS 492
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 184/374 (49%), Gaps = 16/374 (4%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLD--EARKLFDEMPVKDMVTWTALISGYSQN 71
VHAH+ + + ++N +L +Y + G A +L DEMP ++ V++ +I YS+
Sbjct: 21 VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRA 80
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
P ++ F++ ++FT ++ L A + A D + G+ VHA + G +++
Sbjct: 81 GLPALSLATFARARAWARVVDRFTYAAALAAC-SRALDVRTGKAVHAMVVLGGLGNGLFL 139
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
+S+ MYAR +M +A +F A E +++VSWNAL++G+ R E+ L FS M R G
Sbjct: 140 SNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGL 199
Query: 192 EPTHFSYSSVFTAL---------ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
F+ S+ G + VH V+K+G F+ + ++DMYAK
Sbjct: 200 GWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAK 259
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTG-CAQHG--LGKATVRWFEKMLRNGIAPNQVTF 299
G++ +A +F + +V+ N+M+ G C + + + + + ++ G+ P++ +F
Sbjct: 260 RGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSF 319
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+L AC+ AG G+ + KH + + +DL +G ++ + R +P
Sbjct: 320 SSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLP- 378
Query: 360 EPTAAVWGALLGAC 373
+ +W +++ C
Sbjct: 379 KQDVVIWTSVISGC 392
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD--AWFLFTALESKNEVSWNALIAGHARK 173
VHA + + ++++ + LL Y R A L + +N VS+N +I ++R
Sbjct: 21 VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRA 80
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+L TF+ F+Y++ A + + GK VHA V+ G F+
Sbjct: 81 GLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLS 140
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N++ MYA+ G + +A +VF+ +RD VSWN++L+G + G + T+ F M R+G+
Sbjct: 141 NSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLG 200
Query: 294 PNQVTFLCVLTACSHAGLL----DEGQGYFA-----LMKKHGVEPEEAHYVTFVDLLGRA 344
N ++ C+ + D G G A + K G++ + +D+ +
Sbjct: 201 WNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKR 260
Query: 345 GLLDRALKFIREMPIEPTAAVWGALL-GACR 374
G L A+ + +P +P V A++ G CR
Sbjct: 261 GALTNAVALFKSVP-DPNVIVLNAMIAGFCR 290
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + + S F AM N+ ++ A+ G +D A + F EM +D+V+W
Sbjct: 427 CASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSW 486
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+A+IS ++ + +A+ +F++ML + PN+ T S+L A G D+ R
Sbjct: 487 SAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMN 546
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIA 168
+YG + + ++D+ R ++ DA F+ + + V W +L+A
Sbjct: 547 DEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 595
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/572 (39%), Positives = 334/572 (58%), Gaps = 8/572 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L R ++ I A + D ++++++ Y +C ++EA + FD P KD+V W
Sbjct: 143 CTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCW 202
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+IS Y+ N + A+ L +M G+K T S+L A A D + G H
Sbjct: 203 TAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDAC-ASTMDLRNGVAFHQRAA 261
Query: 122 KYGYDWN-VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G D + V +L+++Y + ++DDA + A+ + VSW A+IA +A+ +A+
Sbjct: 262 AIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAI 321
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDM 239
F M EG EP+ + SV + A G+L GK +HA + S + N ++ M
Sbjct: 322 NLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITM 381
Query: 240 YAKSGSIEDAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG-IAPNQ 296
Y K G++E A +VF L R VV+W +M+ AQ+G+G+ + F++ML +G PN+
Sbjct: 382 YGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNR 441
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI- 354
VTFL VL ACSH G L++ +F M GV P HY VDLLGRAG L A K +
Sbjct: 442 VTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLL 501
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R E W A L AC+M+ ++E AA+R+ EL+P + +LL+N+YA+ GR
Sbjct: 502 RHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRA 561
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
D AR R MK SGVKK SW+E N VH F+ +D +HP++ I+ + + +IK+ G
Sbjct: 562 DVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAG 621
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD+ VL D++++ L HSE+LA+A +ISTPPG+T+ + KN+RVC DCH+A K
Sbjct: 622 YVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATK 681
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
F S++V R+IIVRDT+RFHHF+DG CSCGDYW
Sbjct: 682 FISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 177/370 (47%), Gaps = 4/370 (1%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L E R +HA I + + N +++AY+K G L A+ F + + + +W L+
Sbjct: 46 RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILM 105
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ Y+QN P A LF M G++PN TLS+ L A A A + GR+++
Sbjct: 106 AAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTA-ARNLALGRKLNELIASEAL 164
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + +V SSL+ MY R ++++A F K+ V W A+I+ +A +AL
Sbjct: 165 EIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRR 224
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSG 244
M EG + +Y S+ A AST L G H G + V TLV++Y K G
Sbjct: 225 MDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCG 284
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++DA +V + + R VSW +M+ AQ+G + F+ M G P+ +T + V+
Sbjct: 285 RVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVD 344
Query: 305 ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTA 363
+C+ G L G+ A ++ + + + + G+ G L+ A + +P+ +
Sbjct: 345 SCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRS 404
Query: 364 AV-WGALLGA 372
V W A++ A
Sbjct: 405 VVTWTAMIRA 414
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 42/252 (16%)
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L++ + +HA + F+GN LVD Y+K GS+ A+ F R+ + SWN ++
Sbjct: 48 LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
AQ+G + F M G+ PN VT L AC+ A L G+ L+ +E +
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167
Query: 331 EAHYVTFVDLLGRAGLLD-------------------------------RALKFIREMPI 359
+ + + GR ++ RAL+ +R M +
Sbjct: 168 SHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDL 227
Query: 360 E------PTAAVWGALLGACRMHKNVELGAYAAER--IFELDPHDSGPHILLANIYASAG 411
E PT + +LL AC ++ G +R LD + L N+Y G
Sbjct: 228 EGIKLGLPT---YVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCG 284
Query: 412 RLNDAARARKMM 423
R++DA R M
Sbjct: 285 RVDDARRVLDAM 296
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 339/566 (59%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT K +H+ ++ F +D+A ++L+ Y+ G L++A KLFDE+P + +VTW
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TAL SGY+ + + AI LF +M+ +G+KP+ + + VL A D G + +
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC-VHVGDLDSGEWIVKYME 239
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N +V ++L+++YA+ +M+ A +F ++ K+ V+W+ +I G+A S ++ +
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML+E +P FS ++ AS G+L+ G+W + + + F+ N L+DMYA
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ +VF + ++D+V N+ ++G A++G K + F + + GI+P+ TFL
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C HAGL+ +G +F A+ + ++ HY VDL GRAG+LD A + I +MP+
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VWGALL CR+ K+ +L + + L+P ++G ++ L+NIY+ GR ++AA R
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MM + G+KK P SW+E + VH F+A+D +HP I+ K ++ +++ +G+VP +
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE 599
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V +++E+E L HSEKLA+A LIST G I + KN+RVCGDCH K SK+
Sbjct: 600 FVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKIT 659
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFH F +G CSC DYW
Sbjct: 660 RREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+Q+H + + + ++ + LL F Q ++ LF+ + N +N+LI G
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ L F + + G F++ V A S + G +H+ V+K G
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+L+ +Y+ SG + DA K+F+ + R VV+W ++ +G G + + F+KM+ G+
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ + VL+AC H G LD G+ M++ ++ T V+L + G +++A
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 354 IREMPIEPTAAVWGALL 370
M +E W ++
Sbjct: 270 FDSM-VEKDIVTWSTMI 285
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 304/523 (58%), Gaps = 11/523 (2%)
Query: 54 PVKDMVTWTALISGYSQ-NDQP----ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
P + W LI + Q QP + I +F +M G++P+ T +L+ S A +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQ-SFASPS 78
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
GR VHA L++G + +V +SL+ MY+ +D A LF + +N +SW+ +I
Sbjct: 79 LLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMIN 138
Query: 169 GHARKSEGEKALRTFSEMLREGF---EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
G+ R + ++AL F EM G P F+ S V A G+LE GKW HA++ K G
Sbjct: 139 GYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCG 198
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWF 284
+ +G L+DMYAK GS+E A VF+ L +DV++W++M++G A HGL + V F
Sbjct: 199 MPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLF 258
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGR 343
KM+ G+ PN VTFL V AC H GL+ EG+ Y M + + + P HY VDL GR
Sbjct: 259 SKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGR 318
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILL 403
AG + A ++ MP+EP VWGALL RMH ++E A +++ EL+P +SG ++LL
Sbjct: 319 AGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLL 378
Query: 404 ANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKW 463
+N+YA GR D R +M+ G+KK P CS +E +H F DD+HP+ IH
Sbjct: 379 SNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMML 438
Query: 464 REISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNI 523
EI E++K GYV ++ VL D++ +E L +HSEKLALA+ + T PG+ I I KN+
Sbjct: 439 EEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNL 498
Query: 524 RVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
R+C DCH A K SKV +REIIVRD NRFHHF G CSC DYW
Sbjct: 499 RICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 160/276 (57%), Gaps = 11/276 (3%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L R VHA IL D +Q ++++ Y+ G +D AR LF MP +++++W+ +I+G
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMING 139
Query: 68 YSQNDQPENAIILFSQMLRLG---LKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKY 123
Y + Q + A+ LF +M LG ++PN+FT+S VL A G GA + G+ HA+ K
Sbjct: 140 YVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEH--GKWAHAYIDKC 197
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKALRT 182
G +V +G++L+DMYA+ ++ A ++F+ L +K+ ++W+A+I+G A E+ +
Sbjct: 198 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGL 257
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMY 240
FS+M+ +G P ++ +VF A G + +GK + + ++ + + +VD+Y
Sbjct: 258 FSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK-DYLRRMTEDYSIIPTIQHYGCMVDLY 316
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
++G I++A V + ++ DV+ W ++L+G HG
Sbjct: 317 GRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 352
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C L L+ + HA+I D+ + +++ YAKCG +++A +F + P KD++
Sbjct: 178 CGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMA 237
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+A+ISG + + E + LFS+M+ G++PN T +V A G + +
Sbjct: 238 WSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMT 297
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG---HARKSEG 176
Y + ++D+Y R ++ +AW + ++ + +V W AL++G H
Sbjct: 298 EDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETC 357
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
E AL+ E+ EPT+ S + L++ + ++G+W
Sbjct: 358 ELALKKLIEL-----EPTN---SGAYVLLSNVYA-KRGRW 388
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/562 (35%), Positives = 341/562 (60%), Gaps = 3/562 (0%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L+ + VHAHI+ S ++ +++ G + AR+LF +P D + +L+
Sbjct: 103 RLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLK 162
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
S+ + ++ + +ML G + +T +SV+KA A + + G+++H+ + GY
Sbjct: 163 VTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKAC-ADLSALRLGKEIHSHVMVCGYG 221
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++YV ++L+ +YA+ M A +F A+ + ++WN+LI+G+ + ++++ F M
Sbjct: 222 SDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 281
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ GF+P + S+ ++ + G+L+ G W+H + +G L +G +L++MY + G++
Sbjct: 282 MESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNV 341
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A +VF+ + +R+VV+W +M++G HG G+ + F +M G PN +TF+ VL+AC
Sbjct: 342 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 401
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE-MPIEPTAA 364
+H+GL+D+G+ F+ MK+ +G+ P H V VD+ GRAGLL+ A +FI++ +P EP A
Sbjct: 402 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 461
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
VW ++LGACRMH+N +LG AE + ++P + G +++L+NIYA AGR++ R MM
Sbjct: 462 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMT 521
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
+KK+ S +E ++F D +HPQ I++ E+ + + GYVP ++
Sbjct: 522 RRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMH 581
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
+++ER+ L+ HSEKLALAF L+ T G TI I KN+R+C DCHSA K S + +REI
Sbjct: 582 DLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREI 641
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
IVRD RFHHF+DG CSC DYW
Sbjct: 642 IVRDKFRFHHFKDGSCSCLDYW 663
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 45/361 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + +H+H++ + +D+ +Q ++ YAK + A+K+FD MP + ++ W
Sbjct: 199 CADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAW 258
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+LISGY QN P+ +I LF M+ G +P+ T+ S+L + S GA D FG +H +
Sbjct: 259 NSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALD--FGCWLHDYA 316
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G+D NV +G+SL++MY R + A +F +++ +N V+W A+I+G+ G +A+
Sbjct: 317 DGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAM 376
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDM 239
F+EM G P + ++ +V +A A +G ++ G+ V + + ++ G + N +VDM
Sbjct: 377 ELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDM 436
Query: 240 YAKSGSIEDAEKVFNRLLKRD--VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+ ++G + DA + + + ++ W SML C H V+ E +L
Sbjct: 437 FGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVL--------- 487
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE-AHYVTFVDLLGRAGLLDRALKFIRE 356
VEPE HYV ++ AG +DR ++ +R
Sbjct: 488 ----------------------------SVEPENPGHYVMLSNIYALAGRMDR-VEMVRN 518
Query: 357 M 357
M
Sbjct: 519 M 519
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 197 SYSSVFTALASTGS-LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
S+S V AL +G L + VHAH+I SG + L+ + +GSI A ++F
Sbjct: 89 SHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPT 148
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D ++S+L ++ G TV ++ +ML +G + TF V+ AC+ L G
Sbjct: 149 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLG 208
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + + G + + L +A + A K MP + T W +L+
Sbjct: 209 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP-QRTIIAWNSLI 262
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 348/626 (55%), Gaps = 63/626 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK----- 56
C + L A+ +H ++ +D+++ N +++ Y+K G L+ AR++FD M +
Sbjct: 785 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 844
Query: 57 ------------------------------DMVTWTALISGYSQNDQPENAIILFSQMLR 86
D+VTW L+SG+ + E + + +M
Sbjct: 845 NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 904
Query: 87 LGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G KPN +++SVL+A S G + G++ H + L+ G+D +VYVG+SL+DMY + +
Sbjct: 905 EGFKPNSSSMTSVLQAISELGFLN--MGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSL 962
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG--------------- 190
A +F ++++N +WN+L++G++ K E ALR ++M +EG
Sbjct: 963 XSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGY 1022
Query: 191 ---------FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F P S + + A AS L++GK +H I++G FV L+DMY+
Sbjct: 1023 AMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYS 1082
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KS S+++A KVF R+ + + SWN M+ G A GLGK + F +M + G+ P+ +TF
Sbjct: 1083 KSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 1142
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+AC ++GL+ EG YF +++ + + P HY VDLLGRAG LD A I MP++
Sbjct: 1143 LLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 1202
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +WGALLG+CR+HKN+ AA+ +F+L+P++S +IL+ N+Y+ R D R
Sbjct: 1203 PDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLR 1262
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M +GV+ SW++ VH+F +++ HP I+ + ++ ++K++GYVPD +
Sbjct: 1263 ELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVN 1322
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V D+ E++ L H+EKLA+ + LI G I + KN R+C DCHSA K+ S V
Sbjct: 1323 CVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVK 1382
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
RE+ +RD RFHHFR+G CSC D+W
Sbjct: 1383 ARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 200/429 (46%), Gaps = 63/429 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + +H ++ F D+ ++ ++N Y +C L++A ++F EMP + + W
Sbjct: 684 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLW 743
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
I Q+++ + + LF +M LK T+ VL+A G GA + +Q+H +
Sbjct: 744 NEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNA--AKQIHGYV 801
Query: 121 LKYGYDWNVYVGSSLLDMYAR----------FDQMD---------------------DAW 149
++G D +V + + L+ MY++ FD M+ DAW
Sbjct: 802 FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAW 861
Query: 150 FLFTALESKNE----VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
LF LES + V+WN L++GH E+ L M EGF+P S +SV A+
Sbjct: 862 SLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAI 921
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+ G L GK H +V+++G +VG +L+DMY K+ S+ A+ VF+ + R++ +WN
Sbjct: 922 SELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWN 981
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF------------------------LC 301
S+++G + G+ + +R +M + GI P+ VT+ C
Sbjct: 982 SLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITC 1041
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L AC+ LL +G+ L ++G + +D+ ++ L A K R +
Sbjct: 1042 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ-NK 1100
Query: 362 TAAVWGALL 370
T A W ++
Sbjct: 1101 TLASWNCMI 1109
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 8/293 (2%)
Query: 121 LKYGYDWNVYVGS-SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK- 178
+K WN + +L+ Y F A +F +N + WN+ + + S G
Sbjct: 598 IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVE-EFKSSAGSLH 656
Query: 179 -ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
L F E+ +G YS + G +H +IK G L ++ L+
Sbjct: 657 IVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALM 716
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+ Y + +E A +VF+ + + + WN + Q + V F KM + +
Sbjct: 717 NFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETA 776
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T + VL AC G L+ + + + G++ + + + + + G L+ A + M
Sbjct: 777 TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 836
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASA 410
T++ W +++ + + + A +EL+ D P I+ N S
Sbjct: 837 ENRNTSS-WNSMISS---YAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSG 885
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 332/566 (58%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +++E + H L S + ++NT++ Y+ C EA ++ D++P D+ +
Sbjct: 146 CSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ +SGY + + + +M + L + T S L+ + D RQ+H+ +
Sbjct: 206 SSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLC-SNLRDLNLARQIHSRMV 264
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ V ++++MY + ++ A +F ++N V ++ + + E+AL
Sbjct: 265 RLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALN 324
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M + P ++++ ++A L+ G +H V+KSG + VGN LV+MYA
Sbjct: 325 LFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGSIEDA K F+ + RD+V+WN+M+ G + HGLG+ + F++M+ G PN++TF+
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIG 444
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH G +++G YF LMKK V+P+ HY V LL +AG+ A F+R PIE
Sbjct: 445 VLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
W ALL AC + +N LG AE P+DSG ++LL+NI+A + A R
Sbjct: 505 WDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVR 564
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+M + GVKKEP SW+ +N H+F+A ++ HP+ +I+ K +E+ KI+ +GY PD +
Sbjct: 565 SLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVA 624
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V D+++RE L HSEKLA+A+ L+ TP S +++ KN+R+C DCHSA K SK+
Sbjct: 625 GVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R I++RD+NRFHHFRDG CSC DYW
Sbjct: 685 KRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 8/393 (2%)
Query: 2 CTHLKKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
C + L+ +H H++ S+ D+ N+++N Y KCG ARK+FD MP +++
Sbjct: 41 CANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNV 100
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA-SGAGATDDKFGRQV 116
V+W A++ GY + + LF M+ +PN+F + V K+ S +G ++ G+Q
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEE--GKQF 158
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H LK G + +V ++L+ MY+ +A + L + +++ ++G+
Sbjct: 159 HGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAF 218
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
++ M +E + +Y S ++ L + +H+ +++ G +
Sbjct: 219 KEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAI 278
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++MY K G + A++VF+ +++V +++ Q + + F KM + PN+
Sbjct: 279 INMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNE 338
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE 356
TF L + + LL G L+ K G V++ ++G ++ A K
Sbjct: 339 YTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 357 MPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
M W ++ H G A +R+
Sbjct: 399 MTFRDIVT-WNTMICGFSHHGLGREGLEAFDRM 430
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/569 (37%), Positives = 334/569 (58%), Gaps = 7/569 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTIL--NAYAKCGCLDEARKLFDEMPVKDM 58
+CT + LK + AH++ + D + + ++ +A G + A ++F ++
Sbjct: 16 RCTRVGDLKA---IQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNL 72
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W +I GYS +D P AI L+ M G+ PN +T VLKA + G+++H+
Sbjct: 73 FMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCE-GQELHS 131
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G D+ + + L+ +YA MD A +F + + SW+ +++G+A+ + +
Sbjct: 132 QIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVE 191
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL+ F EM E F+ +SV G+L+ GKWVH+++ K G ++ +G LV
Sbjct: 192 ALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVG 251
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY+K GS+++A KVF + +RDV +W++M+ G A HG G+ ++ F+ M R+ PN VT
Sbjct: 252 MYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVT 311
Query: 299 FLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F VL+ACSH+GL+++G F M ++ + P+ HY VDL RAG++ A KFI+ M
Sbjct: 312 FTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTM 371
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
PIEP +W LLGAC+ H +LG + + +I +LDP ++L++N+YAS GR +
Sbjct: 372 PIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVC 431
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
+ R +MK+ KK+ S +E VH F+ D++HP+R I+ +++ K+KQ+G+V
Sbjct: 432 QVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVN 491
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
+ VL D++E+E L +HSE+LA+A+ L+ TP GS I I KN+RVC DCH K S
Sbjct: 492 STVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLIS 551
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V REIIVRD RFHHFR+ CSC DYW
Sbjct: 552 EVYNREIIVRDRVRFHHFRERGCSCNDYW 580
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 332/597 (55%), Gaps = 36/597 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L LK I+HAH++ + D+ + +++ LD A ++F ++ ++ +
Sbjct: 25 CTTLSHLK---IIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIY 81
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ I G+S + P+ + + Q R GL P+ T ++KA + D G Q H +
Sbjct: 82 NSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLD-MGIQAHGQII 140
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWF------------------------------- 150
++G+D +VYV +SL+ MY+ + A +
Sbjct: 141 RHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARK 200
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
LF + KN V+W+ +I+G+A+ S +KA+ + + EG SV + A G+
Sbjct: 201 LFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGA 260
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
LE G+ H +++++ + +G LVDMYA+ GSI+ A VF++L RD +SW +++ G
Sbjct: 261 LELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAG 320
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEP 329
A HG + + +F +M + G+ P ++TF VL+ACSH GL++ G F MK+ + +EP
Sbjct: 321 FAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEP 380
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
HY VDLLGRAG L A KF+ EMP++P A +WGALLGACR+HKN E+ A + +
Sbjct: 381 RLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTL 440
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
EL P SG ++LL+NIYA + + R+MMKE GV K P + E VH F
Sbjct: 441 IELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIG 500
Query: 450 DDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALI 509
D HP+ I + W EI KI+ GY ++ L D++E+E+ + HSEKLA+A+A++
Sbjct: 501 DKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIM 560
Query: 510 STPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
T I I KN+RVC DCH+A K SKV ERE+IVRD NRFHHF+ G CSC DYW
Sbjct: 561 RTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
L S +L K +HAH+I++ F + L+ + ++ A +VF ++ ++ +
Sbjct: 22 LESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIY 81
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK 324
NS + G + + ++ + RNG+ P+ +T+ ++ AC+ G LD G + +
Sbjct: 82 NSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIR 141
Query: 325 HGVEPE---EAHYVTFVDLLG 342
HG + + + VT LG
Sbjct: 142 HGFDSDVYVQNSLVTMYSTLG 162
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/565 (39%), Positives = 332/565 (58%), Gaps = 39/565 (6%)
Query: 36 AYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT 95
AYA G + + LF + D+ +TA I+ S N + A +L+ Q+L + PN+FT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM 145
SS+LK+ K G+ +H LK+G + YV + L+D+YA+ FD+M
Sbjct: 133 FSSLLKSCST-----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 146 DD---------------------AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ A LF ++ ++ VSWN +I G+A+ AL F
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 185 EMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
++L EG +P + + +A + G+LE G+W+H V S +L V L+DMY+K
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCV 302
GS+E+A VFN ++D+V+WN+M+ G A HG + +R F +M G+ P +TF+
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 303 LTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L AC+HAGL++EG F M +++G++P+ HY V LLGRAG L RA + I+ M ++
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ +W ++LG+C++H + LG AE + L+ +SG ++LL+NIYAS G A+ R
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+MKE G+ KEP S +E +N VH F A D H + I+ R+ISE+IK GYVP+++
Sbjct: 488 LMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNT 547
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL ++ E+E LQVHSE+LA+A+ LIST PGS + I KN+RVC DCH+ K SK+
Sbjct: 548 VLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITG 607
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+I++RD NRFHHF DG CSCGD+W
Sbjct: 608 RKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 18/264 (6%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKP 91
++ YAK G ++ AR LFD M +D+V+W +I GY+Q+ P +A++LF ++L G KP
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 92 NQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
++ T+ + L A S GA + GR +H F NV V + L+DMY++ +++A
Sbjct: 258 DEITVVAALSACSQIGALET--GRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTG 209
+F K+ V+WNA+IAG+A + ALR F+EM G +PT ++ A A G
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNT-----LVDMYAKSGSIEDA-EKVFNRLLKRDVVS 263
+ +G + +S GQ LV + ++G ++ A E + N + D V
Sbjct: 376 LVNEG----IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
Query: 264 WNSMLTGCAQHG---LGKATVRWF 284
W+S+L C HG LGK +
Sbjct: 432 WSSVLGSCKLHGDFVLGKEIAEYL 455
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L+ R +H + S + ++ + +++ Y+KCG L+EA +F++ P KD+V W
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
A+I+GY+ + ++A+ LF++M + GL+P T L+A ++ R +
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+YG + L+ + R Q+ A+
Sbjct: 389 QEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
>gi|222618959|gb|EEE55091.1| hypothetical protein OsJ_02835 [Oryza sativa Japonica Group]
Length = 575
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/567 (39%), Positives = 322/567 (56%), Gaps = 26/567 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIA-----MQNTILNAYAKCGCLDEARKLFDEMPVK-DMV 59
+ L + + +H H+L + A + + +L YA+C ++ F ++P
Sbjct: 29 RALPKGQQLHGHLLKAGHLPATASSHAPIAHHLLTFYARCALPGDSLCAFLDLPAPPSPA 88
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W++LIS +SQN P A F +ML A+G ATD R + +
Sbjct: 89 AWSSLISSFSQNGLPAAAFDAFRRML----------------AAGVPATD----RNIPSA 128
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ +V+VGSS+LDMYA+ + DA LF + +N VSW+ALI G+A A
Sbjct: 129 AKGTPFAGDVFVGSSVLDMYAKCGHLADARRLFDEMPKRNVVSWSALICGYADAGMHSAA 188
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ F L E F+ S + A+ E G VHA IK+ FVG++LV +
Sbjct: 189 MEIFRLALEEAVPVNDFTVSCILRVCAAATLFELGAQVHARSIKTALNASPFVGSSLVSL 248
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G +E A +VF +R++ WN+ L AQHG A + F M G PN +TF
Sbjct: 249 YSKCGLVECAYQVFGEAPERNLGIWNAGLNASAQHGHTTAAFQRFMDMQNAGFRPNSITF 308
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
L ++TACSHAGL+DEG+ YF+LMK++ +EP+ HY VDLLGR G + AL I MP+
Sbjct: 309 LSLITACSHAGLVDEGKRYFSLMKEYRIEPQAEHYAAMVDLLGRVGRISEALGLIESMPM 368
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
EP VWGALL ACRM K+ + A AA+R+FE SG H+LL++ YA+AGR DAA A
Sbjct: 369 EPPEYVWGALLMACRMFKDADAAAIAAKRLFETGSRSSGAHMLLSSTYAAAGRHMDAALA 428
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK M+++GV+KE SW+E VH FV+N HP+ I+ ++ EK++ GYV D+
Sbjct: 429 RKAMRDAGVRKETGLSWLEAAGEVHTFVSNCRRHPRSNEIYNVLEKVGEKMEAAGYVADT 488
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S V+ D+ E++A ++ HSE+LA+ L+ P G I + KN+RVC DCH+A K+ SK
Sbjct: 489 SAVVKDVDKDEKQATMRYHSERLAIGLGLLIVPEGVPIRVMKNLRVCDDCHNAVKYLSKC 548
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R +I+RD RFH F DG CSCGD+W
Sbjct: 549 TGRIVILRDNRRFHRFEDGVCSCGDFW 575
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 26/180 (14%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSG-----GQLVAFVGNTLVDMYAKSGSIEDAEK 251
S + + AL++ +L +G+ +H H++K+G A + + L+ YA+ D+
Sbjct: 17 SLADLLVALSAARALPKGQQLHGHLLKAGHLPATASSHAPIAHHLLTFYARCALPGDSLC 76
Query: 252 VFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
F L +W+S+++ +Q+GL A F +ML G+ AG
Sbjct: 77 AFLDLPAPPSPAAWSSLISSFSQNGLPAAAFDAFRRMLAAGVPATDRNIPSAAKGTPFAG 136
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G + +D+ + G L A + EMP + W AL+
Sbjct: 137 DVFVGS-------------------SVLDMYAKCGHLADARRLFDEMP-KRNVVSWSALI 176
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 334/566 (59%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ ++ E H + L S ++N ++ Y++ + A ++ E+P D+ ++
Sbjct: 139 CSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSY 198
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G +N P A+ + +M+ + + T + + D + G QVH
Sbjct: 199 NIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC-SHLKDLRLGLQVHCRMF 257
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G +++ +V S+++DMY + + +A +F L++KN VSW A++A +++ E+AL
Sbjct: 258 RTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALN 317
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM +G P ++++ + + A +L GK +H + KSG + VGN L++MY+
Sbjct: 318 FFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYS 377
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSGSIE A KVF ++ RD ++W++M+ G + HGLG+ + F++ML P+ VTF+
Sbjct: 378 KSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVG 437
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+H G + EG Y LMK+ G+EP HY V LL +AG LD A F++ P++
Sbjct: 438 VLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVK 497
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
W LL AC +H+N LG AE + ++DP D G +ILL+N+YA A R + + R
Sbjct: 498 WDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIR 557
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+M+E VKKEP SW+E +N++H+FV+ HP+ I++K +E+ I+ +GYVPD +
Sbjct: 558 KLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIA 617
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V + +++ + HSEKLA+A+ L+ TP G+ I + KN+R+C DCHSA K SKV
Sbjct: 618 AVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVT 677
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFH F DG CSC DYW
Sbjct: 678 NRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 220/437 (50%), Gaps = 17/437 (3%)
Query: 6 KKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
K LK +++HAH++ A K++I N+++N YAKC + AR LFD M +++V+W A
Sbjct: 39 KNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGA 98
Query: 64 LISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCL 121
L++GY N + LF M+ + ++PN++ ++++ + S +G + G Q H + L
Sbjct: 99 LMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVE--GWQCHGYAL 156
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ YV ++L+ MY+R + A ++ + + S+N +I G +AL
Sbjct: 157 KSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALE 216
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M+ E + +Y + F + L G VH + ++G + +FV + ++DMY
Sbjct: 217 VLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYG 276
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G+I +A KVFNRL ++VVSW ++L +Q+G + + +F +M +G+ PN+ TF
Sbjct: 277 KCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAV 336
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+L +C+ L G+ +KK G E +++ ++G ++ A K EM I
Sbjct: 337 LLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEM-ICR 395
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIYASAGRLNDAARA- 419
+ W A++ H LG A E+ PH + + ++ L
Sbjct: 396 DSITWSAMICGLSHHG---LGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGF 452
Query: 420 ---RKMMKESGVKKEPA 433
++MK++G+ EP
Sbjct: 453 YYLNQLMKQTGI--EPG 467
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 138/285 (48%), Gaps = 6/285 (2%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCL--KYGYDWNVYVGSSLLDMYARFDQMDDA 148
P + T+ +LK S A + KFG+ +HA + N+ +SL+++YA+ DQ+ A
Sbjct: 24 PLEHTIQ-LLKVS-ADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVA 81
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALAS 207
LF + +N VSW AL+AG+ + LR F M+ + P + ++++ ++ +
Sbjct: 82 RILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSD 141
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
+G + +G H + +KSG +V N L+ MY++ ++ A V+ + DV S+N +
Sbjct: 142 SGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNII 201
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+ G ++G + ++M+ I + VT++ CSH L G M + G
Sbjct: 202 INGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGA 261
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E + +D+ G+ G + A K + + + W A+L A
Sbjct: 262 EYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVS-WTAILAA 305
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 343/597 (57%), Gaps = 34/597 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L+ V+ I S + + M + +++ Y KC +D A++LFDE ++
Sbjct: 245 CAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLC 304
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ S Y + + A+ + + M+ G++P++ ++ S + +S + + +G+ H + L
Sbjct: 305 NAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAI-SSCSQLRNILWGKSCHGYVL 363
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ + ++L+DMY + + D A+ +F + +K V+WN+++AG+ E + A
Sbjct: 364 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWE 423
Query: 182 TFS--------------------EMLREGFEPTHFSYS------------SVFTALASTG 209
TF+ M E E H+ S S+ +A G
Sbjct: 424 TFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLG 483
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+L+ KW++ ++ K+ QL +G TLVDM+++ G E A +FN L RDV +W + +
Sbjct: 484 ALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 543
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVE 328
A G + + F +M+ G+ P+ V F+ LTAC H GL+ +G+ F M+K HGV
Sbjct: 544 AMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVS 603
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
PE+ HY VDLLGRAGLL+ AL+ I++MP EP +W +LL ACR+ NVE+ A+AAE+
Sbjct: 604 PEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEK 663
Query: 389 IFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVA 448
I L P +G ++LL+N+YASAGR ND A+ R MKE G++K P S ++ + H F +
Sbjct: 664 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTS 723
Query: 449 NDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D++HP+ I E+S++ +G+VPD S+VL D+QE+ L HSEKLA+AF L
Sbjct: 724 GDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGL 783
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
IS+ G+TI I KN+RVC CHS KFASKV REII+RD NRFH R G CSC D+
Sbjct: 784 ISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 198/400 (49%), Gaps = 35/400 (8%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H I+ + D+ +QN++++ YA+CG LD ARK+FDEM +++V+WT++I GY++ +
Sbjct: 155 IHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREF 214
Query: 74 PENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
++A+ LF +M+R + PN T+ V+ A A D + G +V+ F G + N +
Sbjct: 215 AKDAVDLFFRMVRDEDVIPNSVTMVCVISAC-AKLEDLETGEKVYDFIRDSGIEVNDLMI 273
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+L+DMY + + +D A LF + N NA+ + + R+ ++AL + M+ G
Sbjct: 274 SALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIR 333
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P S S ++ + ++ GK H +V+++G + + N L+DMY K + A ++
Sbjct: 334 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 393
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP------------------ 294
F+R+ + VV+WNS++ G ++G A F M I
Sbjct: 394 FDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAI 453
Query: 295 --------------NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ VT + + +AC H G LD + + ++K+ ++ + T VD+
Sbjct: 454 EVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDM 513
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
R G + A+ + +A W A +GA M NVE
Sbjct: 514 FSRCGDPESAMSIFNSLTNRDVSA-WTAAIGAMAMAGNVE 552
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 179/374 (47%), Gaps = 7/374 (1%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGC---LDEARKLFDE-MPVKDMV 59
+ K + E ++ H + +D++ ++ + G L A+++F+
Sbjct: 40 NCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCF 99
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+ +LI GY+ + + AI+LF +M+ G+ P+++T L A + D G Q+H
Sbjct: 100 MYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVC-AKSRDKGNGIQIHGL 158
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K Y +++V +SL+ YA ++D A +F + +N VSW ++I G+AR+ + A
Sbjct: 159 IIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDA 218
Query: 180 LRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ F M+R E P + V +A A LE G+ V+ + SG ++ + + LVD
Sbjct: 219 VDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVD 278
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K +I+ A+++F+ ++ N+M + + GL K + M+ +GI P++++
Sbjct: 279 MYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS 338
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
L +++CS + G+ + ++G E + +D+ + D A + M
Sbjct: 339 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 398
Query: 359 IEPTAAVWGALLGA 372
T W +++
Sbjct: 399 -NKTVVTWNSIVAG 411
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/482 (41%), Positives = 298/482 (61%), Gaps = 6/482 (1%)
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
L P +S+L++ A K G+Q+HA G+ ++ + + L+++Y D + A
Sbjct: 71 LTPTYSNYASLLQSCIARKAI-KPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSA 129
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
LF + N WN LI G+A E A++ + +M G P +F++ V A A+
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD---VVSWN 265
++E G+ +H HV+++G + FVG L+DMYAK G + A +VF+++L RD VVSWN
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKK 324
+M+TG A HG + FE+M R P+ +TF+ VL+ACSH GLL+EG +F +++
Sbjct: 250 AMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 308
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ ++P HY VDLLG +G LD A I +M + P + VWGALL +C++H NVELG
Sbjct: 309 YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEI 368
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
A ER+ EL+P D+G +++L+NIYA AG+ A+ RK+M + +KK ACSW+E KN VH
Sbjct: 369 ALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVH 428
Query: 445 MFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F++ D +HP I+ + + +K+ GY P + V + E+ + HSE+LA+
Sbjct: 429 AFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAI 488
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
AF LISTPPG+ + I KN+R+C DCH A KF SK+ EREI VRD NR+HHF+DG CSCGD
Sbjct: 489 AFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGD 548
Query: 565 YW 566
YW
Sbjct: 549 YW 550
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 15/283 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K +K + +HA + + F D + ++N Y C L AR LFD +P ++ W
Sbjct: 85 CIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLW 144
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI GY+ N E A+ L+ QM GL P+ FT VLKA A + + GR++H +
Sbjct: 145 NVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEH-GREIHEHVV 203
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE---VSWNALIAGHARKSEGEK 178
+ G++ +V+VG++L+DMYA+ + A +F + ++ VSWNA+I G+A +
Sbjct: 204 QTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATE 263
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TL 236
AL F EM R +P H ++ V +A + G LE+G W+ + ++ V + +
Sbjct: 264 ALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEG-WMFFETMIRDYKIDPTVQHYTCM 321
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVS----WNSMLTGCAQHG 275
VD+ SG +++A +N +++ V+ W ++L C H
Sbjct: 322 VDLLGHSGRLDEA---YNLIMQMKVLPDSGVWGALLNSCKIHA 361
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 332/573 (57%), Gaps = 10/573 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L R +H + + F + N+I++ Y+KCG ++EA +F+ MPV+++++W
Sbjct: 83 CGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISW 142
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I+GY+ E A++LF +M +G ++FT +S LKA S GA K G Q+HAF
Sbjct: 143 NAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAI--KEGNQIHAFL 200
Query: 121 LKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G Y N V +L+D+Y + ++ A +F+ +E K+ +SW ALI G+A++ +
Sbjct: 201 ITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAE 260
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
++ F ++ + F SS+ A ++QGK +HA IK + V N+++D
Sbjct: 261 SMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILD 320
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K G I +AE++F+ + R+V+SW M+TG +HGLGK +R F++M + P+ VT
Sbjct: 321 MYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVT 380
Query: 299 FLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+L VL CSH+GL+++GQ YF+ L HG++ HY VDLLGRAG L A + M
Sbjct: 381 YLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSM 440
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+E +W LL ACR+H ++ELG + LD + +++++NIYA AG +
Sbjct: 441 PLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECE 500
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK-QIGYV 476
R R+++K +KKE SWVE VH F DD HP IH+ +E+ ++K ++GYV
Sbjct: 501 RIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYV 560
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALIS---TPPGSTIHIKKNIRVCGDCHSAF 533
+ L +++ + L+VHSEKLA+ AL+ I + KN+RVCGDCH
Sbjct: 561 YGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFI 620
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK++ +VRD NRFH F DG CSC DYW
Sbjct: 621 KGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 192/342 (56%), Gaps = 9/342 (2%)
Query: 22 AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILF 81
F D+ + N ++ Y KCG L A +FD M +++V+WTAL+ G+ QN P +++LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 82 SQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
S+M G+KPN FT S+ LKA G D GRQ+H C+K G+D VG+S++DMY++
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLD-IGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
++++A +F + +N +SWNA+IAG+ EKAL F +M G F+++S
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAF---VGNTLVDMYAKSGSIEDAEKVFNRLLK 258
A + G++++G +HA +I +GG L + V L+D+Y K G + A +VF+ + +
Sbjct: 181 LKACSDLGAIKEGNQIHAFLI-TGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
+ V+SW +++ G AQ G ++ F ++ + I + ++ + L+ +G+
Sbjct: 240 KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299
Query: 319 --FALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
FA+ GV+ + + +D+ + G+++ A + EMP
Sbjct: 300 HAFAIKVPSGVDISVCN--SILDMYLKCGMINEAERLFSEMP 339
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 3/249 (1%)
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ +++ + + L+ MY + ++ A +F + +N VSW AL+ GH + ++L F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
S+M G +P F++S+ A L+ G+ +H +K+G +V VGN+++DMY+K
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G I +A +F + R+++SWN+M+ G G + + F+KM G ++ TF L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 304 TACSHAGLLDEGQGYFALMKKHGV--EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
ACS G + EG A + G A +DL + G L A + + E
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE-EK 240
Query: 362 TAAVWGALL 370
W AL+
Sbjct: 241 HVISWTALI 249
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/566 (37%), Positives = 326/566 (57%), Gaps = 1/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L R +HA IL + +N + + N++L Y+KC +++ ++F+ MP D+V+
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L GY+ + NA+ +FS M G+KPN T+ ++ + +G +HA+
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + Y+ +SL+ MYA ++ + +F+ + +K+ +SWNA+IA + R GE+A++
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIK 537
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F + G + F + ++ A+ SLE+G +H +K+G + V N +DMY
Sbjct: 538 LFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYG 597
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ K R WN++++G A++G K F+ M+ G P+ VTF+
Sbjct: 598 KCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVA 657
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSHAGL+D+G Y+ ++ GV P H V VDLLGR G A KFI EMP+
Sbjct: 658 LLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVL 717
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W +LL + R HKN+++G AA+ + ELDP D ++LL+N+YA+ R D + R
Sbjct: 718 PNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLR 777
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MK + K PACSW++ KN V F D +H I+ K EI K++++GYV D+S
Sbjct: 778 SHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTS 837
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D++++E L HSEKLALA+ L+ P GSTI I KN+RVC DCH FK S V
Sbjct: 838 SALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVF 897
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI++RD RFH F+ G CSC D+W
Sbjct: 898 HREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 174/346 (50%), Gaps = 12/346 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V AH++ S +++ N+++ + + +A +LFD M +D ++W A+IS YS +
Sbjct: 167 VTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEV 226
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
I+ S M +KP+ TL S++ A + G +H+ C+ G +V + +
Sbjct: 227 YSKCFIVLSDMRHGEVKPDVTTLCSLVSVC-ASSDLVALGSGIHSLCVSSGLHCSVPLIN 285
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR--EGF 191
+L++MY+ ++D+A LF + ++ +SWN +I+ + + + +AL T ++L+ EG
Sbjct: 286 ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG- 344
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
P ++SS A +S +L G+ +HA +++ Q V +GN+L+ MY+K S+ED E+
Sbjct: 345 PPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTER 404
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
VF + DVVS N + G A +R F M GI PN +T + + C G
Sbjct: 405 VFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGD 464
Query: 312 LDE-GQGYFALMKKHGVEPEE-------AHYVTFVDLLGRAGLLDR 349
L G A + + G+ +E Y T DL G+ R
Sbjct: 465 LHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSR 510
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 180/374 (48%), Gaps = 14/374 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + ++ + +L+ Y G + A++LF EMP +++V+WTA++ S N
Sbjct: 66 IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A++ + +M + G+ N L++V+ GA D+ G QV A + G +V V +
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGA-LEDEVAGLQVTAHVVVSGLLTHVSVAN 184
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ M+ ++ DA LF +E ++ +SWNA+I+ ++ + K S+M +P
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKP 244
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ S+ + AS+ + G +H+ + SG + N LV+MY+ +G +++AE +F
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLF 304
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA-PNQVTFLCVLTACSHAGLL 312
+ +RDV+SWN+M++ Q + ++L+ PN +TF L ACS L
Sbjct: 305 RNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEAL 364
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G+ A++ + ++ + + + + ++ + MP +
Sbjct: 365 MNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC------- 417
Query: 373 CRMHKNVELGAYAA 386
NV G YAA
Sbjct: 418 -----NVLTGGYAA 426
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 161/358 (44%), Gaps = 24/358 (6%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-------SGA 105
MP + +W +SG ++ A L M + + F L+S++ A GA
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 106 GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA 165
G +HA + G NVY+G++LL +Y + +A LF + +N VSW A
Sbjct: 61 AC-----GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTA 115
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ---GKWVHAHVI 222
++ + E+AL + M +EG + +++ T ++ G+LE G V AHV+
Sbjct: 116 IMVALSSNGCMEEALVAYRRMRKEG---VMCNANALATVVSLCGALEDEVAGLQVTAHVV 172
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
SG V N+L+ M+ ++DAE++F+R+ +RD +SWN+M++ + +
Sbjct: 173 VSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFI 232
Query: 283 WFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLG 342
M + P+ T +++ C+ + L+ G G +L G+ V++
Sbjct: 233 VLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYS 292
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGA-CRMHKNVELGAYAAERIFELDPHDSGP 399
AG LD A R M + W ++ + + + VE A E + +L D GP
Sbjct: 293 TAGKLDEAESLFRNMSRRDVIS-WNTMISSYVQSNSCVE----ALETLGQLLQTDEGP 345
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/529 (38%), Positives = 320/529 (60%), Gaps = 4/529 (0%)
Query: 41 GCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVL 100
G + AR+LFDEM W ++ GY +N P+ A+ ++ +M LG++P+ FT V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 101 KASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE 160
KA A + G +H +K+G ++ V + L+ MY +F ++ A FLF ++ ++
Sbjct: 143 KAC-AELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDL 201
Query: 161 VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAH 220
V+WNALIA + KAL++F EM G +P + S +A G LE G+ ++
Sbjct: 202 VAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEF 261
Query: 221 VIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKAT 280
+ G V N +DM AK G ++ A +F+ + +R+V+SW++++ G A +G +
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKA 321
Query: 281 VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK---HGVEPEEAHYVTF 337
+ F +M G+ PN VTFL VL+ACSH G ++EG YF M + ++P + HY
Sbjct: 322 LALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACM 381
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDS 397
VDLLGR+G L+ A FI+ MPIE +WGALLGAC +H+N++LG + A+ +FEL P +
Sbjct: 382 VDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIA 441
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRA 457
H+LL+N+YA+AGR + + R+ MK+ G +K A S VE +H+ D +HPQ A
Sbjct: 442 SYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSA 501
Query: 458 MIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTI 517
I K ++ +++K +GY+P++ V + +E+E+ L HSEKLA+AF+LI+ P I
Sbjct: 502 SILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPI 561
Query: 518 HIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ KN+R+CGDCH+ K S++ REII+RD NRFHHF++G CSC D+W
Sbjct: 562 RVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 5/277 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +L +H H++ + A++ ++ Y K G L A LF M +D+V W
Sbjct: 145 CAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAW 204
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI+ Q A+ F +M G+KP+ T+ S L A G + G +++ F
Sbjct: 205 NALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLET-GEEIYEFAR 263
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G D N+ V ++ LDM A+ MD A LF + +N +SW+ +I G+A E EKAL
Sbjct: 264 EEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALA 323
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN---TLVD 238
FS M +G +P + ++ +V +A + TG + +G + +S + + +VD
Sbjct: 324 LFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVD 383
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+ +SG +E+A + ++ D W ++L CA H
Sbjct: 384 LLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/565 (38%), Positives = 327/565 (57%), Gaps = 19/565 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A VH ++ + +D+ + + +++ YAK G L EA LF + ++V + +I+G+ +
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 71 NDQ------PENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKY 123
+ A+ L+S++ G++P +FT SSVL+A AG + FG+Q+H +KY
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLE--FGKQIHGQVIKY 348
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ + ++GS+L+D+Y M+D + F + + V+W A+++G + EKAL F
Sbjct: 349 TFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF 408
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
E L G +P F+ SSV A AS G+ + KSG +GN+ V MYA+S
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G ++ A + F + DVVSW+++++ AQHG + + +F++M+ + PN++TFL VL
Sbjct: 469 GDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
TACSH GL+DEG Y+ M K +G+ P H VDLLGRAG L A FI
Sbjct: 529 TACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHAD 588
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W +LL +CR+H+++E G A RI EL+P S +++L N+Y AG L+ A++ R +
Sbjct: 589 PVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDL 648
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK+ GVKKEP SW+E K VH FVA D +HP+ + I+ K E+ +I+++
Sbjct: 649 MKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTD----- 703
Query: 483 LSYADQQEREAKL-QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
+ +RE L HSEKLA+A +I P + I + KN+RVC DCHS K SK
Sbjct: 704 ---TEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSEN 760
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD RFHHFRDG CSC DYW
Sbjct: 761 REIILRDPIRFHHFRDGSCSCADYW 785
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 197/376 (52%), Gaps = 8/376 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ R VHA + + + + N++++ Y+KCG + EAR++FD +D V+W
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAFC 120
+L+SGY + E + +F+ M R G+ N F L SV+K SG G VH
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCV 238
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR------KS 174
+K G D +V++ S+++DMYA+ + +A LF +++ N V +N +IAG R K
Sbjct: 239 IKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKE 298
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+AL +SE+ G +PT F++SSV A G LE GK +H VIK Q F+G+
Sbjct: 299 VASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGS 358
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+D+Y SG +ED + F K D+V+W +M++GC Q+ L + + F + L G+ P
Sbjct: 359 ALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKP 418
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ T V+ AC+ + G+ K G + + V + R+G +D A +
Sbjct: 419 DLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRF 478
Query: 355 REMPIEPTAAVWGALL 370
+EM + W A++
Sbjct: 479 QEMESHDVVS-WSAVI 493
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 187/354 (52%), Gaps = 12/354 (3%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
++NT+L AY + G AR+L DEMP ++ V++ LI YS+ ++ ++ R G
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104
Query: 89 LKPNQFT-LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
+ ++F+ +++ S AG + GR VHA + G V+V +SL+ MY++ +M +
Sbjct: 105 VDVDRFSYAAALAACSRAGHL--RAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA- 206
A +F E +++VSWN+L++G+ R E+ +R F+ M R G F+ SV +
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 207 -STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G+++ + VH VIK+G F+ + ++DMYAK G++ +A +F + + +VV +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 266 SMLTG-C-AQHGLGKAT----VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+M+ G C + +GK + + ++ G+ P + TF VL AC+ AG L+ G+
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ K+ + ++ +DL +G ++ + R P + W A++ C
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 22/340 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + +H ++ F+ D + + +++ Y GC+++ + F P D+VTW
Sbjct: 329 CNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTW 388
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++SG QN+ E A+ LF + L GLKP+ FT+SSV+ A + A + G Q+ F
Sbjct: 389 TAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAV-ARAGEQIQCFAT 447
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D +G+S + MYAR +D A F +ES + VSW+A+I+ HA+ AL
Sbjct: 448 KSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALH 507
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F EM+ P ++ V TA + G +++G + + K G T +VD+
Sbjct: 508 FFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLL 567
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
++G + DAE + N + D V W S+L C H + R + N++
Sbjct: 568 GRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH----------RDLERGQLVANRIME 617
Query: 300 LCVLTACSHAGL----LDEGQGYFA-----LMKKHGVEPE 330
L ++ S+ L LD G+ A LMK+ GV+ E
Sbjct: 618 LEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKE 657
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++++ ++LL Y R A L + +N VS+N LI ++R+ +L T +
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R G + FSY++ A + G L G+ VHA I G FV N+LV MY+K G +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A +VF+ +RD VSWNS+++G + G + VR F M R G+ N V+ CS
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221
Query: 308 HA--GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
G +D + + K G++ + +D+ + G L A R + EP +
Sbjct: 222 GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVM 280
Query: 366 WGALL-GACR 374
+ ++ G CR
Sbjct: 281 FNTMIAGFCR 290
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 331/574 (57%), Gaps = 33/574 (5%)
Query: 17 HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
HI + I N+++ + G + EA KLFDEM KDMVTW+ALI+ + QN+ E
Sbjct: 300 HIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 359
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
AI F M ++G+ ++ S L A A G+ +H+ LK G + + + ++L+
Sbjct: 360 AIRTFVGMHKIGVMVDEVVAVSALSAC-ANLLVVNMGKLIHSLSLKIGTESYINLQNALI 418
Query: 137 DMYAR----------FDQ---------------------MDDAWFLFTALESKNEVSWNA 165
MY++ FD+ +D+A +F ++ K+ VSW++
Sbjct: 419 YMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSS 478
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+I+G+A+ ++ L F EM GF+P + SV +A A +LEQGKWVHA++ ++G
Sbjct: 479 MISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNG 538
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
+ +G TL+DMY K G +E A +VF ++++ + +WN+++ G A +GL ++++ F
Sbjct: 539 LTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFS 598
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRA 344
M + + PN++TF+ VL AC H GL+DEGQ +F +++ H ++P HY VDLLGRA
Sbjct: 599 NMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRA 658
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
G L A + + MP+ P A WGALLGAC+ H + E+G ++ EL P G H+LL+
Sbjct: 659 GKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLS 718
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
NIYAS G+ +D R MM + V K P CS +E +H F+A D HP I
Sbjct: 719 NIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLV 778
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
E++ K+K GY PD + VL D++E+E+ L HSEKLA+AF LI+ P + I I KN+R
Sbjct: 779 EMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLR 838
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
+C DCH+A K SK R+I+VRD +RFHHF G
Sbjct: 839 ICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 171/322 (53%), Gaps = 14/322 (4%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
+V + A+ D+ N++++ Y KC +D A+ +FD MP KD+V+W+++ISGY+QND
Sbjct: 428 MVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQND 487
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ + LF +M G KP++ TL SV+ A A ++ G+ VHA+ + G NV +G
Sbjct: 488 LFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ-GKWVHAYIKRNGLTINVILG 546
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++L+DMY + ++ A +F + K +WNALI G A E +L FS M +
Sbjct: 547 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 606
Query: 193 PTHFSYSSVFTALASTGSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
P ++ V A G +++G+ +H H I+ V G +VD+ ++G ++
Sbjct: 607 PNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPN---VKHYG-CMVDLLGRAGKLQ 662
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+AE++ NR+ + DV +W ++L C +HG + R K++ + P+ F +L+
Sbjct: 663 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLSNI 720
Query: 307 -SHAGLLDEGQGYFALMKKHGV 327
+ G D+ +M KH V
Sbjct: 721 YASKGKWDDVLEIRGMMTKHRV 742
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
Y Q + P A L+ ML L + +T +++A ++ + +QVH LK G+D
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWE-AKQVHNHVLKLGFD 245
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+VYV ++L++ ++ M DA +F + VSWN+++AG+
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE-------------- 291
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G++E+ K H+ + N+++ ++ G +
Sbjct: 292 ---------------------IGNVEEAK----HIYHQMPERSIIASNSMIVLFGMRGLV 326
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+A K+F+ +L++D+V+W++++ Q+ + + +R F M + G+ ++V + L+AC
Sbjct: 327 VEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSAC 386
Query: 307 SHAGLLDEGQGYFALMKKHGVE 328
++ +++ G+ +L K G E
Sbjct: 387 ANLLVVNMGKLIHSLSLKIGTE 408
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L++ + VHA+I + ++ + T+++ Y KCGC++ A ++F M K + TW
Sbjct: 518 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 577
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G + N E+++ +FS M + + PN+ T VL A D+ ++
Sbjct: 578 NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 637
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAGHARKSEGEKAL 180
+ NV ++D+ R ++ +A L + +V +W AL+ + + E
Sbjct: 638 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGR 697
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
R +++ +P H F L S +GKW
Sbjct: 698 RVGRKLIE--LQPDH----DGFHVLLSNIYASKGKW 727
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 35/189 (18%)
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A + ML +++Y + A + S + K VH HV+K G +V NTL++
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 239 M-------------------------------YAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
Y + G++E+A+ +++++ +R +++ NSM
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 316
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+ GL + F++ML + VT+ ++ + +E F M K GV
Sbjct: 317 IVLFGMRGLVVEACKLFDEMLEK----DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 372
Query: 328 EPEEAHYVT 336
+E V+
Sbjct: 373 MVDEVVAVS 381
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 348/566 (61%), Gaps = 5/566 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L ++ A+ VH + F+ ++ ++ +++ Y+K GC+ AR+LF+ M +++VTW A
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNA 193
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLK 122
++SGYS + E AI LF+ M R GL + +T+ S++ AS G + G +H F ++
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL--QVGTGIHGFIIR 251
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GY+ + ++ ++L+D+Y + +DDA +F+ + K+ +W ++ G + ++A++
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKH 311
Query: 183 FSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++ML + + + + ++ + +G+L+QG+ VHA IK+ FVG+ ++DMYA
Sbjct: 312 FNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
G++EDA++ F + ++DVV WN+M+ G +G G + F +M +G+ P++ TF+
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 302 VLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSHAG++ EG Q ++ ++K V P HY +D+LGRAG LD A FI MP +
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P V+ LLGACR+H N++LG +++IFE++P+D+G ++LL+N+YA AG R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++ +KK+P S +E ++ F+A + HPQ I + + KIK+ GYVP+++
Sbjct: 552 ASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L ++ L HSEK+A+AF L+ T P + I I KN+R C DCH+A KF SKV
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVF 671
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R ++++D NRFH F+DG CSC DYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 203/373 (54%), Gaps = 3/373 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
LK LK + +HA I+ S ++ + N+++NAY CG L +A+++F P K++V+WT L
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISG ++ND AI +F +M+ KPN T+SSVL A A + + VH F ++ G
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAF-ANLGLIRIAKSVHCFWVRGG 152
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ NV+V ++L+DMY++F M A LF ++ +N V+WNA+++G++ E+A+ F+
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M R+G ++ S+ A S G L+ G +H +I++G + + L+D+Y
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVL 303
++DA +VF+ + +DV +W MLTG + ++ F KML + + + + +L
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
++CSH+G L +G+ AL K +D+ G L+ A +F M E
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDV 391
Query: 364 AVWGALLGACRMH 376
W A++ M+
Sbjct: 392 VCWNAMIAGNGMN 404
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+H L++ R VHA + + F N+I + + +++ YA CG L++A++ F M KD+V W
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCW 394
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I+G N +AI LF QM GL P++ T SVL A S AG + G Q+
Sbjct: 395 NAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE--GLQIFYHM 452
Query: 121 LKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K + N+ + ++D+ R Q+D A+ + + + + + G R K
Sbjct: 453 VKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTAL-ASTGSLEQGKWVHA 219
S+ + E EP Y + + + A G+ E K A
Sbjct: 513 GHEISQKIFE-MEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 311/506 (61%), Gaps = 2/506 (0%)
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y ++ N++ +F+ M + + P+ T +VLKA+ A D G+ +H +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKAT-AQLCDTGVGKMIHGIVI 116
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ +VY ++L+ +Y + DA LF + +N V+WNALI G+ + KA+
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML +G +P+ + V +A + G+ QGKW+H + + +L FVG L+DMYA
Sbjct: 177 AFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ + EKVF + +++V +WN +++G A +G G A ++ F +ML P++VTFL
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC H GL+ EG+ F MK+ G++P HY VDLLGRAGLL+ AL+ I+ M IE
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W ALL ACR+H N +LG Y +R+ EL+P++ ++LL+NIY+ R + + R
Sbjct: 357 PDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLR 416
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MM G++K P CS +E N V+ FVA++D P+ I+K+ + +K+K+ GYV +
Sbjct: 417 GMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTD 476
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +++E+E + HSEKLALAF L+++P T+ I KN+R+C DCH FK S V
Sbjct: 477 MALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVY 536
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R I+VRD NRFHHF +GFCSC DYW
Sbjct: 537 KRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 151/279 (54%), Gaps = 10/279 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+++H ++ F D+ +++ Y C + +A +LFDEMP ++ VTW ALI+GY+
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTH 167
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
N + AI F ML G +P++ T+ VL A S GA + G+ +H F NV
Sbjct: 168 NRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQ--GKWIHEFIYHNRLRLNV 225
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VG++L+DMYA+ + + +F + KN +WN LI+G+A +G+ AL+ FS ML E
Sbjct: 226 FVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLME 285
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIE 247
F+P ++ V A G + +G+W + + G + G +VD+ ++G +E
Sbjct: 286 NFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYG-CMVDLLGRAGLLE 344
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVR 282
+A ++ + ++ D + W ++L C HG LG+ ++
Sbjct: 345 EALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIK 383
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
S N N++I + ++ +L F+ M + P ++ +V A A GK
Sbjct: 51 SINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKM 110
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H VI+ G + LV +Y SI DA ++F+ + +R+ V+WN+++TG +
Sbjct: 111 IHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRK 170
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ F ML +G P++ T + VL+ACSH G ++G+ + + +
Sbjct: 171 FVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTA 230
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+D+ + G + K E+ E W L+ M+ + A R+
Sbjct: 231 LIDMYAKCGAVYEVEKVFEEIR-EKNVYTWNVLISGYAMNGQGDAALQAFSRML 283
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+HL + + +H I + + ++ + +++ YAKCG + E K+F+E+ K++ TW
Sbjct: 200 CSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTW 259
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISGY+ N Q + A+ FS+ML KP++ T VL A + Q +
Sbjct: 260 NVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQ 319
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
++G + ++D+ R +++A L ++ + + W AL+ H GE
Sbjct: 320 QFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGE 379
Query: 178 KALRTFSEM 186
++ E+
Sbjct: 380 YIIKRLIEL 388
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 330/574 (57%), Gaps = 34/574 (5%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ T+++ AK G LD+AR+L PV+++VTWT LISGYS+ + A+ F+ ML
Sbjct: 170 DVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVH----------------------AFCLKY 123
G+ P++ T+ +L A G D FG +H A C
Sbjct: 230 SDGIAPDEVTVIGMLSACGQ-LKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDT 288
Query: 124 GYDWNVYVG----------SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
G V+ ++++D Y + +D A LF +E + +++N+LI G+
Sbjct: 289 GRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHG 348
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+AL F++M R G +F+ + TA AS G+L QG+ +HA + + + ++G
Sbjct: 349 GRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLG 408
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
L+DMY K G +E+A F ++ RDV +W++M+ G A +G+GKA + F M +G
Sbjct: 409 TALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFH 468
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALK 352
N VT++ VLTACSH+ LLDEG+ YF M+ H + P+ HY +DLLGR+GLLD A+
Sbjct: 469 ANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMD 528
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
++ MP++P A +W ++L ACR+HKNV+L AA + +L+P + ++ + NIY + +
Sbjct: 529 LVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQ 588
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
DA++ R++M++ GVKK S + VH F+ D +HPQ A I EI ++K
Sbjct: 589 WEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKS 648
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
GY P +S + D++E+E L HSEKLA+AF L+S P +HI KN+RVC DCHSA
Sbjct: 649 AGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSA 708
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K S++ REIIVRD +RFHHFR G CSC D+W
Sbjct: 709 IKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 165/394 (41%), Gaps = 65/394 (16%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A LFD MP + TAL + + + P+ IIL+ +M + + P+ FT + K
Sbjct: 53 LRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKC 112
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNV-YVGSSLLDMYAR----------FDQ------- 144
G GR +HA C + V + S ++ MYA FD+
Sbjct: 113 CARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVV 172
Query: 145 --------------MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
+DDA L +N V+W LI+G++R +A+ F+ ML +G
Sbjct: 173 AWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDG 232
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHV-----IKSGGQLVAFVG------------ 233
P + + +A L G +H V + S +VA +
Sbjct: 233 IAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAR 292
Query: 234 ---------------NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
N ++D Y K G ++ A +F+++ DV+++NS++TG G +
Sbjct: 293 EVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLR 352
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV 338
+ F KM R+G+ + T + +LTA + G L +G+ A +++ VE + +
Sbjct: 353 EALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALL 412
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
D+ + G ++ A+ ++M + W A++G
Sbjct: 413 DMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIGG 445
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L + R +HA I + D+ + +L+ Y KCG ++EA F +M V+D+ TW+A+
Sbjct: 383 LGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAM 442
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G + N + A+ F M G N T +VL A D+ L +
Sbjct: 443 IGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHN 502
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
+ ++D+ R +D+A L + + N V W ++++
Sbjct: 503 IRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILS 547
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/435 (44%), Positives = 280/435 (64%), Gaps = 1/435 (0%)
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++++ YA++ +D+A LF LE ++ + WN +I G+A+ + L F +ML
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P + +V +A TG+LE G+WVH+++ +G + VG +L+DMY+K GS+EDA V
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F R+ +DVV+WNSM+ G A HG + +R F++M G P +TF+ VL ACSHAGL+
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 313 DEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
EG +F MK ++G+EP+ HY V+LLGRAG L+ A + ++ M I+ +WG LLG
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
ACR+H N+ LG AE + + +SG ++LL+NIYA+AG AR R +MKESG +KE
Sbjct: 250 ACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKE 309
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
P CS +E N VH F+A D HP+ I++ EI+ +K GY P + VL + ++
Sbjct: 310 PGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQK 369
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
E L VHSEKLALAF LI+T PG+TI I KN+RVC DCH+ K SK+ R++++RD NR
Sbjct: 370 ERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNR 429
Query: 552 FHHFRDGFCSCGDYW 566
FHHF +G CSCGDYW
Sbjct: 430 FHHFVNGLCSCGDYW 444
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 164/301 (54%), Gaps = 6/301 (1%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++ YAK G +DEAR LFD + +D + W +I GY+Q+ P ++LF QML ++PN
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71
Query: 93 QFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFL 151
+ T+ +VL A G GA + GR VH++ G NV VG+SL+DMY++ ++DA +
Sbjct: 72 EVTVLAVLSACGQTGALET--GRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + +K+ V+WN+++ G+A + ALR F EM G++PT ++ V A + G +
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 212 EQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLT 269
+G K+ ++ + G + +V++ ++G +E+A E V N + +D V W ++L
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
C HG + E ++ +A N T++ + + AG + LMK+ G E
Sbjct: 250 ACRLHGNIALGEQIAEYLVSQNLA-NSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEK 308
Query: 330 E 330
E
Sbjct: 309 E 309
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ R VH++I + ++ + ++++ Y+KCG L++AR +F+ + KD+V W
Sbjct: 82 CGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAW 141
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++ GY+ + ++A+ LF +M +G +P T VL A + + ++
Sbjct: 142 NSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKD 201
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
+YG + V ++++ R +++A+ L +E ++ V W L+ H + GE
Sbjct: 202 EYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGE 261
Query: 178 K 178
+
Sbjct: 262 Q 262
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 311/506 (61%), Gaps = 2/506 (0%)
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y ++ N++ +F+ M + + P+ T +VLKA+ A D G+ +H +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKAT-AQLCDTGVGKMIHGIVI 116
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ +VY ++L+ +Y + DA LF + +N V+WNALI G+ + KA+
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F ML +G +P+ + V +A + G+ QGKW+H + + +L FVG L+DMYA
Sbjct: 177 AFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ + EKVF + +++V +WN +++G A +G G A ++ F +ML P++VTFL
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC H GL+ EG+ F MK+ G++P HY VDLLGRAGLL+ AL+ I+ M IE
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W ALL ACR+H N +LG Y +R+ EL+P++ ++LL+NIY+ R + + R
Sbjct: 357 PDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLR 416
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MM G++K P CS +E N V+ FVA++D P+ I+K+ + +K+K+ GYV +
Sbjct: 417 GMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTD 476
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L +++E+E + HSEKLALAF L+++P T+ I KN+R+C DCH FK S V
Sbjct: 477 MALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVY 536
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R I+VRD NRFHHF +GFCSC DYW
Sbjct: 537 KRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 151/279 (54%), Gaps = 10/279 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+++H ++ F D+ +++ Y C + +A +LFDEMP ++ VTW ALI+GY+
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTH 167
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
N + AI F ML G +P++ T+ VL A S GA + G+ +H F NV
Sbjct: 168 NRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQ--GKWIHEFIYHNRLRLNV 225
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VG++L+DMYA+ + + +F + KN +WN LI+G+A +G+ AL+ FS ML E
Sbjct: 226 FVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLME 285
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIE 247
F+P ++ V A G + +G+W + + G + G +VD+ ++G +E
Sbjct: 286 NFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYG-CMVDLLGRAGLLE 344
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHG---LGKATVR 282
+A ++ + ++ D + W ++L C HG LG+ ++
Sbjct: 345 EALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIK 383
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 1/234 (0%)
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
S N N++I + ++ +L F+ M + P ++ +V A A GK
Sbjct: 51 SINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKM 110
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+H VI+ G + LV +Y SI DA ++F+ + +R+ V+WN+++TG +
Sbjct: 111 IHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRK 170
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ F ML +G P++ T + VL+ACSH G ++G+ + + +
Sbjct: 171 FVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTA 230
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
+D+ + G + K E+ E W L+ M+ + A R+
Sbjct: 231 LIDMYAKCGAVYEVEKVFEEIR-EKNVYTWNVLISGYAMNGQGDAALQAFSRML 283
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+HL + + +H I + + ++ + +++ YAKCG + E K+F+E+ K++ TW
Sbjct: 200 CSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTW 259
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISGY+ N Q + A+ FS+ML KP++ T VL A + Q +
Sbjct: 260 NVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQ 319
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
++G + ++D+ R +++A L ++ + + W AL+ H GE
Sbjct: 320 QFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGE 379
Query: 178 KALRTFSEM 186
++ E+
Sbjct: 380 YIIKRLIEL 388
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 310/541 (57%), Gaps = 37/541 (6%)
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAF 119
ALI S++ +P A+ L++ +LR GL P TL S+LK+ S A VH
Sbjct: 42 ALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHTH 101
Query: 120 CLKYGYDWNVYVGSSLLDM--------------------------------YARFDQMDD 147
+K G D V V ++L+ + YAR ++ D
Sbjct: 102 AVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLAD 161
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + ++N VSW+A++ G+ + +G +ALR F+ M E P V A A
Sbjct: 162 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQ 221
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+LEQGKWVH ++ G ++ F G LVDMY+K G ++ A VF R+ ++V++W +M
Sbjct: 222 HGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTM 281
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHG 326
+ G A HG G V F +M +GI P+ + F+ VL AC+HAGL+D+G+ F ++++K+G
Sbjct: 282 IKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYG 341
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
++P+ HY VDLL R G L A + I++MP+EP A +WGAL+ CR HKNVE Y A
Sbjct: 342 IKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVA 401
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+ L+P SG ++LL+NIYA++GR A R +M+E GV K P CS VE +H F
Sbjct: 402 KHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQF 461
Query: 447 VANDDAHPQRAMIHKKWREISEKIK-QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
+ D +HP+ I KW EI +I+ + GY+PD VL +++E+E L HSEKLA+A
Sbjct: 462 IVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIA 521
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
FALIS I I KN+RVC DCH K SKV REI+VRD RFH F++G CSC DY
Sbjct: 522 FALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDY 581
Query: 566 W 566
W
Sbjct: 582 W 582
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 149/275 (54%), Gaps = 17/275 (6%)
Query: 14 VHAHILGS----------AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
VHA LGS A D + NT++ AYA+ G L +AR LFDEMP ++ V+W+A
Sbjct: 120 VHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSA 179
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLK 122
+++GY Q A+ +F++M ++P+ L VL A GA + G+ VH +
Sbjct: 180 MVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQ--GKWVHGYLKA 237
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
+G N++ G++L+DMY++ ++ A +F ++ KN ++W +I G A G +A+
Sbjct: 238 HGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVML 297
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMY 240
F++M G P ++ V A G +++G+ + +++ G + G +VD+
Sbjct: 298 FAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYG-CMVDLL 356
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
A++G + +A+++ ++ ++ D + W +++ GC H
Sbjct: 357 ARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFH 391
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L++ + VH ++ K ++ +++ Y+KCG + A +F+ M K+++ W
Sbjct: 219 CAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAW 278
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G + + + A++LF+QM G++P+ VL A DK +
Sbjct: 279 TTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVR 338
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
KYG + ++D+ AR + +A + + + + + W AL+AG
Sbjct: 339 KYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAG 387
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/579 (36%), Positives = 334/579 (57%), Gaps = 16/579 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + VH + + + ++ N++ Y K G L+ + F +P K+++TW
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITW 248
Query: 62 TALISGYSQNDQ-PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T +IS ++++ E + LF ML+ + PN+FTL+SV+ G + D G+QV FC
Sbjct: 249 TTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGT-SLDMNLGKQVQGFC 307
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-------- 172
K G N+ V +S + +Y R + ++A LF +E + ++WNA+I+G A+
Sbjct: 308 FKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDD 367
Query: 173 ---KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
+S G +AL+ F +++R +P F++SS+ + ++ +LEQG+ +HA IK+G
Sbjct: 368 LHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSD 427
Query: 230 AFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR 289
V + LV+MY K G IE A K F + R +V+W SM++G +QHG ++ FE M+
Sbjct: 428 VVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMIL 487
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLD 348
G PN++TF+ +L+ACS+AGL++E YF +M+ ++ +EP HY +D+ R G LD
Sbjct: 488 AGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLD 547
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYA 408
A FI+ EP A+W +L+ CR H N+EL YAA+R+ EL P ++LL N+Y
Sbjct: 548 DAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYI 607
Query: 409 SAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISE 468
S GR D AR RK+ K + SW+ ++ V+ F A+D +HPQ +++ + E
Sbjct: 608 STGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLE 667
Query: 469 KIKQIGYVPDSSHVL--SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVC 526
K K IGY P + L S D + L+ HSE+LA+A L+ PPG T+ I KNI +C
Sbjct: 668 KAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMC 727
Query: 527 GDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
DCHS+ KF S + REI+VRD+ R H F+DG CSCGD+
Sbjct: 728 RDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 195/388 (50%), Gaps = 14/388 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C L A+ +H H++ + DI + +++N Y +CG +AR LFDEMP K++VT
Sbjct: 87 RCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVT 146
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WTALI+GY+ N QP A+ +F +ML+LG P+ +TL +L A A D G+QVH +
Sbjct: 147 WTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNID-LGKQVHGYT 205
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR-KSEGEKA 179
+KYG +G+SL +Y + ++ F + KN ++W +I+ A ++ E
Sbjct: 206 IKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELG 265
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L F +ML+ P F+ +SV + ++ + GK V K G V N+ + +
Sbjct: 266 LNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYL 325
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-----------HGLGKATVRWFEKML 288
Y + G E+A ++F + V++WN+M++G AQ G ++ F ++
Sbjct: 326 YLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLV 385
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
R+ + P+ TF +L+ CS L++G+ A K G + V++ + G ++
Sbjct: 386 RSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIE 445
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMH 376
A K EMP T W +++ H
Sbjct: 446 YATKAFVEMPTR-TLVTWTSMISGYSQH 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 6/228 (2%)
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
+ +V N + R + ++A+ ML+EG Y + TGSL K
Sbjct: 43 QGSTQVLENGRLEAPPRPLDAQEAM----AMLKEGQSVQSAMYVPLLHRCIETGSLGGAK 98
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
+H H++K+G + FV +LV++Y + G+ +DA +F+ + +++VV+W +++TG +
Sbjct: 99 ALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNS 158
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ F +ML+ G P+ T +L+AC + +D G+ K+G +
Sbjct: 159 QPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGN 218
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKN-VELG 382
+ L ++G L+ ++ + +P + W ++ AC +N ELG
Sbjct: 219 SLCRLYTKSGNLESGIRAFKRIP-DKNVITWTTMISACAEDENYTELG 265
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/565 (38%), Positives = 327/565 (57%), Gaps = 19/565 (3%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A VH ++ + +D+ + + +++ YAK G L EA LF + ++V + +I+G+ +
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 71 NDQ------PENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKY 123
+ A+ L+S++ G++P +FT SSVL+A AG + FG+Q+H +KY
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLE--FGKQIHGQVIKY 348
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ + ++GS+L+D+Y M+D + F + + V+W A+++G + EKAL F
Sbjct: 349 TFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF 408
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
E L G +P F+ SSV A AS G+ + KSG +GN+ V MYA+S
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G ++ A + F + DVVSW+++++ AQHG + + +F++M+ + PN++TFL VL
Sbjct: 469 GDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 304 TACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
TACSH GL+DEG Y+ M K +G+ P H VDLLGRAG L A FI
Sbjct: 529 TACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHAD 588
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+W +LL +CR+H+++E G A RI EL+P S +++L N+Y AG L+ A++ R +
Sbjct: 589 PVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDL 648
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
MK+ GVKKEP SW+E K VH FVA D +HP+ + I+ K E+ +I+++
Sbjct: 649 MKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTD----- 703
Query: 483 LSYADQQEREAKL-QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
+ +RE L HSEKLA+A +I P + I + KN+RVC DCHS K SK
Sbjct: 704 ---TEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSEN 760
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD RFHHFRDG CSC DYW
Sbjct: 761 REIILRDPIRFHHFRDGSCSCADYW 785
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 197/376 (52%), Gaps = 8/376 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ R VHA + + + + N++++ Y+KCG + EAR++FD +D V+W
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFGRQVHAFC 120
+L+SGY + E + +F+ M R G+ N F L SV+K SG G VH
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCV 238
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR------KS 174
+K G D +V++ S+++DMYA+ + +A LF +++ N V +N +IAG R K
Sbjct: 239 IKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKE 298
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+AL +SE+ G +PT F++SSV A G LE GK +H VIK Q F+G+
Sbjct: 299 VASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGS 358
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+D+Y SG +ED + F K D+V+W +M++GC Q+ L + + F + L G+ P
Sbjct: 359 ALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKP 418
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ T V+ AC+ + G+ K G + + V + R+G +D A +
Sbjct: 419 DLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRF 478
Query: 355 REMPIEPTAAVWGALL 370
+EM + W A++
Sbjct: 479 QEMESHDVVS-WSAVI 493
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 187/354 (52%), Gaps = 12/354 (3%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
++NT+L AY + G AR+L DEMP ++ V++ LI YS+ ++ ++ R G
Sbjct: 45 LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104
Query: 89 LKPNQFT-LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
+ ++F+ +++ S AG + GR VHA + G V+V +SL+ MY++ +M +
Sbjct: 105 VDVDRFSYAAALAACSRAGHL--RAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA- 206
A +F E +++VSWN+L++G+ R E+ +R F+ M R G F+ SV +
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 207 -STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
G+++ + VH VIK+G F+ + ++DMYAK G++ +A +F + + +VV +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 266 SMLTG-C-AQHGLGKAT----VRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF 319
+M+ G C + +GK + + ++ G+ P + TF VL AC+ AG L+ G+
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342
Query: 320 ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ K+ + ++ +DL +G ++ + R P + W A++ C
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 168/340 (49%), Gaps = 22/340 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + +H ++ F+ D + + +++ Y GC+++ + F P D+VTW
Sbjct: 329 CNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTW 388
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++SG QN+ E A+ LF + L GLKP+ FT+SSV+ A + A + G Q+ F
Sbjct: 389 TAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAV-ARAGEQIQCFAT 447
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D +G+S + MYAR +D A F +ES + VSW+A+I+ HA+ AL
Sbjct: 448 KSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALH 507
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F EM+ P ++ V TA + G +++G + + K G T +VD+
Sbjct: 508 FFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLL 567
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
++G + DAE + N + D V W S+L C H + R + N++
Sbjct: 568 GRAGRLADAEAFISNGIFHADPVIWRSLLASCRIH----------RDLERGQLVANRIME 617
Query: 300 LCVLTACSHAGL----LDEGQGYFA-----LMKKHGVEPE 330
L ++ S+ L LD G+ A LMK+ GV+ E
Sbjct: 618 LEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKE 657
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++++ ++LL Y R A L + +N VS+N LI ++R+ +L T +
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
R G + FSY++ A + G L G+ VHA I G FV N+LV MY+K G +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A +VF+ +RD VSWNS+++G + G + VR F M R G+ N V+ CS
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221
Query: 308 HA--GLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
G +D + + K G++ + +D+ + G L A R + EP +
Sbjct: 222 GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVM 280
Query: 366 WGALL-GACR 374
+ ++ G CR
Sbjct: 281 FNTMIAGFCR 290
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 337/567 (59%), Gaps = 34/567 (5%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
+++ AK G L + + L + PV+D+++WT+LI+ YS+ ++ A+ F ML G+ P+
Sbjct: 179 LISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPD 238
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------F 142
+ T+ +VL A A D + GR +H + G + + +L+DMYA+ F
Sbjct: 239 EVTVIAVLSAC-AKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVF 297
Query: 143 DQM----------------------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
D + D A LF +E ++ +++N+++ G+ + +AL
Sbjct: 298 DALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREAL 357
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M R +F+ ++ TA AS G+L+QG+ +HA + + + ++G L+DMY
Sbjct: 358 LLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMY 417
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +++A VF R+ KRDV +W +M+ G A +G+GKA + F +M +G PN V+++
Sbjct: 418 MKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYI 477
Query: 301 CVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VLTACSH+ LL+EG+ YF M+ + + P+ HY +DLLGR+GLLD A+ ++ MPI
Sbjct: 478 AVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPI 537
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+P A +W ++L ACR+HK+++L AAE + +L+P + G ++ L NIY + + +A++
Sbjct: 538 QPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKI 597
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R +M+E VKK S + VH FV +D +HP+ I EIS ++K +GY P +
Sbjct: 598 RMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLT 657
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
S + D++E+E L HSEKLA+AF LI+ P +HI+KN+RVC DCHSA K S++
Sbjct: 658 SQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRL 717
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
REIIVRD +RFHHFR+G CSC D+W
Sbjct: 718 WNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 155/309 (50%), Gaps = 39/309 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCG-------------------- 41
C LK L+ R +H + + +++ YAKCG
Sbjct: 249 CAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQS 308
Query: 42 --------C----LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
C +D AR LFDEM V+D++T+ ++++GY + Q A++LF M R L
Sbjct: 309 WNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL 368
Query: 90 KPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+ + FT+ ++L A + GA GR +HA + + ++Y+G++LLDMY + ++D+A
Sbjct: 369 RVDNFTVVNLLTACASLGALQQ--GRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEA 426
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F + ++ +W A+IAG A G+ AL F +M +GF+P SY +V TA + +
Sbjct: 427 TIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHS 486
Query: 209 GSLEQGK--WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWN 265
L +G+ + ++ + + G ++D+ +SG +++A + + ++ + V W
Sbjct: 487 CLLNEGRLYFDEMRILYNIHPQIEHYG-CMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545
Query: 266 SMLTGCAQH 274
S+L+ C H
Sbjct: 546 SILSACRVH 554
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 157/381 (41%), Gaps = 66/381 (17%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A LFD MP + TAL + P +LF +M R G++P+ FT + K
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKC 112
Query: 103 SGAGATDDK--FGRQVHAFCLKYGYDWNV-YVGSSLLDMYAR----------FDQMD--- 146
S + + +HA CL+ +V +SL+ MY R FD++
Sbjct: 113 SSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKD 172
Query: 147 ------------------DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
D L + ++ +SW +LIA ++R + +A+ F ML
Sbjct: 173 AVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLS 232
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
G P + +V +A A LE G+ +H V + G + L+DMYAK G
Sbjct: 233 HGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGH 292
Query: 249 AEKVFNRLLK--------------------------------RDVVSWNSMLTGCAQHGL 276
A++VF+ L + RD++++NSM+TG G
Sbjct: 293 AQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQ 352
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ + F M R+ + + T + +LTAC+ G L +G+ A +++ VE +
Sbjct: 353 LREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTA 412
Query: 337 FVDLLGRAGLLDRALKFIREM 357
+D+ + G +D A + M
Sbjct: 413 LLDMYMKCGRVDEATIVFQRM 433
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 47/277 (16%)
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
FD+M + FLF AL A S+ + F M R G P F++ +
Sbjct: 60 FDRMPPSTFLFD----------TALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFL 109
Query: 202 FTALASTG---SLEQGKWVHAHVIKSGGQLVA-FVGNTLVDMYAKSGSIEDAEKVFNRLL 257
F +S+ SL +HA +++ A FV N+L+ MY + G DA + F+ +
Sbjct: 110 FKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIH 169
Query: 258 KRDVVSWNSMLTGCAQHG--------LGKATVR----W-------------------FEK 286
+D V+W +++G A+ G L +A VR W F+
Sbjct: 170 VKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKT 229
Query: 287 MLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
ML +GIAP++VT + VL+AC+ L+ G+ L+++ G+ E V +D+ + G
Sbjct: 230 MLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGD 289
Query: 347 LDRALKFIREMPIEPTAAVWGALL-GACRMHKNVELG 382
A + + P W A++ G C+ H +V++
Sbjct: 290 FGHAQQVFDALGRGPRPQSWNAIIDGYCK-HGHVDVA 325
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/588 (35%), Positives = 352/588 (59%), Gaps = 39/588 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK------------- 48
C K KE + +H H+L F D+ + ++++ YA+ G L++A+K
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 49 ------------------LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
+FDE+P+KD+V+W A+ISGY++ + A+ LF +M++ +K
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P++ T+++V+ A + + GRQVH++ +G+ N+ + ++L+D+Y++ +++ A
Sbjct: 205 PDESTMATVVSACAQSGSIE-LGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
L L +K+ +SWN LI G+ + ++AL F EMLR G P + S+ A A G+
Sbjct: 264 LLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323
Query: 211 LEQGKWVHAHVIKSGGQLV----AFVGNTLVDMYAKSGSIEDAEKVFNR-LLKRDVVSWN 265
++ G+W+H ++ K +V + + +L+DMYAK G I+ A +V + R + +WN
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK- 324
+M+ G A HG A F +M +NGI P+ +TF+ +L+ACSH+G+LD G+ F M++
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQD 443
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
+ + P+ HY +DLLG +GL A + I MP+EP +W +LL AC++H N+ELG
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 503
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE-PACSWVETKNAV 443
A+++ +++P + G ++LL+NIYA+AG+ N+ + R ++ + G+KK+ P CS +E + V
Sbjct: 504 FAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVV 563
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F+ D HPQ I+ E+ +++ G+VPD+S VL +++ +E L+ HSEKLA
Sbjct: 564 HEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 623
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
+AF LIST PG+ + I KN+RVC +CH A K SK+ +REII RD R
Sbjct: 624 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 198/391 (50%), Gaps = 38/391 (9%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L A +F+ +P + + W + G++ + P +A+ L+ M+ LGL PN FT +LK+
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF---------- 152
T K G+Q+H LK G+D ++YV +SL+ MYA+ +++DA +F
Sbjct: 85 CAKSKTF-KEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVS 143
Query: 153 -TALES--------------------KNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
TAL + K+ VSWNA+I+G+A +KAL F EM++
Sbjct: 144 YTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNV 203
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+P + ++V +A A +GS+E G+ VH+ + G + N L+D+Y+K G +E A +
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+ L +DV+SWN+++ G L K + F++MLR+G PN VT L +L AC+H G
Sbjct: 264 LLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323
Query: 312 LDEGQGYFALMKK--HGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
+D G+ + K GV A + + +D+ + G +D A + + + W
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383
Query: 368 ALLGACRMH--KNVELGAYAAERIFELDPHD 396
A++ MH N ++ R ++P D
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 135/277 (48%), Gaps = 35/277 (12%)
Query: 130 YVGSSLLD---MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
Y S LL+ + FD + A +F + N++ WN + GHA S+ AL+ + M
Sbjct: 7 YAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM 66
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G P F++ + + A + + ++G+ +H HV+K G L +V +L+ MYA++G +
Sbjct: 67 ISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRL 126
Query: 247 EDAEKVFNR-------------------------------LLKRDVVSWNSMLTGCAQHG 275
EDA+KVF+R + +DVVSWN+M++G A+ G
Sbjct: 127 EDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETG 186
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
K + F++M++ + P++ T V++AC+ +G ++ G+ + + HG
Sbjct: 187 NYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVN 246
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+DL + G ++ A + + + + + W L+G
Sbjct: 247 ALIDLYSKCGEVETACELLEGLSNKDVIS-WNTLIGG 282
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/584 (38%), Positives = 333/584 (57%), Gaps = 40/584 (6%)
Query: 19 LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY-SQNDQPENA 77
LG + N + + +K G ++ A KLF +P D + L + S + P +
Sbjct: 28 LGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLS 87
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
++ +S ML+ + PN FT S+++A ++ +Q+HA LK+G+ + Y ++L+
Sbjct: 88 LLFYSHMLQHCVTPNAFTFPSLIRACKL----EEEAKQLHAHVLKFGFGGDTYALNNLIH 143
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM----------- 186
+Y F +DDA +F + N VSW +L++G+++ ++A R F M
Sbjct: 144 VYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNA 203
Query: 187 ----------LREGF------------EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
RE F E F +++ +A G+LEQG W+H +V K+
Sbjct: 204 MIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKT 263
Query: 225 GGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWF 284
G L + + T++DMY K G ++ A VF L + V SWN M+ G A HG G+ +R F
Sbjct: 264 GIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLF 323
Query: 285 EKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLG 342
++M +AP+ +TF+ VLTAC+H+GL++EG YF M HG++P + HY VDLL
Sbjct: 324 KEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLA 383
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
RAG L+ A K I EMP+ P AAV GALLGACR+H N+ELG R+ ELDP +SG +++
Sbjct: 384 RAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVI 443
Query: 403 LANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKK 462
L N+YAS G+ A RK+M + GVKKEP S +E + V+ FVA HP I+ K
Sbjct: 444 LGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAK 503
Query: 463 WREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKN 522
E+ E I+ +G+VPD+ VL ++ERE L HSEKLA+A+ L+ T G T+ + KN
Sbjct: 504 IYEMLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKN 563
Query: 523 IRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+RVC DCH A K SKV + +II+RD +RFHHF +G CSC DYW
Sbjct: 564 LRVCKDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 152/304 (50%), Gaps = 39/304 (12%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
+EA+ +HAH+L F D N +++ Y G LD+AR++F M ++V+WT+L+SGY
Sbjct: 117 EEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGY 176
Query: 69 SQ------------------NDQPENAII--------------LFSQM-LRLGLKPNQFT 95
SQ N NA+I LF +M + ++ ++F
Sbjct: 177 SQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFV 236
Query: 96 LSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
+++L A +G GA + G +H + K G + + ++++DMY + +D A+ +F
Sbjct: 237 AATMLSACTGVGALEQ--GMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCG 294
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALASTGSLEQ 213
L+ K SWN +I G A +GE A+R F EM E P ++ +V TA A +G +E+
Sbjct: 295 LKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEE 354
Query: 214 GKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC 271
G + +++ G +VD+ A++G +E+A+KV + + + D ++L C
Sbjct: 355 GWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGAC 414
Query: 272 AQHG 275
HG
Sbjct: 415 RIHG 418
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + L++ +H ++ + D + TI++ Y KCGCLD+A +F + VK + +W
Sbjct: 244 CTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSW 303
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+I G++ + + E+AI LF +M + P+ T +VL A ++
Sbjct: 304 NCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMV 363
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA 148
+G D ++D+ AR ++++A
Sbjct: 364 DVHGIDPTKEHYGCMVDLLARAGRLEEA 391
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/548 (38%), Positives = 339/548 (61%), Gaps = 8/548 (1%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDE----MPVKDMVTWTALISGYSQNDQPENAIIL 80
N+ ++ ++ ++ C +DEAR++F++ + + + V W A+ GYS+N P+ A++L
Sbjct: 107 NNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESV-WVAMGIGYSRNGYPKEALLL 165
Query: 81 FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
+ +M+ + F S LKA + D + GR VHA LK D + V ++LL +Y+
Sbjct: 166 YYEMVCQFGQLGNFAFSMALKAC-SDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYS 224
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
D+A +F + +N VSWN+LIAG +K +A+ F M +G + + ++
Sbjct: 225 EDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTT 284
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ A +L GK +HA ++KS + A V N+LVDMYAK G+++ +VFN + +D
Sbjct: 285 ILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKD 344
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+ SWN+++TG A +G + F++M+ +G +P+ +TF+ +L+ CSHAGL D+G F
Sbjct: 345 LTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFE 404
Query: 321 LMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
+MK +G+ P HY VD+LGRAG + AL+ ++ MP +PT ++WG+LL +CR+H NV
Sbjct: 405 MMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNV 464
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
L A+R+FEL+P+++G +++L+NIYA+AG R+ M++ G+ KE CSW++
Sbjct: 465 PLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQI 524
Query: 440 KNAVHMFVANDDAHPQRAMIHKK-WREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH 498
K+ +H FVA + ++ +KK W+ + E ++++GYVPD+ VL ++ R + H
Sbjct: 525 KSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGH 584
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
SE+LA FALI+T G I I KN+RVC DCHS K SKV R I++RDTNRFHHF+DG
Sbjct: 585 SERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDG 644
Query: 559 FCSCGDYW 566
CSC DYW
Sbjct: 645 VCSCKDYW 652
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 14/336 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R VHA +L + D + N +L Y++ GC DEA ++FD MP +++V+W
Sbjct: 188 CSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSW 247
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+G + D AI F M G+ + TL+++L A T G+++HA +
Sbjct: 248 NSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVC-ARVTALGSGKEIHAVIV 306
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + V +SL+DMYA+ MD +F ++ K+ SWN LI G+A +A+
Sbjct: 307 KSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAME 366
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
+F EM+ GF P ++ ++ + + G + G + + G LVD+
Sbjct: 367 SFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVL 426
Query: 241 AKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG---LGKATV-RWFEKMLRNGIAPN 295
++G I++A E V N K W S+L C HG L +A R FE + PN
Sbjct: 427 GRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE------LEPN 480
Query: 296 QV-TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
++ + ++AG+ + + M+K G+ E
Sbjct: 481 NAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKE 516
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/605 (37%), Positives = 340/605 (56%), Gaps = 49/605 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLF-------DEMP 54
C++ + LK I+HAH+L + D+ + ++ A+ C+D L ++
Sbjct: 27 CSNARDLK---IIHAHMLRTHLFFDVFAASRLI-AF----CIDSTTNLLHYAIRVASQIQ 78
Query: 55 VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGR 114
++ + ALI G S ++ PEN+ + + LR GL P+ T ++KA A + G
Sbjct: 79 NPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKAC-AQLENAPMGM 137
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYA----------------RFDQMD------------ 146
Q H +K+G++ + YV +SL+ MYA RFD +
Sbjct: 138 QTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCG 197
Query: 147 ---DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
A LF + +N V+W+ +I+G+AR + EKA+ TF + EG V +
Sbjct: 198 DAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVIS 257
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ A G+L G+ H +V+++ L +G +VDMYA+ G++E A VF +L ++DV+
Sbjct: 258 SCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLC 317
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +++ G A HG + + +F +M + G P +TF VLTACSHAG+++ G F MK
Sbjct: 318 WTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMK 377
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+ HGVEP HY VDLLGRAG L +A KF+ +MP++P A +W ALLGACR+HKNVE+G
Sbjct: 378 RDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVG 437
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
+ + E+ P SG ++LL+NIYA A + D R+MMK+ GV+K P S +E
Sbjct: 438 ERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGK 497
Query: 443 VHMFVANDDAHPQRAMIHKKWREIS-EKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
VH F D HP+ I + W +I KIK GYV +++ + D++E+E L HSEK
Sbjct: 498 VHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEK 557
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA+A+ ++ + I I KN+RVC DCH+A K SKV E E+IVRD NRFHHF++G CS
Sbjct: 558 LAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCS 617
Query: 562 CGDYW 566
C DYW
Sbjct: 618 CMDYW 622
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 352/614 (57%), Gaps = 48/614 (7%)
Query: 1 KCTHLK-KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
KC L L+ + VHA +L + D+ + N+IL+ Y KC + A ++F+ M D+V
Sbjct: 398 KCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVV 457
Query: 60 TWTALISGYSQNDQPENAIILFSQM---------------LRLGLKPNQFTLSSVLKASG 104
+W +IS Y + E ++ +F ++ ++ G + + G
Sbjct: 458 SWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECG 517
Query: 105 AGATDDKF---------------GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+ F GRQ+H LK+G+ + ++ SSL++MY + +MD+A
Sbjct: 518 TEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNAS 577
Query: 150 FLFTA-----LESKNE-----------VSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+ L++ N VSW +++G+ + E L+TF M+RE
Sbjct: 578 IVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVV 637
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ +++ +A A+ G LE G+ VHA+ K G ++ A+VG++L+DMY+KSGS++DA +F
Sbjct: 638 DIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIF 697
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + ++V W SM++GCA HG GK + FE+ML GI PN+VTFL VL AC HAGLL+
Sbjct: 698 RQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLE 757
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG YF +MK + + P H + VDL GRAG L FI E I +VW + L +
Sbjct: 758 EGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSS 817
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+HKNVE+G + +E + ++ P D G ++LL+N+ AS R ++AAR R +M + G+KK+P
Sbjct: 818 CRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQP 877
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SW++ K+ +H F+ D +HPQ I+ + ++K+IGY D V+ ++++ E
Sbjct: 878 GQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGE 937
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
+ HSEKLA+ F +I+T + I I KN+R+C DCH+ K+AS++++REII+RD +RF
Sbjct: 938 VLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRF 997
Query: 553 HHFRDGFCSCGDYW 566
HHF+ G CSCGDYW
Sbjct: 998 HHFKHGGCSCGDYW 1011
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 208/445 (46%), Gaps = 52/445 (11%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +L Y K +D ARKLFDE+P ++ TWT LISG+S+ E LF +M G
Sbjct: 328 NYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGAC 387
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PNQ+TLSS+ K + + G+ VHA+ L+ G D +V +G+S+LD+Y + + A
Sbjct: 388 PNQYTLSSLFKCCSLD-INLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAER 446
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSE------------------------- 185
+F + + VSWN +I+ + R + EK+L F
Sbjct: 447 VFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQA 506
Query: 186 ------MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
M+ G E + ++S +S +E G+ +H V+K G F+ ++LV+M
Sbjct: 507 LEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEM 566
Query: 240 YAKSGSIEDAEKVFNRL----------------LKRDVVSWNSMLTGCAQHGLGKATVRW 283
Y K G +++A V + LK +VSW M++G +G + ++
Sbjct: 567 YCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKT 626
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F M+R + + T +++AC++AG+L+ G+ A K G + + +D+ +
Sbjct: 627 FRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSK 686
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHI 401
+G LD A R+ EP W +++ C +H + E + + P++ +
Sbjct: 687 SGSLDDAWTIFRQTN-EPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEV-TFL 744
Query: 402 LLANIYASAGRLNDAARARKMMKES 426
+ N AG L + R +MMK++
Sbjct: 745 GVLNACCHAGLLEEGCRYFRMMKDA 769
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%)
Query: 116 VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE 175
+HA +K G + + LL +Y + MD A LF + +N +W LI+G +R
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
E + F EM +G P ++ SS+F + +L+ GK VHA ++++G +GN+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
++D+Y K E AE+VF + + DVVSWN M++ + G + ++ F ++
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRL 482
>gi|125586937|gb|EAZ27601.1| hypothetical protein OsJ_11548 [Oryza sativa Japonica Group]
Length = 651
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 322/540 (59%), Gaps = 8/540 (1%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ +L+ YA C D ARK+FD MP ++ VTW ALI GY+Q + E AI+LF M R G
Sbjct: 111 LATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREG 170
Query: 89 --LKPNQFT----LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
+ P+++T LS + + G+G T + G +HA +K G + + +VG+SL+ +YA
Sbjct: 171 SHVAPDRYTFPALLSGIGREGGSGRTLE-LGGALHAHVIKAGLERDPFVGASLVSLYAAR 229
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
++DA F + S + + W+++I+ + E E AL F ML + +PT F YS+VF
Sbjct: 230 RTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVF 289
Query: 203 TALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+ G LE GK VHAH +KS + A + N L+ MY+ G I DA+KVF+ +V+
Sbjct: 290 SVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVI 349
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFAL 321
S+NSM++ QHG K + F +M G+ P++VT L ++++ +HAGL+ EG Q + ++
Sbjct: 350 SYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSM 409
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+ G++P HY VD+L R+G + +A+K I EMP E A +W +LGAC H+++E
Sbjct: 410 VDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIET 469
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
G AE +FE++P+++ +ILL NIYA GR +A + R +M E GV K+ A SW+E
Sbjct: 470 GKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQ 529
Query: 442 AVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEK 501
+ F +D +HP I++ + IK GYVPD S + +E L H EK
Sbjct: 530 RTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEK 589
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCS 561
LA AF ++ P G T+ I KN+RVCGDCH A+K+ S V REII+RD RFHHF GFCS
Sbjct: 590 LAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCS 649
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 15/277 (5%)
Query: 91 PNQFTLSSVLKASGAGATDDK------FGRQVHAFCLKYGY---DWNVYVGSSLLDMYAR 141
P S++LKA+ + A+ + G Q+HA + G+ D + + +++L YA
Sbjct: 62 PTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYAS 121
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTHFSYS 199
+ D A +F + +N V+WNALI G+A+ E+A+ F +M REG P +++
Sbjct: 122 CREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFP 181
Query: 200 SVFTALASTG----SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
++ + + G +LE G +HAHVIK+G + FVG +LV +YA ++EDA+ F++
Sbjct: 182 ALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQ 241
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D + W+SM++ + + F ML I P Q + V + C G+L+ G
Sbjct: 242 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 301
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ A K E + A + + + G ++ A K
Sbjct: 302 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQK 338
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 15/360 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L+ +HAH++ + + D + ++++ YA L++A+ FD++ D + W+++I
Sbjct: 195 RTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMI 254
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
S Y ++ E A+++F ML +KP QF S+V G + G+QVHA LK
Sbjct: 255 SAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILE-MGKQVHAHSLKSNT 313
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + + ++LL MY+ ++DA +F++ + N +S+N++I+ + ++AL F +
Sbjct: 314 EKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQ 373
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGNTLVDMY 240
M G P + ++ ++ G + +G V IK Q A V VDM
Sbjct: 374 MKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACV----VDML 429
Query: 241 AKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT- 298
A+SG I A K N + + + W +L C++H + R E + + P + T
Sbjct: 430 ARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFE--MEPYEATN 487
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA-HYVTFVDLLGRAGLLDRALKFIREM 357
++ + + G E + +LM + GV ++A ++ R G+ DR+ RE+
Sbjct: 488 YILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREI 547
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VHAH L S + D AM N +L Y+ CGC+++A+K+F +++++
Sbjct: 292 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 351
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD---KFGRQVH 117
++IS Q+ P+ A+ F QM GL P++ TL +++ + + AG + F V
Sbjct: 352 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 411
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K Y V +DM AR ++ A + + E ++ G K
Sbjct: 412 IEGIKPMYQHYACV----VDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDI 467
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
+ + +EML E EP Y + L G+W A ++S
Sbjct: 468 ETGKRIAEMLFE-MEP----YEATNYILLGNIYARLGRWTEAEKVRS 509
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/602 (36%), Positives = 341/602 (56%), Gaps = 40/602 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + A +H+ I+ + F + NT+L+ Y KCG + +A +LFDEMP +D V+W
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKA-SGAGATDDKFGRQVHA- 118
++++ +++ P + + + M GL+P+ F + +++A S G + G+QVHA
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL--RLGKQVHAR 130
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE--- 175
F L + D V V SSL+DMY + Q DDA +F ++ KN VSW ++I+G+AR
Sbjct: 131 FMLSFFCDDEV-VKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCE 189
Query: 176 ----------------------------GEKALRTFSEMLREGFEPTH-FSYSSVFTALA 206
G + F+EM REG + SSV A
Sbjct: 190 AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCA 249
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ LE GK +H VI G + F+ N LVDMYAK I A+ +F R+ ++DV+SW S
Sbjct: 250 NLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTS 309
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKH 325
++ G AQHG + + +++M+ + I PN+VTF+ +L ACSHAGL+ G+ F ++ +
Sbjct: 310 IIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDY 369
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+ P HY +DLL R+G LD A + ++P +P W +LL AC H N+E+G
Sbjct: 370 SINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A+R+ +L P D +ILL+N+YA A ++ RK+M V+KEP S ++ +
Sbjct: 430 ADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQV 489
Query: 446 FVANDDA-HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F A + HP + I +++ ++++ GYVP++S VL +QQE+E +L HSE+LA+
Sbjct: 490 FHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAV 549
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
A+ L+ PG+ I I KN+R+CGDCH+ KF S +V+REI+VRD R+HHF++G CSC D
Sbjct: 550 AYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCND 609
Query: 565 YW 566
+W
Sbjct: 610 FW 611
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/570 (37%), Positives = 346/570 (60%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + +H + D ++ N ++ Y +CG + E ++F+ M D+V+W
Sbjct: 494 CAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSW 553
Query: 62 TALISGYSQNDQP-ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
+++ + + P ++ +FS M++ GL PN+ T + L A + + G+Q+H+
Sbjct: 554 NSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLE-LGKQIHSVM 612
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEKA 179
LK+G + V ++L+ YA+ +D LF+ + + + +SWN++I+G+ ++A
Sbjct: 613 LKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEA 672
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ M+ H ++S V A AS +LE+G +HA ++S + V + LVDM
Sbjct: 673 MDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDM 732
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y+K G I+ A KVF+ + +++ SWNSM++G A+HGLG+ + FE+M +G +P+ VTF
Sbjct: 733 YSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTF 792
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ VL+ACSHAGL++ G YF LM+ +G+ P HY +DLLGRAG LD+ ++++ MP+
Sbjct: 793 VSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPM 852
Query: 360 EPTAAVWGALLGACRMHKN---VELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDA 416
+P +W +L AC+ K+ ++LG A+ + EL+P + ++L + +A+ GR D
Sbjct: 853 KPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDT 912
Query: 417 ARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
A+AR MK + VKKE SWV + VH F+A D +HP I++K + +KI+ GYV
Sbjct: 913 AKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYV 972
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
P + +VL +++ +E L+ HSEKLA+AF L + G I I KN+RVCGDCH+AF++
Sbjct: 973 PLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYI 1032
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++V R+II+RD+ RFHHF+DG CSCGDYW
Sbjct: 1033 SQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 182/358 (50%), Gaps = 6/358 (1%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+L S +D+ + + +++A+A+ G LDEA+ ++ + ++ VT LI+G + E A
Sbjct: 304 VLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAA 363
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDD---KFGRQVHAFCLKYGYDW-NVYVGS 133
+F R N T +L A +T + + GR+VHA L+ G+ + + V +
Sbjct: 364 AEIFMGA-RDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSN 422
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L++MYA+ +D A +F +E+++ +SWN +I + E A+ + M + P
Sbjct: 423 GLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGP 482
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++F+ S ++ A G L G+ +H +K G L V N LV MY + G + + ++F
Sbjct: 483 SNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIF 542
Query: 254 NRLLKRDVVSWNSML-TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
N + DVVSWNS++ + +V+ F M+++G+ PN+VTF+ L A + +L
Sbjct: 543 NSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVL 602
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ G+ ++M KHGV + A + ++G +D + M A W +++
Sbjct: 603 ELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMI 660
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 42/372 (11%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H ++ +D+ + N ++N+YAK LD AR++FD MP ++ V+WT LISG+ +
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 74 PENAIILFSQMLR--LGLKPNQFTLSSVLKASGAGATDD-KFGRQVHAFCLKYGYDWNVY 130
PE+A LF MLR G +P FT SVL+A D F QVH K + N
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206
Query: 131 VGSSLLDMYARFDQMDD--AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V ++L+ MY A +F ++ ++WNAL++ +A++ + F M
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266
Query: 189 E--GFE--PTHFSYSSVFTAL----ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ G E PT ++ S+ TA S G L+Q + V+KSG +VG+ LV +
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCSLGLLDQ---LFVRVLKSGCSSDLYVGSALVSAF 323
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
A+ G +++A+ ++ L +R+ V+ N ++ G + G+A F R+ A N T++
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGA-RDSAAVNVDTYV 382
Query: 301 CVLTACS---------------HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+L+A + HA +L G Y + +G+ V++ + G
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGL----------VNMYAKCG 432
Query: 346 LLDRALKFIREM 357
+D+A + + M
Sbjct: 433 AIDKACRVFQLM 444
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 19/256 (7%)
Query: 110 DKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAG 169
D +H +K G ++++ + L++ YA+ ++D A +F + +N VSW LI+G
Sbjct: 81 DASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISG 140
Query: 170 HARKSEGEKALRTFSEMLRE--GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
H E A F MLRE G PT F++ SV A +G G V H + S +
Sbjct: 141 HVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTE 200
Query: 228 LVA--FVGNTLVDMYAKS--GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
+ V N L+ MY G A++VF+ RD+++WN++++ A+ G T
Sbjct: 201 FTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTL 260
Query: 284 FEKMLRNG----IAPNQVTFLCVLTA-----CSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
F M + + P + TF ++TA CS GLLD+ F + K G +
Sbjct: 261 FRAMQYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQ---LFVRVLKSGCSSDLYVG 316
Query: 335 VTFVDLLGRAGLLDRA 350
V R G+LD A
Sbjct: 317 SALVSAFARHGMLDEA 332
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 332/560 (59%), Gaps = 3/560 (0%)
Query: 9 KEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
K H+++L ND+ + ++++ Y+ G A +FD M + +++W A+ISGY
Sbjct: 263 KVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGY 322
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWN 128
QN + LF ++++ G + TL S+++ + +D + GR +H+ ++ + +
Sbjct: 323 VQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGC-SQTSDLENGRILHSCIIRKELESH 381
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
+ + ++++DMY++ + A +F + KN ++W A++ G ++ E AL+ F +M
Sbjct: 382 LVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQE 441
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED 248
E + S+ A GSL +G+ VHAH I+ G A + + L+DMYAK G I
Sbjct: 442 EKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHS 501
Query: 249 AEKVFNRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
AEK+FN +DV+ NSM+ G HG G+ + + +M+ + PNQ TF+ +LTACS
Sbjct: 502 AEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACS 561
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H+GL++EG+ F M++ H V P+ HY VDL RAG L+ A + +++MP +P+ V
Sbjct: 562 HSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVL 621
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
ALL CR HKN +G A+R+ LD +SG +++L+NIYA A + R +M+
Sbjct: 622 EALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQ 681
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
G+KK P S +E N V+ F A+DD+HP A I++ + +++ GY+PD+S VL
Sbjct: 682 GMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDV 741
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
++ + L HSE+LA+AF L+STP GS I I KN+RVC DCH+ K+ SK+V+REIIV
Sbjct: 742 NEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIV 801
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFHHF +G CSC D+W
Sbjct: 802 RDANRFHHFVNGKCSCNDFW 821
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 177/363 (48%), Gaps = 2/363 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + +HA I+ + + + ++ Y+ G L AR +FD+ + + A+I+G
Sbjct: 60 LIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAG 119
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ +N Q LF M ++ N +T LKA DD+ G ++ ++ G+
Sbjct: 120 FLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKAC-TDLLDDEVGMEIIRAAVRRGFHL 178
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++YVGSS+++ + + DA +F + K+ V WN++I G+ +K ++++ F EM+
Sbjct: 179 HLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMI 238
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P+ + +++ A +G + G H++V+ G FV +LVDMY+ G
Sbjct: 239 GGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTG 298
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
A VF+ + R ++SWN+M++G Q+G+ + F +++++G + T + ++ CS
Sbjct: 299 SAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCS 358
Query: 308 HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
L+ G+ + + + +E VD+ + G + +A M + W
Sbjct: 359 QTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWT 417
Query: 368 ALL 370
A+L
Sbjct: 418 AML 420
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 152/280 (54%), Gaps = 12/280 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ RI+H+ I+ ++ + + I++ Y+KCG + +A +F M K+++TW
Sbjct: 357 CSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITW 416
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++ G SQN E+A+ LF QM + N TL S++ + K GR VHA +
Sbjct: 417 TAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTK-GRTVHAHFI 475
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLF-TALESKNEVSWNALIAGHARKSEGEKAL 180
++GY ++ + S+L+DMYA+ ++ A LF K+ + N++I G+ G AL
Sbjct: 476 RHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYAL 535
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWV-----HAHVIKSGGQLVAFVGNT 235
+S M+ E +P ++ S+ TA + +G +E+GK + H ++ + A
Sbjct: 536 GVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYA----C 591
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
LVD+++++G +E+A+++ ++ + ++L+GC H
Sbjct: 592 LVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTH 631
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/561 (39%), Positives = 327/561 (58%), Gaps = 14/561 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
KLKEA+ + I + D NT+L+ Y + ++ A+ F++MP+KD +W +I+
Sbjct: 22 KLKEAQELFVKIP----EPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMIT 77
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
G++QN Q + A LF M N T ++++ D + K
Sbjct: 78 GFAQNQQMDKARDLFLIMP----TKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVA 133
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
W ++++ Y + ++ A LF + KN V+WNA+IAG+ E ++ F M
Sbjct: 134 W-----TAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTM 188
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ G +P + SS + +L+ G+ VH V KS G +L+ MY K G +
Sbjct: 189 VGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVL 248
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
ED K+F ++ +RDVV+WN+M++G AQHG GK + F++M+ G+ P+ +TF+ VL AC
Sbjct: 249 EDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMAC 308
Query: 307 SHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
+HAG D G YF ++ K +G+ + HY VDLLGRAG L A+ I +MP +P AAV
Sbjct: 309 NHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAV 368
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
+G LLGACR+HKN E+ +A++++ LDP + ++ LAN+YA+ R + AR RK MK
Sbjct: 369 FGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKS 428
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
V K P SW+E K+ H F + D HP+ A IH K +E+ +K+K GYVPD L
Sbjct: 429 CKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHD 488
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++++E L HSEKLA+A+ LI PPG+ I + KN+RVCGDCH A K+ S++ REII
Sbjct: 489 VGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREII 548
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
VRDT RFHHF+DG CSC DYW
Sbjct: 549 VRDTTRFHHFKDGHCSCADYW 569
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R VH + S +D ++++ Y KCG L++ KLF ++P +D+VTW
Sbjct: 207 CSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTW 266
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+ISGY+Q+ + + A+ LF +M+ G+KP+ T +VL A D + H+
Sbjct: 267 NAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAK 326
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
YG + ++D+ R ++ +A L + K + + G R
Sbjct: 327 DYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACR 377
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 38/284 (13%)
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK WN S L M + ++ +A LF + + VS+N +++ + R S E+A
Sbjct: 3 LKTTVTWN----SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQ 58
Query: 181 RTFSEM----------LREGFE---------------PTH--FSYSSVFTALASTGSLEQ 213
F +M + GF PT +++++ + G L+
Sbjct: 59 AFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDS 118
Query: 214 G-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
K KS +VA+ ++ Y K G I AE++F ++ ++++V+WN+M+ G
Sbjct: 119 ALKLFEKAPFKS---VVAWTA--MITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYI 173
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
++ + V+ F M+ GI PN T L CS L G+ L+ K + +
Sbjct: 174 ENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTT 233
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + + + G+L+ K ++P W A++ H
Sbjct: 234 AGTSLISMYCKCGVLEDGWKLFVQVP-RRDVVTWNAMISGYAQH 276
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+ L M K G +++A+++F ++ + D VS+N+ML+ ++ + +FE M
Sbjct: 11 SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDM----PI 66
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
+ ++ ++T + +D+ + F +M V A +V+ G LD ALK
Sbjct: 67 KDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVE----CGDLDSALKL 122
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
+ P + A W A++ + L AER+FE P
Sbjct: 123 FEKAPFKSVVA-WTAMITGYMKLGRIGL----AERLFEKMP 158
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/571 (37%), Positives = 346/571 (60%), Gaps = 8/571 (1%)
Query: 2 CTHLKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+ L +L + R +HA ++ G D+ + N ++ AY +CGCL A ++FD + K +
Sbjct: 281 CSGLPELAKLRELHAFVVRRGLHLTGDM-VPNALIAAYGRCGCLLHACRVFDGICSKMVS 339
Query: 60 TWTALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+W ALI ++QN + AI LF +M G KP+ F++ S+L A G G+ H
Sbjct: 340 SWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACG-NLKHLLHGKAAHG 398
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
F L+ G + + ++ SLL +Y + + A LF A+E K+EVSWN +IAG+++ +
Sbjct: 399 FILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGE 458
Query: 179 ALRTFSEML--REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
+L+ F EM + G P+ + +S A + ++ GK +H +K+ +F+ +++
Sbjct: 459 SLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSI 518
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
+DMY+K GS++DA F+RL +D VSW M+TG A +G GK V ++KM R G+ P+
Sbjct: 519 IDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDG 578
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
T+L +L AC HAG+L++G +F M+ +E + HY + +L RAG A+ +
Sbjct: 579 FTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALME 638
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MP EP A + ++L AC MH VELG A+++ EL+PH + ++L +N+YA + + ++
Sbjct: 639 VMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDE 698
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
+ RKM++++GV KEP CSW++ V+ FVA +++ P+ + K W + EKI+ GY
Sbjct: 699 MRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGY 758
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
PD++ +L +++E+ L+ HSEK A+AF L+ T + + + KNIR+C DCH+A K
Sbjct: 759 APDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKL 818
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SKV +REI+VRD RFHHFRDG CSCGDYW
Sbjct: 819 ISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 153/321 (47%), Gaps = 15/321 (4%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
W L++ S+ + +A+ + ++L G+ P++FTL LK+ DD GRQVHA
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG---DD--GRQVHA 87
Query: 119 FCLKYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
K G D + +VG+SL+ MY R ++DDA +F + +N VSWNAL+A A G
Sbjct: 88 VAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGL 147
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
+ R E L P + +V A+ E G+ VH +KSG V N LV
Sbjct: 148 ELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLV 207
Query: 238 DMYAKSGSIEDAEKVFNRLLK---RDVVSWNSMLTGCAQHGLGKATVRWFEKML--RNGI 292
DMYAK G + DAE F R+VVSWN ML G A++G A +M G+
Sbjct: 208 DMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGV 267
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE-PEEAHYVTFVDLLGRAGLLDRAL 351
+++T L VL CS L + + A + + G+ + + GR G L A
Sbjct: 268 PADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHAC 327
Query: 352 KFIREMPIEPTAAVWGALLGA 372
+ + + W AL+GA
Sbjct: 328 RVFDGI-CSKMVSSWNALIGA 347
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 169/348 (48%), Gaps = 17/348 (4%)
Query: 10 EARIVHAHI--LGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
+ R VHA LG A D + N++++ Y +CG +D+A K+F+ M +++V+W AL++
Sbjct: 81 DGRQVHAVAAKLGLA-DGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAA 139
Query: 68 YSQNDQPENAIILFSQMLR-LG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
+ P + LF L LG P++ TL +VL A A + GR VH +K G
Sbjct: 140 VA---DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPET-GRAVHGLAVKSG 195
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALE---SKNEVSWNALIAGHARKSEGEKALR 181
+D V + L+DMYA+ +M DA F +N VSWN ++ G+AR E A
Sbjct: 196 WDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFG 255
Query: 182 TFSEMLRE--GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-FVGNTLVD 238
EM E G + SV + L + + +HA V++ G L V N L+
Sbjct: 256 LLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIA 315
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQV 297
Y + G + A +VF+ + + V SWN+++ AQ+G A + F +M G P+
Sbjct: 316 AYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWF 375
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
+ +L AC + L G+ + ++G+E + V+ + + + G
Sbjct: 376 SIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG 423
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 347/566 (61%), Gaps = 5/566 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L ++ A+ VH + F+ ++ ++ +++ Y+K GC+ AR+LF+ M +++V+W A
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNA 193
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDKFGRQVHAFCLK 122
++SGYS + E AI LF+ M R GL + +T+ S++ AS G + G +H F ++
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL--QVGTGIHGFIIR 251
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
GY+ + ++ ++L+D+Y + +DDA +F+ + K+ +W ++ G + ++A++
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKH 311
Query: 183 FSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++ML + + + ++ + +G+L+QG+ VHA IK+ FVG+ ++DMYA
Sbjct: 312 FNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
G++EDA++ F + ++DVV WN+M+ G +G G + F +M +G+ P++ TF+
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 302 VLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSHAG++ EG Q ++ ++K P HY +D+LGRAG LD A FI MP +
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P V+ LLGACR+H N++LG +++IFE++P+D+G ++LL+N+YA AG R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++ +KK+P S +E ++ F+A + HPQ I + + KIK+ GYVP+++
Sbjct: 552 ASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+L ++ L HSEK+A+AF L+ T PG+ I I KN+R C DCHSA KF SKV
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVF 671
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R ++++D NRFH F+DG CSC DYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 3/373 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
LK LK + +HA I+ S ++ + N+++NAY CG L +A+++F P K++V+WT L
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISG ++ND AI +F +M KPN T+SSVL A A + + VH F ++ G
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAF-ANLGLIRIAKSVHCFWVRGG 152
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ NV+V ++L+DMY++F M A LF ++ +N VSWNA+++G++ E+A+ F+
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M R+G ++ S+ A S G L+ G +H +I++G + + L+D+Y
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVL 303
++DA +VF+ + +DV +W MLTG + ++ F KML + + + + +L
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
++CSH+G L +G+ AL K +D+ G L+ A +F M E
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDV 391
Query: 364 AVWGALLGACRMH 376
W A++ M+
Sbjct: 392 VCWNAMIAGNGMN 404
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 6/221 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+H L++ R VHA + + F N+I + + +++ YA CG L++A++ F M KD+V W
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCW 394
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
A+I+G N +AI LF QM GL P++ T SVL A S AG + G Q+
Sbjct: 395 NAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE--GLQIFYHM 452
Query: 121 LKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+K +D N+ + ++D+ R Q+D A+ + + + + + G R K
Sbjct: 453 VKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTAL-ASTGSLEQGKWVHA 219
S+ + E EP Y + + + A G+ E K A
Sbjct: 513 GHEISQKIFE-MEPNDAGYYVLLSNMYALAGNWEGVKMTRA 552
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/628 (35%), Positives = 330/628 (52%), Gaps = 73/628 (11%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
LK R VH+ I+ + + ++ ++ AYA + ARK+FDE+P ++++ +I
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y N I +F M +KP+ +T VLKA + G+++H K G
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSG-NIVIGKKIHGSATKVGLSS 174
Query: 128 NVYVGSSLLDM-------------------------------YARFDQMDDAWFLFTALE 156
++VG+ L+ M YA+ + DDA + +E
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234
Query: 157 S-------------------------------------KNEVSWNALIAGHARKSEGEKA 179
S K+ VSWN +I + + + +A
Sbjct: 235 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 294
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ +S M +GFEP S +SV A T +L GK +H ++ + + N L+DM
Sbjct: 295 VELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 354
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YAK G ++ A VF + RDVVSW +M++ G G V F KM +G+ P+ + F
Sbjct: 355 YAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAF 414
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ L ACSHAGLL+EG+ F LM H + P H VDLLGRAG + A KFI+EMP
Sbjct: 415 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMP 474
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+EP VWGALLGACR+H N ++G AA+++F+L P SG ++LL+NIYA AGR +
Sbjct: 475 MEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTN 534
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R +MK G+KK P S VE +H F+ D +HPQ A I+++ + +K+K++GYVPD
Sbjct: 535 IRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPD 594
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTP---PGSTIHIKKNIRVCGDCHSAFKF 535
S L +++++E L VHSEKLA+ FAL++T + I I KN+R+CGDCH A K
Sbjct: 595 SESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKL 654
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCG 563
S++ REII+RDTNRFH FR G CSC
Sbjct: 655 ISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 150/358 (41%), Gaps = 27/358 (7%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
K F L VL D K R VH+ + +N +G L+ YA + A
Sbjct: 40 KETAFMLGQVLDT----YPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATAR 95
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + +N + N +I + + ++ F M +P H+++ V A + +G
Sbjct: 96 KVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSG 155
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
++ GK +H K G FVGN LV MY K G + +A V + + +RDVVSWNS++
Sbjct: 156 NIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVA 215
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA---GLLDEGQGYFALMKKHG 326
G AQ+ + +M I+ + T +L A S+ ++ +F + KK
Sbjct: 216 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 275
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGA 383
V + + + + + A++ M EP A ++L AC + LG
Sbjct: 276 VS-----WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGK 330
Query: 384 YAAERIFELDPHDSGPHILLAN----IYASAGRLNDAARARKMMKESGVKKEPACSWV 437
I + P++LL N +YA G L+ RAR + + +K SW
Sbjct: 331 KIHGYI---ERKKLIPNLLLENALIDMYAKCGCLD---RARDVFE--NMKSRDVVSWT 380
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I ++ ++N +++ YAKCGCLD AR +F+ M +D+V+W
Sbjct: 320 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSW 379
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TA+IS Y + + +A+ LFS+M GL P+ + L A S AG ++ GR C
Sbjct: 380 TAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEE--GRS----C 433
Query: 121 LK-----YGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
K Y + + ++D+ R ++ +A+ F+ NE W AL+
Sbjct: 434 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 313/554 (56%), Gaps = 41/554 (7%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + + + +YA G LD + LF + WTA+I G++
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A LF M P + +S +
Sbjct: 109 VVSAQQLFDTM------PEKSLVSL----------------------------------T 128
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
++L YA+ ++D A LF +E ++ V WN +I G+ + +AL F ML+ +P
Sbjct: 129 AMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 188
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SV +A G+LE G+WVH+++ +G Q VG LVDMY+K GS+EDA VF
Sbjct: 189 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 248
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+++ +DVV+WNSM+ G A HG + ++ F+ M R G+ P +TF+ +L+AC H+G +
Sbjct: 249 DKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 308
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG F MK ++G+EP+ HY V+LLGRAG +++A + ++ M IEP +WG LLGA
Sbjct: 309 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 368
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H + LG E + + + +SG +ILL+NIYA+ G + AR R MMK+SGVKKEP
Sbjct: 369 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 428
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CS +E N VH F+A HP+R I+ EI+ +K GY P + VL + E+E
Sbjct: 429 GCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKE 488
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L+VHSEKLA+AF LI+T PG+TI I KN+RVC DCH K SK+ R+I+VRD NRF
Sbjct: 489 RSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRF 548
Query: 553 HHFRDGFCSCGDYW 566
HHF +G CSCGDYW
Sbjct: 549 HHFVNGSCSCGDYW 562
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 40/262 (15%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA ++G D + + L YA ++D + LF ++ + W A+I GHA +
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ A + F M E + S +++ T
Sbjct: 108 DVVSAQQLFDTMP----EKSLVSLTAMLTC------------------------------ 133
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
YAK G ++ A +F+ + +RD V WN M+ G Q+G+ + F +ML+ P
Sbjct: 134 -----YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 188
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N+VT L VL+AC G L+ G+ + ++ +G++ VD+ + G L+ A + +
Sbjct: 189 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA-RLV 247
Query: 355 REMPIEPTAAVWGALLGACRMH 376
+ + W +++ MH
Sbjct: 248 FDKIDDKDVVAWNSMIVGYAMH 269
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VH++I + + ++ + +++ Y+KCG L++AR +FD++ KD+V W
Sbjct: 200 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 259
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I GY+ + + A+ LF M R+GL P T +L A G + +
Sbjct: 260 NSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 319
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
+YG + + ++++ R ++ A+ L + + V W L+ H + + GE
Sbjct: 320 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 379
Query: 178 KALRTFSE 185
K + +
Sbjct: 380 KIVELLVD 387
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/506 (41%), Positives = 322/506 (63%), Gaps = 7/506 (1%)
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK-FGRQVHAFCLKYGY 125
GY +N+ +++ LF M+ ++++ S + D+ +HA K G+
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229
Query: 126 DWNVYVGSSLLDMYARFDQMD--DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ N V +++LD YA+ D A +F +E ++ VSWN++IA +A+ +A+ +
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLY 288
Query: 184 SEMLR--EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
S+ML G + + S+V A A G+++ GK +H V++ G + +VG ++VDMY+
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYS 348
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E A + F ++ +++++SW++M+TG HG G+ + F +M R+G+ PN +TF+
Sbjct: 349 KCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFIS 408
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSHAGLLDEG+ ++ MK+ G+E HY VDLLGRAG LD A I+EM ++
Sbjct: 409 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 468
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AA+WGALL ACR+HKNVEL + +R+FELD +SG ++LL+NIYA A D R R
Sbjct: 469 PDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIR 528
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++K ++K P S E K +++F D +HPQ I+ ++ E++++ GYVP++
Sbjct: 529 LLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTG 588
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL D++E+E+ L++HSEKLA+AFAL+++ P S IHI KN+RVC DCH+A KF +K+
Sbjct: 589 SVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKIT 648
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
EREII+RD RFHHF+DG CSC DYW
Sbjct: 649 EREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 159/268 (59%), Gaps = 10/268 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGC--LDEARKLFDEMPVKDMVTWTALISGYSQN 71
+HA I F+ + + NT+L++YAK G L+ ARK+FD M +D+V+W ++I+ Y+QN
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQN 278
Query: 72 DQPENAIILFSQMLRL--GLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWN 128
AI L+S+ML + G+K N LS+VL A AGA + G+++H ++ G + N
Sbjct: 279 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAI--QTGKRIHNQVVRMGLEEN 336
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
VYVG+S++DMY++ +++ A F ++ KN +SW+A+I G+ G++AL F+EM R
Sbjct: 337 VYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKR 396
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGK-WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P + ++ SV A + G L++G+ W +A + G + +VD+ ++G ++
Sbjct: 397 SGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLD 456
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+A + + +K D W ++L+ C H
Sbjct: 457 EAYSLIKEMKVKPDAAIWGALLSACRIH 484
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H ++ + +H ++ + ++ + +I++ Y+KCG ++ A + F ++ K++++W
Sbjct: 312 CAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSW 371
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQ-VHAF 119
+A+I+GY + + + A+ +F++M R GL+PN T SVL A S AG D+ GR +A
Sbjct: 372 SAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDE--GRYWYNAM 429
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG 169
++G + V ++D+ R +D+A+ L ++ K + + W AL++
Sbjct: 430 KQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 480
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 335/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+ + + +D+ + +LN YAKCG +DEA ++FD+M +D+V W
Sbjct: 115 CTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCW 174
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I+G +QN Q A+ ++ QM + ++ + + +++A K G +H + +
Sbjct: 175 TTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTT-LGHSKMGLSIHGYMI 233
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ +V V +SL+DMYA+ ++ A +F + KN +SW+ALI+G A+ AL+
Sbjct: 234 RKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQ 293
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M G++P S SV A + G L+ GK VH ++++ ++DMY+
Sbjct: 294 LVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRL-HFDCVSSTAVIDMYS 352
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS+ A VF+++ RD +SWN+++ HG G+ + F +M + P+ TF
Sbjct: 353 KCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFAS 412
Query: 302 VLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+A SH+GL+++G+ +F++M ++ ++P E HY VDLL RAG ++ A + I M E
Sbjct: 413 LLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITE 472
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A+W ALL C H +G AA+++ EL+P D G + L++N +A+A R ++ A R
Sbjct: 473 PGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVR 532
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K+MK++G+KK P S +E +H F+ D +H Q I + ++ ++K +GYVP +
Sbjct: 533 KIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTE 592
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
VL +++ +E L HSE+LA+AF L++T PG+ + I KN+RVCGDCH A KF SK+V
Sbjct: 593 FVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIV 652
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD RFHHF+DG CSCGDYW
Sbjct: 653 NREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 181/353 (51%), Gaps = 13/353 (3%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
++ +YA+ G ++ AR++FD+ P + W A+I YS+ A+ L+ +M G++P+
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
T + VLKA + D + G + + GY +V+VG+++L++YA+ +MD+A +F
Sbjct: 105 SSTYTVVLKAC-TRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVF 163
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+ ++ V W +I G A+ + +A+ + +M ++ E + A + G +
Sbjct: 164 DKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK 223
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
G +H ++I+ + V +LVDMYAK+G +E A VF R+L ++V+SW+++++G A
Sbjct: 224 MGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFA 283
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
Q+G ++ M G P+ V+ + VL ACS G L G+ HG
Sbjct: 284 QNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSV------HGYIVRRL 337
Query: 333 HY-----VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE 380
H+ +D+ + G L A ++ + + W A++ + +H + E
Sbjct: 338 HFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSIS-WNAIIASYGIHGSGE 389
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
S LK + D+ ++HA + G + + L+ YAR ++ A +F
Sbjct: 7 SKSLKTLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSP 66
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+WNA+I ++R+ +AL + M EG P +Y+ V A + L G+
Sbjct: 67 QCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEE 126
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGL 276
+ G FVG ++++YAK G +++A +VF+++ +RD+V W +M+TG AQ+G
Sbjct: 127 TWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQ 186
Query: 277 GKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT 336
+ V + +M + + + V L ++ AC+ G G M + + + +
Sbjct: 187 AREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTS 246
Query: 337 FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
VD+ + G L+ A R M + + W AL+
Sbjct: 247 LVDMYAKNGHLELASCVFRRMLYKNVIS-WSALI 279
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/569 (36%), Positives = 337/569 (59%), Gaps = 5/569 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C+H ++KE H + +++ +++ Y++C ++ A ++ D +P V D+
Sbjct: 127 CSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDI 186
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
++ ++++ ++ + E A+ + +M+ + + T V+ A D + G +VHA
Sbjct: 187 FSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLC-AQIRDLQLGLRVHA 245
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L+ G ++ +VGS L+DMY + ++ +A +F L+++N V W AL+ + + E+
Sbjct: 246 RLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEE 305
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+L F+ M REG P ++++ + A A +L G +HA V K G + V N L++
Sbjct: 306 SLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALIN 365
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY+KSGSI+ + VF ++ RD+++WN+M+ G + HGLGK ++ F+ M+ PN VT
Sbjct: 366 MYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVT 425
Query: 299 FLCVLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F+ VL+A SH GL+ EG Y LM+ +EP HY V LL RAGLLD A F++
Sbjct: 426 FIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTT 485
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
++ W LL AC +H+N +LG AE + ++DPHD G + LL+N+YA A R +
Sbjct: 486 QVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVV 545
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
RK+M+E +KKEP SW++ +N +H+F++ HP+ I+KK +++ IK +GYVP
Sbjct: 546 TIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVP 605
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
+ + VL + +++E L HSEKLALA+ L+ P + I I KN+R+C DCH+A K S
Sbjct: 606 NIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLIS 665
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KV R IIVRD NRFHHFRDG C+C D+W
Sbjct: 666 KVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 186/376 (49%), Gaps = 9/376 (2%)
Query: 2 CTHLKKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
C +K L + +HA L ++ + I+ N++++ Y KCG L AR LFD MP++++
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
V+W L++GY ++LF M+ L PN++ ++ L A G K G Q H
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGR-VKEGMQCH 140
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEV-SWNALIAGHARKS 174
K+G + YV S+L+ MY+R ++ A + + E N++ S+N+++
Sbjct: 141 GLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESG 200
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
GE+A+ M+ E H +Y V A L+ G VHA +++ G FVG+
Sbjct: 201 RGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGS 260
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
L+DMY K G + +A VF+ L R+VV W +++T Q+G + ++ F M R G P
Sbjct: 261 MLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLP 320
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
N+ TF +L AC+ L G A ++K G + +++ ++G +D +
Sbjct: 321 NEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVF 380
Query: 355 REMPIEPTAAVWGALL 370
+M I W A++
Sbjct: 381 TDM-IYRDIITWNAMI 395
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/555 (36%), Positives = 329/555 (59%), Gaps = 3/555 (0%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
+VH + + + ++ ++ N +L+ Y+ C K+F M K++V+WTA+I+ Y++
Sbjct: 106 VVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAG 165
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ LF +M G++P+ F ++S L A AG K G+ VH + ++ G + + V
Sbjct: 166 HFDKVAGLFQEMGLEGIRPDVFAITSALDAF-AGNESLKHGKSVHGYAIRNGIEEVLPVA 224
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++L++MY + M++A F+F + K+ +SWN LI G++R + +A F+EML +
Sbjct: 225 NALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LR 283
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P + + + A AS SLE+G+ +HA+ ++ G FV N LVDMY K G++ A ++
Sbjct: 284 PNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRL 343
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ L ++++SW M+ G HG G+ + FE+M +GI P+ +F +L ACSH+GL
Sbjct: 344 FDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLR 403
Query: 313 DEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
DEG +F M+ +H +EP+ HY VDLL G L A +FI MPIEP +++W +LL
Sbjct: 404 DEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLR 463
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+H+NV+L AE +FEL+P ++G ++LLANIYA A R + + + G+++
Sbjct: 464 GCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLREN 523
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
CSW+E + H+F A + HPQ I + +++ ++++ G+ P + L AD
Sbjct: 524 TGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVH 583
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
+ L HS KLA+AF +++ G I + KN RVC CH A KF SK+ REII+RD+NR
Sbjct: 584 DEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNR 643
Query: 552 FHHFRDGFCSCGDYW 566
FHHF +G CSC YW
Sbjct: 644 FHHFEEGRCSCRGYW 658
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 3/364 (0%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
+VH +++ F A+ N +++ YAK +++A +FDEMP +D+++W ++I G + N
Sbjct: 5 VVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNG 64
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ A+ LF +M G + + TL SV+ A + G VH + ++ G +G
Sbjct: 65 LYDKAVELFVRMWLEGQELDSTTLLSVMPAC-VQSHYSFIGGVVHGYSVRTGLISETSLG 123
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++LLDMY+ +F +E KN VSW A+I + R +K F EM EG
Sbjct: 124 NALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIR 183
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P F+ +S A A SL+ GK VH + I++G + V V N L++MY K G +E+A +
Sbjct: 184 PDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFI 243
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ + K+D +SWN+++ G ++ L F +ML + PN VT C+L A + L
Sbjct: 244 FDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSL 302
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+ G+ A + G + VD+ + G L A + +M W ++
Sbjct: 303 ERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLF-DMLTNKNLISWTIMIAG 361
Query: 373 CRMH 376
MH
Sbjct: 362 YGMH 365
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 156/272 (57%), Gaps = 6/272 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ LK + VH + + + + + + N ++ Y KCG ++EAR +FD + KD ++W LI
Sbjct: 200 ESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLI 259
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GYS+++ A LF++ML L L+PN T++ +L A+ + ++ ++ GR++HA+ ++ GY
Sbjct: 260 GGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLER-GREMHAYAVRRGY 317
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ +V ++L+DMY + + A LF L +KN +SW +IAG+ G A+ F +
Sbjct: 318 LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQ 377
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKS 243
M G +P S+S++ A + +G ++G W + +++ ++ + + +VD+ +
Sbjct: 378 MKGSGIQPDAGSFSAILYACSHSGLRDEG-WRFFNAMRNEHRIEPKLKHYACMVDLLCHT 436
Query: 244 GSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
G++++A + + ++ D W S+L GC H
Sbjct: 437 GNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 6/311 (1%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G VH + +KYG+ V ++L+ YA+ ++++DA +F + ++ +SWN++I G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+KA+ F M EG E + SV A + G VH + +++G +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
GN L+DMY+ K+F + +++VVSW +M+T + G F++M GI
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+ L A + L G+ ++G+E +++ + G ++ A +
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA-R 241
Query: 353 FIREMPIEPTAAVWGALLGA-CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
FI + + W L+G R + E E + +L P+ + +A I +A
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNA----VTMACILPAAA 297
Query: 412 RLNDAARARKM 422
L+ R R+M
Sbjct: 298 SLSSLERGREM 308
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ R +HA+ + + D + N +++ Y KCG L AR+LFD + K++++WT +
Sbjct: 299 LSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIM 358
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+GY + + +AI LF QM G++P+ + S++L A D+ R +A ++
Sbjct: 359 IAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHR 418
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ + + ++D+ + +A+ F+ T + W +L+ G R K
Sbjct: 419 IEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG-CRIHRNVKLAEKV 477
Query: 184 SEMLREGFEPTHFSY 198
+EM+ E EP + Y
Sbjct: 478 AEMVFE-LEPENTGY 491
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 325/558 (58%), Gaps = 2/558 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E + H + L S + ++N ++ Y+KC + A ++ +P D+ + +++G
Sbjct: 141 EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLL 200
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
Q+ A+ + ++ G++ N T ++ + A D G+QVHA LK D +V
Sbjct: 201 QHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLC-ASLKDITLGKQVHAQMLKSDIDCDV 259
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
Y+GSS++DMY + + F L+S+N VSW ++IA + + E+AL FS+M +
Sbjct: 260 YIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEID 319
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
P ++ + +F + A +L G +HA KSG + VGN L+ MY KSG I A
Sbjct: 320 CIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAA 379
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
+ VF+ + ++++WN+++TG + HGLGK + F+ M+ G PN VTF+ V+ AC+H
Sbjct: 380 QSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHL 439
Query: 310 GLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
L+DEG YF LMK+ + P HY V LL R+G LD A F+R I W
Sbjct: 440 KLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRT 499
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL AC +HK+ + G AE + +L+P D G +ILL+N++A R + RK+M+E V
Sbjct: 500 LLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNV 559
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KKEP SW+E +N H+F + D HP+ +I++ +++ KI+ +GYVPD +VL +
Sbjct: 560 KKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIED 619
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+++ L HSEKLA+A+ L+ TP G+ I + KN+R+C DCH+A K SKV R I+VRD
Sbjct: 620 EQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRD 679
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFHHF++G CSCGDYW
Sbjct: 680 ANRFHHFQNGCCSCGDYW 697
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 174/327 (53%), Gaps = 6/327 (1%)
Query: 6 KKLKEARIVHAH--ILGSAFKNDIAMQ-NTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
K LK R +HAH I +++ Q N+++N Y KC + ARKLFD MP +++V+W+
Sbjct: 33 KNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWS 92
Query: 63 ALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL++GY QN P LF +M ++ + PN++ +++ + + + + G+Q H + L
Sbjct: 93 ALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE--GKQCHGYAL 150
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G +++ YV ++L+ +Y++ + A + + + +N ++ G + + +A+
Sbjct: 151 KSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVD 210
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++ EG E + +Y ++F AS + GK VHA ++KS ++G++++DMY
Sbjct: 211 VLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYG 270
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ F+RL R+VVSW S++ Q+ + + F KM + I PN+ T
Sbjct: 271 KCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAV 330
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVE 328
+ + + L G A +K G++
Sbjct: 331 LFNSAAGLSALCLGDQLHARAEKSGLK 357
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK + + VHA +L S D+ + ++I++ Y KCG + R FD + +++V+W
Sbjct: 234 CASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSW 293
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+ Y QN+ E A+ LFS+M + PN++T+ +VL S AG + G Q+HA
Sbjct: 294 TSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTM-AVLFNSAAGLSALCLGDQLHARAE 352
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G NV VG++L+ MY + + A +F+ + N ++WNA+I GH+ G++AL
Sbjct: 353 KSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALS 412
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +M+ G P + ++ V A A +++G + H++K + T +V +
Sbjct: 413 MFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLL 472
Query: 241 AKSGSIEDAEKVF-NRLLKRDVVSWNSMLTGCAQH 274
++SG +++AE + + DVVSW ++L C H
Sbjct: 473 SRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVH 507
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 337/578 (58%), Gaps = 15/578 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ ++ + VHA+++ D ++ N++ + Y+K L+ A K F + KD+++W
Sbjct: 175 CSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISW 234
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++IS N Q ++ F ML G+KPN++TL+SVL A T D G Q+H+ +
Sbjct: 235 TSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD-LGAQIHSLSI 293
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE------ 175
K GY ++ + +S++ +Y + + +A LF +E+ N V+WNA+IAGHA+ +
Sbjct: 294 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 353
Query: 176 -----GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
G AL F ++ R G +P F++SSV + ++ +LEQG+ +H +IKSG
Sbjct: 354 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADV 413
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
VG LV MY K GSI+ A K F + R ++SW SM+TG A+HGL + ++ FE M
Sbjct: 414 VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV 473
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDR 349
GI PNQVTF+ VL+ACSHAGL DE YF LM K++ ++P H+ +D+ R G ++
Sbjct: 474 GIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEE 533
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A + +M EP +W L+ CR H +LG YAAE++ +L P D ++ L N++ S
Sbjct: 534 AFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHIS 593
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
AGR D ++ RK+MKE V K SW+ K V+ F ND +H Q ++K + +
Sbjct: 594 AGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNE 653
Query: 470 IKQIGYVP--DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCG 527
+K +GY P D + +++ + +HSEKLA+AF L++ P + I + K+I +C
Sbjct: 654 VKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCR 713
Query: 528 DCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
DCH+ +F S + REI++RD+ + H F +G+CSCG Y
Sbjct: 714 DCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 210/387 (54%), Gaps = 13/387 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C EAR++H HI+ + F D+ + ++N Y+KCG ++ A K+FD +P +++
Sbjct: 73 ECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNA 132
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L++GY QN P A+ LF +ML G P+ +TL VL A + + + FG+QVHA+
Sbjct: 133 WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE-FGKQVHAYL 191
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+KY D++ +G+SL Y++F +++ A F ++ K+ +SW ++I+ + ++L
Sbjct: 192 IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSL 251
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML +G +P ++ +SV +A +L+ G +H+ IK G + N+++ +Y
Sbjct: 252 SFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLY 311
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTG-----------CAQHGLGKATVRWFEKMLR 289
K G + +A+K+F + ++V+WN+M+ G A H G + F+K+ R
Sbjct: 312 LKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR 371
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ P+ TF VL+ CS+ L++G+ + K GV + V + + G +D+
Sbjct: 372 SGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDK 431
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMH 376
A K EMP T W +++ H
Sbjct: 432 ASKAFLEMP-SRTMISWTSMITGFARH 457
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 329/556 (59%), Gaps = 6/556 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
K K+ + +HA ++ + F ++ +L G + AR++FDEMP + W L
Sbjct: 23 KPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFK 82
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGY 125
GY +N P +++L+ +M LG++P++FT V+KA S G G +HA LK G+
Sbjct: 83 GYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVL--PCGVSLHAHVLKNGF 140
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ V + L+ MY +F ++ A FLF +++ K+ V+WNA IA + AL F++
Sbjct: 141 ECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNK 200
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M + + F+ S+ +A GSL+ G+ ++ K + V N +DM+ K GS
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGS 260
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
E A +F+ + +R+VVSW++M+ G A +G + F M G+ PN VTFL VL+A
Sbjct: 261 TEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSA 320
Query: 306 CSHAGLLDEGQGYFALMKK---HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
CSHAGL++EG+ YF+LM + +EP + HY VDLLGR+GLL+ A +FI++M +EP
Sbjct: 321 CSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPD 380
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
+WGALLGAC +H+++ LG A+ + E P H+LL+NIYA+AG+ + + R
Sbjct: 381 TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSK 440
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M++ G KK A S VE +H F D +HPQ I++K EI +KI+ +GYVPD+ V
Sbjct: 441 MRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSV 500
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
+ +E+E+ L HSEKLA+AF LI+ G I + KN+R C DCH KF S++ R
Sbjct: 501 FHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLTSR 560
Query: 543 EIIVRDTNRFHHFRDG 558
EII+RD NRFHHFR+G
Sbjct: 561 EIIMRDKNRFHHFRNG 576
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTAL 155
LS +L+AS ++ K +++HA ++ G+ + + LL+ M A +F +
Sbjct: 13 LSELLRAS---SSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEM 69
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
WN L G+ R +++ + +M G P F+Y V A++ G L G
Sbjct: 70 PKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGV 129
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
+HAHV+K+G + + V LV MY K G + AE +F + +D+V+WN+ + C Q G
Sbjct: 130 SLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTG 189
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+ +F KM + + + T + +L+AC G LD G+ + +K +E
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIE 242
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L ++ + +I ++N L+ + KCG + AR LFD+M +++V+W
Sbjct: 220 CGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSW 279
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+ +I GY+ N A+ LF+ M GL+PN T VL A S AG ++ G++ +
Sbjct: 280 STMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNE--GKRYFSLM 337
Query: 121 LKYGYDWNVYVG----SSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHA 171
++ D N+ + ++D+ R +++A+ + + + W AL+ A
Sbjct: 338 VRLN-DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACA 392
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/593 (36%), Positives = 336/593 (56%), Gaps = 38/593 (6%)
Query: 10 EARIVHAHILGSAFKND-IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY 68
E + +HA +L S D AM + + F+ D W +I G
Sbjct: 26 ELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGL 85
Query: 69 SQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDW 127
S +DQP+ +++L+ +ML N +T +LKA S A + Q+HA K+GY
Sbjct: 86 SCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQET--TQIHAHITKFGYGH 143
Query: 128 NVYVGSSLLDMYA----------RFD---------------------QMDDAWFLFTAL- 155
++Y +SL++ YA FD +MD A LF +
Sbjct: 144 DIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMP 203
Query: 156 ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
E N +SW +I+G+ + ++AL+ F EM P + S +S +A + G+LEQGK
Sbjct: 204 EKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGK 263
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
W+H++ K+ ++ + + L+DMYAK G +E+A VF + + V W ++++G A HG
Sbjct: 264 WIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHG 323
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHY 334
LG+ + F +M G+ PN +TF VLTACS+ GL++EG+ F +++ + ++P HY
Sbjct: 324 LGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHY 383
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDP 394
VDLLGRAGLL+ A +FI++MP++P A +WG+LL AC++HKN+ELG E + E+D
Sbjct: 384 GCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDS 443
Query: 395 HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHP 454
+ G ++ +ANI+A + + AA R++M+E GV K P CS + + H F+A D +H
Sbjct: 444 NHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHA 503
Query: 455 QRAMIHKKWREISEKIKQIGYVPD-SSHVLSYADQQEREAKLQVHSEKLALAFALISTPP 513
+ I KWR + K+++ GYVP+ +L D +E+EA + HSEKLA+ + L+ T P
Sbjct: 504 EIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKP 563
Query: 514 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
G+TI I KN+RVC DCH SK+ +R+I++RD RFHHF+DG CSCGDYW
Sbjct: 564 GTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 39/309 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C++L +E +HAHI + +DI N+++N+YA G A LFD + D V+W
Sbjct: 120 CSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSW 179
Query: 62 TA--------------------------------LISGYSQNDQPENAIILFSQMLRLGL 89
+ +ISGY Q + A+ LF +M +
Sbjct: 180 NSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNV 239
Query: 90 KPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
P+ +L+S L A S GA + G+ +H++ K + + L+DMYA+ +M++A
Sbjct: 240 PPDNVSLASALSACSQLGALEQ--GKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEA 297
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F +++K+ W ALI+G+A G +A+ F EM G +P ++++V TA + T
Sbjct: 298 LGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYT 357
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWN 265
G +E+GK V + I+ L + + +VD+ ++G + +A + ++ LK + V W
Sbjct: 358 GLVEEGKSVF-NTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWG 416
Query: 266 SMLTGCAQH 274
S+L C H
Sbjct: 417 SLLKACQIH 425
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L++ + +H++ + + D + +++ YAKCG ++EA +F M K + W
Sbjct: 253 CSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVW 312
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TALISGY+ + AI F +M +G+KPN T ++VL A ++ +
Sbjct: 313 TALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIER 372
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
Y + ++D+ R +++A + K N V W +L+ H GE
Sbjct: 373 DYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGE 432
Query: 178 KALRTFSEM 186
K EM
Sbjct: 433 KIGEILIEM 441
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 32/209 (15%)
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF-N 254
F++ + L + + K +HA ++KSG + + S A VF N
Sbjct: 9 FAFEHNLSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFN 68
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDE 314
+ D WN M+ G + ++ + +ML N TF +L ACS+ E
Sbjct: 69 GFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQE 128
Query: 315 GQGYFALMKKHGV-------------------------------EPEEAHYVTFVDLLGR 343
A + K G EP+ + + + +
Sbjct: 129 TTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVK 188
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGA 372
AG +D AL R+MP + A W ++
Sbjct: 189 AGEMDMALTLFRKMPEKNNAISWTTMISG 217
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 337/578 (58%), Gaps = 15/578 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ ++ + VHA+++ D ++ N++ + Y+K L+ A K F + KD+++W
Sbjct: 169 CSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISW 228
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++IS N Q ++ F ML G+KPN++TL+SVL A T D G Q+H+ +
Sbjct: 229 TSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD-LGAQIHSLSI 287
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE------ 175
K GY ++ + +S++ +Y + + +A LF +E+ N V+WNA+IAGHA+ +
Sbjct: 288 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 347
Query: 176 -----GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
G AL F ++ R G +P F++SSV + ++ +LEQG+ +H +IKSG
Sbjct: 348 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADV 407
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
VG LV MY K GSI+ A K F + R ++SW SM+TG A+HGL + ++ FE M
Sbjct: 408 VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV 467
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDR 349
GI PNQVTF+ VL+ACSHAGL DE YF LM K++ ++P H+ +D+ R G ++
Sbjct: 468 GIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEE 527
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A + +M EP +W L+ CR H +LG YAAE++ +L P D ++ L N++ S
Sbjct: 528 AFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHIS 587
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
AGR D ++ RK+MKE V K SW+ K V+ F ND +H Q ++K + +
Sbjct: 588 AGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNE 647
Query: 470 IKQIGYVP--DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCG 527
+K +GY P D + +++ + +HSEKLA+AF L++ P + I + K+I +C
Sbjct: 648 VKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCR 707
Query: 528 DCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
DCH+ +F S + REI++RD+ + H F +G+CSCG Y
Sbjct: 708 DCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 210/387 (54%), Gaps = 13/387 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C EAR++H HI+ + F D+ + ++N Y+KCG ++ A K+FD +P +++
Sbjct: 67 ECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNA 126
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L++GY QN P A+ LF +ML G P+ +TL VL A + + + FG+QVHA+
Sbjct: 127 WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE-FGKQVHAYL 185
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+KY D++ +G+SL Y++F +++ A F ++ K+ +SW ++I+ + ++L
Sbjct: 186 IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSL 245
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +ML +G +P ++ +SV +A +L+ G +H+ IK G + N+++ +Y
Sbjct: 246 SFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLY 305
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTG-----------CAQHGLGKATVRWFEKMLR 289
K G + +A+K+F + ++V+WN+M+ G A H G + F+K+ R
Sbjct: 306 LKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR 365
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ P+ TF VL+ CS+ L++G+ + K GV + V + + G +D+
Sbjct: 366 SGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDK 425
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMH 376
A K EMP T W +++ H
Sbjct: 426 ASKAFLEMP-SRTMISWTSMITGFARH 451
>gi|15240665|ref|NP_199850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171167|sp|Q9FK33.1|PP427_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50390, chloroplastic; Flags: Precursor
gi|9758921|dbj|BAB09458.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008555|gb|AED95938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 334/570 (58%), Gaps = 6/570 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C LK ++ + V+ ++ + F+ + M N IL + KCG + +AR+LFDE+P +++ ++
Sbjct: 133 CIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSY 192
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISG+ A LF M T + +L+AS AG G+Q+H L
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRAS-AGLGSIYVGKQLHVCAL 251
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G N +V L+DMY++ ++DA F + K V+WN +IAG+A E+AL
Sbjct: 252 KLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALC 311
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
+M G F+ S + LE K HA +I++G + LVD Y+
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G ++ A VF++L +++++SWN+++ G A HG G V+ FEKM+ +APN VTFL
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLA 431
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL+AC+++GL ++G F M + HG++P HY ++LLGR GLLD A+ FIR P++
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
T +W ALL ACRM +N+ELG AE+++ + P G ++++ N+Y S G+ +AA
Sbjct: 492 TTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVL 551
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVAND--DAHPQ--RAMIHKKWREISEKIKQIGYV 476
+ ++ G+ PAC+WVE + H F++ D D++ + + I++K E+ E+I + GY
Sbjct: 552 ETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYS 611
Query: 477 PDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
+ H+L D++E E + HSEKLA+A+ L++TP + + I +N R+C +CH +F
Sbjct: 612 EEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFI 671
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S V RE++VRD +RFHHF++G CSCG YW
Sbjct: 672 SLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/601 (36%), Positives = 333/601 (55%), Gaps = 40/601 (6%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
LK + VHA +L D + N +L G + + ++F + ++ + +
Sbjct: 20 FNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTM 79
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I G ND + +I ++ M + GL P+ FT +LKA A D K G ++H +K G
Sbjct: 80 IHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKAC-ARLLDSKLGIKLHGLVVKAG 138
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE------------------------ 160
+ + +V +SL+ +Y + +D+A+ +F + KN
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 161 --------------VSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
VSW+++I G+A ++AL F +ML EGF P ++ V A A
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
G+LE G W + ++ +G L+DMYAK G ++ A +VF + K+D+V WN+
Sbjct: 259 RLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNA 318
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-H 325
++G A G KA F +M ++GI P+ TF+ +L AC+HAGL+DEG+ YF M++
Sbjct: 319 AISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVF 378
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+ PE HY VDLLGRAG LD A + ++ MP+E A VWGALLG CR+H++ +L
Sbjct: 379 TLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGV 438
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
+++ L+P +SG ++LL+NIY+++ + DAA+ R +M E G+KK P SW+E VH
Sbjct: 439 LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHE 498
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F+ D +HP I+ K E+ + +K GYVP + +VL +++E+E + HSEKLA+A
Sbjct: 499 FLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIA 558
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F LIST P I + KN+RVCGDCH A K S+ REIIVRD NRFH F DG CSC DY
Sbjct: 559 FGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDY 618
Query: 566 W 566
W
Sbjct: 619 W 619
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 47/316 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L K +H ++ + ++D + ++++ Y KCG +D A K+FD++P K++ W
Sbjct: 118 CARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAW 177
Query: 62 TALIS--------------------------------------GYSQNDQPENAIILFSQ 83
TA+IS GY+ N P+ A+ LF +
Sbjct: 178 TAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFK 237
Query: 84 MLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARF 142
ML G +P+ + + VL A GA + G + + N +G++L+DMYA+
Sbjct: 238 MLNEGFRPDCYAMVGVLCACARLGALE--LGNWASNLMDRNEFLGNPVLGTALIDMYAKC 295
Query: 143 DQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVF 202
+MD AW +F + K+ V WNA I+G A + A F +M + G EP ++ +
Sbjct: 296 GRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLL 355
Query: 203 TALASTGSLEQGKWVH---AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LK 258
A G +++G+ V ++ + +VD+ ++G +++A ++ + ++
Sbjct: 356 CACTHAGLVDEGRQYFNSMERVFTLTPEIEHY--GCMVDLLGRAGFLDEAHQLVKSMPME 413
Query: 259 RDVVSWNSMLTGCAQH 274
+ + W ++L GC H
Sbjct: 414 ANAIVWGALLGGCRLH 429
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/598 (37%), Positives = 339/598 (56%), Gaps = 41/598 (6%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVTWTALIS 66
L + + +HA ++ + ++ ++++Y C L AR +FD+ P + + W +I
Sbjct: 68 LTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQ 127
Query: 67 GYSQNDQPENAIILFSQMLRLGLKP---NQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
YS+ + ++ LF QML G +P +++T + V A T +G VH +K
Sbjct: 128 AYSKTPSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKD 186
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDA--------------WF-----------------LF 152
GY+ +++VG+SL++MY+ F +M DA W LF
Sbjct: 187 GYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELF 246
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSL 211
+ +N+VSW ++AG+ +AL+ F++ML + +P S+ +A A G+L
Sbjct: 247 DMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGAL 306
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+QGKW+H ++ K+ L + + L+DMYAK G I+ A +VF+ L KRD+++W SM++G
Sbjct: 307 DQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGL 366
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPE 330
+ HGLG + F +ML G P+ +T L VL CSH+GL++EG F ++ G+ P+
Sbjct: 367 SMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPK 426
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIF 390
HY +DLLGRAG L+ A + I+ MP+EP W ALL ACR+H +V+LG I
Sbjct: 427 LEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIA 486
Query: 391 ELDPHD-SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
EL P G ++LL+N+YAS G+ + RK M + G + P CSW+E VH F+A
Sbjct: 487 ELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAA 546
Query: 450 DDAHPQRAMIHKKWREISEKIK-QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFAL 508
D HP+ + I+KK E+ +I + GYVP + VL +++++E + HSEKLA+AF L
Sbjct: 547 DKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGL 606
Query: 509 ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ST G TI I KN+R C DCHSA K S V REI+VRD +RFH FR G CSC DYW
Sbjct: 607 LSTQEG-TIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + + +H +I + + +++ YAKCG +D AR++FD + +D++TW
Sbjct: 300 CAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTW 359
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++ISG S + + FS+ML G KP+ TL VL ++ H
Sbjct: 360 TSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIP 419
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALES----KNEVSWNALIAG---HARKS 174
+G + L+D+ R +++ A F A++S + V+W AL++ H
Sbjct: 420 LWGIVPKLEHYGCLIDLLGRAGRLESA---FEAIKSMPMEPDVVAWRALLSACRIHGDVD 476
Query: 175 EGEKALRTFSEM 186
GE+ + +E+
Sbjct: 477 LGERIINHIAEL 488
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/536 (39%), Positives = 329/536 (61%), Gaps = 3/536 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H + + F D ++ N IL+ Y+K + E R LF+EMP D V++ +IS YSQ +Q
Sbjct: 266 LHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQ 325
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E ++ LF +M +G F +++L + A + + GRQVH + D ++VG+
Sbjct: 326 YEESLNLFREMQCMGFDRRNFPFATMLSIA-ANLSSLQVGRQVHCQAIVATADSILHVGN 384
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMYA+ + D+A +F +L ++ VSW ALI+G+ +K L+ F++M
Sbjct: 385 SLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRA 444
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
++++V A A SL GK +HA +I+SG F G+ LVDMYAK GSI+DA +VF
Sbjct: 445 DQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 504
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ R+ VSWN++++ A +G G+A + F KM+++G+ P+ V+ L VL ACSH G ++
Sbjct: 505 EEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVE 564
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G +F M +G+ P++ HY +DLLGR G A K + EMP EP +W ++L A
Sbjct: 565 QGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 624
Query: 373 CRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR++KN L AAE++F ++ D+ ++ ++NIYA+AG+ + +K M+E G+KK
Sbjct: 625 CRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKV 684
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQER 491
PA SWVE + +H+F +ND HP I KK E++ +I++ GY PD+S V+ D+Q +
Sbjct: 685 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMK 744
Query: 492 EAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVR 547
L+ HSE+LA+AFALISTP G I + KN+R C DCH+A K SK+V+R I +
Sbjct: 745 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 191/361 (52%), Gaps = 4/361 (1%)
Query: 14 VHAHILGSAFKNDIAMQ--NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
VHA + F ++ + N +L +Y + LD A LF+E+ KD VT+ LI+GY ++
Sbjct: 163 VHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKD 222
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV 131
AI LF +M + G KP+ FT S VLKA G D G+Q+H + G+ + V
Sbjct: 223 GLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAV-VGLHDFALGQQLHGLSVTTGFSRDASV 281
Query: 132 GSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF 191
G+ +L Y++ D++ + LF + + VS+N +I+ +++ + E++L F EM GF
Sbjct: 282 GNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGF 341
Query: 192 EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEK 251
+ +F ++++ + A+ SL+ G+ VH I + + VGN+LVDMYAK ++AE
Sbjct: 342 DRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAEL 401
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F L +R VSW ++++G Q GL A ++ F KM + +Q TF VL A +
Sbjct: 402 IFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFAS 461
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
L G+ A + + G VD+ + G + A++ EMP + A W AL+
Sbjct: 462 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALIS 520
Query: 372 A 372
A
Sbjct: 521 A 521
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 3/270 (1%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L L+ R VH + + + + + N++++ YAKC DEA +F + + V+WTA
Sbjct: 357 NLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTA 416
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LISGY Q + LF++M L+ +Q T ++VLKAS AG G+Q+HAF ++
Sbjct: 417 LISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKAS-AGFASLLLGKQLHAFIIRS 475
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G NV+ GS L+DMYA+ + DA +F + +N VSWNALI+ +A +GE A+ F
Sbjct: 476 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAF 535
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
++M++ G +P S V A + G +EQG ++ A G ++D+ +
Sbjct: 536 TKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGR 595
Query: 243 SGSIEDAEKVFNRL-LKRDVVSWNSMLTGC 271
+G +AEK+ + + + D + W+S+L C
Sbjct: 596 NGRFAEAEKLMDEMPFEPDEIMWSSVLNAC 625
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 151/295 (51%), Gaps = 4/295 (1%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
KN ++ NT+++ Y K G L AR LFD MP + +VTWT L+ Y+ N+ + A LF Q
Sbjct: 73 KNTVS-TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQ 131
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY--VGSSLLDMYAR 141
M R P+ T +++L + G QVHAF +K G+D N++ V + LL Y
Sbjct: 132 MCRSCTLPDYVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNLFLTVCNVLLKSYCE 190
Query: 142 FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSV 201
++D A LF + K+ V++N LI G+ + +A+ F +M + G +P+ F++S V
Sbjct: 191 VRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGV 250
Query: 202 FTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDV 261
A+ G+ +H + +G A VGN ++ Y+K + + +FN + + D
Sbjct: 251 LKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDF 310
Query: 262 VSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
VS+N +++ +Q + ++ F +M G F +L+ ++ L G+
Sbjct: 311 VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGR 365
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 338/578 (58%), Gaps = 15/578 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ LK HA+I+ D ++ + + + Y+KCG L++A K F + K++++W
Sbjct: 178 CSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISW 237
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+ +S + N P + LF +M+ + +KPN+FTL+S L + + G QV++ C+
Sbjct: 238 TSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSAL-SQCCEILSLELGTQVYSLCI 296
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE------ 175
K+GY+ N+ V +SLL +Y + + +A LF ++ + V+WNA+IAGHA+ E
Sbjct: 297 KFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNL 356
Query: 176 -----GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
G +AL+ FS++ G +P F+ SSV + + ++EQG+ +HA IK+G
Sbjct: 357 SACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDV 416
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V +L+ MY+K GSIE A K F + R +++W SM+TG +QHG+ + + FE M
Sbjct: 417 IVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLA 476
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ PN VTF+ VL+ACSHAG++ + YF +M KK+ ++P HY VD+ R G L++
Sbjct: 477 GVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQ 536
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
AL FI++M EP+ +W + C+ H N+ELG YAAE++ L P D ++LL N+Y S
Sbjct: 537 ALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLS 596
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
A R D +R RKMM+E V K SW+ K+ V+ F N HPQ ++I K ++ K
Sbjct: 597 AERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAK 656
Query: 470 IKQIGY--VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCG 527
+K +GY + ++++ + HSEKLA+ F L + P S I + K+ +C
Sbjct: 657 VKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITFGLENLPNSSPIRVVKSTLICR 716
Query: 528 DCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
D H+ K+ S + REIIV+D+ R H F +G CSCG++
Sbjct: 717 DSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGNF 754
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 206/387 (53%), Gaps = 13/387 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + E +IVH H++ + ++ + + ++N YAKCG +++AR++FD M +++V
Sbjct: 76 QCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVA 135
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L+ G+ QN QP++AI +F +ML G P+ +TLS+VL A + K G Q HA+
Sbjct: 136 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHAC-SSLQSLKLGDQFHAYI 194
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+KY D++ VGS+L +Y++ +++DA F+ + KN +SW + ++ A K L
Sbjct: 195 IKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGL 254
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F EM+ +P F+ +S + SLE G V++ IK G + V N+L+ +Y
Sbjct: 255 RLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLY 314
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH-----------GLGKATVRWFEKMLR 289
KSG I +A ++FNR+ +V+WN+M+ G AQ G ++ F K+
Sbjct: 315 LKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNL 374
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ P+ T VL+ CS +++G+ A K G + + + + + G ++R
Sbjct: 375 SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIER 434
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMH 376
A K EM T W +++ H
Sbjct: 435 ASKAFLEMSTR-TMIAWTSMITGFSQH 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + T S + + VH HV+K+G FV + LV++YAK G++EDA +VF+ +L
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R+VV+W +++ G Q+ K + F++ML G P+ T VL ACS L G
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ A + K+ V+ + + L + G L+ ALK + E W + + AC
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIR-EKNVISWTSAVSAC 244
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/571 (36%), Positives = 339/571 (59%), Gaps = 14/571 (2%)
Query: 2 CTHLKK--LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C HL L++ + +H H + F D+ +QN++++ YAKCG A +FD+M K+++
Sbjct: 39 CAHLGDDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLI 98
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++T++I Y+ + A L+ +ML G+ P+ + ++ L A + G +H
Sbjct: 99 SYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL----AVCPTIREGEAIH-- 152
Query: 120 CLKYG-YDWNVYVGS-SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G ++ V S +L+ MY RF ++ A ++F + K+ S+N +IA A+ +G
Sbjct: 153 -VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGS 211
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-L 236
KA+ + EM EP ++Y+SV A + G+L +GK +H V K G Q NT L
Sbjct: 212 KAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKV-KGGDQPTDVAYNTAL 270
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V+MYAK GS +A VFN ++V +W S+++ +Q G + + +++M G+ P+
Sbjct: 271 VNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDD 330
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VTF + ACSH+GL DEG YF M++ H + P + HY +DLLGR G L A + +R
Sbjct: 331 VTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVR 390
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MP P W LL AC+++ ++++GA A +RI EL+P DSGP++L+ N+YA AG+ D
Sbjct: 391 TMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWAD 450
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A +KM+K+ G+ K P S +E + +H FV D AHP I + +E+ E++ GY
Sbjct: 451 VAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGY 510
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
PD+ VL +++ + L HSE++AL L+++ G+T+HI KN+R+C DCHS FK
Sbjct: 511 EPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKL 570
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK++ R+++VRD++RFH F+ G CSCGDYW
Sbjct: 571 VSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 601
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 14/313 (4%)
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF--GRQVHAFCLK 122
+ Y +ND + A+ LF + + L+ NQ T +VLK S A DD G+++H +
Sbjct: 1 MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLK-SCAHLGDDYLEDGKEIHRHAIA 59
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G+ ++ V +SL+ MYA+ A +F +E KN +S+ ++I + ++ +A
Sbjct: 60 QGFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYEL 119
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMY 240
+ +ML EG P ++Y++ ALA ++ +G+ +H +K G + N LV MY
Sbjct: 120 YKKMLSEGIMPDIYAYAA---ALAVCPTIREGEAIH---VKLGNHERRTPVCSNALVGMY 173
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+ G I A+ VF+ + +D+ S+N+M+ A++ G + + +M + PN T+
Sbjct: 174 GRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYT 233
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPI 359
VL ACS G L EG+ +K G +P + Y T V++ + G A + +
Sbjct: 234 SVLDACSKLGALTEGKEIHKKVKG-GDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGL 292
Query: 360 EPTAAVWGALLGA 372
+ W +L+ A
Sbjct: 293 K-NVFTWTSLMSA 304
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 337/562 (59%), Gaps = 6/562 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILN-AYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++E + VHA +L ++N N + A + G +D A +F ++ + +I
Sbjct: 1 MEEFKQVHAQVL--KWENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIR 58
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY ENA+ L+ +ML G++ + FT ++ KA + + ++ G Q+H + K G +
Sbjct: 59 GYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEE-GMQIHGYIFKRGLE 117
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+++V +SL++MY + +++ + +F ++ ++ SW+A+IA HA + L F EM
Sbjct: 118 GDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEM 177
Query: 187 LREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
REG P SV +A G+L+ G+ H ++++ ++ V +L+DMY K G
Sbjct: 178 SREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGC 237
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
IE +F R++K++ +S++ M+TG A HG G ++ F ML G+ P+ V +L VL+A
Sbjct: 238 IEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSA 297
Query: 306 CSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAA 364
C+HAGL+DEG F MK +HG+EP HY V L+GRAG+L++AL+ IR MPI+P
Sbjct: 298 CNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEV 357
Query: 365 VWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMK 424
VW LL AC+ H N+E+G AA+ + EL+ + G +++L+N+YA A R D A+ R M
Sbjct: 358 VWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMA 417
Query: 425 ESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
G + P S V+ + ++ FV+ D +HPQ +++ ++ ++K GY PD+S VL
Sbjct: 418 RKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLF 477
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D++E+ +L+ HS+KLA+AFALI T G+ I I +N+R+C DCH+ K S + +REI
Sbjct: 478 DVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREI 537
Query: 545 IVRDTNRFHHFRDGFCSCGDYW 566
VRD NRFHHF+DG CSC DYW
Sbjct: 538 TVRDRNRFHHFKDGTCSCRDYW 559
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 145/277 (52%), Gaps = 6/277 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ ++E +H +I + D+ +QN+++N Y KCG ++ + +F+ M +D+ +W
Sbjct: 95 CASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASW 154
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
+A+I+ ++ + +F +M R G +P + L SVL A + GA D GR H
Sbjct: 155 SAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALD--LGRCTHVT 212
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
L+ + NV V +SL+DMY + ++ LF + KN++S++ +I G A G +A
Sbjct: 213 LLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEA 272
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVD 238
L+ FS+ML EG +P Y V +A G +++G + + ++ G + +V
Sbjct: 273 LQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVH 332
Query: 239 MYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQH 274
+ ++G + A E + + +K + V W +L+ C H
Sbjct: 333 LMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFH 369
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTHL L R H +L + + ++ +Q ++++ Y KCGC+++ LF M K+ +++
Sbjct: 197 CTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSY 256
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I+G + + + A+ +FS ML GLKP+ VL A D+ + + L
Sbjct: 257 SVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKL 316
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
++G + + ++ + R ++ A ++ K NEV W L++ H GE
Sbjct: 317 EHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGE 376
Query: 178 KALRTFSEM 186
A ++ E+
Sbjct: 377 IAAKSLGEL 385
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 334/568 (58%), Gaps = 13/568 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + R +H ++L + F D ++ N+++ Y+ G ++EA +F +D+V+W
Sbjct: 318 CELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSW 377
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+ISGY P+ A+ + M G+ P++ T++ VL A D G +H
Sbjct: 378 TAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLD-MGMNLHEVAK 436
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G V +SL+DMYA+ +D A +F + KN VSW ++I G + +AL
Sbjct: 437 QKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALF 496
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM+R +P + V +A A G+L GK +HAH +++G F+ N ++DMY
Sbjct: 497 FFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYV 555
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
+ G +E A K F + +V SWN +LTG A+ G G F++M+ + ++PN+VTF+
Sbjct: 556 RCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFIS 614
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L ACS +G++ EG YF MK K+ + P HY VDLLGR+G L+ A +FI++MP++
Sbjct: 615 ILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMK 674
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P AVWGALL +CR+H +VELG AAE IF+ D G +ILL+N+YA G+ + A R
Sbjct: 675 PDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVR 734
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYV-PDS 479
KMM+++G+ +P CSWVE K VH F+++D+ HPQ I+ +K+K+ G P+S
Sbjct: 735 KMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPES 794
Query: 480 SHVLSYADQQEREAKLQV---HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFA 536
SH+ D E +K + HSE+LA+ F LI++ PG I + KN+ +C CH+ KF
Sbjct: 795 SHM----DIME-ASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFI 849
Query: 537 SKVVEREIIVRDTNRFHHFRDGFCSCGD 564
S+ V REI VRD +FHHF+ G CSC D
Sbjct: 850 SREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 215/413 (52%), Gaps = 7/413 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + KE V++++ S + + N +L+ + + G L +A +F M +++ +W
Sbjct: 116 CEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSW 175
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L+ GY++ + A+ L+ +ML +G+KP+ +T VL+ G G + GR++H +
Sbjct: 176 NVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCG-GMPNLVRGREIHVHVI 234
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+YG++ +V V ++L+ MY + ++ A +F + +++ +SWNA+I+G+ + LR
Sbjct: 235 RYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLR 294
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M++ +P + +SV TA G G+ +H +V+++ + N+L+ MY+
Sbjct: 295 LFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYS 354
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
G IE+AE VF+R RD+VSW +M++G + + + ++ M GI P+++T
Sbjct: 355 SVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAI 414
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
VL+ACS LD G + K+ G+ + +D+ + +D+AL+ I +E
Sbjct: 415 VLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALE-IFHSTLEK 473
Query: 362 TAAVWGALLGACRM-HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
W +++ R+ ++ E + E I L P+ + L + ++ R+
Sbjct: 474 NIVSWTSIILGLRINNRCFEALFFFREMIRRLKPNS----VTLVCVLSACARI 522
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/579 (39%), Positives = 337/579 (58%), Gaps = 44/579 (7%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ ++ YAK L+ AR+ FD MP + +V+W A++SGY+QN E + LF +
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDE 250
Query: 84 MLRLGLKPNQFTLSSVLKAS---GAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
M+ G++P++ T +V+ A G R +H ++ N +V ++LLDMYA
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL----NCFVRTALLDMYA 306
Query: 141 R----------FDQ----------------------MDDAWFLFTALESKNEVSWNALIA 168
+ FD+ +D A LF + +N V+WN++IA
Sbjct: 307 KCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIA 366
Query: 169 GHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
G+A+ + A+ F EM+ + P + SV +A G+LE G WV + ++ +
Sbjct: 367 GYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIK 426
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
L N ++ MY++ GS+EDA++VF + RDVVS+N++++G A HG G + M
Sbjct: 427 LSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTM 486
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
GI P++VTF+ VLTACSHAGLL+EG+ F +K +P HY VDLLGR G L
Sbjct: 487 KEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK----DPAIDHYACMVDLLGRVGEL 542
Query: 348 DRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIY 407
+ A + + MP+EP A V+G+LL A R+HK VELG AA ++FEL+P +SG ILL+NIY
Sbjct: 543 EDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIY 602
Query: 408 ASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREIS 467
ASAGR D R R+ MK+ GVKK SWVE +H F+ D +H + I++ E+
Sbjct: 603 ASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELR 662
Query: 468 EKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCG 527
+K+++ GY+ D S VL +++E+E + HSEKLA+ +AL+ + G+ I + KN+RVC
Sbjct: 663 KKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCW 722
Query: 528 DCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
DCH+A K SK+ R IIVRD NRFH F DG CSC DYW
Sbjct: 723 DCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 173/406 (42%), Gaps = 103/406 (25%)
Query: 49 LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
LF+ ++ +T+++ YS +++F M G++P+ F ++K++G G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG-- 113
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQMDD----------- 147
G HA LK G+ + +V ++++DMYAR FD++ D
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 148 ------------AWFLFTALESKN-------------------------------EVSWN 164
A +LF + +N VSWN
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 165 ALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
A+++G+A+ E+ LR F EM+ G EP ++ +V +A +S G + + +
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289
Query: 225 GGQLVAFVGNTLVDMYAKSGSI--------------------------------EDAEKV 252
QL FV L+DMYAK GSI + A ++
Sbjct: 290 QIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAREL 349
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGL 311
FN + R+VV+WNSM+ G AQ+G + F++M+ + P++VT + V++AC H G
Sbjct: 350 FNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGA 409
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
L+ G + ++ ++ + + + + R G ++ A + +EM
Sbjct: 410 LELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 25/294 (8%)
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF + + N + +++ ++ + K + F M G P F Y + A G
Sbjct: 55 LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYP-ILIKSAGNG 113
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSM 267
G HAHV+K G AFV N ++DMYA+ G I A KVF+ + +R V WN+M
Sbjct: 114 ----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 268 LTGCAQ-HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++G + G+A +W ++ N +T+ ++T + L+ + YF M +
Sbjct: 170 VSGYWKWESEGQA--QWLFDVMPE---RNVITWTAMVTGYAKVKDLEAARRYFDCMPERS 224
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGA 383
V A + + GL + L+ EM IEP W ++ AC + L A
Sbjct: 225 VVSWNAMLSGY----AQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAA 280
Query: 384 YAAERIFELDPH-DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
+ + + L ++YA G + AR++ E G + + +W
Sbjct: 281 SLVRTLHQKQIQLNCFVRTALLDMYAKCGSI---GAARRIFDELGAYRN-SVTW 330
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L+ V + + K I+ N ++ Y++CG +++A+++F EM +D+V++
Sbjct: 404 CGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSY 463
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
LISG++ + AI L S M G++P++ T VL A S AG ++ GR+V
Sbjct: 464 NTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEE--GRKVFESI 521
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDA 148
D + ++D+ R +++DA
Sbjct: 522 KDPAIDHY----ACMVDLLGRVGELEDA 545
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/601 (35%), Positives = 341/601 (56%), Gaps = 36/601 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + +H ++ F D+ ++ ++N Y +C L++A ++F EMP + + W
Sbjct: 533 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLW 592
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
I Q+++ + + LF +M LK T+ VL+AS + G++ H + L
Sbjct: 593 NEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVL 652
Query: 122 KYGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWF 150
+ G+D +VYVG+SL+DMY + FD M +DA
Sbjct: 653 RNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALR 712
Query: 151 LFTALESK----NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
L +E + + V+WN +I+G+A G++AL F++M +EG P S + + A A
Sbjct: 713 LLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACA 772
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
S L++GK +H I++G FV L+DMY+KS S+++A KVF R+ + + SWN
Sbjct: 773 SLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNC 832
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKH 325
M+ G A GLGK + F +M + G+ P+ +TF +L+AC ++GL+ EG YF +++ +
Sbjct: 833 MIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDY 892
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+ P HY VDLLGRAG LD A I MP++P A +WGALLG+CR+HKN++ A
Sbjct: 893 RIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETA 952
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A+ +F+L+P++S +IL+ N+Y+ R D R++M +GV+ SW++ VH+
Sbjct: 953 AKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHV 1012
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F +++ HP I+ + ++ ++K++GYVPD + V D+ E++ L H+EKLA+
Sbjct: 1013 FSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAIT 1072
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ LI G I + KN R+C DCHSA K+ S V RE+ +RD RFHHFR+G CSC D+
Sbjct: 1073 YGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDF 1132
Query: 566 W 566
W
Sbjct: 1133 W 1133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 5/231 (2%)
Query: 114 RQVHAFCLKYGYDWNVYVGS-SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+ +HA +K WN + +L+ Y F A +F +N + WN+ + +
Sbjct: 440 KMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVE-EFK 498
Query: 173 KSEGEK--ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
S G L F E+ +G YS + G +H +IK G L
Sbjct: 499 SSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV 558
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
++ L++ Y + +E A +VF+ + + + WN + Q + V F KM +
Sbjct: 559 YLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS 618
Query: 291 GIAPNQVTFLCVLTA-CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDL 340
+ T + VL A S G L+ G+ + ++G + + + +D+
Sbjct: 619 FLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 669
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 327/525 (62%), Gaps = 2/525 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT +++ +H+ + + F++D+ + +++ Y+K G L++AR++ + + KD+V+W
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I+GY Q++ ++A+ F +M + G+ P+ L+S + AG + G Q+HA
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC-AGINAMRQGLQIHARIY 473
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
GY +V + ++L+++YAR ++ +A+ F +E K+ ++ N L++G A+ E+AL+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALK 533
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M + G + F++ S +A A+ ++QGK +HA VIK+G VGN L+ +Y
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K GS EDA+ F+ + +R+ VSWN+++T C+QHG G + F++M + GI PN VTF+
Sbjct: 594 KCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIG 653
Query: 302 VLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL ACSH GL++EG YF M ++G+ P HY +D+ GRAG LDRA KFI EMPI
Sbjct: 654 VLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIA 713
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A VW LL AC++HKN+E+G +AA+ + EL+PHDS ++LL+N YA + + + R
Sbjct: 714 ADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVR 773
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
KMM++ GV+KEP SW+E KN VH F D HP I+ I++++ ++GY +
Sbjct: 774 KMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKY 833
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRV 525
H+ +Q+ R+ VHSEKLA+ F L+S PP + + KN+RV
Sbjct: 834 HLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 192/364 (52%), Gaps = 2/364 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + + N +++ Y+K G + AR++F+E+ +D V+W A++SGY+QN
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
E A+ L+ QM R G+ P + LSSVL +S A GR +HA K+G+ ++VG+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVL-SSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+++ +Y R A +F + ++ V++N LI+GHA+ GE AL F EM G P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ A AS G L++G +H+++ K+G + +L+D+Y K G +E A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N + +VV WN ML Q + F +M GI PNQ T+ C+L C+ +D
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
G+ +L K G E + +D+ + G L++A + + EM E W +++
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGY 421
Query: 374 RMHK 377
H+
Sbjct: 422 VQHE 425
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 185/359 (51%), Gaps = 1/359 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + + R++HA F ++I + N ++ Y +CG A ++F +MP +D VT+
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISG++Q E+A+ +F +M GL P+ T+SS+L A+ A D + G Q+H++
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL-AACASLGDLQKGTQLHSYLF 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + + SLLD+Y + ++ A +F + + N V WN ++ + ++ K+
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M G P F+Y + T ++ G+ +H+ +K+G + +V L+DMY+
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E A +V L ++DVVSW SM+ G QH K + F++M + GI P+ +
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLAS 451
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ C+ + +G A + G + + + V+L R G + A EM ++
Sbjct: 452 AISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELK 510
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 45/404 (11%)
Query: 65 ISGYSQNDQPENAIILFSQMLRL--GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++G+ ++ P + LF+ R GL P F + L+A + ++HA +
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGLGPLDF--ACALRACRGNGRRWQVVPEIHAKAVT 70
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G VG+ L+D+Y++ + A +F L +++ VSW A+++G+A+ GE+AL
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAK 242
+ +M R G PT + SSV ++ QG+ +HA K G FVGN ++ +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
GS AE+VF + RD V++N++++G AQ G G+ + FE+M +G++P+ VT +
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF--------- 353
L AC+ G L +G + + K G+ + + +DL + G ++ AL
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310
Query: 354 -------------------------IREMPIEPTAAVWGALLGACRMHKNVELG----AY 384
++ I P + +L C + ++LG +
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+ + FE D + SG +L ++Y+ G L A R +M+KE V
Sbjct: 371 SVKTGFESDMYVSG---VLIDMYSKYGWLEKARRVLEMLKEKDV 411
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 336/575 (58%), Gaps = 19/575 (3%)
Query: 2 CTHLKKLKEARI--VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+ L+ +++ HA + + +D+ + ++NAYA+CG +D ARK F EMP ++ V
Sbjct: 240 CSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAV 299
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WT++I+ ++Q A+ F ML G+ P + TL + L+ G D + R V A
Sbjct: 300 SWTSMIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALE----GCEDLRVARLVEAI 354
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA-----LIAGHARKS 174
+ G +V + + L+ YAR D +DA +F+A + E W+A +IA +A+
Sbjct: 355 AQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDAALVTAMIAVYAQCR 411
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV-- 232
+ + + + G P Y + A AS +L +G+ +HA + + +L V
Sbjct: 412 DRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHA-CVAADRRLDRDVTL 470
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
GN +V MY + GS+ DA F+ + RD +SWN+ML+ AQHG + F ML+ G
Sbjct: 471 GNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGF 530
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
++ FL +L+AC+HAGL+ G +F+ M HGV P HY VDLLGR G L A
Sbjct: 531 DAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAH 590
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
++ MP+ P AA W AL+GACR++ + E G +AAER+ EL + ++ L NIY++AG
Sbjct: 591 GIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAG 650
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
R +DAA RK+M + G++K P S +E ++ VH FV D +HPQ I+ + + I+
Sbjct: 651 RWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIE 710
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
+ GY + VL +++++E L+ HSEKLA+AF ++STP GST+ + KN+RVC DCH+
Sbjct: 711 RAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHN 770
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A KF SKV REI+VRD RFHHF+DG CSCGDYW
Sbjct: 771 ASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ ++++ Y +CG L+ A +F ++ K +V WT LIS Y AI LF ++L+ G
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 89 LKPNQFTLSSVLKASGAGATDDKF---GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+ + SVL A + ++F GR +H ++ G V S+L+ MY R +
Sbjct: 124 IALDAIVFVSVLSA----CSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179
Query: 146 DDAWFLFTALESKNEVS-WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
DA LF LE +V WNA+I +++ +AL F ML+ G P ++ SVF A
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239
Query: 205 LASTGSLE--QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+S+ SL Q K HA + ++G V LV+ YA+ G I+ A K F + +R+ V
Sbjct: 240 CSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAV 299
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
SW SM+ Q G A V F ML G+ P + T L C
Sbjct: 300 SWTSMIAAFTQIGHLLA-VETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 181/389 (46%), Gaps = 20/389 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C+ + L R++H + + + + +++ Y +CG L +A LF + D+V
Sbjct: 138 CSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVL 197
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF- 119
W A+I+ SQN P A+ +F +ML+LG+ P+ T SV KA ++ QV F
Sbjct: 198 WNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA--CSSSPSLRASQVKGFH 255
Query: 120 -CL-KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
CL + G +V V ++L++ YAR ++D A F + +N VSW ++IA +
Sbjct: 256 ACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGH-L 314
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A+ TF ML EG PT S++F AL L + V A + G + LV
Sbjct: 315 LAVETFHAMLLEGVVPTR---STLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLV 371
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWN-----SMLTGCAQHGLGKATVRWFEKMLRNGI 292
YA+ EDA +VF+ R+ W+ +M+ AQ ++T + + + GI
Sbjct: 372 MAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428
Query: 293 APNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+P+++ ++ L AC+ L EG Q + + ++ + V + G+ G L A
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVE 380
MP + W A+L A H VE
Sbjct: 489 DAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 4/246 (1%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
Y+ SSL+ MY R ++ A +F + K+ V W LI+ + + A+ F +L+E
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G + SV +A +S L G+ +H +++G L V + LV MY + GS+ DA
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 250 EKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
+F L + DVV WN+M+T +Q+G + + F +ML+ GI P+ VTF+ V ACS
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 309 AGLLDEGQ--GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L Q G+ A + + G+ + V+ R G +D A KF EMP E A W
Sbjct: 243 SPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMP-ERNAVSW 301
Query: 367 GALLGA 372
+++ A
Sbjct: 302 TSMIAA 307
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 325/566 (57%), Gaps = 37/566 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT + R VH I+ S F ++ +Q+ +++ YAKCG L AR + D M + D+V W
Sbjct: 246 CTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCW 305
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G + E A++LF +M ++ + FT SVLK S A + K G VH+ +
Sbjct: 306 NSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLK-SLASCKNLKIGESVHSLTI 364
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+D V ++L+DMYA+ + A +F + K+ +SW +L+ G+ EKAL+
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQ 424
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M + F + VF+A A +E G+ VHA+ IKS + N+L+ MYA
Sbjct: 425 LFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYA 484
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +EDA +V + + R+V+SW +++ G AQ+GL
Sbjct: 485 KCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGL------------------------- 519
Query: 302 VLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ GQ YF M+K +G++P Y +DLLGRAG ++ A + M +E
Sbjct: 520 ----------VETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVE 569
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A +W +LL ACR+H N+ELG A + + +L+P +S P++LL+N+++ AGR DAA R
Sbjct: 570 PDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIR 629
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ MK G+ +EP SW+E K+ VH F++ D +HP A I+ K E+ IK+ G+VPD +
Sbjct: 630 RAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMN 689
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L D++ +E L HSEKLA+AF L++ G+ I I KN+RVCGDCHSA K+ S +
Sbjct: 690 FALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIF 749
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
+R II+RD N FHHF +G CSCGD+W
Sbjct: 750 KRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 186/341 (54%), Gaps = 3/341 (0%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N +++AYA G L EARKLF+E P+ + +TW++L+SGY +N + FSQM G K
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQK 131
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+Q+TL SVL+A + G+ +H + +K + N++V + L+DMY++ + +A +
Sbjct: 132 PSQYTLGSVLRACSTLSLLHT-GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190
Query: 151 LFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
LF +L + KN V W A++ G+A+ E KA++ F EM +G E HF++ S+ TA S
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSIS 250
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
+ G+ VH +I SG +V + LVDMYAK G + A + + + DVV WNSM+
Sbjct: 251 AYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIV 310
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
GC HG + + F KM I + T+ VL + + L G+ +L K G +
Sbjct: 311 GCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA 370
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ VD+ + G L AL ++ ++ W +L+
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKI-LDKDVISWTSLV 410
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
Y WN+ + + YA + +A LF N ++W++L++G+ + + LR FS
Sbjct: 69 YTWNIMISA-----YANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFS 123
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+M +G +P+ ++ SV A ++ L GK +H + IK + FV LVDMY+K
Sbjct: 124 QMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCK 183
Query: 245 SIEDAEKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
+ +AE +F L R + V W +MLTG AQ+G ++ F++M G+ N TF +L
Sbjct: 184 CLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSIL 243
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
TAC+ G+ + G P VD+ + G L A + M I+
Sbjct: 244 TACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVV 303
Query: 364 AVWGALLGACRMHKNVE 380
W +++ C H +E
Sbjct: 304 C-WNSMIVGCVTHGYME 319
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 31/168 (18%)
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN---------------------------- 265
N L+ +K+G +++A K+F+++ RD +WN
Sbjct: 41 NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSI 100
Query: 266 ---SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
S+++G ++G +R F +M +G P+Q T VL ACS LL G+
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
K +E VD+ + L A +P W A+L
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAML 208
>gi|357139595|ref|XP_003571366.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Brachypodium distachyon]
Length = 674
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/567 (36%), Positives = 332/567 (58%), Gaps = 9/567 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L++ A V H+ S F+ D M N +L Y CG L EAR++F+ MP + VTW +
Sbjct: 112 LREAGSAAAVLWHMESSGFQPDQYMWNRVLGMYLACGMLAEAREVFEGMPARSRVTWGVM 171
Query: 65 ISGYSQNDQPENAIILFSQM---LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ G QP A+ LF ++ + +G P ++ V A+ G+ + G+++H
Sbjct: 172 MGGLVDGRQPRGALALFGELWGEMGVGAGPRVLVVA-VRAATALGSV--RAGQELHCCVA 228
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + Y+ +L+DMY++ ++D+A +F + ++ V+WN ++A ++ E+A+
Sbjct: 229 KMGACEDQYLPCALVDMYSKCGRLDEARRVFDGMPWRSVVAWNTMLAAYSLHGCAEEAVD 288
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
+ +M G F++S++ + G LE K +HA +I+SG + VGNT LVD+Y
Sbjct: 289 LYHDMCECGVVFDQFTFSTMLGVFSRLGLLEHAKQIHASLIQSGLHM-DIVGNTALVDLY 347
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +EDA VF R+ R+++SWN+++ G HG+G + FE+++ GIAPN VT+L
Sbjct: 348 CKWGRMEDARHVFERMPSRNLISWNALIAGYGYHGMGAHAIEMFERLIAEGIAPNHVTYL 407
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL AC +G +D+G+ F LM ++ +P HY ++L G+ GLLD A IR+ P
Sbjct: 408 GVLNACRFSGFIDKGKRIFQLMAQNPKTKPRAMHYACVIELFGQQGLLDEAYSMIRKAPF 467
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
PTA +WGALL ACR+HKN++L AAE++ ++P +I+L N+Y S+GR ++A +
Sbjct: 468 TPTANMWGALLTACRIHKNIQLARLAAEQLLAMEPQKVNNYIVLLNLYISSGRQDEALKV 527
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
+ +G+ ACSW+ K H F D HP+ + I++K + E +K++GYV +
Sbjct: 528 VNTLNGAGLCMSNACSWITVKKKDHRFFFKDSLHPKSSEIYRKLHTLMEALKELGYVAEE 587
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+L E + HSE+LA+AF +IST P + + I ++ R+C DCH K ++V
Sbjct: 588 DELLPDILPDELKTSKAYHSERLAVAFGIISTSPSTPLTINQSHRLCRDCHKVMKLVAQV 647
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
+REI++RD +RFHHF+ G CSCGDYW
Sbjct: 648 TKREIVLRDGSRFHHFKLGTCSCGDYW 674
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 147/277 (53%), Gaps = 9/277 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L ++ + +H + D + +++ Y+KCG LDEAR++FD MP + +V W
Sbjct: 212 TALGSVRAGQELHCCVAKMGACEDQYLPCALVDMYSKCGRLDEARRVFDGMPWRSVVAWN 271
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCL 121
+++ YS + E A+ L+ M G+ +QFT S++L S G + +Q+HA +
Sbjct: 272 TMLAAYSLHGCAEEAVDLYHDMCECGVVFDQFTFSTMLGVFSRLGLLEH--AKQIHASLI 329
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G ++ ++L+D+Y ++ +M+DA +F + S+N +SWNALIAG+ G A+
Sbjct: 330 QSGLHMDIVGNTALVDLYCKWGRMEDARHVFERMPSRNLISWNALIAGYGYHGMGAHAIE 389
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVH---AHVIKSGGQLVAFVGNTLVD 238
F ++ EG P H +Y V A +G +++GK + A K+ + + + +++
Sbjct: 390 MFERLIAEGIAPNHVTYLGVLNACRFSGFIDKGKRIFQLMAQNPKTKPRAMHYA--CVIE 447
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVS-WNSMLTGCAQH 274
++ + G +++A + + + W ++LT C H
Sbjct: 448 LFGQQGLLDEAYSMIRKAPFTPTANMWGALLTACRIH 484
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 19/277 (6%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T+ + + +AL GS W H+ SG Q ++ N ++ MY G + +A +VF
Sbjct: 101 TYDALVTAASALREAGSAAAVLW---HMESSGFQPDQYMWNRVLGMYLACGMLAEAREVF 157
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLL 312
+ R V+W M+ G + + F ++ G+ + + A + G +
Sbjct: 158 EGMPARSRVTWGVMMGGLVDGRQPRGALALFGELWGEMGVGAGPRVLVVAVRAATALGSV 217
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
GQ + K G ++ VD+ + G LD A + MP A W +L A
Sbjct: 218 RAGQELHCCVAKMGACEDQYLPCALVDMYSKCGRLDEARRVFDGMPWRSVVA-WNTMLAA 276
Query: 373 CRMHKNVELGAYAAERIFELD-PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+H E + E D + +++ G L A + + +SG+ +
Sbjct: 277 YSLHGCAEEAVDLYHDMCECGVVFDQFTFSTMLGVFSRLGLLEHAKQIHASLIQSGLHMD 336
Query: 432 PA---------CSWVETKNAVHMFVANDDAHPQRAMI 459
C W ++A H+F + P R +I
Sbjct: 337 IVGNTALVDLYCKWGRMEDARHVF----ERMPSRNLI 369
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 342/568 (60%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L+E R++H + F + N ++N Y KCG L+EA ++F M +D+++W
Sbjct: 313 CSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISW 372
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+ + Q+ Q A+ L M G+K ++ + + L A K GR +H++ +
Sbjct: 373 NTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAK-GRMIHSWIV 431
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKAL 180
+ G +V + +++LDMY DDA +F A++++++VSWNA+I +A + +AL
Sbjct: 432 ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEAL 491
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M GF P S+ + +A A+ SL +GK +H + ++G + V N +++MY
Sbjct: 492 LLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMY 551
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSGS+ A K+F ++ DV+SWN M++ AQHG +R+F +M G PN VTF+
Sbjct: 552 AKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFV 611
Query: 301 CVLTACSHAGLLDEG-QGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
V++ACSH GL+ +G Q + +L+ + P HY VDL+ RAG LD A KFI P
Sbjct: 612 SVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAP 671
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P + +LGA ++HK+VE +AE + EL P S +++L+N+Y G+ ++ A+
Sbjct: 672 LKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAK 731
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R++M E ++KEPA S + K VH F D + + I ++ +S ++ + GY PD
Sbjct: 732 IRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPD 791
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
++ +L ++++ L HSEKLA+AF LIST PG+++ I KN+RVCGDCH+A KF SK
Sbjct: 792 TTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISK 851
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ REI+VRD++RFHHF +G CSCGDYW
Sbjct: 852 ITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 16/379 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + VHA I SA M + ++ Y CG L +A+ FD MPV+D +TW LI
Sbjct: 12 RSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLI 71
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ Q E A+ LF M G+ P +VL A A + GR++H
Sbjct: 72 RAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAM 131
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + YV ++LL MY + ++DA +F + K V WNA+I +A++ E+A++ F
Sbjct: 132 ESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYA 191
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWV--------HAHVIKSGGQLVAFVGNTLV 237
ML EG + ++ V A + LE K V H H+ S LV
Sbjct: 192 MLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS------FATALV 245
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+ Y G +E A + F+R + +++ +M+T Q + F+ ML G+ +++
Sbjct: 246 NFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRI 304
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ VL ACS L+EG+ M++ + +++ G+ G L+ A++ R M
Sbjct: 305 ACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM 364
Query: 358 PIEPTAAVWGALLGACRMH 376
+ W ++ A H
Sbjct: 365 QHRDVIS-WNTIIAAHGQH 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 42/262 (16%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+ + +A + SL+ GK VHA + KS F+G+ LV MY GS+ DA+ F+R+
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS-HAGLLDEGQ 316
+D ++W ++ Q G + + F M G+AP F+ VL ACS LL+EG+
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 317 GYFALMKKHGVEPEEAHYV--TFVDLLGRAGLL--------------------------- 347
+++ G E HYV T + + G+ +
Sbjct: 121 RIHGVLR--GTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178
Query: 348 ----DRALKFIREMPIEPTAA---VWGALLGACRMHKNVELGAYAAERIFELDP---HDS 397
++A++ M +E A + +L AC K++E+ + E + HDS
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDS 238
Query: 398 GPHILLANIYASAGRLNDAARA 419
L N Y S G L A RA
Sbjct: 239 SFATALVNFYGSCGDLEQAFRA 260
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/627 (37%), Positives = 338/627 (53%), Gaps = 68/627 (10%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L + VHA ++ +A + D+ N ++ Y KCG L AR++FD MP ++ V+ L+S
Sbjct: 31 ELSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 67 GYSQNDQPENAI-------------ILFSQM-------------------LRLGLKPNQF 94
GY+ + + +A+ +L S + ++ GL + +
Sbjct: 90 GYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPY 149
Query: 95 TLSSVL-----------------------KASG-----------AGATDDKFGRQVHAFC 120
S+VL +A G A + G QVH
Sbjct: 150 VCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQA 209
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
LK + NVYVGS+L+DMY + D +A +F L KN VSW A++ + + E AL
Sbjct: 210 LKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDAL 269
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F +M EG P F+Y+ + A +L+ G + A +K+G + V N L++MY
Sbjct: 270 QLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMY 329
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+KSGS+EDA +VF + RDVVSWNS++ G A HG + + F ML P+ VTF+
Sbjct: 330 SKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFI 389
Query: 301 CVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL+AC+ GL+DEG Y +MK+ GV+P + HY V LL R G LD A +FI I
Sbjct: 390 GVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCI 449
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
W +LL +C++++N LG AE+IF+L P D G ++LL+N+YA A R + +
Sbjct: 450 GTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKV 509
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R++M+E GV+KEP SW++ + VH+F + D HP I KK +E+ +KIK IGYVP+
Sbjct: 510 RRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNI 569
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
+ L + +++E L HSEKLALAF LI TP G I I KN+R+C DCH A K S
Sbjct: 570 AVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLA 629
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R I+VRDT RFH DG CSC DYW
Sbjct: 630 TGRRIVVRDTVRFHCIEDGVCSCDDYW 656
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 156/281 (55%), Gaps = 6/281 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K++ VH L + ++ + + +++ Y KC EA ++F+ +P K++V+W
Sbjct: 193 CASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSW 252
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++ Y+QN+ E+A+ LF M G++PN+FT + L S AG K G + A +
Sbjct: 253 TAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALN-SCAGLATLKNGNALGACTM 311
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ + V ++L++MY++ ++DA +F ++ ++ VSWN++I G+A +A+
Sbjct: 312 KTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAME 371
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +ML P++ ++ V +A A G +++G + ++K G T +V +
Sbjct: 372 AFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLL 431
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCA---QHGLG 277
+ G +++AE+ + + + DVV+W S+L+ C +GLG
Sbjct: 432 CRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 472
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 18/242 (7%)
Query: 209 GSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G L GK VHA V+++ +V + N L+ +Y K G + A +VF+ + R+ VS N +
Sbjct: 30 GELSLGKAVHARVVRAARFDVVQY--NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLL 87
Query: 268 LTGCAQHGLGKATVRWFEKMLRNG-IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++G A G + + +LR N+ + A +H D G+ K G
Sbjct: 88 MSGYASSGRHRDAL----ALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAG 143
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA---AVWGALLGACRMHKNVELGA 383
+ + + + +D A+K+ ++ + A V +LG C K V LG+
Sbjct: 144 LAEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGS 203
Query: 384 ----YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
A +R EL+ + L ++Y ++A R +++ E + A T
Sbjct: 204 QVHTQALKRRLELNVYVGSA---LVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYT 260
Query: 440 KN 441
+N
Sbjct: 261 QN 262
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 322/558 (57%), Gaps = 34/558 (6%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+VH ++ + F +D+ ++ +++ YAKCG + +A ++FD M ++D+V WTA+I+ Y Q
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQ 210
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
++P A++LF +M G ++ T SV AS G D GR
Sbjct: 211 AERPLKALMLFRKMQEEGFLGDEITAISV--ASAVGQLGD--GRMA-------------- 252
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
+ A +F +E +N +SWN++++G+ + AL F++M
Sbjct: 253 --------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASE 298
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
+P + + +A + GS G+ +H VI S + + N ++DMY K G ++ A
Sbjct: 299 CDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAV 358
Query: 251 KVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
++FN L +RDV SWN +++G HG GK + F +M G+ PN +TF +L+ACSH
Sbjct: 359 EMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 418
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
AGL+DEG+ FA M K V PE HY VD+LGRAG L+ A + I+++P P+ VWGA
Sbjct: 419 AGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 478
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL ACR+H N ELG AA +F+L+P +G ++L++NIYA++ + + R+ MK G+
Sbjct: 479 LLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGL 538
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
KK A S +E VH F D + P +++K ++ ++K +GYVPD S VL +
Sbjct: 539 KKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEP 598
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
+++E L HSEKLA+AF ++ G I + KN+RVC DCH AFKF S + R+IIVRD
Sbjct: 599 EDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRD 658
Query: 549 TNRFHHFRDGFCSCGDYW 566
NRFHHF+ G CSCGDYW
Sbjct: 659 GNRFHHFQGGRCSCGDYW 676
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 198/447 (44%), Gaps = 58/447 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFK-NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
CT L LK ++H+ + F + ++ Y+K G L AR LFD
Sbjct: 35 CTSLTTLK---LIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGH 91
Query: 61 WTA--------LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK--ASGAGATDD 110
A ++ Y+ + AI L+ M R+G+ N FT VLK AS GA
Sbjct: 92 TQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAV-- 149
Query: 111 KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGH 170
FG VH ++ G+ +++V ++L+DMYA+ ++ DA +F + ++ V W A+I +
Sbjct: 150 -FGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
+ KAL F +M EGF + SV +A+ G L G+
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAV---GQLGDGRM-------------- 251
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
+I A VF+R+ +R+ +SWNSML+G Q+G + F +M +
Sbjct: 252 --------------AISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 297
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
PN VT L +++ACS+ G G+ + ++ + +D+ + G LD A
Sbjct: 298 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTA 357
Query: 351 LKFIREMPI-EPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIY 407
++ + E + W L+ +H + + L ++ ++ ++P+D I +I
Sbjct: 358 VEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPND----ITFTSIL 413
Query: 408 AS---AGRLNDAARARKMMKESGVKKE 431
++ AG +++ + M + V+ E
Sbjct: 414 SACSHAGLIDEGRKCFADMTKLSVRPE 440
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD--EMPVKDMV 59
C++L R +H ++ S D ++N I++ Y KCG LD A ++F+ E+ +D+
Sbjct: 313 CSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVS 372
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHA 118
+W LISGY + + A+ LFS+M G++PN T +S+L A S AG D+ GR+ A
Sbjct: 373 SWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE--GRKCFA 430
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKS 174
K + + ++DM R +++A+ L + S+ ++ W AL+ H
Sbjct: 431 DMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 490
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
GE A ++ EP H Y + + + + + KW +++
Sbjct: 491 LGEIAANNLFQL-----EPEHTGYYVLMSNIYAASN----KWKEVEMVR 530
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/555 (40%), Positives = 325/555 (58%), Gaps = 11/555 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTI----LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
+ A ++ S + + N I + A A + +A +F + ++ A + +
Sbjct: 7 IQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALA 66
Query: 70 QNDQPENAIILFSQMLRLGLKPN--QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
QN +AI F+ + PN +FT +SVLKA AG G+++HA K G++
Sbjct: 67 QNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKAC-AGLAHVVNGQKIHAMVTKQGFES 125
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSE 185
N++V +SL+DMY + + A LF + +N V WNA+IAG+A+ + A+ F
Sbjct: 126 NLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRM 185
Query: 186 MLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
M + G P + SV A A G+L+ GKW+ + + L F+GN L DMYAK G
Sbjct: 186 MQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCG 245
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
I +A +VFN++ +RDV+SW+ ++ G A +G F +ML G PN V F+ +LT
Sbjct: 246 CITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLT 305
Query: 305 ACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
AC+HAGL+ +G F M K++GV P+ HY VDLL RAG LD+A I MP++P
Sbjct: 306 ACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNV 365
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+WGALLG CR++++ G + I ELD SG ++ LAN+Y+S GRL+DAA+ R M
Sbjct: 366 IIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRM 425
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+E+GV K P CSW+E N VH F D +HP+ I+ RE+ K+K GY P + V+
Sbjct: 426 RENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVV 485
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
D++E+E L +HSEKLA+AF LIST G+TI + KN+R+C DCH A K S +V+RE
Sbjct: 486 HSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKRE 545
Query: 544 IIVRDTNRFHHFRDG 558
IIVRD +RFHHF+DG
Sbjct: 546 IIVRDRSRFHHFKDG 560
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 152/277 (54%), Gaps = 10/277 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD--MV 59
C L + + +HA + F++++ ++N++++ Y K G L AR LFDEM V+D +V
Sbjct: 102 CAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVV 161
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASG-AGATDDKFGRQVH 117
W A+I+GY+QN++ +AI +F M + G+ PN TL SVL A GA D G+ +
Sbjct: 162 CWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALD--LGKWID 219
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
F + +++G++L DMYA+ + +A +F +E ++ +SW+ +I G A +
Sbjct: 220 GFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHAD 279
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNT 235
+A F EML G +P + + TA G +++G + K G V G
Sbjct: 280 EAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYG-C 338
Query: 236 LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC 271
+VD+ +++G ++ AE + + + +K +V+ W ++L GC
Sbjct: 339 VVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGC 375
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + + I + + N + + YAKCGC+ EAR++F++M +D+++W
Sbjct: 206 CAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISW 265
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +I G + + A F +ML G KPN +L A K +
Sbjct: 266 SIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDK 325
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEGEKAL 180
+YG V ++D+ +R ++D A + +++ K N + W AL+ G + +
Sbjct: 326 EYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQ 385
Query: 181 RTFSEMLREGFEPTHF-SYSSVFTALASTGSLEQG-----KWVHAHVIKSGGQLVAFVGN 234
R +L + H SY + +S G L+ + V+K+ G V N
Sbjct: 386 RVVQHILE--LDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDN 443
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
T+ + + S ++ K+++ + R+++ W L G
Sbjct: 444 TVHEFFMGDLSHPESNKIYSMI--RELM-WKMKLAG 476
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/602 (36%), Positives = 340/602 (56%), Gaps = 40/602 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + A +H+ I+ + F + NT+L+ Y KCG + +A +LFDEMP +D V+W
Sbjct: 13 CARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSW 72
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKA-SGAGATDDKFGRQVHA- 118
++++ +++ P + + + M GL+P+ F + +++A S G + G+QVHA
Sbjct: 73 ASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYL--RLGKQVHAR 130
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE--- 175
F L D V V SSL+DMY + Q D+A +F ++ KN VSW ++I+G+AR
Sbjct: 131 FMLSXFCDDEV-VKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCE 189
Query: 176 ----------------------------GEKALRTFSEMLREGFEPTH-FSYSSVFTALA 206
G + F+EM REG + SSV A
Sbjct: 190 AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCA 249
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ LE GK +H VI G + F+ N LVDMYAK I A+ +F R+ ++DV+SW S
Sbjct: 250 NLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTS 309
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKH 325
++ G AQHG + + +++M+ + I PN+VTF+ +L ACSHAGL+ G+ F ++ +
Sbjct: 310 IIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDY 369
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
+ P HY +DLL R+G LD A + ++P +P W +LL AC H N+E+G
Sbjct: 370 SINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
A+R+ +L P D +ILL+N+YA A ++ RK+M V+KEP S ++ +
Sbjct: 430 ADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQV 489
Query: 446 FVANDDA-HPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLAL 504
F A + HP + I +++ ++++ GYVP++S VL +QQE+E +L HSE+LA+
Sbjct: 490 FHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAV 549
Query: 505 AFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGD 564
A+ L+ PG+ I I KN+R+CGDCH+ KF S +V+REI+VRD R+HHF++G CSC D
Sbjct: 550 AYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCND 609
Query: 565 YW 566
+W
Sbjct: 610 FW 611
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 334/561 (59%), Gaps = 9/561 (1%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R++HA ++ S D + + +++ Y G +A+KLFDEMP KD ++W +L+SG+S+
Sbjct: 70 CRVIHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSR 129
Query: 71 NDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
N + +F M + + N+ TL SV+ A D+ G +H +K G + V
Sbjct: 130 IGDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDE-GWCLHCCAVKLGMELEV 188
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
V ++ ++MY +F +D A+ LF AL +N VSWN+++A + +A+ F+ M
Sbjct: 189 KVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVN 248
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWV---HAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
G P +++ + L + L G+ V H + G + TL+++Y+K G +
Sbjct: 249 GLFPDE---ATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRL 305
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ KVF + K D V+ +ML G A HG GK + +F+ +R G+ P+ VTF +L+AC
Sbjct: 306 NVSHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSAC 365
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+GL+ +G+ YF +M + V+P+ HY VDLLGR G+L+ A + I+ MP+EP + V
Sbjct: 366 SHSGLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGV 425
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGACR+++N+ LG AAE + L+P D +I+L+NIY++AG +DA++ R +MK
Sbjct: 426 WGALLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKT 485
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
+ CS++E N +H FV +D +HP IH+K EI KIK++G+V ++ +L
Sbjct: 486 KVFIRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHD 545
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
D++ + + HSEK+ALAF L+ + + I KN+R+C DCH+ KF S + +R II
Sbjct: 546 VDEEVKTDMINKHSEKIALAFGLLVSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTII 605
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD+ RFHHF DG CSC DYW
Sbjct: 606 IRDSKRFHHFSDGLCSCADYW 626
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 165/332 (49%), Gaps = 20/332 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K E +H + + ++ + N +N Y K GC+D A KLF +P ++MV+W
Sbjct: 163 CAFAKARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSW 222
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++++ ++QN P A+ F+ M GL P++ T+ S+L+A + +H
Sbjct: 223 NSMLAVWTQNGIPNEAVNYFNMMRVNGLFPDEATILSLLQACEKLPL-GRLVEAIHGVIF 281
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
G + N+ + ++LL++Y++ +++ + +F + ++V+ A++AG+A G++A+
Sbjct: 282 TCGLNENITIATTLLNLYSKLGRLNVSHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIE 341
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW---VHAHVIKSGGQLVAFVGNTLVD 238
F +REG +P H +++ + +A + +G + GK+ + + + QL + + +VD
Sbjct: 342 FFKWTVREGMKPDHVTFTHLLSACSHSGLVMDGKYYFQIMSDFYRVQPQLDHY--SCMVD 399
Query: 239 MYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQH---GLGKATVRWFEKMLRNGIAP 294
+ + G + DA ++ + L+ + W ++L C + LGK N IA
Sbjct: 400 LLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGACRVYRNINLGKEAA-------ENLIAL 452
Query: 295 NQV---TFLCVLTACSHAGLLDEGQGYFALMK 323
N ++ + S AGL + ALMK
Sbjct: 453 NPSDPRNYIMLSNIYSAAGLWSDASKVRALMK 484
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 325/564 (57%), Gaps = 2/564 (0%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
H++ R H + + S + + N +L+ Y +C +++A K+F+ + D+ + +
Sbjct: 120 HVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNS 179
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
+I+G+ + + +I + M+ + + + +VL A + G QVHA LK
Sbjct: 180 MINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVL-GHCASTKELLLGCQVHAQALKR 238
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
+ NVYVGS+L+DMY + D DA F L KN VSW A++ + + E AL+ F
Sbjct: 239 RLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLF 298
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
++ EG P F+Y+ + A +L+ G + A +K+G V N L++MY+KS
Sbjct: 299 LDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKS 358
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
GSI DA +VF + RDVVSWNS++ G A HGL + + F ML I P+ VTF+ VL
Sbjct: 359 GSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVL 418
Query: 304 TACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
AC+ GL+DEG Y +MK+ G++P HY V LL RAG LD A +FI I
Sbjct: 419 LACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTD 478
Query: 363 AAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKM 422
W +LL +C+++KN LG AE+I +L P+D G ++LL+N+YA A R + + RK+
Sbjct: 479 VVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKL 538
Query: 423 MKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHV 482
M+E GV+KEP SW++ + VH+F + D H I K +E+ +IK IGYVP+ + V
Sbjct: 539 MRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVV 598
Query: 483 LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
L + +++E L HSEK+ALAF LI +P G TI I KN+R+C DCH A K S V R
Sbjct: 599 LHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRR 658
Query: 543 EIIVRDTNRFHHFRDGFCSCGDYW 566
+I+VRDT RFH DG CSC DYW
Sbjct: 659 KIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 181/335 (54%), Gaps = 12/335 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K+L VHA L + ++ + + +++ Y KC C +A F+ +P K++V+W
Sbjct: 219 CASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSW 278
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++ Y+QN++ E+A+ LF + G++PN+FT + L S AG K G + A +
Sbjct: 279 TAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALN-SCAGLAALKNGNALSASAM 337
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ + V ++L++MY++ + DAW +F ++ ++ VSWN++I G+A +A+
Sbjct: 338 KTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMC 397
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +ML P++ ++ V A A G +++G + ++K G T +V +
Sbjct: 398 VFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLL 457
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGCA---QHGLGKATVRWFEKMLRNGIAPNQ 296
++G +++AE+ + + + DVV+W S+L+ C +GLG R E++L+ + PN
Sbjct: 458 CRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGH---RVAEQILQ--LKPND 512
Query: 297 V-TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
V T++ + + A D LM++ GV E
Sbjct: 513 VGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKE 547
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 171/352 (48%), Gaps = 5/352 (1%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
+L + +HA ++ +A D+ N ++ Y KCG L AR++FD MP ++ V+ L+S
Sbjct: 26 ELCTGKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMS 84
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY+ + +A+ L N++ LS+ L A+ A GRQ H + +K G
Sbjct: 85 GYASAGRHSDALALLKAA---DFSLNEYVLSTALSAA-AHVRSYGMGRQCHGYAVKSGLQ 140
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ YV +++L MY + ++DA +F + + ++N++I G E + ++R M
Sbjct: 141 EHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSM 200
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+ E + H SY +V AST L G VHA +K + +VG+ LVDMY K
Sbjct: 201 VGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCA 260
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA F L +++VVSW +++T Q+ + ++ F + G+ PN+ T+ L +C
Sbjct: 261 RDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSC 320
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ L G A K G + +++ ++G + A + MP
Sbjct: 321 AGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMP 372
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 5/260 (1%)
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
G+ +HA ++ + ++V + L+ Y + ++ A +F A+ S+N VS N L++G+A
Sbjct: 30 GKAIHAQMIRAAH-FDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
AL F + S+ +A A S G+ H + +KSG Q +V
Sbjct: 89 AGRHSDALALLKA---ADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N ++ MY + +EDA KVF + D+ ++NSM+ G G ++R M+
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ V+++ VL C+ L G A K +E VD+ G+ A
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHS 265
Query: 353 FIREMPIEPTAAVWGALLGA 372
+P E W A++ A
Sbjct: 266 AFEVLP-EKNVVSWTAVMTA 284
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/566 (37%), Positives = 335/566 (59%), Gaps = 3/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIA-MQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C L ++KE R VH ++ A ++ + ++ YA G L + K+F+ + K +++
Sbjct: 312 CARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W LIS +++N QPE A++LF QM GL P+ ++L+S L A G + + G Q+H +
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGT-ISFSQLGAQIHGYI 430
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G ++N +V ++L+DMYA+ + A +F ++ K+ V+WN++I G ++ +A+
Sbjct: 431 IKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAI 489
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M + ++ SV A + G LE+GKWVH +I G + +++ L DMY
Sbjct: 490 TLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMY 549
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
+K G ++ A VF+R+ +R +VSW+ M+ G HG AT+ F +ML +GI PN +TF+
Sbjct: 550 SKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFM 609
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L+ACSHAG ++EG+ YF M + GVEP+ H+ VDLL RAG L+ A + I +P
Sbjct: 610 HILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFP 669
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
+++WGALL CR+HK +++ + + ++D D+G + LL+NIYA G + + R
Sbjct: 670 ANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVR 729
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MMK G++K P S +E ++ F D +H Q I++ + Y +
Sbjct: 730 SMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPD 789
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ + + +E + HSEKLA+AF +I+T PG+T+ I KN+RVC DCHS K ASK+
Sbjct: 790 NSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKIT 849
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REII+RD NRFH FR+G CSC DYW
Sbjct: 850 GREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 196/399 (49%), Gaps = 22/399 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L VH ++ F++D ++ ++L Y + CLD+A K FD MP++D+V W
Sbjct: 110 CSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAW 169
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
++++ + QN Q + +FSQM+ ++P+ T+ SV +A S G+ + GR VH +
Sbjct: 170 SSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSL--RLGRSVHGYV 227
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ + N + +SL+ MY + + A LF + + W +I+ + + ++AL
Sbjct: 228 VRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEAL 287
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDM 239
F++M EP + V A A G +++G+ VH VI+ + F+G L+++
Sbjct: 288 NVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMEL 347
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA +G++ D KVF + ++ ++SWN++++ ++G + + F +M G+ P+ +
Sbjct: 348 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 407
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV-----DLLGRAGLLDRALKFI 354
L+AC G + HG + ++ FV D+ + G + A K
Sbjct: 408 ASSLSACGTISFSQLGA------QIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMF 461
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
++ E + W +++ C +N Y+ E I D
Sbjct: 462 EKIK-EKSLVTWNSMI--CGFSQN----GYSVEAITLFD 493
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 9/332 (2%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HAH+ + ++ +YA+ G + ++++FD P D W LI Y
Sbjct: 20 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79
Query: 74 PENAIILFSQML-RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
E A+ L+ +M+ + + + F SVLKA +G D G +VH +K G++ + V
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKAC-SGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
+SLL MY +DDA F + ++ V+W++++ + + + L FS+M+ E E
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P + SV A + GSL G+ VH +V++ + A + N+L+ MY K G + AE++
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F + R W M++ Q G + + F KM + PNQVT + VL AC+ G +
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRA 344
EG+ + + ++PE +D LG A
Sbjct: 319 KEGRSVHGFVIRRAMDPE-------LDFLGPA 343
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 8/311 (2%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
Q+HA G + + L++ YA+ + + +F + W LI +
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 175 EGEKALRTFSEML-REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
E+A+ + EM+ ++ + ++F + SV A + G L G VH VIK G + A V
Sbjct: 79 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+L+ MY + ++DA K F+ + RDVV+W+S++ Q+G + F +M+ +
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ VT L V ACS G L G+ + + +E + + + + G+ G L A +
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVE--LGAYAAERIFELDPHDSGPHILLANIYASAG 411
+P TA W ++ + L +A + F+++P+ + + + +
Sbjct: 259 FENVPCRMTAP-WTPMISCYNQSGCFQEALNVFAKMQEFKMEPN----QVTMVGVLCACA 313
Query: 412 RLNDAARARKM 422
RL R +
Sbjct: 314 RLGRVKEGRSV 324
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/574 (39%), Positives = 332/574 (57%), Gaps = 38/574 (6%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I +++ YAK G L+ AR+ FDEMP + +V+W A+ S Y+Q + P+ A+ LF QML
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ P+ T V +S + D + + N +V ++LLDM+A+F +
Sbjct: 251 EEGITPDDTTWV-VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNL 309
Query: 146 DDAWFLFTALES--------------------------------KNEVSWNALIAGHARK 173
+ A +F L S ++ VSWN++IAG+A+
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 174 SEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
E ++ F EM+ +P + +SV +A G+L+ WV V + +L
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N+L+ MY+K GS+ DA ++F + RDVVS+N++++G A +G GK ++ M GI
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+ VT++ VLTACSHAGLL+EG+ F ++ P HY VDLLGRAG LD A
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA----PTVDHYACMVDLLGRAGELDEAKM 545
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
I+ MP++P A V+G+LL A R+HK V LG AA ++FEL+P + G ++LL+NIYAS GR
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
D R R+MMK+ G+KK SWVE K VH F D +H Q I+K E+ K+K+
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKR 665
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
+G+V D S L +++E+E L HSEKLA+ FAL+ + G+TI + KN+R+C DCH+A
Sbjct: 666 VGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTA 725
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK+ REI+VRD NRFH F +G CSC DYW
Sbjct: 726 IKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 162/404 (40%), Gaps = 101/404 (25%)
Query: 49 LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
+F P D ++ ++ YS+ + LF L L+P F ++K +G
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD---------------------- 146
K G HA+ LK G+ + ++ +++LDMYA+ Q+D
Sbjct: 112 --KSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMIS 169
Query: 147 ---------DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE------------ 185
+A LF + ++N ++W +++ G+A+ + E A R F E
Sbjct: 170 GCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAM 229
Query: 186 -------------------MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
ML EG P ++ ++ +S G + + +
Sbjct: 230 QSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL------------------------------ 256
L +FV L+DM+AK G++E A +F+ L
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349
Query: 257 --LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLD 313
KRDVVSWNSM+ G AQ+G ++ F++M+ I P++VT VL+AC H G L
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALK 409
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
++++ ++ + + + + + + G + A + + M
Sbjct: 410 LSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H+ LK + V + K I+ N+++ Y+KCG + +A ++F M +D+V++
Sbjct: 402 CGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSF 461
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
LISG++ N + AI L M G++P+ T VL A S AG ++ G+ V
Sbjct: 462 NTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE--GKNV---- 515
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEG 176
K V + ++D+ R ++D+A L ++ K + +L+ H R G
Sbjct: 516 FKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLG 575
Query: 177 EKALRTFSEMLREGFEPTHF-SYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
E A E+ EP + +Y + AS G E K V ++K GG
Sbjct: 576 ELAASKLFEL-----EPQNLGNYVLLSNIYASFGRWEDVKRVR-EMMKKGG 620
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/574 (39%), Positives = 332/574 (57%), Gaps = 38/574 (6%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I +++ YAK G L+ AR+ FDEMP + +V+W A+ S Y+Q + P+ A+ LF QML
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
G+ P+ T V +S + D + + N +V ++LLDM+A+F +
Sbjct: 251 EEGITPDDTTWV-VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNL 309
Query: 146 DDAWFLFTALES--------------------------------KNEVSWNALIAGHARK 173
+ A +F L S ++ VSWN++IAG+A+
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 174 SEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
E ++ F EM+ +P + +SV +A G+L+ WV V + +L
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
N+L+ MY+K GS+ DA ++F + RDVVS+N++++G A +G GK ++ M GI
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
P+ VT++ VLTACSHAGLL+EG+ F ++ P HY VDLLGRAG LD A
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA----PTVDHYACMVDLLGRAGELDEAKM 545
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
I+ MP++P A V+G+LL A R+HK V LG AA ++FEL+P + G ++LL+NIYAS GR
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ 472
D R R+MMK+ G+KK SWVE K VH F D +H Q I+K E+ K+K+
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKR 665
Query: 473 IGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSA 532
+G+V D S L +++E+E L HSEKLA+ FAL+ + G+TI + KN+R+C DCH+A
Sbjct: 666 VGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTA 725
Query: 533 FKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK+ REI+VRD NRFH F +G CSC DYW
Sbjct: 726 IKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 162/404 (40%), Gaps = 101/404 (25%)
Query: 49 LFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
+F P D ++ ++ YS+ + LF L L+P F ++K +G
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD---------------------- 146
K G HA+ LK G+ + ++ +++LDMYA+ Q+D
Sbjct: 112 --KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMIS 169
Query: 147 ---------DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE------------ 185
+A LF + ++N ++W +++ G+A+ + E A R F E
Sbjct: 170 GCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAM 229
Query: 186 -------------------MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
ML EG P ++ ++ +S G + + +
Sbjct: 230 QSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 227 QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL------------------------------ 256
L +FV L+DM+AK G++E A +F+ L
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFD 349
Query: 257 --LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLD 313
KRDVVSWNSM+ G AQ+G ++ F++M+ I P++VT VL+AC H G L
Sbjct: 350 NMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALK 409
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
++++ ++ + + + + + + G + A + + M
Sbjct: 410 LSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H+ LK + V + K I+ N+++ Y+KCG + +A ++F M +D+V++
Sbjct: 402 CGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSF 461
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
LISG++ N + AI L M G++P+ T VL A S AG ++ G+ V
Sbjct: 462 NTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE--GKNV---- 515
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEG 176
K V + ++D+ R ++D+A L ++ K + +L+ H R G
Sbjct: 516 FKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLG 575
Query: 177 EKALRTFSEMLREGFEPTHF-SYSSVFTALASTGSLEQGKWVHAHVIKSGG 226
E A E+ EP + +Y + AS G E K V ++K GG
Sbjct: 576 ELAASKLFEL-----EPQNLGNYVLLSNIYASFGRWEDVKRVR-EMMKKGG 620
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 331/572 (57%), Gaps = 8/572 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + E + +H HI+ FK+ + N ++ Y KCG L A+ +F P +++ +
Sbjct: 66 RCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFS 125
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT +++ ++ N +A+ L M G+ PN T +L A A + D+ GR +H
Sbjct: 126 WTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDR-GRALHRRI 184
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G+ +++V + L++MYA+ + DA +F +L S++ ++W AL+A +A AL
Sbjct: 185 ACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDAL 244
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
+ F M +G EPT ++ +V A G+ VH VI + + VGN L++MY
Sbjct: 245 KVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMY 303
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-----GIAPN 295
K S ++A KVF+ + ++D+++WNSM+ Q+G G + +++M + GI +
Sbjct: 304 GKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHD 363
Query: 296 QVTFLCVLTACSHAGLL-DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+TF+ VL ACSHAGL+ D + Y +++ +G +P +DLLGRAG LD A +FI
Sbjct: 364 DITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFI 423
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
MP P +W LLGAC H +VE A AA+RI L P DSG ++ L+N+YA A R +
Sbjct: 424 NSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWD 483
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
D AR RK+M + GV K S +E +H F+A D +HP++ I+++ R I I++ G
Sbjct: 484 DMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERG 543
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
YVPD VL A ++ +E HSE+LA+AF +IS+P G+ + I KN+RVC DCHSA K
Sbjct: 544 YVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATK 603
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK R+IIVRD NRFH FR+G CSC DYW
Sbjct: 604 IISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 337/566 (59%), Gaps = 2/566 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT K +H+ ++ F +D+A ++L+ Y+ G L++A K+F+E+P + +VTW
Sbjct: 121 CTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TAL SGY+ + AI LF +M+ +G++P+ + + VL A D G +
Sbjct: 181 TALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSAC-VHVGDLDSGEWIVKHME 239
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ N +V ++L+++YA+ +M+ A +F ++ K+ V+W+ +I G+A S ++ +
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +ML+E +P FS ++ AS G+L+ G+W + + + F+ N L+DMYA
Sbjct: 300 FFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ +VF + ++D+V N+ ++G A++G K + F + + GI+P+ TFL
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L C HAGL+ +G +F A+ + ++ HY VDL GRAG+LD A + I +MP+
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A VWGALL CR+ K+ +L + + L+P ++G ++ L+NIY+ +GR ++AA R
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVR 539
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
MM G+KK P SW+E + VH F+A+D +HP I+ K ++ +++ +G+VP +
Sbjct: 540 DMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE 599
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
V + +E+E L HSEKLA+AF LIST G I + KN+RVCGDCH K SK+
Sbjct: 600 FVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKIT 659
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
REI+VRD NRFH F +G CSC DYW
Sbjct: 660 RREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+QVH + + + ++ + LL F Q ++ LF+ + N +N LI G
Sbjct: 30 KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ L F + + G F++ V A + + G +H+ V+K G
Sbjct: 90 HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
+L+ +Y+ SG + DA KVF + +R VV+W ++ +G G + + F+KM+ G+
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
P+ + VL+AC H G LD G+ M++ ++ T V+L + G +++A
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 354 IREMPIEPTAAVWGALL 370
M E W ++
Sbjct: 270 FDSMG-EKDIVTWSTMI 285
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 330/567 (58%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++KE + H ++L S ++N +++ Y++C +D A ++ D +P D+ ++
Sbjct: 138 CADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSY 197
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+++S ++ A + +M+ + + T SVL A D + G Q+HA L
Sbjct: 198 NSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLC-AQIRDLQLGLQIHAQLL 256
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++V+V S+L+D Y + ++ +A F L +N V+W A++ + + E+ L
Sbjct: 257 KTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLN 316
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F++M E P F+++ + A AS +L G +H ++ SG + VGN L++MY+
Sbjct: 317 LFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYS 376
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
KSG+I+ + VF+ ++ RDV++WN+M+ G + HGLGK + F+ M+ G PN VTF+
Sbjct: 377 KSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIG 436
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP-I 359
VL+AC H L+ EG YF +MKK VEP HY V LLGRAGLLD A F++ +
Sbjct: 437 VLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQV 496
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
+ W LL AC +H+N LG E + ++DPHD G + LL+N++A A + + +
Sbjct: 497 KWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKI 556
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
RK+MKE +KKEP SW++ +N H+FV+ HP+ I +K +++ IK +GY PD
Sbjct: 557 RKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDV 616
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
VL + +++E L HSEKLALA+ L+ PP I I KN+R+C DCH A K SK
Sbjct: 617 GVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKA 676
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
R IIVRD NRFHHFR+G C+C D+W
Sbjct: 677 TNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/569 (25%), Positives = 251/569 (44%), Gaps = 72/569 (12%)
Query: 6 KKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
K L+ + +HA ++ ++ +DI N+++N Y+KCG ARKLFD M +++V+W+
Sbjct: 37 KSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWS 96
Query: 63 ALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
AL+ GY + + LF ++ L PN++ + VL A + K G+Q H + L
Sbjct: 97 ALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCC-ADSGRVKEGKQCHGYLL 155
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + YV ++L+ MY+R +D A + + + S+N++++ +A +
Sbjct: 156 KSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQ 215
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
M+ E +Y SV A L+ G +HA ++K+G FV +TL+D Y
Sbjct: 216 VLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYG 275
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + +A K F+ L R+VV+W ++LT Q+G + T+ F KM PN+ TF
Sbjct: 276 KCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAV 335
Query: 302 VLTACSHA-----GLLDEGQGYFALMKKHGVEPE------------EAHYVTFVDLLGRA 344
+L AC+ G L G+ + K H + ++ Y F +++ R
Sbjct: 336 LLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRD 395
Query: 345 --------------GLLDRALKFIREMPIE---PTAAVWGALLGACRMHKNVELGAYAAE 387
GL +AL ++M P + +L AC V+ G Y +
Sbjct: 396 VITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFD 455
Query: 388 RI---FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
+I F+++P ++A + AG L++ A MK + K +W NA H
Sbjct: 456 QIMKKFDVEPGLEHYTCMVA-LLGRAGLLDE---AENFMKTTTQVKWDVVAWRTLLNACH 511
Query: 445 MFVANDDAHPQRAMIHKKW---REISEKIKQIGYVPDSSHVLSYADQQEREAKLQ----- 496
IH+ + ++I+E + Q+ D V +Y AK +
Sbjct: 512 --------------IHRNYNLGKQITETVIQM----DPHDVGTYTLLSNMHAKARKWDGV 553
Query: 497 VHSEKLALAFALISTPPGSTIHIKKNIRV 525
V KL + P S + I+ N V
Sbjct: 554 VKIRKLMKERNIKKEPGASWLDIRNNTHV 582
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 98 SVLKASGAGATDDKFGRQVHAFCL---KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTA 154
++LK S A A +FG+ +HA + + D ++ +SL+++Y++ Q A LF
Sbjct: 28 NLLKFS-ATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR 86
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQ 213
+ +N VSW+AL+ G+ K E + L F ++ + P + ++ V + A +G +++
Sbjct: 87 MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
GK H +++KSG L +V N L+ MY++ ++ A ++ + + DV S+NS+L+ +
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
G + ++M+ + + VT++ VL C+ L G A + K G+ +
Sbjct: 207 SGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFV 266
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
T +D G+ G + A K + + W A+L A
Sbjct: 267 SSTLIDTYGKCGEVLNARKQFDGLR-DRNVVAWTAVLTA 304
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/600 (35%), Positives = 332/600 (55%), Gaps = 37/600 (6%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L LK VHAH+L + + + ++ YA G +D + +F+ + + +
Sbjct: 81 TGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFN 140
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
++I Y++ E + + M G + FT VLK+S G+ VH L+
Sbjct: 141 SMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSS-VELLSVWMGKCVHGLILR 199
Query: 123 YGYDWNVYVGSSLLDMYAR----------FDQM---------------------DDAWFL 151
G +++YV +SL+ +Y + FD M D A +
Sbjct: 200 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 259
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE--GFEPTHFSYSSVFTALASTG 209
F + +N VSW +I+G+++ ++AL F EM++E G P + SV A A
Sbjct: 260 FERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 319
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSM 267
+LE+G+ +H + G A V L MYAK GS+ DA F++L + +++++WN+M
Sbjct: 320 TLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTM 379
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HG 326
+T A +G G V F +M++ GI P+ +TF +L+ CSH+GL+D G YF M +
Sbjct: 380 ITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYS 439
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+ P HY DLLGRAG L A K + EMP+ ++WG+LL ACR H+N+E+ AA
Sbjct: 440 INPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAA 499
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
++F L+P ++G ++LL+N+YA AGR + + R ++K G KK P CSW+E HMF
Sbjct: 500 RKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMF 559
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
+ D +HPQ I+ + EK+K GY PD+S+VL ++E+E L HSEKLA+AF
Sbjct: 560 LGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAF 619
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+++TP + + + KN+R+CGDCH+A F S++ RE+IVRD NRFHHF+ G CSCGDYW
Sbjct: 620 GILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 16/271 (5%)
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L+ + L P SY+ VF L L+ G VHAH++ G Q A VG+ +V
Sbjct: 55 LQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA SG I+ + VFN + + + +NSM+ A++G + TV + M G + TF
Sbjct: 115 YASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTF 174
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
VL + + G+ L+ + G++ + + + L G+ G ++ A K M I
Sbjct: 175 PFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDP-HDSGPHILLANIYASAGRLNDA-A 417
++ W ALL ++ AA IFE P + + + Y+ +G A +
Sbjct: 235 RDVSS-WNALLAGYTKSGCID----AALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289
Query: 418 RARKMMKE-SGVKKE--------PACSWVET 439
+M+KE SGV+ PAC+ + T
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLST 320
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDMV 59
C L L+ R +H ++ ++ + YAKCG L +AR FD++ K+++
Sbjct: 315 CAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLI 374
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W +I+ Y+ A+ F +M++ G++P+ T + +L D + +
Sbjct: 375 AWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 434
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIA 168
Y + V + + D+ R ++ +A L + S W +L+A
Sbjct: 435 STTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLA 484
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/571 (36%), Positives = 340/571 (59%), Gaps = 14/571 (2%)
Query: 2 CTHLKK--LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C HL + L++ + +H H + F D+ +QN++++ YAKCG A +F++M K+++
Sbjct: 93 CAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLI 152
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++T++I Y+ + A L+ +ML G+ P+ + ++ L A + G +H
Sbjct: 153 SYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL----AVCPTIREGEAIH-- 206
Query: 120 CLKYG-YDWNVYVGS-SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K G ++ V S +L+ MY RF ++ A ++F + K+ S+N +IA A+ +G
Sbjct: 207 -VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGS 265
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-L 236
KA+ + EM EP ++++SV A + G+L +GK +H V K G Q NT L
Sbjct: 266 KAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV-KGGDQPTDVAYNTAL 324
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
V+MYAK GS +A VFN ++V +W S+++ +Q G + + +++M G+ P+
Sbjct: 325 VNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDD 384
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VTF + ACSH+GL DEG YF M++ H + P + HY +DLLGR G L A + +R
Sbjct: 385 VTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVR 444
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
MP P W LL AC+++ ++++GA A +RI EL+P DSGP++L+ N+YA AG+ D
Sbjct: 445 TMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWAD 504
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A +KM+K+ G+ K P S +E + +H FV D AHP I + +E+ E++ GY
Sbjct: 505 VAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGY 564
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
PD+ VL +++ + L HSE++AL L+++ G+T+HI KN+R+C DCHS FK
Sbjct: 565 EPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKL 624
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SK++ R+++VRD++RFH F+ G CSCGDYW
Sbjct: 625 VSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 175/348 (50%), Gaps = 12/348 (3%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ N ++ AY +C +D+A F E+ K+ ++ ++ Y +ND + A+ LF + +
Sbjct: 19 LGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEE 78
Query: 89 LKPNQFTLSSVLKASGAGATDD-KFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
L+ NQ T +VLK+ D + G+++H + G+ ++ V +SL+ MYA+
Sbjct: 79 LQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKF 138
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A +F +E KN +S+ ++I + ++ +A + +ML EG P ++Y++ ALA
Sbjct: 139 AAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAA---ALAV 195
Query: 208 TGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
++ +G+ +H +K G + N LV MY + G I A+ VF+ + +D+ S+N
Sbjct: 196 CPTIREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYN 252
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M+ A++ G + + +M + PN TF VL ACS G L EG+ +K
Sbjct: 253 NMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKG- 311
Query: 326 GVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G +P + Y T V++ + G A + ++ W +L+ A
Sbjct: 312 GDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLK-NVFTWTSLMSA 358
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 140/337 (41%), Gaps = 42/337 (12%)
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
++G+ L+ Y R +DDA F+ + KNE S+ ++ + +KAL+ F + +
Sbjct: 17 TFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSIN 76
Query: 189 EGFEPTHFSYSSVFTALASTGS--LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
E + +Y +V + A G LE GK +H H I G V N+L+ MYAK GS
Sbjct: 77 EELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSF 136
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ A VF ++ ++++S+ SM+ ++KML GI P+ + L C
Sbjct: 137 KFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC 196
Query: 307 SHAGLLDEGQGYFALMKKH-----------------------------GVEPEE-AHYVT 336
+ EG+ + H G+ ++ A Y
Sbjct: 197 P---TIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNN 253
Query: 337 FVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
+ + + +A+ EM +EP + ++L AC + G +++ D
Sbjct: 254 MIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGD 313
Query: 394 -PHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
P D + L N+YA G ++ AR + + G+K
Sbjct: 314 QPTDVAYNTALVNMYAKCGSTHE---ARAVFNDCGLK 347
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 326/526 (61%), Gaps = 7/526 (1%)
Query: 46 ARKLFD--EMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKPNQFTLSSVLKA 102
A K+F E P+ ++ W LI GY++ +A+ L+ +M G ++P+ T +LKA
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKA 130
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
G A D + G +H+ ++ G+ +YV +SLL +YA + A+ +F + K+ V+
Sbjct: 131 VGKMA-DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN++I G A + E+AL ++EM +G +P F+ S+ +A A G+L GK H ++I
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMI 249
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K G N L+D+YA+ G +E+A+ +F+ ++ ++ VSW S++ G A +GLGK +
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIE 309
Query: 283 WFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDL 340
F+ M + G+ P ++TF+ +L ACSH G++ EG YF M +++ +EP H+ VDL
Sbjct: 310 LFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDL 369
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
L RAG + +A ++I +MP++P +W LLGAC +H + +L A +I +L+P+ SG +
Sbjct: 370 LARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDY 429
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LL+N+YAS R +D + RK M GV+K P S VE N VH F+ D +HPQ MI+
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIY 489
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK 520
K +E++++++ GYVP S+V +++E+E L HSEK+A+AF LISTP I +
Sbjct: 490 AKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVV 549
Query: 521 KNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN++VC DCH A K SKV REI+VRD +RFHHF++G CSC DYW
Sbjct: 550 KNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 161/278 (57%), Gaps = 13/278 (4%)
Query: 7 KLKEARI---VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
K+ + R+ +H+ ++ S F + I +QN++L+ YA CG + A K+FD+MP KD+V W +
Sbjct: 133 KMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 192
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLK 122
+I+G+++N +PE A+ L+++M G+KP+ FT+ S+L A + GA G++ H + +K
Sbjct: 193 VINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGAL--TLGKRFHVYMIK 250
Query: 123 YGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G N++ + LLD+YAR ++++A LF + KN VSW +LI G A G++A+
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIEL 310
Query: 183 FSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV---IKSGGQLVAFVGNTLVD 238
F M +EG P ++ + A + G +++G + K ++ F +VD
Sbjct: 311 FKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHF--GCMVD 368
Query: 239 MYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG 275
+ A++G ++ A E + ++ +VV W ++L C HG
Sbjct: 369 LLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHG 406
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + H +++ ++ N +L+ YA+CG ++EA+ LFDEM K+ V+W
Sbjct: 232 CAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291
Query: 62 TALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
T+LI G + N + AI LF M + GL P + T +L A S G + F
Sbjct: 292 TSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGF-EYFRRM 350
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEK 178
+Y + + ++D+ AR Q+ A+ ++ N V W L+ A G+
Sbjct: 351 SEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLG--ACTVHGDS 408
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW-----VHAHVIKSGGQLVAFVG 233
L + M EP H S + L++ + EQ +W + +++ G + V G
Sbjct: 409 DLAELARMKILQLEPNH---SGDYVLLSNMYASEQ-RWSDVQKIRKQMLRDGVRKVP--G 462
Query: 234 NTLVDM 239
++LV++
Sbjct: 463 HSLVEV 468
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/531 (37%), Positives = 333/531 (62%), Gaps = 5/531 (0%)
Query: 8 LKEARIVHAH-ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++ R+ AH + + D+ ++ YA G ++ A+K+FDE+PVKD+V+W A+IS
Sbjct: 137 VQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMIS 196
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY++ + A+ LF M++ ++P++ T+ +V+ A A + + GRQVH++ +G+
Sbjct: 197 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC-AQSGSIELGRQVHSWIDDHGFG 255
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
N+ + ++L+D+Y++ +++ A LF L K+ +SWN LI G+ + ++AL F EM
Sbjct: 256 SNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 315
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK--SGGQLVAFVGNTLVDMYAKSG 244
LR G P + S+ A A G+++ G+W+H ++ K G + + +L+DMYAK G
Sbjct: 316 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCG 375
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
IE A +VFN +L + + SWN+M+ G A HG A+ F +M +NGI P+ +TF+ +L+
Sbjct: 376 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLS 435
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSH+G+LD G+ F ++ + + + P+ HY +DLLG +GL A + I M +EP
Sbjct: 436 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 495
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+W +LL AC+MH NVELG A+ + +++P + G ++LL+NIYA+AGR N+ A R ++
Sbjct: 496 VIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALL 555
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+ G+KK P CS +E + VH F+ D HP+ I+ E+ +++ G+VPD+S VL
Sbjct: 556 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 615
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
+++ +E L+ HSEKLA+AF LIST PG+ + I KN+RVC +CH A+K
Sbjct: 616 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 204/407 (50%), Gaps = 42/407 (10%)
Query: 8 LKEARIVHAHILGSAFKN-----DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
L+ R++HA ++ + N ++ IL+ + L A +F+ + +++ W
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDG--LPYAISVFETIQEPNLLIWN 60
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLK 122
+ G++ + P +A+ L+ M+ LGL PN +T +LK S A + K G+Q+H LK
Sbjct: 61 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLK-SCAKSKAFKEGQQIHGHVLK 119
Query: 123 YGYDWNVYVGSSLLDMYAR----------FDQ---------------------MDDAWFL 151
G D ++YV +SL+ MY + FD+ +++A +
Sbjct: 120 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKM 179
Query: 152 FTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSL 211
F + K+ VSWNA+I+G+A ++AL F +M++ P + +V +A A +GS+
Sbjct: 180 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 239
Query: 212 EQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGC 271
E G+ VH+ + G + N L+D+Y+K G +E A +F L +DV+SWN+++ G
Sbjct: 240 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH--GVEP 329
L K + F++MLR+G PN VT L +L AC+H G +D G+ + K GV
Sbjct: 300 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVAN 359
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+ + +D+ + G ++ A + + + + + W A++ MH
Sbjct: 360 ASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 405
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 173/337 (51%), Gaps = 18/337 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C ++ R VH+ I F +++ + N +++ Y+KCG L+ A LF+ +P KD+++W
Sbjct: 233 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISW 292
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
LI GY+ + + A++LF +MLR G PN T+ S+L A GA D GR +H +
Sbjct: 293 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID--IGRWIHVYI 350
Query: 121 LKY--GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
K G + +SL+DMYA+ ++ A +F ++ K+ SWNA+I G A +
Sbjct: 351 DKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 410
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG----- 233
+ FS M + G EP ++ + +A + +G L+ G+ H+ +S Q
Sbjct: 411 SFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMTQDYKMTPKLEHY 466
Query: 234 NTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
++D+ SG ++AE++ N + ++ D V W S+L C HG + + + +++ I
Sbjct: 467 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIK--I 524
Query: 293 AP-NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
P N +++ + + AG +E AL+ G++
Sbjct: 525 EPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMK 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIED---AEKVFNRLLKRDVVSWNSM 267
L+ + +HA +IK+G + + L++ S + A VF + + +++ WN+M
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
G A + ++ + M+ G+ PN TF +L +C+ + EGQ + K G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
+ + + + + + + G L+ A K E P + + AL+ +E A+
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVS-YTALIKGYASRGYIE----NAQ 177
Query: 388 RIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
++F+ P D + + YA G +A K M ++ V+ +
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 222
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 304/491 (61%), Gaps = 2/491 (0%)
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
A+ LF +M L + +S+L +GA D K GRQ+HA + G ++G++L+
Sbjct: 2 ALQLFREMQTLSFDRHTLPFASLLSVAGA-LPDIKIGRQIHAQLILLGLTLEDFMGNALI 60
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
DMY++ +D A +F K +SW ALI G + + E+AL+ F M R G P
Sbjct: 61 DMYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRA 120
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
+ SS+ + +S G + G+ +HA++ SG F G+ L+DMYAK G +++A + FN +
Sbjct: 121 TCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEM 180
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+++ ++WN++++ AQ+G K +R F+ ML G P+ VTFL VL ACSH GL +E
Sbjct: 181 PEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECM 240
Query: 317 GYFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
YF LM+ + + P + HY +D LGRAG D+ K + EMP E +W ++L +CR+
Sbjct: 241 KYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRI 300
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
+ N +L AAE +F + P D+ +++L+NIYA AG AAR +K+M++ GV+KE S
Sbjct: 301 YGNQDLATVAAENLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNS 360
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKL 495
WVE K ++MF +ND +P I ++ + E++ + GY PD+S L D +++ L
Sbjct: 361 WVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESL 420
Query: 496 QVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
+ HSE+LA+AFALI+TPPG+ I + KN+ C DCH+A K SK+V R+IIVRD+ RFHHF
Sbjct: 421 KYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHHF 480
Query: 556 RDGFCSCGDYW 566
+DGFCSCGDYW
Sbjct: 481 KDGFCSCGDYW 491
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 148/273 (54%), Gaps = 3/273 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L +K R +HA ++ + M N +++ Y+KCG LD A+ +F K ++WTAL
Sbjct: 31 LPDIKIGRQIHAQLILLGLTLEDFMGNALIDMYSKCGMLDAAKTIFANKSDKTAISWTAL 90
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I+G QN Q E A+ LF M R GL P++ T SS++K+S + GRQ+HA+ G
Sbjct: 91 ITGCVQNGQHEEALQLFCNMRRAGLSPDRATCSSIIKSSSSLGV-IGIGRQLHAYLTTSG 149
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ +V+ GS+LLDMYA+ +D+A F + KN ++WNA+I+ +A+ + + A+R F
Sbjct: 150 HMSSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFD 209
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
ML GF P ++ SV A + G E+ K+ + + ++D ++
Sbjct: 210 SMLHCGFCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNSMSPWKEHYSCVIDALGRA 269
Query: 244 GSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
G + +KV + + + D V W+S+L C +G
Sbjct: 270 GCFDKIQKVLDEMPFEADPVIWSSILHSCRIYG 302
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/588 (36%), Positives = 335/588 (56%), Gaps = 37/588 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V HI+ F++ +++ N++++ ++ ++EA +FD M D+++W A+IS Y+ +
Sbjct: 498 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 557
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
++ F M L + N T S L + + + K+GR +H +K G D NV + +
Sbjct: 558 CRESLRCFHWMRHLHNETNS-TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 616
Query: 134 SLLDMYARFDQMDDAWFLFTALESKN---------------------------------- 159
+LL +Y+ + +DA +F A+ ++
Sbjct: 617 TLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPD 676
Query: 160 EVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHA 219
V+WNALI GHA E +A++ + +++RE P ++ A A+ LE+G+ +H
Sbjct: 677 RVTWNALIGGHAENEEPNEAVKAY-KLIREKGIPANYITMVSLAATANLAVLEEGQQLHG 735
Query: 220 HVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKA 279
VIK G + V N +DMY K G + D K+ + + R +SWN +++ A+HG +
Sbjct: 736 LVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQK 795
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFV 338
F +ML+ G P+ VTF+ +L+AC+H GL+DEG Y+ ++ ++ GV P H V +
Sbjct: 796 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 855
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSG 398
DLLGR+G L A FI+EMP+ P W +LL ACR+H N+EL AE + ELDP D
Sbjct: 856 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 915
Query: 399 PHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAM 458
++L +N+ A++G+ D RK M + +KK+PACSWV+ K+ VH F + HPQ +
Sbjct: 916 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 975
Query: 459 IHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIH 518
I K E+ + K+ GYVPD+S L D++++E L HSE+LALAF LI+TP ST+
Sbjct: 976 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1035
Query: 519 IKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
I KN+RVCGDCHS +KF S +V R+I++RD RFHHF G CSCGDYW
Sbjct: 1036 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 209/477 (43%), Gaps = 94/477 (19%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K K+ ++H H++ + F +D+ + ++ Y K G + AR +FD MP + +V+W
Sbjct: 40 CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSW 99
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA++SGYSQN + E A +LFS M G+K N
Sbjct: 100 TAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH---------------------------- 131
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+L+D +++ +M+DA +LF + ++ VSWNA+I G+A + + +
Sbjct: 132 ------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFC 179
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG---------------- 225
F MLR G P ++ SV A A G L +H + + G
Sbjct: 180 MFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYA 239
Query: 226 --GQL-----------------------------VAFVGNTLVDMYAKSGSIEDAEKVFN 254
G L + +GN L+DMYAKSG IEDA++ F+
Sbjct: 240 KNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFD 299
Query: 255 RLLKRDVVSWNSMLTGCAQHGLGK-ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +++V+SW S+++G A+HG G A R+ +R+ N+ ++ +L+ GL +
Sbjct: 300 EMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRH---RNEASWSTMLSGYVRVGLYE 356
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
E G F M GVEP + + R+G + F + T + +G
Sbjct: 357 EAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTA 415
Query: 374 RMHKNVELG-AYAAERIFELDP-HDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
+H +G Y A+++FE P H+ L Y+ +G + + M++ GV
Sbjct: 416 LVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 472
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 218/453 (48%), Gaps = 43/453 (9%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VH ++ + D+ + +++ Y G + A+KLF+EMP ++V+WT+L+ GYS +
Sbjct: 397 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 456
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P + ++ +M + G+ NQ T ++V + G D G QV ++YG++ +V V +
Sbjct: 457 PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL-LEDQVLGYQVLGHIIQYGFEDSVSVAN 515
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ M++ F +++A ++F + + +SWNA+I+ +A ++LR F M E
Sbjct: 516 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 575
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ SS+ + +S +L+ G+ +H V+K G + NTL+ +Y+++G EDAE VF
Sbjct: 576 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 635
Query: 254 NRLLKRDVVSWNSMLTGCAQHG--------------LGKA-------------------- 279
+ +RD++SWNSM+ Q G +GK
Sbjct: 636 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNE 695
Query: 280 TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
V+ ++ + GI N +T + L A ++ +L+EGQ L+ K G E + +D
Sbjct: 696 AVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMD 754
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGP 399
+ G+ G + LK + + PI + W L+ A H + + +L P
Sbjct: 755 MYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD-- 811
Query: 400 HILLANIYASA--GRLNDAARAR--KMMKESGV 428
H+ ++ ++ G L D A M +E GV
Sbjct: 812 HVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 844
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 218/451 (48%), Gaps = 44/451 (9%)
Query: 16 AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQP- 74
A I G A + M N +++ YAK G +++A++ FDEM K++++WT+LISGY+++
Sbjct: 264 ALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGH 323
Query: 75 --------------------------------ENAIILFSQMLRLGLKPNQFTLSSVLKA 102
E A+ LF QM LG++PN F ++S++ A
Sbjct: 324 MAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITA 383
Query: 103 -SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV 161
S +G D+ G QVH F +K G +VYVG++L+ Y + +A LF + N V
Sbjct: 384 CSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 442
Query: 162 SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ---GKWVH 218
SW +L+ G++ + L + M +EG ++++V +S G LE G V
Sbjct: 443 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV---TSSCGLLEDQVLGYQVL 499
Query: 219 AHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGK 278
H+I+ G + V N+L+ M++ S+E+A VF+ + + D++SWN+M++ A HGL +
Sbjct: 500 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559
Query: 279 ATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFV 338
++R F M N T +L+ CS L G+G L+ K G++ T +
Sbjct: 560 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 619
Query: 339 DLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL-GAYAAERIFELDPHDS 397
L AG + A + + + E W +++ AC + L G + ++ D
Sbjct: 620 TLYSEAGRSEDA-ELVFQAMTERDLISWNSMM-ACYVQDGKCLDGLKILAELLQMGKPDR 677
Query: 398 GPHILLANIYASAGRLNDAARARKMMKESGV 428
L +A N+A +A K+++E G+
Sbjct: 678 VTWNALIGGHAENEEPNEAVKAYKLIREKGI 708
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 145/308 (47%), Gaps = 44/308 (14%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM-------- 58
LK R +H ++ +++ + NT+L Y++ G ++A +F M +D+
Sbjct: 592 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 651
Query: 59 --------------------------VTWTALISGYSQNDQPENAIILFSQMLRLGLKPN 92
VTW ALI G+++N++P A+ + + G+ N
Sbjct: 652 CYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 711
Query: 93 QFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLF 152
T+ S+ + ++ G+Q+H +K G++ +++V ++ +DMY + +M D +
Sbjct: 712 YITMVSLAATANLAVLEE--GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 769
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
+++ +SWN LI+ AR +KA TF EML+ G +P H ++ S+ +A G ++
Sbjct: 770 PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVD 829
Query: 213 QGKWVHAHVIKSGGQLVAFVG----NTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+G + + + G F G ++D+ +SG + AE + + + ++W S+
Sbjct: 830 EGLAYYDSMTREFG---VFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSL 886
Query: 268 LTGCAQHG 275
L C HG
Sbjct: 887 LAACRIHG 894
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L L+E + +H ++ F++D+ + N ++ Y KCG + + K+ + + ++W
Sbjct: 723 NLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNI 782
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LIS ++++ + A F +ML+LG KP+ T S+L A G D+ + ++
Sbjct: 783 LISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREF 842
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEKALRT 182
G + ++D+ R ++ A F+ N+++W +L+A E A +T
Sbjct: 843 GVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKT 902
Query: 183 FSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+L +P+ S +++ + +T GKW
Sbjct: 903 AEHLLE--LDPSDDSAYVLYSNVCAT----SGKW 930
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 340/566 (60%), Gaps = 23/566 (4%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDM 58
+C+ K+LK+ +HA +L + D + ++ A A LD A+++FD++P ++
Sbjct: 44 QCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLK-PNQFTLSSVLKASGAGATDDKF-GRQV 116
TW LI Y+ + P ++++F +ML P++FT ++KA A ++ F G+
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKA--ASELEELFTGKAF 158
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
H +K +V++ +SL+ YA+ ++ + +F ++ VSWN++I +
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+AL F EM + +P + V +A A E G+WVH+++ ++ + N +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAM 278
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ------------HGLGKATVRWF 284
+DMY K GS+EDA+++F+++ ++D+VSW +ML G A+ HG GK + F
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALF 338
Query: 285 EKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGR 343
KM + + PN VTF +L ACSH GL++EG+ +F M+ +GV P HY VD+LGR
Sbjct: 339 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR 398
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILL 403
AGLL+ A++ I +MP+ P A+VWGALLGAC +H+NV L A ++ EL+P + G ++LL
Sbjct: 399 AGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLL 458
Query: 404 ANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKW 463
+NIYA AG+ + + RK+M++ G+KKEP CS +E VH F+ D++HP I+ K
Sbjct: 459 SNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKL 518
Query: 464 REISEKIKQIGYVPDSSHVLSYADQQE-REAKLQVHSEKLALAFALISTPPGSTIHIKKN 522
EI +++ IGYVP+ SH+L ++++ +E L +HSEKLA+AF LIST I I KN
Sbjct: 519 DEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKN 578
Query: 523 IRVCGDCHSAFKFASKVVEREIIVRD 548
+RVCGDCHS K SK+ +REI++RD
Sbjct: 579 LRVCGDCHSVAKLVSKLYDREILLRD 604
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 327/538 (60%), Gaps = 42/538 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L +H I S + D+ M + +++ Y+KC + A++ FD+M V+++V+W
Sbjct: 161 CAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSW 220
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+ Y QN A+ +F +M+ G++P++ TL+SV A A + + G Q+HA +
Sbjct: 221 NSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASAC-ASLSAIREGLQIHARVM 279
Query: 122 KYG-YDWNVYVGSSLLDMYAR----------FDQM---------------------DDAW 149
K+ Y ++ +G++L+DMYA+ FD+M A
Sbjct: 280 KHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAAR 339
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F+ + +N VSWNALIAG+ + E E+A+R F + RE PTH+++ ++ A A+
Sbjct: 340 LMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399
Query: 210 SLEQGKWVHAHVIK------SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
L+ G+ H H++K SG FVGN+L+DMY K G +ED VF R+L+RD VS
Sbjct: 400 DLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVS 459
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
WN+M+ G AQ+G G + F +ML +G P+ VT + VL+ACSHAGL++EG+ YF M
Sbjct: 460 WNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMT 519
Query: 324 -KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
+HG+ P + HY VDLLGRAG LD A I+ MP+EP A VWG+LL AC++H N+ LG
Sbjct: 520 IEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLG 579
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
Y AER+ E+DP +SGP++LL+N+YA GR D R RK M++ GV K+P CSW+ ++
Sbjct: 580 KYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSH 639
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
+H+F+ D HP + I+ + ++E++K++GYVP++ Y ++E +++L +HSE
Sbjct: 640 LHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADDDEPY--EEESDSELILHSE 695
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 207/438 (47%), Gaps = 71/438 (16%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-------- 53
C K + EAR+VHA I+ + F ++I +QN +++ Y KCG L++ARK+FD M
Sbjct: 29 CVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSW 88
Query: 54 -----------------------PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
P +D +W A++SG++Q D+ E A+ M
Sbjct: 89 NAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFV 148
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N+++ S L A AG D G Q+H K Y +VY+GS+L+DMY++ + A
Sbjct: 149 LNEYSFGSALSAC-AGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
F ++ +N VSWN+LI + + KAL F M+ G EP + +SV +A AS +
Sbjct: 208 AFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267
Query: 211 LEQGKWVHAHVIKSGGQLVAFV-GNTLVDMYAKSGSIEDAEKVFNR-------------- 255
+ +G +HA V+K V GN LVDMYAK + +A VF+R
Sbjct: 268 IREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVS 327
Query: 256 -----------------LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+++R+VVSWN+++ G Q+G + VR F + R I P T
Sbjct: 328 GYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYT 387
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGV---EPEEAHYV---TFVDLLGRAGLLDRALK 352
F +L AC++ L G+ + KHG E++ + +D+ + GL++ +
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG-R 446
Query: 353 FIREMPIEPTAAVWGALL 370
+ E +E W A++
Sbjct: 447 LVFERMLERDNVSWNAMI 464
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 186 MLREGFEPTHFSYSSVFTALAST----GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++R+ F SS F L T S+ + + VHA +IK+ F+ N LVD+Y
Sbjct: 6 LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65
Query: 242 KSGSIEDAEKVFNRLLK-------------------------------RDVVSWNSMLTG 270
K G +EDA KVF+ + + RD SWN+M++G
Sbjct: 66 KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSG 125
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
AQ + +R+ M N+ +F L+AC AGL+D G ++ HG+ +
Sbjct: 126 FAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSAC--AGLMDLSIG----VQIHGLIAK 179
Query: 331 EAHYV------TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ + VD+ + ++ A + +M + + W +L+
Sbjct: 180 SRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVS-WNSLI 224
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/527 (41%), Positives = 317/527 (60%), Gaps = 37/527 (7%)
Query: 76 NAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSS 134
N++ +F M+R+ G PN++T V KA G G + G Q+ +K G + N++V ++
Sbjct: 14 NSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNA 72
Query: 135 LLDMYARFDQMDDA-----WFL--------------------------FTALESKNEVSW 163
++ MYA + +D+A W L F + ++ VSW
Sbjct: 73 MIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132
Query: 164 NALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+IAG+ + ++AL F EML+ G P F+ +S A A+ +L+QG+W+H ++ K
Sbjct: 133 TTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDK 192
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL--LKRDVVSWNSMLTGCAQHGLGKATV 281
S ++ + +L+DMYAK G I+ A KVF+ LK V WN+M+ G A HG K +
Sbjct: 193 SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAI 252
Query: 282 RWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDL 340
FE+M ++PN+VTF+ +L ACSH L++EG+GYF M +G+EPE HY VDL
Sbjct: 253 DLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDL 312
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
LGR+GLL A + + MP+ P A +WGALLGACR+HK++E G + I ELD G H
Sbjct: 313 LGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH 372
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LLAN+Y+++G+ ++A R+ ++ SG KK P CS +E H F+ D +HPQ ++
Sbjct: 373 VLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLY 432
Query: 461 KKWREISEKIKQIGYVPDSSHV-LSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHI 519
E++ K+K GYVP+ V L D++++E L HSEKLA+AF LI+TPPG+ I I
Sbjct: 433 LFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRI 492
Query: 520 KKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+RVC DCH A KF SKV +REIIVRD R+HHF+DGFCSC DYW
Sbjct: 493 VKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 136/258 (52%), Gaps = 7/258 (2%)
Query: 22 AFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILF 81
+ D+ N ++ Y G + A+++FDEM +D+V+WT +I+GY Q + A+ LF
Sbjct: 93 SLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLF 152
Query: 82 SQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR 141
+ML+ G PN+FTL+S L A D+ GR +H + K N + +SLLDMYA+
Sbjct: 153 HEMLQTGPPPNEFTLASALAACANLVALDQ-GRWIHVYIDKSEIKMNERLLASLLDMYAK 211
Query: 142 FDQMDDAWFLF-TALESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYS 199
++D A +F K +V WNA+I G+A + ++A+ F +M E P ++
Sbjct: 212 CGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFV 271
Query: 200 SVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEK-VFNRL 256
++ A + +E+G+ + S G + G +VD+ +SG +++AE+ VFN
Sbjct: 272 ALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYG-CMVDLLGRSGLLKEAEETVFNMP 330
Query: 257 LKRDVVSWNSMLTGCAQH 274
+ D W ++L C H
Sbjct: 331 MAPDATIWGALLGACRIH 348
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 166 LIAGHAR-KSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+I HA + ++R F M+R GF P +++ VF A + + +G+ + H IK
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 224 SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG-LGKA--- 279
G + FV N ++ MYA G +++A +VF+ L +D+ SWN M+ G G +G+A
Sbjct: 61 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEM 120
Query: 280 --------TVRW-------------------FEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
V W F +ML+ G PN+ T L AC++ L
Sbjct: 121 FDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVAL 180
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK-FIREMPIEPTAAVWGALLG 371
D+G+ + K ++ E + +D+ + G +D A K F E ++ W A++G
Sbjct: 181 DQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIG 240
Query: 372 ACRMH 376
MH
Sbjct: 241 GYAMH 245
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 6/228 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLF-DEMPVKDMV- 59
C +L L + R +H +I S K + + ++L+ YAKCG +D A K+F DE +K V
Sbjct: 174 CANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVW 233
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W A+I GY+ + + + AI LF QM + PN+ T ++L A G ++ +
Sbjct: 234 PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSM 293
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDA-WFLFTALESKNEVSWNALIAGHARKSEGEK 178
YG + + ++D+ R + +A +F + + W AL+ + E+
Sbjct: 294 ASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIER 353
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALAS-TGSLEQGKWVHAHVIKSG 225
R ++++E + H + L S +G ++ K V + SG
Sbjct: 354 GQR-IGKIIKE-LDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSG 399
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 340/568 (59%), Gaps = 4/568 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L+E RI+H + F + N ++N Y KCG L+EA ++F M +D+++W
Sbjct: 313 CSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISW 372
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+ + Q+ Q A+ L M G+K ++ + + L K GR +H++ +
Sbjct: 373 NTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAK-GRMIHSWIV 431
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE-GEKAL 180
+ G +V + +++LDMY DDA +F A++ +++VSWNA+I +A + +AL
Sbjct: 432 ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEAL 491
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M GF P S+ + +A A+ SL +GK +H + ++G + V N +++MY
Sbjct: 492 LLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMY 551
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
AKSG++ A K+F ++ DV+SWN M++ AQHG +R+F +M G PN VTF+
Sbjct: 552 AKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFV 611
Query: 301 CVLTACSHAGLLDEG-QGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
V++ACSH GL+ +G Q + +L+ + P HY VDL+ RAG LD A KFI P
Sbjct: 612 SVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAP 671
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
++P + +LGA ++HK+VE +AE + EL P S +++L+N+Y G+ ++ A+
Sbjct: 672 LKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAK 731
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
R++M E ++KEPA S + K VH F D + + I ++ +S ++ + GY PD
Sbjct: 732 IRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPD 791
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
++ +L ++++ L HSEKLA+AF LIST PG+++ I KN+RVCGDCH+A KF SK
Sbjct: 792 TTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISK 851
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+ REI+VRD++RFHHF +G CSCGDYW
Sbjct: 852 ITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 16/379 (4%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L + VHA I SA M + ++ Y CG L +A+ FD MPV+D +TW LI
Sbjct: 12 RSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLI 71
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
+ Q E A+ LF M G+ P +VL A A + GR++H
Sbjct: 72 RAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAM 131
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ + YV ++LL MY + ++DA +F + K V WNA+I +A++ E+A++ F
Sbjct: 132 ESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYA 191
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWV--------HAHVIKSGGQLVAFVGNTLV 237
ML EG + ++ V A + LE K V H H+ S LV
Sbjct: 192 MLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS------FATALV 245
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQV 297
+ Y G +E A + F+R + +++ +M+T Q + F+ ML G+ +++
Sbjct: 246 NFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRI 304
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+ VL ACS L+EG+ M++ + +++ G+ G L+ A++ R M
Sbjct: 305 ACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM 364
Query: 358 PIEPTAAVWGALLGACRMH 376
+ W ++ A H
Sbjct: 365 QHRDVIS-WNTIIAAHGQH 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 42/262 (16%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y+ + +A + SL+ GK VHA + KS F+G+ LV MY GS+ DA+ F+R+
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS-HAGLLDEGQ 316
+D ++W ++ Q G + + F M G+AP F+ VL ACS LL+EG+
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 317 GYFALMKKHGVEPEEAHYV--TFVDLLGRAGLL--------------------------- 347
+++ G E HYV T + + G+ +
Sbjct: 121 RIHGVLR--GTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178
Query: 348 ----DRALKFIREMPIEPTAA---VWGALLGACRMHKNVELGAYAAERIFELDP---HDS 397
++A++ M +E A + +L AC K++E+ + E + HDS
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDS 238
Query: 398 GPHILLANIYASAGRLNDAARA 419
L N Y S G L A RA
Sbjct: 239 SFATALVNFYGSCGDLEQAFRA 260
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 309/506 (61%), Gaps = 2/506 (0%)
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I Y+ +++ +++ +++QM + G+ P+ T +VLK S A + G+ +H +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLK-SVAQLCRQELGKAIHCCII 169
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G++ NVYV ++L++MY + DA +F + +N VSWNALI G+ K +
Sbjct: 170 QMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVID 229
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F EM G +P + V A A G+L QG+W+ ++ + +L FVG L+DMYA
Sbjct: 230 VFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYA 289
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +++AEK+F + ++V +WN +++G A +G G++ ++ F +M+ P++VTFL
Sbjct: 290 KCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLG 349
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC H GL++EG+ YF MK+ G+ P HY VDLLGRAG LD A + I+ M ++
Sbjct: 350 VLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQ 409
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +W LLGACR+H N++LG +A +++ EL+P++ ++LLAN+YA R + R
Sbjct: 410 PDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVR 469
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+MM V+K P CS +E N V+ FV ++ P ++K ++++K+K GYV D+
Sbjct: 470 EMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTG 529
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+++E+E L HSEKLALAF L+ +P G T+ I KN+R+C DCH FK SKV
Sbjct: 530 MASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVY 589
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
R+I VRD NRFHHF G CSC DYW
Sbjct: 590 RRDISVRDRNRFHHFVGGACSCKDYW 615
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 147/269 (54%), Gaps = 7/269 (2%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
+ +H I+ F++++ + ++N Y C + +AR++FDE+P +++V+W ALI+GY+
Sbjct: 161 GKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNH 220
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNV 129
N I +F +M G KP + T+ VL A GA + GR + + NV
Sbjct: 221 NRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQ--GRWIDDYIDHNRLRLNV 278
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+VG++L+DMYA+ +D+A +F A+ KN +WN LI+G+A GE AL+ FS M+ E
Sbjct: 279 FVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIME 338
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIE 247
F+P ++ V A G + +G+ + + G + G +VD+ ++G ++
Sbjct: 339 KFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYG-CMVDLLGRAGFLD 397
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQHG 275
+A+++ + ++ D + W +L C HG
Sbjct: 398 EAQQLIQAMSMQPDPIIWRELLGACRIHG 426
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + R + +I + + ++ + +++ YAKCG +DEA K+F M VK++ TW
Sbjct: 253 CAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTW 312
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LISGY+ N + E+A+ FS+M+ KP++ T VL A ++ +
Sbjct: 313 NVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKE 372
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG---HARKSEGE 177
++G + ++D+ R +D+A L A+ + + + W L+ H GE
Sbjct: 373 EFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGE 432
Query: 178 KALRTFSEM 186
A++ E+
Sbjct: 433 FAIKKLLEL 441
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 336/556 (60%), Gaps = 11/556 (1%)
Query: 13 IVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQND 72
+VH H++ S F+ D + +++++ YA L A++LF+ +D+V+W A+I GY ++
Sbjct: 216 LVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHV 275
Query: 73 QPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
+ +A ++F +M+ + + ++++ D+ R + WN
Sbjct: 276 EMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWN---- 327
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
S+L + + ++DA+ LF+ + ++ VSWN+++A +A+ + +AL F +M G +
Sbjct: 328 -SMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVK 386
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
PT + S+ +A A G+L++G +H ++ + ++ + VG LVDMYAK G I A +V
Sbjct: 387 PTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQV 446
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
FN + +DV++WN+++ G A HG K + F++M G+ PN +TF+ +L+ACSHAG++
Sbjct: 447 FNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 506
Query: 313 DEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLG 371
DEGQ M +G+EP+ HY +DLL RAG L+ A++ I MP+EP + GALLG
Sbjct: 507 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLG 566
Query: 372 ACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
CR+H N ELG +R+ L P SG +ILL+NIYA+A + +DA + R +MK +G+ K
Sbjct: 567 GCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKV 626
Query: 432 PACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQ-IGYVPDSSHVLSYADQQE 490
P S +E K VH FVA D +HP+ I++K EI ++K IGY D+ +VL ++++
Sbjct: 627 PGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEED 686
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
+E L VHSEKLA+A+ L+ I I KN+RVC DCH K SKV REIIVRD N
Sbjct: 687 KEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRN 746
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF DG CSC D+W
Sbjct: 747 RFHHFEDGECSCLDFW 762
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 194/404 (48%), Gaps = 28/404 (6%)
Query: 2 CTHLKKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
C L+ LK+ VHA I+ S F+ + L+ + L A+ +F +
Sbjct: 106 CKTLRHLKQ---VHAQIITHHNSPFQLSALASLSALSPFPTF--LAYAKTIFHHLQNPPP 160
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+ +LI S + P A+ L+ ML+ GLKP+ T V+KA + FG VH
Sbjct: 161 SLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVT-WFGLLVHT 219
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+K G++ + Y+ SSL+ +YA + A LF +++ VSWNA+I G+ + E
Sbjct: 220 HVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGH 279
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A F M+ S++++ A G +++ K + + + LV++ N+++
Sbjct: 280 ARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPER--NLVSW--NSMLA 331
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+ K G++EDA +F+ + RDVVSWNSML AQ G + F++M G+ P + T
Sbjct: 332 GFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEAT 391
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ +L+AC+H G LD+G + + +E VD+ + G + A + M
Sbjct: 392 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 451
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFE------LDPHD 396
+ A W ++ +H NV+ A+++F+ ++P+D
Sbjct: 452 SKDVLA-WNTIIAGMAIHGNVK----EAQQLFKEMKEAGVEPND 490
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL L + +H +I + + + + +++ YAKCG + A ++F+ M KD++ W
Sbjct: 399 CAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 458
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G + + + A LF +M G++PN T ++L A D+ + +
Sbjct: 459 NTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSS 518
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG 169
YG + V ++D+ AR +++A L + N + AL+ G
Sbjct: 519 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGG 567
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/569 (37%), Positives = 334/569 (58%), Gaps = 11/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L R +HA I+ + ++ + + N IL Y KCG +++ + F M +++V+W
Sbjct: 43 CGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMKRRNIVSW 102
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+IS Y+QND+ +AI++F +ML G++P+ T +SVL A AG ++ + VH L
Sbjct: 103 NAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAF-AGPELHRWAKLVHDLAL 161
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ + V ++LL+MY++ +D A +F L K+ VSW+ +IA +A+ G +AL
Sbjct: 162 EVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHGTEALE 221
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M EG + ++ +V A + + +H +I++G + +G L++MY
Sbjct: 222 MFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLGTALLNMYG 281
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + +A+K+F++L +RDVV W+++L A+HG + ++ F M + G+ PN VTF+
Sbjct: 282 KCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVTFVG 341
Query: 302 VLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC H G + EG+ +FA L++ H + P H +D+LGRAG L+ A FI MP++
Sbjct: 342 VLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFIARMPVK 401
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A W LG+CR + ++E G AAE++FE PH ++ LA++Y AG +A
Sbjct: 402 EEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDAGMPEEAEAVA 461
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M+ KKEP S + + VH F HPQ I+ E+ + ++GYVPD+
Sbjct: 462 RLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDELHARALELGYVPDTR 521
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTP--PGSTIHIKKNIRVCGDCHSAFKFASK 538
+L + ++ ++HSE+LALAF +S P S IHI KN+RVC DCH KF S+
Sbjct: 522 PLLLGSVER------KLHSERLALAFGAMSVPGKRNSPIHIIKNLRVCRDCHEFTKFVSR 575
Query: 539 VVE-REIIVRDTNRFHHFRDGFCSCGDYW 566
+E REIIVRDT+RFH F+DG CSCGDYW
Sbjct: 576 TMEGREIIVRDTSRFHLFKDGVCSCGDYW 604
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + A + +L G+ +HA ++ +G Q V F+ N ++ MY K G +ED + F+ +
Sbjct: 36 YLDLLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMK 95
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R++VSWN++++ AQ+ + F +ML +GI P+ VTF VL A + L +
Sbjct: 96 RRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKL 155
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
L + G +++ + G +DRA + E+ I+ + W ++ A
Sbjct: 156 VHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVS-WSNMIAA 209
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 317/560 (56%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ +HA L + + ++L YA+CG L A+++FDEMP V+WTALI+
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y A+ + G++P+ FT VL A A D G V + G
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC-ARVADLATGETVWRAAEQEGIAQ 252
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+V ++ +D+Y + +M A +F + K+ V+W A++ G+A +AL F M
Sbjct: 253 SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQ 312
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P ++ + +A G+L+ G+ V +G L+DMYAK GS
Sbjct: 313 AEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTA 372
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ K+D++ WN+M+ G G K +M ++G+ N TF+ +L +C+
Sbjct: 373 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 432
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+ +G+ YF M K + + P HY VDLL RAGLL A + I +MP+ A +
Sbjct: 433 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL 492
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLG C++H+N EL + ++ L+P +SG +++L+NIY++ GR DAA+ R MKE
Sbjct: 493 GALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEK 552
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
GV+K PACSWVE + VH F D +HP I+KK E+ ++K +GY P + V+
Sbjct: 553 GVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDV 612
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ +E+E L HSEKLA+AF L+ T PG TI + KN+RVC DCH+A K S++ REIIV
Sbjct: 613 EDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIV 672
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH FRDG CSC DYW
Sbjct: 673 RDNNRFHCFRDGSCSCNDYW 692
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 1/281 (0%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+ T LK++ + G Q+HA LK N +V +SLL +YAR + A
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + + VSW ALI + + +A+ G P F+ V TA A
Sbjct: 174 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 233
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L G+ V + G FV VD+Y K G + A +VF+++ +D V+W +M+
Sbjct: 234 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 293
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
G A +G + + F M G+ P+ L+AC+ G LD G+ ++
Sbjct: 294 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 353
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+D+ + G A ++M + VW A++
Sbjct: 354 NPVLGTALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 393
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 311/541 (57%), Gaps = 37/541 (6%)
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAF 119
ALI ++ + +P+ A+ L++ ++R GL P TL S+LK+ S A + VHA
Sbjct: 58 ALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAH 117
Query: 120 CLKYGYDWNVYVGSSLLDMYA--------------------------------RFDQMDD 147
++ G + V ++L+ ++A R ++ D
Sbjct: 118 AVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVAD 177
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + +N VSW+A++ G+ + +G +AL FS+M +G P V A A
Sbjct: 178 ARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQ 237
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+LEQGKWVH ++ + ++ F+G LVDMYAK G ++ +VF + ++V++W +M
Sbjct: 238 LGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTM 297
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHG 326
+ G A HG G ++ F +M +G+ P+ + F+ L AC+H GL+D+G+ F +++ +G
Sbjct: 298 IKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYG 357
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
++P+ HY VDLL R GLL A + +MP++P A +WGAL+ CR HKNVEL Y
Sbjct: 358 IKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVI 417
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+ EL+P SG ++LL NIY+++GR A R +M+E GV+K P CS VE K +H F
Sbjct: 418 KHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQF 477
Query: 447 VANDDAHPQRAMIHKKWREISEKIK-QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
+ D +HP+ I KW EI +I+ + GYVPD VL +++E E+ L HSEKLA+A
Sbjct: 478 IVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIA 537
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
FALIST I I KN+RVC DCH K SKV REIIVRD RFH F+DG CSC DY
Sbjct: 538 FALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDY 597
Query: 566 W 566
W
Sbjct: 598 W 598
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 146/268 (54%), Gaps = 8/268 (2%)
Query: 12 RIVHAHIL-GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R+ AH+L ++ D + NT++ A+A+ G + +AR LFDEMP ++ V+W+A+++GY Q
Sbjct: 143 RLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQ 202
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNV 129
A+ +FSQM G++P+ L VL A GA + G+ VH + V
Sbjct: 203 AGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQ--GKWVHGYLKANNIRMTV 260
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
++G++L+DMYA+ ++ +F ++ KN ++W +I G A G +L FS+M
Sbjct: 261 FLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESS 320
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIE 247
G +P ++ A TG +++G+ + ++ + G + G +VD+ A++G +
Sbjct: 321 GVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYG-CMVDLLARNGLLS 379
Query: 248 DAEKVFNRL-LKRDVVSWNSMLTGCAQH 274
+A + ++ +K D + W +++ GC H
Sbjct: 380 EARDMVEKMPMKPDALIWGALMAGCRFH 407
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L++ + VH ++ + + + + +++ YAKCG + ++F+ M K+++ W
Sbjct: 235 CAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAW 294
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G + + + +++ LFSQM G+KP+ L A DK ++
Sbjct: 295 TTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVN 354
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAG 169
YG + ++D+ AR + +A + + K + + W AL+AG
Sbjct: 355 NYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAG 403
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/526 (39%), Positives = 305/526 (57%), Gaps = 2/526 (0%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ ++ N + Y K G L ARKLFDEMP +++ TW A+++G + E ++ F
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 229
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M R G+ P++F L SV + AG D GRQVHA+ ++ G D ++ VGSSL MY R
Sbjct: 230 MRREGMHPDEFGLGSVFRCC-AGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 288
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ + + L S + VS N +IAG + + E AL F M G ++ S +
Sbjct: 289 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 348
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
+ + +L QG+ +H V+K+G V V LV MY++ G + D+E+VF D
Sbjct: 349 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 408
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
++M++ HG G+ + F++M+ G P+ VTFL +L ACSH+GL +EG F LM
Sbjct: 409 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 468
Query: 324 K-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K +G++P HY VDLLGR+G LD A I MP+ P +W LL AC+ KN ++
Sbjct: 469 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 528
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A+R+ ELDPHDS ++LL+NI A++ R D + RK M+++ V+KEP SWVE K
Sbjct: 529 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 588
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+H F D++HP++ I + E+ KI+Q GY PD S VL + +E+E L HSEKL
Sbjct: 589 IHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKL 648
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
A+AFA +S P G I + KN+RVC DCH A K S+V REI+VRD
Sbjct: 649 AIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRD 694
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 3/272 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ + R VHA+++ S D+ + +++ + Y +CGCL E + +P +V+
Sbjct: 249 CAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSC 308
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+I+G +QN E A+ F M +G+ + T S + + A + G+Q+H +
Sbjct: 309 NTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQ-GQQIHGQVM 367
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G D V V + L+ MY+R + D+ +F + +A+I+ + G+KA+
Sbjct: 368 KAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIE 427
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT-LVDMY 240
F +M+ G EP+ ++ ++ A + +G E+G + K+ G + T +VD+
Sbjct: 428 LFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLL 487
Query: 241 AKSGSIEDAEK-VFNRLLKRDVVSWNSMLTGC 271
+SG +++AE + + L D V W ++L+ C
Sbjct: 488 GRSGCLDEAEALILSMPLTPDGVIWKTLLSAC 519
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 328/556 (58%), Gaps = 7/556 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ F DI+++ I N Y KCG LD A ++M K V T L+ GY+Q +
Sbjct: 202 IHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAAR 261
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A++LFS+M+ G++ + F S +LKA A D G+Q+H++C+K G + V VG+
Sbjct: 262 NRDALLLFSKMISEGVELDGFVFSIILKACAA-LGDLYTGKQIHSYCIKLGLESEVSVGT 320
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D Y + + + A F ++ N+ SW+ALIAG+ + + ++AL F + +G
Sbjct: 321 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLL 380
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDMYAKSGSIEDAEK 251
F Y+++F A ++ L G +HA IK G LVA++ + ++ MY+K G ++ A +
Sbjct: 381 NSFIYNNIFQACSAVSDLICGAQIHADAIKKG--LVAYLSGESAMITMYSKCGKVDYAHQ 438
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
F + K D V+W +++ A HG +R F++M +G+ PN VTF+ +L ACSH+GL
Sbjct: 439 AFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGL 498
Query: 312 LDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ EG+ + ++ K+GV P HY +D+ RAGLL AL+ IR MP EP W +LL
Sbjct: 499 VKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLL 558
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
G C +N+E+G AA+ IF LDP DS ++++ N+YA AG+ ++AA+ RKMM E ++K
Sbjct: 559 GGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRK 618
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
E +CSW+ K VH FV D HPQ I+ K +E++ K+ G + + D E
Sbjct: 619 EVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKK-GEERLLNEENALCDFTE 677
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
R+ +L HSE+LA+A+ LI T + I + KN R C DCH K S V RE++VRD N
Sbjct: 678 RKDQLLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGN 737
Query: 551 RFHHFRDGFCSCGDYW 566
RFHH G CSC DYW
Sbjct: 738 RFHHINSGECSCRDYW 753
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 175/375 (46%), Gaps = 3/375 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + ++ H + A N + N IL Y C A + FD++ +D+ +W
Sbjct: 90 CGTLGALSDGKLFHNRLQRMANSNKF-IDNCILQMYCDCKSFTAAERFFDKIVDRDLSSW 148
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+IS Y++ + + A+ LF +ML LG+ PN F++ S L S A + G+Q+H+ +
Sbjct: 149 ATIISAYTEEGRIDEAVGLFLRMLDLGIIPN-FSIFSTLIMSFADPSMLDLGKQIHSQLI 207
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + ++ + + + +MY + +D A + K+ V+ L+ G+ + + AL
Sbjct: 208 RIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALL 267
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+M+ EG E F +S + A A+ G L GK +H++ IK G + VG LVD Y
Sbjct: 268 LFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYV 327
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K E A + F + + + SW++++ G Q G + F+ + G+ N +
Sbjct: 328 KCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNN 387
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+ ACS L G A K G+ + + + + G +D A + + +P
Sbjct: 388 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAID-KP 446
Query: 362 TAAVWGALLGACRMH 376
W A++ A H
Sbjct: 447 DTVAWTAIICAHAYH 461
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L +HA + ++ ++ ++ Y+KCG +D A + F + D V W
Sbjct: 392 CSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAW 451
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I ++ + + A+ LF +M G++PN T +L A + + + +
Sbjct: 452 TAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTD 511
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG 169
KYG + + + ++D+Y+R + +A + ++ + +V SW +L+ G
Sbjct: 512 KYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/565 (38%), Positives = 328/565 (58%), Gaps = 39/565 (6%)
Query: 36 AYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFT 95
AYA G + + LF + D+ +TA I+ S N + A +L+ Q+L + PN+FT
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM 145
SS+LK+ K G+ +H LK+G + YV + L+D+YA+ FD+M
Sbjct: 131 FSSILKSCST-----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRM 185
Query: 146 DD---------------------AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ A LF + ++ VSWN +I G+++ AL F
Sbjct: 186 PERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQ 245
Query: 185 EMLREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
++L +G +P + + +A + G+LE G+W+H V S +L V L+DMY+K
Sbjct: 246 KLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKC 305
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCV 302
GS+E+A VFN ++D+V+WN+M+TG A HG + +R F++M G+ P +TF+
Sbjct: 306 GSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGT 365
Query: 303 LTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
L AC+HAGL++EG F M +++G++P+ HY V LLGRAG L RA + I+ M +E
Sbjct: 366 LQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEA 425
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARK 421
+ +W ++LG+C++H LG AE + + +SG ++LL+NIYA G A+ R
Sbjct: 426 DSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRN 485
Query: 422 MMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSH 481
+MKE G+ KEP S +E N VH F A D H + I+ R++SE+IK GYVP+++
Sbjct: 486 LMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNT 545
Query: 482 VLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVE 541
VL ++ E+E LQVHSE+LA+A+ LIST PGS + I KN+RVC DCH+ K SK+
Sbjct: 546 VLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITG 605
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
R+I++RD NRFHHF DG CSC D+W
Sbjct: 606 RKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 18/264 (6%)
Query: 33 ILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG-LKP 91
++ YAK G ++ AR LFD M +D+V+W +I GYSQ+ P +A++LF ++L G KP
Sbjct: 196 MITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKP 255
Query: 92 NQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
++ T+ + L A S GA + GR +H F NV V ++L+DMY++ +++A
Sbjct: 256 DEITVVAALSACSQIGALET--GRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVL 313
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR-EGFEPTHFSYSSVFTALASTG 209
+F K+ V+WNA+I G+A + ALR F EM G +PT ++ A A G
Sbjct: 314 VFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAG 373
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNT-----LVDMYAKSGSIEDA-EKVFNRLLKRDVVS 263
+ +G + +S GQ LV + ++G ++ A E + N ++ D V
Sbjct: 374 LVNEG----IQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVL 429
Query: 264 WNSMLTGCAQHG---LGKATVRWF 284
W+S+L C HG LGK +
Sbjct: 430 WSSVLGSCKLHGEFMLGKEIAEYL 453
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L+ R +H + S + ++ + +++ Y+KCG L+EA +F++ P KD+V W
Sbjct: 267 CSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAW 326
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
A+I+GY+ + ++A+ LF +M + GL+P T L+A ++ + +
Sbjct: 327 NAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMG 386
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIA 168
+YG + L+ + R Q+ A+ + + + + V W++++
Sbjct: 387 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLG 435
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/571 (38%), Positives = 338/571 (59%), Gaps = 6/571 (1%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C L+ L + VH + D ++ N ++ Y CG E+ ++F+ M D+V+
Sbjct: 485 SCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVS 544
Query: 61 WTALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
W +++ + P ++ +FS M+R GL PN+ T ++L A + + G+QVHA
Sbjct: 545 WNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLE-LGKQVHAV 603
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE-VSWNALIAGHARKSEGEK 178
LK+G + V ++L+ YA+ MD LF+++ + + VSWN++I+G+ ++
Sbjct: 604 VLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQE 663
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+ M+ ++S V A AS +LE+G +HA I+S + V + L+D
Sbjct: 664 TMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLD 723
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY+K G I+ A KVFN + +++ SWNSM++G A+HGLG+ + FE+M RNG P+ VT
Sbjct: 724 MYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVT 783
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
F+ VL+ACSHAGL+D G YF +M+ HG+ P HY +DLLGRAG L + ++I MP
Sbjct: 784 FVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMP 843
Query: 359 IEPTAAVWGALLGACRMHKN---VELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
++P +W +L ACR K+ ++LG A+ + EL+P + ++L +N YA+ GR D
Sbjct: 844 MKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWED 903
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
A+AR M + +KKE SWV + VH F+A D +HP I++K + +KIK GY
Sbjct: 904 TAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGY 963
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VP + L +++ +E L HSEKLA+AF L + I I KN+RVCGDCH+AF++
Sbjct: 964 VPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRY 1023
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S++V R+II+RD+ RFHHF DG CSCGDYW
Sbjct: 1024 ISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 188/369 (50%), Gaps = 13/369 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKC--GCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
VH + + + ++ + N +++ Y C G +A+++FD PV+D++TW AL+S Y++
Sbjct: 184 VHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKK 243
Query: 72 DQPENAIILFSQMLR----LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+ LF ML + L+PN+ T S++ A+ + QV A LK G
Sbjct: 244 GYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSS 303
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++YVGS+L+ +AR +D+A +F L+ +N V+ N LI G ++ E+A+ F
Sbjct: 304 DLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT- 362
Query: 188 REGFEPTHFSYSSVFTALAS----TGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAK 242
R+ F ++ + +A+A L +G+ VH H++++G L + N LV+MYAK
Sbjct: 363 RDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAK 422
Query: 243 SGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV 302
G+I+ A +VF L RD VSWN++++ Q+G + + + M + I+P+ +
Sbjct: 423 CGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISG 482
Query: 303 LTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPT 362
L++C+ LL GQ K G++ + + V + G G + + M E
Sbjct: 483 LSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHD 541
Query: 363 AAVWGALLG 371
W +++G
Sbjct: 542 IVSWNSIMG 550
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 182/362 (50%), Gaps = 6/362 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
V A +L S +D+ + + +++A+A+ G LDEA+ +F + ++ VT LI G +
Sbjct: 292 VFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHC 351
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDK---FGRQVHAFCLKYGY-DWNV 129
E A+ +F R N T +L A + + GR+VH L+ G D +
Sbjct: 352 SEEAVGIFMGT-RDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKI 410
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ + L++MYA+ +D A +F L +++ VSWN +I+ + E A+ + M +
Sbjct: 411 ALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQG 470
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
P++F+ S ++ AS L G+ VH +K G L V N LV MY G+ ++
Sbjct: 471 CISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSES 530
Query: 250 EKVFNRLLKRDVVSWNSML-TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
++FN + + D+VSWNS++ + H +V F M+R+G+ PN+VTF+ +L+A S
Sbjct: 531 WEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSP 590
Query: 309 AGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
+L+ G+ A++ KHG + A + ++G +D + M A W +
Sbjct: 591 LSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNS 650
Query: 369 LL 370
++
Sbjct: 651 MI 652
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 175/361 (48%), Gaps = 23/361 (6%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H ++ +D+ + N ++N YAK L AR++FD M ++ V+WT L+SGY +
Sbjct: 78 LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137
Query: 74 PENAIILFSQMLRLG---LKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNV 129
+ A +F ML G +P FT SVL+A AG F QVH K Y N
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197
Query: 130 YVGSSLLDMYAR--FDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
V ++L+ MY A +F ++ ++WNAL++ +A+K F ML
Sbjct: 198 TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257
Query: 188 REG----FEPTHFSYSSVFTALA----STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
+ P ++ S+ TA + S+G L+Q V A V+KSG +VG+ LV
Sbjct: 258 HDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQ---VFARVLKSGSSSDLYVGSALVSA 314
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
+A+ G +++A+ +F L +R+ V+ N ++ G + + V F R+ N TF
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT-RDSFVVNTDTF 373
Query: 300 LCVLTACSHAGLLDEG-----QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
+ +L+A + + ++G + + +++ ++ + A V++ + G +D+A +
Sbjct: 374 VVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVF 433
Query: 355 R 355
R
Sbjct: 434 R 434
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 19/290 (6%)
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
++H +K G ++++ + L+++YA+ ++ A +F + +N VSW L++G+
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 175 EGEKALRTFSEMLREGFE---PTHFSYSSVFTALASTGS--LEQGKWVHAHVIKSGGQLV 229
++A R F ML EG E PT F++ SV A G L VH V K+
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196
Query: 230 AFVGNTLVDMYAKS--GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
V N L+ MY G A++VF+ RD+++WN++++ A+ G +T F M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256
Query: 288 LRNGIA----PNQVTFLCVLTACS----HAGLLDEGQGYFALMKKHGVEPEEAHYVTFVD 339
L + A PN+ TF ++TA S +G+LD+ FA + K G + V
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQ---VFARVLKSGSSSDLYVGSALVS 313
Query: 340 LLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVE-LGAYAAER 388
R G+LD A + + G ++G + H + E +G + R
Sbjct: 314 AFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTR 363
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 317/560 (56%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ +HA L + + ++L YA+CG L A+++FDEMP V+WTALI+
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y A+ + G++P+ FT VL A A D G V + G
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC-ARVADLATGETVWRAAEQEGIAQ 205
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+V ++ +D+Y + +M A +F + K+ V+W A++ G+A +AL F M
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQ 265
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG P ++ + +A G+L+ G+ V +G L+DMYAK GS
Sbjct: 266 AEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTA 325
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ K+D++ WN+M+ G G K +M ++G+ N TF+ +L +C+
Sbjct: 326 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCT 385
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+ +G+ YF M K + + P HY VDLL RAGLL A + I +MP+ A +
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVIL 445
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLG C++H+N EL + ++ L+P +SG +++L+NIY++ GR DAA+ R MKE
Sbjct: 446 GALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEK 505
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
GV+K PACSWVE + VH F D +HP I+KK E+ ++K +GY P + V+
Sbjct: 506 GVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDV 565
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ +E+E L HSEKLA+AF L+ T PG TI + KN+RVC DCH+A K S++ REIIV
Sbjct: 566 EDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIV 625
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH FRDG CSC DYW
Sbjct: 626 RDNNRFHCFRDGSCSCNDYW 645
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 1/281 (0%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+ T LK++ + G Q+HA LK N +V +SLL +YAR + A
Sbjct: 67 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + + VSW ALI + + +A+ G P F+ V TA A
Sbjct: 127 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 186
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L G+ V + G FV VD+Y K G + A +VF+++ +D V+W +M+
Sbjct: 187 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 246
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
G A +G + + F M G+ P+ L+AC+ G LD G+ ++
Sbjct: 247 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+D+ + G A ++M + VW A++
Sbjct: 307 NPVLGTALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 346
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 323/526 (61%), Gaps = 7/526 (1%)
Query: 46 ARKLFD--EMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKA 102
A K+F E P+ ++ W LI GY++ +A L+ +M GL +P+ T ++KA
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 103 SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS 162
A D + G +H+ ++ G+ +YV +SLL +YA + A+ +F + K+ V+
Sbjct: 131 VTTMA-DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 163 WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVI 222
WN++I G A + E+AL ++EM +G +P F+ S+ +A A G+L GK VH ++I
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 223 KSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVR 282
K G N L+D+YA+ G +E+A+ +F+ ++ ++ VSW S++ G A +G GK +
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 283 WFEKMLRN-GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDL 340
F+ M G+ P ++TF+ +L ACSH G++ EG YF M++ + +EP H+ VDL
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 341 LGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH 400
L RAG + +A ++I+ MP++P +W LLGAC +H + +L +A +I +L+P+ SG +
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 401 ILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIH 460
+LL+N+YAS R +D + RK M GVKK P S VE N VH F+ D +HPQ I+
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY 489
Query: 461 KKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK 520
K +E++ +++ GYVP S+V +++E+E + HSEK+A+AF LISTP S I +
Sbjct: 490 AKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVV 549
Query: 521 KNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
KN+RVC DCH A K SKV REI+VRD +RFHHF++G CSC DYW
Sbjct: 550 KNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 164/278 (58%), Gaps = 8/278 (2%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T + ++ +H+ ++ S F + I +QN++L+ YA CG + A K+FD+MP KD+V W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCL 121
++I+G+++N +PE A+ L+++M G+KP+ FT+ S+L A + GA G++VH + +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL--TLGKRVHVYMI 249
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G N++ + LLD+YAR ++++A LF + KN VSW +LI G A G++A+
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 182 TFSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVD 238
F M EG P ++ + A + G +++G + + ++ ++ + + +VD
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 239 MYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG 275
+ A++G ++ A E + + ++ +VV W ++L C HG
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 114 RQVHAFCLKYGYDW-NVYVGSSLLDMYARFDQ---MDDAWFLFTALESK-NEVSWNALIA 168
RQ+HAF +++G + +G L+ M A +F+ +E N WN LI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 169 GHARKSEGEKALRTFSEMLREGF-EPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
G+A A + EM G EP +Y + A+ + + G+ +H+ VI+SG
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
+ +V N+L+ +YA G + A KVF+++ ++D+V+WNS++ G A++G + + + +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL 347
GI P+ T + +L+AC+ G L G+ M K G+ +DL R G +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 348 DRALKFIREMPIEPTAAVWGALL 370
+ A EM ++ + W +L+
Sbjct: 274 EEAKTLFDEM-VDKNSVSWTSLI 295
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + VH +++ ++ N +L+ YA+CG ++EA+ LFDEM K+ V+W
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKA-SGAGATDDKFG--RQVH 117
T+LI G + N + AI LF M GL P + T +L A S G + F R++
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALIAGHARKSEG 176
+Y + + ++D+ AR Q+ A+ ++ + N V W L+ A G
Sbjct: 352 E---EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG--ACTVHG 406
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW-----VHAHVIKSGGQLVAF 231
+ L F+ + EP H S + L++ + EQ +W + +++ G + V
Sbjct: 407 DSDLAEFARIQILQLEPNH---SGDYVLLSNMYASEQ-RWSDVQKIRKQMLRDGVKKVP- 461
Query: 232 VGNTLVDM 239
G++LV++
Sbjct: 462 -GHSLVEV 468
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 334/577 (57%), Gaps = 16/577 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDMV 59
C+ +++ R++H+ I S F++++ + N ++ Y +CG ++EARK+FD M ++D+V
Sbjct: 170 CSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 229
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++S Y ND+ ++AI L+ R+ L+P++ T S+L A + A D GR +H
Sbjct: 230 SWNIMLSTYVHNDRGKDAIQLYQ---RMQLRPDKVTYVSLLSACSS-AEDVGLGRVLHKQ 285
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ + NV VG++L+ MYA+ +A +F +E ++ +SW +I+ + R+ +A
Sbjct: 286 IVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEA 345
Query: 180 LRTFSEMLR-------EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
F +ML + +P ++ ++ A A +LEQGK V G V
Sbjct: 346 CHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAV 405
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
G +V++Y K G IE+A ++F+ + R DV WN+M+ AQ G ++ F +M G
Sbjct: 406 GTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG 465
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK--HGVEPEEAHYVTFVDLLGRAGLLDR 349
+ P+ +F+ +L ACSH GL D+G+ YF M V H+ DLLGR G L
Sbjct: 466 VRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKE 525
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A +F+ ++P++P A W +LL ACR H++++ A ++ L+P + ++ L+NIYA
Sbjct: 526 AEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAE 585
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
+ + A+ RK M E GVKKE S +E +H F DDAHP+ I ++ ++ +
Sbjct: 586 LQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQ 645
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
+K+ GYVPD+ VL + D+QE+E L HSE+LA+A LISTP G+ + + KN+RVC DC
Sbjct: 646 MKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDC 705
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+A K SK+ R+I+VRD RFH F+DG CSC DYW
Sbjct: 706 HTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 193/380 (50%), Gaps = 14/380 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP-VKDMVT 60
C + L++ +H ++ S + D + N +LN Y KCG L A+++F +M +++++
Sbjct: 68 CGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVIS 127
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+ + ++ + A+ F ML LG+K + + ++L A + A GR +H+
Sbjct: 128 WSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD-GRMIHSCI 186
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALES--KNEVSWNALIAGHARKSEGEK 178
G++ + V ++++ MY R +++A +F A++ ++ VSWN +++ + G+
Sbjct: 187 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKD 246
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
A++ + M P +Y S+ +A +S + G+ +H ++ + VGN LV
Sbjct: 247 AIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVS 303
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML---RNG---- 291
MYAK GS +A VF+++ +R ++SW ++++ + L F++ML +NG
Sbjct: 304 MYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQR 363
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+ P+ + F+ +L AC+ L++G+ G+ ++A V+L G+ G ++ A
Sbjct: 364 VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEAR 423
Query: 352 KFIREMPIEPTAAVWGALLG 371
+ + P +W A++
Sbjct: 424 RIFDAVCSRPDVQLWNAMIA 443
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 201/420 (47%), Gaps = 17/420 (4%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
YA C +A+ FD + +++ +WT L++ ++ + Q + + +M + G++P+ T
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+ L + G + G ++H + + + V ++LL+MY + + A +F +E
Sbjct: 62 ITALGSCG-DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 157 -SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGK 215
++N +SW+ + HA +ALR F ML G + T + ++ +A +S ++ G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 216 WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQ 273
+H+ + SG + V N ++ MY + G++E+A KVF+ + + RDVVSWN ML+
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 274 HGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH 333
+ GK ++ +++M + P++VT++ +L+ACS A E G ++ K V E
Sbjct: 241 NDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSA----EDVGLGRVLHKQIVNDELEK 293
Query: 334 YV----TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI 389
V V + + G A +M + + W ++ A + V + +++
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQM 352
Query: 390 FELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
EL+ + S + + A LN A + + V ++ A + + AV V N
Sbjct: 353 LELEKNGSSQRV-KPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVN 411
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 7/224 (3%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MYA D DA F ALE +N SW L+A A + ++ LR M ++G P +
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 198 YSSVFTALASTG---SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN 254
+ TAL S G SL G +H V+ S ++ V N L++MY K GS+ A++VF
Sbjct: 61 F---ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 117
Query: 255 RLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
++ + R+V+SW+ M A HG +R F ML GI + + +L+ACS L+
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177
Query: 314 EGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
+G+ + + G E E + + GR G ++ A K M
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAM 221
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/595 (36%), Positives = 336/595 (56%), Gaps = 38/595 (6%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYA--KCGCLDEARKLFDEMPVKDMVTWTALI 65
LKE + +H ++ + N+ + + + A L + ++ D+ + ++I
Sbjct: 22 LKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALNSMI 81
Query: 66 SGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
YS++ P + ++++L+ + P+ +T + +++ A + G VH +K+
Sbjct: 82 RAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSACEA--GPAVHGALIKH 139
Query: 124 GYDWNVYVGSSLLDMYARFDQMD----------------------------DAWF---LF 152
G++++ +V S L+ MYA + D F LF
Sbjct: 140 GFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLF 199
Query: 153 TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLE 212
++ ++ VSWNA+IAG+A++ + +AL F M +G + S SV TA G+L+
Sbjct: 200 DSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALD 259
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
QGKW HA++ K+ Q+ +G LVDMY K G+++ A KVF + +++V +W++ + G A
Sbjct: 260 QGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLA 319
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEE 331
+G G+ + F M GIAPN++TF+ VL CS G +DEG+ +F MK+ HG+EP
Sbjct: 320 MNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRL 379
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
HY VDL GRAG L+ AL FI MP++P A WGALL ACRM+KN+ELG +A+ ++ E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
++ + G ++ L+NIYA G + + R+ MK G+ K P CS +E VH F + D
Sbjct: 440 VEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDK 499
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
+HP +I W EIS+++K GYV ++ VL +++E+E L HSEK+A+AF L S
Sbjct: 500 SHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSL 559
Query: 512 PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
G I I KN+R+C DCH K SK+ EREIIVRD NRFHHF+DG CSC D+W
Sbjct: 560 KEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 8/216 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTHL L + + HA+I + + + + +++ Y KCG +D A K+F EM K++ TW
Sbjct: 252 CTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTW 311
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ I G + N + + LFS M G+ PN+ T SVLK D+ +
Sbjct: 312 STAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKR 371
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG---HARKSEGE 177
+G + + ++D+Y R ++++A + K +W AL+ + GE
Sbjct: 372 DHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGE 431
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
A R E+ EG H +Y S+ A TG+ ++
Sbjct: 432 FASRKLIEV--EG--KNHGAYVSLSNIYADTGNWDR 463
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 322/544 (59%), Gaps = 4/544 (0%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ + ++NAY KCG LD AR LFD + V+D W A+IS ++Q + A+ L QM
Sbjct: 36 DVIVATAVMNAYGKCGDLDSARGLFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMR 95
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD-MYARFDQ 144
G+ P++ T + L A + D G ++HAF + G D + V ++L++ MYAR
Sbjct: 96 LDGVTPSKGTCVAALNAC-CHSRDFSEGLRIHAFARELGGDADTVVQTALVNIMYARLGS 154
Query: 145 MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
++DA +F A+ ++N +SW A++ H++ +ALR F +L EG P ++++V A
Sbjct: 155 LEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVTPNDVTFTAVLNA 214
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ S+ K V A + ++G V N L+ K GS+E+ K F + ++ VSW
Sbjct: 215 SGNLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSW 274
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK- 323
NS + AQHG G V F+ M GI VT + VL++CSHAGL+ +G YF M
Sbjct: 275 NSAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHV 334
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI-EPTAAVWGALLGACRMHKNVELG 382
+G+ E HY +DLL RAG L+ A +F++ +P + + W LL C++H ++E G
Sbjct: 335 DYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLERG 394
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
A +RI L+P +GP++++ N+YA AG+ +AA RK M + G KKEP SW+E K
Sbjct: 395 GRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVDLGPKKEPGLSWIEVKGR 454
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKL 502
+H F D +HP+ + IH++ +++K+K+ G+V D+ V+ +E+E+ L HSEKL
Sbjct: 455 IHEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTKAVVYDLQAKEKESLLCQHSEKL 514
Query: 503 ALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSC 562
A+AF LIST G + I KN+RVC DCHSA KF S +V REI+VRD RFHHFR G CSC
Sbjct: 515 AIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSC 574
Query: 563 GDYW 566
D+W
Sbjct: 575 EDFW 578
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-QLVAFVGNTLVDMYAKSGSIEDAEK 251
P +Y ++ L + G + + A V G +L V +++ Y K G ++ A
Sbjct: 2 PNDVTYVAI---LGACGHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSARG 58
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
+F+R+L RD WN+M++ H G + +M +G+ P++ T + L AC H+
Sbjct: 59 LFDRILVRDAAVWNAMISLLVVHEQGDEALELCRQMRLDGVTPSKGTCVAALNACCHSRD 118
Query: 312 LDEGQGYFALMKKHGVEPEEAHYVTFVDLL-GRAGLLDRALKFIREMPIEPTAAVWGALL 370
EG A ++ G + + V+++ R G L+ A + M + W A++
Sbjct: 119 FSEGLRIHAFARELGGDADTVVQTALVNIMYARLGSLEDAREIFDAMTTRNVIS-WTAMV 177
Query: 371 GACRMHKNVELGAYAAERIF 390
G +H + L A RIF
Sbjct: 178 G---VHSQLGLNREAL-RIF 193
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 14/225 (6%)
Query: 4 HLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
+L ++ A++V A + + F ++ + N +L A KCG L+E K F MPV++ V+W +
Sbjct: 217 NLASIRAAKLVQACLSETGFLGNVEVANGLLCALGKCGSLEEVAKFFRVMPVQNQVSWNS 276
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQVHAFC 120
I+ +Q+ + LF M G+ TL VL + +G A + +H
Sbjct: 277 AIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMH--- 333
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEK 178
+ YG S ++D+ +R ++ A L +E W L+ G + E+
Sbjct: 334 VDYGLPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDESVFPWITLLCGCKLHGDLER 393
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
R +L G P V L + GKW A ++
Sbjct: 394 GGRATQRIL--GLNPGSTGPYLVMHNLYAGA----GKWPEAAAVR 432
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/582 (36%), Positives = 332/582 (57%), Gaps = 37/582 (6%)
Query: 20 GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMVTWTALISGYSQNDQPENA 77
G +N IA N+++ + + GC+++AR++F+ + +DMV+W+A++S Y QN+ E A
Sbjct: 196 GMPERNTIA-SNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEA 254
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV------ 131
++LF +M G+ ++ + S L A + + + GR VH +K G + V +
Sbjct: 255 LVLFVEMKGSGVAVDEVVVVSALSAC-SRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIH 313
Query: 132 -----------------GSSLLDM---------YARFDQMDDAWFLFTALESKNEVSWNA 165
G LLD+ Y R + DA LF ++ K+ VSW+A
Sbjct: 314 LYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSA 373
Query: 166 LIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG 225
+I+G+A+ +AL F EM G P + S +A +L+ GKW+HA++ ++
Sbjct: 374 MISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNK 433
Query: 226 GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFE 285
Q+ + TL+DMY K G +E+A +VF + ++ V +WN+++ G A +G + ++ F
Sbjct: 434 LQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFA 493
Query: 286 KMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRA 344
M + G PN++TF+ VL AC H GL+++G+ YF +++ +H +E HY VDLLGRA
Sbjct: 494 DMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRA 553
Query: 345 GLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLA 404
GLL A + I MP+ P A WGALLGACR H++ E+G ++ +L P G H+LL+
Sbjct: 554 GLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLS 613
Query: 405 NIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWR 464
NIYAS G + R +M + GV K P CS +E VH F+A D HPQ I
Sbjct: 614 NIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLD 673
Query: 465 EISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIR 524
++ K+K GYVP +S V D++E+E L HSEKLA+AF LI+ P + I + KN+R
Sbjct: 674 VVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLR 733
Query: 525 VCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+C DCH+ K SK +R+I+VRD +RFHHF+ G CSC D+W
Sbjct: 734 ICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 218/503 (43%), Gaps = 111/503 (22%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
E R +HAH + S F D+ ++NT++N YA CG + AR++F+E PV D+V+W L++GY
Sbjct: 123 EGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYV 182
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
Q + E A +F M P + T++S
Sbjct: 183 QAGEVEEAERVFEGM------PERNTIAS------------------------------- 205
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEML 187
+S++ ++ R ++ A +F + + VSW+A+++ + + GE+AL F EM
Sbjct: 206 ---NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMK 262
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK------------------------ 223
G S +A + ++E G+WVH +K
Sbjct: 263 GSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIV 322
Query: 224 -------SGGQLVAFVG-NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG 275
GG+L+ + N+++ Y + GSI+DAE +F + ++DVVSW++M++G AQH
Sbjct: 323 DARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHE 382
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
+ F++M +G+ P++ + ++AC+H LD G+ A + ++ ++
Sbjct: 383 CFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILST 442
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
T +D+ + G ++ AL+ M E + W A++ M+ +VE
Sbjct: 443 TLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVILGLAMNGSVEQS------------- 488
Query: 396 DSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQ 455
N++A + M G AC HM + ND H
Sbjct: 489 --------LNMFADMKKTGTVPNEITFMGVLG-----ACR--------HMGLVNDGRHYF 527
Query: 456 RAMIHKKWREISEKIKQIGYVPD 478
+MIH+ +I IK G + D
Sbjct: 528 NSMIHE--HKIEANIKHYGCMVD 548
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 173/341 (50%), Gaps = 45/341 (13%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--------- 52
C+ + ++ R VH + ++ ++++N +++ Y+ CG + +AR++FD+
Sbjct: 280 CSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLIS 339
Query: 53 -----------------------MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGL 89
MP KD+V+W+A+ISGY+Q++ A+ LF +M G+
Sbjct: 340 WNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGV 399
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+P++ L S + A AT D G+ +HA+ + NV + ++L+DMY + +++A
Sbjct: 400 RPDETALVSAISACTHLATLD-LGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENAL 458
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F A+E K +WNA+I G A E++L F++M + G P ++ V A G
Sbjct: 459 EVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMG 518
Query: 210 SLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVS 263
+ G+ +H H I++ + G +VD+ ++G +++AE++ + + + DV +
Sbjct: 519 LVNDGRHYFNSMIHEHKIEAN---IKHYG-CMVDLLGRAGLLKEAEELIDSMPMAPDVAT 574
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
W ++L C +H + R K+++ + P+ F +L+
Sbjct: 575 WGALLGACRKHRDNEMGERLGRKLIQ--LQPDHDGFHVLLS 613
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 19/277 (6%)
Query: 151 LFTALESKNEVSWNALIAGHAR-KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F L + N +WN ++ H ++ +AL + L +P ++Y + A+
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARV 119
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
S +G+ +HAH + SG +V NTL+++YA GS+ A +VF D+VSWN++L
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179
Query: 270 GCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
G Q G + R FE M RN IA N + L G +++ + F ++ G E
Sbjct: 180 GYVQAGEVEEAERVFEGMPERNTIASNSMIAL-----FGRKGCVEKARRIFNGVR--GRE 232
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELGAYA 385
+ + V + + + AL EM + V + L AC NVE+G +
Sbjct: 233 RDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWV 292
Query: 386 AERIFELDPHDSGPHILLAN----IYASAGRLNDAAR 418
++ D ++ L N +Y+S G + DA R
Sbjct: 293 HGLAVKVGVED---YVSLKNALIHLYSSCGEIVDARR 326
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 17/236 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CTHL L + +HA+I + + ++ + T+++ Y KCGC++ A ++F M K + TW
Sbjct: 413 CTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTW 472
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKAS-GAGATDDK---FGRQVH 117
A+I G + N E ++ +F+ M + G PN+ T VL A G +D F +H
Sbjct: 473 NAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIH 532
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAGHARKSEG 176
++ + N+ ++D+ R + +A L ++ +V +W AL+ + +
Sbjct: 533 ----EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDN 588
Query: 177 EKALRTFSEMLREGFEPTHFSY----SSVFTALASTGSLEQGKWVHAH--VIKSGG 226
E R ++++ +P H + S+++ + + G++ + + + A V+K+ G
Sbjct: 589 EMGERLGRKLIQ--LQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPG 642
>gi|115453917|ref|NP_001050559.1| Os03g0582100 [Oryza sativa Japonica Group]
gi|113549030|dbj|BAF12473.1| Os03g0582100 [Oryza sativa Japonica Group]
Length = 629
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 313/541 (57%), Gaps = 25/541 (4%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ +L+ YA C D ARK+FD MP ++ VTW ALI GY+Q + E AI+LF M R G
Sbjct: 111 LATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREG 170
Query: 89 --LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
+ P+++T ++L GR+ + G +L+ +YA ++
Sbjct: 171 SHVAPDRYTFPALLSG---------IGREGGS-------------GRTLVSLYAARRTLE 208
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
DA F + S + + W+++I+ + E E AL F ML + +PT F YS+VF+
Sbjct: 209 DAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCG 268
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
G LE GK VHAH +KS + A + N L+ MY+ G I DA+KVF+ +V+S+NS
Sbjct: 269 RMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNS 328
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG-QGYFALMKKH 325
M++ QHG K + F +M G+ P++VT L ++++ +HAGL+ EG Q + +++
Sbjct: 329 MISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIE 388
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYA 385
G++P HY VD+L R+G + +A+K I EMP E A +W +LGAC H+++E G
Sbjct: 389 GIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRI 448
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHM 445
AE +FE++P+++ +ILL NIYA GR +A + R +M E GV K+ A SW+E +
Sbjct: 449 AEMLFEMEPYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYR 508
Query: 446 FVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
F +D +HP I++ + IK GYVPD S + +E L H EKLA A
Sbjct: 509 FGVDDRSHPISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFA 568
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
F ++ P G T+ I KN+RVCGDCH A+K+ S V REII+RD RFHHF GFCSCGDY
Sbjct: 569 FGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDY 628
Query: 566 W 566
W
Sbjct: 629 W 629
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 32/277 (11%)
Query: 87 LGLKPNQFTLSSVLKASGAGATDDK------FGRQVHAFCLKYGY---DWNVYVGSSLLD 137
L P S++LKA+ + A+ + G Q+HA + G+ D + + +++L
Sbjct: 58 LADDPTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLS 117
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG--FEPTH 195
YA + D A +F + +N V+WNALI G+A+ E+A+ F +M REG P
Sbjct: 118 FYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDR 177
Query: 196 FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNR 255
+++ ++ + + + GG G TLV +YA ++EDA+ F++
Sbjct: 178 YTFPALLSGIG----------------REGGS-----GRTLVSLYAARRTLEDAKVAFDQ 216
Query: 256 LLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEG 315
+ D + W+SM++ + + F ML I P Q + V + C G+L+ G
Sbjct: 217 VGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMG 276
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK 352
+ A K E + A + + + G ++ A K
Sbjct: 277 KQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQK 313
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ + VHAH L S + D AM N +L Y+ CGC+++A+K+F +++++
Sbjct: 267 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 326
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD---KFGRQVH 117
++IS Q+ P+ A+ F QM GL P++ TL +++ + + AG + F V
Sbjct: 327 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVD 386
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+K Y V +DM AR ++ A + + E ++ G K
Sbjct: 387 IEGIKPMYQHYACV----VDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDI 442
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKS 224
+ + +EML E EP Y + L G+W A ++S
Sbjct: 443 ETGKRIAEMLFE-MEP----YEATNYILLGNIYARLGRWTEAEKVRS 484
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 339/606 (55%), Gaps = 45/606 (7%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTIL---NAYAKCGCLDEARKLFDEMPVKD 57
+C+ L + KE VHA I + + +L A R LF ++ +
Sbjct: 17 RCSSLNQAKE---VHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPN 73
Query: 58 MVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
WTALI Y+ A+ +S M + + P FT S++ A A G Q+H
Sbjct: 74 PFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAA-VRHSALGAQLH 132
Query: 118 AFCLKYG-YDWNVYVGSSLLDMYAR----------FDQMDD----AWF------------ 150
A L G + ++YV ++++DMY + FD+M + +W
Sbjct: 133 AQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDM 192
Query: 151 -----LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
LF L K+ V+W A++ G+A+ + AL F + EG E + V +A
Sbjct: 193 RAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISAC 252
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVA---FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
A G+ + W+ + +S G V VG+ L+DMY+K G++E+A VF + +R+V
Sbjct: 253 AQLGASKYANWIR-DIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVF 311
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
S++SM+ G A HG +A ++ F ML G+ PN VTF+ VLTACSHAGL+D+GQ FA M
Sbjct: 312 SYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASM 371
Query: 323 KK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+K +GV P Y DLL RAG L++AL+ + MP+E AVWGALLGA +H N ++
Sbjct: 372 EKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDV 431
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
A++R+FEL+P + G ++LL+N YASAGR +D ++ RK+++E +KK P SWVE KN
Sbjct: 432 AEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKN 491
Query: 442 A-VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
+H FVA D +HP+ I K+ ++ E++K IGY P+ S + + +E+ L HSE
Sbjct: 492 GMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSE 551
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
KLALAF L+ST GSTI I KN+R+C DCH ASKV R+I+VRD RFHHF +G C
Sbjct: 552 KLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTRFHHFLNGAC 611
Query: 561 SCGDYW 566
SC ++W
Sbjct: 612 SCSNFW 617
>gi|302800503|ref|XP_002982009.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
gi|300150451|gb|EFJ17102.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
Length = 604
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 334/569 (58%), Gaps = 11/569 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R +HA I+ + ++ + + N IL Y KCG +++ + F EM +++V+W
Sbjct: 43 CGRSRNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSEMKRRNIVSW 102
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+IS Y+QND+ +AI++F +ML G++P+ T +SVL A AG ++ + VH L
Sbjct: 103 NAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAF-AGPELHRWAKLVHDLAL 161
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ + V ++LL+MY++ +D A +F L K+ VSW+ +IA +A+ G +AL
Sbjct: 162 EVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHGTEALE 221
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M EG + ++ +V A + + +H +I++G + +G L++MY
Sbjct: 222 MFHRMDAEGIQANVITFVAVVHACVLVARITDARTIHRRIIEAGLESNTVLGTALLNMYG 281
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + +A+K+F++L +RDVV W+++L A+HG + ++ F M + G+ PN VTF+
Sbjct: 282 KCGGLPEAKKIFDKLTERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVTFVG 341
Query: 302 VLTACSHAGLLDEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
VL AC H G + EG+ +FA L++ H + P H +D+LGRAG L+ A FI MP++
Sbjct: 342 VLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFIARMPVK 401
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
A W LG+CR + ++E G AAE++FE PH ++ LA++Y AG +A
Sbjct: 402 EEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDAGMPEEAEAVA 461
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
++M+ KKEP S + + VH F HPQ I+ + + ++GYVPD+
Sbjct: 462 RLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDVLHARALELGYVPDTR 521
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTP--PGSTIHIKKNIRVCGDCHSAFKFASK 538
+L + ++ ++HSE+LALAF +S P S IHI KN+RVC DCH KF S+
Sbjct: 522 PLLLGSVER------KLHSERLALAFGAMSVPGKRNSPIHIIKNLRVCRDCHEFTKFVSR 575
Query: 539 VVE-REIIVRDTNRFHHFRDGFCSCGDYW 566
+E REIIVRDT+RFH F+DG CSCGDYW
Sbjct: 576 TMEGREIIVRDTSRFHLFKDGVCSCGDYW 604
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 8/236 (3%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
Y + A + +L G+ +HA ++ +G Q V F+ N ++ MY K G +ED + F+ +
Sbjct: 36 YLDLLLACGRSRNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSEMK 95
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R++VSWN++++ AQ+ + F +ML +GI P+ VTF VL A + L +
Sbjct: 96 RRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKL 155
Query: 318 YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
L + G +++ + G +DRA + E+ I+ + W ++ A +
Sbjct: 156 VHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVS-WSNMIAA---YA 211
Query: 378 NVELGAYAAERIFELDPHDSGPHIL--LANIYAS--AGRLNDAARARKMMKESGVK 429
G A E +D +++ +A ++A R+ DA + + E+G++
Sbjct: 212 QTGHGTEALEMFHRMDAEGIQANVITFVAVVHACVLVARITDARTIHRRIIEAGLE 267
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 330/546 (60%), Gaps = 13/546 (2%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
K++IA + ++++ K G +DEAR++FDEM + ++TWT +++GY QN++ ++A +F
Sbjct: 170 KDNIA-RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M + + + +S+L + +K V ++++ +
Sbjct: 229 MP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK-----PVIACNAMISGLGQKG 279
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
++ A +F +++ +N+ SW +I H R +AL F M ++G PT + S+ +
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
AS SL GK VHA +++ + +V + L+ MY K G + ++ +F+R +D++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 264 WNSMLTGCAQHGLGKATVRWFEKM-LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM 322
WNS+++G A HGLG+ ++ F +M L PN+VTF+ L+ACS+AG+++EG + M
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 323 KK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVEL 381
+ GV+P AHY VD+LGRAG + A++ I M +EP AAVWG+LLGACR H +++
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 382 GAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKN 441
+ A+++ E++P +SG +ILL+N+YAS GR D A RK+MK V+K P CSW E +N
Sbjct: 520 AEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVEN 579
Query: 442 AVHMFV-ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSE 500
VH F ++HP++ I K E+ +++ GY PD S+ L D++E+ L+ HSE
Sbjct: 580 KVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSE 639
Query: 501 KLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFC 560
+LA+A+AL+ G I + KN+RVC DCH+A K SKV EREII+RD NRFHHFR+G C
Sbjct: 640 RLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGEC 699
Query: 561 SCGDYW 566
SC DYW
Sbjct: 700 SCKDYW 705
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 172/395 (43%), Gaps = 45/395 (11%)
Query: 31 NTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
N + ++ G + EARKLFD K + +W ++++GY N P +A LF +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 91 PNQFTLSSVLKASG---AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
P++ +S SG G D+ R+V + NV ++L+ Y ++D
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDE--ARKVFDLMPER----NVVSWTALVKGYVHNGKVDV 128
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A LF + KN+VSW ++ G + + A + + EM+ + + + +S+ L
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIP---DKDNIARTSMIHGLCK 184
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G +++ + + + T+V Y ++ ++DA K+F+ + ++ VSW SM
Sbjct: 185 EGRVDEAR----EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM 240
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC--VLTACSHAGLLDEGQGYFALMKKH 325
L G Q+G + FE M P + C +++ G + + + F MK
Sbjct: 241 LMGYVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK-- 292
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALK---FIREMPIEPTAAVWGALLGAC----RMHKN 378
E +A + T + + R G AL +++ + PT ++L C +H
Sbjct: 293 --ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 379 VELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
++ A F++D + + +L +Y G L
Sbjct: 351 KQVHAQLVRCQFDVDVYVAS---VLMTMYIKCGEL 382
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 14/220 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + VHA ++ F D+ + + ++ Y KCG L +++ +FD P KD++ W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 62 TALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++ISGY+ + E A+ +F +M L KPN+ T + L A ++ + +
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEG 176
+G + ++DM R + ++A + ++ + + + W +L+ H++
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
E + E+ E T+ S+++ + QG+W
Sbjct: 521 EFCAKKLIEIEPEN-SGTYILLSNMYAS--------QGRW 551
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/572 (36%), Positives = 325/572 (56%), Gaps = 20/572 (3%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
++A I+ + D + +L + + A K+F ++ +TALI G +
Sbjct: 51 IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+ I L+ QM+ L P+ + ++SVLKA G K GR+VH+ LK G N +
Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLAL-KEGREVHSQVLKLGLSSNRSIRI 169
Query: 134 SLLDMYARFDQMDDAWFLFTALES------------------KNEVSWNALIAGHARKSE 175
L+++Y + +DA +F + K+ V W A+I G R E
Sbjct: 170 KLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGE 229
Query: 176 GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT 235
+AL F M RE P + V +A + G+L+ G+WV +++ K +L FVG
Sbjct: 230 SNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGA 289
Query: 236 LVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPN 295
L++MY++ G I++A++VF ++ +++V+++NSM+ G A HG V F +++ G P+
Sbjct: 290 LINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPS 349
Query: 296 QVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFI 354
VTF+ VL ACSH GL + G + + ++ K +G+EP+ HY VDLLGR G L+ A FI
Sbjct: 350 SVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFI 409
Query: 355 REMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLN 414
R M + P + GALL AC++H N+EL A+ + DSG +ILL+N Y+S+G+
Sbjct: 410 RMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWK 469
Query: 415 DAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG 474
+AA R M+E G++KEP CS +E N +H F+ D HPQ+ I+KK E+++ ++ G
Sbjct: 470 EAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEG 529
Query: 475 YVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFK 534
Y P + VL ++ E+E L +HSE+LA+ + LIST P +T+ + KN+RVC DCH K
Sbjct: 530 YTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIK 589
Query: 535 FASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
S + R+I+VRD NRFHHF +G CSCGDYW
Sbjct: 590 LISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 178/350 (50%), Gaps = 36/350 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP------------- 54
LKE R VH+ +L ++ +++ ++ Y KCG ++AR++FDEMP
Sbjct: 146 LKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINY 205
Query: 55 -----VKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGAT 108
+KD V WTA+I G +N + A+ +F M R + PN+ T+ VL A S GA
Sbjct: 206 YFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGAL 265
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIA 168
+ GR V ++ K+ + N +VG +L++MY+R +D+A +F ++ KN +++N++I
Sbjct: 266 --QLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIM 323
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGG-- 226
G A + +A+ F ++++GF P+ ++ V A + G E G + + K G
Sbjct: 324 GFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIE 383
Query: 227 -QLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRW 283
Q+ + +VD+ + G +E+A F R++K D V ++L+ C HG +
Sbjct: 384 PQIEHY--GCMVDLLGRLGRLEEAYS-FIRMMKVAPDHVMLGALLSACKIHG----NLEL 436
Query: 284 FEKMLRNGIAPNQV---TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPE 330
E++ ++ +A T++ + A S +G E M++ G+E E
Sbjct: 437 AERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKE 486
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R V +++ + + + ++N Y++CG +DEA+++F++M K+++T+
Sbjct: 259 CSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITY 318
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++I G++ + + A+ LF +++ G P+ T VL A G + H+
Sbjct: 319 NSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAK 378
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
YG + + ++D+ R ++++A+ F+ + + V AL++
Sbjct: 379 DYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSA 427
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 327/565 (57%), Gaps = 14/565 (2%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
+ L R +HAH++ + ++ +++ I+N Y KCG L A+++FD+M VK V T L+
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
GY+Q + +A+ LF ++ G++ + F S VLKA A + G+Q+HA K G
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC-ASLEELNLGKQIHACVAKLGL 316
Query: 126 DWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSE 185
+ V VG+ L+D Y + + A F + N+VSW+A+I+G+ + S+ E+A++TF
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 186 MLREGFEPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
+ + + F+Y+S+F A + G VHA IK + + L+ MY+K G
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
++DA +VF + D+V+W + ++G A +G +R FEKM+ G+ PN VTF+ VLT
Sbjct: 437 CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACSHAGL+++G+ +++K+ V P HY +D+ R+GLLD ALKF++ MP EP A
Sbjct: 497 ACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDA 556
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
W L C HKN+ELG A E + +LDP D+ ++L N+Y AG+ +AA K+M
Sbjct: 557 MSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLM 616
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
E +KKE +CSW++ K +H F+ D HPQ I++K +E G++ +
Sbjct: 617 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GFMEGD---M 667
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIK--KNIRVCGDCHSAFKFASKVVE 541
+ ER +L HSE+LA+AF LIS + IK KN+R C DCH K S V
Sbjct: 668 FQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTG 727
Query: 542 REIIVRDTNRFHHFRDGFCSCGDYW 566
EI++RD+ RFHHF++G CSC DYW
Sbjct: 728 HEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 209/465 (44%), Gaps = 50/465 (10%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L+ L R++H + + +QN +L Y +C L++A KLFDEM + V+
Sbjct: 93 CRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSR 152
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +IS Y++ + A+ LFS ML G KP +++LK+ D FGRQ+HA +
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALD-FGRQIHAHVI 211
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G N + + +++MY + + A +F + K V+ L+ G+ + AL+
Sbjct: 212 RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALK 271
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +++ EG E F +S V A AS L GK +HA V K G + VG LVD Y
Sbjct: 272 LFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFL 300
K S E A + F + + + VSW+++++G Q + V+ F+ + +N N T+
Sbjct: 332 KCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYT 391
Query: 301 CVLTACS-----------HA------------------------GLLDEGQGYFALMKKH 325
+ ACS HA G LD+ F M
Sbjct: 392 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN- 450
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP---IEPTAAVWGALLGACRMHKNVELG 382
P+ + F+ G AL+ +M ++P + + A+L AC VE G
Sbjct: 451 ---PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 383 AYAAERIFELDPHDSGPHI----LLANIYASAGRLNDAARARKMM 423
+ + + L ++ P I + +IYA +G L++A + K M
Sbjct: 508 KHCLDTM--LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 326/561 (58%), Gaps = 15/561 (2%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
++ +AR ++ + G D+ ++ + G +DEAR++FDEM ++++TWT +I+
Sbjct: 156 RIDDARKLYDMMPG----KDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMIT 211
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY QN + + A LF M + + + +S+L + +K
Sbjct: 212 GYGQNKRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK---- 263
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
V ++++ ++ A +F +E ++ +W +I + RK +AL F++M
Sbjct: 264 -PVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQM 322
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
R+G P+ S S+ + A+ SL+ G+ VHAH+++ +V + L+ MY K G +
Sbjct: 323 QRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGEL 382
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
A+ VF+R +D++ WNS+++G A HGLG+ ++ F +M +G PN+VT + +LTAC
Sbjct: 383 VKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTAC 442
Query: 307 SHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
S+ G L+EG F M+ K V P HY VD+LGRAG +D+A++ I M I+P A V
Sbjct: 443 SYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATV 502
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGALLGAC+ H ++L AA+++FE++P ++GP+ILL++I AS + D A RK M+
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRT 562
Query: 426 SGVKKEPACSWVETKNAVHMFV-ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLS 484
V K P CSW+E VHMF HP++AMI + +++ GY PD SHVL
Sbjct: 563 KNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLH 622
Query: 485 YADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
D++E+ L HSE+LA+A+ L+ P G I + KN+RVCGDCH+A K SKV EREI
Sbjct: 623 DVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREI 682
Query: 545 IVRDTNRFHHFRDGFCSCGDY 565
I+RD NRFHHF +G CSC DY
Sbjct: 683 ILRDANRFHHFNNGECSCRDY 703
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 138/297 (46%), Gaps = 25/297 (8%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ +I N +++ Y K ++EAR +F+ MP +++V+WTA++ GY Q A +LF +
Sbjct: 76 ERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWR 135
Query: 84 MLRLGLKPNQFTLSSVLKASG---AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
M P + +S + G G DD R+++ + G D V ++++
Sbjct: 136 M------PERNEVSWTVMFGGLIDGGRIDD--ARKLYD--MMPGKD--VVASTNMIGGLC 183
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
R ++D+A +F + +N ++W +I G+ + + A + F M E T S++S
Sbjct: 184 REGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMP----EKTEVSWTS 239
Query: 201 VFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR 259
+ +G +E ++ +K N ++ + G I A +VF+++ R
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKP-----VIACNAMIVALGEVGEIVKARRVFDQMEDR 294
Query: 260 DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
D +W M+ + G + F +M R G+ P+ + + +L+ C+ L G+
Sbjct: 295 DNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGR 351
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VHAH++ F D+ + + ++ Y KCG L +A+ +FD P KD++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMW 400
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISGY+ + E A+ +F +M G PN+ TL ++L A G ++ +
Sbjct: 401 NSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMES 460
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARKSEGE 177
K+ V S +DM R ++D A L ++ K + + W AL+ H+R E
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 178 KALRTFSEMLREGFEP 193
A + E+ E P
Sbjct: 521 VAAKKLFEIEPENAGP 536
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 155/356 (43%), Gaps = 58/356 (16%)
Query: 18 ILGSAFKNDIAMQNTI-LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPEN 76
IL A+ + N+ ++ ++ G ++EARK FD + K + +W +++SGY N P
Sbjct: 7 ILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPRE 66
Query: 77 AIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLL 136
A +F +M P + +S WN L+
Sbjct: 67 ARQMFDEM------PERNIVS-----------------------------WN-----GLV 86
Query: 137 DMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHF 196
Y + +++A +F + +N VSW A++ G+ ++ +A F M E
Sbjct: 87 SGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP----ERNEV 142
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL 256
S++ +F L G ++ + ++ + G +VA ++ + G +++A ++F+ +
Sbjct: 143 SWTVMFGGLIDGGRIDDARKLYD--MMPGKDVVA--STNMIGGLCREGRVDEAREIFDEM 198
Query: 257 LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+R+V++W +M+TG Q+ + FE M +V++ +L + +G +++ +
Sbjct: 199 RERNVITWTTMITGYGQNKRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAE 254
Query: 317 GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+F +M V A V LG G + +A + +M + A W ++ A
Sbjct: 255 EFFEVMPMKPVIACNAMIVA----LGEVGEIVKARRVFDQME-DRDNATWRGMIKA 305
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 334/563 (59%), Gaps = 3/563 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIA-MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTA 63
L ++KE R VH ++ A ++ + ++ YA G L + K+F+ + K +++W
Sbjct: 512 LGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNT 571
Query: 64 LISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
LIS +++N QPE A++LF QM GL P+ ++L+S L A G + + G Q+H + +K
Sbjct: 572 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGT-ISFSQLGAQIHGYIIKT 630
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G ++N +V ++L+DMYA+ + A +F ++ K+ V+WN++I G ++ +A+ F
Sbjct: 631 G-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLF 689
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M + ++ SV A + G LE+GKWVH +I G + +++ L DMY+K
Sbjct: 690 DQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 749
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G ++ A VF+R+ +R +VSW+ M+ G HG AT+ F +ML +GI PN +TF+ +L
Sbjct: 750 GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHIL 809
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
+ACSHAG ++EG+ YF M + GVEP+ H+ VDLL RAG L+ A + I +P +
Sbjct: 810 SACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANS 869
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
++WGALL CR+HK +++ + + ++D D+G + LL+NIYA G + + R MM
Sbjct: 870 SIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMM 929
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
K G++K P S +E ++ F D +H Q I++ + Y + + +
Sbjct: 930 KSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSI 989
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ +E + HSEKLA+AF +I+T PG+T+ I KN+RVC DCHS K ASK+ RE
Sbjct: 990 VGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGRE 1049
Query: 544 IIVRDTNRFHHFRDGFCSCGDYW 566
II+RD NRFH FR+G CSC DYW
Sbjct: 1050 IIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 188/419 (44%), Gaps = 55/419 (13%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGY----- 68
+HAH+ + ++ +YA+ G + ++++FD P D W LI Y
Sbjct: 367 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 426
Query: 69 ----------------------------------------SQNDQPENAIILFSQMLRLG 88
+N Q + +FSQM+
Sbjct: 427 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEA 486
Query: 89 LKPNQFTLSSVLKASGAGAT-------DDKFGRQVHAFCLKYGYDWNV-YVGSSLLDMYA 140
++P+ T+ SV +A + K GR VH F ++ D + ++G +L+++YA
Sbjct: 487 VEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 546
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
+ D +F ++ K +SWN LI+ R + E+AL F +M +G P +S +S
Sbjct: 547 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 606
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+A + + G +H ++IK+ G FV N L+DMYAK G + A K+F ++ ++
Sbjct: 607 SLSACGTISFSQLGAQIHGYIIKT-GNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKS 665
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+V+WNSM+ G +Q+G + F++M N + +++TFL V+ ACSH G L++G+
Sbjct: 666 LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 725
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
+ +G+ + D+ + G L A M E + W ++ MH +
Sbjct: 726 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHGQI 783
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+HL L++ + VH ++ + D + + + Y+KCG L A +FD M + +V+W
Sbjct: 711 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSW 770
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
+ +I+GY + Q I LF+QML G+KPN T +L A S AGA ++ G+
Sbjct: 771 SVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEE--GKLYFNSM 828
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG 169
++G + + ++D+ +R ++ A+ + T+L N W AL+ G
Sbjct: 829 SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG 878
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 51/283 (18%)
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A++ +L Q +HAH+ +G L++ YA+ G E +++VF+ K D W
Sbjct: 359 ATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWG 415
Query: 266 SMLTGCAQHGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLL---------DEG 315
++ G + V + +M+ ++ + F VL ACS G L EG
Sbjct: 416 VLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEG 475
Query: 316 QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRM 375
F+ M VEP+ ++ + G +L+ R LG +
Sbjct: 476 LDMFSQMISEAVEPDSVTMLSVTEACSELG----SLRLGR--------------LGRVKE 517
Query: 376 HKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACS 435
++V + R + + GP ++ +YA G L D + + +KE + S
Sbjct: 518 GRSVH--GFVIRRAMDPELDFLGPALM--ELYADTGNLRDCHKVFETIKEKTI-----LS 568
Query: 436 WVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
W + +F N P+ A++ + +++ G +PD
Sbjct: 569 W---NTLISIFTRN--GQPEEALL------LFVQMQTQGLMPD 600
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 336/543 (61%), Gaps = 8/543 (1%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDE----MPVKDMVTWTALISGYSQNDQPENAIIL 80
N+ ++ ++ ++ CG +DEAR++F++ + + + V W A+ GYS+N P+ A++L
Sbjct: 106 NNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESV-WVAMGIGYSRNGYPKEALLL 164
Query: 81 FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
+ +M+ + F S LKA + D + GR VHA LK D + V ++LL +Y+
Sbjct: 165 YYEMVCQFGQLGNFAFSMALKAC-SDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYS 223
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
++A +F + +N VSWN+LIAG +K +A+ F M +G + + ++
Sbjct: 224 EDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTT 283
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ A +L GK +HA ++KS + A V N+LVDMYAK G+++ +VFN + +D
Sbjct: 284 ILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKD 343
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
+ SWN+++TG A +G + F++M+ +G +P+ +TF+ +L+ CSHAGL D+G F
Sbjct: 344 LTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFE 403
Query: 321 LMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNV 379
+MK HG+ P HY VD+LGRAG + AL+ ++ MP +PT ++WG+LL +CR+H NV
Sbjct: 404 MMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNV 463
Query: 380 ELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVET 439
L A+R+FEL+P+++G +++L+NIYA+AG R+ M++ G+ KE CSW++
Sbjct: 464 PLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQI 523
Query: 440 KNAVHMFVANDDAHPQRAMIHKK-WREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVH 498
K+ +H FVA + ++ +KK W+ + E ++++GYVPD+ VL ++ R + H
Sbjct: 524 KSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGH 583
Query: 499 SEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDG 558
SE+LA FALI+T G I I KN+RVC DCHS K SKV R I++RDTNRFHHF+DG
Sbjct: 584 SERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDG 643
Query: 559 FCS 561
CS
Sbjct: 644 VCS 646
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 164/336 (48%), Gaps = 14/336 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R VHA +L + D + N +L Y++ GC +EA ++FD MP +++V+W
Sbjct: 187 CSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSW 246
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI+G + + AI F M G+ + TL+++L A T G+++HA +
Sbjct: 247 NSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVC-ARVTALGSGKEIHAVIV 305
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K + V +SL+DMYA+ MD +F ++ K+ SWN LI G+A +A+
Sbjct: 306 KSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAME 365
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMY 240
+F EM+ GF P ++ ++ + + G + G + + G LVD+
Sbjct: 366 SFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVL 425
Query: 241 AKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG---LGKATV-RWFEKMLRNGIAPN 295
++G I++A E V N K W S+L C HG L +A R FE + PN
Sbjct: 426 GRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFE------LEPN 479
Query: 296 QVTFLCVLTAC-SHAGLLDEGQGYFALMKKHGVEPE 330
+L+ ++AG+ + + M+K G+ E
Sbjct: 480 NAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKE 515
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 502 LALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
LA FALI+T G I I KN+ VC DCHS K SK
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSK 736
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 331/553 (59%), Gaps = 7/553 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H++++ +A+ +I++ N+++ Y G EA +F M +D+V+WT +ISG N
Sbjct: 258 LHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLL 317
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P+ A+ + M G P++ T++SVL A + D G ++H + G+ V V +
Sbjct: 318 PDKALETYKTMEITGTMPDEVTIASVLSACASLGQLD-MGMKLHELAERTGHILYVVVAN 376
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+DMY++ +++ A +F + K+ +SW ++I G + +AL F +M+ + +P
Sbjct: 377 SLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KP 435
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ S +A A G+L GK +HAH +K+G F+ N ++D+Y + G + A F
Sbjct: 436 NSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF 495
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
N L ++DV +WN +LTG AQ G G + F++M+ + I P+ VTF+ +L ACS +G++
Sbjct: 496 N-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVT 554
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG YF MK + + P HY VDLLGRAG L+ A +FI MPI+P A+WGALL A
Sbjct: 555 EGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNA 614
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H++V LG AA+ IF+ D G +ILL N+YA +G+ ++ A+ R+ MKE G+ +P
Sbjct: 615 CRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDP 674
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CSWVE K VH F++ D+ HPQ I+ EK+K G+ + S Q +
Sbjct: 675 GCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGF--NGQECSSMDGIQTSK 732
Query: 493 AKLQV-HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNR 551
A + HSE+ A+A++LI++ PG I + KN+ +C CHS KF SK+V REI VRDT +
Sbjct: 733 ADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQ 792
Query: 552 FHHFRDGFCSCGD 564
FHHF+DG CSCGD
Sbjct: 793 FHHFKDGLCSCGD 805
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 198/383 (51%), Gaps = 15/383 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKN-DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
C + + E V +L S + + N +L+ + + G + A +F M +D+ +
Sbjct: 43 CENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFS 102
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W L+ GY++ + A+ L+ ++L G++P+ +T SVL+ S AGA D GR+VHA
Sbjct: 103 WNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLR-SCAGAMDLVRGREVHAHV 161
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+++ +D +V V ++L+ MY + + A LF + +++ +SWNA+I+G+ E + L
Sbjct: 162 VRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGL 221
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F M +P + +SV +A G G +H++V+++ V N+L+ MY
Sbjct: 222 ELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMY 281
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
G ++AE VF+ + RDVVSW ++++GC + L + ++ M G P++VT
Sbjct: 282 LSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIA 341
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAH--YV----TFVDLLGRAGLLDRALKFI 354
VL+AC+ G LD G MK H + H YV + +D+ + +++AL+
Sbjct: 342 SVLSACASLGQLDMG------MKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIF 395
Query: 355 REMPIEPTAAVWGALLGACRMHK 377
++P + W +++ R++
Sbjct: 396 HQIP-DKDVISWTSVINGLRINN 417
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + +HAH L + D + N IL+ Y +CG + A F+ + KD+ W
Sbjct: 447 CARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAW 505
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
L++GY+Q + + LF +M+ + P+ T S+L A + +
Sbjct: 506 NILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKV 565
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALI 167
Y N+ + ++D+ R ++++A + K + + W AL+
Sbjct: 566 NYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/571 (37%), Positives = 326/571 (57%), Gaps = 7/571 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-----PVK 56
C H ++ E H + +++++++ Y+KC +D A ++ +
Sbjct: 131 CAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDN 190
Query: 57 DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQV 116
D + ++++ ++ + A+ + +M+ G+ + T SV+ G D G QV
Sbjct: 191 DAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQ-IRDLGLGLQV 249
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEG 176
HA LK G ++V+VGS L+DM+ + + A +F L+++N V W +L+ + + E
Sbjct: 250 HAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEF 309
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTL 236
E+ L S M REG F+++ + A A +L G +HA V K G + VGN L
Sbjct: 310 EETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNAL 369
Query: 237 VDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
++MY+K G I+ + VF + RD+++WN+M+ G +QHGLGK + F+ ML G PN
Sbjct: 370 INMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNH 429
Query: 297 VTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIR 355
VTF+ VL+AC+H L++EG Y LMK VEP HY V +L RAG+L+ A F+R
Sbjct: 430 VTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMR 489
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLND 415
++ W LL AC +H+N LG AE I ++DP D G + LL+N+YA A +
Sbjct: 490 TTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDS 549
Query: 416 AARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGY 475
RKMM+E VKKEP SW+E +NAVH+F ++ HP+ I+ K + + E IKQ+GY
Sbjct: 550 VTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGY 609
Query: 476 VPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKF 535
VP+ VL + +++E+ L HSEKLA+A+ L+ P + I + KN+R+C DCH+A K
Sbjct: 610 VPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKL 669
Query: 536 ASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
SKV R IIVRD +RFHHFRDG C+C D+W
Sbjct: 670 ISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 7/356 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
+I N+++N Y KC L AR LFDEM ++ +V++ L+ GY + + + LF M+
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+PN++ ++VL A + G Q H F K+G ++ +V SSL+ MY++ +
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFE-GMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV 172
Query: 146 DDAWFLFTA----LESKNEV-SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
D A + + +++ N+ +N+++ +A+ M+ EG +Y S
Sbjct: 173 DLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVS 232
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
V L G VHA ++K G FVG+ LVDM+ K G + A KVF+ L R+
Sbjct: 233 VMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRN 292
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFA 320
VV W S++T Q+G + T+ M R G N+ TF +L A + L G A
Sbjct: 293 VVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHA 352
Query: 321 LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
++K G++ +++ + G +D + +M W A++ H
Sbjct: 353 RVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR-NRDIITWNAMICGYSQH 407
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 105 AGATDDKFGRQVHAFCL-------KYGY-DWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
A + FG+ +H L + Y ++N+ +SL+++Y + ++ A +LF +
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
++ VS+N L+ G+ E + ++ F M+ ++P + +++V +A A +G + +G
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF-----NRLLKRDVVSWNSMLTGC 271
H + K G FV ++LV MY+K ++ A +V N D +NS+L
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202
Query: 272 AQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEE 331
+ G V +M+ G+ + VT++ V+ C L G A + K G+ +
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV 262
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
VD+ G+ G + A K + VW +L+ A
Sbjct: 263 FVGSMLVDMFGKCGDVLSARKVFDGLQ-NRNVVVWTSLMTA 302
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 333/593 (56%), Gaps = 48/593 (8%)
Query: 21 SAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIIL 80
+ F +D+ + + I+ Y K + ARK+FD M +D V W ++SG +N + AI++
Sbjct: 135 AGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILI 194
Query: 81 FSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYA 140
F M++ G+ + T+++VL A D G + +K G+ + YV + L +Y+
Sbjct: 195 FGDMVKGGIGFDSTTVAAVLPGV-AELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYS 253
Query: 141 RFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSS 200
+ +++ A LF + + VS+NA+I+G+ +E E ++R F E+L G + S
Sbjct: 254 KCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVG 313
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRD 260
+ G L + +H KSG + V L +Y++ IE A +F+ ++
Sbjct: 314 LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKS 373
Query: 261 VVSWNSMLTGCAQHGLGKATVRWFEKM--------------------------------- 287
+ SWN+M++G AQ+GL + + F++M
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433
Query: 288 -------------LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAH 333
L + ++P VTFL VL ACSHAGL+ EG F +++ HG EP H
Sbjct: 434 LINRESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEH 493
Query: 334 YVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELD 393
Y VDLLGRAG LD+AL FIR+MP+EP VWGALLGAC +HK+ L A++++FELD
Sbjct: 494 YACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELD 553
Query: 394 PHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAH 453
P + G ++LL+NIY++ +AA R ++K + K P C+ +E N +H+F + D +H
Sbjct: 554 PQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSH 613
Query: 454 PQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPP 513
PQ I+ +++ K+++ G+ ++ L +++E+E ++VHSEKLA+AF LI++ P
Sbjct: 614 PQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEP 673
Query: 514 GSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
G+ I I KN+RVC DCH+A KF SK+ ER I+VRD NRFHHF+DG CSCGDYW
Sbjct: 674 GTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 190/421 (45%), Gaps = 41/421 (9%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
+ L + HA I+ + ND+ + + + +D+A LF +P D+ + L
Sbjct: 20 VSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVL 79
Query: 65 ISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
I +S N+ P +A+ L++ + + L+P+ FT + V+ + + +HA +
Sbjct: 80 IRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLG----LLLHAHSIVA 135
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G+ +++VGS+++ Y +F ++ A +F + ++ V WN +++G + S ++A+ F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 184 SEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
+M++ G + ++V +A L G + +K G A+V L +Y+K
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCV- 302
G IE A +F ++ + D+VS+N+M++G + +++VR F+++L +G N + + +
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 303 ----------LTACSHA---------------------GLLDEGQGYFALMKKHGVEPEE 331
LT C H L+E + L+ E
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESA-RLLFDESSEKSL 374
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREM---PIEPTAAVWGALLGACRMHKNVELGAYAAER 388
A + + + GL ++A+ +EM + P ++L AC + LG + +
Sbjct: 375 ASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDL 434
Query: 389 I 389
I
Sbjct: 435 I 435
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/483 (41%), Positives = 303/483 (62%), Gaps = 6/483 (1%)
Query: 88 GLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++ N+ T +VL + G+ ++ GR+VH+ G + +V VG++L++MY + ++
Sbjct: 5 GVERNKVTYVTVLSGFTTPGSLEE--GRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVE 62
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM--LREGFEPTHFSYSSVFTA 204
+A F + N VSW+A++A +A+ AL + EM R+G P ++ ++ A
Sbjct: 63 EARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDA 122
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
+ G+L +G+ +HA V + G V N LV+ Y + GS+ DA+ VF+ + +RDV+SW
Sbjct: 123 CSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISW 182
Query: 265 NSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMK 323
+SM++ AQ G + + +ML G P+ + F+ VL ACS++G+++ +F +++
Sbjct: 183 SSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG 242
Query: 324 KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGA 383
VEP HY VD+LGRAG L A +R MP P ++ +L AC+++ +VE G
Sbjct: 243 DTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGE 302
Query: 384 YAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAV 443
AAE +FELDP +S P+I LANIY++A R DAAR RK+M+E G+KK+P CSW+E + V
Sbjct: 303 AAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRV 362
Query: 444 HMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
H F+A D HPQR I+ + + + ++K+ GY D+ VL ++ E+E L HSEKLA
Sbjct: 363 HEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLA 422
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+AF LISTPPG+ + I KN+RVC DCH+A K SKV REI+VRDTNRFHHF DG CSC
Sbjct: 423 IAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCN 482
Query: 564 DYW 566
DYW
Sbjct: 483 DYW 485
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 150/279 (53%), Gaps = 27/279 (9%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+E R VH+ + G+ + D+ + ++N Y KC ++EAR F+++ ++V+W+A+++
Sbjct: 26 LEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAA 85
Query: 68 YSQNDQPENAIILFSQM--LRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYG 124
Y+QN A+ L+ +M R G+ PN+ T ++L A S GA + GR++HA + G
Sbjct: 86 YAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAE--GRKIHAAVAERG 143
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+D ++ V ++L++ Y R + DA +F + ++ +SW+++I+ A++ ++A+ +
Sbjct: 144 FDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYH 203
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT--------- 235
ML EG P + SV A +++G +E SG + VG+T
Sbjct: 204 RMLSEGTLPDDIIFISVLFACSNSGVVEA----------SGDFFRSIVGDTQVEPTLEHY 253
Query: 236 --LVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGC 271
+VD+ ++G + DAE + + + + +ML+ C
Sbjct: 254 ACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSAC 292
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L E R +HA + F D+ + N ++N Y +CG L +A+ +FD M +D+++W
Sbjct: 123 CSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISW 182
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA---SGAGATDDKFGRQV 116
+++IS ++Q + + A+ L+ +ML G P+ SVL A SG F R +
Sbjct: 183 SSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 240
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 319/543 (58%), Gaps = 11/543 (2%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D+ ++ + G +DEAR +FDEM +++VTWT +I+GY QN++ + A LF M
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP 230
Query: 86 RLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+ + + +S+L + +K V ++++ + ++
Sbjct: 231 ----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK-----PVIACNAMIVGFGEVGEI 281
Query: 146 DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL 205
A +F +E ++ +W +I + RK +AL F++M ++G P+ S S+ +
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Query: 206 ASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
A+ SL+ G+ VHAH+++ +V + L+ MY K G + A+ VF+R +D++ WN
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWN 401
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-K 324
S+++G A HGLG+ ++ F +M +G PN+VT + +LTACS+AG L+EG F M+ K
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Query: 325 HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAY 384
V P HY VD+LGRAG +D+A++ I M I+P A VWGALLGAC+ H ++L
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEV 521
Query: 385 AAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVH 444
AA+++FE +P ++G ++LL++I AS + D A RK M+ + V K P CSW+E VH
Sbjct: 522 AAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVH 581
Query: 445 MFV-ANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLA 503
MF HP++AMI + +++ GY PD SHVL D++E+ L HSE+LA
Sbjct: 582 MFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLA 641
Query: 504 LAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCG 563
+A+ L+ P G I + KN+RVCGDCH+A K SKV EREII+RD NRFHHF +G CSC
Sbjct: 642 VAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCR 701
Query: 564 DYW 566
DYW
Sbjct: 702 DYW 704
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 36/339 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+ + + K+ EAR + A I N+I++ Y G EAR+LFDEM +++V+
Sbjct: 26 RLSRIGKINEARKFFDSLQFKA----IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS 81
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVH--- 117
W L+SGY +N A +F M + + ++ G + F R
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 118 -AFCLKYG--------------YDW----NVYVGSSLLDMYARFDQMDDAWFLFTALESK 158
++ + +G YD +V ++++ R ++D+A +F + +
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG-KWV 217
N V+W +I G+ + + + A + F M E T S++S+ +G +E ++
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 218 HAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLG 277
+K N ++ + + G I A +VF+ + RD +W M+ + G
Sbjct: 258 EVMPMKP-----VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 278 KATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
+ F +M + G+ P+ + + +L+ C+ L G+
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 21/230 (9%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ R VHAH++ F +D+ + + ++ Y KCG L +A+ +FD KD++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDK---FGRQVH 117
++ISGY+ + E A+ +F +M G PN+ TL ++L A S AG ++ F
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAG---HARK 173
FC+ V S +DM R Q+D A L ++ K + + W AL+ H+R
Sbjct: 461 KFCVTP----TVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
E A + E EP + + + L+S + + KW V++
Sbjct: 517 DLAEVAAKKLFEN-----EPDN---AGTYVLLSSINA-SRSKWGDVAVVR 557
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 143/340 (42%), Gaps = 59/340 (17%)
Query: 34 LNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQ 93
++ ++ G ++EARK FD + K + +W +++SGY N P+ A LF +M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 94 FTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT 153
+ NV + L+ Y + + +A +F
Sbjct: 75 -------------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 154 ALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQ 213
+ +N VSW A++ G+ ++ +A F M E S++ +F L G +++
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDK 159
Query: 214 GKWVHAHV-IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+ ++ + +K ++ + G +++A +F+ + +R+VV+W +M+TG
Sbjct: 160 ARKLYDMMPVKD-----VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
Q+ + FE M +V++ +L + +G +++ + +F +M V A
Sbjct: 215 QNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
V F G G + +A + M + A W ++ A
Sbjct: 271 MIVGF----GEVGEISKARRVFDLME-DRDNATWRGMIKA 305
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/575 (38%), Positives = 334/575 (58%), Gaps = 19/575 (3%)
Query: 2 CTHLKKLKEARI--VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
C+ L+ +++ H + + +D+ + ++NAYA+CG +D AR+ F MP ++ V
Sbjct: 240 CSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAV 299
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WT++I+ ++Q A+ F ML G+ P + TL + L+ G D R V A
Sbjct: 300 SWTSMIAAFAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALE----GCEDLHTARLVEAI 354
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNA-----LIAGHARKS 174
+ G +V + + L+ YAR D +DA +F+A + E W+A +IA +A+
Sbjct: 355 AQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDAALVTAMIAVYAQCR 411
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV-- 232
+ + + + G P Y + A AS +L +G+ +HA + + +L V
Sbjct: 412 DRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHA-CVAADRRLDRDVTL 470
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
GN +V MY + GS+ DA F+ + RD +SWN+ML+ AQHG + F ML+ G
Sbjct: 471 GNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGF 530
Query: 293 APNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+V FL +L+AC+HAGL++ G +F+ M HGV P HY VDLLGR G L A
Sbjct: 531 DAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAH 590
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAG 411
++ MP+ P AA W AL+GACR++ + E G +AAER+ EL + + ++ L NIY++AG
Sbjct: 591 GIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAG 650
Query: 412 RLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIK 471
R DAA RK+M + G++K P S +E ++ VH FV D +HPQ I+ + + I+
Sbjct: 651 RWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIE 710
Query: 472 QIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHS 531
+ GY + VL +++++E L+ HSEKLA+AF ++STP GST+ + KN+RVC DCH+
Sbjct: 711 RAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHN 770
Query: 532 AFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
A KF SKV REI+VRD RFHHF+DG CSCGDYW
Sbjct: 771 ASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 183/389 (47%), Gaps = 20/389 (5%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK-DMVT 60
C+ + L R++H + + + + +++ Y +CG L +A LF + D+V
Sbjct: 138 CSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVL 197
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF- 119
W A+I+ SQN P A+ +F +ML+LG+ P+ T SV KA ++ QV F
Sbjct: 198 WNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA--CSSSPSLRASQVKGFH 255
Query: 120 -CL-KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
CL + G +V V ++L++ YAR ++D A F A+ +N VSW ++IA A+
Sbjct: 256 TCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGH-L 314
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A+ TF ML EG PT S++F AL L + V A + G + LV
Sbjct: 315 LAVETFHAMLLEGVVPTR---STLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLV 371
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWN-----SMLTGCAQHGLGKATVRWFEKMLRNGI 292
YA+ EDA +VF+ R+ W+ +M+ AQ ++T + + + GI
Sbjct: 372 MAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428
Query: 293 APNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRAL 351
+P+++ ++ L AC+ L EG Q + + ++ + V + G+ G L A
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488
Query: 352 KFIREMPIEPTAAVWGALLGACRMHKNVE 380
MP + W A+L A H VE
Sbjct: 489 DAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 29 MQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
+ ++++ Y +CG L+ A +F ++ K +V WT LIS Y AI LF ++L+ G
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 89 LKPNQFTLSSVLKASGAGATDDKF---GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 145
+ + SVL A + ++F GR +H ++ G V S+L+ MY R +
Sbjct: 124 IALDAIVFVSVLSA----CSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179
Query: 146 DDAWFLFTALESKNEVS-WNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA 204
DA LF LE +V WNA+I +++ +AL F ML+ G P ++ SVF A
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239
Query: 205 LASTGSLE--QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVV 262
+S+ SL Q K H + ++G V LV+ YA+ G I+ A + F + +R+ V
Sbjct: 240 CSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAV 299
Query: 263 SWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
SW SM+ AQ G A V F ML G+ P + T L C
Sbjct: 300 SWTSMIAAFAQIGHLLA-VETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 4/246 (1%)
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
Y+ SSL+ MY R ++ A +F + K+ V W LI+ + + A+ F +L+E
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
G + SV +A +S L G+ +H +++G L V + LV MY + GS+ DA
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 250 EKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSH 308
+F L + DVV WN+M+T +Q+G + + F +ML+ GI P+ VTF+ V ACS
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 309 AGLLDEGQ--GYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+ L Q G+ + + G+ + V+ R G +D A +F MP E A W
Sbjct: 243 SPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMP-ERNAVSW 301
Query: 367 GALLGA 372
+++ A
Sbjct: 302 TSMIAA 307
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 334/600 (55%), Gaps = 41/600 (6%)
Query: 7 KLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKD--MVTWTAL 64
KL + +HA ++ A ++ ++ ++++ Y AR LFD P + W +
Sbjct: 86 KLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVM 145
Query: 65 ISGYSQNDQPENAIILFSQMLRLG----LKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
I YS+ + I LF +ML L + P+++T + V+ S + +G VH
Sbjct: 146 IRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVI-TSCSHQISLIYGEIVHGMV 204
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+K G++ N+YVG+S+++M + F +M+DA +F + ++ SW +L+ G+A+ E ++A
Sbjct: 205 VKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRAC 264
Query: 181 RTFSEM----------LREGF----------------------EPTHFSYSSVFTALAST 208
F+ M + GF P V +A A
Sbjct: 265 ELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHL 324
Query: 209 GSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSML 268
G+L+QG W+H ++ K G + + + L+DMYAK G I+ A +VFN + KRDV+S+ SM+
Sbjct: 325 GALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMI 384
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH-GV 327
+G + HGLGK +R F +ML + PN++T L VL CSH+GL++EG A M+ G+
Sbjct: 385 SGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGI 444
Query: 328 EPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAE 387
P+ HY ++DLLGRAG L+RAL+ ++ MP+EP +W ALL A R+H NV LG
Sbjct: 445 APKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIIS 504
Query: 388 RIFELDPHD-SGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
I +L D +G +LL+N+YAS GR RK+M + + P CSW+E VH F
Sbjct: 505 HIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEF 564
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
D HPQ I K EI +++ QIGY ++ V +++E+E + HSEKLA+AF
Sbjct: 565 RVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAWHSEKLAIAF 624
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
L+ST PG+ I I KN+R C DCHSA K S+V REI+VRD +RFH F +G CSC D+W
Sbjct: 625 GLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIEGDCSCKDFW 684
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 39/309 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILN-------------------------- 35
C+H L IVH ++ S F++++ + N+++N
Sbjct: 188 CSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSW 247
Query: 36 -----AYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML-RLGL 89
YAK G +D A +LF+ MPV++ V+W +ISG+ + A+ F ML +
Sbjct: 248 TSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRV 307
Query: 90 KPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDA 148
PN+ L VL A GA D G +H + K G + + ++L+DMYA+ ++D A
Sbjct: 308 NPNEAVLVCVLSACAHLGALDQ--GNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCA 365
Query: 149 WFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAST 208
+F + ++ +S+ ++I+G + G+ ALR F +ML E P + V + +
Sbjct: 366 SRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHS 425
Query: 209 GSLEQGKWVHAHVIKSGG--QLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWN 265
G +E+G + A++ G + G +D+ ++G +E A +V + ++ D+V W
Sbjct: 426 GLVEEGSSILANMESLWGIAPKIEHYG-CYIDLLGRAGYLERALEVVKTMPMEPDIVIWR 484
Query: 266 SMLTGCAQH 274
++L+ H
Sbjct: 485 ALLSASRIH 493
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 317/559 (56%), Gaps = 40/559 (7%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
R +H + + + N +++ Y KCG L EAR + DEM +D+V+W +L+ GY+Q
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
N + ++A+ + +M + + + T++S+L A T+ NV
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE------------------NV- 259
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
MY + +F + K+ VSWN +I + + + +A+ +S M +G
Sbjct: 260 -------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
FEP S +SV A T +L GK +H ++ + + N L+DMYAK G +E A
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKAR 364
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
VF + RDVVSW +M++ G G V F K+ +G+ P+ + F+ L ACSHAG
Sbjct: 365 DVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
Query: 311 LLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGAL 369
LL+EG+ F LM H + P H VDLLGRAG + A +FI++M +EP VWGAL
Sbjct: 425 LLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGAL 484
Query: 370 LGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVK 429
LGACR+H + ++G AA+++F+L P SG ++LL+NIYA AGR + R +MK G+K
Sbjct: 485 LGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLK 544
Query: 430 KEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQ 489
K P S VE +H F+ D +HPQ I+++ + +K+K++GYVPDS L +++
Sbjct: 545 KNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEE 604
Query: 490 EREAKLQVHSEKLALAFALISTP-----PGSTIHIKKNIRVCGDCHSAFKFASKVVEREI 544
++E L VHSEKLA+ FAL++T +TI I KN+R+CGDCH A K S++ REI
Sbjct: 605 DKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREI 664
Query: 545 IVRDTNRFHHFRDGFCSCG 563
I+RDTNRFH FR G CSC
Sbjct: 665 IIRDTNRFHVFRFGVCSCA 683
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 39/367 (10%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
++ R VH+ I+ + + ++ ++ AYA + ARK+FDE+P ++++ +I
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y N + +F M ++P+ +T VLKA T GR++H K G
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT-IVIGRKIHGSATKVGLSS 173
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++VG+ L+ MY + + +A + + ++ VSWN+L+ G+A+ + AL EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM- 232
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD--MYAKSGS 245
E + +H G++ L+ V NT + MY K
Sbjct: 233 -ESVKISH-----------DAGTM--------------ASLLPAVSNTTTENVMYVKD-- 264
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+F ++ K+ +VSWN M+ ++ + V + +M +G P+ V+ VL A
Sbjct: 265 ------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
C L G+ +++ + P +D+ + G L++A M +
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS- 377
Query: 366 WGALLGA 372
W A++ A
Sbjct: 378 WTAMISA 384
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 136/330 (41%), Gaps = 28/330 (8%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
R VH+ + N +G L+ YA + A +F + +N + N +I +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
+ ++ F M P H+++ V A + +G++ G+ +H K G FVG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N LV MY K G + +A V + + +RDVVSWNS++ G AQ+ + +M I+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 294 PNQVTFLCVLTACSHA---GLLDEGQGYFALMKKH--------GVEPEEAHYVTFVDLLG 342
+ T +L A S+ ++ +F + KK GV + A V V+L
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 343 RAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHIL 402
R + EP A ++L AC + LG I + P++L
Sbjct: 299 R----------MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI---ERKKLIPNLL 345
Query: 403 LAN----IYASAGRLNDAARARKMMKESGV 428
L N +YA G L A + MK V
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +H +I ++ ++N +++ YAKCGCL++AR +F+ M +D+V+W
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFC 120
TA+IS Y + + +A+ LFS++ GL P+ + L A S AG ++ GR C
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE--GRS----C 432
Query: 121 LK-----YGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG 169
K Y + + ++D+ R ++ +A+ F+ NE W AL+
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/518 (40%), Positives = 316/518 (61%), Gaps = 40/518 (7%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ LK LK +H I S + D+ M + +++ Y+KCG + AR++FD M K++V+W
Sbjct: 166 CSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSW 225
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI+ Y QN A+ F +M LG KP++ TL+SV+ A A K G Q+HA +
Sbjct: 226 NCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAF-KEGVQIHARVV 284
Query: 122 KYG-YDWNVYVGSSLLDMYAR----------FDQM---------------------DDAW 149
K + ++ +G++L+DMYA+ FD+M A
Sbjct: 285 KSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAAR 344
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F ++ K+ VSWNALIAG+ + E E+AL F + RE PTH+++ ++ A A+
Sbjct: 345 SMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLA 404
Query: 210 SLEQGKWVHAHVIK------SGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
LE G+ H+HV+K SG + FVGN+L+DMY K GS+E+ +VF ++++D VS
Sbjct: 405 DLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVS 464
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALM 322
WN+M+ G AQ+G G + F+KML +G P+ VT + L ACSHAGL++EG+ YF ++
Sbjct: 465 WNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMT 524
Query: 323 KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELG 382
K+HG+ P + HY VDLLGRAG L+ A I MP +P A VW +LL AC++H+N+ LG
Sbjct: 525 KEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLG 584
Query: 383 AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNA 442
Y AE+IFE+DP SGP++LLAN+Y+ GR DA RK+M+ GV K+P CSW++ ++
Sbjct: 585 KYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSN 644
Query: 443 VHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
VH+F+ D HPQ+ I+ + +++ ++Q GYVPD+S
Sbjct: 645 VHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDAS 682
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 75/440 (17%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-------- 53
C L+ ++AR VH ++ + F ++ +QN +++ Y KCG LD ARK+FD M
Sbjct: 34 CVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSF 93
Query: 54 -----------------------PVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLK 90
P KD +W ++I+G++Q+D+ E A+ F +M R
Sbjct: 94 NSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFV 153
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
N ++ S L A + D K G Q+H K Y +V++GS L+D Y++ + A
Sbjct: 154 LNDYSFGSGLSAC-SRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARR 212
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F +E KN VSWN LI + + +AL F M GF+P + +SV +A A+ +
Sbjct: 213 VFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAA 272
Query: 211 LEQGKWVHAHVIKSG---GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR-------- 259
++G +HA V+KS L+ +GN LVDMYAK G + +A VF+R+ R
Sbjct: 273 FKEGVQIHARVVKSDKFRNDLI--LGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTM 330
Query: 260 -----------------------DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
D+VSWN+++ G Q+G + + F + R + P
Sbjct: 331 VSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTH 390
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGV------EPEEAHYVTFVDLLGRAGLLDRA 350
TF +L A ++ L+ G+ + + KHG EP+ + +D+ + G ++
Sbjct: 391 YTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEG 450
Query: 351 LKFIREMPIEPTAAVWGALL 370
L+ M +E W ++
Sbjct: 451 LRVFENM-VEKDHVSWNTMI 469
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/561 (38%), Positives = 329/561 (58%), Gaps = 5/561 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L + A+ +H + F D+A N+++ YA G + +AR +F M +D +TWTA+
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISGY +N P+ A+ +++ M + P+ T++S L A + D G ++H G
Sbjct: 363 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLD-VGVKLHELAESKG 421
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + V +++L+MYA+ ++D A +F + K+ VSW+++IAG +AL F
Sbjct: 422 FISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFR 481
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
ML + +P ++ + A A+TG+L GK +HAHV++ G + ++ N L+D+Y K G
Sbjct: 482 HMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCG 540
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
A F +DVVSWN M+ G HG G + +F +M++ G P++VTF+ +L
Sbjct: 541 QTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLC 600
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACS G++ EG F ++ +K+ + P HY VDLL RAG L A FI EMPI P A
Sbjct: 601 ACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDA 660
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
AVWGALL CR+H++VELG AA+ + L+P+D+G H+LL ++YA A + AR RK M
Sbjct: 661 AVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTM 720
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+E G+ + CSWVE K VH F+ +D++HPQ I+ I E++K GY P SH
Sbjct: 721 REKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHCP 780
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
D+ ++ HSE+LA+AF LI+T PG++I + KN C CH K S +V R+
Sbjct: 781 E--DEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRD 838
Query: 544 IIVRDTNRFHHFRDGFCSCGD 564
IIVRD+ + HHF+DG CSCGD
Sbjct: 839 IIVRDSKQLHHFKDGSCSCGD 859
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 188/345 (54%), Gaps = 4/345 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VHAH+L F ++ + N ++ YAKCG + ARK+FD M V D ++W
Sbjct: 199 CGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISW 258
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G+ +N + + LF ML ++PN T++SV ASG +D F +++H +
Sbjct: 259 NAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL-LSDVTFAKEMHGLAV 317
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +V +SL+ MYA M A +F+ +++++ ++W A+I+G+ + +KAL
Sbjct: 318 KRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALE 377
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++ M P + +S A A GSL+ G +H G V N +++MYA
Sbjct: 378 VYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYA 437
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTG-CAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
KS I+ A +VF + ++DVVSW+SM+ G C H +A + +F ML + + PN VTF+
Sbjct: 438 KSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEA-LYYFRHMLAD-VKPNSVTFI 495
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
L AC+ G L G+ A + + G+E E +DL + G
Sbjct: 496 AALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCG 540
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 189/371 (50%), Gaps = 5/371 (1%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ + N +L+ + G A ++F +MP +D+ +W ++ GY ++ + A+ L+ +M+
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++P+ +T VL++ G G D + GR+VHA L++G+ V V ++L+ MYA+ +
Sbjct: 183 AGVRPDVYTFPCVLRSCG-GVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVM 241
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F ++ + +SWNA+IAGH E L F ML + +P + +SV A
Sbjct: 242 AARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASG 301
Query: 207 STGSLEQGKWVHAHVIKSG-GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWN 265
+ K +H +K G VAF N+L+ MYA G + A VF+R+ RD ++W
Sbjct: 302 LLSDVTFAKEMHGLAVKRGFAGDVAFC-NSLIQMYASLGMMRQARTVFSRMDTRDAMTWT 360
Query: 266 SMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKH 325
+M++G ++G + + M N ++P+ +T L AC+ G LD G L +
Sbjct: 361 AMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESK 420
Query: 326 GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVELGAY 384
G +++ ++ +D+A++ + M E W +++ G C H+N E Y
Sbjct: 421 GFISYIVVTNAILEMYAKSKRIDKAIEVFKCMH-EKDVVSWSSMIAGFCFNHRNFEALYY 479
Query: 385 AAERIFELDPH 395
+ ++ P+
Sbjct: 480 FRHMLADVKPN 490
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 131 VGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREG 190
+G+++L M RF + AW +F + ++ SWN ++ G+ + ++AL + M+ G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184
Query: 191 FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAE 250
P +++ V + G+ VHAHV++ G V N L+ MYAK G + A
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244
Query: 251 KVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
KVF+ + D +SWN+M+ G ++G A + F ML + + PN +T V A +G
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA---SG 301
Query: 311 LLDE---GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWG 367
LL + + L K G + A + + + G++ +A M A W
Sbjct: 302 LLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTR-DAMTWT 360
Query: 368 ALLGACRMH--KNVELGAYAAERIFELDPHD 396
A++ + + L YA + + P D
Sbjct: 361 AMISGYEKNGFPDKALEVYALMEVNNVSPDD 391
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/558 (36%), Positives = 331/558 (59%), Gaps = 4/558 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
+ + +H +++ + DI + ++L+ Y KCG + AR +F MP++ +VTW +I GY+
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
N++P+ A F QM GL+ T ++L A+ A +GR VH + ++ + +V
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLL-AACAQTESSLYGRSVHGYVVRRQFLPHV 345
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ ++LL+MY + +++ + +F + +K VSWN +IA + K +A+ F E+L +
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQ 405
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
P +F+ S+V A GSL + +H+++I G + N ++ MYA+SG + +
Sbjct: 406 PLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVAS 465
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
++F++++ +DV+SWN+M+ G A HG GK + F++M NG+ PN+ TF+ VLTACS +
Sbjct: 466 REIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVS 525
Query: 310 GLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+DEG +F LM +++G+ P+ HY DLLGR G L L+FI MPI+PT+ VWG+
Sbjct: 526 GLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGS 585
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL A R ++++ YAAERIF+L+ ++G +I+L+++YA AGR D R R +MKE G+
Sbjct: 586 LLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
++ S VE + F D +H Q IH+ +S KIK+ + S+ + A +
Sbjct: 646 RRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETDDTRNQSYPVPVATR 705
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
HS +LA+ F LIS+ GS I +KKN+R+C CH A K S+ R I+V D
Sbjct: 706 TTTMP--NKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGD 763
Query: 549 TNRFHHFRDGFCSCGDYW 566
+ +H F DG C CGDYW
Sbjct: 764 SKIYHEFSDGSCCCGDYW 781
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L E R H ++ ++D+ N+++ YAK G +++A ++FD MPV+D+VTW
Sbjct: 117 CARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW 176
Query: 62 TALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++ GY N A+ F +M L ++ + + + L A + + G+++H +
Sbjct: 177 NIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQ-GKEIHGYV 235
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+++G + ++ VG+SLLDMY + ++ A +F + + V+WN +I G+A ++A
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M EG + + ++ A A T S G+ VH +V++ + L++MY
Sbjct: 296 DCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMY 355
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +E +EK+F ++ + +VSWN+M+ + + F ++L + P+ T
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 301 CVLTA 305
V+ A
Sbjct: 416 TVVPA 420
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ A +MD+A A+ + N +I G A AL + ML +G P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F++ V A G L++G+ H VIK G + + N+LV YAK G +EDAE+VF
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCVLTACSHAGLL 312
+ + RD+V+WN M+ G +GLG + F++M + + V + L AC
Sbjct: 166 DGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSS 225
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G+ + +HG+E + + +D+ + G + A MP+ T W ++G
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR-TVVTWNCMIGG 284
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 47/261 (18%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ R +H++I+G + + + N +L+ YA+ G + +R++FD+M KD+++W +
Sbjct: 424 LGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTM 483
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY+ + Q + A+ +F +M GL+PN+ T SVL A D+ + +YG
Sbjct: 484 IMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYG 543
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ + M D R+ + + L+
Sbjct: 544 ----------MIPQIEHYGCMTDLL---------------------GREGDLREVLQFIE 572
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK-----SGGQLVAFVGNTLVDM 239
M +PT + S+ TA + ++ ++ + + +G +V L M
Sbjct: 573 SM---PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIV------LSSM 623
Query: 240 YAKSGSIEDAEKVFNRLLKRD 260
YA +G ED E+V RLL ++
Sbjct: 624 YADAGRWEDVERV--RLLMKE 642
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/597 (36%), Positives = 334/597 (55%), Gaps = 39/597 (6%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L E R +HA I+ + F +D+ + ++N Y KCG EAR++FD+M +DMV+W +I
Sbjct: 223 LPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGC 282
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y QN A+ L+ ++ G K + T S+L A + + GR VH+ L+ G D
Sbjct: 283 YVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ-GRLVHSHILERGLDS 341
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA-------- 179
V V ++L++MYA+ +++A +F A+++++ V+W+ LI +A G+ A
Sbjct: 342 EVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 180 --------------------------LRTFSEML-REGFEPTHFSYSSVFTALASTGSLE 212
++ F EM G +P ++ +V A AS G L
Sbjct: 402 RLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 213 QGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCA 272
+ K +HA + +S + V NTL++MYA+ GS+E+AE++F ++ VVSW +M+ +
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 273 QHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEE 331
Q+G + F++M G+ P+ VT+ +L C+H G L++G YF M + HG+ P
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTA 581
Query: 332 AHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFE 391
H+ VDLLGR+G L A + + MP EP W L ACR+H +ELG AAER++E
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 392 LDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDD 451
LDP + P+I ++NIYA+ G A RK M+E G+KK P S++E +H F +
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGK 701
Query: 452 AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALIST 511
HP+ I ++ + ++ GYVPD+ VL + E+E L HSEK+A+AF L+S+
Sbjct: 702 YHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSS 761
Query: 512 -PPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF-RDGFCSCGDYW 566
G I + KN+RVC DCH+A KF +++ R+II+RD NRFH F DG CSCGDYW
Sbjct: 762 RGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 198/373 (53%), Gaps = 8/373 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKDMV 59
C+ + E R +H I S F+ D + N +++ Y KC L +AR +F+ M +++V
Sbjct: 17 CSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVV 76
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W A+I+ Y+QN A++L+ +M GL + T SVL A + A GR++H
Sbjct: 77 SWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ----GREIHNR 132
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
G D + ++L+ MYARF + DA +F +L++++E SWNA+I H++ + A
Sbjct: 133 VFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGA 192
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
LR F EM + +P +Y +V + ++ L +G+ +HA ++ +G V L++M
Sbjct: 193 LRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINM 251
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K GS +A +VF+++ KRD+VSWN M+ Q+G + ++K+ G + TF
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATF 311
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ +L ACS L +G+ + + + G++ E A V++ + G L+ A K M
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK- 370
Query: 360 EPTAAVWGALLGA 372
A W L+GA
Sbjct: 371 NRDAVAWSTLIGA 383
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 198/400 (49%), Gaps = 38/400 (9%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L + R +H + S + ++ N ++ YA+ G + +A+++F + +D +W A+I
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
+SQ+ A+ +F +M + +KPN T +V+ + GR++HA + G+D
Sbjct: 183 HSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPE-GRKIHAEIVANGFDS 240
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
++ V ++L++MY + +A +F ++ ++ VSWN +I + + + +AL + ++
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EGF+ T ++ S+ A +S +L QG+ VH+H+++ G V LV+MYAK GS+E
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360
Query: 248 DAEKVFN----------------------------------RLLKRDVVSWNSMLTGCAQ 273
+A KVFN RL RD + WN+M+T Q
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQ 420
Query: 274 HGLGKATVRWFEKML-RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEA 332
+G A ++ F +M G+ P+ VTF+ VL AC+ G L E + A + + +E
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVV 480
Query: 333 HYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
T +++ R G L+ A + E T W A++ A
Sbjct: 481 VTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 165/334 (49%), Gaps = 43/334 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ +K L + R+VH+HIL +++A+ ++N YAKCG L+EARK+F+ M +D V W
Sbjct: 318 CSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAW 377
Query: 62 TALISGYSQNDQPE--------------------NAII--------------LFSQML-R 86
+ LI Y+ N + NA+I +F +M
Sbjct: 378 STLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGA 437
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
GLKP+ T +VL+A + + + +HA + + NV V ++L++MYAR ++
Sbjct: 438 AGLKPDAVTFIAVLEACASLGRLSEV-KALHAQISESELESNVVVTNTLINMYARCGSLE 496
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
+A LF A + K VSW A++A ++ +AL F EM EG +P +Y+S+
Sbjct: 497 EAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCT 556
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL-LKRDVVS 263
GSLEQG W + + L + +VD+ +SG + DA+++ + + D V+
Sbjct: 557 HGGSLEQG-WRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVA 615
Query: 264 WNSMLTGCAQHG---LGKATVRWFEKMLRNGIAP 294
W + LT C HG LG+A ++ + AP
Sbjct: 616 WMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 175/373 (46%), Gaps = 44/373 (11%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
+P+ T +VL S + D GR +H ++ + VG++L+ MY + D + DA
Sbjct: 4 QPDNVTFLTVL-CSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62
Query: 150 FLFTALE--SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+F +++ +N VSWNA+IA +A+ +AL + M +G H ++ SV L +
Sbjct: 63 SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSV---LGA 119
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
SL QG+ +H V SG + N LV MYA+ GS+ DA+++F L RD SWN++
Sbjct: 120 CSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGV 327
+ +Q G +R F++M + + PN T++ V++ S +L EG+ A + +G
Sbjct: 180 ILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 328 EPEEAHYVTFVDLLGRAG-------LLDR------------------------ALKFIRE 356
+ + +++ G+ G + D+ AL+ ++
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298
Query: 357 MPIEP---TAAVWGALLGACRMHKNVELGAYAAERIFE--LDPHDSGPHILLANIYASAG 411
+ +E T A + ++LGAC K + G I E LD + L N+YA G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDS-EVAVATALVNMYAKCG 357
Query: 412 RLNDAARARKMMK 424
L +A + MK
Sbjct: 358 SLEEARKVFNAMK 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L +L E + +HA I S ++++ + NT++N YA+CG L+EA +LF K +V+W
Sbjct: 454 CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSW 513
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+++ +SQ + A+ LF +M G+KP+ T +S+L G + ++ R
Sbjct: 514 TAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAE 573
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAG---HARKSEGE 177
+G ++++D+ R ++ DA L ++ + V+W + H + GE
Sbjct: 574 LHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGE 633
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTA 204
A E+ P + + S+++ A
Sbjct: 634 AAAERVYELDPSSTAP-YIAMSNIYAA 659
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 322/561 (57%), Gaps = 7/561 (1%)
Query: 9 KEARIVH--AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
KEA+ H A ILG N + + + +++ Y K G EA+ + D + KD+V TALI
Sbjct: 182 KEAQRSHGLAVILGLEVSN-VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 240
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GYSQ + A+ F ML ++PN++T +SVL + G D G+ +H +K G++
Sbjct: 241 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG-NLKDIGNGKLIHGLMVKSGFE 299
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ +SLL MY R +DD+ +F +E N+VSW +LI+G + E AL F +M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+R+ +P F+ SS ++ E+G+ +H V K G + G+ L+D+Y K G
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ A VF+ L + DV+S N+M+ AQ+G G+ + FE+M+ G+ PN VT L VL AC
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLAC 479
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+++ L++EG F +K + HY VDLLGRAG L+ A E+ I P +W
Sbjct: 480 NNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLW 538
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
LL AC++H+ VE+ +I E++P D G IL++N+YAS G+ N + MK+
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 427 GVKKEPACSWVETKNAVHMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
+KK PA SWVE H F+A D +HP I + E+ +K K +GYV D S V
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQD 658
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++ +E L HSEKLA+AFA+ GS I I KN+RVC DCHS K S+V++REII
Sbjct: 659 MEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREII 717
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
RD+ RFHHFRDG CSCGDYW
Sbjct: 718 CRDSKRFHHFRDGSCSCGDYW 738
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 197/351 (56%), Gaps = 3/351 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + + + + AH+L S F +I+ + +++A KCG +D AR++FD M + +VT
Sbjct: 74 QCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVT 132
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W +LI+ ++ + + A+ ++ M+ + P+++TLSSV KA + + +K ++ H
Sbjct: 133 WNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAF-SDLSLEKEAQRSHGLA 191
Query: 121 LKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ G + NV+VGS+L+DMY +F + +A + +E K+ V ALI G+++K E +A
Sbjct: 192 VILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEA 251
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F ML E +P ++Y+SV + + + GK +H ++KSG + +L+ M
Sbjct: 252 VKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTM 311
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y + ++D+ +VF + + VSW S+++G Q+G + + F KM+R+ I PN T
Sbjct: 312 YLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTL 371
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
L CS+ + +EG+ ++ K+G + ++ +DL G+ G D A
Sbjct: 372 SSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 155/287 (54%), Gaps = 1/287 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +LK + +++H ++ S F++ +A Q ++L Y +C +D++ ++F + + V+W
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LISG QN + E A+I F +M+R +KPN FTLSS L+ A ++ GRQ+H
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEE-GRQIHGIVT 395
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KYG+D + Y GS L+D+Y + D A +F L + +S N +I +A+ G +AL
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M+ G +P + SV A ++ +E+G + K L +VD+
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLG 515
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
++G +E+AE + ++ D+V W ++L+ C H + R K+L
Sbjct: 516 RAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKIL 562
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 10/239 (4%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T ++S + S+ K + AH++KSG G+ LVD K G I+ A +VF
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFP-AEISGSKLVDASLKCGDIDYARQVF 122
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + +R +V+WNS++ +H K V + M+ N + P++ T V A S L
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 314 EGQGYFALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E Q L G+E + VD+ + G A + + + + ++G
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 373 CRMHKNVE-LGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR---KMMKESG 427
+ ++ E + A+ + + ++ P++ A++ S G L D + +M +SG
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNE----YTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/520 (39%), Positives = 309/520 (59%), Gaps = 8/520 (1%)
Query: 54 PVKDMVTWTALISGYSQNDQPE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
P D + LI ++Q + +A+ ++ M R + PN+FT VLKA AG +
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKAC-AGMMRLEL 245
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD-----AWFLFTALESKNEVSWNALI 167
G VHA +K+G++ + +V ++L+ MY Q A +F K+ V+W+A+I
Sbjct: 246 GGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMI 305
Query: 168 AGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
G+AR +A+ F EM G P + SV +A A G+LE GKW+ +++ +
Sbjct: 306 GGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIM 365
Query: 228 LVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKM 287
+ N L+DM+AK G ++ A KVF + R +VSW SM+ G A HG G V F++M
Sbjct: 366 RSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM 425
Query: 288 LRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGL 346
+ G+ P+ V F+ VL+ACSH+GL+D+G YF M+ + P+ HY VD+L RAG
Sbjct: 426 MEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGR 485
Query: 347 LDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANI 406
++ AL+F+R MP+EP +W +++ AC ++LG A+ + +P ++LL+NI
Sbjct: 486 VNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNI 545
Query: 407 YASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREI 466
YA R + R+MM G++K P + +E N ++ FVA D +H Q I++ E+
Sbjct: 546 YAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEM 605
Query: 467 SEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVC 526
+IK+ GYVP +S VL D++++E L HSEKLA+AFAL+STPPG+ I I KN+RVC
Sbjct: 606 GREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVC 665
Query: 527 GDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
DCHSA KF SKV REI+VRD NRFHHF++G CSCGD+W
Sbjct: 666 EDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 159/284 (55%), Gaps = 14/284 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLD------EARKLFDEMPV 55
C + +L+ VHA ++ F+ D ++NT+++ Y C C D A+K+FDE PV
Sbjct: 237 CAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYC-CCCQDGSSGPVSAKKVFDESPV 295
Query: 56 KDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGR 114
KD VTW+A+I GY++ A+ LF +M G+ P++ T+ SVL A + GA + G+
Sbjct: 296 KDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALE--LGK 353
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+ ++ + +V + ++L+DM+A+ +D A +F ++ + VSW ++I G A
Sbjct: 354 WLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHG 413
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
G +A+ F EM+ +G +P ++ V +A + +G +++G + + + +++ +V + +
Sbjct: 414 RGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHY-YFNTMENMFSIVPKIEH 472
Query: 235 --TLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSMLTGCAQHG 275
+VDM +++G + +A E V ++ + V W S++T C G
Sbjct: 473 YGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARG 516
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L+ + + ++I + + N +++ +AKCG +D A K+F EM V+ +V+W
Sbjct: 343 CADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSW 402
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T++I G + + + A+++F +M+ G+ P+ VL A DK +
Sbjct: 403 TSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMEN 462
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK-NEVSWNALI-AGHARKSEGEKA 179
+ + ++DM +R ++++A A+ + N+V W +++ A HAR GE
Sbjct: 463 MFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHAR---GELK 519
Query: 180 L--RTFSEMLREGFEPTHFS 197
L E++R EP+H S
Sbjct: 520 LGESVAKELIRR--EPSHES 537
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 335/567 (59%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL+ L A+ ++ ++L + F + ++N +++ YAKCG + AR +F+ M KD V+W
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISGY Q+ A+ LF M+ + + + T ++ S A D KFG+ +H+ +
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA-DLKFGKGLHSNGI 435
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ V ++L+DMYA+ ++ D+ +F+++ + + V+WN +I+ R + L+
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++M + P ++ AS + GK +H +++ G + +GN L++MY+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E++ +VF R+ +RDVV+W M+ +G G+ + F M ++GI P+ V F+
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIA 615
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ ACSH+GL+DEG F MK H ++P HY VDLL R+ + +A +FI+ MPI+
Sbjct: 616 IIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIK 675
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A++W ++L ACR ++E + RI EL+P D G IL +N YA+ + + + R
Sbjct: 676 PDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIR 735
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K +K+ + K P SW+E VH+F + DD+ PQ I+K + + + GY+PD
Sbjct: 736 KSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPR 795
Query: 481 HVLSYADQQEREAKLQV-HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V +++E + +L HSE+LA+AF L++T PG+ + + KN+RVCGDCH K SK+
Sbjct: 796 EVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKI 855
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REI+VRD NRFH F+DG CSC D W
Sbjct: 856 VGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 203/372 (54%), Gaps = 3/372 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +V+ IL F++D+ + N +++ Y++ G L AR++FDEMPV+D+V+W
Sbjct: 116 CAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSW 175
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LISGYS + E A+ ++ ++ + P+ FT+SSVL A G K G+ +H F L
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG-NLLVVKQGQGLHGFAL 234
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + V V + L+ MY +F + DA +F ++ ++ VS+N +I G+ + E+++R
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR 294
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F E L + F+P + SSV A L K+++ +++K+G L + V N L+D+YA
Sbjct: 295 MFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA 353
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A VFN + +D VSWNS+++G Q G ++ F+ M+ + +T+L
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+++ + L G+G + K G+ + + +D+ + G + +LK M
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 362 TAAVWGALLGAC 373
T W ++ AC
Sbjct: 474 TVT-WNTVISAC 484
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 4/364 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALIS 66
L E R +HA ++ + +++ Y+ + +F + P K++ W ++I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
+S+N A+ + ++ + P+++T SV+KA AG D + G V+ L G++
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC-AGLFDAEMGDLVYEQILDMGFE 138
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+++VG++L+DMY+R + A +F + ++ VSWN+LI+G++ E+AL + E+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
P F+ SSV A + ++QG+ +H +KSG V V N LV MY K
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA +VF+ + RD VS+N+M+ G + + + +VR F + L + P+ +T VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRAC 317
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H L + + M K G E +D+ + G + A M + T + W
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-W 376
Query: 367 GALL 370
+++
Sbjct: 377 NSII 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T S + AL+S+ +L + + +HA VI G F L+D Y+ + VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 254 NRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
R+ ++V WNS++ +++GL + ++ K+ + ++P++ TF V+ AC AGL
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLF 120
Query: 313 DEGQG--YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
D G + + G E + VD+ R GLL RA + EMP+ + W +L+
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLI 179
Query: 371 GACRMHKNVE 380
H E
Sbjct: 180 SGYSSHGYYE 189
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 296/494 (59%), Gaps = 3/494 (0%)
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSL 135
A F MLR + PN+FT +LKA A G Q HA LK+G+ + YV ++L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 136 LDMYARFDQ--MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+ MY+ F + DA +F + ++ V+W+A+I G+ R A+ F EM G +
Sbjct: 169 IHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQA 228
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ V A G+LE +WV V + G + N L+D AK G ++ A VF
Sbjct: 229 DEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVF 288
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +R VVSW S++ A G GK VR FE+M G+ P+ V F+ VLTACSHAG++D
Sbjct: 289 EGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVD 348
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG GYF MK ++G+EP+ HY VD+ GRAG+++RA++F+R MPI+P +W +L+ A
Sbjct: 349 EGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSA 408
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR H +ELG + P +I+L+N++A R + + R+ M + G+KK P
Sbjct: 409 CRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVP 468
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CS VE VH F+A D++HPQ I++ E++ +++++G++ +S VL D++++E
Sbjct: 469 GCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKE 528
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
LQ HSEKLA+AFAL+ TPPG+ + + KN+RVC DCH+A K S+V REI+VRD +RF
Sbjct: 529 GALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRF 588
Query: 553 HHFRDGFCSCGDYW 566
H F+DG CSC D+W
Sbjct: 589 HRFKDGSCSCKDFW 602
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 16/279 (5%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
HA L F D + NT+++ Y+ C G L +AR +FD MP + VTW+A+I GY +
Sbjct: 150 HAAALKFGFATDQYVSNTLIHMYS-CFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRG 208
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD---DKFGRQVHAFCLKYGYDWN 128
+A+ LF +M G++ ++ T+ VL A ATD + R V F + G +
Sbjct: 209 GLSSDAVELFREMQANGVQADEVTVIGVL----AAATDLGALELARWVRRFVEREGIGKS 264
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V + ++L+D A+ +D A +F ++ ++ VSW ++I A + G++A+R F EM
Sbjct: 265 VTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKV 324
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P ++ V TA + G +++G + A ++ G + +VDM+ ++G +E
Sbjct: 325 AGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVE 384
Query: 248 DA-EKVFNRLLKRDVVSWNSMLTGCAQHG---LGKATVR 282
A E V ++ + V W S+++ C HG LG++ R
Sbjct: 385 RAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITR 423
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L L+ AR V + + + N +++ AKCG +D A +F+ M + +V+WT
Sbjct: 241 TDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWT 300
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCL 121
++I + + + A+ +F +M G+ P+ VL A S AG D+ G A +
Sbjct: 301 SVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCG-YFDAMKV 359
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIA---GHARKSEGE 177
+YG + + ++DM+ R ++ A F+ T N V W +L++ H R GE
Sbjct: 360 EYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGE 419
Query: 178 KALRTF 183
R+
Sbjct: 420 SITRSL 425
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 329/561 (58%), Gaps = 5/561 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L + A+ +H + F D+A N+++ YA G + +AR +F M +D ++WTA+
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISGY +N P+ A+ +++ M + P+ T++S L A + D G ++H G
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLD-VGVKLHELAESKG 427
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ V V ++LL+MYA+ ++D A +F + K+ VSW+++IAG +AL F
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFR 487
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
ML + +P ++ + A A+TG+L GK +HAHV++ G ++ N L+D+Y K G
Sbjct: 488 HMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCG 546
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
A F +DVVSWN M+ G HG G+ + +F +M++ G P++VTF+ +L
Sbjct: 547 QTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLC 606
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACS G++ EG F ++ K+ + P HY VDLL R G L A FI EMPI P A
Sbjct: 607 ACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDA 666
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
AVWGALL CR+H++VELG AA+ + EL+P+D+G H+LL ++YA AG + AR RK M
Sbjct: 667 AVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTM 726
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+E G+ + CSWVE K VH F+ +D++HPQ I+ I E++K G P SH
Sbjct: 727 REKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVESH-- 784
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
S D+ ++ HSE+LA+AF LI+T PG++I + KN C CH K S +V R+
Sbjct: 785 SPEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRD 844
Query: 544 IIVRDTNRFHHFRDGFCSCGD 564
IIVRD+ + HHF+DG CSCGD
Sbjct: 845 IIVRDSKQVHHFKDGSCSCGD 865
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 188/345 (54%), Gaps = 4/345 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VHAH+L F ++ + N ++ YAKCG + ARK+FD M V D ++W
Sbjct: 205 CGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISW 264
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G+ +N + + LF ML+ ++PN T++SV ASG +D F +++H +
Sbjct: 265 NAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL-LSDITFAKEMHGLAV 323
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +V +SL+ MYA M A +F+ +++++ +SW A+I+G+ + +KAL
Sbjct: 324 KRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALE 383
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++ M P + +S A A GSL+ G +H G V N L++MYA
Sbjct: 384 VYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYA 443
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTG-CAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
KS I+ A +VF + ++DVVSW+SM+ G C H +A + +F ML + + PN VTF+
Sbjct: 444 KSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEA-LYYFRHMLAD-VKPNSVTFI 501
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
L AC+ G L G+ A + + G+ E +DL + G
Sbjct: 502 AALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCG 546
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 187/370 (50%), Gaps = 3/370 (0%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ + N +L+ + G A ++F +MP +D+ +W ++ GY + E A+ L+ +M+
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++P+ +T VL++ G G D + GR+VHA L++G+ V V ++L+ MYA+ +
Sbjct: 189 AGVRPDVYTFPCVLRSCG-GVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVV 247
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F ++ + +SWNA+IAGH E L F ML++ +P + +SV A
Sbjct: 248 AARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASG 307
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ K +H +K G N+L+ MYA G + A VF+R+ RD +SW +
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTA 367
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M++G ++G + + M N ++P+ +T L AC+ G LD G L + G
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 427
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVELGAYA 385
+++ ++ +D+A++ + MP E W +++ G C H+N E Y
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFNHRNFEALYYF 486
Query: 386 AERIFELDPH 395
+ ++ P+
Sbjct: 487 RHMLADVKPN 496
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 335/565 (59%), Gaps = 3/565 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + R+VH + + + + ++ N +L+ Y+ C ++F M K++V+W
Sbjct: 528 CAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSW 587
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I+ Y + + L +M+ G++P+ F ++S L A AG K G+ VH + +
Sbjct: 588 TAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAF-AGDESLKQGKSVHGYTI 646
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G + + V ++L++MY + +++A +F + +K+ +SWN LI G++R + ++
Sbjct: 647 RNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFS 706
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
FS+ML + F P + + + A AS SLE+G+ +HA+ ++ G ++ N LVDMY
Sbjct: 707 LFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYV 765
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G++ A +F+RL K++++SW M+ G HG GK + FE+M +GI P+ +F
Sbjct: 766 KCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSA 825
Query: 302 VLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
+L AC H+GL EG+ +F A+ K++ +EP+ HY VDLL R G L AL+FI MPIE
Sbjct: 826 ILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIE 885
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P +++W +LL CR+HKNV+L A+++F+L+P ++G ++LLANIYA A R + +
Sbjct: 886 PDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLK 945
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
+ G+++ SW+E ++ VH+F+A++ HP I + +++ +++Q G+ P
Sbjct: 946 NKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKK 1005
Query: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
+ L AD + L HS KLA+AF +++ P G I + KN +VC CH A KF SK+
Sbjct: 1006 YALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMC 1065
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDY 565
REII+RD++RFH F G CSC Y
Sbjct: 1066 NREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 179/382 (46%), Gaps = 14/382 (3%)
Query: 1 KC-THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
KC + L L E ++H + A+ N ++ Y++CG +++A ++FD M +D +
Sbjct: 212 KCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAI 271
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++I G N A+ LFS+M G + + T+ SVL A AG G+ VH +
Sbjct: 272 SWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC-AGLGYGLIGKAVHGY 330
Query: 120 CLKYGYDW----------NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIA 168
+K G W + +GS L+ MY + M A +F A+ SK V WN ++
Sbjct: 331 SVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMG 390
Query: 169 GHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
G+A+ E E++L F +M G P + S + + G H +++K G
Sbjct: 391 GYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGA 450
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
V N L+ YAKS I DA VFNR+ ++D +SWNS+++GC+ +GL + F +M
Sbjct: 451 QCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMW 510
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
G + VT L VL AC+ + G+ K G+ E + +D+
Sbjct: 511 TQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQ 570
Query: 349 RALKFIREMPIEPTAAVWGALL 370
+ R M + W A++
Sbjct: 571 STNQIFRSMG-QKNVVSWTAMI 591
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 193/396 (48%), Gaps = 33/396 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAF-----KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK 56
C + L+ A+ HA I S+ K + + +L AY KCG L EAR +FD MP +
Sbjct: 107 CGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVL-AYLKCGDLGEARTVFDGMPPQ 165
Query: 57 --DMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK-ASGAGATDDKFG 113
D+ WT+L+S Y++ + A+ LF QM G+ P+ +S VLK S G+ + G
Sbjct: 166 AADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTE--G 223
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARK 173
+H K G V ++L+ +Y+R +M+DA +F ++ ++ +SWN++I G
Sbjct: 224 EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSN 283
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSG-------- 225
A+ FS+M +G E + + SV A A G GK VH + +KSG
Sbjct: 284 GWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSV 343
Query: 226 --GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSMLTGCAQHGLGKATVR 282
G A +G+ LV MY K G + A +VF+ + K +V WN ++ G A+ G + ++
Sbjct: 344 QSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLS 403
Query: 283 WFEKMLRNGIAPNQVTFLCVLT-----ACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTF 337
F +M GIAP++ C+L +C+ GL+ GY K G + A
Sbjct: 404 LFVQMHELGIAPDEHAISCLLKCITCLSCARDGLV--AHGYIV---KLGFGAQCAVCNAL 458
Query: 338 VDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGAC 373
+ ++ ++ A+ MP + T + W +++ C
Sbjct: 459 ISFYAKSNMIGDAVLVFNRMPRQDTIS-WNSVISGC 493
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 154/305 (50%), Gaps = 2/305 (0%)
Query: 25 NDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV-TWTALISGYSQNDQPENAIILFSQ 83
+D A+ + ++ Y KCG + AR++FD M K V W ++ GY++ + E ++ LF Q
Sbjct: 348 DDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQ 407
Query: 84 MLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
M LG+ P++ +S +LK + + G H + +K G+ V ++L+ YA+ +
Sbjct: 408 MHELGIAPDEHAISCLLKCITC-LSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSN 466
Query: 144 QMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFT 203
+ DA +F + ++ +SWN++I+G + +A+ F M +G E + SV
Sbjct: 467 MIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLP 526
Query: 204 ALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVS 263
A A + G+ VH + +K+G + N L+DMY+ + ++F + +++VVS
Sbjct: 527 ACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVS 586
Query: 264 WNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK 323
W +M+T + GL ++M+ +GI P+ L A + L +G+
Sbjct: 587 WTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTI 646
Query: 324 KHGVE 328
++G+E
Sbjct: 647 RNGME 651
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 197 SYSSVFTALASTGSLEQGKWVHAHVIKSG----GQLVAFVGNTLVDMYAKSGSIEDAEKV 252
SY V SLE K HA + S G + +G LV Y K G + +A V
Sbjct: 99 SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTV 158
Query: 253 FNRLLKR--DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAG 310
F+ + + DV W S+++ A+ G + V F +M G++P+ CVL S G
Sbjct: 159 FDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLG 218
Query: 311 LLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV-WGAL 369
L EG+ L++K G+ A + + R G ++ A + M P A+ W ++
Sbjct: 219 SLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM--HPRDAISWNSM 276
Query: 370 LGAC 373
+G C
Sbjct: 277 IGGC 280
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/550 (41%), Positives = 317/550 (57%), Gaps = 37/550 (6%)
Query: 18 ILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENA 77
+LG N + + + +++ YAK G + +AR + D++ KD+V +TALI GYS + + +
Sbjct: 205 VLGVGVSN-VFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGES 263
Query: 78 IILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLD 137
+ +F M + G++ N++TLSSVL G D GR +H +K G
Sbjct: 264 LQVFRNMTKKGIEANEYTLSSVLVCCG-NLEDLTSGRLIHGLIVKAG------------- 309
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
LES V+W ++I G + E AL F +MLR P F+
Sbjct: 310 -----------------LESA--VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFT 350
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
SSV A +S LEQGK +HA V+K G + +VG L+D Y K GS E A VFN LL
Sbjct: 351 LSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLL 410
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+ DVVS NSM+ AQ+G G ++ F M G+ PN VT+L VL+AC++AGLL+EG
Sbjct: 411 EVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCH 470
Query: 318 YFALMKKHG-VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
F+ + G +E + HY VDLLGRAG L A I ++ I +W LL ACR+H
Sbjct: 471 IFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVV-IWRTLLSACRIH 529
Query: 377 KNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSW 436
+VE+ R+ +L P D G H+LL+N+YAS G + + M+E +KK PA SW
Sbjct: 530 GDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSW 589
Query: 437 VETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQ 496
V+ + +H F+A D +HP I +K E+ EK+K++GYVPD+ VL D++++ L
Sbjct: 590 VDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLY 649
Query: 497 VHSEKLALAFAL-ISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHF 555
HSEKLA+AFAL S +TI I KN+RVCGDCH+ KF SK+V R+II RD RFHHF
Sbjct: 650 YHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHF 709
Query: 556 RDGFCSCGDY 565
R+G CSCGDY
Sbjct: 710 RNGLCSCGDY 719
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 38/347 (10%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C +K + + + +H L F + + N +++AY KCG + ARK+FDE+P + +V
Sbjct: 87 QCIGIKSITDITKIQSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVPHRHIVA 144
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAF 119
W ++I+ Y +N + + AI ++ +M+ G+ P++FT SSV KA S G + G++ H
Sbjct: 145 WNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE--GQRAHGQ 202
Query: 120 CLKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
+ G NV+VGS+L+DMYA+F +M DA + + K+ V + ALI G++ E +
Sbjct: 203 SVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGE 262
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
+L+ F M ++G E ++ SSV + L G+ +H ++K+G
Sbjct: 263 SLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG------------- 309
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
+E A V+W S++ G Q+G + + F +MLR+ I PN T
Sbjct: 310 -------LESA------------VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFT 350
Query: 299 FLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
VL ACS +L++G+ A++ K G++ ++ +D G+ G
Sbjct: 351 LSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCG 397
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
YSS+ S+ + +H +K G +GN L+D Y K GS+ A KVF+ +
Sbjct: 81 YSSLIQQCIGIKSITDITKIQSHALKRGFH--HSLGNKLIDAYLKCGSVVYARKVFDEVP 138
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
R +V+WNSM+ ++G K + +++M+ +GI P++ TF V A S GL+ EGQ
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQ 197
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 312/517 (60%), Gaps = 6/517 (1%)
Query: 53 MPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKF 112
M V V + A IS S+ + A+ L +M G + +++TL L ++ A
Sbjct: 1 MVVPPGVAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNSA---ALLRLP 57
Query: 113 GRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHAR 172
+H+ L+ G +++V ++L+D YA+ + A +F + ++ VSW +L+ G AR
Sbjct: 58 ADALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLAR 117
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
+ AL+ + +M+ G P F+ ++ ++ A +LE G+ VHA ++ V
Sbjct: 118 SRSHDSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSV 177
Query: 233 GNTLVDMYAKSGSIEDAEKVFN--RLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
GN+LV MYAK+GS+ +A+KVF+ R+ + D ++W +++ G AQ+G G+ ++ + M+R+
Sbjct: 178 GNSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRS 237
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDR 349
G P+ VTF+ +L ACSHAGL+D G+ +F M+ +HG+ P HY VDLLGRAG LD
Sbjct: 238 GCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDE 297
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A+ + A VW ALL ACR H+N EL +AA ++ LDP D+ P+++L+N+Y+
Sbjct: 298 AMDLLNRSTTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSR 357
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
AGR D AR R MK G+ KEP CSWV H+F D HP+ A +++K E++E+
Sbjct: 358 AGRWGDVARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTER 417
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
I+ GYV D++ L + RE L HSE+LA+AF L++ P G+ I + KN+RVCGDC
Sbjct: 418 IRGQGYVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDC 477
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+A K ++ REI++RD+N FHH +DG CSCGDYW
Sbjct: 478 HAAIKMVAQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 152/272 (55%), Gaps = 13/272 (4%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQ 70
A +H+ +L + + + N +++AYAK AR +FDEMP +D+V+WT+L++G ++
Sbjct: 58 ADALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLAR 117
Query: 71 NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVY 130
+ ++A+ ++ M+ G+ P++F +++ L +S AGAT + GR VHA ++ D +
Sbjct: 118 SRSHDSALQVYRDMVAAGVGPDEFAVAAAL-SSCAGATALELGRSVHAAAVRLALDPFLS 176
Query: 131 VGSSLLDMYARFDQMDDAWFLF--TALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
VG+SL+ MYA+ + +A +F T ++ + ++W ALI G+A+ G ++L +++M+R
Sbjct: 177 VGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVR 236
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQGK-----WVHAHVIKSGGQLVAFVGNTLVDMYAKS 243
G P + ++ + A + G ++ G+ H I G A +VD+ ++
Sbjct: 237 SGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYA----CMVDLLGRA 292
Query: 244 GSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQH 274
G +++A + NR R D W ++L C H
Sbjct: 293 GRLDEAMDLLNRSTTRLDATVWKALLAACRTH 324
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVK--DMV 59
C L+ R VHA + A +++ N++++ YAK G L EA+K+FD V D +
Sbjct: 150 CAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPI 209
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
TWTALI GY+QN + ++ +++ M+R G +P+ T +L A D +
Sbjct: 210 TWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSM 269
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIA 168
++G + ++D+ R ++D+A L ++ + + W AL+A
Sbjct: 270 QAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTTRLDATVWKALLA 319
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 296/494 (59%), Gaps = 3/494 (0%)
Query: 76 NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSL 135
A F MLR + PN+FT +LKA A G Q HA LK+G+ + YV ++L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 136 LDMYARFDQ--MDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
+ MY+ F + DA +F + ++ V+W+A+I G+ R A+ F EM G +
Sbjct: 169 IHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQA 228
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ V A G+LE +WV V + G + N L+D AK G ++ A VF
Sbjct: 229 DEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVF 288
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ +R VVSW S++ A G GK VR FE+M G+ P+ V F+ VLTACSHAG++D
Sbjct: 289 EGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVD 348
Query: 314 EGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG GYF MK ++G+EP+ HY VD+ GRAG+++RA++F+R MPI+P +W +L+ A
Sbjct: 349 EGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSA 408
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR H +ELG + P +I+L+N++A R + + R+ M + G+KK P
Sbjct: 409 CRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVP 468
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CS VE VH F+A D++HPQ I++ E++ +++++G++ +S VL D++++E
Sbjct: 469 GCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKE 528
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
LQ HSEKLA+AFAL+ TPPG+ + + KN+RVC DCH+A K S+V REI+VRD +RF
Sbjct: 529 GALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRF 588
Query: 553 HHFRDGFCSCGDYW 566
H F+DG CSC D+W
Sbjct: 589 HRFKDGSCSCKDFW 602
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 16/279 (5%)
Query: 15 HAHILGSAFKNDIAMQNTILNAYAKC---GCLDEARKLFDEMPVKDMVTWTALISGYSQN 71
HA L F D + NT+++ Y+ C G L +AR +FD MP + VTW+A+I GY +
Sbjct: 150 HAAALKFGFATDQYVSNTLIHMYS-CFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRG 208
Query: 72 DQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATD---DKFGRQVHAFCLKYGYDWN 128
+A+ LF +M G++ ++ T+ VL A ATD + R V F + G +
Sbjct: 209 GLSSDAVDLFREMQANGVQADEVTVIGVL----AAATDLGALELARWVRRFVEREGIGKS 264
Query: 129 VYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLR 188
V + ++L+D A+ +D A +F ++ ++ VSW ++I A + G++A+R F EM
Sbjct: 265 VTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKV 324
Query: 189 EGFEPTHFSYSSVFTALASTGSLEQG-KWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
G P ++ V TA + G +++G + A ++ G + +VDM+ ++G +E
Sbjct: 325 AGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVE 384
Query: 248 DA-EKVFNRLLKRDVVSWNSMLTGCAQHG---LGKATVR 282
A E V ++ + V W S+++ C HG LG++ R
Sbjct: 385 RAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITR 423
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWT 62
T L L+ AR V + + + N +++ AKCG +D A +F+ M + +V+WT
Sbjct: 241 TDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWT 300
Query: 63 ALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCL 121
++I + + + A+ +F +M G+ P+ VL A S AG D+ G A +
Sbjct: 301 SVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCG-YFDAMKV 359
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIA---GHARKSEGE 177
+YG + + ++DM+ R ++ A F+ T N V W +L++ H R GE
Sbjct: 360 EYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGE 419
Query: 178 KALRTF 183
R+
Sbjct: 420 SITRSL 425
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/584 (37%), Positives = 343/584 (58%), Gaps = 27/584 (4%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L + R +H IL S D +Q+++LN Y KC + EARK+F+ M +++ ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
TA+IS Y Q + A+ LFS+M ++ ++PN +T +++L A G + + GR+VH
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAV-EGLGNLEKGRKVHRHL 239
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
G+D NV V ++L+ MY + +A +F ++ ++N +SW ++IA +A+ ++AL
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA-FVGNTLVDM 239
F M EP+ S+SS A A G+L++G+ +H V+++ L + + +L+ M
Sbjct: 300 NLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEA--HLASPQMETSLLSM 354
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
YA+ GS++DA +VFNR+ RD S N+M+ QHG K +R + +M + GI + +TF
Sbjct: 355 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITF 414
Query: 300 LCVLTACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ VL ACSH L+ + + +F +L+ HGV P HY+ VD+LGR+G L A + + MP
Sbjct: 415 VSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP 474
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
+ A W LL C+ H ++ G AA ++FEL P ++ P++ L+N+YA+A R +DA R
Sbjct: 475 YQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARR 534
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVA-----NDDAHPQRAM--IHKKWREISEKIK 471
RK M+E GV A S++E N +HMF + + H R M + E+ E +K
Sbjct: 535 VRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMK 594
Query: 472 QIGYVPDSSHVLSYADQQ------EREAKLQVHSEKLALAFALIST--PPGS-TIHIKKN 522
Q GYVPD+ V Y +QQ E++ L HSE+LA+A+ LI+ P S + + +
Sbjct: 595 QAGYVPDTREV--YLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNS 652
Query: 523 IRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
RVC DCHSA K S ++E+ I VRD NRFHHF G CSCGD+W
Sbjct: 653 HRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 206/360 (57%), Gaps = 12/360 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
CT L+ L+E R +H H++ + F+ DI ++ +L YAKCG LD+A+++F+ M +KD+ W
Sbjct: 20 CTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAW 79
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLK--ASGAGATDDKFGRQVHAF 119
+++IS Y++ + E A++L+ +M+ G++PN T + L AS AG D GR +H
Sbjct: 80 SSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLAD---GRAIHQR 136
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
L + + SLL+MY + D+M +A +F ++++N S+ A+I+ + + E +A
Sbjct: 137 ILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEA 196
Query: 180 LRTFSEMLR-EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
L FS M + E EP ++++++ A+ G+LE+G+ VH H+ G V N LV
Sbjct: 197 LELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVT 256
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MY K GS +A KVF+ + R+V+SW SM+ AQHG + + F++M + P+ V+
Sbjct: 257 MYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVS 313
Query: 299 FLCVLTACSHAGLLDEGQG-YFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
F L AC+ G LDEG+ + +++ H P+ + + + R G LD A + M
Sbjct: 314 FSSALNACALLGALDEGREIHHRVVEAHLASPQ--METSLLSMYARCGSLDDARRVFNRM 371
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 37/371 (9%)
Query: 88 GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDD 147
G+ ++F ++S++ A ++ GR++H + G+ ++ + ++LL MYA+ +DD
Sbjct: 5 GIVADKFIVTSLVAACTKLQALEE-GRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDD 63
Query: 148 AWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
A +F +E K+ +W+++I+ +AR GE A+ + M+ EG EP +++ AS
Sbjct: 64 AKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCAS 123
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
L G+ +H ++ S + ++L++MY K + +A KVF + R+V S+ +M
Sbjct: 124 VAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAM 183
Query: 268 LTGCAQHGLGKATVRWFEKMLR-NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
++ Q G + F +M + I PN TF +L A G L++G+ + G
Sbjct: 184 ISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRG 243
Query: 327 VEPEEAHYVTFVDLLGRAG-------LLD------------------------RALKFIR 355
+ V + G+ G + D AL +
Sbjct: 244 FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFK 303
Query: 356 EMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHI--LLANIYASAGRL 413
M +EP+ + + L AC + ++ G R+ E H + P + L ++YA G L
Sbjct: 304 RMDVEPSGVSFSSALNACALLGALDEGREIHHRVVE--AHLASPQMETSLLSMYARCGSL 361
Query: 414 NDAARARKMMK 424
+DA R MK
Sbjct: 362 DDARRVFNRMK 372
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 43/236 (18%)
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
M G F +S+ A +LE+G+ +H H+I +G + + L+ MYAK GS
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
++DA++VF + +D+ +W+S+++ A+ G G+ V + +M+ G+ PN VTF C L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 306 C-SHAGLLD----------------------------------EGQGYFALMKKHGVEPE 330
C S AGL D E + F MK V
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS- 179
Query: 331 EAHYVTFVDLLGRAGLLDRALKFIREMP----IEPTAAVWGALLGACRMHKNVELG 382
Y + +AG AL+ M IEP A + +LGA N+E G
Sbjct: 180 ---YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 232
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/508 (41%), Positives = 302/508 (59%), Gaps = 33/508 (6%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+ FT S VLKA +D G+ +H K G+ N+++ + +L++Y +M DA
Sbjct: 8 PDTFTCSFVLKAC-LKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAML 66
Query: 151 LFTALESKNEVSWNALIAGHARKSEGE-----------KALRTFSEMLR----------- 188
LF + ++ V+WN +IA A++ + + K +R+++ M+
Sbjct: 67 LFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEA 126
Query: 189 ---------EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
E P + SV A A G L+ G+ VH + KSG + V NTL+DM
Sbjct: 127 IDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDM 186
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y K G +E+A +VF + +R VVSW++M+ G A HG + + F +M++ G+ PN VTF
Sbjct: 187 YVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTF 246
Query: 300 LCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMP 358
+ +L ACSH GL+DEG+ +FA M +GV P+ HY VDL RAGLL+ A +FI MP
Sbjct: 247 IGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP 306
Query: 359 IEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAAR 418
I+P VWGALLG C++HKN++L A + + ELDP + G +++++NIYA A R DAAR
Sbjct: 307 IKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAAR 366
Query: 419 ARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPD 478
RK+MK+ GVKK S + VH FVA D HPQ I K W ++ K+K+ GY P
Sbjct: 367 VRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPK 426
Query: 479 SSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASK 538
+S VL +++E+E L HSEKLA+ F L++TP G+ I I KN+RVC DCH+A K S
Sbjct: 427 TSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISG 486
Query: 539 VVEREIIVRDTNRFHHFRDGFCSCGDYW 566
+V REIIVRD NRFH FRDG CSC D+W
Sbjct: 487 IVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 160/307 (52%), Gaps = 36/307 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + + +H F +++ +QN ILN Y CG + +A LF++MP +D VTW
Sbjct: 20 CLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDAVTW 79
Query: 62 -------------------------------TALISGYSQNDQPENAIILFSQMLRLGLK 90
T++ISG+ Q +P AI LF ++ ++
Sbjct: 80 NIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVR 139
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
PN+ T+ SVL A+ A D GR VH + K G+ NV+V ++L+DMY + +++A
Sbjct: 140 PNEVTVVSVL-AACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARR 198
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F +E + VSW+A+IAG A + E+AL FSEM++ G +P ++ + A + G
Sbjct: 199 VFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGL 258
Query: 211 LEQGKWVHAHVIKSGGQL--VAFVGNTLVDMYAKSGSIEDA-EKVFNRLLKRDVVSWNSM 267
+++G+ A + G + + G +VD+++++G +E+A E + + +K + V W ++
Sbjct: 259 IDEGRRFFASMTADYGVIPQIEHYG-CVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGAL 317
Query: 268 LTGCAQH 274
L GC H
Sbjct: 318 LGGCKVH 324
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 108/196 (55%), Gaps = 6/196 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L RIVH + S FK ++ + NT+++ Y KCGCL+ AR++F EM + +V+W
Sbjct: 152 CADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSW 211
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+A+I+G + + Q E A+ LFS+M++LG+KPN T +L A D+ R +
Sbjct: 212 SAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTA 271
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAG---HARKSEGE 177
YG + ++D+++R +++A F+ + N V W AL+ G H E
Sbjct: 272 DYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAE 331
Query: 178 KALRTFSEM--LREGF 191
+A++ SE+ L +G+
Sbjct: 332 EAIKHLSELDPLNDGY 347
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 328/559 (58%), Gaps = 3/559 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C H L + +H + L F + + N + +YAKCG L A+++F + K + +W
Sbjct: 760 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 819
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
ALI G++Q++ P ++ QM GL P+ FT+ S+L A + + G++VH F +
Sbjct: 820 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC-SKLKSLRLGKEVHGFII 878
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ + +++V S+L +Y ++ LF A+E K+ VSWN +I G+ + ++AL
Sbjct: 879 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 938
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ G + S VF A + SL G+ HA+ +K + AF+ +L+DMYA
Sbjct: 939 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 998
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K+GSI + KVFN L ++ SWN+M+ G HGL K ++ FE+M R G P+ +TFL
Sbjct: 999 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 1058
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFI-REMPI 359
VLTAC+H+GL+ EG Y MK G++P HY +D+LGRAG LD+AL+ + EM
Sbjct: 1059 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 1118
Query: 360 EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARA 419
E +W +LL +CR+H+N+E+G A ++FEL+P ++LL+N+YA G+ D +
Sbjct: 1119 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 1178
Query: 420 RKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDS 479
R+ M E ++K+ CSW+E V FV + I W + KI ++GY PD+
Sbjct: 1179 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 1238
Query: 480 SHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V ++E+ +L+ HSEKLAL + LI T G+TI + KN+R+C DCH+A K SKV
Sbjct: 1239 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 1298
Query: 540 VEREIIVRDTNRFHHFRDG 558
+EREI+VRD RFHHF++G
Sbjct: 1299 MEREIVVRDNKRFHHFKNG 1317
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 172/375 (45%), Gaps = 10/375 (2%)
Query: 6 KKLKEARIVHAHILGSA-FKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
K ++ R +H + GS +ND + I+ YA CG D++R +FD + K++ W A+
Sbjct: 453 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 512
Query: 65 ISGYSQNDQPENAIILFSQMLRL-GLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKY 123
IS YS+N+ + + F +M+ L P+ FT V+KA AG +D G VH +K
Sbjct: 513 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC-AGMSDVGIGLAVHGLVVKT 571
Query: 124 GYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTF 183
G +V+VG++L+ Y + DA LF + +N VSWN++I + E++
Sbjct: 572 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 631
Query: 184 SEMLRE----GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
EM+ E F P + +V A + GK VH +K + N L+DM
Sbjct: 632 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 691
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG--IAPNQV 297
Y+K G I +A+ +F ++VVSWN+M+ G + G T +ML G + ++V
Sbjct: 692 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 751
Query: 298 TFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
T L + C H L + K E FV + G L A + +
Sbjct: 752 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 811
Query: 358 PIEPTAAVWGALLGA 372
T W AL+G
Sbjct: 812 R-SKTVNSWNALIGG 825
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 182/377 (48%), Gaps = 4/377 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +++ + VH + ++ + N +++ Y+KCGC+ A+ +F K++V+W
Sbjct: 657 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 716
Query: 62 TALISGYSQNDQPENAIILFSQMLRLG--LKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
++ G+S + QML G +K ++ T+ + + + +++H +
Sbjct: 717 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL-KELHCY 775
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
LK + +N V ++ + YA+ + A +F + SK SWNALI GHA+ ++ +
Sbjct: 776 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 835
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
L +M G P F+ S+ +A + SL GK VH +I++ + FV +++ +
Sbjct: 836 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 895
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y G + + +F+ + + +VSWN+++TG Q+G + F +M+ GI ++
Sbjct: 896 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 955
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI 359
+ V ACS L G+ A KH +E + + +D+ + G + ++ K +
Sbjct: 956 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK- 1014
Query: 360 EPTAAVWGALLGACRMH 376
E + A W A++ +H
Sbjct: 1015 EKSTASWNAMIMGYGIH 1031
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/559 (22%), Positives = 232/559 (41%), Gaps = 70/559 (12%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + VH ++ + D+ + N +++ Y G + +A +LFD MP +++V+W
Sbjct: 552 CAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSW 611
Query: 62 TALISGYSQNDQPENAIILFSQMLRL----GLKPNQFTLSSVLKASGAGATDDKFGRQVH 117
++I +S N E + +L +M+ P+ TL +VL A + G+ VH
Sbjct: 612 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC-AREREIGLGKGVH 670
Query: 118 AFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGE 177
+ +K D + + ++L+DMY++ + +A +F +KN VSWN ++ G + + +
Sbjct: 671 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 730
Query: 178 KALRTFSEMLREGFEPTHFSYSSVFTALAST---GSLEQGKWVHAHVIKSGGQLVAFVGN 234
+ML G E ++ A+ L K +H + +K V N
Sbjct: 731 GTFDVLRQMLAGG-EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 789
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
V YAK GS+ A++VF+ + + V SWN+++ G AQ + ++ +M +G+ P
Sbjct: 790 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 849
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLL------- 347
+ T +L+ACS L G+ + ++ +E + Y++ + L G L
Sbjct: 850 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 909
Query: 348 ------------------------DRALKFIREM---PIEPTAAVWGALLGACRMHKNVE 380
DRAL R+M I+ + GAC + ++
Sbjct: 910 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 969
Query: 381 LG----AYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES---------- 426
LG AYA + + E D+ L ++YA G + +++ +KE
Sbjct: 970 LGREAHAYALKHLLE---DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 1026
Query: 427 -----GVKKEPACSWVETKNAVH-----MFVANDDAHPQRAMIHKKWREISEKIKQIGYV 476
G+ KE + E + H F+ A +IH+ R + + G
Sbjct: 1027 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 1086
Query: 477 PDSSHVLSYADQQEREAKL 495
P+ H D R +L
Sbjct: 1087 PNLKHYACVIDMLGRAGQL 1105
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 96 LSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYV-GSSLLDMYARFDQMDDAWFLFTA 154
L +L+ASG D + GR++H N V + ++ MYA DD+ F+F A
Sbjct: 442 LGLLLQASGK-RKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 500
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTALASTGSLEQ 213
L SKN WNA+I+ ++R ++ L TF EM+ P HF+Y V A A +
Sbjct: 501 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 560
Query: 214 GKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ 273
G VH V+K+G FVGN LV Y G + DA ++F+ + +R++VSWNSM+ +
Sbjct: 561 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 620
Query: 274 HGLGKATVRWFEKML-RNG---IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEP 329
+G + + +M+ NG P+ T + VL C+ + G+G K ++
Sbjct: 621 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 680
Query: 330 EEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
E +D+ + G + A + I +M W ++G
Sbjct: 681 ELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 722
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 328/629 (52%), Gaps = 69/629 (10%)
Query: 6 KKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALI 65
K + + +HA I+ + + ++++ + ++ + +F+ K++ T+ ALI
Sbjct: 92 KTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALI 151
Query: 66 SGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGY 125
G + N NAI F MLR G+KP++ T VLK S AG + G +H L+ G
Sbjct: 152 RGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLK-SMAGLFSTELGMAIHCMILRCGI 210
Query: 126 DWNVYVGSSLLDMYA-----------------RFD-------------------QMDDAW 149
+ + +V SL+DMY RFD M A
Sbjct: 211 ELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAV 270
Query: 150 FLFTALESKNEVSWNALIAGHA-------------------------------RKSEGEK 178
LF A+ K VSW+ LI G A R + EK
Sbjct: 271 KLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEK 330
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
AL FS+ML EG P F+ S +A A G LE G +H ++ +G L +G LVD
Sbjct: 331 ALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVD 390
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVT 298
MYAK G+IE A +VF ++ + +W M+ G A HG + + F++M+ GI P++V
Sbjct: 391 MYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVV 450
Query: 299 FLCVLTACSHAGLLDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
FL +LTAC H+G +D G +F M+ + +EP HY VD+LGR+G L AL+FI M
Sbjct: 451 FLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERM 510
Query: 358 PIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAA 417
P+ P +WGAL ACR HK ++ +A ++ +L+P +G +I L+N YA+ G+ DA
Sbjct: 511 PMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAE 570
Query: 418 RARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVP 477
R R +M+ GV K S +E + VH FV+ D H I K EI + GY+P
Sbjct: 571 RVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIP 630
Query: 478 DSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFAS 537
+ VL +Q+E+E L H EKLALAFALI T PG TI I KN++VCGDCHS K+AS
Sbjct: 631 GTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYAS 690
Query: 538 KVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K+ +REI++RD RFHHF+DG CSC D+W
Sbjct: 691 KISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ +H +I + A+ +++ YAKCG ++ A ++F E K + TW
Sbjct: 357 CAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTW 416
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T +I G++ + E AI F QM+ G+KP++ ++L A D + L
Sbjct: 417 TVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRL 476
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAW-FLFTALESKNEVSWNALIAGHARKSEGEKAL 180
Y + ++ + ++DM R Q+ +A F+ + + V W AL + + A
Sbjct: 477 DYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAK 536
Query: 181 RTFSEMLREGFEPTHF-SYSSVFTALASTGSLEQGKWV 217
+++L+ EPTH +Y + A A+ G E + V
Sbjct: 537 FALNKLLK--LEPTHTGNYIFLSNAYAALGQWEDAERV 572
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 173 KSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
K+ K + S + PT + S+ + L Q +HA +I + +
Sbjct: 59 KTSENKPKSSLSALFIPPTTPTEAHFISLIHGSKTILQLHQ---IHAQIIIHNLSSSSLI 115
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI 292
L+ + SI + VFN +++ ++N+++ G + + F MLR+GI
Sbjct: 116 TTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGI 175
Query: 293 APNQVTFLCVLTACSHAGLLDE--GQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
P+++T+ VL S AGL G ++ + G+E + V+ VD+ + L A
Sbjct: 176 KPDRLTYPFVLK--SMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSA 233
Query: 351 LKFIREMPIE----PTAAVWGALLGAC----RMHKNVEL 381
K E P +A +W L+ C M K V+L
Sbjct: 234 FKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKL 272
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 330/558 (59%), Gaps = 4/558 (0%)
Query: 10 EARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYS 69
+ + +H +++ + DI + ++L+ Y KCG + AR +F MP++ +VTW +I GY+
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286
Query: 70 QNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNV 129
N++P+ A F QM GL+ T ++L A A +GR VH + ++ + +V
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAAC-AQTESSLYGRSVHGYVVRRQFLPHV 345
Query: 130 YVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE 189
+ ++LL+MY + +++ + +F + +K VSWN +IA + K +A+ F E+L +
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQ 405
Query: 190 GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDA 249
P +F+ S+V A GSL + +H+++I G + N ++ MYA+SG + +
Sbjct: 406 PLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVAS 465
Query: 250 EKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHA 309
++F++++ +DV+SWN+M+ G A HG GK + F++M NG+ PN+ TF+ VLTACS +
Sbjct: 466 REIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVS 525
Query: 310 GLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGA 368
GL+DEG +F LM +++G+ P+ HY DLLGR G L L+FI MPI+PT+ VWG+
Sbjct: 526 GLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGS 585
Query: 369 LLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGV 428
LL A R ++++ YAAERIF+L+ ++G +I+L+++YA AGR D R R +MKE G+
Sbjct: 586 LLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645
Query: 429 KKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQ 488
++ S VE + F D +H Q IH+ +S KI++ + S+ + A +
Sbjct: 646 RRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDDTRNQSYPVPVATR 705
Query: 489 QEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRD 548
HS +LA+ F LIS+ GS I +KKN+R+C CH A K S+ R I+V D
Sbjct: 706 TTTMP--NKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGD 763
Query: 549 TNRFHHFRDGFCSCGDYW 566
+ +H F DG C CGDYW
Sbjct: 764 SKIYHEFSDGSCCCGDYW 781
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L E R H ++ ++D+ N+++ YAK G +++A ++FD MPV+D+VTW
Sbjct: 117 CARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW 176
Query: 62 TALISGYSQNDQPENAIILFSQMLR-LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
++ GY N A+ F +M L ++ + + + L A + + G+++H +
Sbjct: 177 NTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQ-GKEIHGYV 235
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+++G + ++ VG+SLLDMY + ++ A +F + + V+WN +I G+A ++A
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
F +M EG + + ++ A A T S G+ VH +V++ + L++MY
Sbjct: 296 DCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMY 355
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
K G +E +EK+F ++ + +VSWN+M+ + + F ++L + P+ T
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415
Query: 301 CVLTA 305
V+ A
Sbjct: 416 TVVPA 420
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 2/240 (0%)
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
SL+ A +MD+A A+ + N +I G A AL + ML +G P
Sbjct: 46 SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
F++ V A G L++G+ H VIK G + + N+LV YAK G +EDAE+VF
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN-GIAPNQVTFLCVLTACSHAGLL 312
+ + RD+V+WN+M+ G +GLG + F++M + + V + L AC
Sbjct: 166 DGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSS 225
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
+G+ + +HG+E + + +D+ + G + A MP+ T W ++G
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR-TVVTWNCMIGG 284
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 47/261 (18%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L+ R +H++I+G + + + N +L+ YA+ G + +R++FD+M KD+++W +
Sbjct: 424 LGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTM 483
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
I GY+ + Q + A+ +F +M GL+PN+ T SVL A D+ + +YG
Sbjct: 484 IMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYG 543
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
++ + M D R+ + + L+
Sbjct: 544 ----------MIPQIEHYGCMTDLL---------------------GREGDLREVLQFIE 572
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK-----SGGQLVAFVGNTLVDM 239
M +PT + S+ TA + ++ ++ + + +G +V L M
Sbjct: 573 SM---PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIV------LSSM 623
Query: 240 YAKSGSIEDAEKVFNRLLKRD 260
YA +G ED E+V RLL ++
Sbjct: 624 YADAGRWEDVERV--RLLMKE 642
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 321/561 (57%), Gaps = 7/561 (1%)
Query: 9 KEARIVH--AHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALIS 66
KEA+ H A ILG N + + + +++ Y K G EA+ + D + KD+V TALI
Sbjct: 164 KEAQRSHGLAVILGLEVSN-VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 222
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GYSQ + A+ F ML ++PN++T +SVL + G D G+ +H +K G++
Sbjct: 223 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG-NLKDIGNGKLIHGLMVKSGFE 281
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
+ +SLL MY R +DD+ +F ++ N+V+W +LI+G + E AL F +M
Sbjct: 282 SALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKM 341
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
+R+ +P F+ SS ++ E+G+ VH V K G + G+ L+++Y K G
Sbjct: 342 MRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCS 401
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
+ A VF+ L + DV+S N+M+ AQ+G G+ + FE+M+ G+ PN VT L VL AC
Sbjct: 402 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLAC 461
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
+++GL++EG F +K + HY VD+LGRAG L+ A I E+ P +W
Sbjct: 462 NNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDLVLW 520
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
LL AC++H+ VE+ +I E+ P D G ILL+N+YAS G+ + MKE
Sbjct: 521 RTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEM 580
Query: 427 GVKKEPACSWVETKNAVHMFVANDD-AHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
+KK PA SWVE H F+A D +HP I + E+ +K K +GYV D S V
Sbjct: 581 KLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQD 640
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
++ +E L HSEKLA+AFA+ GS I I KN+RVC DCHS K S++++REII
Sbjct: 641 MEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRIIKREII 699
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
RD+ RFHHFRDG CSCGDYW
Sbjct: 700 CRDSKRFHHFRDGSCSCGDYW 720
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 196/351 (55%), Gaps = 3/351 (0%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + + + + A +L S F +++ + +++A KCG + AR+LFD MP + +VT
Sbjct: 56 QCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGMPERHIVT 114
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W ++I+ Y ++ + + A+ ++ M+ + P+++TLSSV KA + + +K ++ H
Sbjct: 115 WNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAF-SDLSLEKEAQRSHGLA 173
Query: 121 LKYGYDW-NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ G + NV+VGS+L+DMY +F + +A + +E K+ V ALI G+++K E +A
Sbjct: 174 VILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEA 233
Query: 180 LRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDM 239
++ F ML E +P ++Y+SV + + + GK +H ++KSG + +L+ M
Sbjct: 234 VKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTM 293
Query: 240 YAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTF 299
Y + ++D+ VF + + V+W S+++G Q+G + + F KM+R+ + PN T
Sbjct: 294 YLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTL 353
Query: 300 LCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRA 350
L CS+ + +EG+ ++ K+G + ++ ++L G+ G D A
Sbjct: 354 SSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMA 404
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 161/303 (53%), Gaps = 3/303 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +LK + +++H ++ S F++ +A Q ++L Y +C +D++ +F + + VTW
Sbjct: 259 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTW 318
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+LISG QN + E A+I F +M+R +KPN FTLSS L+ A ++ GRQVH
Sbjct: 319 TSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEE-GRQVHGIVS 377
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
KYG+D + Y GS L+++Y + D A +F L + +S N +I +A+ G +AL
Sbjct: 378 KYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALE 437
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F M+ G +P + SV A ++G +E+G + K L +VDM
Sbjct: 438 LFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLG 497
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
++G +E+AE + + D+V W ++L+ C H + R K+L IAP L
Sbjct: 498 RAGRLEEAEMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRKILE--IAPGDEGTLI 555
Query: 302 VLT 304
+L+
Sbjct: 556 LLS 558
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/601 (37%), Positives = 335/601 (55%), Gaps = 42/601 (6%)
Query: 2 CTHLKKLKEARIVHAHIL---GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDM 58
C L+ LK+ VHA I+ S F+ + L+ + L A+ +F +
Sbjct: 77 CKTLRHLKQ---VHAQIITHHNSPFQLSALASLSALSPFPTF--LAYAKTIFHHLQNPPP 131
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
+ +LI S + P A+ L+ ML+ GLKP+ T V+KA + FG VH
Sbjct: 132 SLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVT-WFGLLVHT 190
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE--- 175
+K G++ + Y+ SSL+ +YA + A LF +++ VSWNA+I G+ + E
Sbjct: 191 HVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGH 250
Query: 176 ----------------------------GEKALRTFSEMLREGFEPTHFSYSSVFTALAS 207
+AL F +M G +PT + S+ +A A
Sbjct: 251 ARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAH 310
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+L++G +H ++ + ++ + VG LVDMYAK G I A +VFN + +DV++WN++
Sbjct: 311 LGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTI 370
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHG 326
+ G A HG K + F++M G+ PN +TF+ +L+ACSHAG++DEGQ M +G
Sbjct: 371 IAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYG 430
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+EP+ HY +DLL RAG L+ A++ I MP+EP + GALLG CR+H N ELG
Sbjct: 431 IEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVG 490
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
+R+ L P SG +ILL+NIYA+A + +DA + R +MK +G+ K P S +E K VH F
Sbjct: 491 KRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRF 550
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQ-IGYVPDSSHVLSYADQQEREAKLQVHSEKLALA 505
VA D +HP+ I++K EI ++K IGY D+ +VL +++++E L VHSEKLA+A
Sbjct: 551 VAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIA 610
Query: 506 FALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
+ L+ I I KN+RVC DCH K SKV REIIVRD NRFHHF DG CSC D+
Sbjct: 611 YGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDF 670
Query: 566 W 566
W
Sbjct: 671 W 671
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 314/554 (56%), Gaps = 33/554 (5%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+HA + D+ + + + Y K D+ARKLFDE+P +++ TW A IS + +
Sbjct: 66 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 125
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
P AI F + R+ PN T + L A + G Q+H L+ G+D +V + S
Sbjct: 126 PREAIEAFIEFRRIDGHPNSITFCAFLNAC-SDWLHLNLGMQLHGLVLRSGFDTDVSIRS 184
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
S + +FT + +KN VSW +L+A + + E EKA + ++ E
Sbjct: 185 SEI--------------IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 230
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
+ F SSV +A A LE G+ +HAH +K+ + FVG+ LVDMY K G IED+E+ F
Sbjct: 231 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 290
Query: 254 NRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
+ + ++++V+ NS++ G A G + FE+M G G ++
Sbjct: 291 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG-----------------CGAVE 333
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G F M+ +G+EP HY VD+LGRAG+++RA +FI++MPI+PT +VWGAL A
Sbjct: 334 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 393
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CRMH +LG AAE +F+LDP DSG H+LL+N +A+AGR +A R+ +K G+KK
Sbjct: 394 CRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGA 453
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SW+ KN VH F A D +H I ++ +++ GY PD L +++E+
Sbjct: 454 GYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKA 513
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
A++ HSEKLALAF L+S P I I KN+R+CGDCHS FKF S V+REIIVRD NRF
Sbjct: 514 AEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRF 573
Query: 553 HHFRDGFCSCGDYW 566
H F+DG CSC DYW
Sbjct: 574 HRFKDGICSCKDYW 587
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 35/363 (9%)
Query: 37 YAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTL 96
Y+K + AR + P +++V+WT+LISG +QN A++ F +M R + + +
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREAVASLRLPV 61
Query: 97 SSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE 156
+ G+Q+HA +K G +V+VG S DMY + DDA LF +
Sbjct: 62 T---------------GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 106
Query: 157 SKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
+N +WNA I+ +A+ F E R P ++ + A + L G
Sbjct: 107 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 166
Query: 217 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQ-HG 275
+H V++SG + SI +E +F + ++ VSW S++ Q H
Sbjct: 167 LHGLVLRSG--------------FDTDVSIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 212
Query: 276 LGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV 335
KA+V + + ++ + + VL+AC+ L+ G+ A K VE
Sbjct: 213 DEKASVLYL-RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 271
Query: 336 TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPH 395
VD+ G+ G ++ + + EMP E +L+G V++ E E+ P
Sbjct: 272 ALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPR 327
Query: 396 DSG 398
G
Sbjct: 328 GCG 330
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 138 MYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFS 197
MY++ D + A + ++N VSW +LI+G A+ AL F EM RE
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-------- 52
Query: 198 YSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL 257
A+AS GK +HA +K G L FVG + DMY K+ +DA K+F+ +
Sbjct: 53 ------AVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 106
Query: 258 KRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQG 317
+R++ +WN+ ++ G + + F + R PN +TF L ACS L+ G
Sbjct: 107 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 166
Query: 318 YFALMKKHGVEPE 330
L+ + G + +
Sbjct: 167 LHGLVLRSGFDTD 179
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L+ R +HAH + + + I + + +++ Y KCGC++++ + FDEMP K++VT
Sbjct: 242 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 301
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LI GY+ Q + A+ LF +M G GA ++ + +
Sbjct: 302 NSLIGGYAHQGQVDMALALFEEM----------------APRGCGAVENGM-KIFDSMRS 344
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVS-WNALIAGHARKSEGEKAL 180
YG + S ++DM R ++ A+ + + +S W AL +A + G+ L
Sbjct: 345 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL--QNACRMHGKPQL 402
Query: 181 RTFSEMLREGFEP----THFSYSSVFTALASTGSLEQGKWVHAHVIK 223
+ +P H S+ F A G+W A+ ++
Sbjct: 403 GLLAAENLFKLDPKDSGNHVLLSNTFAA--------AGRWAEANTVR 441
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/577 (35%), Positives = 332/577 (57%), Gaps = 16/577 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDMV 59
C+ +++ R++H+ I S F++++ + N ++ Y +CG ++EARK+FD M ++D+V
Sbjct: 257 CSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+W ++S Y ND+ ++AI L+ R+ L+ ++ T S+L A + A D GR +H
Sbjct: 317 SWNIMLSAYVHNDRGKDAIQLYQ---RMQLRADKVTYVSLLSACSS-AEDVGLGRVLHKQ 372
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKA 179
+ + NV VG++L+ MYA+ +A +F +E ++ +SW +I+ + R+ +A
Sbjct: 373 IVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEA 432
Query: 180 LRTFSEMLR-------EGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFV 232
F +ML + +P ++ ++ A A +LEQGK V G V
Sbjct: 433 CHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAV 492
Query: 233 GNTLVDMYAKSGSIEDAEKVFNRLLKR-DVVSWNSMLTGCAQHGLGKATVRWFEKMLRNG 291
G +V++Y K G IE+ ++F+ + R DV WN+M+ AQ G ++ F +M G
Sbjct: 493 GTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG 552
Query: 292 IAPNQVTFLCVLTACSHAGLLDEGQGYFALMKK--HGVEPEEAHYVTFVDLLGRAGLLDR 349
+ P+ +F+ +L ACSH GL D+G+ YF M V H+ DLLGR G L
Sbjct: 553 VRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKE 612
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
A +F+ ++P++P A W +LL ACR H++++ A ++ L+P + ++ L+NIYA
Sbjct: 613 AEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAE 672
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
+ + A+ RK M E GVKKE S +E +H F DDAHP+ I ++ ++ +
Sbjct: 673 LQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQ 732
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDC 529
+K+ GYVPD+ VL + D+QE+E L HSE+LA+A LISTP G+ + + KN+RVC DC
Sbjct: 733 MKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDC 792
Query: 530 HSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
H+A K SK+ R+I+VRD RFH F+DG CSC DYW
Sbjct: 793 HTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 218/457 (47%), Gaps = 18/457 (3%)
Query: 1 KCTHLKKLKEARIVHA-HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMV 59
+C + L E R +H+ + + ++ + N I++ YA C +A+ FD + +++
Sbjct: 52 RCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLY 111
Query: 60 TWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAF 119
+WT L++ ++ + Q + + +M + G++P+ T + L + G + G ++H
Sbjct: 112 SWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCG-DPESLRDGIRIHQM 170
Query: 120 CLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSEGEK 178
+ + + V ++LL+MY + + A +F +E ++N +SW+ + HA +
Sbjct: 171 VVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWE 230
Query: 179 ALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVD 238
ALR F ML G + T + ++ +A +S ++ G+ +H+ + SG + V N ++
Sbjct: 231 ALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMT 290
Query: 239 MYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQ 296
MY + G++E+A KVF+ + + RDVVSWN ML+ + GK ++ +++M + ++
Sbjct: 291 MYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADK 347
Query: 297 VTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYV----TFVDLLGRAGLLDRALK 352
VT++ +L+ACS A E G ++ K V E V V + + G A
Sbjct: 348 VTYVSLLSACSSA----EDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARA 403
Query: 353 FIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGR 412
+M + + W ++ A + V + +++ EL+ + S + + A
Sbjct: 404 VFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRV-KPDALAFVTI 461
Query: 413 LNDAARARKMMKESGVKKEPACSWVETKNAVHMFVAN 449
LN A + + V ++ A + + AV V N
Sbjct: 462 LNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVN 498
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 341/614 (55%), Gaps = 70/614 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C +L R VH + S D+ + N +++ YAKCG +++A K+F+ M KD+VTW
Sbjct: 241 CGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTW 300
Query: 62 TALISGYSQNDQPENAIILFS-----------------------------------QMLR 86
A+++GYSQN + E+A+ LF QM
Sbjct: 301 NAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCG 360
Query: 87 LGLKPNQFTLSSVLKA-SGAGATDDKFGRQVHAFCLKYGYDW-------NVYVGSSLLDM 138
+PN TL S+L A + GA G++ H + +K+ ++ V ++L+DM
Sbjct: 361 CRCRPNVVTLMSLLSACASVGAL--LHGKETHCYSVKFILKGEHNDDTDDLAVINALIDM 418
Query: 139 YARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSEMLR--EGFEPT 194
YA+ ++ A +F + K+ V+W +I G+A+ + AL+ FSEM + P
Sbjct: 419 YAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPN 478
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSG--GQLVAFVGNTLVDMYAKSGSIEDAEKV 252
F+ S V A A +L+ GK +HA+V++ V FV N L+DMY+KSG ++ A+ V
Sbjct: 479 DFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVV 538
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ + KR+ VSW S+LTG HG + R F++M + + + +TFL VL ACSH+G+
Sbjct: 539 FDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM- 597
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
GV+P HY VDLLGRAG L A++ I +MPIEPT VW ALL A
Sbjct: 598 -----------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSA 646
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
CR+H N EL +AA+++ EL + G + LL+NIYA+A R D AR +MK +G+KK P
Sbjct: 647 CRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIP 706
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
SWV+ + + F D H Q I++ ++ ++IK ++ L D +E+
Sbjct: 707 GWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK-------ANFSLHDVDDEEKG 759
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
+L HSEKLALA+A+++ PPG+ I I KN+R+CGD HSA + S +VE EII+RD++RF
Sbjct: 760 DQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRF 819
Query: 553 HHFRDGFCSCGDYW 566
H F++G CSC YW
Sbjct: 820 HQFKNGSCSCKGYW 833
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 192/446 (43%), Gaps = 56/446 (12%)
Query: 6 KKLKEARIVHA-HILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDE--MPVKDMVTW- 61
K L +A+++H +I+ N ++ Y + A L ++ P V W
Sbjct: 35 KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWW 94
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
LI + P A+ LF +M L P+ +T V KA G ++ + G +H +
Sbjct: 95 NQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGE-ISNFELGASIHGCVI 153
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESK---NEVSWNALIAGHARKSEGEK 178
+ G++ NV+V ++++ MY + + A +F L + + V+WN++++ ++
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV 213
Query: 179 ALRTFSEM-LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLV 237
A+ F EM + G P ++ G G+ VH ++SG FVGN LV
Sbjct: 214 AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALV 273
Query: 238 DMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHG--------LGKA--------TV 281
DMYAK G +EDA KVF R+ +DVV+WN+M+TG +Q+G GK V
Sbjct: 274 DMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333
Query: 282 RW-------------------FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY---- 318
W F +M PN VT + +L+AC+ G L G+
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 393
Query: 319 --FALMKKHGVEPEEAHYVT-FVDLLGRAGLLDRALKFIREM-PIEPTAAVWGALLGACR 374
F L +H + ++ + +D+ + L+ A E+ P + W ++G
Sbjct: 394 VKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYA 453
Query: 375 MHKNVELGAYAAERIFELD----PHD 396
H + +F++D P+D
Sbjct: 454 QHGDANHALQLFSEMFKIDNCIVPND 479
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 318/560 (56%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ +HA L + + ++L+ YAKCG L A+++FDEMP V WTALI+
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y A+ + G++P+ FT VL A A D G V + G
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC-ARIADLATGETVWRAAEQEGVAQ 205
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+V ++ +D+Y + +M A +F + K+ V+W A++ G+A +AL F M
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 265
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG +P ++ + +A G+L+ G+ V +G L+DMYAK GS
Sbjct: 266 AEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 325
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ K+D++ WN+M+ G G K +M ++G+ N TF+ +L +C+
Sbjct: 326 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 385
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+ +G+ YF M K + + P HY VDLL RAGLL A + + +MP+ A +
Sbjct: 386 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL 445
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLG C++H+N EL + +++ L+P +SG +++L+NIY++ GR DAA+ R MK
Sbjct: 446 GALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAK 505
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
GV+K PACSWVE + VH F D +HP I+KK E+ ++K +GY P + V+
Sbjct: 506 GVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDV 565
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ +E+E L HSEKLA+AF L+ T PG TI + KN+RVC DCH+A K S++ REIIV
Sbjct: 566 EDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIV 625
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH FRDG CSC DYW
Sbjct: 626 RDNNRFHCFRDGSCSCNDYW 645
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%)
Query: 91 PNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWF 150
P+ T+ LK++ + G Q+HA LK N +V +SLL +YA+ + A
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 151 LFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGS 210
+F + + V W ALI + + +A+ G P F+ V TA A
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 211 LEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTG 270
L G+ V + G FV VD+Y K G + A +VF+++ +D V+W +M+ G
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 271 CAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
A +G + + F M G+ P+ L+AC+ G LD G+
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGR 293
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 336/577 (58%), Gaps = 14/577 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L+ LK HA+I+ D ++ + + + Y+KCG L++A K F + K++++W
Sbjct: 175 CSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISW 234
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
T+ +S N P + LF +M+ +KPN+FTL+S L + + G QV + C+
Sbjct: 235 TSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSAL-SQCCEIPSLELGTQVCSLCI 293
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSE------ 175
K+GY+ N+ V +SLL +Y + + +A F ++ + V+WNA+IAGHA+ E
Sbjct: 294 KFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNL 353
Query: 176 -----GEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA 230
G +AL+ FS++ + G +P F+ SSV + + ++EQG+ +HA IK+G
Sbjct: 354 SACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDV 413
Query: 231 FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRN 290
V +L+ MY K GSIE A K F + R +++W SM+TG +QHG+ + + FE M
Sbjct: 414 IVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLA 473
Query: 291 GIAPNQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDR 349
G+ PN VTF+ VL+ACSHAG++ + YF +M KK+ ++P HY VD+ R G L++
Sbjct: 474 GVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQ 533
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYAS 409
AL FI++M EP+ +W + CR H N+ELG YA+E++ L P D ++LL N+Y S
Sbjct: 534 ALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLS 593
Query: 410 AGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEK 469
A R +D +R RKMM+ V K SW+ K+ V+ F ND HP ++I K ++ K
Sbjct: 594 ADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAK 653
Query: 470 IKQIGYVPDSSHVLSYADQQEREAKLQV-HSEKLALAFALISTPPGSTIHIKKNIRVCGD 528
K +GY S +S +++E+ + + HSEKLA+ F L + P S I + K+ +C D
Sbjct: 654 AKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLPNSSPIRVVKSTLICRD 713
Query: 529 CHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDY 565
H+ K S + REIIV+D+ R H F +G CSCG++
Sbjct: 714 SHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCGNF 750
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 205/387 (52%), Gaps = 13/387 (3%)
Query: 1 KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60
+C + +IVH H++ + ++ + + ++N YAKCG +++AR++F+ MP +++V
Sbjct: 73 QCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVA 132
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT L+ G+ QN QP++AI +F +ML G P+ +TLS+VL A + K G Q HA+
Sbjct: 133 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHAC-SSLQSLKLGDQFHAYI 191
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+KY D++ VGS+L +Y++ +++DA F+ + KN +SW + ++ K L
Sbjct: 192 IKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGL 251
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F EM+ E +P F+ +S + SLE G V + IK G + V N+L+ +Y
Sbjct: 252 RLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLY 311
Query: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQH-----------GLGKATVRWFEKMLR 289
KSG I +A + FNR+ +V+WN+M+ G AQ G ++ F K+ +
Sbjct: 312 LKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQ 371
Query: 290 NGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR 349
+G+ P+ T VL+ CS +++G+ A K G + + + + + G ++R
Sbjct: 372 SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIER 431
Query: 350 ALKFIREMPIEPTAAVWGALLGACRMH 376
A K EM T W +++ H
Sbjct: 432 ASKAFLEMSTR-TMIAWTSMITGFSQH 457
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/540 (39%), Positives = 311/540 (57%), Gaps = 33/540 (6%)
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHA 118
V W ALISG++++ + E + F M+R T SVL A G G D G QVH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKG-KDLLLGMQVHK 185
Query: 119 FCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEK 178
L+ G + V ++L+DMYA MD AW LF ++ ++ SW ++I+G R + ++
Sbjct: 186 RVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDR 245
Query: 179 ALRTFSEM--------------------LREGFEP-----------THFSYSSVFTALAS 207
A F M R+ E F+ SV TA A
Sbjct: 246 ARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQ 305
Query: 208 TGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSM 267
G+LE G+W ++ + G ++ FVGN L+DMY+K GSIE A VF + RD +W ++
Sbjct: 306 LGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAI 365
Query: 268 LTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYF-ALMKKHG 326
+ G A +G G+ + F +MLR P++VTF+ VLTAC+HAGL+D+G+ +F ++ + +
Sbjct: 366 ILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYN 425
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
+ P HY +D+LGRAG L AL I +MP++P + +WG LL +CR++ N E+G AA
Sbjct: 426 ISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAA 485
Query: 387 ERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMF 446
ER+ ELDP +S +ILL+N+YA + R D R R+++ E G+KKEP CS +E +H F
Sbjct: 486 ERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEF 545
Query: 447 VANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAF 506
VA D +HP I+ K + ++ GYVPD + VL ++E++ L HSEKLA+ F
Sbjct: 546 VAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTF 605
Query: 507 ALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
AL+++ I I KN+R+C DCH+A K SK+ RE+IVRD RFHHFR G CSC DYW
Sbjct: 606 ALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 43/354 (12%)
Query: 43 LDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 102
L AR L D +P + ++ +SG+ E A+ + +ML G +P+ +T S+LKA
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGHG----AEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 103 SGAGATDDKFGRQ----VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFT----A 154
+ A +HA +K+G + N + SSL+ MYA A + A
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 155 LESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQG 214
V WNALI+GH R E + +F +M+R T +Y SV +A L G
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLG 180
Query: 215 KWVHAHVIKSGGQLVAFVGNTLVDMYA-------------------------------KS 243
VH V++SG V N LVDMYA +S
Sbjct: 181 MQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRS 240
Query: 244 GSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVL 303
G ++ A +F+ + +RD ++W +M+ G Q G + + F M + ++ T + V+
Sbjct: 241 GQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVV 300
Query: 304 TACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREM 357
TAC+ G L+ G+ M + G++ + +D+ + G ++RAL ++M
Sbjct: 301 TACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 148/308 (48%), Gaps = 36/308 (11%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C K L VH +L S D ++N +++ YA+CG +D A LF+ M ++ M +W
Sbjct: 171 CGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASW 230
Query: 62 TALISGYSQNDQPENAIILFSQM---------------LRLG----------------LK 90
T++ISG ++ Q + A LF M +++G ++
Sbjct: 231 TSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVR 290
Query: 91 PNQFTLSSVLKASGA-GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
++FT+ SV+ A GA + G + + G +V+VG++L+DMY++ ++ A
Sbjct: 291 ADEFTMVSVVTACAQLGALET--GEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERAL 348
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + ++++ +W A+I G A GE+A+ F MLR P ++ V TA G
Sbjct: 349 DVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAG 408
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKSGSIEDAEKVFNRL-LKRDVVSWNSM 267
+++G+ + ++ V L+D+ ++G +++A +++ +K + W ++
Sbjct: 409 LVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTL 468
Query: 268 LTGCAQHG 275
L C +G
Sbjct: 469 LASCRVYG 476
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 339/573 (59%), Gaps = 14/573 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L A +HAH++ + + D +++++N YAKC ARK+FDEMP + +
Sbjct: 64 CAFLSLPLAASQLHAHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMP-NPTICY 122
Query: 62 TALISGYSQNDQPENAIILFSQMLR-------LGLKPNQFTLSSVLKASGAGATDDKFGR 114
A+ISGYS N +P +A+ LF +M R + + N TL S++ AT G
Sbjct: 123 NAMISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSV-ATHLTIGV 181
Query: 115 QVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKS 174
+H C+++G+ ++ V +SL+ MY + +++ A +F + ++ ++WNA+I+G+A+
Sbjct: 182 CLHGCCVRFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNG 241
Query: 175 EGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN 234
L +SEM G + V +A A+ G+ G+ V + + G F+ N
Sbjct: 242 HARCVLEVYSEMKLSGVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRN 301
Query: 235 TLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAP 294
LV+MYA+ G++ A +VF+R ++ VVSW +++ G HG G+ + F++M+ + + P
Sbjct: 302 ALVNMYARCGNLTRAREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRP 361
Query: 295 NQVTFLCVLTACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKF 353
++ F+ VL+ACSHAGL D G YF M +K+G++P HY VDLLGRAG L+ A+
Sbjct: 362 DKTVFVSVLSACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNL 421
Query: 354 IREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRL 413
I+ M ++P AVWGALLGAC++HKN E+ A + + EL+P + G ++LL+NIY A L
Sbjct: 422 IKSMKVKPDGAVWGALLGACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNL 481
Query: 414 NDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQI 473
+R R MM+E ++K+P S+VE K +++F + D +HPQ I++ E+ +K++
Sbjct: 482 EGVSRVRVMMRERKLRKDPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVKEV 541
Query: 474 GYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAF 533
+ P+ +E VHSEKLA+AFAL++T G+ I + KN+RVC DCH
Sbjct: 542 -HPPNEK---CQGRSEELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFI 597
Query: 534 KFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
K SK+V R+ IVRD RFHHFRDG CSC DYW
Sbjct: 598 KLVSKIVNRQFIVRDATRFHHFRDGICSCKDYW 630
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 179/410 (43%), Gaps = 51/410 (12%)
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W + S+ Q A+ L+ MLR PN FT +LK S A + Q+HA
Sbjct: 22 WNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLK-SCAFLSLPLAASQLHAHV 80
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G + Y SSL++ YA+ A +F + + + +NA+I+G++ S+ A+
Sbjct: 81 IRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNPT-ICYNAMISGYSFNSKPLHAV 139
Query: 181 RTFSEMLRE-------GFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG 233
F +M RE + S+ + + L G +H ++ G V
Sbjct: 140 CLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVA 199
Query: 234 NTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIA 293
N+LV MY K G +E A KVF+ +L RD+++WN+M++G AQ+G + + + +M +G++
Sbjct: 200 NSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVS 259
Query: 294 PNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDR---- 349
+ VT L V++AC++ G G+ +++ G V++ R G L R
Sbjct: 260 ADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREV 319
Query: 350 ---------------------------ALKFIREM---PIEPTAAVWGALLGACRMHKNV 379
AL+ EM + P V+ ++L AC
Sbjct: 320 FDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLT 379
Query: 380 ELGA---YAAERIFELDPHDSGP--HILLANIYASAGRLNDAARARKMMK 424
+ G ER + L P GP + + ++ AGRL +A K MK
Sbjct: 380 DRGLEYFKEMERKYGLQP---GPEHYSCVVDLLGRAGRLEEAVNLIKSMK 426
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 162 SWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHV 221
+WN + +++ + +AL + MLR F P F++ + + A +HAHV
Sbjct: 21 AWNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHV 80
Query: 222 IKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATV 281
I++G Q + ++L++ YAK A KVF+ + + +N+M++G + + V
Sbjct: 81 IRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDE-MPNPTICYNAMISGYSFNSKPLHAV 139
Query: 282 RWFEKMLRN-------GIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHY 334
F KM R + N VT L +++ CS A L G + G + A
Sbjct: 140 CLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVA 199
Query: 335 VTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ V + + G ++ A K EM + W A++
Sbjct: 200 NSLVTMYVKCGEVELARKVFDEMLVRDLIT-WNAMI 234
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/561 (40%), Positives = 320/561 (57%), Gaps = 45/561 (8%)
Query: 11 ARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP--VKD--MVTWTALIS 66
R +H IL + D ++ ++++ Y K L A K+FDE P VK+ ++ W LI
Sbjct: 159 GRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIH 218
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
GY + A LF M P + T S
Sbjct: 219 GYCRMGDLVKATELFDSM------PKKDTGS----------------------------- 243
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
WN SL++ + + M A LF + KN VSW ++ G ++ + EKAL TF M
Sbjct: 244 WN-----SLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCM 298
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
L EG P ++ S +A A G+L+ G +H ++ +G +L +G LVDMYAK G+I
Sbjct: 299 LEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNI 358
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
E AEKVF+ ++ ++ W+ M+ G A HG + +++FE M G P+ V FL VL AC
Sbjct: 359 EHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNAC 418
Query: 307 SHAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAV 365
SH+G ++EG +F M++ + +EP HY VD+LGRAG LD ALKFIR MPI P V
Sbjct: 419 SHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVV 478
Query: 366 WGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKE 425
WGAL ACR HKNVE+ A++++ +L+P G ++ L+N YAS GR +DA R R M++
Sbjct: 479 WGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRD 538
Query: 426 SGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSY 485
G K+P S++E + +H FVA D+ H + I+ K EIS ++ GY + VL
Sbjct: 539 HGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHN 598
Query: 486 ADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREII 545
+++E+E L HSEKLALAF ++ST PG+T+ I KN+RVC DCHS K+ASK+ +REII
Sbjct: 599 IEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREII 658
Query: 546 VRDTNRFHHFRDGFCSCGDYW 566
+RD RFHHF DG CSCGDYW
Sbjct: 659 LRDMKRFHHFNDGVCSCGDYW 679
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 151/391 (38%), Gaps = 77/391 (19%)
Query: 114 RQVHAFCLKYGYDWNVYVGSSLLDMY----ARFDQMDDAWFLFTALESKNEVSWNALIAG 169
RQ+H Y NV+ S ++ + + + +D A +F E KN +NALI G
Sbjct: 59 RQIHGQL----YRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRG 114
Query: 170 HARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLV 229
A S E ++ F ML+ P ++ V + A+ + G+ +H ++K G +
Sbjct: 115 LAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFD 174
Query: 230 AFVGNTLVDMYAK-----------------------------------SGSIEDAEKVFN 254
+FV +LVDMY K G + A ++F+
Sbjct: 175 SFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFD 234
Query: 255 RLLKRDVVSWNSMLTGCAQHG-LGKA-----------TVRW------------------- 283
+ K+D SWNS++ G + G +G+A V W
Sbjct: 235 SMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALET 294
Query: 284 FEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGR 343
F ML G PN T + L+AC+ G LD G + +G + VD+ +
Sbjct: 295 FFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAK 354
Query: 344 AGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERI-FELDPHDSGPHIL 402
G ++ A K E E +W ++ +H + E + F DS +
Sbjct: 355 CGNIEHAEKVFHETK-EKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLA 413
Query: 403 LANIYASAGRLNDAARARKMMKESGVKKEPA 433
+ N + +G++N+ + M+ G EP+
Sbjct: 414 VLNACSHSGQVNEGLKFFDNMRR-GYLIEPS 443
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 14/233 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L +H ++ G+ FK ++ + +++ YAKCG ++ A K+F E K ++ W
Sbjct: 317 CAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIW 376
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA-SGAGATDD--KFGRQVHA 118
+ +I G++ + A+ F M G KP+ +VL A S +G ++ KF
Sbjct: 377 SVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDN--- 433
Query: 119 FCLKYGY--DWNVYVGSSLLDMYARFDQMDDAWFLFTALE-SKNEVSWNALIAGHARKSE 175
++ GY + ++ + ++DM R ++D+A A+ + + V W AL
Sbjct: 434 --MRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKN 491
Query: 176 GEKALRTFSEMLREGFEPTH-FSYSSVFTALASTGSLEQGKWVHAHVIKSGGQ 227
E A ++L+ EP H SY + A AS G + + V + G
Sbjct: 492 VEMAELASKKLLQ--LEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAH 542
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 328/557 (58%), Gaps = 9/557 (1%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
+H+ ++ F +I+++ I N Y KCG LD A ++M K+ V T L+ GY++ +
Sbjct: 214 IHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAAR 273
Query: 74 PENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGS 133
+A++LF +M+ G++ + F S +LKA A D G+Q+H++C+K G + V VG+
Sbjct: 274 NRDALLLFGKMISEGVELDGFVFSIILKACAA-LGDLYTGKQIHSYCIKLGLESEVSVGT 332
Query: 134 SLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEP 193
L+D Y + + + A F ++ N+ SW+ALIAG+ + + ++AL F + +G
Sbjct: 333 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLL 392
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG--NTLVDMYAKSGSIEDAEK 251
F Y+++F A ++ L G +HA IK G LVA++ + ++ MY+K G ++ A +
Sbjct: 393 NSFIYTNIFQACSAVSDLICGAQIHADAIKKG--LVAYLSGESAMISMYSKCGQVDYAHQ 450
Query: 252 VFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGL 311
F + K D V+W +++ A HG +R F++M +G+ PN VTF+ +L ACSH+GL
Sbjct: 451 AFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGL 510
Query: 312 LDEGQGYFALMK-KHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
+ EG+ M ++GV P HY +D+ RAGLL AL+ IR +P EP W +LL
Sbjct: 511 VKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLL 570
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
G C H+N+E+G AA+ IF LDP DS ++++ N+YA AG+ ++AA+ RKMM E ++K
Sbjct: 571 GGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRK 630
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIG-YVPDSSHVLSYADQQ 489
E +CSW+ K VH FV D HPQ I+ K +E++ K+ + + + L D
Sbjct: 631 EVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENAL--CDFT 688
Query: 490 EREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDT 549
ER+ +L HSE+LA+A+ LI T + I + KN R C DCH K S V RE++VRD
Sbjct: 689 ERKEQLLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDG 748
Query: 550 NRFHHFRDGFCSCGDYW 566
NRFHH G CSC DYW
Sbjct: 749 NRFHHINSGECSCRDYW 765
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 182/390 (46%), Gaps = 7/390 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L L + ++ H + A N + N IL Y C A + FD++ +D+ +W
Sbjct: 102 CGTLGALSDGKLFHNRLQRMANSNKF-IDNCILKMYCDCKSFTSAERFFDKIVDQDLSSW 160
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+ +IS Y++ + + A+ LF +ML LG+ PN S+++ + + D G+Q+H+ +
Sbjct: 161 STIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLD-LGKQIHSQLI 219
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
+ G+ N+ + + + +MY + +D A + KN V+ L+ G+ + + AL
Sbjct: 220 RIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALL 279
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F +M+ EG E F +S + A A+ G L GK +H++ IK G + VG LVD Y
Sbjct: 280 LFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYV 339
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K E A + F + + + SW++++ G Q G + F+ + G+ N +
Sbjct: 340 KCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTN 399
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+ ACS L G A K G+ + + + + G +D A + + +P
Sbjct: 400 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTID-KP 458
Query: 362 TAAVWGALLGACRMHKNVELGAYAAERIFE 391
W A++ A H A+ A R+F+
Sbjct: 459 DTVAWTAIICAHAYHGK----AFEALRLFK 484
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ + L +HA + ++ ++ +++ Y+KCG +D A + F + D V W
Sbjct: 404 CSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAW 463
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
TA+I ++ + + A+ LF +M G++PN T +L A + + + +
Sbjct: 464 TAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSD 523
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG 169
+YG + + + ++D+Y+R + +A + +L + +V SW +L+ G
Sbjct: 524 EYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/562 (39%), Positives = 327/562 (58%), Gaps = 8/562 (1%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L ++ A+ +H + F D+A N+++ Y G + +A K+F M KD ++WTA+
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISGY +N P+ A+ +++ M + P+ T++S L A D G ++H G
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLD-VGIKLHELAQNKG 429
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ V V ++LL+MYA+ +D A +F + K+ VSW+++IAG +AL F
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFR 489
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
ML +P ++ + +A A+TG+L GK +HA+V++ G +V N L+D+Y K G
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
A F+ ++DVVSWN ML+G HGLG + F +M+ G P++VTF+ +L
Sbjct: 549 QTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLC 608
Query: 305 ACSHAGLLDEGQGYFALM-KKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
ACS AG++ +G F +M +K + P HY VDLL R G L A I MPI+P A
Sbjct: 609 ACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA 668
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
AVWGALL CR+H++VELG AA+ I EL+P+D H+LL ++Y AG+ AR RK M
Sbjct: 669 AVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTM 728
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+E G++++ CSWVE K H F+ +D++HPQ I+ I E++K G+ P V
Sbjct: 729 REKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP----VE 784
Query: 484 SYADQQEREAKLQV-HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVER 542
S D++ E + HSE+LA+AF LI+T PG+TI + KN C CH FK S++V R
Sbjct: 785 SLEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRR 844
Query: 543 EIIVRDTNRFHHFRDGFCSCGD 564
EI VRDT + H F+DG CSCGD
Sbjct: 845 EITVRDTKQLHCFKDGDCSCGD 866
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 191/345 (55%), Gaps = 4/345 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + + R VHAH+L F +++ + N ++ YAKCG + ARK+FD M V D ++W
Sbjct: 207 CGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISW 266
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G+ +N + E + LF ML ++PN T++SV ASG ++ F +++H F +
Sbjct: 267 NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM-LSEVGFAKEMHGFAV 325
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +V +SL+ MY +M DA +F+ +E+K+ +SW A+I+G+ + +KAL
Sbjct: 326 KRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALE 385
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++ M P + +S A A G L+ G +H G V N L++MYA
Sbjct: 386 VYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYA 445
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTG-CAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
KS I+ A +VF + ++DVVSW+SM+ G C H +A + +F ML + + PN VTF+
Sbjct: 446 KSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA-LYYFRYMLGH-VKPNSVTFI 503
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
L+AC+ G L G+ A + + G+ E +DL + G
Sbjct: 504 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 196/406 (48%), Gaps = 4/406 (0%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ + N +L+ + G + A ++F +MP +D+ +W ++ GY + E A+ L+ +ML
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G++P+ +T VL+ G G D + GR+VHA L++G+ V V ++L+ MYA+ +
Sbjct: 191 AGMRPDVYTFPCVLRTCG-GIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F + + +SWNA+IAGH E E L F ML +P + +SV A
Sbjct: 250 AARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
+ K +H +K G + N+L+ MY G + DA K+F+R+ +D +SW +
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M++G ++G + + M + ++P+ VT L AC+ G LD G L + G
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL-GACRMHKNVELGAYA 385
+++ ++ +D+A++ + M E W +++ G C H++ E Y
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFEALYYF 488
Query: 386 AERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKE 431
+ + P +S I + A+ G L + G+ E
Sbjct: 489 RYMLGHVKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE 533
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 318/560 (56%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ +HA L + + ++L+ YAKCG L A+++FDEMP V WTALI+
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y A+ + G++P+ FT VL A A D G V + G
Sbjct: 626 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC-ARIADLATGETVWRAAEQEGVAQ 684
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+V ++ +D+Y + +M A +F + K+ V+W A++ G+A +AL F M
Sbjct: 685 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 744
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG +P ++ + +A G+L+ G+ V +G L+DMYAK GS
Sbjct: 745 AEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 804
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ K+D++ WN+M+ G G K +M ++G+ N TF+ +L +C+
Sbjct: 805 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 864
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+ +G+ YF M K + + P HY VDLL RAGLL A + + +MP+ A +
Sbjct: 865 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL 924
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLG C++H+N EL + +++ L+P +SG +++L+NIY++ GR DAA+ R MK
Sbjct: 925 GALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAK 984
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
GV+K PACSWVE + VH F D +HP I+KK E+ ++K +GY P + V+
Sbjct: 985 GVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDV 1044
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ +E+E L HSEKLA+AF L+ T PG TI + KN+RVC DCH+A K S++ REIIV
Sbjct: 1045 EDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIV 1104
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH FRDG CSC DYW
Sbjct: 1105 RDNNRFHCFRDGSCSCNDYW 1124
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+ T+ LK++ + G Q+HA LK N +V +SLL +YA+ + A
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + + V W ALI + + +A+ G P F+ V TA A
Sbjct: 606 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 665
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L G+ V + G FV VD+Y K G + A +VF+++ +D V+W +M+
Sbjct: 666 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 725
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
G A +G + + F M G+ P+ L+AC+ G LD G+
Sbjct: 726 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGR 772
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/581 (39%), Positives = 335/581 (57%), Gaps = 23/581 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNT-----ILNAYAKCGCLDEARKLFDEMP-- 54
C+ L+ L R +HA+++ K+D N+ +++ YA + +AR++FD +P
Sbjct: 281 CSRLELLDVGREMHAYVI----KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 336
Query: 55 VKDMVTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFG 113
K + W A+I GY+Q E A+ LF++M G P + T++SVL A A + F
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC---ARSEAFA 393
Query: 114 RQ--VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
+ VH + +K G N +V ++L+DMYAR + D A +F ++ + VSWN LI G
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 453
Query: 172 RKSEGEKALRTFSEM--LREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ A + EM L EG P + ++ A + +GK +H + ++
Sbjct: 454 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT 513
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
VG+ LVDMYAK G + + VF+RL +R+ ++WN ++ HGLG F++M
Sbjct: 514 DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMT 573
Query: 289 RNGIA-PNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
+G A PN+VTF+ L ACSH+G++D G Q + A+ + HGVEP VD+LGRAG
Sbjct: 574 ASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGR 633
Query: 347 LDRALKFIREMPI-EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLAN 405
LD A + M E + W +LGACR+H+NV LG A ER+ EL+P ++ ++LL N
Sbjct: 634 LDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCN 693
Query: 406 IYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWRE 465
IY++AG+ AA R M+ GV KEP CSW+E A+H F+A + AHP +H
Sbjct: 694 IYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEA 753
Query: 466 ISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRV 525
+ ++ GY PD+S VL D ++ A L+ HSEKLA+AF L+ PG+TI + KN+RV
Sbjct: 754 LWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRV 813
Query: 526 CGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
C DCH A KF SK+V REI++RD RFHHFR+G CSCGDYW
Sbjct: 814 CNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 180/355 (50%), Gaps = 11/355 (3%)
Query: 31 NTILNAYAKCGCLDEARKLF-DEMPVK-DMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
N +L+ YA+ G + +A++LF P + D+VTW ++S Q+ + A+ M+ LG
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG-YDWNVYVGSSLLDMYARFDQMDD 147
++P+ T +S L A D GR++HA+ +K N +V S+L+DMYA +Q+
Sbjct: 267 VRPDGVTFASALPACSRLELLD-VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGK 325
Query: 148 AWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTA 204
A +F + K WNA+I G+A+ E+ALR F+ M E GF P + +SV A
Sbjct: 326 ARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPA 385
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A + + + VH +V+K G FV N L+DMYA+ G + A ++F + DVVSW
Sbjct: 386 CARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSW 445
Query: 265 NSMLTGCAQHG-LGKA--TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
N+++TGC G + A R +++ G+ PN +T + +L C+ G+
Sbjct: 446 NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGY 505
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+H ++ + A VD+ + G L + +P T W L+ A MH
Sbjct: 506 AVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNT-ITWNVLIMAYGMH 559
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 202/435 (46%), Gaps = 19/435 (4%)
Query: 5 LKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDMVT 60
L+ + AR +HA L G + A+ N +L AYA+CG L A ++F + D V+
Sbjct: 70 LRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVS 129
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG---AGATDDKFGRQVH 117
+ +LIS + ++A+ ML G FTL SVL+A A A + GR+ H
Sbjct: 130 FNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAH 189
Query: 118 AFCLKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALES--KNEVSWNALIAGHARK 173
AF LK G + + ++LL MYAR + DA LF + V+WN +++ +
Sbjct: 190 AFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS 249
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--F 231
++A++T +M+ G P +++S A + L+ G+ +HA+VIK +L A F
Sbjct: 250 GMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKD-DELAANSF 308
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKM-L 288
V + LVDMYA + A +VF+ + + + WN+M+ G AQ G+ + +R F +M
Sbjct: 309 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 368
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
G P + T VL AC+ + + + K G+ +D+ R G D
Sbjct: 369 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 428
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIY 407
A + I M P W L+ C + +V A + +L+ P+ I L +
Sbjct: 429 VARR-IFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL 487
Query: 408 ASAGRLNDAARARKM 422
L AR +++
Sbjct: 488 PGCAILAAPARGKEI 502
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 168/375 (44%), Gaps = 68/375 (18%)
Query: 103 SGAGATDDKFGRQVHAFCLKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALE--SK 158
S A D + R +HA L+ G + + V ++LL YAR ++ A +F ++ +
Sbjct: 66 SAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAH 125
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL----ASTGSLEQG 214
+ VS+N+LI+ + AL ML G T F+ SV A+ A+ ++ G
Sbjct: 126 DAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLG 185
Query: 215 KWVHAHVIKSG----GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL--KRDVVSWNSML 268
+ HA +K+G Q AF N L+ MYA+ G + DA+++F + DVV+WN+M+
Sbjct: 186 REAHAFALKNGLLHGHQRFAF--NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 243
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+ Q G+ V+ M+ G+ P+ VTF L ACS LLD G+ A
Sbjct: 244 SVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHA-------- 295
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
YV I++ + + V AL+ H+ V A +
Sbjct: 296 -----YV------------------IKDDELAANSFVASALVDMYATHEQVG----KARQ 328
Query: 389 IFELDPHDSGPHILLANI----YASAGRLNDAARA-RKMMKESG-VKKE-------PACS 435
+F++ P DSG + + N YA AG +A R +M E+G V E PAC+
Sbjct: 329 VFDMVP-DSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 387
Query: 436 WVET---KNAVHMFV 447
E K AVH +V
Sbjct: 388 RSEAFAGKEAVHGYV 402
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 307/554 (55%), Gaps = 42/554 (7%)
Query: 54 PVKDMVTWTALISGYSQ-NDQP----ENAIILFSQMLRLGLKPNQFTLSSVLKASGAGAT 108
P + W LI + Q QP + I +F +M G++P+ T +L+ S A +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQ-SFASPS 78
Query: 109 DDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYAR----------FDQM------------- 145
GR VHA L++G + +V +SL+ MY+ FD++
Sbjct: 79 LLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIIN 138
Query: 146 --------DDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGF---EPT 194
D A LF + +N +SW+ +I G+ R + ++AL F EM G P
Sbjct: 139 ANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPN 198
Query: 195 HFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFN 254
F+ S V A G+LE GKW HA++ K G + +G L+DMYAK GS+E A VF+
Sbjct: 199 EFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 258
Query: 255 RL-LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLD 313
L +DV++W++M++G A HGL + V F KM+ G+ PN VTFL V AC H GL+
Sbjct: 259 NLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 318
Query: 314 EGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
EG+ Y M + + + P HY VDL GRAG + A ++ MP+EP VWGALL
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 378
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEP 432
RMH ++E A +++ EL+P +SG ++LL+N+YA GR D R +M+ G+KK P
Sbjct: 379 SRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVP 438
Query: 433 ACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQERE 492
CS +E +H F DD+HP+ IH EI E++K GYV ++ VL D++ +E
Sbjct: 439 GCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKE 498
Query: 493 AKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRF 552
L +HSEKLALA+ + T PG+ I I KN+R+C DCH A K SKV +REIIVRD NRF
Sbjct: 499 LALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRF 558
Query: 553 HHFRDGFCSCGDYW 566
HHF G CSC DYW
Sbjct: 559 HHFTQGLCSCRDYW 572
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 154/260 (59%), Gaps = 11/260 (4%)
Query: 24 KNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQ 83
+ D+ N+I+NA + G +D AR LF MP +++++W+ +I+GY + Q + A+ LF +
Sbjct: 127 QPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFRE 186
Query: 84 MLRLG---LKPNQFTLSSVLKASG-AGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMY 139
M LG ++PN+FT+S VL A G GA + G+ HA+ K G +V +G++L+DMY
Sbjct: 187 MQMLGVNDVRPNEFTMSGVLAACGRLGALEH--GKWAHAYIDKCGMPVDVVLGTALIDMY 244
Query: 140 ARFDQMDDAWFLFTAL-ESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSY 198
A+ ++ A ++F+ L +K+ ++W+A+I+G A E+ + FS+M+ +G P ++
Sbjct: 245 AKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTF 304
Query: 199 SSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGN--TLVDMYAKSGSIEDAEKVFNRL 256
+VF A G + +GK + + ++ + + +VD+Y ++G I++A V +
Sbjct: 305 LAVFCACVHGGLVSEGK-DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSM 363
Query: 257 -LKRDVVSWNSMLTGCAQHG 275
++ DV+ W ++L+G HG
Sbjct: 364 PMEPDVLVWGALLSGSRMHG 383
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVT 60
C L L+ + HA+I D+ + +++ YAKCG +++A +F + P KD++
Sbjct: 209 CGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMA 268
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
W+A+ISG + + E + LFS+M+ G++PN T +V A G + +
Sbjct: 269 WSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMT 328
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEV-SWNALIAG---HARKSEG 176
Y + ++D+Y R ++ +AW + ++ + +V W AL++G H
Sbjct: 329 EDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETC 388
Query: 177 EKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKW 216
E AL+ E+ EPT+ S + L++ + ++G+W
Sbjct: 389 ELALKKLIEL-----EPTN---SGAYVLLSNVYA-KRGRW 419
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/581 (39%), Positives = 335/581 (57%), Gaps = 23/581 (3%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNT-----ILNAYAKCGCLDEARKLFDEMP-- 54
C+ L+ L R +HA+++ K+D N+ +++ YA + +AR++FD +P
Sbjct: 283 CSRLELLDVGREMHAYVI----KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 338
Query: 55 VKDMVTWTALISGYSQNDQPENAIILFSQM-LRLGLKPNQFTLSSVLKASGAGATDDKFG 113
K + W A+I GY+Q E A+ LF++M G P + T++SVL A A + F
Sbjct: 339 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC---ARSEAFA 395
Query: 114 RQ--VHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHA 171
+ VH + +K G N +V ++L+DMYAR + D A +F ++ + VSWN LI G
Sbjct: 396 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 455
Query: 172 RKSEGEKALRTFSEM--LREG-FEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQL 228
+ A + EM L EG P + ++ A + +GK +H + ++
Sbjct: 456 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT 515
Query: 229 VAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKML 288
VG+ LVDMYAK G + + VF+RL +R+ ++WN ++ HGLG F++M
Sbjct: 516 DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMT 575
Query: 289 RNGIA-PNQVTFLCVLTACSHAGLLDEG-QGYFALMKKHGVEPEEAHYVTFVDLLGRAGL 346
+G A PN+VTF+ L ACSH+G++D G Q + A+ + HGVEP VD+LGRAG
Sbjct: 576 ASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGR 635
Query: 347 LDRALKFIREMPI-EPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLAN 405
LD A + M E + W +LGACR+H+NV LG A ER+ EL+P ++ ++LL N
Sbjct: 636 LDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCN 695
Query: 406 IYASAGRLNDAARARKMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWRE 465
IY++AG+ AA R M+ GV KEP CSW+E A+H F+A + AHP +H
Sbjct: 696 IYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEA 755
Query: 466 ISEKIKQIGYVPDSSHVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRV 525
+ ++ GY PD+S VL D ++ A L+ HSEKLA+AF L+ PG+TI + KN+RV
Sbjct: 756 LWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRV 815
Query: 526 CGDCHSAFKFASKVVEREIIVRDTNRFHHFRDGFCSCGDYW 566
C DCH A KF SK+V REI++RD RFHHFR+G CSCGDYW
Sbjct: 816 CNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 180/355 (50%), Gaps = 11/355 (3%)
Query: 31 NTILNAYAKCGCLDEARKLF-DEMPVK-DMVTWTALISGYSQNDQPENAIILFSQMLRLG 88
N +L+ YA+ G + +A++LF P + D+VTW ++S Q+ + A+ M+ LG
Sbjct: 209 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 268
Query: 89 LKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG-YDWNVYVGSSLLDMYARFDQMDD 147
++P+ T +S L A D GR++HA+ +K N +V S+L+DMYA +Q+
Sbjct: 269 VRPDGVTFASALPACSRLELLD-VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGK 327
Query: 148 AWFLFTAL--ESKNEVSWNALIAGHARKSEGEKALRTFSEMLRE-GFEPTHFSYSSVFTA 204
A +F + K WNA+I G+A+ E+ALR F+ M E GF P + +SV A
Sbjct: 328 ARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPA 387
Query: 205 LASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSW 264
A + + + VH +V+K G FV N L+DMYA+ G + A ++F + DVVSW
Sbjct: 388 CARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSW 447
Query: 265 NSMLTGCAQHG-LGKA--TVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFAL 321
N+++TGC G + A R +++ G+ PN +T + +L C+ G+
Sbjct: 448 NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGY 507
Query: 322 MKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMH 376
+H ++ + A VD+ + G L + +P T W L+ A MH
Sbjct: 508 AVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNT-ITWNVLIMAYGMH 561
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 202/435 (46%), Gaps = 19/435 (4%)
Query: 5 LKKLKEARIVHAHIL--GSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM--PVKDMVT 60
L+ + AR +HA L G + A+ N +L AYA+CG L A ++F + D V+
Sbjct: 72 LRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVS 131
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG---AGATDDKFGRQVH 117
+ +LIS + ++A+ ML G FTL SVL+A A A + GR+ H
Sbjct: 132 FNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAH 191
Query: 118 AFCLKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALES--KNEVSWNALIAGHARK 173
AF LK G + + ++LL MYAR + DA LF + V+WN +++ +
Sbjct: 192 AFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS 251
Query: 174 SEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVA--F 231
++A++T +M+ G P +++S A + L+ G+ +HA+VIK +L A F
Sbjct: 252 GMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKD-DELAANSF 310
Query: 232 VGNTLVDMYAKSGSIEDAEKVFNRLLK--RDVVSWNSMLTGCAQHGLGKATVRWFEKM-L 288
V + LVDMYA + A +VF+ + + + WN+M+ G AQ G+ + +R F +M
Sbjct: 311 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 370
Query: 289 RNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLD 348
G P + T VL AC+ + + + K G+ +D+ R G D
Sbjct: 371 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 430
Query: 349 RALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPH-ILLANIY 407
A + I M P W L+ C + +V A + +L+ P+ I L +
Sbjct: 431 VARR-IFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL 489
Query: 408 ASAGRLNDAARARKM 422
L AR +++
Sbjct: 490 PGCAILAAPARGKEI 504
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 168/375 (44%), Gaps = 68/375 (18%)
Query: 103 SGAGATDDKFGRQVHAFCLKYG--YDWNVYVGSSLLDMYARFDQMDDAWFLFTALE--SK 158
S A D + R +HA L+ G + + V ++LL YAR ++ A +F ++ +
Sbjct: 68 SAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAH 127
Query: 159 NEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTAL----ASTGSLEQG 214
+ VS+N+LI+ + AL ML G T F+ SV A+ A+ ++ G
Sbjct: 128 DAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLG 187
Query: 215 KWVHAHVIKSG----GQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL--KRDVVSWNSML 268
+ HA +K+G Q AF N L+ MYA+ G + DA+++F + DVV+WN+M+
Sbjct: 188 REAHAFALKNGLLHGHQRFAF--NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 245
Query: 269 TGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHGVE 328
+ Q G+ V+ M+ G+ P+ VTF L ACS LLD G+ A
Sbjct: 246 SVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHA-------- 297
Query: 329 PEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAAER 388
YV I++ + + V AL+ H+ V A +
Sbjct: 298 -----YV------------------IKDDELAANSFVASALVDMYATHEQVG----KARQ 330
Query: 389 IFELDPHDSGPHILLANI----YASAGRLNDAARA-RKMMKESG-VKKE-------PACS 435
+F++ P DSG + + N YA AG +A R +M E+G V E PAC+
Sbjct: 331 VFDMVP-DSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 389
Query: 436 WVET---KNAVHMFV 447
E K AVH +V
Sbjct: 390 RSEAFAGKEAVHGYV 404
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 333/556 (59%), Gaps = 4/556 (0%)
Query: 14 VHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQ 73
VHAHI+ S + ++ +LN G + R++F +P D +T+LI S++
Sbjct: 31 VHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHN 90
Query: 74 PE-NAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVG 132
++ +S+M+ + P+ +T +SV+K S A + K GR VH L +G+ +VYV
Sbjct: 91 FSIYSLYFYSRMVLSNVSPSNYTFTSVIK-SCADLSALKHGRVVHGHVLVHGFGLDVYVQ 149
Query: 133 SSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFE 192
++L+ +Y + + +A +F + ++ V+WN++I+G+ + ++A+ F M G E
Sbjct: 150 AALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVE 209
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P ++ SV +A A G+ G WVH +++ +G L +G +L++MY + G++ A +V
Sbjct: 210 PDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREV 269
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F+ + +R+VV+W +M++G +G G V F +M RNG+ PN +TF+ VL+AC+HAGL+
Sbjct: 270 FDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLV 329
Query: 313 DEGQGYFA-LMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIRE-MPIEPTAAVWGALL 370
+EG+ FA + +++ + P H V VD+LGRAGLLD A FI+E +P P A+ A+L
Sbjct: 330 NEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAML 389
Query: 371 GACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKK 430
GAC+MHKN +LGA AE + +P + +++L+NIYA AGR++ R M +KK
Sbjct: 390 GACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKK 449
Query: 431 EPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQE 490
+ S VE ++F D +H + I+ E+ K + GYVP S V+ +++E
Sbjct: 450 QVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEE 509
Query: 491 REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTN 550
RE L+ HSEKLA+AF L+ T G+ I I KN+R+C DCHSA KF S + REIIVRD
Sbjct: 510 REYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKL 569
Query: 551 RFHHFRDGFCSCGDYW 566
RFHHF+ G CSC DYW
Sbjct: 570 RFHHFKVGSCSCLDYW 585
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 147/278 (52%), Gaps = 8/278 (2%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L LK R+VH H+L F D+ +Q ++ Y KCG L ARK+FD++ + +V W
Sbjct: 121 CADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAW 180
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASG-AGATDDKFGRQVHAFC 120
++ISGY QN + AI LF +M G++P+ T SVL A GA G VH +
Sbjct: 181 NSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFS--LGCWVHEYI 238
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+ G D NV +G+SL++MY R + A +F +++ +N V+W A+I+G+ G +A+
Sbjct: 239 VGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAV 298
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNT--LVD 238
F EM R G P ++ +V +A A G + +G+ + A I+ LV V + LVD
Sbjct: 299 ELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFAS-IREEYHLVPGVEHNVCLVD 357
Query: 239 MYAKSGSIEDAEKVFNRLLKRDVVS--WNSMLTGCAQH 274
M ++G +++A + + +ML C H
Sbjct: 358 MLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMH 395
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 334/567 (58%), Gaps = 3/567 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C HL+ L A+ ++ ++L + F + ++N +++ YAKCG + AR +F+ M KD V+W
Sbjct: 317 CGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
++ISGY Q+ A+ LF M+ + + + T ++ S A D KFG+ +H+ +
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLA-DLKFGKGLHSNGI 435
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G ++ V ++L+DMYA+ ++ D+ +F ++ + + V+WN +I+ R + L+
Sbjct: 436 KSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQ 495
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++M + P ++ AS + GK +H +++ G + +GN L++MY+
Sbjct: 496 VTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G +E + +VF R+ +RDVV+W M+ +G G+ + F M ++GI P+ V F+
Sbjct: 556 KCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIA 615
Query: 302 VLTACSHAGLLDEGQGYFALMKKH-GVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360
++ ACSH+GL+++G F MK H ++P HY VDLL R+ + +A +FI+ MPIE
Sbjct: 616 LIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIE 675
Query: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420
P A++W ++L ACR ++E + RI EL+P D G IL +N YA+ + + + R
Sbjct: 676 PDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIR 735
Query: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480
K +++ +KK P SW+E VH+F + DD+ PQ IHK + + + GY+PDS
Sbjct: 736 KSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSR 795
Query: 481 HVLSYADQQEREAKLQV-HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKV 539
V +++E + +L HSE+LA+AF L++T PG+ + + KN+RVC DCH K SK+
Sbjct: 796 EVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKI 855
Query: 540 VEREIIVRDTNRFHHFRDGFCSCGDYW 566
V REI+VRD NRFH F+DG CSC D W
Sbjct: 856 VGREILVRDANRFHLFKDGICSCKDRW 882
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 201/372 (54%), Gaps = 3/372 (0%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C L + +V+ IL F++D+ + N +++ Y++ G L AR++FDEMPV+D+V+W
Sbjct: 116 CAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSW 175
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
+LISGYS + E A+ ++ ++ + P+ FT+SSVL A A K G+ +H F L
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAF-ANLLVVKQGQGLHGFTL 234
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G + V + LL MY +F + DA +F + ++ V++N +I G+ + E++++
Sbjct: 235 KSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVK 294
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
F E L + F+P + +SV A L K+++ +++++G L + V N L+D+YA
Sbjct: 295 MFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYA 353
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLC 301
K G + A VFN + +D VSWNS+++G Q G ++ F+ M+ + +T+L
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Query: 302 VLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEP 361
+++ + L G+G + K G+ + + +D+ + G + +LK M
Sbjct: 414 LISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLD 473
Query: 362 TAAVWGALLGAC 373
T W ++ AC
Sbjct: 474 TVT-WNTVISAC 484
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 184/366 (50%), Gaps = 4/366 (1%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEM-PVKDMVTWTALIS 66
L E R +HA ++ +++ Y+ + +F + P K++ W ++I
Sbjct: 20 LNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIR 79
Query: 67 GYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYD 126
+S+N A+ + ++ + P+++T SV+KA AG D + G V+ L+ G++
Sbjct: 80 AFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC-AGLFDAEMGDLVYKQILEMGFE 138
Query: 127 WNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM 186
++YVG++L+DMY+R + A +F + ++ VSWN+LI+G++ E+AL + E+
Sbjct: 139 SDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 187 LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSI 246
P F+ SSV A A+ ++QG+ +H +KSG V+ V N L+ MY K
Sbjct: 199 RNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRP 258
Query: 247 EDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTAC 306
DA +VF+ ++ RD V++N+M+ G + + + +V+ F + L + P+ +T VL AC
Sbjct: 259 TDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENL-DQFKPDILTVTSVLCAC 317
Query: 307 SHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H L + + M + G E +D+ + G + A M + T + W
Sbjct: 318 GHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVS-W 376
Query: 367 GALLGA 372
+++
Sbjct: 377 NSIISG 382
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 194 THFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVF 253
T S + + AL+S+ +L + + +HA VI G F L+D Y+ + + VF
Sbjct: 3 TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62
Query: 254 NRLLK-RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
R+ ++V WNS++ +++G + ++ K+ + ++P++ TF V+ AC AGL
Sbjct: 63 RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLF 120
Query: 313 DEGQGYFALMKKHGVEPEEAHYV--TFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALL 370
D G + + E YV VD+ R GLL RA + EMP+ + W +L+
Sbjct: 121 DAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVS-WNSLI 179
Query: 371 GACRMHKNVE 380
H E
Sbjct: 180 SGYSSHGYYE 189
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 318/560 (56%), Gaps = 2/560 (0%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L+ +HA L + + ++L+ YAKCG L A+++FDEMP V WTALI+
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y A+ + G++P+ FT VL A A D G V + G
Sbjct: 602 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC-ARIADLATGETVWRAAEQEGVAQ 660
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEML 187
+V+V ++ +D+Y + +M A +F + K+ V+W A++ G+A +AL F M
Sbjct: 661 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 720
Query: 188 REGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIE 247
EG +P ++ + +A G+L+ G+ V +G L+DMYAK GS
Sbjct: 721 AEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 780
Query: 248 DAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACS 307
+A VF ++ K+D++ WN+M+ G G K +M ++G+ N TF+ +L +C+
Sbjct: 781 EAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCT 840
Query: 308 HAGLLDEGQGYFALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVW 366
H GL+ +G+ YF M K + + P HY VDLL RAGLL A + + +MP+ A +
Sbjct: 841 HTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVIL 900
Query: 367 GALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKES 426
GALLG C++H+N EL + +++ L+P +SG +++L+NIY++ GR DAA+ R MK
Sbjct: 901 GALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAK 960
Query: 427 GVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYA 486
GV+K PACSWVE + VH F D +HP I+KK E+ ++K +GY P + V+
Sbjct: 961 GVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDV 1020
Query: 487 DQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIV 546
+ +E+E L HSEKLA+AF L+ T PG TI + KN+RVC DCH+A K S++ REIIV
Sbjct: 1021 EDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIV 1080
Query: 547 RDTNRFHHFRDGFCSCGDYW 566
RD NRFH FRDG CSC DYW
Sbjct: 1081 RDNNRFHCFRDGSCSCNDYW 1100
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%)
Query: 90 KPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAW 149
P+ T+ LK++ + G Q+HA LK N +V +SLL +YA+ + A
Sbjct: 522 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 581
Query: 150 FLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALASTG 209
+F + + V W ALI + + +A+ G P F+ V TA A
Sbjct: 582 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 641
Query: 210 SLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLT 269
L G+ V + G FV VD+Y K G + A +VF+++ +D V+W +M+
Sbjct: 642 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 701
Query: 270 GCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQ 316
G A +G + + F M G+ P+ L+AC+ G LD G+
Sbjct: 702 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGR 748
>gi|357478705|ref|XP_003609638.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510693|gb|AES91835.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 589
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 335/566 (59%), Gaps = 22/566 (3%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L A HA+++ S ND N ++N+Y K +D A KLFDEM ++V+W+ L++G
Sbjct: 39 LPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAG 98
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
Y + QP A+ LF QM + PN+FT S+++ A A + GR++HA +GY
Sbjct: 99 YVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSILANLET-GRRIHALVEVFGYRS 157
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEM- 186
++ V SSL+DMY + +++D+A +F + +N VSW ++I +++ +G AL+ F E
Sbjct: 158 DLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFN 217
Query: 187 -LREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGS 245
+R +P HF S TA AS G L GK H VI+ G V + LVDMYAK G
Sbjct: 218 HIRMN-KPNHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGC 276
Query: 246 IEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTA 305
+ ++KVF R++ VV + SM+ G A++GLG ++R F++M+ I PN +TF+ VL
Sbjct: 277 VTYSDKVFRRIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVL-- 334
Query: 306 CSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPI--EPTA 363
+ ++ +K+GV P+ HY VD+LGR G +D A + + + + E A
Sbjct: 335 ----------HLFNSMNEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDA 384
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
+WG LL A R+H V++ A+ R+ E + + ++ L+N YA AG +A R M
Sbjct: 385 LLWGTLLSASRLHGRVDIAIEASNRVIESNQQVAAAYVTLSNTYALAGDWENAHNLRSEM 444
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAH-PQRAMIHKKWREISEKIKQIGYVPDSSHV 482
K +GV KEP SW+E K++ ++F A D + Q+ + RE+ ++K+ G+V ++
Sbjct: 445 KRTGVYKEPGSSWIEIKDSTYLFHAGDLSKCSQKRELLSLLRELEGRMKERGHVGVTTG- 503
Query: 483 LSYADQQE--REAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540
L + D +E +E + +HSEKLALAF L++TP G TI I KN+R+C DCH AFK S +V
Sbjct: 504 LVFVDVEEEAKEEIVSLHSEKLALAFGLLNTPKGITIIIMKNLRMCRDCHEAFKLISDIV 563
Query: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566
ERE +VRD NRFHHF++G C+CGD+W
Sbjct: 564 EREFVVRDVNRFHHFKNGSCTCGDFW 589
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 140/278 (50%), Gaps = 17/278 (6%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C+ L L+ R +HA + +++D+ + +++++ Y KC +DEA+ +FD M V+++V+W
Sbjct: 134 CSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSW 193
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
T++I+ YSQN Q A+ LF + + + KPN F L S + A + G+ H
Sbjct: 194 TSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTACASLGRLGS-GKITHGVV 252
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
++ G+D + V S+L+DMYA+ + + +F + + + V + ++I G A+ G +L
Sbjct: 253 IRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYTSMIVGAAKYGLGTLSL 312
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240
R F EM+ +P ++ V S K G A +VDM
Sbjct: 313 RLFQEMVDRRIKPNSITFVGVLHLFNSMNE------------KYGVMPDARHYTCIVDML 360
Query: 241 AKSGSIEDAEKVFNRLL---KRDVVSWNSMLTGCAQHG 275
+ G I++A ++ + + D + W ++L+ HG
Sbjct: 361 GRVGRIDEAYQLAQSVQVGSEDDALLWGTLLSASRLHG 398
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/549 (37%), Positives = 322/549 (58%), Gaps = 9/549 (1%)
Query: 26 DIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQML 85
D + T+L YA+ L AR FD + D+V+W A+ + Y Q+ +P A++LF +ML
Sbjct: 254 DNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERML 313
Query: 86 RLGLKPNQFTLSSVLKASGA--GATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFD 143
G++P+ T + L A A T G+++ + + G + + V ++ L+MYA+
Sbjct: 314 LEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCG 373
Query: 144 QMDDAWFLFTALES--KNEVSWNALIAGHARKSEGEKALRTFSEMLREGF-EPTHFSYSS 200
+ DA +F + ++ ++WN+++A + G++A F M E +P ++ +
Sbjct: 374 SLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVA 433
Query: 201 VFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLL--K 258
V A S S+ QG+ +HA V+ +G + + N L++MYAK GS++DA+ +F++ +
Sbjct: 434 VLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQ 493
Query: 259 RDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGY 318
DV++W S++ G AQ+G + ++ F M + G+ PN +TF+ LTAC+H G L++G
Sbjct: 494 EDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCEL 553
Query: 319 FALMKK-HGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHK 377
+ M HG+ P H+ VDLLGR G LD A K + E + W ALL AC+ K
Sbjct: 554 LSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVITWMALLDACKNSK 612
Query: 378 NVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMMKESGVKKEPACSWV 437
+E G AERI +LDP + +I+LA++YA+AGR N+AA RK M + G++ +P CS V
Sbjct: 613 ELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAV 672
Query: 438 ETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVLSYADQQEREAKLQV 497
E +H F A D +HP+ I+ + + IK GYV D+ VL Q+ +E L
Sbjct: 673 EVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMR 732
Query: 498 HSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVEREIIVRDTNRFHHFRD 557
HSEKLA+AF L+STP GS + + KN+RVC DCH+A K SKV R+I++RD++R+HHF
Sbjct: 733 HSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTS 792
Query: 558 GFCSCGDYW 566
G CSCGDYW
Sbjct: 793 GTCSCGDYW 801
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 192/395 (48%), Gaps = 34/395 (8%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP---VKDM 58
C+ L L R +H+ I F+ + + N +++ Y+KCG L +A++ FD +P +D+
Sbjct: 17 CSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDV 76
Query: 59 VTWTALISGYSQNDQPENAIILFSQMLRLGL-KPNQFTLSSVLKAS-GAGATDDKFGRQV 116
VTW A+IS + +N A+ LF M G PN T SVL + AG + R +
Sbjct: 77 VTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAI 136
Query: 117 HAFCLKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNE------VSWNALIAGH 170
H + G + +V ++L+D Y + +DDAW +F L +E V+ +A+I+
Sbjct: 137 HGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF--LRKSDEEPSTSLVTCSAMISAC 194
Query: 171 ARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTA--LASTGSLEQGKWVHAHVIKSGGQL 228
+ +++LR F M EG +P+ + SV A + GS A V++ ++
Sbjct: 195 WQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGS------ATAFVLEQAMEV 248
Query: 229 VA-----FVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRW 283
V+ +G TL+ YA+S + A F+ + DVVSWN+M QH + +
Sbjct: 249 VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVL 308
Query: 284 FEKMLRNGIAPNQVTFLCVLTACS-----HAGLLDEGQGYFALMKKHGVEPEEAHYVTFV 338
FE+ML G+ P+ TF+ LTAC+ A + G+ +L+++ G+E + A +
Sbjct: 309 FERMLLEGVRPSVATFITALTACAAYPPQTASAI--GKRIQSLLEEAGLEGDTAVANATL 366
Query: 339 DLLGRAG-LLDRALKFIREMPIEPTAAVWGALLGA 372
++ + G L D F R P W ++L A
Sbjct: 367 NMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 36/267 (13%)
Query: 8 LKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISG 67
L +AR V I S + D N++L AY G EA +LF M + +V
Sbjct: 375 LADARAVFERI--SPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLV-------- 424
Query: 68 YSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDW 127
KPN+ T +VL AS T GR++HA + G++
Sbjct: 425 ----------------------KPNKVTFVAVLDAS-TSRTSIAQGREIHARVVSNGFES 461
Query: 128 NVYVGSSLLDMYARFDQMDDAWFLFTALESKNE--VSWNALIAGHARKSEGEKALRTFSE 185
+ + ++LL+MYA+ +DDA +F S E ++W +L+AG+A+ + E+AL+ F
Sbjct: 462 DTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWT 521
Query: 186 MLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVG-NTLVDMYAKSG 244
M ++G P H ++ S TA G LEQG + + + G + A + +VD+ + G
Sbjct: 522 MQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCG 581
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGC 271
+++AEK+ R + DV++W ++L C
Sbjct: 582 RLDEAEKLLERTSQADVITWMALLDAC 608
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 8/223 (3%)
Query: 3 THLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPV--KDMVT 60
T + + R +HA ++ + F++D +QN +LN YAKCG LD+A+ +FD+ +D++
Sbjct: 439 TSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIA 498
Query: 61 WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120
WT+L++GY+Q Q E A+ LF M + G++PN T S L A G ++ +
Sbjct: 499 WTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMT 558
Query: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180
+G S ++D+ R ++D+A L + ++W AL+ E E+
Sbjct: 559 PDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKNSKELERGE 618
Query: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIK 223
R +++ +P +S + LAS + G+W A I+
Sbjct: 619 RCAERIMQ--LDP---EVASSYIVLASMYA-AAGRWNEAATIR 655
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P + ++ A + G+L G+ +H+ + + + +GN L+ MY+K GS+ DA++
Sbjct: 5 PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64
Query: 253 FNRL---LKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGI-APNQVTFLCVLTACSH 308
F+RL KRDVV+WN+M++ ++G + ++ F M +G PN VTF+ VL +C
Sbjct: 65 FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124
Query: 309 AGL--LDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALK-FIREMPIEPTAAV 365
AGL L++ + + G+E E VD G+ G LD A + F+R+ EP+ ++
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184
Query: 366 --WGALLGAC 373
A++ AC
Sbjct: 185 VTCSAMISAC 194
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 328/560 (58%), Gaps = 4/560 (0%)
Query: 5 LKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTAL 64
L L A+ +HA + F D+A N+++ Y+ G + EA +F M +D ++WTA+
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAM 368
Query: 65 ISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYG 124
ISGY +N P+ A+ +++ M + P+ T++S L A + D G ++H G
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLD-VGIKLHELATSKG 427
Query: 125 YDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFS 184
+ + V ++L++MYA+ ++ A +F + K+ +SW+++IAG + +AL F
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFR 487
Query: 185 EMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSG 244
ML + +P ++ + A A+TGSL GK +HAHV++ G +V N L+D+Y K G
Sbjct: 488 HMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCG 546
Query: 245 SIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLT 304
A F +DVVSWN ML G HG G + +F +ML G P++VTF+ +L
Sbjct: 547 QTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLC 606
Query: 305 ACSHAGLLDEGQGYF-ALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTA 363
CS AG++ +G F ++ +K+ + P HY VDLL R G L FI MPI P A
Sbjct: 607 GCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDA 666
Query: 364 AVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARARKMM 423
AVWGALL CR+H+N+ELG AA+ + EL+P+D+G H+LL+++YA AG + ++ RK M
Sbjct: 667 AVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTM 726
Query: 424 KESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSSHVL 483
+ G++ + CSWVE K A+H F+ +D++HPQ I+ I E++K G+ P S+ L
Sbjct: 727 RVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSL 786
Query: 484 SYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVVERE 543
+ ++ L HSE+LA+AF LI+T PG++I + KN C CH + SK+V RE
Sbjct: 787 E-DKEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRRE 845
Query: 544 IIVRDTNRFHHFRDGFCSCG 563
I VRDT FHHFRDG CSCG
Sbjct: 846 ITVRDTKEFHHFRDGSCSCG 865
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 190/345 (55%), Gaps = 4/345 (1%)
Query: 2 CTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTW 61
C + L R VHAH+L ++ + N ++ YAKCG ++ ARK+FD M + D ++W
Sbjct: 205 CGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISW 264
Query: 62 TALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCL 121
A+I+G+ +N + E + LF ML ++PN T++SV ASG +D F +++HA +
Sbjct: 265 NAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL-LSDLDFAKEIHALAV 323
Query: 122 KYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKALR 181
K G+ +V +SL+ MY+ +M +A +F+ +E+++ +SW A+I+G+ + +KAL
Sbjct: 324 KRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALE 383
Query: 182 TFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYA 241
++ M P + +S A AS G L+ G +H G V N LV+MYA
Sbjct: 384 VYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYA 443
Query: 242 KSGSIEDAEKVFNRLLKRDVVSWNSMLTG-CAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300
KS IE A +VF + +DV+SW+SM+ G C H +A + +F ML + + PN VTF+
Sbjct: 444 KSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEA-LYYFRHMLAD-VKPNSVTFI 501
Query: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAG 345
L AC+ G L G+ A + + G+ E +DL + G
Sbjct: 502 AALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCG 546
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 1/369 (0%)
Query: 27 IAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVTWTALISGYSQNDQPENAIILFSQMLR 86
+ + N +L+ + G A K+F +MP +D+ +W ++ GY + E A+ L+ +ML
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188
Query: 87 LGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFCLKYGYDWNVYVGSSLLDMYARFDQMD 146
G +P+ +T VL++ G G D GR+VHA L++G V V ++L+ MYA+ ++
Sbjct: 189 AGARPDVYTFPCVLRSCG-GVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVE 247
Query: 147 DAWFLFTALESKNEVSWNALIAGHARKSEGEKALRTFSEMLREGFEPTHFSYSSVFTALA 206
A +F + + +SWNA+IAGH E E L F ML + EP + +SV A
Sbjct: 248 AARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASG 307
Query: 207 STGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKRDVVSWNS 266
L+ K +HA +K G N+L+ MY+ G + +A VF+R+ RD +SW +
Sbjct: 308 LLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTA 367
Query: 267 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLLDEGQGYFALMKKHG 326
M++G ++G + + M N ++P+ VT L AC+ G LD G L G
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKG 427
Query: 327 VEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGACRMHKNVELGAYAA 386
V++ ++ ++++A++ + MP + + + G C HKN E Y
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFR 487
Query: 387 ERIFELDPH 395
+ ++ P+
Sbjct: 488 HMLADVKPN 496
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 5/231 (2%)
Query: 193 PTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKV 252
P +Y ++F + E G H + G +GN ++ M + G A KV
Sbjct: 92 PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKV 151
Query: 253 FNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 312
F ++ +RDV SWN M+ G + G + + + +ML G P+ TF CVL +C L
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDL 211
Query: 313 DEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIEPTAAVWGALLGA 372
G+ A + + G+ E V + + G ++ A K M + + W A++
Sbjct: 212 TMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCIS-WNAMIAG 270
Query: 373 CRMHKNVELGAYAAERIFELDPHDSGPHIL-LANIYASAGRLNDAARARKM 422
+ E G E + + P+++ + ++ ++G L+D A+++
Sbjct: 271 HFENHECEAG---LELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEI 318
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,965,583,624
Number of Sequences: 23463169
Number of extensions: 371527848
Number of successful extensions: 1066942
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10247
Number of HSP's successfully gapped in prelim test: 1984
Number of HSP's that attempted gapping in prelim test: 877497
Number of HSP's gapped (non-prelim): 62512
length of query: 566
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 418
effective length of database: 8,886,646,355
effective search space: 3714618176390
effective search space used: 3714618176390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)