Query 047073
Match_columns 316
No_of_seqs 122 out of 1430
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 12:39:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047073.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047073hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 4.7E-11 1.6E-15 76.5 2.7 45 36-80 6-50 (53)
2 2e31_A FBS1, F-box only protei 99.0 1.2E-10 4.1E-15 100.9 4.3 51 36-86 48-99 (297)
3 4asc_A Kelch repeat and BTB do 99.0 8.1E-08 2.8E-12 84.6 20.9 171 123-313 95-283 (315)
4 2woz_A Kelch repeat and BTB do 98.9 2E-07 6.8E-12 82.2 21.9 155 140-313 79-237 (318)
5 4asc_A Kelch repeat and BTB do 98.9 3E-07 1E-11 80.9 23.0 154 140-313 68-227 (315)
6 2woz_A Kelch repeat and BTB do 98.9 2.2E-07 7.6E-12 81.8 20.1 171 123-313 106-293 (318)
7 3ii7_A Kelch-like protein 7; p 98.9 3.3E-07 1.1E-11 80.2 20.1 174 123-314 98-279 (306)
8 2xn4_A Kelch-like protein 2; s 98.9 3.6E-07 1.2E-11 79.8 20.2 169 124-313 59-235 (302)
9 2vpj_A Kelch-like protein 12; 98.9 4.8E-07 1.6E-11 78.9 21.0 171 123-314 109-285 (301)
10 2xn4_A Kelch-like protein 2; s 98.8 3.5E-07 1.2E-11 79.9 19.4 172 123-313 105-282 (302)
11 1zgk_A Kelch-like ECH-associat 98.8 7.9E-07 2.7E-11 78.0 21.5 171 123-314 118-294 (308)
12 3ii7_A Kelch-like protein 7; p 98.8 4.4E-07 1.5E-11 79.4 18.6 165 126-313 11-184 (306)
13 2vpj_A Kelch-like protein 12; 98.8 7E-07 2.4E-11 77.8 19.8 169 124-313 60-237 (301)
14 1zgk_A Kelch-like ECH-associat 98.8 4E-07 1.4E-11 79.8 17.8 155 138-313 89-246 (308)
15 2uvk_A YJHT; unknown function, 98.7 1.2E-06 3.9E-11 78.4 18.4 172 124-313 17-234 (357)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.7 6.6E-06 2.3E-10 75.5 23.0 50 36-85 16-65 (445)
17 1p22_A F-BOX/WD-repeat protein 98.5 3.2E-06 1.1E-10 77.4 15.0 46 38-83 10-59 (435)
18 3v7d_B Cell division control p 98.4 8.1E-05 2.8E-09 68.3 24.1 45 38-82 14-59 (464)
19 2uvk_A YJHT; unknown function, 98.4 1E-05 3.6E-10 72.1 15.3 156 139-313 168-348 (357)
20 2zwa_A Leucine carboxyl methyl 98.3 2.4E-05 8.1E-10 76.5 16.3 160 125-302 396-574 (695)
21 3l2o_B F-box only protein 4; s 97.9 2.4E-06 8.3E-11 73.3 1.0 51 38-88 4-54 (312)
22 2zwa_A Leucine carboxyl methyl 97.8 0.00045 1.5E-08 67.5 14.9 132 125-262 499-644 (695)
23 2ast_B S-phase kinase-associat 97.6 2E-05 6.8E-10 69.6 1.8 42 36-77 6-47 (336)
24 1k3i_A Galactose oxidase precu 97.5 0.00029 9.8E-09 68.3 9.3 152 140-313 167-329 (656)
25 1k3i_A Galactose oxidase precu 97.4 0.00059 2E-08 66.1 9.6 121 126-259 197-329 (656)
26 2p1m_B Transport inhibitor res 97.1 0.00012 4.2E-09 69.6 1.3 36 37-72 4-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.00097 3.3E-08 63.4 1.3 33 40-72 14-47 (592)
28 1q7f_A NHL, brain tumor CG1071 89.0 8.6 0.00029 31.7 16.7 150 123-303 128-280 (286)
29 3nol_A Glutamine cyclotransfer 85.1 16 0.00054 30.6 16.9 110 126-261 52-164 (262)
30 2iwa_A Glutamine cyclotransfer 84.2 18 0.0006 30.4 16.3 113 125-261 30-144 (266)
31 4aez_A CDC20, WD repeat-contai 83.3 22 0.00076 30.9 15.8 135 138-303 112-248 (401)
32 2z2n_A Virginiamycin B lyase; 82.5 19 0.00064 29.4 17.5 115 121-261 104-220 (299)
33 4e54_B DNA damage-binding prot 81.8 19 0.00065 31.9 12.4 149 125-303 130-282 (435)
34 3m0c_C LDL receptor, low-densi 81.4 43 0.0015 32.9 16.9 136 126-291 482-621 (791)
35 4gga_A P55CDC, cell division c 80.5 29 0.001 30.4 17.0 146 124-303 114-261 (420)
36 3mbr_X Glutamine cyclotransfer 76.0 32 0.0011 28.4 16.8 110 126-261 30-142 (243)
37 2z2n_A Virginiamycin B lyase; 74.6 33 0.0011 27.9 16.9 137 121-290 146-284 (299)
38 3p5b_L Low density lipoprotein 72.2 52 0.0018 29.0 13.0 113 123-259 210-327 (400)
39 1rwi_B Serine/threonine-protei 69.4 42 0.0014 26.9 14.7 147 124-304 116-265 (270)
40 3dsm_A Uncharacterized protein 69.1 52 0.0018 27.8 15.2 124 121-261 89-221 (328)
41 2qc5_A Streptogramin B lactona 68.8 45 0.0015 27.0 17.1 116 120-261 24-141 (300)
42 4ggc_A P55CDC, cell division c 68.2 48 0.0016 27.1 15.2 67 124-208 34-100 (318)
43 2hes_X YDR267CP; beta-propelle 66.0 59 0.002 27.3 11.5 153 126-303 164-328 (330)
44 3jrp_A Fusion protein of prote 65.9 59 0.002 27.3 14.7 141 138-303 32-191 (379)
45 3vl1_A 26S proteasome regulato 65.4 66 0.0023 27.7 15.8 53 243-304 312-366 (420)
46 2fp8_A Strictosidine synthase; 65.4 60 0.0021 27.2 15.8 137 139-303 165-313 (322)
47 3fvz_A Peptidyl-glycine alpha- 64.5 63 0.0022 27.2 16.7 141 139-302 69-226 (329)
48 3jro_A Fusion protein of prote 64.4 69 0.0023 30.8 12.1 100 138-254 30-133 (753)
49 3nok_A Glutaminyl cyclase; bet 64.4 63 0.0021 27.0 16.6 107 125-261 63-173 (268)
50 3mbr_X Glutamine cyclotransfer 64.0 47 0.0016 27.3 9.3 70 221-300 21-91 (243)
51 1ri6_A Putative isomerase YBHE 62.9 64 0.0022 26.6 11.3 51 197-252 60-114 (343)
52 1l0q_A Surface layer protein; 62.6 72 0.0025 27.1 14.1 97 138-257 11-109 (391)
53 2ojh_A Uncharacterized protein 61.4 60 0.0021 25.9 13.5 136 138-302 21-159 (297)
54 1n7d_A LDL receptor, low-densi 61.2 86 0.003 30.1 12.0 112 125-259 463-577 (699)
55 3u4y_A Uncharacterized protein 59.7 73 0.0025 26.3 13.0 103 196-303 197-304 (331)
56 2qc5_A Streptogramin B lactona 59.2 69 0.0024 25.8 17.8 112 124-261 112-225 (300)
57 3m0c_C LDL receptor, low-densi 58.9 1.4E+02 0.0047 29.2 14.4 109 122-254 521-633 (791)
58 3g4e_A Regucalcin; six bladed 58.2 78 0.0027 26.1 14.9 110 123-254 21-140 (297)
59 1ddw_A GLGF-domain protein hom 58.1 27 0.00092 25.4 6.0 41 138-184 10-51 (120)
60 3dsm_A Uncharacterized protein 57.6 86 0.0029 26.4 16.1 114 125-261 52-170 (328)
61 3p5b_L Low density lipoprotein 57.6 99 0.0034 27.1 17.5 136 126-291 170-309 (400)
62 1k8k_C P40, ARP2/3 complex 41 57.2 85 0.0029 26.2 13.6 150 123-302 16-172 (372)
63 1n7d_A LDL receptor, low-densi 56.9 99 0.0034 29.7 11.6 80 166-261 542-623 (699)
64 3dr2_A Exported gluconolactona 56.5 84 0.0029 26.0 12.7 104 139-264 169-277 (305)
65 3dwl_C Actin-related protein 2 56.4 76 0.0026 26.8 10.0 149 124-302 20-176 (377)
66 4ggc_A P55CDC, cell division c 55.9 81 0.0028 25.6 14.8 144 138-304 171-316 (318)
67 3hfq_A Uncharacterized protein 55.7 90 0.0031 26.1 14.6 159 121-303 146-317 (347)
68 1ri6_A Putative isomerase YBHE 55.6 85 0.0029 25.8 16.0 155 124-303 137-308 (343)
69 1q7f_A NHL, brain tumor CG1071 54.1 86 0.0029 25.3 18.6 115 124-261 86-202 (286)
70 3nol_A Glutamine cyclotransfer 53.9 45 0.0015 27.8 7.5 66 224-300 46-113 (262)
71 1p22_A F-BOX/WD-repeat protein 53.5 1.1E+02 0.0039 26.6 14.7 93 138-256 192-288 (435)
72 3lrv_A PRE-mRNA-splicing facto 52.9 1E+02 0.0035 25.8 14.0 153 120-304 88-245 (343)
73 1egx_A VAsp, vasodilator-stimu 52.6 24 0.00084 25.3 5.0 44 138-184 10-53 (115)
74 3ei3_B DNA damage-binding prot 52.0 1.1E+02 0.0037 25.9 17.7 138 138-303 95-236 (383)
75 3o4h_A Acylamino-acid-releasin 51.7 1.1E+02 0.0038 28.0 10.8 110 126-257 122-231 (582)
76 3hrp_A Uncharacterized protein 51.5 1.3E+02 0.0043 26.5 16.3 152 121-299 136-294 (409)
77 3amr_A 3-phytase; beta-propell 51.1 1.3E+02 0.0043 26.4 15.1 143 139-302 99-262 (355)
78 3v65_B Low-density lipoprotein 50.8 1.2E+02 0.0043 26.3 17.6 135 125-291 169-307 (386)
79 1ijq_A LDL receptor, low-densi 50.8 1.1E+02 0.0038 25.6 14.1 113 121-254 126-239 (316)
80 1l0q_A Surface layer protein; 50.5 1.2E+02 0.0039 25.8 16.1 113 121-258 37-152 (391)
81 3u4y_A Uncharacterized protein 50.0 1.1E+02 0.0036 25.2 15.0 145 125-303 8-160 (331)
82 3v64_C Agrin; beta propeller, 49.1 1.3E+02 0.0043 25.8 18.3 139 121-291 122-264 (349)
83 4g56_B MGC81050 protein; prote 48.8 1.2E+02 0.0042 25.7 14.3 113 121-255 145-260 (357)
84 2ojh_A Uncharacterized protein 48.2 1E+02 0.0035 24.4 14.2 154 121-302 47-203 (297)
85 3q7m_A Lipoprotein YFGL, BAMB; 47.3 1.3E+02 0.0045 25.5 17.0 126 126-290 239-367 (376)
86 3q7m_A Lipoprotein YFGL, BAMB; 46.8 1.3E+02 0.0046 25.4 17.4 55 196-255 197-260 (376)
87 1evh_A WH1 domain, protein (ME 46.7 39 0.0013 24.1 5.2 43 138-184 10-52 (112)
88 2kwv_A RAD30 homolog B, DNA po 46.6 11 0.00036 22.2 1.7 20 38-57 20-39 (48)
89 3v65_B Low-density lipoprotein 46.4 1.5E+02 0.005 25.8 17.4 105 126-257 87-194 (386)
90 3fvz_A Peptidyl-glycine alpha- 45.9 1.3E+02 0.0045 25.1 19.2 163 123-304 151-323 (329)
91 1i2h_A PSD-ZIP45(homer-1C/VESL 45.6 44 0.0015 25.8 5.7 41 138-184 15-56 (168)
92 1ijq_A LDL receptor, low-densi 45.4 1.3E+02 0.0046 25.1 19.0 140 122-291 84-227 (316)
93 3vgz_A Uncharacterized protein 45.0 1.3E+02 0.0045 24.8 17.1 114 127-261 197-312 (353)
94 3scy_A Hypothetical bacterial 44.2 1.4E+02 0.0048 25.0 10.6 96 197-304 27-130 (361)
95 3fm0_A Protein CIAO1; WDR39,SG 43.4 1.5E+02 0.005 24.9 13.5 154 121-302 22-180 (345)
96 2pm9_A Protein WEB1, protein t 40.5 1.7E+02 0.0058 24.8 12.5 145 138-303 135-294 (416)
97 3v64_C Agrin; beta propeller, 39.3 1.8E+02 0.0061 24.8 17.5 106 126-258 44-152 (349)
98 3bws_A Protein LP49; two-domai 38.7 1.9E+02 0.0064 24.8 15.3 112 123-256 177-295 (433)
99 1rwi_B Serine/threonine-protei 38.4 1.5E+02 0.005 23.5 18.9 111 123-259 74-186 (270)
100 2xyi_A Probable histone-bindin 37.3 2.1E+02 0.0071 24.9 10.4 140 138-303 203-353 (430)
101 2dg1_A DRP35, lactonase; beta 37.2 1.7E+02 0.0059 24.0 15.4 120 124-259 53-177 (333)
102 2aq5_A Coronin-1A; WD40 repeat 37.0 2E+02 0.0067 24.6 15.8 161 119-305 135-301 (402)
103 4ery_A WD repeat-containing pr 36.8 1.7E+02 0.0058 23.8 17.0 137 138-303 128-268 (312)
104 4a0p_A LRP6, LRP-6, low-densit 36.3 2.8E+02 0.0095 26.1 18.4 135 122-291 87-226 (628)
105 2qe8_A Uncharacterized protein 35.6 2E+02 0.0068 24.2 9.6 74 225-301 71-152 (343)
106 4h5i_A Guanine nucleotide-exch 35.4 2.1E+02 0.007 24.3 14.8 156 121-303 182-343 (365)
107 4g56_B MGC81050 protein; prote 35.2 2E+02 0.007 24.2 14.1 137 138-304 203-344 (357)
108 4gga_A P55CDC, cell division c 34.3 2.3E+02 0.0077 24.4 13.4 144 138-304 251-396 (420)
109 1gxr_A ESG1, transducin-like e 33.6 1.9E+02 0.0065 23.4 15.7 132 138-303 162-296 (337)
110 2ovr_B FBW7, F-BOX/WD repeat p 33.2 2.4E+02 0.0082 24.4 17.8 56 196-256 338-394 (445)
111 1yiq_A Quinohemoprotein alcoho 33.0 3.2E+02 0.011 25.9 12.6 120 125-261 69-202 (689)
112 4gqb_B Methylosome protein 50; 32.8 2.2E+02 0.0076 24.0 16.0 110 123-255 135-248 (344)
113 1nir_A Nitrite reductase; hemo 32.7 2.9E+02 0.0099 25.2 17.5 67 229-303 334-402 (543)
114 3nok_A Glutaminyl cyclase; bet 31.4 1.3E+02 0.0046 25.0 6.9 65 222-299 56-121 (268)
115 4a0p_A LRP6, LRP-6, low-densit 31.0 3.4E+02 0.012 25.5 18.1 103 128-256 8-114 (628)
116 3bg1_A Protein SEC13 homolog; 30.6 2.3E+02 0.0077 23.3 10.8 74 123-211 21-95 (316)
117 3odt_A Protein DOA1; ubiquitin 29.3 2.2E+02 0.0074 22.7 14.1 42 126-174 29-70 (313)
118 3v7d_B Cell division control p 29.0 2.8E+02 0.0097 24.0 17.7 132 138-302 331-462 (464)
119 1kv9_A Type II quinohemoprotei 29.0 3.7E+02 0.013 25.3 12.6 119 125-260 65-196 (668)
120 3hrp_A Uncharacterized protein 28.7 2.9E+02 0.01 24.0 17.2 158 121-301 225-408 (409)
121 3jro_A Fusion protein of prote 27.8 4E+02 0.014 25.3 11.6 66 127-207 67-133 (753)
122 4aez_A CDC20, WD repeat-contai 27.8 2.8E+02 0.0097 23.6 15.1 138 138-304 238-381 (401)
123 2be1_A Serine/threonine-protei 27.3 87 0.003 27.1 5.3 55 196-255 66-132 (339)
124 1qks_A Cytochrome CD1 nitrite 27.2 2.7E+02 0.0094 25.8 9.1 109 126-261 166-284 (567)
125 2bf6_A Sialidase, EXO-alpha-si 26.8 3.3E+02 0.011 24.2 9.4 115 197-313 187-334 (449)
126 3jrp_A Fusion protein of prote 26.6 2.7E+02 0.0092 22.9 16.2 21 282-303 267-287 (379)
127 1kb0_A Quinohemoprotein alcoho 26.3 4.2E+02 0.014 25.0 12.3 120 125-261 76-209 (677)
128 3tc9_A Hypothetical hydrolase; 26.1 3.4E+02 0.012 23.9 16.1 146 122-301 144-299 (430)
129 3ott_A Two-component system se 25.8 4.3E+02 0.015 25.0 12.3 113 121-261 477-594 (758)
130 1ugj_A Riken cDNA 2310057J16 p 25.6 1.3E+02 0.0045 22.4 5.2 78 125-211 54-133 (141)
131 1npe_A Nidogen, entactin; glyc 25.3 2.6E+02 0.0088 22.2 17.5 147 121-299 85-234 (267)
132 3qqz_A Putative uncharacterize 25.3 2.6E+02 0.0088 22.9 7.7 66 229-302 184-250 (255)
133 3sov_A LRP-6, low-density lipo 25.1 3E+02 0.01 23.0 18.5 137 122-290 86-226 (318)
134 2p4o_A Hypothetical protein; p 24.9 2.9E+02 0.0098 22.6 18.5 108 125-254 41-148 (306)
135 3sov_A LRP-6, low-density lipo 24.1 3.2E+02 0.011 22.9 17.5 108 125-256 45-157 (318)
136 2dg1_A DRP35, lactonase; beta 24.0 2.5E+02 0.0085 23.0 7.7 28 228-259 54-81 (333)
137 3bws_A Protein LP49; two-domai 23.8 3.4E+02 0.012 23.1 15.6 136 138-303 282-432 (433)
138 2iwa_A Glutamine cyclotransfer 23.8 3.1E+02 0.011 22.6 9.3 57 230-298 32-90 (266)
139 3dwl_C Actin-related protein 2 23.6 3.2E+02 0.011 22.7 9.4 26 123-150 63-88 (377)
140 1kv9_A Type II quinohemoprotei 23.3 3.6E+02 0.012 25.4 9.4 31 223-258 60-92 (668)
141 1pjx_A Dfpase, DIISOPROPYLFLUO 22.8 3E+02 0.01 22.1 16.3 107 138-258 45-166 (314)
142 2dk7_A Transcription elongatio 22.8 60 0.0021 21.2 2.5 15 138-152 29-43 (73)
143 3dm0_A Maltose-binding peripla 22.8 4.7E+02 0.016 24.3 15.5 100 138-256 493-595 (694)
144 2pm7_B Protein transport prote 22.0 3.1E+02 0.011 22.1 14.3 76 122-212 16-92 (297)
145 3vl1_A 26S proteasome regulato 21.3 3.7E+02 0.013 22.7 16.3 67 123-207 147-213 (420)
146 1pgu_A Actin interacting prote 21.0 4.5E+02 0.015 23.5 18.7 142 138-302 182-327 (615)
147 3mkq_A Coatomer beta'-subunit; 20.9 5.3E+02 0.018 24.3 14.0 149 119-299 59-213 (814)
148 4gqb_B Methylosome protein 50; 20.9 3.7E+02 0.013 22.5 16.7 136 138-303 191-331 (344)
149 1kb0_A Quinohemoprotein alcoho 20.6 3.7E+02 0.012 25.4 8.8 31 223-258 71-103 (677)
150 2p4o_A Hypothetical protein; p 20.6 3.3E+02 0.011 22.2 7.8 29 229-261 42-70 (306)
151 2sli_A Intramolecular trans-si 20.6 5.6E+02 0.019 24.4 10.7 111 197-314 426-553 (679)
152 1nir_A Nitrite reductase; hemo 20.5 4.8E+02 0.017 23.7 13.7 110 125-261 147-266 (543)
153 3sjl_D Methylamine dehydrogena 20.1 4.4E+02 0.015 23.1 11.1 128 124-261 235-372 (386)
154 3qqz_A Putative uncharacterize 20.1 3.6E+02 0.012 22.0 9.5 28 230-261 39-66 (255)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.07 E-value=4.7e-11 Score=76.53 Aligned_cols=45 Identities=36% Similarity=0.631 Sum_probs=39.0
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccccccccchhhhhhcCCHHHHH
Q 047073 36 NVSMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAK 80 (316)
Q Consensus 36 ~~~~~~LP~dll~~IL~rLP~~sl~r~r~VcK~W~sli~s~~F~~ 80 (316)
...+..||+|++.+||.+||++++.++++|||+|+.++.++.|-+
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 445788999999999999999999999999999999999988754
No 2
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.03 E-value=1.2e-10 Score=100.89 Aligned_cols=51 Identities=22% Similarity=0.493 Sum_probs=47.7
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccc-cccccchhhhhhcCCHHHHHHHHhcC
Q 047073 36 NVSMEDLPLPILVDVFSRLPIKTIL-QIKCVCKTWHSLCSDPYFAKIHLARA 86 (316)
Q Consensus 36 ~~~~~~LP~dll~~IL~rLP~~sl~-r~r~VcK~W~sli~s~~F~~~~~~~~ 86 (316)
...+..||+||+.+||++||+++|+ +|++|||+|++++.++.|.+.++.+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 3567889999999999999999999 99999999999999999999998776
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.98 E-value=8.1e-08 Score=84.57 Aligned_cols=171 Identities=15% Similarity=0.103 Sum_probs=113.5
Q ss_pred eccCceEEeeeec------cCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCC
Q 047073 123 SSCNGLICLHEFS------YKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSK 196 (316)
Q Consensus 123 ~s~~Gll~~~~~~------~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~ 196 (316)
...+|.|++.++. .....++++||.|++|..++++|. .+...... .++ -+|+.+.....+. ...
T Consensus 95 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~~-----~~iyv~GG~~~~~---~~~ 164 (315)
T 4asc_A 95 GEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY-VVYGHTVL-SHM-----DLVYVIGGKGSDR---KCL 164 (315)
T ss_dssp EEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEE-EET-----TEEEEECCBCTTS---CBC
T ss_pred EEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC-cccceeEE-EEC-----CEEEEEeCCCCCC---ccc
Confidence 3446776655431 114579999999999999998876 33332222 222 1455554331211 446
Q ss_pred CeEEEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccc
Q 047073 197 PQVEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINS 275 (316)
Q Consensus 197 ~~~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~ 275 (316)
..+++|+..+++|+.++.+|... .....+.++|.+|.+++..... ...+.+||+++++|+.++-.|... ..
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-------~~ 236 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTAR-SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER-------SS 236 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC-------BS
T ss_pred ceEEEEeCCCCeEEECCCCCCch-hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcc-------cc
Confidence 78999999999999998776543 2334677899999998764332 347999999999999994324433 34
Q ss_pred eEEEEECCeEEEEEccCC-----------CeEEEEEEeeCCCCCCeeeE
Q 047073 276 ISVGVSGGFLYLCDGFLE-----------PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 276 ~~L~~~~G~L~lv~~~~~-----------~~~~vW~l~~~~~~~~W~~~ 313 (316)
..++..+|+|+++..... ..-+||+.+- + +..|++.
T Consensus 237 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~-~-~~~W~~~ 283 (315)
T 4asc_A 237 LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNE-E-EKKWEGV 283 (315)
T ss_dssp CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET-T-TTEEEEE
T ss_pred eeEEEECCEEEEECCccccCcCCccccccccCcEEEecC-C-CChhhhh
Confidence 467788999999876421 2346888853 2 3469875
No 4
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.94 E-value=2e-07 Score=82.17 Aligned_cols=155 Identities=13% Similarity=0.150 Sum_probs=102.8
Q ss_pred eEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCcee
Q 047073 140 IISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPYVL 219 (316)
Q Consensus 140 ~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~~~ 219 (316)
.++++||.|++|..+|++|. .+...... .+ +. +|+.++.....+. .....+++|+..+++|+.++.+|...
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~----~~-~iyv~GG~~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r 149 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPS-ARCLFGLG-EV----DD-KIYVVAGKDLQTE--ASLDSVLCYDPVAAKWSEVKNLPIKV 149 (318)
T ss_dssp EEEEEETTTTEEEECSCBSS-CBCSCEEE-EE----TT-EEEEEEEEBTTTC--CEEEEEEEEETTTTEEEEECCCSSCE
T ss_pred cEEEEeCCCCcEEECCCCCc-cccccceE-EE----CC-EEEEEcCccCCCC--cccceEEEEeCCCCCEeECCCCCCcc
Confidence 38999999999999998876 33332221 12 12 4555544321111 34567999999999999998777654
Q ss_pred ccCCcceeeCCeEEEEEecCCCC--ccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEECCeEEEEEccCC--Ce
Q 047073 220 NQPYYGAFLNSALHWYAHSHDKR--TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLE--PN 295 (316)
Q Consensus 220 ~~~~~~v~~~G~lywl~~~~~~~--~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~--~~ 295 (316)
. ....+.++|.+|.+++..... ...+..||+.+++|+.++-.|... .....+..+|+|+++....+ ..
T Consensus 150 ~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~~~~ 221 (318)
T 2woz_A 150 Y-GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-------SMFGVAIHKGKIVIAGGVTEDGLS 221 (318)
T ss_dssp E-SCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-------BSCEEEEETTEEEEEEEEETTEEE
T ss_pred c-ccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-------ccceEEEECCEEEEEcCcCCCCcc
Confidence 3 233577999999998753221 346999999999999984224333 33456778999999876432 23
Q ss_pred EEEEEEeeCCCCCCeeeE
Q 047073 296 LDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 296 ~~vW~l~~~~~~~~W~~~ 313 (316)
-++|+.+- . +..|++.
T Consensus 222 ~~~~~yd~-~-~~~W~~~ 237 (318)
T 2woz_A 222 ASVEAFDL-K-TNKWEVM 237 (318)
T ss_dssp EEEEEEET-T-TCCEEEC
T ss_pred ceEEEEEC-C-CCeEEEC
Confidence 46777743 2 3469875
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.94 E-value=3e-07 Score=80.87 Aligned_cols=154 Identities=13% Similarity=0.119 Sum_probs=104.5
Q ss_pred eEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeec-ccccCCCCCeEEEEEeCCCceEecCCCCce
Q 047073 140 IISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKD-QAAISSSKPQVEVHTIGTNTWRNIGDLPYV 218 (316)
Q Consensus 140 ~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~-~~~~~~~~~~~~vy~s~t~~W~~~~~~~~~ 218 (316)
.++++||.|++|..+|++|. .+...... .+ +. +|+.++.... ++. .....+++|+..+++|+.++.+|..
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~----~~-~lyv~GG~~~~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~ 138 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPS-PRCLFGLG-EA----LN-SIYVVGGREIKDGE--RCLDSVMCYDRLSFKWGESDPLPYV 138 (315)
T ss_dssp EEEEEETTTTEEEECCCBSS-CEESCEEE-EE----TT-EEEEECCEESSTTC--CBCCCEEEEETTTTEEEECCCCSSC
T ss_pred ceEEecCCCCeEEECCCCCc-chhceeEE-EE----CC-EEEEEeCCcCCCCC--cccceEEEECCCCCcEeECCCCCCc
Confidence 48999999999999999876 33332221 11 12 4555543321 111 4577899999999999999877654
Q ss_pred eccCCcceeeCCeEEEEEecCCCC--ccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEECCeEEEEEccCC--
Q 047073 219 LNQPYYGAFLNSALHWYAHSHDKR--TAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVSGGFLYLCDGFLE-- 293 (316)
Q Consensus 219 ~~~~~~~v~~~G~lywl~~~~~~~--~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~-- 293 (316)
. .....+.++|.+|.+++..... ...+.+||+.+++|+.+ ++ |... .....+..+|+|+++....+
T Consensus 139 r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r-------~~~~~~~~~~~iyv~GG~~~~~ 209 (315)
T 4asc_A 139 V-YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTAR-------SLFGATVHDGRIIVAAGVTDTG 209 (315)
T ss_dssp C-BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCC-------BSCEEEEETTEEEEEEEECSSS
T ss_pred c-cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCch-------hceEEEEECCEEEEEeccCCCC
Confidence 3 2333677999999998763221 45799999999999988 34 4332 34456788999999886533
Q ss_pred CeEEEEEEeeCCCCCCeeeE
Q 047073 294 PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 294 ~~~~vW~l~~~~~~~~W~~~ 313 (316)
..-++|+.+- . +..|+..
T Consensus 210 ~~~~~~~yd~-~-~~~W~~~ 227 (315)
T 4asc_A 210 LTSSAEVYSI-T-DNKWAPF 227 (315)
T ss_dssp EEEEEEEEET-T-TTEEEEE
T ss_pred ccceEEEEEC-C-CCeEEEC
Confidence 2446788753 2 3469875
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.89 E-value=2.2e-07 Score=81.84 Aligned_cols=171 Identities=16% Similarity=0.190 Sum_probs=111.8
Q ss_pred eccCceEEeeeecc-----CCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCC
Q 047073 123 SSCNGLICLHEFSY-----KQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKP 197 (316)
Q Consensus 123 ~s~~Gll~~~~~~~-----~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~ 197 (316)
...+|.|.+.++.. ....++++||.|++|..++++|. .+....... ++ -+|+.+.....+. ....
T Consensus 106 ~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~-~~-----~~iyv~GG~~~~~---~~~~ 175 (318)
T 2woz_A 106 GEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI-KVYGHNVIS-HN-----GMIYCLGGKTDDK---KCTN 175 (318)
T ss_dssp EEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS-CEESCEEEE-ET-----TEEEEECCEESSS---CBCC
T ss_pred EEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC-cccccEEEE-EC-----CEEEEEcCCCCCC---Cccc
Confidence 34467776665321 12579999999999999998876 333322221 21 2455554332221 3467
Q ss_pred eEEEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccce
Q 047073 198 QVEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSI 276 (316)
Q Consensus 198 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~ 276 (316)
.+++|+..+++|+.++.+|.... ....+.++|.+|.+++..... ...+.+||+++++|+.++-.|... ...
T Consensus 176 ~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-------~~~ 247 (318)
T 2woz_A 176 RVFIYNPKKGDWKDLAPMKTPRS-MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER-------SSI 247 (318)
T ss_dssp CEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC-------BSC
T ss_pred eEEEEcCCCCEEEECCCCCCCcc-cceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc-------cce
Confidence 89999999999999987765432 233577899999998754321 346889999999999983224433 334
Q ss_pred EEEEECCeEEEEEccCC-----------CeEEEEEEeeCCCCCCeeeE
Q 047073 277 SVGVSGGFLYLCDGFLE-----------PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 277 ~L~~~~G~L~lv~~~~~-----------~~~~vW~l~~~~~~~~W~~~ 313 (316)
.++..+|+|+++..... ..-++|+.+- . +..|++.
T Consensus 248 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~-~-~~~W~~~ 293 (318)
T 2woz_A 248 SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED-D-KKEWAGM 293 (318)
T ss_dssp EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEET-T-TTEEEEE
T ss_pred EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeC-C-CCEehhh
Confidence 67788999999875421 2457888853 2 3469875
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.86 E-value=3.3e-07 Score=80.18 Aligned_cols=174 Identities=11% Similarity=0.098 Sum_probs=112.3
Q ss_pred eccCceEEeeeec----cCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCe
Q 047073 123 SSCNGLICLHEFS----YKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQ 198 (316)
Q Consensus 123 ~s~~Gll~~~~~~----~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~ 198 (316)
...+|.|++..+. .....++++||.|++|..+|+++. .+...... .+ +. +|+.+...............
T Consensus 98 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~----~~-~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 98 CAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT-QRCSHGMV-EA----NG-LIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp EEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS-CCBSCEEE-EE----TT-EEEEECCEESCTTTCEECCC
T ss_pred EEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC-CcceeEEE-EE----CC-EEEEECCCCCCCCcccccce
Confidence 3446777665432 124579999999999999998876 33332221 22 12 45555433222100011678
Q ss_pred EEEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEe-cCCCCccccCCCCccce
Q 047073 199 VEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSI 276 (316)
Q Consensus 199 ~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~ 276 (316)
+++|+..++.|+.++.+|.... ....+.++|.||.+++..... ...+.+||+.+++|+.+ ++ |... ...
T Consensus 171 ~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r-------~~~ 241 (306)
T 3ii7_A 171 CEVYDPATETWTELCPMIEARK-NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKG-------VTV 241 (306)
T ss_dssp EEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCB-------SCC
T ss_pred EEEeCCCCCeEEECCCccchhh-cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCc-------cce
Confidence 9999999999999987765432 334677899999997653221 34699999999999998 44 4433 344
Q ss_pred EEEEECCeEEEEEccCC--CeEEEEEEeeCCCCCCeeeEE
Q 047073 277 SVGVSGGFLYLCDGFLE--PNLDIWIMKKYGVKESWTKEF 314 (316)
Q Consensus 277 ~L~~~~G~L~lv~~~~~--~~~~vW~l~~~~~~~~W~~~~ 314 (316)
.++..+|+|+++....+ ..-++|+.+- . +.+|+..-
T Consensus 242 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~-~-~~~W~~~~ 279 (306)
T 3ii7_A 242 KCAAVGSIVYVLAGFQGVGRLGHILEYNT-E-TDKWVANS 279 (306)
T ss_dssp EEEEETTEEEEEECBCSSSBCCEEEEEET-T-TTEEEEEE
T ss_pred eEEEECCEEEEEeCcCCCeeeeeEEEEcC-C-CCeEEeCC
Confidence 66778999999987532 3346777753 2 34698753
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.86 E-value=3.6e-07 Score=79.80 Aligned_cols=169 Identities=12% Similarity=0.155 Sum_probs=109.7
Q ss_pred ccCceEEeeeec---cCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 124 SCNGLICLHEFS---YKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 124 s~~Gll~~~~~~---~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
..+|.|++.++. .....++++||.|++|..+|+++. .+...... .++ . +|+.+...... .....++
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~~----~-~iyv~GG~~~~----~~~~~~~ 127 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD-RRSTLGAA-VLN----G-LLYAVGGFDGS----TGLSSVE 127 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS-CCBSCEEE-EET----T-EEEEEEEECSS----CEEEEEE
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc-cccceEEE-EEC----C-EEEEEcCCCCC----ccCceEE
Confidence 346666655431 114579999999999999998876 33332222 121 2 45555443221 2346799
Q ss_pred EEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC---ccEEEEEeCCCceeeEecCCCCccccCCCCccceE
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR---TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSIS 277 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~---~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~ 277 (316)
+|+..++.|+.++.+|... .....+.++|.+|.+++..... ...+..||+.+++|+.++-.|... ....
T Consensus 128 ~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-------~~~~ 199 (302)
T 2xn4_A 128 AYNIKSNEWFHVAPMNTRR-SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR-------SGAG 199 (302)
T ss_dssp EEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-------BSCE
T ss_pred EEeCCCCeEeecCCCCCcc-cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-------cccc
Confidence 9999999999998776543 2233577899999997653221 346999999999999983224333 3346
Q ss_pred EEEECCeEEEEEccCC--CeEEEEEEeeCCCCCCeeeE
Q 047073 278 VGVSGGFLYLCDGFLE--PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 278 L~~~~G~L~lv~~~~~--~~~~vW~l~~~~~~~~W~~~ 313 (316)
++..+|+|+++....+ ..-++|+.+- . +..|++.
T Consensus 200 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~-~-~~~W~~~ 235 (302)
T 2xn4_A 200 VGVLNNLLYAVGGHDGPLVRKSVEVYDP-T-TNAWRQV 235 (302)
T ss_dssp EEEETTEEEEECCBSSSSBCCCEEEEET-T-TTEEEEE
T ss_pred EEEECCEEEEECCCCCCcccceEEEEeC-C-CCCEeeC
Confidence 6788999999986532 1235777743 2 3469875
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.86 E-value=4.8e-07 Score=78.86 Aligned_cols=171 Identities=12% Similarity=0.079 Sum_probs=112.5
Q ss_pred eccCceEEeeeec---cCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 123 SSCNGLICLHEFS---YKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 123 ~s~~Gll~~~~~~---~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
...+|.|.+..+. .....++++||.|++|..+++++. .+.... ...++ -+|+.+...... .....+
T Consensus 109 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~-~~~~~-----~~iyv~GG~~~~----~~~~~~ 177 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-AREGAG-LVVAS-----GVIYCLGGYDGL----NILNSV 177 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-CCBSCE-EEEET-----TEEEEECCBCSS----CBCCCE
T ss_pred EEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-Ccccce-EEEEC-----CEEEEECCCCCC----cccceE
Confidence 3347777666531 114579999999999999998765 333222 22221 245554432211 346789
Q ss_pred EEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccceEE
Q 047073 200 EVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISV 278 (316)
Q Consensus 200 ~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L 278 (316)
++|+..++.|+.++.+|.... ....+.++|.+|.+++..... ...+..||+++++|..++-.|... .....
T Consensus 178 ~~~d~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-------~~~~~ 249 (301)
T 2vpj_A 178 EKYDPHTGHWTNVTPMATKRS-GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR-------CYVGA 249 (301)
T ss_dssp EEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-------BSCEE
T ss_pred EEEeCCCCcEEeCCCCCcccc-cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc-------cceeE
Confidence 999999999999987665432 334677899999998764322 357999999999999984324433 33456
Q ss_pred EEECCeEEEEEccCC--CeEEEEEEeeCCCCCCeeeEE
Q 047073 279 GVSGGFLYLCDGFLE--PNLDIWIMKKYGVKESWTKEF 314 (316)
Q Consensus 279 ~~~~G~L~lv~~~~~--~~~~vW~l~~~~~~~~W~~~~ 314 (316)
+..+|+|+++....+ ..-+||+.+- . +..|+..-
T Consensus 250 ~~~~~~i~v~GG~~~~~~~~~v~~yd~-~-~~~W~~~~ 285 (301)
T 2vpj_A 250 TVLRGRLYAIAGYDGNSLLSSIECYDP-I-IDSWEVVT 285 (301)
T ss_dssp EEETTEEEEECCBCSSSBEEEEEEEET-T-TTEEEEEE
T ss_pred EEECCEEEEEcCcCCCcccccEEEEcC-C-CCeEEEcC
Confidence 778999999886532 3367888853 2 34698764
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.84 E-value=3.5e-07 Score=79.87 Aligned_cols=172 Identities=14% Similarity=0.080 Sum_probs=110.6
Q ss_pred eccCceEEeeeecc---CCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 123 SSCNGLICLHEFSY---KQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 123 ~s~~Gll~~~~~~~---~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
...+|.+++..+.. ....+.++||.|++|..+++++. .+..... ..++ -+|+.+........ .....+
T Consensus 105 ~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~-~~~~-----~~iyv~GG~~~~~~--~~~~~~ 175 (302)
T 2xn4_A 105 AVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT-RRSSVGV-GVVG-----GLLYAVGGYDVASR--QCLSTV 175 (302)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS-CCBSCEE-EEET-----TEEEEECCEETTTT--EECCCE
T ss_pred EEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC-cccCceE-EEEC-----CEEEEEeCCCCCCC--ccccEE
Confidence 33477776665321 13578999999999999998876 3333221 2221 24555543322211 225679
Q ss_pred EEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccceEE
Q 047073 200 EVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISV 278 (316)
Q Consensus 200 ~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L 278 (316)
++|+..+++|+.++.+|.... ....+.++|.+|.+++..... ...+..||+++++|+.++-.|... ....+
T Consensus 176 ~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-------~~~~~ 247 (302)
T 2xn4_A 176 ECYNATTNEWTYIAEMSTRRS-GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR-------RNAGV 247 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-------BSCEE
T ss_pred EEEeCCCCcEEECCCCccccc-cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-------ccCeE
Confidence 999999999999987765432 234677899999998654322 347999999999999984324333 33456
Q ss_pred EEECCeEEEEEccCC--CeEEEEEEeeCCCCCCeeeE
Q 047073 279 GVSGGFLYLCDGFLE--PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 279 ~~~~G~L~lv~~~~~--~~~~vW~l~~~~~~~~W~~~ 313 (316)
+..+|+|+++..... ..-+||+.+- + +..|+..
T Consensus 248 ~~~~~~i~v~GG~~~~~~~~~v~~yd~-~-~~~W~~~ 282 (302)
T 2xn4_A 248 CAVNGLLYVVGGDDGSCNLASVEYYNP-T-TDKWTVV 282 (302)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEET-T-TTEEEEC
T ss_pred EEECCEEEEECCcCCCcccccEEEEcC-C-CCeEEEC
Confidence 778999999876532 2345666643 2 3469864
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.83 E-value=7.9e-07 Score=77.95 Aligned_cols=171 Identities=11% Similarity=0.098 Sum_probs=111.9
Q ss_pred eccCceEEeeeec---cCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 123 SSCNGLICLHEFS---YKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 123 ~s~~Gll~~~~~~---~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
...+|-|++..+. .....+.++||.|++|..+++++. .+.... ...++ -+|+.+...... .....+
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~-~~~~~-----~~iyv~GG~~~~----~~~~~~ 186 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-RRIGVG-VAVLN-----RLLYAVGGFDGT----NRLNSA 186 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-CCBSCE-EEEET-----TEEEEECCBCSS----CBCCCE
T ss_pred EEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-cccceE-EEEEC-----CEEEEEeCCCCC----CcCceE
Confidence 3346777665431 114579999999999999998876 333322 22221 245555432221 236789
Q ss_pred EEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccceEE
Q 047073 200 EVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISV 278 (316)
Q Consensus 200 ~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L 278 (316)
++|+..++.|+.++.+|.... ....+.++|.||.+++..... ...+..||+++++|+.++-.|... ....+
T Consensus 187 ~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-------~~~~~ 258 (308)
T 1zgk_A 187 ECYYPERNEWRMITAMNTIRS-GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR-------SALGI 258 (308)
T ss_dssp EEEETTTTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC-------BSCEE
T ss_pred EEEeCCCCeEeeCCCCCCccc-cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc-------cceEE
Confidence 999999999999987765432 234677899999998654221 357999999999999884324333 33466
Q ss_pred EEECCeEEEEEccCC--CeEEEEEEeeCCCCCCeeeEE
Q 047073 279 GVSGGFLYLCDGFLE--PNLDIWIMKKYGVKESWTKEF 314 (316)
Q Consensus 279 ~~~~G~L~lv~~~~~--~~~~vW~l~~~~~~~~W~~~~ 314 (316)
+..+|+|+++..... ..-++|+++-. +..|++.-
T Consensus 259 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~ 294 (308)
T 1zgk_A 259 TVHQGRIYVLGGYDGHTFLDSVECYDPD--TDTWSEVT 294 (308)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETT--TTEEEEEE
T ss_pred EEECCEEEEEcCcCCCcccceEEEEcCC--CCEEeecC
Confidence 778999999876432 34467777532 34698763
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.79 E-value=4.4e-07 Score=79.36 Aligned_cols=165 Identities=11% Similarity=0.038 Sum_probs=108.5
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
.+.|++.++......++++||.+++|..++++|. .+...... .+ +. +|+.+.... . .....+++|+..
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~----~~-~lyv~GG~~-~----~~~~~~~~~d~~ 78 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFE-KRRDAACV-FW----DN-VVYILGGSQ-L----FPIKRMDCYNVV 78 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSC-CCBSCEEE-EE----TT-EEEEECCBS-S----SBCCEEEEEETT
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCc-ccceeEEE-EE----CC-EEEEEeCCC-C----CCcceEEEEeCC
Confidence 3555444422225689999999999999998876 33332222 12 12 344443322 1 456889999999
Q ss_pred CCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC--ccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEEC
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR--TAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVSG 282 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~~ 282 (316)
+++|+.++.+|.... ....+.++|.+|.+++..... ...+..||+.+++|+.+ ++ |... .....+..+
T Consensus 79 ~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r-------~~~~~~~~~ 149 (306)
T 3ii7_A 79 KDSWYSKLGPPTPRD-SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM-LTQR-------CSHGMVEAN 149 (306)
T ss_dssp TTEEEEEECCSSCCB-SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC-SSCC-------BSCEEEEET
T ss_pred CCeEEECCCCCcccc-ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC-cCCc-------ceeEEEEEC
Confidence 999999987765432 233567899999998764221 45799999999999998 44 4333 334567789
Q ss_pred CeEEEEEccCC--C----eEEEEEEeeCCCCCCeeeE
Q 047073 283 GFLYLCDGFLE--P----NLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 283 G~L~lv~~~~~--~----~~~vW~l~~~~~~~~W~~~ 313 (316)
|+|+++..... . .-++|+.+- . +..|++.
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~-~-~~~W~~~ 184 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDP-A-TETWTEL 184 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEET-T-TTEEEEE
T ss_pred CEEEEECCCCCCCCcccccceEEEeCC-C-CCeEEEC
Confidence 99999876422 1 456777753 2 3469875
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.79 E-value=7e-07 Score=77.83 Aligned_cols=169 Identities=9% Similarity=0.075 Sum_probs=109.1
Q ss_pred ccCceEEeeeec---cCCceEEEEcCCCCc---eEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCC
Q 047073 124 SCNGLICLHEFS---YKQDIISVCNPILGD---HLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKP 197 (316)
Q Consensus 124 s~~Gll~~~~~~---~~~~~~~v~NP~T~~---~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~ 197 (316)
..+|.|++.++. .....++++||.|++ |..+++++. .+...... .++ -+|+.+...... ....
T Consensus 60 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~-~r~~~~~~-~~~-----~~lyv~GG~~~~----~~~~ 128 (301)
T 2vpj_A 60 SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV-RRGLAGAT-TLG-----DMIYVSGGFDGS----RRHT 128 (301)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS-CCBSCEEE-EET-----TEEEEECCBCSS----CBCC
T ss_pred EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC-CccceeEE-EEC-----CEEEEEcccCCC----cccc
Confidence 346666555421 114579999999999 999998876 33332221 221 245555432221 3367
Q ss_pred eEEEEEeCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccce
Q 047073 198 QVEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSI 276 (316)
Q Consensus 198 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~ 276 (316)
.+++|+..+++|+.++.+|... .....+.++|.+|.+++..... ...+.+||+.+++|+.++-.|... ...
T Consensus 129 ~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-------~~~ 200 (301)
T 2vpj_A 129 SMERYDPNIDQWSMLGDMQTAR-EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR-------SGA 200 (301)
T ss_dssp EEEEEETTTTEEEEEEECSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC-------BSC
T ss_pred eEEEEcCCCCeEEECCCCCCCc-ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc-------ccc
Confidence 8999999999999987666443 2233677899999997653222 457999999999999984224333 344
Q ss_pred EEEEECCeEEEEEccCC--CeEEEEEEeeCCCCCCeeeE
Q 047073 277 SVGVSGGFLYLCDGFLE--PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 277 ~L~~~~G~L~lv~~~~~--~~~~vW~l~~~~~~~~W~~~ 313 (316)
.++..+|+|+++..... ..-++|+++- . +..|++.
T Consensus 201 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~-~-~~~W~~~ 237 (301)
T 2vpj_A 201 GVALLNDHIYVVGGFDGTAHLSSVEAYNI-R-TDSWTTV 237 (301)
T ss_dssp EEEEETTEEEEECCBCSSSBCCCEEEEET-T-TTEEEEE
T ss_pred eEEEECCEEEEEeCCCCCcccceEEEEeC-C-CCcEEEC
Confidence 66778999999886532 1345666643 2 3469875
No 14
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.78 E-value=4e-07 Score=79.85 Aligned_cols=155 Identities=12% Similarity=0.046 Sum_probs=103.3
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
...++++||.|++|..+|+++. .+...... .++ -+|+.+...... .....+++|+..+++|+.++.+|.
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~-~~~-----~~iyv~GG~~~~----~~~~~~~~yd~~~~~W~~~~~~p~ 157 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSV-PRNRIGVG-VID-----GHIYAVGGSHGC----IHHNSVERYEPERDEWHLVAPMLT 157 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSS-CCBTCEEE-EET-----TEEEEECCEETT----EECCCEEEEETTTTEEEECCCCSS
T ss_pred cceEEEECCCCCeEeECCCCCc-CccccEEE-EEC-----CEEEEEcCCCCC----cccccEEEECCCCCeEeECCCCCc
Confidence 3579999999999999998876 33332221 221 145555432222 235779999999999999987765
Q ss_pred eeccCCcceeeCCeEEEEEecCCCC-ccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEECCeEEEEEccCC--C
Q 047073 218 VLNQPYYGAFLNSALHWYAHSHDKR-TAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLE--P 294 (316)
Q Consensus 218 ~~~~~~~~v~~~G~lywl~~~~~~~-~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~--~ 294 (316)
... ....+.++|.+|.+++..... ...+..||+.+++|+.++-.|... .....+..+|+|+++....+ .
T Consensus 158 ~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~~~ 229 (308)
T 1zgk_A 158 RRI-GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR-------SGAGVCVLHNCIYAAGGYDGQDQ 229 (308)
T ss_dssp CCB-SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC-------BSCEEEEETTEEEEECCBCSSSB
T ss_pred ccc-ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc-------ccceEEEECCEEEEEeCCCCCCc
Confidence 432 233677899999997754322 357999999999999884224332 33456778999999886532 2
Q ss_pred eEEEEEEeeCCCCCCeeeE
Q 047073 295 NLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 295 ~~~vW~l~~~~~~~~W~~~ 313 (316)
.-++|+++- . +..|++.
T Consensus 230 ~~~v~~yd~-~-~~~W~~~ 246 (308)
T 1zgk_A 230 LNSVERYDV-E-TETWTFV 246 (308)
T ss_dssp CCCEEEEET-T-TTEEEEC
T ss_pred cceEEEEeC-C-CCcEEEC
Confidence 456777743 2 3469864
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.69 E-value=1.2e-06 Score=78.42 Aligned_cols=172 Identities=12% Similarity=0.033 Sum_probs=106.5
Q ss_pred ccCceEEeeeeccCCceEEEEcCC--CCceEecCCCC-CCCccCceEEEEEeCCCCCeEEEEEEEe-e--cccccCCCCC
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPI--LGDHLVLPQLK-RKNVATRIRGFGYNHCTNQYKVIQILSY-K--DQAAISSSKP 197 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~--T~~~~~lP~~~-~~~~~~~~~~~~~d~~~~~~kvv~~~~~-~--~~~~~~~~~~ 197 (316)
..+|.|.+..+ ....+++++||. +++|..+|++| . .+..... ..++ . +|+.+... . .+.. ....
T Consensus 17 ~~~~~iyv~GG-~~~~~~~~~d~~~~~~~W~~~~~~p~~-~R~~~~~-~~~~----~-~lyv~GG~~~~~~~~~--~~~~ 86 (357)
T 2uvk_A 17 IDNDTVYIGLG-SAGTAWYKLDTQAKDKKWTALAAFPGG-PRDQATS-AFID----G-NLYVFGGIGKNSEGLT--QVFN 86 (357)
T ss_dssp EETTEEEEECG-GGTTCEEEEETTSSSCCEEECCCCTTC-CCBSCEE-EEET----T-EEEEECCEEECTTSCE--EECC
T ss_pred EECCEEEEEeC-cCCCeEEEEccccCCCCeeECCCCCCC-cCccceE-EEEC----C-EEEEEcCCCCCCCccc--eeec
Confidence 33777766653 225689999998 49999999987 4 3332222 2221 1 45555433 1 1111 3467
Q ss_pred eEEEEEeCCCceEecCCCC-ceeccCCcceeeCCeEEEEEecCCC-----------------------------------
Q 047073 198 QVEVHTIGTNTWRNIGDLP-YVLNQPYYGAFLNSALHWYAHSHDK----------------------------------- 241 (316)
Q Consensus 198 ~~~vy~s~t~~W~~~~~~~-~~~~~~~~~v~~~G~lywl~~~~~~----------------------------------- 241 (316)
.+++|+..+++|+.+..++ ... .....+.++|.+|.+++....
T Consensus 87 ~v~~yd~~~~~W~~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 2uvk_A 87 DVHKYNPKTNSWVKLMSHAPMGM-AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYF 165 (357)
T ss_dssp CEEEEETTTTEEEECSCCCSSCC-SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGC
T ss_pred cEEEEeCCCCcEEECCCCCCccc-ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccC
Confidence 8999999999999998766 221 222256699999999875311
Q ss_pred CccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEECCeEEEEEccCC---CeEEEEEEeeCCCCCCeeeE
Q 047073 242 RTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVSGGFLYLCDGFLE---PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 242 ~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~---~~~~vW~l~~~~~~~~W~~~ 313 (316)
....+.+||+.+++|+.+ ++ |.... ....++..+|+|+++....+ ..-++|.++-+-.+..|+++
T Consensus 166 ~~~~v~~yd~~~~~W~~~~~~-p~~~~------~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 166 FNKFLLSFDPSTQQWSYAGES-PWYGT------AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp CCCEEEEEETTTTEEEEEEEC-SSCCC------BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred CcccEEEEeCCCCcEEECCCC-CCCCc------ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 014799999999999998 55 32221 22466788999999865321 23456666421123468864
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.66 E-value=6.6e-06 Score=75.47 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=44.7
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccccccccchhhhhhcCCHHHHHHHHhc
Q 047073 36 NVSMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLAR 85 (316)
Q Consensus 36 ~~~~~~LP~dll~~IL~rLP~~sl~r~r~VcK~W~sli~s~~F~~~~~~~ 85 (316)
...+..||+|++..||..|++++|.++..|||+|+.++.++.+-+..+..
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 45577899999999999999999999999999999999999888776643
No 17
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.46 E-value=3.2e-06 Score=77.45 Aligned_cols=46 Identities=28% Similarity=0.444 Sum_probs=39.8
Q ss_pred CCCCCCHH----HHHHHHhcCCccccccccccchhhhhhcCCHHHHHHHH
Q 047073 38 SMEDLPLP----ILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHL 83 (316)
Q Consensus 38 ~~~~LP~d----ll~~IL~rLP~~sl~r~r~VcK~W~sli~s~~F~~~~~ 83 (316)
.+..||+| |+..||+.|++++|.++.+|||+|+.++.++.+-+..+
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~ 59 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLI 59 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHH
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 34569999 99999999999999999999999999998876655444
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.44 E-value=8.1e-05 Score=68.32 Aligned_cols=45 Identities=20% Similarity=0.399 Sum_probs=39.3
Q ss_pred CCCCCCHHHHHHHHhcCCccccccccccchhhhhhcCC-HHHHHHH
Q 047073 38 SMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSD-PYFAKIH 82 (316)
Q Consensus 38 ~~~~LP~dll~~IL~rLP~~sl~r~r~VcK~W~sli~s-~~F~~~~ 82 (316)
.+..||+|++.+||+.||+++|.++..|||+|+.++.+ +..-+.+
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~ 59 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKL 59 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 35579999999999999999999999999999999998 6654443
No 19
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.36 E-value=1e-05 Score=72.12 Aligned_cols=156 Identities=8% Similarity=-0.066 Sum_probs=94.1
Q ss_pred ceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe--CCCceEecCCCC
Q 047073 139 DIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI--GTNTWRNIGDLP 216 (316)
Q Consensus 139 ~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s--~t~~W~~~~~~~ 216 (316)
..+.++||.|++|..++++|....... ....++ =+|+.+......+ .....+++|+. .++.|+.+..++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~-~~~~~~-----~~iyv~GG~~~~~---~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGA-AVVNKG-----DKTWLINGEAKPG---LRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSC-EEEEET-----TEEEEECCEEETT---EECCCEEEEECC---CEEEECCCSS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccc-cEEEEC-----CEEEEEeeecCCC---cccCceEEEEecCCCCcEEecCCCC
Confidence 689999999999999987765122212 112221 1344443222111 22566788876 899999998765
Q ss_pred ceecc-CCcceeeCCeEEEEEecCCCC------------------ccEEEEEeCCCceeeEe-cCCCCccccCCCCccce
Q 047073 217 YVLNQ-PYYGAFLNSALHWYAHSHDKR------------------TAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSI 276 (316)
Q Consensus 217 ~~~~~-~~~~v~~~G~lywl~~~~~~~------------------~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~ 276 (316)
.+... ....+.++|.||.+++..... ...+.+||+++++|+.+ ++ |... ...
T Consensus 239 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r-------~~~ 310 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-SQGR-------AYG 310 (357)
T ss_dssp TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC-SSCC-------BSS
T ss_pred CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC-CCCc-------ccc
Confidence 43222 223678899999998742110 13588999999999998 55 4433 223
Q ss_pred EEEEECCeEEEEEccCC---CeEEEEEEeeCCCCCCeeeE
Q 047073 277 SVGVSGGFLYLCDGFLE---PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 277 ~L~~~~G~L~lv~~~~~---~~~~vW~l~~~~~~~~W~~~ 313 (316)
..+..+|+|+++..... ..=+||+++= + +++|...
T Consensus 311 ~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~-~-~~~~~~~ 348 (357)
T 2uvk_A 311 VSLPWNNSLLIIGGETAGGKAVTDSVLITV-K-DNKVTVQ 348 (357)
T ss_dssp EEEEETTEEEEEEEECGGGCEEEEEEEEEC---CCSCEEE
T ss_pred eeEEeCCEEEEEeeeCCCCCEeeeEEEEEE-c-CcEeEee
Confidence 55778999999987532 2457898853 2 3468764
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.25 E-value=2.4e-05 Score=76.52 Aligned_cols=160 Identities=11% Similarity=0.004 Sum_probs=96.9
Q ss_pred cCceEEeeeec--cCCceEEEEcCCCCceEecC-CC-----CCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCC
Q 047073 125 CNGLICLHEFS--YKQDIISVCNPILGDHLVLP-QL-----KRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSK 196 (316)
Q Consensus 125 ~~Gll~~~~~~--~~~~~~~v~NP~T~~~~~lP-~~-----~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~ 196 (316)
.+|.|++.++. .....++++||.|++|..++ +. +. .+.. .+...... + -+|+.++...... ...
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~--hs~~~~~~-~-~~lyv~GG~~~~~---~~~ 467 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPV-ARMC--HTFTTISR-N-NQLLLIGGRKAPH---QGL 467 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCC-CCBS--CEEEEETT-T-TEEEEECCBSSTT---CBC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCc-cccc--eEEEEEcc-C-CEEEEEcCCCCCC---Ccc
Confidence 46666666532 12457999999999999998 52 22 2222 12222110 1 2355554322211 235
Q ss_pred CeEEEEEeCCCceEecCCCCceeccCCcceee-CCeEEEEEecCCCCccEEEEEeCCCceeeEecCC---CCccccCCCC
Q 047073 197 PQVEVHTIGTNTWRNIGDLPYVLNQPYYGAFL-NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGP---PTREYEKCRP 272 (316)
Q Consensus 197 ~~~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lP---P~~~~~~~~~ 272 (316)
..+++|+..+++|+.++.+|..... ...+.+ +|.+|.+++.... . .+.+||+.+++|+.++.. |...
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~-~-~v~~yd~~t~~W~~~~~~g~~p~~r------ 538 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEG-P-AMLLYNVTEEIFKDVTPKDEFFQNS------ 538 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSS-C-SEEEEETTTTEEEECCCSSGGGGSC------
T ss_pred ccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCC-C-CEEEEECCCCceEEccCCCCCCCcc------
Confidence 6799999999999999887754332 234554 9999999876433 2 799999999999988531 2222
Q ss_pred ccceEEEEEC---CeEEEEEccCC----CeEEEEEEe
Q 047073 273 INSISVGVSG---GFLYLCDGFLE----PNLDIWIMK 302 (316)
Q Consensus 273 ~~~~~L~~~~---G~L~lv~~~~~----~~~~vW~l~ 302 (316)
.....++++ |+|+++..... ..-++|+.+
T Consensus 539 -~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd 574 (695)
T 2zwa_A 539 -LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK 574 (695)
T ss_dssp -CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE
T ss_pred -cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE
Confidence 222323444 88999886521 234566664
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.89 E-value=2.4e-06 Score=73.28 Aligned_cols=51 Identities=20% Similarity=0.357 Sum_probs=45.9
Q ss_pred CCCCCCHHHHHHHHhcCCccccccccccchhhhhhcCCHHHHHHHHhcCCC
Q 047073 38 SMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPF 88 (316)
Q Consensus 38 ~~~~LP~dll~~IL~rLP~~sl~r~r~VcK~W~sli~s~~F~~~~~~~~~~ 88 (316)
.+..||+||+..||+.|++++|+++.+|||+||.+..++..-+.++.+..+
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 356799999999999999999999999999999999999998877776543
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.76 E-value=0.00045 Score=67.49 Aligned_cols=132 Identities=10% Similarity=0.006 Sum_probs=83.6
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCC---CCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQ---LKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~---~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
++|.|++.++......++++||.|++|..+++ +|. .+.. ..++.++... -+|+.++....++. .....+++
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~-~r~~-~~a~v~~~~~--~~iyv~GG~~~~~~--~~~~~v~~ 572 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQ-NSLV-SAGLEFDPVS--KQGIILGGGFMDQT--TVSDKAII 572 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGG-SCCB-SCEEEEETTT--TEEEEECCBCTTSS--CBCCEEEE
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCC-cccc-eeEEEEeCCC--CEEEEECCcCCCCC--eeeCcEEE
Confidence 37777666532112289999999999999987 333 2222 2223444322 34555543322211 34678999
Q ss_pred EEeCCCc------eEecCCCCceeccCCcceeeC-CeEEEEEecCCC----CccEEEEEeCCCceeeEecCC
Q 047073 202 HTIGTNT------WRNIGDLPYVLNQPYYGAFLN-SALHWYAHSHDK----RTAFMCSFDLGDEQFRQFPGP 262 (316)
Q Consensus 202 y~s~t~~------W~~~~~~~~~~~~~~~~v~~~-G~lywl~~~~~~----~~~~i~~fD~~~~~~~~i~lP 262 (316)
|+..++. |+.+..+|.........+.++ |.+|.+++.... ....+..||+.+++|..+++|
T Consensus 573 yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 573 FKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp EEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred EEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 9999999 777765432222233457778 999999875322 145799999999999988874
No 23
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.56 E-value=2e-05 Score=69.61 Aligned_cols=42 Identities=38% Similarity=0.677 Sum_probs=37.7
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccccccccchhhhhhcCCHH
Q 047073 36 NVSMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPY 77 (316)
Q Consensus 36 ~~~~~~LP~dll~~IL~rLP~~sl~r~r~VcK~W~sli~s~~ 77 (316)
...+..||+|++.+||.+|+.+++.+++.|||+|+.++.++.
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 456789999999999999999999999999999999986554
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.51 E-value=0.00029 Score=68.33 Aligned_cols=152 Identities=11% Similarity=0.010 Sum_probs=91.8
Q ss_pred eEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeeccc--ccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 140 IISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQA--AISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 140 ~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~--~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+..+||.+++|..++++|. .. . ...+.+. +-+|+.+.....+. ........+++|+..++.|+.+..++.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~-~~--~--~~av~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~ 239 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI-VP--A--AAAIEPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT 239 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS-CC--S--EEEEETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC
T ss_pred ccccCCCCCCeeeeeccCCC-Cc--e--eEEEEec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC
Confidence 45567999999998887764 11 1 2222221 23555554432210 000112368999999999998865544
Q ss_pred eeccCCc--ceeeCCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEE-CCeEEEEEccCC
Q 047073 218 VLNQPYY--GAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVS-GGFLYLCDGFLE 293 (316)
Q Consensus 218 ~~~~~~~--~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~ 293 (316)
.....+. .+..||.+|.+++.. ...+..||+.+++|..+ ++ |... .....+.+ +|+|+++....+
T Consensus 240 ~~~~~~~~~~~~~~g~lyv~GG~~---~~~v~~yd~~t~~W~~~~~~-~~~R-------~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 240 KHDMFCPGISMDGNGQIVVTGGND---AKKTSLYDSSSDSWIPGPDM-QVAR-------GYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp SCCCSSCEEEECTTSCEEEECSSS---TTCEEEEEGGGTEEEECCCC-SSCC-------SSCEEEECTTSCEEEECCCCC
T ss_pred CCCCccccccCCCCCCEEEeCCCC---CCceEEecCcCCceeECCCC-Cccc-------cccceEEecCCeEEEEeCccc
Confidence 3322332 234689999998754 23799999999999987 33 3322 34466777 999999987322
Q ss_pred -----CeEEEEEEeeCCCCCCeeeE
Q 047073 294 -----PNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 294 -----~~~~vW~l~~~~~~~~W~~~ 313 (316)
..+.+|-.+ +..|+..
T Consensus 309 ~~~~~~~~e~yd~~----t~~W~~~ 329 (656)
T 1k3i_A 309 GGVFEKNGEVYSPS----SKTWTSL 329 (656)
T ss_dssp SSSCCCCEEEEETT----TTEEEEE
T ss_pred CCcccccceEeCCC----CCcceeC
Confidence 344444332 3468764
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.37 E-value=0.00059 Score=66.08 Aligned_cols=121 Identities=7% Similarity=0.012 Sum_probs=78.0
Q ss_pred CceEEeeeecc---------CCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCC
Q 047073 126 NGLICLHEFSY---------KQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSK 196 (316)
Q Consensus 126 ~Gll~~~~~~~---------~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~ 196 (316)
+|.|++..+.. ....+.++||.|++|..++.++. .+.....+..+.. +-+|+.+... ..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~~---~g~lyv~GG~--------~~ 264 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMDG---NGQIVVTGGN--------DA 264 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEECT---TSCEEEECSS--------ST
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCCC---CCCEEEeCCC--------CC
Confidence 77777664311 11368999999999999887754 2222121222211 1244544321 12
Q ss_pred CeEEEEEeCCCceEecCCCCceeccCCcceee-CCeEEEEEecCCCC--ccEEEEEeCCCceeeEe
Q 047073 197 PQVEVHTIGTNTWRNIGDLPYVLNQPYYGAFL-NSALHWYAHSHDKR--TAFMCSFDLGDEQFRQF 259 (316)
Q Consensus 197 ~~~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~--~~~i~~fD~~~~~~~~i 259 (316)
..+++|+..++.|+.++.++... .....+.+ ||.+|.+++...+. ...+..||+.+++|..+
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CceEEecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 37999999999999998776543 22334666 99999998732211 35689999999999987
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.08 E-value=0.00012 Score=69.65 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=29.4
Q ss_pred CCCCCCCHHHHHHHHhcCC-ccccccccccchhhhhh
Q 047073 37 VSMEDLPLPILVDVFSRLP-IKTILQIKCVCKTWHSL 72 (316)
Q Consensus 37 ~~~~~LP~dll~~IL~rLP-~~sl~r~r~VcK~W~sl 72 (316)
..++.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4577899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.31 E-value=0.00097 Score=63.40 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=31.3
Q ss_pred CCCCHHHHHHHHhcC-Cccccccccccchhhhhh
Q 047073 40 EDLPLPILVDVFSRL-PIKTILQIKCVCKTWHSL 72 (316)
Q Consensus 40 ~~LP~dll~~IL~rL-P~~sl~r~r~VcK~W~sl 72 (316)
..||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999987
No 28
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=89.03 E-value=8.6 Score=31.69 Aligned_cols=150 Identities=13% Similarity=0.050 Sum_probs=81.2
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
-..+|-+.+.+.. ...++++|+..+....+.... ......++.+|+.. +++... .....+.+|
T Consensus 128 ~~~~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~---~~~~p~~i~~~~~g---~l~v~~---------~~~~~i~~~ 190 (286)
T 1q7f_A 128 VDNKGRIIVVECK--VMRVIIFDQNGNVLHKFGCSK---HLEFPNGVVVNDKQ---EIFISD---------NRAHCVKVF 190 (286)
T ss_dssp ECTTSCEEEEETT--TTEEEEECTTSCEEEEEECTT---TCSSEEEEEECSSS---EEEEEE---------GGGTEEEEE
T ss_pred EeCCCCEEEEECC--CCEEEEEcCCCCEEEEeCCCC---ccCCcEEEEECCCC---CEEEEE---------CCCCEEEEE
Confidence 3446777666523 578999998765555543221 11225677777742 233322 124568888
Q ss_pred EeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEE
Q 047073 203 TIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGV 280 (316)
Q Consensus 203 ~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~ 280 (316)
+.....-..+..... .....++.+ +|.+|...... ...|..||.+.+....+.. ..... ....++.
T Consensus 191 ~~~g~~~~~~~~~g~--~~~p~~i~~d~~G~l~v~~~~~---~~~i~~~~~~g~~~~~~~~-~~~~~------~~~~i~~ 258 (286)
T 1q7f_A 191 NYEGQYLRQIGGEGI--TNYPIGVGINSNGEILIADNHN---NFNLTIFTQDGQLISALES-KVKHA------QCFDVAL 258 (286)
T ss_dssp ETTCCEEEEESCTTT--SCSEEEEEECTTCCEEEEECSS---SCEEEEECTTSCEEEEEEE-SSCCS------CEEEEEE
T ss_pred cCCCCEEEEEccCCc--cCCCcEEEECCCCCEEEEeCCC---CEEEEEECCCCCEEEEEcc-cCCCC------cceeEEE
Confidence 875443333321100 011113444 67766655442 1289999988776666644 21110 1223444
Q ss_pred E-CCeEEEEEccCCCeEEEEEEee
Q 047073 281 S-GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 281 ~-~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
. +|+|++.. .+..+.||....
T Consensus 259 ~~~g~l~vs~--~~~~v~v~~~~~ 280 (286)
T 1q7f_A 259 MDDGSVVLAS--KDYRLYIYRYVQ 280 (286)
T ss_dssp ETTTEEEEEE--TTTEEEEEECSC
T ss_pred CCCCcEEEEC--CCCeEEEEEccc
Confidence 3 78887774 378999998754
No 29
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=85.07 E-value=16 Score=30.63 Aligned_cols=110 Identities=15% Similarity=0.044 Sum_probs=66.3
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceE-ecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHL-VLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~-~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
+|.|..+.+.+..+.+.++|+.|++.. .++..+. .++.|.....+ ++.... -....+.||+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------~FgeGit~~g~--~ly~lt---------w~~~~v~v~D~ 114 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR------YFGEGISDWKD--KIVGLT---------WKNGLGFVWNI 114 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT------CCEEEEEEETT--EEEEEE---------SSSSEEEEEET
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc------cceeEEEEeCC--EEEEEE---------eeCCEEEEEEC
Confidence 788887775434569999999999854 3433222 22333333222 333332 22567899998
Q ss_pred CCCceE-ecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCc-eeeEecC
Q 047073 205 GTNTWR-NIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE-QFRQFPG 261 (316)
Q Consensus 205 ~t~~W~-~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~-~~~~i~l 261 (316)
.+..=. .++.. ....++..+|...|++.. ...|..+|+++. .-..|+.
T Consensus 115 ~t~~~~~ti~~~-----~eG~glt~dg~~L~~SdG----s~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 115 RNLRQVRSFNYD-----GEGWGLTHNDQYLIMSDG----TPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TTCCEEEEEECS-----SCCCCEEECSSCEEECCS----SSEEEEECTTTCSEEEEEEC
T ss_pred ccCcEEEEEECC-----CCceEEecCCCEEEEECC----CCeEEEEcCCCCeEEEEEEe
Confidence 887542 22211 123367778877777654 458999999975 4566666
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=84.19 E-value=18 Score=30.39 Aligned_cols=113 Identities=12% Similarity=0.007 Sum_probs=64.7
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
-+|.|....+....+.+.++|+.|++... +|.... .+ ..++..+. + ++.... -....+.||+
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~f---geGi~~~g--~--~lyv~t---------~~~~~v~viD 92 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YF---GEGLTLLN--E--KLYQVV---------WLKNIGFIYD 92 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CC---EEEEEEET--T--EEEEEE---------TTCSEEEEEE
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cc---eEEEEEeC--C--EEEEEE---------ecCCEEEEEE
Confidence 34777777632336899999999999553 443221 11 23444442 2 333332 2356789999
Q ss_pred eCCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCc-eeeEecC
Q 047073 204 IGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE-QFRQFPG 261 (316)
Q Consensus 204 s~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~-~~~~i~l 261 (316)
..+.. .+...+.. .....++..+|.-.|++. + ...|..+|+++. .-..|+.
T Consensus 93 ~~t~~--v~~~i~~g-~~~g~glt~Dg~~l~vs~-g---s~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 93 RRTLS--NIKNFTHQ-MKDGWGLATDGKILYGSD-G---TSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp TTTTE--EEEEEECC-SSSCCEEEECSSSEEEEC-S---SSEEEEECTTTCCEEEEEEC
T ss_pred CCCCc--EEEEEECC-CCCeEEEEECCCEEEEEC-C---CCeEEEEECCCCcEEEEEEE
Confidence 88763 22222222 122335777776555665 3 458999999885 3455555
No 31
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=83.29 E-value=22 Score=30.93 Aligned_cols=135 Identities=10% Similarity=0.086 Sum_probs=71.4
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceE-ecCCCC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWR-NIGDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~-~~~~~~ 216 (316)
.+.++|||..+++...+-... ....+..+.+.+. +.+ ++... ....+.+|+..++.-. .+....
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~-~~~--l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~ 176 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETD---ESTYVASVKWSHD-GSF--LSVGL---------GNGLVDIYDVESQTKLRTMAGHQ 176 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECC---TTCCEEEEEECTT-SSE--EEEEE---------TTSCEEEEETTTCCEEEEECCCS
T ss_pred CCeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCC-CCE--EEEEC---------CCCeEEEEECcCCeEEEEecCCC
Confidence 789999999999876544331 2233667777763 333 22221 1356888988877432 221111
Q ss_pred ceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCeEEEEEccCCCe
Q 047073 217 YVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGFLYLCDGFLEPN 295 (316)
Q Consensus 217 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~ 295 (316)
..-..+..+|.+...+.. ...|..+|+.+..-....+ ..... .-..+... +|++.++... +..
T Consensus 177 ----~~v~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~-~~~~~------~v~~~~~~~~~~~l~s~~~-d~~ 240 (401)
T 4aez_A 177 ----ARVGCLSWNRHVLSSGSR----SGAIHHHDVRIANHQIGTL-QGHSS------EVCGLAWRSDGLQLASGGN-DNV 240 (401)
T ss_dssp ----SCEEEEEEETTEEEEEET----TSEEEEEETTSSSCEEEEE-ECCSS------CEEEEEECTTSSEEEEEET-TSC
T ss_pred ----CceEEEEECCCEEEEEcC----CCCEEEEecccCcceeeEE-cCCCC------CeeEEEEcCCCCEEEEEeC-CCe
Confidence 111134456665555544 4589999997433222222 11110 11122222 5555555553 678
Q ss_pred EEEEEEee
Q 047073 296 LDIWIMKK 303 (316)
Q Consensus 296 ~~vW~l~~ 303 (316)
+.+|-+..
T Consensus 241 v~iwd~~~ 248 (401)
T 4aez_A 241 VQIWDARS 248 (401)
T ss_dssp EEEEETTC
T ss_pred EEEccCCC
Confidence 88887653
No 32
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=82.45 E-value=19 Score=29.44 Aligned_cols=115 Identities=10% Similarity=-0.029 Sum_probs=62.0
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
+....+|.+.+.... ...++++|| +++...+..+.. .....++.+|+.. ++.... .....+.
T Consensus 104 i~~~~~g~l~v~~~~--~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~~g---~l~v~~---------~~~~~i~ 165 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMN--GNRIGRITD-DGKIREYELPNK---GSYPSFITLGSDN---ALWFTE---------NQNNAIG 165 (299)
T ss_dssp EEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTS---CEEEEE---------TTTTEEE
T ss_pred eEECCCCCEEEEecC--CceEEEECC-CCCEEEecCCCC---CCCCceEEEcCCC---CEEEEe---------CCCCEEE
Confidence 333446777666522 568999999 777665433211 1224567776542 222221 1235677
Q ss_pred EEEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
+|+. ++.......... .....++.+ +|.+|+.... ...|..||+ +..+..+.+
T Consensus 166 ~~~~-~g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~----~~~i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTP--ASGPVGITKGNDDALWFVEII----GNKIGRITT-SGEITEFKI 220 (299)
T ss_dssp EECT-TCCEEEEECSST--TCCEEEEEECTTSSEEEEETT----TTEEEEECT-TCCEEEEEC
T ss_pred EEcC-CCcEEEeeCCCC--CCcceeEEECCCCCEEEEccC----CceEEEECC-CCcEEEEEC
Confidence 7777 666654311100 001113333 5787655433 348999999 777776666
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.78 E-value=19 Score=31.87 Aligned_cols=149 Identities=9% Similarity=0.077 Sum_probs=73.1
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
.++-++..... .+.+.|||..+++...+-... .+...+..+.|.|..+.+ ++.. .....+.+++.
T Consensus 130 ~~~~~lasGs~--dg~i~lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~~~-l~s~----------s~D~~v~iwd~ 194 (435)
T 4e54_B 130 THPSTVAVGSK--GGDIMLWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNTNQ-FYAS----------SMEGTTRLQDF 194 (435)
T ss_dssp SCTTCEEEEET--TSCEEEECSSCCSCCEEECCC--SSSCCCCEEEECSSCTTE-EEEE----------CSSSCEEEEET
T ss_pred CCCCEEEEEeC--CCEEEEEECCCCCceeEEEcc--CCCCCEEEEEEeCCCCCE-EEEE----------eCCCEEEEeec
Confidence 35544433324 789999999888744322221 122336677777754443 2221 22356788887
Q ss_pred CCCceEecCCCCceeccCCcce--eeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-
Q 047073 205 GTNTWRNIGDLPYVLNQPYYGA--FLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS- 281 (316)
Q Consensus 205 ~t~~W~~~~~~~~~~~~~~~~v--~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~- 281 (316)
+++.-+........ .....++ .-+|.+...+.. ...|..+|+.+.....+.. +.. .-..+...
T Consensus 195 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~----dg~i~~wd~~~~~~~~~~~---h~~------~v~~v~~~p 260 (435)
T 4e54_B 195 KGNILRVFASSDTI-NIWFCSLDVSASSRMVVTGDN----VGNVILLNMDGKELWNLRM---HKK------KVTHVALNP 260 (435)
T ss_dssp TSCEEEEEECCSSC-SCCCCCEEEETTTTEEEEECS----SSBEEEEESSSCBCCCSBC---CSS------CEEEEEECT
T ss_pred cCCceeEEeccCCC-CccEEEEEECCCCCEEEEEeC----CCcEeeeccCcceeEEEec---ccc------eEEeeeecC
Confidence 77654433211000 0001112 225555544443 4578889987654332221 110 11222222
Q ss_pred CCe-EEEEEccCCCeEEEEEEee
Q 047073 282 GGF-LYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 282 ~G~-L~lv~~~~~~~~~vW~l~~ 303 (316)
+|. +++... .+..+.||-+..
T Consensus 261 ~~~~~~~s~s-~d~~v~iwd~~~ 282 (435)
T 4e54_B 261 CCDWFLATAS-VDQTVKIWDLRQ 282 (435)
T ss_dssp TCSSEEEEEE-TTSBCCEEETTT
T ss_pred CCceEEEEec-CcceeeEEeccc
Confidence 344 444444 378889997653
No 34
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.41 E-value=43 Score=32.87 Aligned_cols=136 Identities=12% Similarity=0.044 Sum_probs=69.9
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
+|.|.+.+.. ..++.++++-.+....|-.. ......++.+|+..+. |++... .....+++++..
T Consensus 482 ~~~LY~tD~~--~~~I~v~~ldG~~~~~l~~~----~l~~P~gIaVDp~~g~--LYwtD~--------g~~~~I~~~~~d 545 (791)
T 3m0c_C 482 HSNIYWTDSV--LGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGF--MYWTDW--------GTPAKIKKGGLN 545 (791)
T ss_dssp TTEEEEEETT--TTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTE--EEEEEC--------SSSCEEEEEETT
T ss_pred CCcEEEEecC--CCeEEEEeCCCCeEEEEEeC----CCCCcceEEEecCCCC--EEEecC--------CCCCeEEEEecC
Confidence 4445555422 45666666665554443221 1112568888886542 222221 112456666655
Q ss_pred CCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEE
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVS 281 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~ 281 (316)
...-+.+.... ...-.++.+ +|.|||.... ...|.++|+....-..+ .. .... . ....|+..
T Consensus 546 G~~~~~lv~~~---l~~P~GLavD~~~~~LYwaD~~----~~~I~~~d~dG~~~~~v~~~-~~~l--~----~P~glav~ 611 (791)
T 3m0c_C 546 GVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTILED-EKRL--A----HPFSLAVF 611 (791)
T ss_dssp SCCEEEEECSS---CSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEEEC-TTTT--S----SEEEEEEE
T ss_pred CCceEEEEeCC---CCCceEEEEecCCCeEEEEeCC----CCcEEEEecCCCceEEEecC-CCcc--C----CCCEEEEe
Confidence 43322221100 011124444 5899999765 46899999987644443 22 1111 1 34466777
Q ss_pred CCeEEEEEcc
Q 047073 282 GGFLYLCDGF 291 (316)
Q Consensus 282 ~G~L~lv~~~ 291 (316)
+++|+++...
T Consensus 612 ~~~lYwtD~~ 621 (791)
T 3m0c_C 612 EDKVFWTDII 621 (791)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEEECC
Confidence 8888887754
No 35
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=80.49 E-value=29 Score=30.41 Aligned_cols=146 Identities=12% Similarity=0.125 Sum_probs=76.1
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
|.+++|.+.. ...++|||..|++...+-.... ....+..+.+.+. +.|-+ .+ .....+.+|+
T Consensus 114 S~~n~lAvgl----d~tV~lWd~~tg~~~~~~~~~~--~~~~V~sv~fspd-g~~la--sg---------s~Dg~v~iWd 175 (420)
T 4gga_A 114 SSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQ--PGEYISSVAWIKE-GNYLA--VG---------TSSAEVQLWD 175 (420)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECCS--TTCCEEEEEECTT-SSEEE--EE---------ETTSCEEEEE
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEecC--CCCcEEEEEECCC-CCEEE--EE---------ECCCeEEEEE
Confidence 3466665554 7899999999998776443321 2233667777664 33432 22 1246688999
Q ss_pred eCCCceE-ecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEE-E
Q 047073 204 IGTNTWR-NIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGV-S 281 (316)
Q Consensus 204 s~t~~W~-~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~-~ 281 (316)
..++.-. ...... ....++..+|.+...+.. ...+..+|..+.......+ ..+.. ....+.. -
T Consensus 176 ~~~~~~~~~~~~h~----~~v~~~s~~~~~l~sgs~----d~~i~~~d~~~~~~~~~~~-~~h~~------~~~~~~~~~ 240 (420)
T 4gga_A 176 VQQQKRLRNMTSHS----ARVGSLSWNSYILSSGSR----SGHIHHHDVRVAEHHVATL-SGHSQ------EVCGLRWAP 240 (420)
T ss_dssp TTTTEEEEEECCCS----SCEEEEEEETTEEEEEET----TSEEEEEETTSSSCEEEEE-ECCSS------CEEEEEECT
T ss_pred cCCCcEEEEEeCCC----CceEEEeeCCCEEEEEeC----CCceeEeeecccceeeEEe-ccccc------ceeeeeecC
Confidence 8877421 111111 111134556655444444 4577788877654433333 11111 1111222 2
Q ss_pred CCeEEEEEccCCCeEEEEEEee
Q 047073 282 GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 282 ~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
+|+..+.... +..+.||-...
T Consensus 241 ~g~~l~s~~~-D~~v~i~~~~~ 261 (420)
T 4gga_A 241 DGRHLASGGN-DNLVNVWPSAP 261 (420)
T ss_dssp TSSEEEEEET-TSCEEEEESSC
T ss_pred CCCeeeeeec-cccceEEeecc
Confidence 4555444443 67778887643
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=75.96 E-value=32 Score=28.37 Aligned_cols=110 Identities=14% Similarity=0.024 Sum_probs=64.9
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
+|.|..+.+.+..+.+.++|+.|++... ++.+.. .++.|.....+. +.... -....+.||+.
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~------~fgeGi~~~~~~--ly~lt---------w~~~~v~v~D~ 92 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP------YFGAGIVAWRDR--LIQLT---------WRNHEGFVYDL 92 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT------CCEEEEEEETTE--EEEEE---------SSSSEEEEEET
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC------cceeEEEEeCCE--EEEEE---------eeCCEEEEEEC
Confidence 4778777644446799999999998654 333222 223333333232 22222 22577899998
Q ss_pred CCCceE-ecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCce-eeEecC
Q 047073 205 GTNTWR-NIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQ-FRQFPG 261 (316)
Q Consensus 205 ~t~~W~-~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~-~~~i~l 261 (316)
.+..=. .++. . ....++..+|...|++.. ...|..+|+++.+ -..|+.
T Consensus 93 ~tl~~~~ti~~---~--~~Gwglt~dg~~L~vSdg----s~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 93 ATLTPRARFRY---P--GEGWALTSDDSHLYMSDG----TAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTTEEEEEEEC---S--SCCCEEEECSSCEEEECS----SSEEEEECTTTCCEEEEEEC
T ss_pred CcCcEEEEEeC---C--CCceEEeeCCCEEEEECC----CCeEEEEeCCCCeEEEEEEE
Confidence 887432 2221 1 123367777877777754 4589999999853 355554
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.64 E-value=33 Score=27.88 Aligned_cols=137 Identities=8% Similarity=0.036 Sum_probs=73.3
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
+....+|.+.+.... ...++++|+ +++...++.+.. .....++.+|+. +. +.... .....+.
T Consensus 146 i~~~~~g~l~v~~~~--~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~-g~--l~v~~---------~~~~~i~ 207 (299)
T 2z2n_A 146 ITLGSDNALWFTENQ--NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGND-DA--LWFVE---------IIGNKIG 207 (299)
T ss_dssp EEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTT-SS--EEEEE---------TTTTEEE
T ss_pred EEEcCCCCEEEEeCC--CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCC-CC--EEEEc---------cCCceEE
Confidence 333446766665522 578999999 888766432211 122557777765 22 22221 2235677
Q ss_pred EEEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEE
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISV 278 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L 278 (316)
+|+. ++.......... .....++.+ +|.+|..... ...|..||+ +..+..+.+ +.... ....+
T Consensus 208 ~~~~-~g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~----~~~i~~~d~-~g~~~~~~~-~~~~~------~~~~i 272 (299)
T 2z2n_A 208 RITT-SGEITEFKIPTP--NARPHAITAGAGIDLWFTEWG----ANKIGRLTS-NNIIEEYPI-QIKSA------EPHGI 272 (299)
T ss_dssp EECT-TCCEEEEECSST--TCCEEEEEECSTTCEEEEETT----TTEEEEEET-TTEEEEEEC-SSSSC------CEEEE
T ss_pred EECC-CCcEEEEECCCC--CCCceeEEECCCCCEEEeccC----CceEEEECC-CCceEEEeC-CCCCC------ccceE
Confidence 7777 666654321100 011113444 5776554433 358999999 456777766 32221 22233
Q ss_pred EEECCeEEEEEc
Q 047073 279 GVSGGFLYLCDG 290 (316)
Q Consensus 279 ~~~~G~L~lv~~ 290 (316)
+..+|.|.+...
T Consensus 273 ~~~~g~l~v~~~ 284 (299)
T 2z2n_A 273 CFDGETIWFAME 284 (299)
T ss_dssp EECSSCEEEEET
T ss_pred EecCCCEEEEec
Confidence 336678887765
No 38
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=72.16 E-value=52 Score=29.04 Aligned_cols=113 Identities=11% Similarity=0.032 Sum_probs=55.9
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
++.+|.|...+ ......+++.++-......+-.. ......++.+|+..+ +|+... .....++++
T Consensus 210 dp~~g~ly~td-~~~~~~I~~~~~dG~~~~~~~~~----~l~~P~glavd~~~~--~lY~aD---------~~~~~I~~~ 273 (400)
T 3p5b_L 210 DPVHGFMYWTD-WGTPAKIKKGGLNGVDIYSLVTE----NIQWPNGITLDLLSG--RLYWVD---------SKLHSISSI 273 (400)
T ss_dssp ETTTTEEEEEE-CSSSCCEEEEETTSCSCEEEECS----SCSCEEEEEEETTTT--EEEEEE---------TTTTEEEEE
T ss_pred ecccCeEEEEe-CCCCCEEEEEeCCCCccEEEEEC----CCCceEEEEEEeCCC--EEEEEE---------CCCCEEEEE
Confidence 34455555544 11124555555544333332211 011256888887654 333332 235677777
Q ss_pred EeCCCceEecC-C---CCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCc-eeeEe
Q 047073 203 TIGTNTWRNIG-D---LPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE-QFRQF 259 (316)
Q Consensus 203 ~s~t~~W~~~~-~---~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~-~~~~i 259 (316)
+.....-+.+. . ++.+. .-...+|.+||.... ...|.++|..+. .-..+
T Consensus 274 d~dG~~~~~~~~~~~~l~~P~----gl~v~~~~lywtd~~----~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 274 DVNGGNRKTILEDEKRLAHPF----SLAVFEDKVFWTDII----NEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp ETTSCCCEEEEECSSTTSSEE----EEEEETTEEEEEESS----SCSEEEEESSSCCCCEEE
T ss_pred eCCCCccEEEEeCCCCCCCCE----EEEEeCCEEEEecCC----CCeEEEEEcCCCCceEEE
Confidence 76544322221 1 11111 112367889999876 457999995433 33344
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=69.41 E-value=42 Score=26.88 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=77.7
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
..+|.+.+.+.. ...++++++-+........... ....++.+|+.. . +.... .....+.+|+
T Consensus 116 ~~~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g-~--l~v~~---------~~~~~i~~~~ 177 (270)
T 1rwi_B 116 DTQGAVYVADRG--NNRVVKLAAGSKTQTVLPFTGL----NDPDGVAVDNSG-N--VYVTD---------TDNNRVVKLE 177 (270)
T ss_dssp CTTCCEEEEEGG--GTEEEEECTTCCSCEECCCCSC----CSCCCEEECTTC-C--EEEEE---------GGGTEEEEEC
T ss_pred CCCCCEEEEECC--CCEEEEEECCCceeEeeccccC----CCceeEEEeCCC-C--EEEEE---------CCCCEEEEEe
Confidence 346777666523 5678888877766544332211 113456666632 2 33322 1134677777
Q ss_pred eCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE
Q 047073 204 IGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS 281 (316)
Q Consensus 204 s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~ 281 (316)
..++.-........ ....++.+ +|.+|+.... ...|..||+.+.....+.. .. .. ....++..
T Consensus 178 ~~~~~~~~~~~~~~---~~p~~i~~d~~g~l~v~~~~----~~~v~~~~~~~~~~~~~~~-~~-~~------~p~~i~~~ 242 (270)
T 1rwi_B 178 AESNNQVVLPFTDI---TAPWGIAVDEAGTVYVTEHN----TNQVVKLLAGSTTSTVLPF-TG-LN------TPLAVAVD 242 (270)
T ss_dssp TTTCCEEECCCSSC---CSEEEEEECTTCCEEEEETT----TSCEEEECTTCSCCEECCC-CS-CS------CEEEEEEC
T ss_pred cCCCceEeecccCC---CCceEEEECCCCCEEEEECC----CCcEEEEcCCCCcceeecc-CC-CC------CceeEEEC
Confidence 66654332211110 11123444 5766665543 3479999998765444322 11 11 22334443
Q ss_pred -CCeEEEEEccCCCeEEEEEEeeC
Q 047073 282 -GGFLYLCDGFLEPNLDIWIMKKY 304 (316)
Q Consensus 282 -~G~L~lv~~~~~~~~~vW~l~~~ 304 (316)
+|+|++.... +..+.++.+.+.
T Consensus 243 ~~g~l~v~~~~-~~~v~~~~~~~~ 265 (270)
T 1rwi_B 243 SDRTVYVADRG-NDRVVKLTSLEH 265 (270)
T ss_dssp TTCCEEEEEGG-GTEEEEECCCGG
T ss_pred CCCCEEEEECC-CCEEEEEcCCCc
Confidence 6788877775 788888887653
No 40
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=69.11 E-value=52 Score=27.81 Aligned_cols=124 Identities=8% Similarity=-0.089 Sum_probs=64.6
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceE-ecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHL-VLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~-~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
+..+.+|.+.+.+.. ...+.++||.|++.. .++............++.++ +.. ++.... .....+
T Consensus 89 i~~~~~g~lyv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~---~~~-lyv~~~--------~~~~~v 154 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIW--DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY---GKY-VYVNCW--------SYQNRI 154 (328)
T ss_dssp EEEEETTEEEEEEBS--CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE---TTE-EEEEEC--------TTCCEE
T ss_pred EEEeCCCeEEEEECC--CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE---CCE-EEEEcC--------CCCCEE
Confidence 344456777666522 679999999998865 45433210000011233332 222 332221 124678
Q ss_pred EEEEeCCCceEe-cCCCCceeccCCcceeeCCeEEEEEecCCCC------ccEEEEEeCCCceee-EecC
Q 047073 200 EVHTIGTNTWRN-IGDLPYVLNQPYYGAFLNSALHWYAHSHDKR------TAFMCSFDLGDEQFR-QFPG 261 (316)
Q Consensus 200 ~vy~s~t~~W~~-~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~------~~~i~~fD~~~~~~~-~i~l 261 (316)
.+++..++.... +.. ... +..-.+.-+|.+|..+...... ...|.++|+++.+.. .+.+
T Consensus 155 ~viD~~t~~~~~~i~~-g~~--p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 155 LKIDTETDKVVDELTI-GIQ--PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEETTTTEEEEEEEC-SSC--BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCeEEEEEEc-CCC--ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 999999886532 211 100 1111222368876665442110 158999999988664 4566
No 41
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=68.76 E-value=45 Score=27.01 Aligned_cols=116 Identities=8% Similarity=0.012 Sum_probs=62.5
Q ss_pred eeeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 120 SLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 120 ~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
.+....+|-+.+.... ...+.++||. ++...++.+. ......++..|+.. . +.... .....+
T Consensus 24 ~i~~d~~g~l~v~~~~--~~~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g-~--l~v~~---------~~~~~v 85 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHK--ANKISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLG-D--IWFTE---------NGANKI 85 (300)
T ss_dssp EEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTS-C--EEEEE---------TTTTEE
T ss_pred eeeECCCCCEEEEcCC--CCeEEEECCC-CceEEEECCC---CCCcceeEEECCCC-C--EEEEe---------cCCCeE
Confidence 3444557777766523 5789999998 7766544321 11235566666532 2 22221 123457
Q ss_pred EEEEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 200 EVHTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 200 ~vy~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
.+|+.. +..+........ ....++.+ +|.+|..... ...|..||.+ .....+.+
T Consensus 86 ~~~d~~-g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~----~~~i~~~~~~-g~~~~~~~ 141 (300)
T 2qc5_A 86 GKLSKK-GGFTEYPLPQPD--SGPYGITEGLNGDIWFTQLN----GDRIGKLTAD-GTIYEYDL 141 (300)
T ss_dssp EEECTT-SCEEEEECSSTT--CCEEEEEECSTTCEEEEETT----TTEEEEECTT-SCEEEEEC
T ss_pred EEECCC-CCeEEecCCCCC--CCCccceECCCCCEEEEccC----CCeEEEECCC-CCEEEccC
Confidence 777766 655543211000 11113333 5777665443 3489999998 66665555
No 42
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=68.17 E-value=48 Score=27.08 Aligned_cols=67 Identities=15% Similarity=0.236 Sum_probs=40.4
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
|.+|+|.... ++.+.|||..|++...+-... .....+..+.+.+.. ++-+ .. .....+.+++
T Consensus 34 S~~~~lAvg~----D~tV~iWd~~tg~~~~~~~~~--~~~~~V~~v~~~~~~-~~l~--sg---------s~Dg~v~iw~ 95 (318)
T 4ggc_A 34 SSGNVLAVAL----DNSVYLWSASSGDILQLLQME--QPGEYISSVAWIKEG-NYLA--VG---------TSSAEVQLWD 95 (318)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECC--STTCCEEEEEECTTS-SEEE--EE---------ETTSEEEEEE
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEec--CCCCeEEEEEECCCC-CEEE--EE---------ECCCcEEEee
Confidence 5577665544 678999999999876543221 122235667776643 3322 22 1245688888
Q ss_pred eCCCc
Q 047073 204 IGTNT 208 (316)
Q Consensus 204 s~t~~ 208 (316)
..++.
T Consensus 96 ~~~~~ 100 (318)
T 4ggc_A 96 VQQQK 100 (318)
T ss_dssp TTTTE
T ss_pred cCCce
Confidence 87774
No 43
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=65.98 E-value=59 Score=27.30 Aligned_cols=153 Identities=12% Similarity=0.162 Sum_probs=67.2
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
+|-+++.... ++.+.+||..++.+..+-.... ....+..+.+++..+...++... ....+.+|+..
T Consensus 164 ~~~~l~s~s~--D~~i~iW~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~s----------~D~~v~iw~~~ 229 (330)
T 2hes_X 164 SEALLASSSY--DDTVRIWKDYDDDWECVAVLNG--HEGTVWSSDFDKTEGVFRLCSGS----------DDSTVRVWKYM 229 (330)
T ss_dssp SSSEEEEEET--TSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCSSSSCEEEEEE----------TTSCEEEEEEE
T ss_pred CCCEEEEEcC--CCeEEEEECCCCCeeEEEEccC--CCCcEEEEEecCCCCeeEEEEEe----------CCCeEEEEEec
Confidence 4544444323 6788899887764433222211 22235666776654344444322 13456666554
Q ss_pred CC------ceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccce
Q 047073 206 TN------TWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSI 276 (316)
Q Consensus 206 t~------~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~ 276 (316)
++ .|......+......-..+.+ +|.+.- +.. ...|..+|..+..|..+ .....+... ...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s-~~~----dg~v~iw~~~~~~~~~~~~~~~~h~~~-----~v~ 299 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIAS-VGA----DGVLAVYEEVDGEWKVFAKRALCHGVY-----EIN 299 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEE-EET----TSCEEEEEEETTEEEEEEEESCTTTTS-----CEE
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCCEEEE-EeC----CCEEEEEEcCCCceEEEeccccccccc-----eEE
Confidence 32 343322111000000001111 332222 222 34788899888777554 220111110 111
Q ss_pred EEEEE---CCeEEEEEccCCCeEEEEEEee
Q 047073 277 SVGVS---GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 277 ~L~~~---~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
.+... +|++.+... .+.++.||-++.
T Consensus 300 ~v~~~~~~~~~~las~s-~Dg~v~~W~~~~ 328 (330)
T 2hes_X 300 VVKWLELNGKTILATGG-DDGIVNFWSLEK 328 (330)
T ss_dssp EEEEC-----CCEEEEE-TTSEEEEEEC--
T ss_pred EEEEecCCCceEEEEec-CCCcEEEEEecc
Confidence 22222 455554444 389999998764
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=65.91 E-value=59 Score=27.27 Aligned_cols=141 Identities=10% Similarity=0.077 Sum_probs=68.1
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.|||..++....+-.... ....+..+.+.+..+.-.++... ....+.+|+..++.|..+.....
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~ 99 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCS----------YDGKVLIWKEENGRWSQIAVHAV 99 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEE----------TTSCEEEEEEETTEEEEEEEECC
T ss_pred CCcEEEEecCCCcceeeeEecC--CCCcEEEEEeCCCCCCCEEEEec----------cCCEEEEEEcCCCceeEeeeecC
Confidence 6778888877443332222211 22235566665442222223221 13568899999888765432111
Q ss_pred eeccCCcceee--C--CeEEEEEecCCCCccEEEEEeCCCcee-eEecCCCCccccCCCCccceEEEEE-----------
Q 047073 218 VLNQPYYGAFL--N--SALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPINSISVGVS----------- 281 (316)
Q Consensus 218 ~~~~~~~~v~~--~--G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~~~~~L~~~----------- 281 (316)
. ...-.++.+ + |.+...+.. ...|..+|+.+..- ..+.+ ..... ....+...
T Consensus 100 ~-~~~v~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~-~~~~~------~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 100 H-SASVNSVQWAPHEYGPLLLVASS----DGKVSVVEFKENGTTSPIII-DAHAI------GVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp C-SSCEEEEEECCGGGCSEEEEEET----TSEEEEEECCTTSCCCEEEE-ECCTT------CEEEEEECCCC--------
T ss_pred C-CcceEEEEeCCCCCCCEEEEecC----CCcEEEEecCCCCceeeEEe-cCCCC------ceEEEEEcCcccccccccc
Confidence 0 000112222 2 444444444 35888999877622 22222 11110 11122222
Q ss_pred ---CCeEEEEEccCCCeEEEEEEee
Q 047073 282 ---GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 282 ---~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
+|.+.++... +..+.+|-+..
T Consensus 168 ~~~~~~~l~~~~~-dg~i~i~d~~~ 191 (379)
T 3jrp_A 168 GTKESRKFVTGGA-DNLVKIWKYNS 191 (379)
T ss_dssp --CTTCEEEEEET-TSCEEEEEEET
T ss_pred CCCCCCEEEEEeC-CCeEEEEEecC
Confidence 4666666554 78899998864
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=65.36 E-value=66 Score=27.66 Aligned_cols=53 Identities=17% Similarity=0.326 Sum_probs=31.9
Q ss_pred ccEEEEEeCCCcee--eEecCCCCccccCCCCccceEEEEECCeEEEEEccCCCeEEEEEEeeC
Q 047073 243 TAFMCSFDLGDEQF--RQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIWIMKKY 304 (316)
Q Consensus 243 ~~~i~~fD~~~~~~--~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~vW~l~~~ 304 (316)
...|..+|+.+..- ..+.. .... ....+...+|++.+.... +..+.+|.+.+.
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~-~~~~-------~v~~~~~~~~~~l~s~~~-d~~v~iw~~~~~ 366 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLI-NEGT-------PINNVYFAAGALFVSSGF-DTSIKLDIISDP 366 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEE-STTS-------CEEEEEEETTEEEEEETT-TEEEEEEEECCT
T ss_pred CCeEEEEEcCCCcCchhhhhc-cCCC-------CceEEEeCCCCEEEEecC-CccEEEEeccCC
Confidence 45899999987532 22222 1100 222344557876666554 899999999763
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=65.35 E-value=60 Score=27.17 Aligned_cols=137 Identities=14% Similarity=0.100 Sum_probs=71.1
Q ss_pred ceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCC---CceEecCCC
Q 047073 139 DIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGT---NTWRNIGDL 215 (316)
Q Consensus 139 ~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t---~~W~~~~~~ 215 (316)
..++++||.+++...+... .....++.+++..+ .++... .....+.+|+..+ +..+.....
T Consensus 165 g~v~~~d~~~~~~~~~~~~-----~~~p~gia~~~dg~--~lyv~d---------~~~~~I~~~~~~~~~~~~~~~~~~~ 228 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKE-----LHVPGGAEVSADSS--FVLVAE---------FLSHQIVKYWLEGPKKGTAEVLVKI 228 (322)
T ss_dssp EEEEEEETTTTEEEEEEEE-----ESCCCEEEECTTSS--EEEEEE---------GGGTEEEEEESSSTTTTCEEEEEEC
T ss_pred ceEEEEeCCCCEEEEeccC-----CccCcceEECCCCC--EEEEEe---------CCCCeEEEEECCCCcCCccceEEeC
Confidence 5788999988876543211 01123566655321 122221 1134567777654 233332211
Q ss_pred CceeccCCccee--eCCeEEEEEecCC-------CCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEECCeEE
Q 047073 216 PYVLNQPYYGAF--LNSALHWYAHSHD-------KRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLY 286 (316)
Q Consensus 216 ~~~~~~~~~~v~--~~G~lywl~~~~~-------~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~ 286 (316)
+. ..++. -+|.+ |++.... .....|..||.+.+....+.. |...... ....++..+|+|+
T Consensus 229 ~g-----P~gi~~d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~----~~~~~~~~~g~L~ 297 (322)
T 2fp8_A 229 PN-----PGNIKRNADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGE----HFEQIQEHDGLLY 297 (322)
T ss_dssp SS-----EEEEEECTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTS----CCCEEEEETTEEE
T ss_pred CC-----CCCeEECCCCCE-EEEecCcccccccCCCccEEEEECCCCCEEEEEEC-CCCCccc----cceEEEEeCCEEE
Confidence 11 11233 35775 4444310 002479999999888888888 4322111 2223445688999
Q ss_pred EEEccCCCeEEEEEEee
Q 047073 287 LCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 287 lv~~~~~~~~~vW~l~~ 303 (316)
+.... +..+.++.++.
T Consensus 298 v~~~~-~~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLF-HGSVGILVYDK 313 (322)
T ss_dssp EECSS-CSEEEEEEC--
T ss_pred EeecC-CCceEEEeccc
Confidence 88775 67777777653
No 47
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=64.55 E-value=63 Score=27.15 Aligned_cols=141 Identities=12% Similarity=-0.020 Sum_probs=74.4
Q ss_pred ceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCC--ceEecCCCC
Q 047073 139 DIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTN--TWRNIGDLP 216 (316)
Q Consensus 139 ~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~--~W~~~~~~~ 216 (316)
..++++|+.|++....-.. .......++.+|+... ++... .....+.+|+.... .=..+....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~---~~~~~p~gia~d~~g~---l~v~d---------~~~~~v~~~~~~g~~~~~~~~~~~~ 133 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK---NLFYLPHGLSIDTDGN---YWVTD---------VALHQVFKLDPHSKEGPLLILGRSM 133 (329)
T ss_dssp CCEEEECTTTCCEEEEECT---TTCSSEEEEEECTTSC---EEEEE---------TTTTEEEEECTTCSSCCSEEESBTT
T ss_pred CcEEEEECCCCeEEeccCC---CccCCceEEEECCCCC---EEEEE---------CCCCEEEEEeCCCCeEEEEEecccC
Confidence 4699999999987643221 1222366788886433 33322 22456777776543 112222110
Q ss_pred -----ceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCc-----cccCCCCccceEEEEE-C
Q 047073 217 -----YVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTR-----EYEKCRPINSISVGVS-G 282 (316)
Q Consensus 217 -----~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~-----~~~~~~~~~~~~L~~~-~ 282 (316)
........++.+ +|.+|+..... ...|..||........+..+... .... ....++.. +
T Consensus 134 ~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~----~p~gia~d~~ 206 (329)
T 3fvz_A 134 QPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC---NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFS----VPHSLALVPH 206 (329)
T ss_dssp BCCCSTTCCSSEEEEEECTTTCCEEEEECSS---CCEEEEECTTSCEEEEECEECCSSSCCTTEES----CEEEEEEETT
T ss_pred CCCCCccccCCCcEEEEeCCCCeEEEEeCCC---CCeEEEEcCCCCEEEEeccCCCCCCCCCcccC----CCcEEEEECC
Confidence 000111124444 68888887422 35899999777666655321111 0000 22334444 3
Q ss_pred -CeEEEEEccCCCeEEEEEEe
Q 047073 283 -GFLYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 283 -G~L~lv~~~~~~~~~vW~l~ 302 (316)
|.|++.... +..+.+|-.+
T Consensus 207 ~g~l~v~d~~-~~~I~~~~~~ 226 (329)
T 3fvz_A 207 LDQLCVADRE-NGRIQCFKTD 226 (329)
T ss_dssp TTEEEEEETT-TTEEEEEETT
T ss_pred CCEEEEEECC-CCEEEEEECC
Confidence 778777765 6778777764
No 48
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=64.37 E-value=69 Score=30.85 Aligned_cols=100 Identities=10% Similarity=0.071 Sum_probs=51.6
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.|||..++....+..... ....+..+.+.+..+.-.++... ....+.+|+..++.|..+.....
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~--h~~~V~~l~~s~~~~~~~l~s~s----------~Dg~I~vwd~~~~~~~~~~~~~~ 97 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCS----------YDGKVLIWKEENGRWSQIAVHAV 97 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECC--CSSCEEEEEECCTTSCSEEEEEE----------TTSCEEEEEEETTEEEEEEEECC
T ss_pred CCcEEEEecCCCCCccceeccC--CcCceEEEEecCCCCCCEEEEEe----------CCCeEEEEECCCCcccccccccC
Confidence 6788888877544333322211 22336677776553222333222 24568899998887755432110
Q ss_pred eeccCCcceee--C--CeEEEEEecCCCCccEEEEEeCCCc
Q 047073 218 VLNQPYYGAFL--N--SALHWYAHSHDKRTAFMCSFDLGDE 254 (316)
Q Consensus 218 ~~~~~~~~v~~--~--G~lywl~~~~~~~~~~i~~fD~~~~ 254 (316)
. ...-.++.+ + |.+...+.. ...|..+|+.+.
T Consensus 98 h-~~~V~~v~~sp~~~~~~l~sgs~----dg~I~vwdl~~~ 133 (753)
T 3jro_A 98 H-SASVNSVQWAPHEYGPLLLVASS----DGKVSVVEFKEN 133 (753)
T ss_dssp C-SSCEEEEEECCGGGCSEEEEEET----TSEEEEEECCSS
T ss_pred C-CCCeEEEEECCCCCCCEEEEEeC----CCcEEEEEeecC
Confidence 0 000112222 2 554444444 458889998776
No 49
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=64.36 E-value=63 Score=27.05 Aligned_cols=107 Identities=6% Similarity=-0.137 Sum_probs=63.7
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEe--cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLV--LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~--lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
.+|.|..+.+. .+++.++|+.|++... +|+. .++-|.....+ ++.... -....+.||
T Consensus 63 ~~~~Ly~stG~--~g~v~~iD~~Tgkv~~~~l~~~--------~FgeGit~~g~--~Ly~lt---------w~~~~v~V~ 121 (268)
T 3nok_A 63 HQGHFFESTGH--QGTLRQLSLESAQPVWMERLGN--------IFAEGLASDGE--RLYQLT---------WTEGLLFTW 121 (268)
T ss_dssp ETTEEEEEETT--TTEEEECCSSCSSCSEEEECTT--------CCEEEEEECSS--CEEEEE---------SSSCEEEEE
T ss_pred ECCEEEEEcCC--CCEEEEEECCCCcEEeEECCCC--------cceeEEEEeCC--EEEEEE---------ccCCEEEEE
Confidence 36777777644 5679999999998443 3322 22433333333 232222 225778999
Q ss_pred EeCCCceE-ecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCc-eeeEecC
Q 047073 203 TIGTNTWR-NIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE-QFRQFPG 261 (316)
Q Consensus 203 ~s~t~~W~-~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~-~~~~i~l 261 (316)
+..+..=. .++.. ....++..+|...|++.. ...|..+|+++. .-..|+.
T Consensus 122 D~~Tl~~~~ti~~~-----~eGwGLt~Dg~~L~vSdG----s~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 122 SGMPPQRERTTRYS-----GEGWGLCYWNGKLVRSDG----GTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ETTTTEEEEEEECS-----SCCCCEEEETTEEEEECS----SSEEEEECTTTCCEEEEEEC
T ss_pred ECCcCcEEEEEeCC-----CceeEEecCCCEEEEECC----CCEEEEEcCCCCeEEEEEEe
Confidence 98887432 22211 123367777877777653 458999999885 4455555
No 50
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=63.99 E-value=47 Score=27.33 Aligned_cols=70 Identities=10% Similarity=-0.028 Sum_probs=39.0
Q ss_pred cCCcceeeCCeEEEEEecCCCCccEEEEEeCCCcee-eEecCCCCccccCCCCccceEEEEECCeEEEEEccCCCeEEEE
Q 047073 221 QPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIW 299 (316)
Q Consensus 221 ~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~vW 299 (316)
.+..++.++|...|.+....+ +..|..+|+++.+- ..+++|+. . ...-++..+++|+++.-. +..+-|+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g-~S~v~~vD~~tgkv~~~~~l~~~-~-------fgeGi~~~~~~ly~ltw~-~~~v~v~ 90 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG-RSSVRKVDLETGRILQRAEVPPP-Y-------FGAGIVAWRDRLIQLTWR-NHEGFVY 90 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT-SCEEEEEETTTCCEEEEEECCTT-C-------CEEEEEEETTEEEEEESS-SSEEEEE
T ss_pred cccccEEEECCEEEEECCCCC-CceEEEEECCCCCEEEEEeCCCC-c-------ceeEEEEeCCEEEEEEee-CCEEEEE
Confidence 334455554444444433222 45899999998754 66688433 2 223455567788777643 4444444
Q ss_pred E
Q 047073 300 I 300 (316)
Q Consensus 300 ~ 300 (316)
-
T Consensus 91 D 91 (243)
T 3mbr_X 91 D 91 (243)
T ss_dssp E
T ss_pred E
Confidence 3
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=62.86 E-value=64 Score=26.61 Aligned_cols=51 Identities=6% Similarity=-0.100 Sum_probs=26.8
Q ss_pred CeEEEEEeC--CCceEecCCCCceeccCCcce--eeCCeEEEEEecCCCCccEEEEEeCC
Q 047073 197 PQVEVHTIG--TNTWRNIGDLPYVLNQPYYGA--FLNSALHWYAHSHDKRTAFMCSFDLG 252 (316)
Q Consensus 197 ~~~~vy~s~--t~~W~~~~~~~~~~~~~~~~v--~~~G~lywl~~~~~~~~~~i~~fD~~ 252 (316)
..+.+|+.. ++.++.+...+... ....+ .-+|...+.+... ...|..||+.
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~---~~~i~~~d~~ 114 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSYN---AGNVSVTRLE 114 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEETT---TTEEEEEEEE
T ss_pred CeEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEecC---CCeEEEEECC
Confidence 678888877 77776543221111 11122 2356644444432 3468888883
No 52
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=62.57 E-value=72 Score=27.12 Aligned_cols=97 Identities=10% Similarity=-0.011 Sum_probs=52.1
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.+||..+++....-... .....+.+++.. .+-++ .. .....+.+++..++.-...-....
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg-~~l~~-~~---------~~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVG-----SNPMGAVISPDG-TKVYV-AN---------AHSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTS-SEEEE-EE---------GGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEECCCCeEEEEeecC-----CCcceEEECCCC-CEEEE-EC---------CCCCeEEEEECCCCeEEEEEECCC
Confidence 678999999998865422111 124566666642 22222 21 123578889988875432211111
Q ss_pred eeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceee
Q 047073 218 VLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFR 257 (316)
Q Consensus 218 ~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~ 257 (316)
. -.++.+ +|...+++... ...|..+|+.+.+..
T Consensus 75 ~----v~~~~~spdg~~l~~~~~~---~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 75 S----PQGVAVSPDGKQVYVTNMA---SSTLSVIDTTSNTVA 109 (391)
T ss_dssp S----EEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEE
T ss_pred C----ccceEECCCCCEEEEEECC---CCEEEEEECCCCeEE
Confidence 1 112222 46644444432 358999999987653
No 53
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=61.41 E-value=60 Score=25.85 Aligned_cols=136 Identities=13% Similarity=0.034 Sum_probs=70.9
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCC-CceEecCCCC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGT-NTWRNIGDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t-~~W~~~~~~~ 216 (316)
...++++|+.+++...+.... .....+.+.|.. .+-++ .. ...+.+++..+ +....+....
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg-~~l~~--~~----------~~~i~~~d~~~~~~~~~~~~~~ 82 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDG-KYLLL--NS----------EGLLYRLSLAGDPSPEKVDTGF 82 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTS-SEEEE--EE----------TTEEEEEESSSCCSCEECCCTT
T ss_pred ceeEEEEeCCCCceeeeccCC-----cceEeeEECCCC-CEEEE--Ec----------CCeEEEEeCCCCCCceEecccc
Confidence 678999999999877654332 124466666643 33222 11 24688899888 7666554222
Q ss_pred ceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCeEEE-EEccCCC
Q 047073 217 YVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGFLYL-CDGFLEP 294 (316)
Q Consensus 217 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~L~l-v~~~~~~ 294 (316)
.......-...-+|...............|..+|+.+.....+.. .... ..+... +|+..+ ... .+.
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~---------~~~~~spdg~~l~~~~~-~~~ 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK-NLPS---------YWHGWSPDGKSFTYCGI-RDQ 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS-SSSE---------EEEEECTTSSEEEEEEE-ETT
T ss_pred ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeec-CCCc---------cceEECCCCCEEEEEEC-CCC
Confidence 100001111223565444433211114588889988776555433 1111 111222 555433 443 367
Q ss_pred eEEEEEEe
Q 047073 295 NLDIWIMK 302 (316)
Q Consensus 295 ~~~vW~l~ 302 (316)
.+.||.++
T Consensus 152 ~~~l~~~~ 159 (297)
T 2ojh_A 152 VFDIYSMD 159 (297)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEE
Confidence 78888875
No 54
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=61.17 E-value=86 Score=30.08 Aligned_cols=112 Identities=11% Similarity=0.017 Sum_probs=54.5
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
.+|.|.+.+.. ...+.++++-.+....+-.... ....++.+|+..+. |+.... .....+++++.
T Consensus 463 ~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~~----~~P~giavDp~~g~--ly~td~--------~~~~~I~~~~~ 526 (699)
T 1n7d_A 463 IHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQG----SKPRAIVVDPVHGF--MYWTDW--------GTPAKIKKGGL 526 (699)
T ss_dssp SSSBCEECCTT--TSCEEEEBSSSCCEEEECCCSS----CCCCCEECCSSSSC--CEECCC--------SSSCCEEBCCS
T ss_pred eCCcEEEEecc--CCeEEEEecCCCceEEEEeCCC----CCcceEEEccCCCc--EEEccc--------CCCCeEEEEeC
Confidence 45555555422 5678888887766554432211 11235566665332 111110 01134444443
Q ss_pred CCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe
Q 047073 205 GTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF 259 (316)
Q Consensus 205 ~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i 259 (316)
....-+.+... .....+++.+ +|.|||.... ...|.+||+.+..-+.+
T Consensus 527 dG~~~~~l~~~---~l~~PnGlavd~~~~~LY~aD~~----~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 527 NGVDIYSLVTE---NIQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTI 577 (699)
T ss_dssp SSCCCCEESCS---SCSSCCCEEECTTTCCEEEEETT----TTEEEEECSSSSCCEEE
T ss_pred CCCCeeEEEeC---CCCCccEEEEeccCCEEEEEecC----CCeEEEEccCCCceEEE
Confidence 32221222110 0112235555 4889998765 46899999976544433
No 55
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=59.67 E-value=73 Score=26.28 Aligned_cols=103 Identities=3% Similarity=-0.087 Sum_probs=50.1
Q ss_pred CCeEEEEEeCCCce-EecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCc--cccCCC
Q 047073 196 KPQVEVHTIGTNTW-RNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTR--EYEKCR 271 (316)
Q Consensus 196 ~~~~~vy~s~t~~W-~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~--~~~~~~ 271 (316)
...+.+|+..++.. +.+...+.......-.+.-+|...+++..+ ...|..+|+++.+...+ .+ +.. .....
T Consensus 197 ~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~- 271 (331)
T 3u4y_A 197 GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTES---TVDVFNFNQLSGTLSFVKSF-GHGLLIDPRP- 271 (331)
T ss_dssp TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSS---EEEEEEEETTTTEEEEEEEE-ECCCCCCCGG-
T ss_pred CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcC---CCEEEEEECCCCceeeeccc-ccccccCCCC-
Confidence 46788999887764 111111110000111222367755555443 45799999998877554 22 111 00000
Q ss_pred CccceEEEE-ECCeEEEEEccCCCeEEEEEEee
Q 047073 272 PINSISVGV-SGGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 272 ~~~~~~L~~-~~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
......+.. -+|+..++....+..+.||-+.+
T Consensus 272 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 272 LFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp GTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred cccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 001011233 35664444443478999998754
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=59.19 E-value=69 Score=25.83 Aligned_cols=112 Identities=11% Similarity=-0.008 Sum_probs=59.5
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
..+|.+.+.+.. ...++++||. ++...++.+. ......++.+|+... +.... .....+.+|+
T Consensus 112 ~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~d~~g~---l~v~~---------~~~~~i~~~~ 173 (300)
T 2qc5_A 112 GLNGDIWFTQLN--GDRIGKLTAD-GTIYEYDLPN---KGSYPAFITLGSDNA---LWFTE---------NQNNSIGRIT 173 (300)
T ss_dssp CSTTCEEEEETT--TTEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSS---EEEEE---------TTTTEEEEEC
T ss_pred CCCCCEEEEccC--CCeEEEECCC-CCEEEccCCC---CCCCceeEEECCCCC---EEEEe---------cCCCeEEEEC
Confidence 346777666522 5689999998 6655443221 112255677776432 22221 1234566776
Q ss_pred eCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 204 IGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 204 s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
. ++....... +.. .....++.+ +|.+|+.... ...|..||. +..+..+.+
T Consensus 174 ~-~g~~~~~~~-~~~-~~~~~~i~~d~~g~l~v~~~~----~~~i~~~~~-~g~~~~~~~ 225 (300)
T 2qc5_A 174 N-TGKLEEYPL-PTN-AAAPVGITSGNDGALWFVEIM----GNKIGRITT-TGEISEYDI 225 (300)
T ss_dssp T-TCCEEEEEC-SST-TCCEEEEEECTTSSEEEEETT----TTEEEEECT-TCCEEEEEC
T ss_pred C-CCcEEEeeC-CCC-CCCcceEEECCCCCEEEEccC----CCEEEEEcC-CCcEEEEEC
Confidence 6 555554321 100 011113434 5777765544 347999999 556666656
No 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=58.93 E-value=1.4e+02 Score=29.23 Aligned_cols=109 Identities=11% Similarity=0.054 Sum_probs=56.7
Q ss_pred eeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 122 LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 122 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
++..+|.|.+.+ .....++.+.++-......|-... .....++.+|+..+ +|++.. .....+++
T Consensus 521 VDp~~g~LYwtD-~g~~~~I~~~~~dG~~~~~lv~~~----l~~P~GLavD~~~~--~LYwaD---------~~~~~I~~ 584 (791)
T 3m0c_C 521 VDPVHGFMYWTD-WGTPAKIKKGGLNGVDIYSLVTEN----IQWPNGITLDLLSG--RLYWVD---------SKLHSISS 584 (791)
T ss_dssp EETTTTEEEEEE-CSSSCEEEEEETTSCCEEEEECSS----CSCEEEEEEETTTT--EEEEEE---------TTTTEEEE
T ss_pred EecCCCCEEEec-CCCCCeEEEEecCCCceEEEEeCC----CCCceEEEEecCCC--eEEEEe---------CCCCcEEE
Confidence 344556666655 211245666666554444332211 12256888887654 333332 22456777
Q ss_pred EEeCCCceEec-CC---CCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCc
Q 047073 202 HTIGTNTWRNI-GD---LPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE 254 (316)
Q Consensus 202 y~s~t~~W~~~-~~---~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~ 254 (316)
++.....-+.+ .. ++.+. .-...++.|||.... ...|.++|..+.
T Consensus 585 ~d~dG~~~~~v~~~~~~l~~P~----glav~~~~lYwtD~~----~~~I~~~dk~tG 633 (791)
T 3m0c_C 585 IDVNGGNRKTILEDEKRLAHPF----SLAVFEDKVFWTDII----NEAIFSANRLTG 633 (791)
T ss_dssp EETTSCSCEEEEECTTTTSSEE----EEEEETTEEEEEETT----TTEEEEEETTTC
T ss_pred EecCCCceEEEecCCCccCCCC----EEEEeCCEEEEEECC----CCEEEEEeCCCC
Confidence 77654322222 11 12211 012357899999877 468999996544
No 58
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=58.20 E-value=78 Score=26.10 Aligned_cols=110 Identities=2% Similarity=-0.029 Sum_probs=61.1
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
+..+|-|++.+.. ...++.+||.+++...+.... ...++.+++..+ ++... ...+.+|
T Consensus 21 ~~~~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~dG~---l~v~~-----------~~~l~~~ 78 (297)
T 3g4e_A 21 EEVSNSLLFVDIP--AKKVCRWDSFTKQVQRVTMDA------PVSSVALRQSGG---YVATI-----------GTKFCAL 78 (297)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTTCCEEEEECSS------CEEEEEEBTTSS---EEEEE-----------TTEEEEE
T ss_pred ECCCCEEEEEECC--CCEEEEEECCCCcEEEEeCCC------ceEEEEECCCCC---EEEEE-----------CCeEEEE
Confidence 4446667666633 678999999998876543321 145677776533 22221 2467888
Q ss_pred EeCCCceEecCCCCce-eccCCccee--eCCeEEEEEecCC-------CCccEEEEEeCCCc
Q 047073 203 TIGTNTWRNIGDLPYV-LNQPYYGAF--LNSALHWYAHSHD-------KRTAFMCSFDLGDE 254 (316)
Q Consensus 203 ~s~t~~W~~~~~~~~~-~~~~~~~v~--~~G~lywl~~~~~-------~~~~~i~~fD~~~~ 254 (316)
+..++..+.+...... .....+.+. -+|.+|.-..... .....|..+|....
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 140 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH 140 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC
Confidence 8888877665322110 000011232 3688665443321 01357888888653
No 59
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=58.06 E-value=27 Score=25.37 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=29.7
Q ss_pred CceEEEEcCCCC-ceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEE
Q 047073 138 QDIISVCNPILG-DHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQIL 184 (316)
Q Consensus 138 ~~~~~v~NP~T~-~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~ 184 (316)
.-+++.+||.|+ .|...-... ..+.+.+|+..+.|+|+...
T Consensus 10 rA~V~~~D~~tk~~W~p~g~~~------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTSKHA------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEEESCSSC------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCCceEeCCCCc------eEEEEEEcCCCCEEEEEEcc
Confidence 568999999996 896432221 25667778888889998753
No 60
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=57.59 E-value=86 Score=26.39 Aligned_cols=114 Identities=7% Similarity=-0.115 Sum_probs=62.4
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCce-EecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDH-LVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~-~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
.++.+.+.... ...+.|+|+.|++. ..+|.... ..++.+++. . +++... .....+.+++
T Consensus 52 ~~~~lyv~~~~--~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~--g-~lyv~~---------~~~~~v~~iD 111 (328)
T 3dsm_A 52 RDGIGWIVVNN--SHVIFAIDINTFKEVGRITGFTS------PRYIHFLSD--E-KAYVTQ---------IWDYRIFIIN 111 (328)
T ss_dssp ETTEEEEEEGG--GTEEEEEETTTCCEEEEEECCSS------EEEEEEEET--T-EEEEEE---------BSCSEEEEEE
T ss_pred ECCEEEEEEcC--CCEEEEEECcccEEEEEcCCCCC------CcEEEEeCC--C-eEEEEE---------CCCCeEEEEE
Confidence 35556555423 67899999999987 45653322 345565443 2 444433 1246788899
Q ss_pred eCCCceE-ecCCCC--ceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCcee-eEecC
Q 047073 204 IGTNTWR-NIGDLP--YVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPG 261 (316)
Q Consensus 204 s~t~~W~-~~~~~~--~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~l 261 (316)
..++.-. .++... ........-+.-+|.+|...... ...|.++|+++.+. ..++.
T Consensus 112 ~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~---~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 112 PKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSY---QNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTT---CCEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCC---CCEEEEEECCCCeEEEEEEc
Confidence 8887532 221100 00000111122566777665421 34899999998765 34444
No 61
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=57.57 E-value=99 Score=27.14 Aligned_cols=136 Identities=12% Similarity=0.040 Sum_probs=66.9
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
+|.|.+.+.. ...+.++|+-.+....+-.. ......++.+|+..+. ++.... .....+++++..
T Consensus 170 ~~~lY~~d~~--~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~--ly~td~--------~~~~~I~~~~~d 233 (400)
T 3p5b_L 170 HSNIYWTDSV--LGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGF--MYWTDW--------GTPAKIKKGGLN 233 (400)
T ss_dssp TTEEEEEETT--TTEEEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTE--EEEEEC--------SSSCCEEEEETT
T ss_pred CCceEEEECC--CCeEEEEeCCCCceEEEEeC----CCCCcceEEEecccCe--EEEEeC--------CCCCEEEEEeCC
Confidence 3444444422 44566666655544333211 1112567888886542 222211 112456666654
Q ss_pred CCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEE
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVS 281 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~ 281 (316)
...=+.+.... .....++.+ +|.|||.... ...|.++|++...-..+ .. +.... ....|+..
T Consensus 234 G~~~~~~~~~~---l~~P~glavd~~~~~lY~aD~~----~~~I~~~d~dG~~~~~~~~~-~~~l~------~P~gl~v~ 299 (400)
T 3p5b_L 234 GVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTILED-EKRLA------HPFSLAVF 299 (400)
T ss_dssp SCSCEEEECSS---CSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCCCEEEEEC-SSTTS------SEEEEEEE
T ss_pred CCccEEEEECC---CCceEEEEEEeCCCEEEEEECC----CCEEEEEeCCCCccEEEEeC-CCCCC------CCEEEEEe
Confidence 33222221100 011123444 5899999765 46899999987644443 32 11111 33456667
Q ss_pred CCeEEEEEcc
Q 047073 282 GGFLYLCDGF 291 (316)
Q Consensus 282 ~G~L~lv~~~ 291 (316)
+|.|+.+...
T Consensus 300 ~~~lywtd~~ 309 (400)
T 3p5b_L 300 EDKVFWTDII 309 (400)
T ss_dssp TTEEEEEESS
T ss_pred CCEEEEecCC
Confidence 8888887753
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=57.17 E-value=85 Score=26.23 Aligned_cols=150 Identities=11% Similarity=0.091 Sum_probs=71.2
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
-+.+|-+++.... .+.+.|||..++++..+-.... .......+.+.+. +++-+ ... ....+.+|
T Consensus 16 ~s~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~-~~~l~--~~~---------~dg~i~vw 79 (372)
T 1k8k_C 16 WNKDRTQIAICPN--NHEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPD-SNRIV--TCG---------TDRNAYVW 79 (372)
T ss_dssp ECTTSSEEEEECS--SSEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETT-TTEEE--EEE---------TTSCEEEE
T ss_pred ECCCCCEEEEEeC--CCEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCC-CCEEE--EEc---------CCCeEEEE
Confidence 3345544433323 7789999998885322222111 1223667777773 33322 221 13568889
Q ss_pred EeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCce-e---eEecCCCCccccCCCCccce
Q 047073 203 TIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQ-F---RQFPGPPTREYEKCRPINSI 276 (316)
Q Consensus 203 ~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~-~---~~i~lPP~~~~~~~~~~~~~ 276 (316)
+..++.+......... ...-..+.+ +|.....+.. ...|..+|+.+.. + ..+.. +... ...
T Consensus 80 d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~----d~~v~i~d~~~~~~~~~~~~~~~-~~~~-------~i~ 146 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRI-NRAARCVRWAPNEKKFAVGSG----SRVISICYFEQENDWWVCKHIKK-PIRS-------TVL 146 (372)
T ss_dssp EEETTEEEEEEECCCC-SSCEEEEEECTTSSEEEEEET----TSSEEEEEEETTTTEEEEEEECT-TCCS-------CEE
T ss_pred ECCCCeeeeeEEeecC-CCceeEEEECCCCCEEEEEeC----CCEEEEEEecCCCcceeeeeeec-ccCC-------Cee
Confidence 9888876443211000 000011222 4554444443 2467777766553 2 22222 1111 122
Q ss_pred EEEEE-CCeEEEEEccCCCeEEEEEEe
Q 047073 277 SVGVS-GGFLYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 277 ~L~~~-~G~L~lv~~~~~~~~~vW~l~ 302 (316)
.+... +|++.++... +..+.+|-+.
T Consensus 147 ~~~~~~~~~~l~~~~~-dg~i~~~d~~ 172 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSC-DFKCRIFSAY 172 (372)
T ss_dssp EEEECTTSSEEEEEET-TSCEEEEECC
T ss_pred EEEEcCCCCEEEEEcC-CCCEEEEEcc
Confidence 23322 4555555543 7888888853
No 63
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=56.95 E-value=99 Score=29.66 Aligned_cols=80 Identities=8% Similarity=0.027 Sum_probs=40.9
Q ss_pred eEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCceeccCCcce-eeCCeEEEEEecCCCCcc
Q 047073 166 IRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPYVLNQPYYGA-FLNSALHWYAHSHDKRTA 244 (316)
Q Consensus 166 ~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~ 244 (316)
..++.+|+..+... ... .....+++|+.....-+.+....... ....++ ..++.+||.... ..
T Consensus 542 PnGlavd~~~~~LY--~aD---------~~~~~I~~~d~dG~~~~~~~~~~~~~-~~P~glavd~~~lywtd~~----~~ 605 (699)
T 1n7d_A 542 PNGITLDLLSGRLY--WVD---------SKLHSISSIDVNGGNRKTILEDEKRL-AHPFSLAVFEDKVFWTDII----NE 605 (699)
T ss_dssp CCCEEECTTTCCEE--EEE---------TTTTEEEEECSSSSCCEEECCCSSSC-SSCCCCEEETTEEEEECST----TT
T ss_pred ccEEEEeccCCEEE--EEe---------cCCCeEEEEccCCCceEEEEecCCcC-CCceEeEEECCEEEEEeCC----CC
Confidence 34677776544322 221 22456777776543333332111000 111122 245689999866 45
Q ss_pred EEEEEeCCCcee-eEecC
Q 047073 245 FMCSFDLGDEQF-RQFPG 261 (316)
Q Consensus 245 ~i~~fD~~~~~~-~~i~l 261 (316)
.|.++|..+.+. +.|..
T Consensus 606 ~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 606 AIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp CEEEEETTTEEEEECCCT
T ss_pred eEEEEEccCCCceEEeec
Confidence 899999876543 44433
No 64
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=56.52 E-value=84 Score=25.97 Aligned_cols=104 Identities=11% Similarity=0.165 Sum_probs=54.3
Q ss_pred ceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEe---cCCC
Q 047073 139 DIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRN---IGDL 215 (316)
Q Consensus 139 ~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~---~~~~ 215 (316)
..++.+||.+++...+. .. ....++.+++... .++.... .... .....+.+|+..++.... ....
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~----~~p~gl~~spdg~--~lyv~~~-~~~~---~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL----DHPNGLAFSPDEQ--TLYVSQT-PEQG---HGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE----SSEEEEEECTTSS--EEEEEEC-CC------CCCEEEEEEEETTEEEEEEEEECC
T ss_pred CeEEEEcCCCCcEEEEe--cC----CCCcceEEcCCCC--EEEEEec-CCcC---CCCCEEEEEEecCCCccCCeEEEEC
Confidence 57888999888876653 11 1134666666432 1222221 0000 112567778766543211 1011
Q ss_pred CceeccCCcce--eeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCC
Q 047073 216 PYVLNQPYYGA--FLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPT 264 (316)
Q Consensus 216 ~~~~~~~~~~v--~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~ 264 (316)
+ .....++ .-+|. .|++..+ .|.+||++.+....+.+ |.
T Consensus 237 ~---~~~pdgi~~d~~G~-lwv~~~~-----gv~~~~~~g~~~~~~~~-~~ 277 (305)
T 3dr2_A 237 P---DGLPDGFCVDRGGW-LWSSSGT-----GVCVFDSDGQLLGHIPT-PG 277 (305)
T ss_dssp S---SSCCCSEEECTTSC-EEECCSS-----EEEEECTTSCEEEEEEC-SS
T ss_pred C---CCCCCeEEECCCCC-EEEecCC-----cEEEECCCCCEEEEEEC-CC
Confidence 0 0111133 34688 4555432 69999999988888888 44
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=56.44 E-value=76 Score=26.81 Aligned_cols=149 Identities=9% Similarity=0.015 Sum_probs=66.5
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
+.+|-+++.... .+.+.|||..++.+..+-.... .......+.+.+.. .+ ++... ....+.+|+
T Consensus 20 s~~g~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~-~~--l~s~s---------~d~~v~vwd 83 (377)
T 3dwl_C 20 NSQRTEFVTTTA--TNQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKS-NR--IVTCS---------QDRNAYVYE 83 (377)
T ss_dssp CSSSSEEECCCS--SSCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTT-CC--EEEEE---------TTSSEEEC-
T ss_pred CCCCCEEEEecC--CCEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCC-CE--EEEEe---------CCCeEEEEE
Confidence 335544444323 6789999999886554444322 22336677776653 22 22221 135688888
Q ss_pred eCCCc-eEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCce----eeEecCCCCccccCCCCccce
Q 047073 204 IGTNT-WRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQ----FRQFPGPPTREYEKCRPINSI 276 (316)
Q Consensus 204 s~t~~-W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~----~~~i~lPP~~~~~~~~~~~~~ 276 (316)
..++. |........ ....-.++.+ +|.....+.. ...|..+|+.+.. ...+.. +... ...
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~-~h~~-------~v~ 150 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGSG----ARVISVCYFEQENDWWVSKHLKR-PLRS-------TIL 150 (377)
T ss_dssp -----CCCCEEECCC-CSSCEEEEECCTTSSCCEEEES----SSCEEECCC-----CCCCEEECS-SCCS-------CEE
T ss_pred cCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEec----CCeEEEEEECCcccceeeeEeec-ccCC-------CeE
Confidence 87775 433211100 0000011222 4443333333 3478888888764 233332 1111 222
Q ss_pred EEEEE-CCeEEEEEccCCCeEEEEEEe
Q 047073 277 SVGVS-GGFLYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 277 ~L~~~-~G~L~lv~~~~~~~~~vW~l~ 302 (316)
.+... +|++.++... +..+.+|-++
T Consensus 151 ~~~~~~~~~~l~~~~~-d~~i~iwd~~ 176 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCA-DRKAYVLSAY 176 (377)
T ss_dssp EEEECTTSSEEEEEES-SSCEEEEEEC
T ss_pred EEEEcCCCCEEEEEeC-CCEEEEEEEE
Confidence 33332 5665555554 7899999985
No 66
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=55.86 E-value=81 Score=25.61 Aligned_cols=144 Identities=7% Similarity=-0.012 Sum_probs=66.2
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.|||..+++..................+.+.+.......+... .....+.+++..++.-........
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~~~~i~lwd~~~~~~~~~~~~~~ 241 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG---------TSDRHIRIWNVCSGACLSAVDAHS 241 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEEC---------TTTCEEEEEETTTCCEEEEEECSS
T ss_pred CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEec---------CCCCEEEEEeccccccccccccee
Confidence 67788999888764332222111122224455555544443322221 234567777766654322211110
Q ss_pred eeccCCcceeeCCeEEEEE-ecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCeEEEEEccCCCe
Q 047073 218 VLNQPYYGAFLNSALHWYA-HSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGFLYLCDGFLEPN 295 (316)
Q Consensus 218 ~~~~~~~~v~~~G~lywl~-~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~ 295 (316)
... ......++.....+ ... ...|..+|+.+.+-.. .+ ..+.. .-..+... +|++.+... .+.+
T Consensus 242 ~v~--~~~~~~~~~~~~~~sg~~---d~~i~iwd~~~~~~~~-~l-~gH~~------~V~~l~~spdg~~l~S~s-~D~~ 307 (318)
T 4ggc_A 242 QVC--SILWSPHYKELISGHGFA---QNQLVIWKYPTMAKVA-EL-KGHTS------RVLSLTMSPDGATVASAA-ADET 307 (318)
T ss_dssp CEE--EEEEETTTTEEEEEECTT---TCCEEEEETTTCCEEE-EE-CCCSS------CEEEEEECTTSSCEEEEE-TTTE
T ss_pred eee--eeeecccccceEEEEEcC---CCEEEEEECCCCcEEE-EE-cCCCC------CEEEEEEcCCCCEEEEEe-cCCe
Confidence 000 00111223322332 222 3478889987654321 22 11111 22233333 566555444 4899
Q ss_pred EEEEEEeeC
Q 047073 296 LDIWIMKKY 304 (316)
Q Consensus 296 ~~vW~l~~~ 304 (316)
+.||-+.+.
T Consensus 308 v~iWd~~~~ 316 (318)
T 4ggc_A 308 LRLWRCFEL 316 (318)
T ss_dssp EEEECCSCC
T ss_pred EEEEECCCC
Confidence 999988653
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=55.73 E-value=90 Score=26.06 Aligned_cols=159 Identities=9% Similarity=0.062 Sum_probs=74.7
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCC-CCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPI-LGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~-T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
+.-+-+|-+++.+.. ...+.+++.. +++...+..... ........+.++|.. ++-++ .. .....+
T Consensus 146 ~~~spdg~l~v~~~~--~~~v~~~~~~~~g~~~~~~~~~~-~~g~~p~~~~~spdg-~~l~v-~~---------~~~~~v 211 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLG--SDKVYVYNVSDAGQLSEQSVLTM-EAGFGPRHLVFSPDG-QYAFL-AG---------ELSSQI 211 (347)
T ss_dssp EEECTTSCEEEEETT--TTEEEEEEECTTSCEEEEEEEEC-CTTCCEEEEEECTTS-SEEEE-EE---------TTTTEE
T ss_pred EEECCCCcEEEEeCC--CCEEEEEEECCCCcEEEeeeEEc-CCCCCCceEEECCCC-CEEEE-Ee---------CCCCEE
Confidence 333445555444422 6688889887 565543322111 111124457777643 33222 21 223556
Q ss_pred EEEEeC--CCceEecC---CCCceecc--CCcc--eeeCCeEEEEEecCCCCccEEEEEeCCCc-eeeEe-cCCCCcccc
Q 047073 200 EVHTIG--TNTWRNIG---DLPYVLNQ--PYYG--AFLNSALHWYAHSHDKRTAFMCSFDLGDE-QFRQF-PGPPTREYE 268 (316)
Q Consensus 200 ~vy~s~--t~~W~~~~---~~~~~~~~--~~~~--v~~~G~lywl~~~~~~~~~~i~~fD~~~~-~~~~i-~lPP~~~~~ 268 (316)
.+|+.. ++.++.+. ..+..... .... +.-+|...+++... ...|..||+... .+..+ .+ +....
T Consensus 212 ~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---~~~v~v~~~~~~g~~~~~~~~-~~~~~- 286 (347)
T 3hfq_A 212 ASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---YNTLAVFAVTADGHLTLIQQI-STEGD- 286 (347)
T ss_dssp EEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---TTEEEEEEECGGGCEEEEEEE-ECSSS-
T ss_pred EEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---CCEEEEEEECCCCcEEEeEEE-ecCCC-
Confidence 777655 46654432 12211000 0112 33367644444333 347888998633 44444 23 22111
Q ss_pred CCCCccceEEEEE-CCeEEEEEccCCCeEEEEEEee
Q 047073 269 KCRPINSISVGVS-GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 269 ~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
....++.. +|+..++....+..+.||.++.
T Consensus 287 -----~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 287 -----FPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp -----CCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred -----CcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 11233333 5664444433368999998853
No 68
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=55.62 E-value=85 Score=25.78 Aligned_cols=155 Identities=11% Similarity=0.150 Sum_probs=73.4
Q ss_pred ccCc-eEEeeeeccCCceEEEEcCCC-CceEecC--CCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 124 SCNG-LICLHEFSYKQDIISVCNPIL-GDHLVLP--QLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 124 s~~G-ll~~~~~~~~~~~~~v~NP~T-~~~~~lP--~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
+-+| .+++.... ...+.++|..+ ++...+. .... ........+.+++.. .+-++. . .....+
T Consensus 137 s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pdg-~~l~~~-~---------~~~~~i 202 (343)
T 1ri6_A 137 SPDNRTLWVPALK--QDRICLFTVSDDGHLVAQDPAEVTT-VEGAGPRHMVFHPNE-QYAYCV-N---------ELNSSV 202 (343)
T ss_dssp CTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEEEEEC-STTCCEEEEEECTTS-SEEEEE-E---------TTTTEE
T ss_pred CCCCCEEEEecCC--CCEEEEEEecCCCceeeeccccccc-CCCCCcceEEECCCC-CEEEEE-e---------CCCCEE
Confidence 3344 44444312 67899999887 6554222 1110 111124456776653 333222 1 224678
Q ss_pred EEEEeC--CCceEecC---CCCceeccC--Ccceee--CCeEEEEEecCCCCccEEEEEeCC--CceeeEe-cCCCCccc
Q 047073 200 EVHTIG--TNTWRNIG---DLPYVLNQP--YYGAFL--NSALHWYAHSHDKRTAFMCSFDLG--DEQFRQF-PGPPTREY 267 (316)
Q Consensus 200 ~vy~s~--t~~W~~~~---~~~~~~~~~--~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~--~~~~~~i-~lPP~~~~ 267 (316)
.+|+.. ++.++... ..+...... ...+.+ +|...+++... ...|..||+. +.....+ .+ +...
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---~~~i~v~d~~~~~~~~~~~~~~-~~~~- 277 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---ASLITVFSVSEDGSVLSKEGFQ-PTET- 277 (343)
T ss_dssp EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---TTEEEEEEECTTSCCEEEEEEE-ECSS-
T ss_pred EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC---CCEEEEEEEcCCCCceEEeeee-cCCC-
Confidence 888874 45553321 112110000 012333 46544444433 3478888887 4455554 22 2111
Q ss_pred cCCCCccceEEEE-ECCeEEEEEccCCCeEEEEEEee
Q 047073 268 EKCRPINSISVGV-SGGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 268 ~~~~~~~~~~L~~-~~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
....+.. -+|+..++....+..+.||.++.
T Consensus 278 ------~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 278 ------QPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp ------SCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred ------ccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 1112222 25665555543468899998853
No 69
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=54.05 E-value=86 Score=25.33 Aligned_cols=115 Identities=14% Similarity=0.095 Sum_probs=60.1
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
..+|.+.+.+ ......++++|+..+....+.... .....++.+++.. . ++... .....+.+|+
T Consensus 86 ~~~g~l~v~~-~~~~~~i~~~d~~g~~~~~~~~~~----~~~~~~i~~~~~g-~--l~v~~---------~~~~~i~~~~ 148 (286)
T 1q7f_A 86 RNSGDIIVTE-RSPTHQIQIYNQYGQFVRKFGATI----LQHPRGVTVDNKG-R--IIVVE---------CKVMRVIIFD 148 (286)
T ss_dssp TTTTEEEEEE-CGGGCEEEEECTTSCEEEEECTTT----CSCEEEEEECTTS-C--EEEEE---------TTTTEEEEEC
T ss_pred cCCCeEEEEc-CCCCCEEEEECCCCcEEEEecCcc----CCCceEEEEeCCC-C--EEEEE---------CCCCEEEEEc
Confidence 4577777665 211568999996554444443321 1225677777743 2 33322 2235677777
Q ss_pred eCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 204 IGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 204 s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
.....-+.+..... .....++.+ +|.+|..... ...|..||..++....+..
T Consensus 149 ~~g~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~ 202 (286)
T 1q7f_A 149 QNGNVLHKFGCSKH--LEFPNGVVVNDKQEIFISDNR----AHCVKVFNYEGQYLRQIGG 202 (286)
T ss_dssp TTSCEEEEEECTTT--CSSEEEEEECSSSEEEEEEGG----GTEEEEEETTCCEEEEESC
T ss_pred CCCCEEEEeCCCCc--cCCcEEEEECCCCCEEEEECC----CCEEEEEcCCCCEEEEEcc
Confidence 54433333211000 001123444 5787665443 4589999998876666644
No 70
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=53.86 E-value=45 Score=27.83 Aligned_cols=66 Identities=9% Similarity=-0.108 Sum_probs=37.1
Q ss_pred ccee-eCCeEEEEEecCCCCccEEEEEeCCCcee-eEecCCCCccccCCCCccceEEEEECCeEEEEEccCCCeEEEEE
Q 047073 224 YGAF-LNSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIWI 300 (316)
Q Consensus 224 ~~v~-~~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~vW~ 300 (316)
.++. .+|.||--.... + +..|..+|+++.+- ..+++|+.. ...-++..+++|+++.-. ++.+-++-
T Consensus 46 qGL~~~~~~LyestG~~-g-~S~v~~vD~~Tgkv~~~~~l~~~~--------FgeGit~~g~~ly~ltw~-~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLN-G-RSSIRKVDIESGKTLQQIELGKRY--------FGEGISDWKDKIVGLTWK-NGLGFVWN 113 (262)
T ss_dssp EEEEEETTEEEEEEEET-T-EEEEEEECTTTCCEEEEEECCTTC--------CEEEEEEETTEEEEEESS-SSEEEEEE
T ss_pred ceEEEECCEEEEECCCC-C-CceEEEEECCCCcEEEEEecCCcc--------ceeEEEEeCCEEEEEEee-CCEEEEEE
Confidence 3433 356665544431 1 45899999998754 666884432 223355567777777653 44444433
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=53.46 E-value=1.1e+02 Score=26.57 Aligned_cols=93 Identities=10% Similarity=0.044 Sum_probs=46.9
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceE----ecC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWR----NIG 213 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~----~~~ 213 (316)
++.+.|||..+++....-.. .......+.+++ . .++. . .....+.+|+..++.-. ...
T Consensus 192 dg~i~vwd~~~~~~~~~~~~----h~~~v~~l~~~~---~-~l~s-~---------s~dg~i~vwd~~~~~~~~~~~~~~ 253 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTLIH----HCEAVLHLRFNN---G-MMVT-C---------SKDRSIAVWDMASPTDITLRRVLV 253 (435)
T ss_dssp TSCEEEEESSSCCEEEEECC----CCSCEEEEECCT---T-EEEE-E---------ETTSCEEEEECSSSSCCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEcC----CCCcEEEEEEcC---C-EEEE-e---------eCCCcEEEEeCCCCCCceeeeEec
Confidence 78899999998875432111 112244555543 2 2222 2 12356778887765321 111
Q ss_pred CCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCcee
Q 047073 214 DLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF 256 (316)
Q Consensus 214 ~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~ 256 (316)
... ..-.++..+|.....+.. ...|..+|+.+...
T Consensus 254 ~~~----~~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 254 GHR----AAVNVVDFDDKYIVSASG----DRTIKVWNTSTCEF 288 (435)
T ss_dssp CCS----SCEEEEEEETTEEEEEET----TSEEEEEETTTCCE
T ss_pred CCC----CcEEEEEeCCCEEEEEeC----CCeEEEEECCcCcE
Confidence 100 111134446665554444 35788888877643
No 72
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=52.87 E-value=1e+02 Score=25.82 Aligned_cols=153 Identities=11% Similarity=0.075 Sum_probs=77.2
Q ss_pred eeeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCC-CCCeEEEEEEEeecccccCCCCCe
Q 047073 120 SLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHC-TNQYKVIQILSYKDQAAISSSKPQ 198 (316)
Q Consensus 120 ~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~-~~~~kvv~~~~~~~~~~~~~~~~~ 198 (316)
.+.++.+|.+.+.+ . ...+.++|..+++...--.. ........+.+++. .+.+- +.. .....
T Consensus 88 ~~s~s~D~~i~~w~-~--~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l-~s~----------s~dg~ 150 (343)
T 3lrv_A 88 IISRGPCNRLLLLY-P--GNQITILDSKTNKVLREIEV---DSANEIIYMYGHNEVNTEYF-IWA----------DNRGT 150 (343)
T ss_dssp EEEECSTTEEEEEE-T--TTEEEEEETTTCCEEEEEEC---CCSSCEEEEECCC---CCEE-EEE----------ETTCC
T ss_pred eEEecCCCeEEEEE-c--cCceEEeecCCcceeEEeec---CCCCCEEEEEcCCCCCCCEE-EEE----------eCCCc
Confidence 34456677777776 4 66788888888873321111 11123566776663 23332 222 12456
Q ss_pred EEEEEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCC-ccccCCCCccc
Q 047073 199 VEVHTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPT-REYEKCRPINS 275 (316)
Q Consensus 199 ~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~-~~~~~~~~~~~ 275 (316)
+.+|+..++.-......... ....++.+ +|.+...+.. ...|..+|+.+.......+ .. +.. .-
T Consensus 151 i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~----dg~i~iwd~~~~~~~~~~~-~~~h~~------~v 217 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSP----DGILDVYNLSSPDQASSRF-PVDEEA------KI 217 (343)
T ss_dssp EEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECT----TSCEEEEESSCTTSCCEEC-CCCTTS------CE
T ss_pred EEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcC----CCEEEEEECCCCCCCccEE-eccCCC------CE
Confidence 88888887754222111100 00112222 5665555444 4589999998875432223 11 111 22
Q ss_pred eEEEEE-CCeEEEEEccCCCeEEEEEEeeC
Q 047073 276 ISVGVS-GGFLYLCDGFLEPNLDIWIMKKY 304 (316)
Q Consensus 276 ~~L~~~-~G~L~lv~~~~~~~~~vW~l~~~ 304 (316)
..+... +|...+...+ + .+.||-+...
T Consensus 218 ~~l~fs~~g~~l~s~~~-~-~v~iwd~~~~ 245 (343)
T 3lrv_A 218 KEVKFADNGYWMVVECD-Q-TVVCFDLRKD 245 (343)
T ss_dssp EEEEECTTSSEEEEEES-S-BEEEEETTSS
T ss_pred EEEEEeCCCCEEEEEeC-C-eEEEEEcCCC
Confidence 233333 5555555553 4 9999987653
No 73
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=52.60 E-value=24 Score=25.35 Aligned_cols=44 Identities=14% Similarity=0.033 Sum_probs=31.0
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEE
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQIL 184 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~ 184 (316)
.-+++++||.|+.|. |.... ....+.+.+..|...+.|.|+...
T Consensus 10 ~A~V~~~d~~~~~W~--p~~~g-~~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 10 RATVMLYDDGNKRWL--PAGTG-PQAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EEECBEECTTTSSCC--BSSCS-CCCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCcee--ECCCC-CCCccEEEEEEeCCCCEEEEEEEE
Confidence 458899999999985 43321 112225778888888899998765
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=51.97 E-value=1.1e+02 Score=25.92 Aligned_cols=138 Identities=9% Similarity=0.062 Sum_probs=71.2
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.|||..+++....-... .....+..+.+.+..+.+ +... .....+.+++..+.....+.....
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~--l~s~---------~~d~~i~iwd~~~~~~~~~~~~~~ 161 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQ--LFVS---------SIRGATTLRDFSGSVIQVFAKTDS 161 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEE--EEEE---------ETTTEEEEEETTSCEEEEEECCCC
T ss_pred CCeEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCE--EEEE---------eCCCEEEEEECCCCceEEEeccCC
Confidence 778999999988766543321 122336677776632222 2222 124568888887665544432110
Q ss_pred eeccCCcc--eeeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCe-EEEEEccCC
Q 047073 218 VLNQPYYG--AFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGF-LYLCDGFLE 293 (316)
Q Consensus 218 ~~~~~~~~--v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~-L~lv~~~~~ 293 (316)
. ...-.+ ..-+|.+...+.. ...|..+|+..+....+..... .-..+... +|+ +.+.... +
T Consensus 162 ~-~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~~-d 226 (383)
T 3ei3_B 162 W-DYWYCCVDVSVSRQMLATGDS----TGRLLLLGLDGHEIFKEKLHKA---------KVTHAEFNPRCDWLMATSSV-D 226 (383)
T ss_dssp S-SCCEEEEEEETTTTEEEEEET----TSEEEEEETTSCEEEEEECSSS---------CEEEEEECSSCTTEEEEEET-T
T ss_pred C-CCCeEEEEECCCCCEEEEECC----CCCEEEEECCCCEEEEeccCCC---------cEEEEEECCCCCCEEEEEeC-C
Confidence 0 000001 1224554444444 4589999997665554433111 11222222 344 5555543 7
Q ss_pred CeEEEEEEee
Q 047073 294 PNLDIWIMKK 303 (316)
Q Consensus 294 ~~~~vW~l~~ 303 (316)
..+.+|-+..
T Consensus 227 ~~i~iwd~~~ 236 (383)
T 3ei3_B 227 ATVKLWDLRN 236 (383)
T ss_dssp SEEEEEEGGG
T ss_pred CEEEEEeCCC
Confidence 8888888765
No 75
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=51.69 E-value=1.1e+02 Score=28.01 Aligned_cols=110 Identities=9% Similarity=-0.008 Sum_probs=58.3
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
+++++... . .+...++|..|++...+...+. ..+.++|. +++-+.... ..+ ....+.+++..
T Consensus 122 ~~~~~~s~-~--~~~~~l~d~~~g~~~~l~~~~~-------~~~~~spD-G~~la~~~~--~~~-----~~~~i~~~d~~ 183 (582)
T 3o4h_A 122 EAVVFTGA-T--EDRVALYALDGGGLRELARLPG-------FGFVSDIR-GDLIAGLGF--FGG-----GRVSLFTSNLS 183 (582)
T ss_dssp SCEEEEEE-C--SSCEEEEEEETTEEEEEEEESS-------CEEEEEEE-TTEEEEEEE--EET-----TEEEEEEEETT
T ss_pred CeEEEEec-C--CCCceEEEccCCcEEEeecCCC-------ceEEECCC-CCEEEEEEE--cCC-----CCeEEEEEcCC
Confidence 34555544 3 4455689999998777654321 23344443 233222221 111 12457778888
Q ss_pred CCceEecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceee
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFR 257 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~ 257 (316)
++.++.+........ .....=||...+.+... + ...|..+|+++....
T Consensus 184 ~g~~~~l~~~~~~~~--~~~~SpDG~~l~~~~~~-~-~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 184 SGGLRVFDSGEGSFS--SASISPGMKVTAGLETA-R-EARLVTVDPRDGSVE 231 (582)
T ss_dssp TCCCEEECCSSCEEE--EEEECTTSCEEEEEECS-S-CEEEEEECTTTCCEE
T ss_pred CCCceEeecCCCccc--cceECCCCCEEEEccCC-C-eeEEEEEcCCCCcEE
Confidence 888887653322111 00122267655533321 1 347999999988776
No 76
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=51.50 E-value=1.3e+02 Score=26.50 Aligned_cols=152 Identities=10% Similarity=-0.045 Sum_probs=75.7
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
+.-..+|-|.+.+.. ...+.++|+.+++...+..... . .. +.+++..+ .++.... .....+.
T Consensus 136 la~d~~g~lyv~d~~--~~~I~~id~~~g~~~~~~~~~~--~---~~-ia~~~~g~--~l~~~d~--------~~~~~I~ 197 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRD--DPRVRLISVDDNKVTTVHPGFK--G---GK-PAVTKDKQ--RVYSIGW--------EGTHTVY 197 (409)
T ss_dssp EEECSTTEEEEEETT--TTEEEEEETTTTEEEEEEETCC--B---CB-CEECTTSS--EEEEEBS--------STTCEEE
T ss_pred EEEeCCCCEEEEecC--CCcEEEEECCCCEEEEeeccCC--C---Cc-eeEecCCC--cEEEEec--------CCCceEE
Confidence 333457777777633 6789999999988776543311 1 11 55555433 2222211 0112666
Q ss_pred EEEeCCCc-eEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccce
Q 047073 201 VHTIGTNT-WRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSI 276 (316)
Q Consensus 201 vy~s~t~~-W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~ 276 (316)
+++..++. .+.+............++.+ +|.||+ +.. ...|..||+++.....+...+....... ...
T Consensus 198 ~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~----~~~I~~~d~~~~~~~~~~~~~~~g~~~~---~P~ 269 (409)
T 3hrp_A 198 VYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDS----NKNFGRFNVKTQEVTLIKQLELSGSLGT---NPG 269 (409)
T ss_dssp EEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECT----TCEEEEEETTTCCEEEEEECCCCSCCCC---SSC
T ss_pred EEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EEC----CCcEEEEECCCCCEEEEecccccCCCCC---Ccc
Confidence 77765442 23331111100111123333 688999 333 3489999999877665511011111110 212
Q ss_pred -EEEEE--CCeEEEEEccCCCeEEEE
Q 047073 277 -SVGVS--GGFLYLCDGFLEPNLDIW 299 (316)
Q Consensus 277 -~L~~~--~G~L~lv~~~~~~~~~vW 299 (316)
.++.. +|.|++.... ...+.+|
T Consensus 270 ~~ia~~p~~g~lyv~d~~-~~~I~~~ 294 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQN-LSSVYKI 294 (409)
T ss_dssp CEEEEETTTTEEEEEETT-TTEEEEE
T ss_pred ccEEEeCCCCEEEEEeCC-CCEEEEE
Confidence 45555 4778777654 4444333
No 77
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=51.09 E-value=1.3e+02 Score=26.37 Aligned_cols=143 Identities=10% Similarity=0.056 Sum_probs=67.6
Q ss_pred ceEEEE--cCCCCceEecCCC--CCCCccCceEEEEE--eCCCCCeEEEEEEEeecccccCCCCCeEEEEEe---CCCce
Q 047073 139 DIISVC--NPILGDHLVLPQL--KRKNVATRIRGFGY--NHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI---GTNTW 209 (316)
Q Consensus 139 ~~~~v~--NP~T~~~~~lP~~--~~~~~~~~~~~~~~--d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s---~t~~W 209 (316)
.++.|+ ||.++++..+..+ |........+++.+ ++.++.+.++.... ...++.|.. +.+..
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k----------~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK----------EGEFEQYELKADKNGYI 168 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS----------SSEEEEEEEEECTTSCE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC----------CCeEEEEEEEeCCCCcc
Confidence 455555 9999998888543 21001122445555 77677755555432 235555544 55544
Q ss_pred Ee--cCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCc---eeeEe---cCCCCccccCCCCccceEEE
Q 047073 210 RN--IGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDE---QFRQF---PGPPTREYEKCRPINSISVG 279 (316)
Q Consensus 210 ~~--~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~---~~~~i---~lPP~~~~~~~~~~~~~~L~ 279 (316)
.. +..++... ....+|+- .|.||.-... ..|..||.+-+ +-+.+ .. +....+. ....|.
T Consensus 169 ~~~lVR~f~lgs-q~EgcvvDd~~g~Lyv~eEd-----~GIw~~da~p~~~~~~~~v~~~~~-g~l~aDv----EGLai~ 237 (355)
T 3amr_A 169 SGKKVRAFKMNS-QTEGMAADDEYGRLYIAEED-----EAIWKFSAEPDGGSNGTVIDRADG-RHLTRDI----EGLTIY 237 (355)
T ss_dssp EEEEEEEEECSS-CEEEEEEETTTTEEEEEETT-----TEEEEEECSTTSCSCCEEEEEBSS-SSBCSCE----EEEEEE
T ss_pred cceEEEEecCCC-CcceEEEcCCCCeEEEeccc-----ceEEEEeCCcCCCCCceEEEEecC-CccccCc----ceEEEE
Confidence 22 11111110 11113432 4777765443 37999995522 12333 33 2222111 233332
Q ss_pred EE-CCe-EEEEEccCCCeEEEEEEe
Q 047073 280 VS-GGF-LYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 280 ~~-~G~-L~lv~~~~~~~~~vW~l~ 302 (316)
.. +|+ ..++....++++.|+-++
T Consensus 238 ~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 238 YAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecCCCCEEEEEEcCCCCEEEEEECC
Confidence 12 333 333333336889988775
No 78
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=50.84 E-value=1.2e+02 Score=26.27 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=67.0
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
.+|.|.+.+.. ...+.++++-.+....+... ......++.+|+..+. ++.... .....++.++.
T Consensus 169 ~~g~lY~~d~~--~~~I~~~~~dg~~~~~l~~~----~l~~P~giavdp~~g~--ly~td~--------~~~~~I~r~~~ 232 (386)
T 3v65_B 169 VHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQ----SLEKPRAIALHPMEGT--IYWTDW--------GNTPRIEASSM 232 (386)
T ss_dssp TTTEEEEEETT--TTEEEECBTTSCSCEEEECS----SCSCEEEEEEETTTTE--EEEEEC--------SSSCEEEEEET
T ss_pred CCCeEEEEcCC--CCeEEEEeCCCCceEEeecC----CCCCCcEEEEEcCCCe--EEEecc--------CCCCEEEEEeC
Confidence 34555454422 44666666655443333211 1122567888876542 222221 11256666665
Q ss_pred CCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEE
Q 047073 205 GTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGV 280 (316)
Q Consensus 205 ~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~ 280 (316)
....-+.+.... .....++.+ +|.|||.... ...|.+||++...-..+ .. . . . ....++.
T Consensus 233 dG~~~~~~~~~~---~~~PnGlavd~~~~~lY~aD~~----~~~I~~~d~dG~~~~~~~~~-~--~--~----~P~giav 296 (386)
T 3v65_B 233 DGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVDAK----HHVIERANLDGSHRKAVISQ-G--L--P----HPFAITV 296 (386)
T ss_dssp TSCSCEEEECSS---CSCEEEEEEEGGGTEEEEEETT----TTEEEEECTTSCSCEEEECS-S--C--S----SEEEEEE
T ss_pred CCCCcEEEEECC---CCCeeeEEEeCCCCEEEEEECC----CCEEEEEeCCCCeeEEEEEC-C--C--C----CceEEEE
Confidence 443222221100 011124444 6899999766 46899999986543333 22 1 1 0 2334556
Q ss_pred ECCeEEEEEcc
Q 047073 281 SGGFLYLCDGF 291 (316)
Q Consensus 281 ~~G~L~lv~~~ 291 (316)
.+|.|++....
T Consensus 297 ~~~~ly~td~~ 307 (386)
T 3v65_B 297 FEDSLYWTDWH 307 (386)
T ss_dssp ETTEEEEEETT
T ss_pred ECCEEEEeeCC
Confidence 77888877654
No 79
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=50.77 E-value=1.1e+02 Score=25.65 Aligned_cols=113 Identities=9% Similarity=0.018 Sum_probs=60.3
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
.+++.+|.|...+ ......++++++-......+-... .....++.+|+..+. ++... .....++
T Consensus 126 avdp~~g~ly~~d-~~~~~~I~~~~~dG~~~~~~~~~~----~~~P~gla~d~~~~~--lY~~D---------~~~~~I~ 189 (316)
T 1ijq_A 126 VVDPVHGFMYWTD-WGTPAKIKKGGLNGVDIYSLVTEN----IQWPNGITLDLLSGR--LYWVD---------SKLHSIS 189 (316)
T ss_dssp EEETTTTEEEEEE-CSSSCEEEEEETTSCCEEEEECSS----CSCEEEEEEETTTTE--EEEEE---------TTTTEEE
T ss_pred EeCCCCCEEEEEc-cCCCCeEEEEcCCCCCeEEEEECC----CCCceEEEEeccCCE--EEEEE---------CCCCeEE
Confidence 3455678887776 211368888888655444332111 122568888876443 33322 2345677
Q ss_pred EEEeCCCceEecCCCCceeccCCcc-eeeCCeEEEEEecCCCCccEEEEEeCCCc
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYG-AFLNSALHWYAHSHDKRTAFMCSFDLGDE 254 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~-v~~~G~lywl~~~~~~~~~~i~~fD~~~~ 254 (316)
+|+.....-+.+...... .....+ ...+|.+||.... ...|.++|..+.
T Consensus 190 ~~d~dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~----~~~V~~~~~~~g 239 (316)
T 1ijq_A 190 SIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDII----NEAIFSANRLTG 239 (316)
T ss_dssp EEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETT----TTEEEEEETTTC
T ss_pred EEecCCCceEEEeecCCc-cCCcEEEEEECCEEEEEECC----CCeEEEEeCCCC
Confidence 777654322222110000 000012 2247899998866 468999998544
No 80
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=50.52 E-value=1.2e+02 Score=25.77 Aligned_cols=113 Identities=7% Similarity=0.012 Sum_probs=60.4
Q ss_pred eeeccCc-eEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 121 LLSSCNG-LICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 121 ~~~s~~G-ll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
+.-+.+| .|++.... .+.+.+||+.+++....-... .....+.+++.. ++-++. . .....+
T Consensus 37 ~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~~~-----~~v~~~~~spdg-~~l~~~-~---------~~~~~v 98 (391)
T 1l0q_A 37 AVISPDGTKVYVANAH--SNDVSIIDTATNNVIATVPAG-----SSPQGVAVSPDG-KQVYVT-N---------MASSTL 98 (391)
T ss_dssp EEECTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTS-SEEEEE-E---------TTTTEE
T ss_pred EEECCCCCEEEEECCC--CCeEEEEECCCCeEEEEEECC-----CCccceEECCCC-CEEEEE-E---------CCCCEE
Confidence 3344455 34444323 679999999998865432211 135567776643 332222 1 224678
Q ss_pred EEEEeCCCceEecCCCCceeccCCccee--eCCeEEEEEecCCCCccEEEEEeCCCceeeE
Q 047073 200 EVHTIGTNTWRNIGDLPYVLNQPYYGAF--LNSALHWYAHSHDKRTAFMCSFDLGDEQFRQ 258 (316)
Q Consensus 200 ~vy~s~t~~W~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~ 258 (316)
.+|+..++.-...-..... ..++. -+|...+++... ...|..+|+.+.+...
T Consensus 99 ~v~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGKS----PLGLALSPDGKKLYVTNNG---DKTVSVINTVTKAVIN 152 (391)
T ss_dssp EEEETTTTEEEEEEECSSS----EEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEE
T ss_pred EEEECCCCeEEEEEeCCCC----cceEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEE
Confidence 9999888754322111100 11222 256644444443 4589999998876543
No 81
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=50.00 E-value=1.1e+02 Score=25.23 Aligned_cols=145 Identities=12% Similarity=0.034 Sum_probs=73.0
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
..+.+++.... ...+.++|+.|++....-.... ... .+.+++..+ + ++... .....+.+|+.
T Consensus 8 ~~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~----~~~-~~~~s~dg~-~-l~~~~---------~~~~~i~~~d~ 69 (331)
T 3u4y_A 8 TSNFGIVVEQH--LRRISFFSTDTLEILNQITLGY----DFV-DTAITSDCS-N-VVVTS---------DFCQTLVQIET 69 (331)
T ss_dssp CCCEEEEEEGG--GTEEEEEETTTCCEEEEEECCC----CEE-EEEECSSSC-E-EEEEE---------STTCEEEEEEC
T ss_pred CCCEEEEEecC--CCeEEEEeCcccceeeeEEccC----Ccc-eEEEcCCCC-E-EEEEe---------CCCCeEEEEEC
Confidence 34555555433 6799999999998754322211 113 666766533 3 22222 22357888888
Q ss_pred CCCce--EecCCCCceeccCCc--ceeeCCeEEEEEecCCCCccEEEEEeCCCceee-EecCCCCccccCCCCccceEEE
Q 047073 205 GTNTW--RNIGDLPYVLNQPYY--GAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFR-QFPGPPTREYEKCRPINSISVG 279 (316)
Q Consensus 205 ~t~~W--~~~~~~~~~~~~~~~--~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~-~i~lPP~~~~~~~~~~~~~~L~ 279 (316)
.++.- +.+.... .... .+.-+|...+..... +....|..+|+.+.... .++. .. ....+.
T Consensus 70 ~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~-~~~~~i~v~d~~~~~~~~~~~~-~~---------~~~~~~ 134 (331)
T 3u4y_A 70 QLEPPKVVAIQEGQ----SSMADVDITPDDQFAVTVTGL-NHPFNMQSYSFLKNKFISTIPI-PY---------DAVGIA 134 (331)
T ss_dssp SSSSCEEEEEEECS----SCCCCEEECTTSSEEEECCCS-SSSCEEEEEETTTTEEEEEEEC-CT---------TEEEEE
T ss_pred CCCceeEEecccCC----CCccceEECCCCCEEEEecCC-CCcccEEEEECCCCCeEEEEEC-CC---------CccceE
Confidence 87753 1121100 0111 122356533333331 11228999999877553 3333 11 111233
Q ss_pred EE-CCe-EEEEEccCCCe-EEEEEEee
Q 047073 280 VS-GGF-LYLCDGFLEPN-LDIWIMKK 303 (316)
Q Consensus 280 ~~-~G~-L~lv~~~~~~~-~~vW~l~~ 303 (316)
.. +|+ |++.... +.. +.+|.++.
T Consensus 135 ~spdg~~l~~~~~~-~~~~i~~~~~~~ 160 (331)
T 3u4y_A 135 ISPNGNGLILIDRS-SANTVRRFKIDA 160 (331)
T ss_dssp ECTTSSCEEEEEET-TTTEEEEEEECT
T ss_pred ECCCCCEEEEEecC-CCceEEEEEECC
Confidence 32 555 5555554 455 88888764
No 82
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=49.08 E-value=1.3e+02 Score=25.81 Aligned_cols=139 Identities=13% Similarity=0.087 Sum_probs=75.2
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
.++..+|.|.+.+.. ...+.++++-.+....+.... .....++.+|+..+ .++.... .....++
T Consensus 122 avd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~----l~~P~~iavdp~~g--~ly~td~--------~~~~~I~ 185 (349)
T 3v64_C 122 AVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQS----LEKPRAIALHPMEG--TIYWTDW--------GNTPRIE 185 (349)
T ss_dssp EEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECTT----CSCEEEEEEETTTT--EEEEEEC--------SSSCEEE
T ss_pred EEecCCCeEEEEcCC--CCeEEEEcCCCCceEEEEeCC----CCCcceEEEecCcC--eEEEecc--------CCCCEEE
Confidence 344457777777633 568888888766544433211 12256888887654 2222221 1125677
Q ss_pred EEEeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeE-ecCCCCccccCCCCccce
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQ-FPGPPTREYEKCRPINSI 276 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~-i~lPP~~~~~~~~~~~~~ 276 (316)
.++.....-+.+.... ....+++.+ +|.|||.... ...|.++|++...-.. +.. . .. ...
T Consensus 186 r~~~dG~~~~~~~~~~---~~~PnGla~d~~~~~lY~aD~~----~~~I~~~~~dG~~~~~~~~~-~--~~------~P~ 249 (349)
T 3v64_C 186 ASSMDGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVDAK----HHVIERANLDGSHRKAVISQ-G--LP------HPF 249 (349)
T ss_dssp EEETTSCSCEESCCSS---CSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEECS-S--CS------SEE
T ss_pred EEeCCCCCcEEEEECC---CCCcceEEEeCCCCEEEEEECC----CCEEEEEeCCCCceEEEEeC-C--CC------Cce
Confidence 7765543333332110 111124444 6899998766 4689999998654333 232 1 10 223
Q ss_pred EEEEECCeEEEEEcc
Q 047073 277 SVGVSGGFLYLCDGF 291 (316)
Q Consensus 277 ~L~~~~G~L~lv~~~ 291 (316)
.++..+|.|++....
T Consensus 250 giav~~~~ly~td~~ 264 (349)
T 3v64_C 250 AITVFEDSLYWTDWH 264 (349)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEEECCEEEEecCC
Confidence 455577888877654
No 83
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=48.83 E-value=1.2e+02 Score=25.65 Aligned_cols=113 Identities=5% Similarity=-0.092 Sum_probs=55.3
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
+.-+.+|-.++.... .+.+.|||..+++....-.. ....+..+.+.+....+ ++... ....+.
T Consensus 145 v~~spdg~~l~sgs~--dg~v~iwd~~~~~~~~~~~~----h~~~v~~v~~s~~~~~~-~~s~~----------~dg~v~ 207 (357)
T 4g56_B 145 LSVFSDGTQAVSGGK--DFSVKVWDLSQKAVLKSYNA----HSSEVNCVAACPGKDTI-FLSCG----------EDGRIL 207 (357)
T ss_dssp EEECSSSSEEEEEET--TSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTCSSC-EEEEE----------TTSCEE
T ss_pred EEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEEcC----CCCCEEEEEEccCCCce-eeeec----------cCCceE
Confidence 334456665555424 77899999999876542211 12225566665543332 22221 134577
Q ss_pred EEEeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCce
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQ 255 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~ 255 (316)
+|+.+++.-......... .....++.+ ++.+...+.. ...|..+|+.+..
T Consensus 208 ~wd~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~la~g~~----d~~i~~wd~~~~~ 260 (357)
T 4g56_B 208 LWDTRKPKPATRIDFCAS-DTIPTSVTWHPEKDDTFACGDE----TGNVSLVNIKNPD 260 (357)
T ss_dssp ECCTTSSSCBCBCCCTTC-CSCEEEEEECTTSTTEEEEEES----SSCEEEEESSCGG
T ss_pred EEECCCCceeeeeeeccc-cccccchhhhhcccceEEEeec----ccceeEEECCCCc
Confidence 887776643221110000 000112332 2344433333 3478889988764
No 84
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=48.20 E-value=1e+02 Score=24.43 Aligned_cols=154 Identities=9% Similarity=-0.047 Sum_probs=73.3
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCC-CceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPIL-GDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQV 199 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T-~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~ 199 (316)
+.-+-+|-.++.. . ...++++|..+ ++...+..... ......+.+.+.. .+- +.. .... .....+
T Consensus 47 ~~~spdg~~l~~~-~--~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~spdg-~~l-~~~-~~~~-----~~~~~l 112 (297)
T 2ojh_A 47 PNWSPDGKYLLLN-S--EGLLYRLSLAGDPSPEKVDTGFA---TICNNDHGISPDG-ALY-AIS-DKVE-----FGKSAI 112 (297)
T ss_dssp EEECTTSSEEEEE-E--TTEEEEEESSSCCSCEECCCTTC---CCBCSCCEECTTS-SEE-EEE-ECTT-----TSSCEE
T ss_pred eEECCCCCEEEEE-c--CCeEEEEeCCCCCCceEeccccc---cccccceEECCCC-CEE-EEE-EeCC-----CCcceE
Confidence 3344455544444 3 67999999999 88776654321 1112234444432 222 222 2111 124667
Q ss_pred EEEEeCCCceEecCCCCceeccCCcceeeCCe-EEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEE
Q 047073 200 EVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSA-LHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISV 278 (316)
Q Consensus 200 ~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L 278 (316)
.+++..++.-+.+........ -...-+|. +++..... + ...|..+|+.+.....+...+. ....+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~~-~-~~~l~~~~~~~~~~~~~~~~~~---------~~~~~ 178 (297)
T 2ojh_A 113 YLLPSTGGTPRLMTKNLPSYW---HGWSPDGKSFTYCGIRD-Q-VFDIYSMDIDSGVETRLTHGEG---------RNDGP 178 (297)
T ss_dssp EEEETTCCCCEECCSSSSEEE---EEECTTSSEEEEEEEET-T-EEEEEEEETTTCCEEECCCSSS---------CEEEE
T ss_pred EEEECCCCceEEeecCCCccc---eEECCCCCEEEEEECCC-C-ceEEEEEECCCCcceEcccCCC---------ccccc
Confidence 777777666555443221100 01112454 44333331 1 3456777777666554422111 11122
Q ss_pred EE-ECCeEEEEEccCCCeEEEEEEe
Q 047073 279 GV-SGGFLYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 279 ~~-~~G~L~lv~~~~~~~~~vW~l~ 302 (316)
.. -+|+..++....+..+.||.++
T Consensus 179 ~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 179 DYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eECCCCCEEEEEecCCCCccEEEEC
Confidence 22 2566444443336778888886
No 85
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=47.33 E-value=1.3e+02 Score=25.50 Aligned_cols=126 Identities=13% Similarity=0.106 Sum_probs=66.7
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
+|.+++.. . ...++.+|+.|++...--+... ...+..+ +. .|+... ....+..|+..
T Consensus 239 ~~~v~~~~-~--~g~l~~~d~~tG~~~w~~~~~~------~~~~~~~---~~-~l~~~~----------~~g~l~~~d~~ 295 (376)
T 3q7m_A 239 NGVVFALA-Y--NGNLTALDLRSGQIMWKRELGS------VNDFIVD---GN-RIYLVD----------QNDRVMALTID 295 (376)
T ss_dssp TTEEEEEC-T--TSCEEEEETTTCCEEEEECCCC------EEEEEEE---TT-EEEEEE----------TTCCEEEEETT
T ss_pred CCEEEEEe-c--CcEEEEEECCCCcEEeeccCCC------CCCceEE---CC-EEEEEc----------CCCeEEEEECC
Confidence 56666654 3 6789999999987442111111 1222222 11 222211 13457788887
Q ss_pred CC--ceEecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceee-EecCCCCccccCCCCccceEEEEEC
Q 047073 206 TN--TWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFR-QFPGPPTREYEKCRPINSISVGVSG 282 (316)
Q Consensus 206 t~--~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~-~i~lPP~~~~~~~~~~~~~~L~~~~ 282 (316)
++ .|+.-.. .. .....++..+|.+|..... ..|.+||..+.+.. ..+++.... .......+
T Consensus 296 tG~~~w~~~~~-~~--~~~~~~~~~~~~l~v~~~~-----g~l~~~d~~tG~~~~~~~~~~~~~--------~~~~~~~~ 359 (376)
T 3q7m_A 296 GGVTLWTQSDL-LH--RLLTSPVLYNGNLVVGDSE-----GYLHWINVEDGRFVAQQKVDSSGF--------QTEPVAAD 359 (376)
T ss_dssp TCCEEEEECTT-TT--SCCCCCEEETTEEEEECTT-----SEEEEEETTTCCEEEEEECCTTCB--------CSCCEEET
T ss_pred CCcEEEeeccc-CC--CcccCCEEECCEEEEEeCC-----CeEEEEECCCCcEEEEEecCCCcc--------eeCCEEEC
Confidence 77 4765421 11 1123356778888876544 38999999877543 234422111 11223457
Q ss_pred CeEEEEEc
Q 047073 283 GFLYLCDG 290 (316)
Q Consensus 283 G~L~lv~~ 290 (316)
|.|++...
T Consensus 360 ~~l~v~~~ 367 (376)
T 3q7m_A 360 GKLLIQAK 367 (376)
T ss_dssp TEEEEEBT
T ss_pred CEEEEEeC
Confidence 77766554
No 86
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=46.81 E-value=1.3e+02 Score=25.45 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=32.8
Q ss_pred CCeEEEEEeCCC--ceEecCCCCcee-------ccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCce
Q 047073 196 KPQVEVHTIGTN--TWRNIGDLPYVL-------NQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQ 255 (316)
Q Consensus 196 ~~~~~vy~s~t~--~W~~~~~~~~~~-------~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~ 255 (316)
...+..|+..+| .|+.-...+... .....++..+|.+|..... ..+.++|+.+.+
T Consensus 197 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~-----g~l~~~d~~tG~ 260 (376)
T 3q7m_A 197 NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN-----GNLTALDLRSGQ 260 (376)
T ss_dssp TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTT-----SCEEEEETTTCC
T ss_pred CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC-----cEEEEEECCCCc
Confidence 346777887776 576543222110 0223467778888876544 379999997653
No 87
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=46.70 E-value=39 Score=24.13 Aligned_cols=43 Identities=7% Similarity=-0.040 Sum_probs=30.4
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEE
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQIL 184 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~ 184 (316)
...++++||.|+.|...-.. .....+.+..|...+.|+|+...
T Consensus 10 ~A~V~~~d~~~~~W~p~~~~----~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 10 RAAVMVYDDANKKWVPAGGS----TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEEETTTTEEEEGGGC----CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCceEECCCC----CCceEEEEEEECCCCEEEEEEEE
Confidence 56899999999988643311 11234778888888889998764
No 88
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=46.61 E-value=11 Score=22.19 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=15.2
Q ss_pred CCCCCCHHHHHHHHhcCCcc
Q 047073 38 SMEDLPLPILVDVFSRLPIK 57 (316)
Q Consensus 38 ~~~~LP~dll~~IL~rLP~~ 57 (316)
-+..||.||.+|||+--...
T Consensus 20 VF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 20 VFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp GTTTSCHHHHHHHTTCCCSC
T ss_pred HHHHCcHHHHHHHHhcchHH
Confidence 35679999999998865543
No 89
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=46.40 E-value=1.5e+02 Score=25.80 Aligned_cols=105 Identities=10% Similarity=0.069 Sum_probs=60.3
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
.+.|++.. ...+..+++.+++...+-.. .....++.+|+..+. |+... .....+..++..
T Consensus 87 ~~~l~~~~----~~~I~~i~~~~~~~~~~~~~-----~~~~~gl~~d~~~~~--ly~~D---------~~~~~I~r~~~~ 146 (386)
T 3v65_B 87 EPVLLFAN----RIDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRREL--VFWSD---------VTLDRILRANLN 146 (386)
T ss_dssp CCEEEEEC----BSCEEEECTTSCCCEEEECS-----CSCEEEEEEETTTTE--EEEEE---------TTTTEEEEEETT
T ss_pred cceeEeec----CccceeeccCCCcEEEEecC-----CCccEEEEEecCCCe--EEEEe---------CCCCcEEEEecC
Confidence 56666666 56788888877665443221 112678888876543 33322 224566777766
Q ss_pred CCceEecCCCCceeccCCccee---eCCeEEEEEecCCCCccEEEEEeCCCceee
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAF---LNSALHWYAHSHDKRTAFMCSFDLGDEQFR 257 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~i~~fD~~~~~~~ 257 (316)
++..+.+..... ....++. .+|.|||.... ...|.++|+++..-.
T Consensus 147 g~~~~~~~~~~~---~~p~glavd~~~g~lY~~d~~----~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 147 GSNVEEVVSTGL---ESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAHRK 194 (386)
T ss_dssp SCCEEEEECSSC---SCCCCEEEETTTTEEEEEETT----TTEEEECBTTSCSCE
T ss_pred CCCcEEEEeCCC---CCccEEEEEeCCCeEEEEcCC----CCeEEEEeCCCCceE
Confidence 655444321100 1112333 36899998776 458999999876433
No 90
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=45.93 E-value=1.3e+02 Score=25.09 Aligned_cols=163 Identities=9% Similarity=0.065 Sum_probs=83.6
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCC-----CccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCC
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRK-----NVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKP 197 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~-----~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~ 197 (316)
++.+|.+++.+ ......+.++|+..+....+...... .......++.+|+..+. ++... ....
T Consensus 151 ~~~~g~lyv~d-~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~--l~v~d---------~~~~ 218 (329)
T 3fvz_A 151 EPSTGAVFVSD-GYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ--LCVAD---------RENG 218 (329)
T ss_dssp CTTTCCEEEEE-CSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE--EEEEE---------TTTT
T ss_pred eCCCCeEEEEe-CCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE--EEEEE---------CCCC
Confidence 33378888887 32277899999655444444322110 11123678888876443 22222 3356
Q ss_pred eEEEEEeCCCceEe-cCCCCceeccCCcceeeCCeEEEEEecCC---CCccEEEEEeCCCceeeEecCCCCccccCCCCc
Q 047073 198 QVEVHTIGTNTWRN-IGDLPYVLNQPYYGAFLNSALHWYAHSHD---KRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPI 273 (316)
Q Consensus 198 ~~~vy~s~t~~W~~-~~~~~~~~~~~~~~v~~~G~lywl~~~~~---~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~ 273 (316)
.+.+|+..++.... +......... ..-.+..|.+|....... .....|..+|+.+.+....-. +......
T Consensus 219 ~I~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~-~~~~~~~---- 292 (329)
T 3fvz_A 219 RIQCFKTDTKEFVREIKHASFGRNV-FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFK-PVRKHFD---- 292 (329)
T ss_dssp EEEEEETTTCCEEEEECCTTTTTCE-EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEEC-CSSSCCS----
T ss_pred EEEEEECCCCcEEEEEeccccCCCc-ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEc-CCCCccC----
Confidence 89999988776533 2111100000 000111244444433211 014578999988776544311 1111111
Q ss_pred cceEEEEE-CCeEEEEEccCCCeEEEEEEeeC
Q 047073 274 NSISVGVS-GGFLYLCDGFLEPNLDIWIMKKY 304 (316)
Q Consensus 274 ~~~~L~~~-~G~L~lv~~~~~~~~~vW~l~~~ 304 (316)
....++.. +|.|++.... +..+.+|.++..
T Consensus 293 ~p~~ia~~~dG~lyvad~~-~~~I~~~~~~~~ 323 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDAH-TNTVWKFTLTEK 323 (329)
T ss_dssp SEEEEEECTTSEEEEEESS-SCCEEEEEEEEC
T ss_pred CeeEEEECCCCCEEEEECC-CCEEEEEeCCcc
Confidence 22334443 6778877775 788999988753
No 91
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=45.62 E-value=44 Score=25.80 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=29.3
Q ss_pred CceEEEEcCCCC-ceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEE
Q 047073 138 QDIISVCNPILG-DHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQIL 184 (316)
Q Consensus 138 ~~~~~v~NP~T~-~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~ 184 (316)
..+++++||.|+ .|...-.. ...+.+.+|...+.|+|+.+.
T Consensus 15 rA~Vm~~D~~tk~~WvP~g~~------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 15 RAHVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEEECTTSSCCSEESCSS------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEECCCCCCceeecCCC------CeEEEEEEcCCCCEEEEEEcc
Confidence 558999999997 89642222 125566688888889998753
No 92
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=45.40 E-value=1.3e+02 Score=25.09 Aligned_cols=140 Identities=11% Similarity=0.039 Sum_probs=73.1
Q ss_pred eeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 122 LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 122 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
++..+|.|.+.+.. ...+.++|+..+....+-... .....++.+|+..+ .++.... .....+++
T Consensus 84 vd~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~----~~~P~~iavdp~~g--~ly~~d~--------~~~~~I~~ 147 (316)
T 1ijq_A 84 VDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN----GSKPRAIVVDPVHG--FMYWTDW--------GTPAKIKK 147 (316)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECT----TCCEEEEEEETTTT--EEEEEEC--------SSSCEEEE
T ss_pred EeecCCeEEEEECC--CCEEEEEeCCCCceEEEEECC----CCCcceEEeCCCCC--EEEEEcc--------CCCCeEEE
Confidence 34456667666533 678888888766544432211 11246788887654 2222221 11245666
Q ss_pred EEeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceE
Q 047073 202 HTIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSIS 277 (316)
Q Consensus 202 y~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~ 277 (316)
++.....-+.+.... ....+++.+ +|.|||.... ...|.+||++...-+.+ .. +.... ....
T Consensus 148 ~~~dG~~~~~~~~~~---~~~P~gla~d~~~~~lY~~D~~----~~~I~~~d~dg~~~~~~~~~-~~~~~------~P~g 213 (316)
T 1ijq_A 148 GGLNGVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTILED-EKRLA------HPFS 213 (316)
T ss_dssp EETTSCCEEEEECSS---CSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEEEC-TTTTS------SEEE
T ss_pred EcCCCCCeEEEEECC---CCCceEEEEeccCCEEEEEECC----CCeEEEEecCCCceEEEeec-CCccC------CcEE
Confidence 665432222221100 111224444 5899998766 46899999986544433 32 11110 2234
Q ss_pred EEEECCeEEEEEcc
Q 047073 278 VGVSGGFLYLCDGF 291 (316)
Q Consensus 278 L~~~~G~L~lv~~~ 291 (316)
++..+|.|++....
T Consensus 214 iav~~~~ly~~d~~ 227 (316)
T 1ijq_A 214 LAVFEDKVFWTDII 227 (316)
T ss_dssp EEEETTEEEEEETT
T ss_pred EEEECCEEEEEECC
Confidence 55567788877753
No 93
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=45.00 E-value=1.3e+02 Score=24.81 Aligned_cols=114 Identities=9% Similarity=-0.044 Sum_probs=60.7
Q ss_pred ceEEeeeeccCCceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 127 GLICLHEFSYKQDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 127 Gll~~~~~~~~~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
..+.+.. . .+.++++|+.+++... ++.... .......++.+++..+ +-.+ .. .....+.+|+..
T Consensus 197 ~~l~~~~-~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-~l~~-~~---------~~~~~v~~~d~~ 261 (353)
T 3vgz_A 197 KRLYTTN-A--DGELITIDTADNKILSRKKLLDD-GKEHFFINISLDTARQ-RAFI-TD---------SKAAEVLVVDTR 261 (353)
T ss_dssp TEEEEEC-T--TSEEEEEETTTTEEEEEEECCCS-SSCCCEEEEEEETTTT-EEEE-EE---------SSSSEEEEEETT
T ss_pred CEEEEEc-C--CCeEEEEECCCCeEEEEEEcCCC-CCCcccceEEECCCCC-EEEE-Ee---------CCCCEEEEEECC
Confidence 3444444 3 6788999999988653 332111 1222355677777543 2222 21 224678899988
Q ss_pred CCceEecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceee-EecC
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFR-QFPG 261 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~-~i~l 261 (316)
++.-...-..+.. ..-.+.-+|...|+.... ...|..+|+.+.+.. .++.
T Consensus 262 ~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 262 NGNILAKVAAPES---LAVLFNPARNEAYVTHRQ---AGKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp TCCEEEEEECSSC---CCEEEETTTTEEEEEETT---TTEEEEEETTTTEEEEEEEC
T ss_pred CCcEEEEEEcCCC---ceEEECCCCCEEEEEECC---CCeEEEEECCCCeEEEEEec
Confidence 8754322111111 111223367655555543 458999999877553 3455
No 94
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=44.17 E-value=1.4e+02 Score=24.98 Aligned_cols=96 Identities=7% Similarity=-0.002 Sum_probs=46.5
Q ss_pred CeEEEE--EeCCCceEecCCCCceeccCCccee--eCCe-EEEEEecCCCCccEEEEE--eCCCceeeEe-cCCCCcccc
Q 047073 197 PQVEVH--TIGTNTWRNIGDLPYVLNQPYYGAF--LNSA-LHWYAHSHDKRTAFMCSF--DLGDEQFRQF-PGPPTREYE 268 (316)
Q Consensus 197 ~~~~vy--~s~t~~W~~~~~~~~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~i~~f--D~~~~~~~~i-~lPP~~~~~ 268 (316)
..+.+| +..++..+.+... . ......+. -+|. +|.....+.. ...|.+| |..+.....+ .. +....
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~-~--~~~p~~l~~spdg~~l~~~~~~~~~-~~~v~~~~~~~~~g~~~~~~~~-~~~~~- 100 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA-E--VANPSYLIPSADGKFVYSVNEFSKD-QAAVSAFAFDKEKGTLHLLNTQ-KTMGA- 100 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE-E--CSCCCSEEECTTSSEEEEEECCSST-TCEEEEEEEETTTTEEEEEEEE-ECSSS-
T ss_pred CCEEEEEEeCCCCCEEEeecc-c--CCCCceEEECCCCCEEEEEEccCCC-CCcEEEEEEeCCCCcEEEeeEe-ccCCC-
Confidence 345555 4567776655322 1 01111122 2565 6655543111 2355555 4554666655 23 21111
Q ss_pred CCCCccceEEEEECCeEEEEEccCCCeEEEEEEeeC
Q 047073 269 KCRPINSISVGVSGGFLYLCDGFLEPNLDIWIMKKY 304 (316)
Q Consensus 269 ~~~~~~~~~L~~~~G~L~lv~~~~~~~~~vW~l~~~ 304 (316)
....+.. +|+..++....+..+.+|.++..
T Consensus 101 -----~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 101 -----DPCYLTT-NGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp -----CEEEEEE-CSSEEEEEETTTTEEEEEEBCTT
T ss_pred -----CcEEEEE-CCCEEEEEECCCCEEEEEEeCCC
Confidence 2234444 77755554444789999998643
No 95
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=43.45 E-value=1.5e+02 Score=24.93 Aligned_cols=154 Identities=8% Similarity=0.079 Sum_probs=71.1
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
+.-+-+|-+++.... ++.+.|||..++++........ .....+..+.+.|.. .+ ++.. .....+.
T Consensus 22 l~~sp~g~~las~~~--D~~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g-~~--l~s~---------s~D~~v~ 86 (345)
T 3fm0_A 22 LAWNPAGTLLASCGG--DRRIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCG-NY--LASA---------SFDATTC 86 (345)
T ss_dssp EEECTTSSCEEEEET--TSCEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTS-SE--EEEE---------ETTSCEE
T ss_pred EEECCCCCEEEEEcC--CCeEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCC-CE--EEEE---------ECCCcEE
Confidence 333445555444424 7789999988876542211111 222336677777642 22 2222 1235577
Q ss_pred EEEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCc-eeeEe-cCCCCccccCCCCccce
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDE-QFRQF-PGPPTREYEKCRPINSI 276 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~-~~~~i-~lPP~~~~~~~~~~~~~ 276 (316)
+++..++.+..+..+... ...-.++.+ +|.+...+.. ...|..+|+.++ ....+ .+ ..+.. .-.
T Consensus 87 iw~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~----D~~v~iwd~~~~~~~~~~~~~-~~h~~------~v~ 154 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGH-ENEVKSVAWAPSGNLLATCSR----DKSVWVWEVDEEDEYECVSVL-NSHTQ------DVK 154 (345)
T ss_dssp EEEECCC-EEEEEEECCC-SSCEEEEEECTTSSEEEEEET----TSCEEEEEECTTSCEEEEEEE-CCCCS------CEE
T ss_pred EEEccCCCeEEEEEccCC-CCCceEEEEeCCCCEEEEEEC----CCeEEEEECCCCCCeEEEEEe-cCcCC------CeE
Confidence 888777765433211100 000011222 4554444333 347888888654 22222 12 11110 111
Q ss_pred EEEEE-CCeEEEEEccCCCeEEEEEEe
Q 047073 277 SVGVS-GGFLYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 277 ~L~~~-~G~L~lv~~~~~~~~~vW~l~ 302 (316)
.+... +|++.+.... +.++.+|.++
T Consensus 155 ~~~~~p~~~~l~s~s~-d~~i~~w~~~ 180 (345)
T 3fm0_A 155 HVVWHPSQELLASASY-DDTVKLYREE 180 (345)
T ss_dssp EEEECSSSSCEEEEET-TSCEEEEEEE
T ss_pred EEEECCCCCEEEEEeC-CCcEEEEEec
Confidence 22222 4554444443 6788888764
No 96
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=40.54 E-value=1.7e+02 Score=24.82 Aligned_cols=145 Identities=10% Similarity=0.019 Sum_probs=66.0
Q ss_pred CceEEEEcCCCCc------eEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEe
Q 047073 138 QDIISVCNPILGD------HLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRN 211 (316)
Q Consensus 138 ~~~~~v~NP~T~~------~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~ 211 (316)
.+.+.|||..+++ ......... ........+.+.+..+.+ ++. . .....+.+|+..++.-..
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-l~~-~---------~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDEVISLAWNQSLAHV-FAS-A---------GSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCCCCEEEECSSCTTE-EEE-E---------SSSSCEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcccccccccccccccc-CCCCCeeEEEeCCCCCcE-EEE-E---------cCCCCEEEEECCCCCcce
Confidence 7789999999886 222211111 122235566776653333 222 1 224568889888775422
Q ss_pred cCCCCcee---ccCCcceee--CC-eEEEEEecCCCCccEEEEEeCCCceeeEecCCC-CccccCCCCccceEEEEE--C
Q 047073 212 IGDLPYVL---NQPYYGAFL--NS-ALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPP-TREYEKCRPINSISVGVS--G 282 (316)
Q Consensus 212 ~~~~~~~~---~~~~~~v~~--~G-~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP-~~~~~~~~~~~~~~L~~~--~ 282 (316)
.-...... ...-.++.+ +| .+...+..+. ....|..+|+.+..-....+ . .... ....+... +
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~~~~i~~~d~~~~~~~~~~~-~~~~~~------~v~~~~~s~~~ 274 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD-NDPSILIWDLRNANTPLQTL-NQGHQK------GILSLDWCHQD 274 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS-SSCCCCEEETTSTTSCSBCC-CSCCSS------CEEEEEECSSC
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCC-CCceEEEEeCCCCCCCcEEe-ecCccC------ceeEEEeCCCC
Confidence 11111000 000112222 23 3444433310 01268888887643111122 1 1110 22233332 5
Q ss_pred CeEEEEEccCCCeEEEEEEee
Q 047073 283 GFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 283 G~L~lv~~~~~~~~~vW~l~~ 303 (316)
|++.+.... +..+.+|-++.
T Consensus 275 ~~~l~s~~~-dg~v~~wd~~~ 294 (416)
T 2pm9_A 275 EHLLLSSGR-DNTVLLWNPES 294 (416)
T ss_dssp SSCEEEEES-SSEEEEECSSS
T ss_pred CCeEEEEeC-CCCEEEeeCCC
Confidence 565555554 67888887643
No 97
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=39.34 E-value=1.8e+02 Score=24.79 Aligned_cols=106 Identities=9% Similarity=0.051 Sum_probs=59.5
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
.+.|++.. ...+..+++.+.+...+-... ....++.+|+..+. |+... .....+..++..
T Consensus 44 ~~~ll~~~----~~~I~~i~~~g~~~~~~~~~~-----~~~~~l~~d~~~~~--ly~~D---------~~~~~I~r~~~~ 103 (349)
T 3v64_C 44 EPVLLFAN----RIDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRREL--VFWSD---------VTLDRILRANLN 103 (349)
T ss_dssp CCEEEEEC----BSCEEEECTTSCCEEEEECSC-----SCEEEEEEETTTTE--EEEEE---------TTTTEEEEEETT
T ss_pred CceeEeec----ccceEEEeCCCCeeEEeecCC-----CceEEEEEeccccE--EEEEe---------ccCCceEEEecC
Confidence 56666666 556778888776655432211 12678888876543 33322 223556666666
Q ss_pred CCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeE
Q 047073 206 TNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQ 258 (316)
Q Consensus 206 t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~ 258 (316)
++.-+.+.... .....++.+ +|.|||.... ...|.++|+++..-..
T Consensus 104 g~~~~~~~~~~---~~~p~glavd~~~g~ly~~d~~----~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 104 GSNVEEVVSTG---LESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCSCEEEECSS---CSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEE
T ss_pred CCCceEEEeCC---CCCccEEEEecCCCeEEEEcCC----CCeEEEEcCCCCceEE
Confidence 55433321100 011123333 6899998776 4589999998765433
No 98
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=38.71 E-value=1.9e+02 Score=24.82 Aligned_cols=112 Identities=8% Similarity=-0.022 Sum_probs=60.0
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
.+.+|-+++.... .+.+.+||+.+++... ++.. ......+.+++... +- +... .....+.+
T Consensus 177 ~~~~~~~~~s~~~--d~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~l-~~~~---------~~~~~i~~ 238 (433)
T 3bws_A 177 IPEHNELWVSQMQ--ANAVHVFDLKTLAYKATVDLT-----GKWSKILLYDPIRD-LV-YCSN---------WISEDISV 238 (433)
T ss_dssp EGGGTEEEEEEGG--GTEEEEEETTTCCEEEEEECS-----SSSEEEEEEETTTT-EE-EEEE---------TTTTEEEE
T ss_pred EcCCCEEEEEECC--CCEEEEEECCCceEEEEEcCC-----CCCeeEEEEcCCCC-EE-EEEe---------cCCCcEEE
Confidence 3456766666523 6899999999877543 3321 12245667776432 22 2221 22457889
Q ss_pred EEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCC----CccEEEEEeCCCcee
Q 047073 202 HTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDK----RTAFMCSFDLGDEQF 256 (316)
Q Consensus 202 y~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~----~~~~i~~fD~~~~~~ 256 (316)
|+..++.....-..... ..++.+ +|...+.+..+.+ ....|..+|+.+...
T Consensus 239 ~d~~~~~~~~~~~~~~~----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 239 IDRKTKLEIRKTDKIGL----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EETTTTEEEEECCCCSE----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EECCCCcEEEEecCCCC----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 99888755332111111 112222 5655555443211 034788999987754
No 99
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=38.37 E-value=1.5e+02 Score=23.46 Aligned_cols=111 Identities=9% Similarity=0.002 Sum_probs=61.3
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
-..+|-+.+.+ . ...++++|+.++....++.... ....++.+++.. . ++... .....+.+|
T Consensus 74 ~~~~g~l~v~~-~--~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g-~--l~v~~---------~~~~~i~~~ 134 (270)
T 1rwi_B 74 VDGAGTVYVTD-F--NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQG-A--VYVAD---------RGNNRVVKL 134 (270)
T ss_dssp ECTTCCEEEEE-T--TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTC-C--EEEEE---------GGGTEEEEE
T ss_pred ECCCCCEEEEc-C--CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCC-C--EEEEE---------CCCCEEEEE
Confidence 33467776666 3 6789999999887766543211 225677777642 2 33322 113456666
Q ss_pred EeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEe
Q 047073 203 TIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF 259 (316)
Q Consensus 203 ~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i 259 (316)
+.++.......... .....++.+ +|.+|+.... ...|..||..+......
T Consensus 135 ~~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~----~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 135 AAGSKTQTVLPFTG---LNDPDGVAVDNSGNVYVTDTD----NNRVVKLEAESNNQVVL 186 (270)
T ss_dssp CTTCCSCEECCCCS---CCSCCCEEECTTCCEEEEEGG----GTEEEEECTTTCCEEEC
T ss_pred ECCCceeEeecccc---CCCceeEEEeCCCCEEEEECC----CCEEEEEecCCCceEee
Confidence 55554433221110 111123433 5887766554 35899999988765443
No 100
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=37.27 E-value=2.1e+02 Score=24.88 Aligned_cols=140 Identities=9% Similarity=0.103 Sum_probs=64.1
Q ss_pred CceEEEEcCCCCc---eEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCc-eEecC
Q 047073 138 QDIISVCNPILGD---HLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNT-WRNIG 213 (316)
Q Consensus 138 ~~~~~v~NP~T~~---~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~-W~~~~ 213 (316)
.+.+.|||..++. ...-+..........+..+.+.+..+.+ ++.. .....+.+|+.+++. .+.+.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~-l~s~----------~~dg~i~i~d~~~~~~~~~~~ 271 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESL-FGSV----------ADDQKLMIWDTRNNNTSKPSH 271 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTE-EEEE----------ETTSEEEEEETTCSCSSSCSE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCE-EEEE----------eCCCeEEEEECCCCCCCccee
Confidence 7889999988732 1111111110122236677777643332 2222 124678889887652 11110
Q ss_pred CCCceeccCCcceee--CCe-EEEEEecCCCCccEEEEEeCCCce--eeEecCCCCccccCCCCccceEEEEE-CC-eEE
Q 047073 214 DLPYVLNQPYYGAFL--NSA-LHWYAHSHDKRTAFMCSFDLGDEQ--FRQFPGPPTREYEKCRPINSISVGVS-GG-FLY 286 (316)
Q Consensus 214 ~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~i~~fD~~~~~--~~~i~lPP~~~~~~~~~~~~~~L~~~-~G-~L~ 286 (316)
... .....-.++.+ +|. ++..+.. ...|..||+.+.. ...+.. ... ....+... +| .+.
T Consensus 272 ~~~-~~~~~v~~i~~~p~~~~~l~tg~~----dg~v~vwd~~~~~~~~~~~~~---h~~------~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 272 TVD-AHTAEVNCLSFNPYSEFILATGSA----DKTVALWDLRNLKLKLHSFES---HKD------EIFQVQWSPHNETIL 337 (430)
T ss_dssp EEE-CCSSCEEEEEECSSCTTEEEEEET----TSEEEEEETTCTTSCSEEEEC---CSS------CEEEEEECSSCTTEE
T ss_pred Eee-cCCCCeEEEEeCCCCCCEEEEEeC----CCeEEEEeCCCCCCCeEEeec---CCC------CEEEEEECCCCCCEE
Confidence 000 00000112333 243 4444444 4589999987632 222221 110 11222222 34 355
Q ss_pred EEEccCCCeEEEEEEee
Q 047073 287 LCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 287 lv~~~~~~~~~vW~l~~ 303 (316)
+.... +..+.||-+..
T Consensus 338 ~s~~~-d~~i~iwd~~~ 353 (430)
T 2xyi_A 338 ASSGT-DRRLHVWDLSK 353 (430)
T ss_dssp EEEET-TSCCEEEEGGG
T ss_pred EEEeC-CCcEEEEeCCC
Confidence 55543 67888998765
No 101
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=37.21 E-value=1.7e+02 Score=24.00 Aligned_cols=120 Identities=9% Similarity=-0.030 Sum_probs=61.5
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
+.+|-|.+.+.. ...++++||.+++...+..... ....++.+++.. +++..... .. .....+.+|+
T Consensus 53 ~~~g~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg---~l~v~~~~-~~----~~~~~i~~~d 118 (333)
T 2dg1_A 53 DRQGQLFLLDVF--EGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDG---RLFVCYLG-DF----KSTGGIFAAT 118 (333)
T ss_dssp CTTSCEEEEETT--TCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTS---CEEEEECT-TS----SSCCEEEEEC
T ss_pred CCCCCEEEEECC--CCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCC---cEEEEeCC-CC----CCCceEEEEe
Confidence 346766655423 6789999999998776432111 225677777653 23322210 00 1124677788
Q ss_pred eCCCceEe-cCCCCceeccCCcceee--CCeEEEEEecCCC--CccEEEEEeCCCceeeEe
Q 047073 204 IGTNTWRN-IGDLPYVLNQPYYGAFL--NSALHWYAHSHDK--RTAFMCSFDLGDEQFRQF 259 (316)
Q Consensus 204 s~t~~W~~-~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~--~~~~i~~fD~~~~~~~~i 259 (316)
..++.-+. +...... .....+.+ +|.+|.....+.. ....|..+|.++.++..+
T Consensus 119 ~~~~~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp TTSCSCEEEECSSSSC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CCCCEEEEEEccCccC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 77765442 2211100 01112222 6777665432100 034799999987666544
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=37.01 E-value=2e+02 Score=24.56 Aligned_cols=161 Identities=7% Similarity=-0.125 Sum_probs=0.0
Q ss_pred ceeeeccCc-eEEeeeeccCCceEEEEcCCCCceEecCC-CCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCC
Q 047073 119 LSLLSSCNG-LICLHEFSYKQDIISVCNPILGDHLVLPQ-LKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSK 196 (316)
Q Consensus 119 ~~~~~s~~G-ll~~~~~~~~~~~~~v~NP~T~~~~~lP~-~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~ 196 (316)
..+.-+-+| .+++.... .+.+.|||..+++....-. . ........+.+++ .+.+-+.. ...
T Consensus 135 ~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~-----------~~d 197 (402)
T 2aq5_A 135 GIVAWHPTAQNVLLSAGC--DNVILVWDVGTGAAVLTLGPD---VHPDTIYSVDWSR-DGALICTS-----------CRD 197 (402)
T ss_dssp EEEEECSSBTTEEEEEET--TSCEEEEETTTTEEEEEECTT---TCCSCEEEEEECT-TSSCEEEE-----------ETT
T ss_pred EEEEECcCCCCEEEEEcC--CCEEEEEECCCCCccEEEecC---CCCCceEEEEECC-CCCEEEEE-----------ecC
Q ss_pred CeEEEEEeCCCceEecC-CCCceeccCCcceeeCCeEEEEE---ecCCCCccEEEEEeCCCceeeEecCCCCccccCCCC
Q 047073 197 PQVEVHTIGTNTWRNIG-DLPYVLNQPYYGAFLNSALHWYA---HSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRP 272 (316)
Q Consensus 197 ~~~~vy~s~t~~W~~~~-~~~~~~~~~~~~v~~~G~lywl~---~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~ 272 (316)
..+.+|+.+++.-...- ..........-...-+|.+...+ .. ...|..+|+.+..-..... .......
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~----d~~i~iwd~~~~~~~~~~~-~~~~~~~--- 269 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS----ERQVALWDTKHLEEPLSLQ-ELDTSSG--- 269 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC----CEEEEEEETTBCSSCSEEE-ECCCCSS---
T ss_pred CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC----CceEEEEcCccccCCceEE-eccCCCc---
Q ss_pred ccceEEEEECCeEEEEEccCCCeEEEEEEeeCC
Q 047073 273 INSISVGVSGGFLYLCDGFLEPNLDIWIMKKYG 305 (316)
Q Consensus 273 ~~~~~L~~~~G~L~lv~~~~~~~~~vW~l~~~~ 305 (316)
.......-+|+..++....+..+.+|-++...
T Consensus 270 -v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 270 -VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp -CEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred -eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
No 103
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=36.78 E-value=1.7e+02 Score=23.77 Aligned_cols=137 Identities=13% Similarity=0.115 Sum_probs=65.0
Q ss_pred CceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEe-cC-C
Q 047073 138 QDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRN-IG-D 214 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~-~~-~ 214 (316)
.+.+.+||..+++... ++.. ......+.+++.. .+ +.... ....+.+|+..++.-.. +. .
T Consensus 128 d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~-~~--l~~~~---------~d~~i~~wd~~~~~~~~~~~~~ 190 (312)
T 4ery_A 128 DESVRIWDVKTGKCLKTLPAH-----SDPVSAVHFNRDG-SL--IVSSS---------YDGLCRIWDTASGQCLKTLIDD 190 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTS-SE--EEEEE---------TTSCEEEEETTTCCEEEEECCS
T ss_pred CCcEEEEECCCCEEEEEecCC-----CCcEEEEEEcCCC-CE--EEEEe---------CCCcEEEEECCCCceeeEEecc
Confidence 6789999998887543 3321 1225566666532 22 22221 23568889888765322 11 1
Q ss_pred CCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceeeE-ecCCCCccccCCCCccceEEEEECCeEEEEEccCC
Q 047073 215 LPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQ-FPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLE 293 (316)
Q Consensus 215 ~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~-i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~ 293 (316)
....... -...-+|.....+.. ...|..+|+.+..... +.. ....... ........+|.+.+... .+
T Consensus 191 ~~~~~~~--~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~l~sg~-~d 258 (312)
T 4ery_A 191 DNPPVSF--VKFSPNGKYILAATL----DNTLKLWDYSKGKCLKTYTG-HKNEKYC----IFANFSVTGGKWIVSGS-ED 258 (312)
T ss_dssp SCCCEEE--EEECTTSSEEEEEET----TTEEEEEETTTTEEEEEECS-SCCSSSC----CCEEEECSSSCEEEECC-TT
T ss_pred CCCceEE--EEECCCCCEEEEEcC----CCeEEEEECCCCcEEEEEEe-cCCceEE----EEEEEEeCCCcEEEEEC-CC
Confidence 0000000 011124554444433 4589999998775432 222 1111000 11111222445444444 37
Q ss_pred CeEEEEEEee
Q 047073 294 PNLDIWIMKK 303 (316)
Q Consensus 294 ~~~~vW~l~~ 303 (316)
..+.+|-++.
T Consensus 259 g~i~vwd~~~ 268 (312)
T 4ery_A 259 NLVYIWNLQT 268 (312)
T ss_dssp SCEEEEETTT
T ss_pred CEEEEEECCC
Confidence 7888887653
No 104
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=36.27 E-value=2.8e+02 Score=26.10 Aligned_cols=135 Identities=11% Similarity=0.063 Sum_probs=73.9
Q ss_pred eeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 122 LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 122 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
++..+|.|...+.. ..++.++|+-.+....|.... .....++.+||..+. ++.... .....++.
T Consensus 87 vD~~~~~LY~tD~~--~~~I~v~~~dG~~~~~l~~~~----l~~P~~iavdp~~G~--lY~tD~--------g~~~~I~r 150 (628)
T 4a0p_A 87 VDWLGKNLYWADTG--TNRIEVSKLDGQHRQVLVWKD----LDSPRALALDPAEGF--MYWTEW--------GGKPKIDR 150 (628)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTSTTCEEEECSS----CCCEEEEEEETTTTE--EEEEEC--------SSSCEEEE
T ss_pred EEeCCCEEEEEECC--CCEEEEEecCCCcEEEEEeCC----CCCcccEEEccCCCe--EEEeCC--------CCCCEEEE
Confidence 34456666666633 678888888766554443211 122568888886552 333221 11345555
Q ss_pred EEeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe--cCCCCccccCCCCccce
Q 047073 202 HTIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF--PGPPTREYEKCRPINSI 276 (316)
Q Consensus 202 y~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i--~lPP~~~~~~~~~~~~~ 276 (316)
++.....-+.+.. ......++.+ +|.|||.... ...|.++|+++..-..+ .+ + ...
T Consensus 151 ~~~dG~~~~~l~~----~~~~P~GlalD~~~~~LY~aD~~----~~~I~~~d~dG~~~~v~~~~l-~----------~P~ 211 (628)
T 4a0p_A 151 AAMDGSERTTLVP----NVGRANGLTIDYAKRRLYWTDLD----TNLIESSNMLGLNREVIADDL-P----------HPF 211 (628)
T ss_dssp EETTSCSCEEEEC----SCSSEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEEECC-S----------CEE
T ss_pred EeCCCCceEEEEC----CCCCcceEEEccccCEEEEEECC----CCEEEEEcCCCCceEEeeccC-C----------Cce
Confidence 5554433333211 0111124555 4889999776 46899999976533333 12 1 334
Q ss_pred EEEEECCeEEEEEcc
Q 047073 277 SVGVSGGFLYLCDGF 291 (316)
Q Consensus 277 ~L~~~~G~L~lv~~~ 291 (316)
.|+..+|.|++....
T Consensus 212 glav~~~~ly~tD~~ 226 (628)
T 4a0p_A 212 GLTQYQDYIYWTDWS 226 (628)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEEECCEEEEecCC
Confidence 566677888777653
No 105
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=35.59 E-value=2e+02 Score=24.18 Aligned_cols=74 Identities=18% Similarity=0.172 Sum_probs=38.8
Q ss_pred ceee--CCeEEEEEecCC-CCccEEEEEeCCCce-eeEecCCCCccccCCCCccceEEEEE--CCeEEEEEcc--CCCeE
Q 047073 225 GAFL--NSALHWYAHSHD-KRTAFMCSFDLGDEQ-FRQFPGPPTREYEKCRPINSISVGVS--GGFLYLCDGF--LEPNL 296 (316)
Q Consensus 225 ~v~~--~G~lywl~~~~~-~~~~~i~~fD~~~~~-~~~i~lPP~~~~~~~~~~~~~~L~~~--~G~L~lv~~~--~~~~~ 296 (316)
++.+ +|.||++..... .....|+.||+.+.+ ...+.+|........ ....++.. +|.+++.... ....+
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~---~~~~v~vd~~~g~~yvtd~~~~~~~~i 147 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNS---FVNDLAVDLIHNFVYISDPAPDDKAAL 147 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTC---CCCEEEEETTTTEEEEEECCSGGGCEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhccccc---ccceEEEecCCCEEEEEcCccCCCCeE
Confidence 4555 488999874410 002379999999876 566777322111100 22344554 4566665541 13455
Q ss_pred EEEEE
Q 047073 297 DIWIM 301 (316)
Q Consensus 297 ~vW~l 301 (316)
.+|-+
T Consensus 148 ~v~d~ 152 (343)
T 2qe8_A 148 IRVDL 152 (343)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 55544
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=35.44 E-value=2.1e+02 Score=24.33 Aligned_cols=156 Identities=10% Similarity=0.043 Sum_probs=73.4
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
+.-+-+|-++... + ...+.+++..+++......... .......+.+.|.. .+ ++.... .. .....+.
T Consensus 182 v~fspdg~~l~s~-s--~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~fspdg-~~-l~~~s~-d~-----~~~~~i~ 248 (365)
T 4h5i_A 182 LHFSTDGKVVAYI-T--GSSLEVISTVTGSCIARKTDFD--KNWSLSKINFIADD-TV-LIAASL-KK-----GKGIVLT 248 (365)
T ss_dssp EEECTTSSEEEEE-C--SSCEEEEETTTCCEEEEECCCC--TTEEEEEEEEEETT-EE-EEEEEE-SS-----SCCEEEE
T ss_pred EEEccCCceEEec-c--ceeEEEEEeccCcceeeeecCC--CCCCEEEEEEcCCC-CE-EEEEec-CC-----cceeEEe
Confidence 3344566655554 3 5667788888877653222211 11223445554431 12 222211 11 1233455
Q ss_pred EEEeCCCceEecCCCCceeccCCc---cee--eCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccc
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYY---GAF--LNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINS 275 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~---~v~--~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~ 275 (316)
.++...+........ ....... ++. -+|.+...+.. ...|..+|+.+.+....-+ ..+.. .-
T Consensus 249 ~~~~~~~~~~~~~~~--~~~~~~~~V~~~~~Spdg~~lasgs~----D~~V~iwd~~~~~~~~~~~-~gH~~------~V 315 (365)
T 4h5i_A 249 KISIKSGNTSVLRSK--QVTNRFKGITSMDVDMKGELAVLASN----DNSIALVKLKDLSMSKIFK-QAHSF------AI 315 (365)
T ss_dssp EEEEETTEEEEEEEE--EEESSCSCEEEEEECTTSCEEEEEET----TSCEEEEETTTTEEEEEET-TSSSS------CE
T ss_pred ecccccceecceeee--eecCCCCCeEeEEECCCCCceEEEcC----CCEEEEEECCCCcEEEEec-CcccC------CE
Confidence 555555544322100 0000111 121 26665555544 4579999998865432222 11111 22
Q ss_pred eEEEEE-CCeEEEEEccCCCeEEEEEEee
Q 047073 276 ISVGVS-GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 276 ~~L~~~-~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
..++-. +|++.+... .+.++.||.+..
T Consensus 316 ~~v~fSpdg~~laS~S-~D~tvrvw~ip~ 343 (365)
T 4h5i_A 316 TEVTISPDSTYVASVS-AANTIHIIKLPL 343 (365)
T ss_dssp EEEEECTTSCEEEEEE-TTSEEEEEECCT
T ss_pred EEEEECCCCCEEEEEe-CCCeEEEEEcCC
Confidence 233433 677655544 489999999964
No 107
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=35.17 E-value=2e+02 Score=24.22 Aligned_cols=137 Identities=8% Similarity=-0.082 Sum_probs=68.7
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCce-EecCCCC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTW-RNIGDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W-~~~~~~~ 216 (316)
.+.+.|||..+++....-... ........+.+.|..+.+-+. .. ....+.+|+..++.= +.+....
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~--~~~~~v~~v~~sp~~~~~la~--g~---------~d~~i~~wd~~~~~~~~~~~~~~ 269 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFC--ASDTIPTSVTWHPEKDDTFAC--GD---------ETGNVSLVNIKNPDSAQTSAVHS 269 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCT--TCCSCEEEEEECTTSTTEEEE--EE---------SSSCEEEEESSCGGGCEEECCCS
T ss_pred CCceEEEECCCCceeeeeeec--cccccccchhhhhcccceEEE--ee---------cccceeEEECCCCcEeEEEeccc
Confidence 678999998887754322221 112225566776654443222 21 135678888776531 1121111
Q ss_pred ceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE--CCeEEEEEccC
Q 047073 217 YVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS--GGFLYLCDGFL 292 (316)
Q Consensus 217 ~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~--~G~L~lv~~~~ 292 (316)
.. -.++.+ +|.-|.++... ...|..+|+.+.+.... + . +.. .-..++.. +|++.+....
T Consensus 270 ~~----v~~l~~sp~~~~~lasgs~---D~~i~iwd~~~~~~~~~-~-~-H~~------~V~~vafsP~d~~~l~s~s~- 332 (357)
T 4g56_B 270 QN----ITGLAYSYHSSPFLASISE---DCTVAVLDADFSEVFRD-L-S-HRD------FVTGVAWSPLDHSKFTTVGW- 332 (357)
T ss_dssp SC----EEEEEECSSSSCCEEEEET---TSCEEEECTTSCEEEEE-C-C-CSS------CEEEEEECSSSTTEEEEEET-
T ss_pred ee----EEEEEEcCCCCCEEEEEeC---CCEEEEEECCCCcEeEE-C-C-CCC------CEEEEEEeCCCCCEEEEEcC-
Confidence 00 012222 44333333332 34788899987754322 1 1 111 22234432 5776655554
Q ss_pred CCeEEEEEEeeC
Q 047073 293 EPNLDIWIMKKY 304 (316)
Q Consensus 293 ~~~~~vW~l~~~ 304 (316)
+.++.+|-+...
T Consensus 333 Dg~v~iW~~~~~ 344 (357)
T 4g56_B 333 DHKVLHHHLPSE 344 (357)
T ss_dssp TSCEEEEECC--
T ss_pred CCeEEEEECCCC
Confidence 899999998653
No 108
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=34.26 E-value=2.3e+02 Score=24.45 Aligned_cols=144 Identities=8% Similarity=0.010 Sum_probs=65.7
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.|++..+++....+..........+..+.+.+.....-++... .....+.+|+..++.-...-....
T Consensus 251 D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g---------s~D~~I~iwd~~t~~~~~~~~~~~ 321 (420)
T 4gga_A 251 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG---------TSDRHIRIWNVCSGACLSAVDAHS 321 (420)
T ss_dssp TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC---------TTTCEEEEEETTTTEEEEEEECSS
T ss_pred cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEee---------cCCCEEEEEeCCccccceeecccc
Confidence 45667777766653322211110122235566666654443322211 224668888888774322111100
Q ss_pred eeccCCcceeeCCeEEEEEe-cCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCeEEEEEccCCCe
Q 047073 218 VLNQPYYGAFLNSALHWYAH-SHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGFLYLCDGFLEPN 295 (316)
Q Consensus 218 ~~~~~~~~v~~~G~lywl~~-~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~ 295 (316)
.... ....-+|.....+. .. ...|..+|+.+.+-.. .+ ..+.. .-..++.. +|+..+... .+.+
T Consensus 322 ~v~~--~~~~~~~~~lv~~sg~~---d~~I~iwd~~~~~~v~-~l-~gH~~------~V~~l~~spdg~~l~S~s-~D~t 387 (420)
T 4gga_A 322 QVCS--ILWSPHYKELISGHGFA---QNQLVIWKYPTMAKVA-EL-KGHTS------RVLSLTMSPDGATVASAA-ADET 387 (420)
T ss_dssp CEEE--EEEETTTTEEEEEECTT---TCCEEEEETTTCCEEE-EE-CCCSS------CEEEEEECTTSSCEEEEE-TTTE
T ss_pred ceee--eeecCCCCeEEEEEecC---CCEEEEEECCCCcEEE-EE-cCCCC------CEEEEEEcCCCCEEEEEe-cCCe
Confidence 0000 01112333333322 12 3478888987653211 22 11111 22233333 666555544 4899
Q ss_pred EEEEEEeeC
Q 047073 296 LDIWIMKKY 304 (316)
Q Consensus 296 ~~vW~l~~~ 304 (316)
+.||-+.+.
T Consensus 388 vriWdv~~~ 396 (420)
T 4gga_A 388 LRLWRCFEL 396 (420)
T ss_dssp EEEECCSCS
T ss_pred EEEEECCCC
Confidence 999988654
No 109
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=33.60 E-value=1.9e+02 Score=23.39 Aligned_cols=132 Identities=8% Similarity=-0.030 Sum_probs=65.6
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.+||..+++....-.. .......+.+++.. .+ ++ .. .....+.+|+..++.-...-....
T Consensus 162 dg~v~~~d~~~~~~~~~~~~----~~~~i~~~~~~~~~-~~-l~-~~---------~~dg~i~~~d~~~~~~~~~~~~~~ 225 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQG----HTDGASCIDISNDG-TK-LW-TG---------GLDNTVRSWDLREGRQLQQHDFTS 225 (337)
T ss_dssp TSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTS-SE-EE-EE---------ETTSEEEEEETTTTEEEEEEECSS
T ss_pred CCcEEEEeCCCCceeeeeec----ccCceEEEEECCCC-CE-EE-EE---------ecCCcEEEEECCCCceEeeecCCC
Confidence 67899999888775432111 11225566666632 22 22 22 124568888887764221111110
Q ss_pred eeccCCccee--eCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCeEEEEEccCCC
Q 047073 218 VLNQPYYGAF--LNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGFLYLCDGFLEP 294 (316)
Q Consensus 218 ~~~~~~~~v~--~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~ 294 (316)
. ...+. -+|.....+.. ...|..+|+.+.....+..... ....+... +|++.++... +.
T Consensus 226 ~----v~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~-dg 287 (337)
T 1gxr_A 226 Q----IFSLGYCPTGEWLAVGME----SSNVEVLHVNKPDKYQLHLHES---------CVLSLKFAYCGKWFVSTGK-DN 287 (337)
T ss_dssp C----EEEEEECTTSSEEEEEET----TSCEEEEETTSSCEEEECCCSS---------CEEEEEECTTSSEEEEEET-TS
T ss_pred c----eEEEEECCCCCEEEEEcC----CCcEEEEECCCCCeEEEcCCcc---------ceeEEEECCCCCEEEEecC-CC
Confidence 0 01122 25555555544 3478899998876443322111 11122222 4555444443 67
Q ss_pred eEEEEEEee
Q 047073 295 NLDIWIMKK 303 (316)
Q Consensus 295 ~~~vW~l~~ 303 (316)
.+.+|-++.
T Consensus 288 ~i~~~~~~~ 296 (337)
T 1gxr_A 288 LLNAWRTPY 296 (337)
T ss_dssp EEEEEETTT
T ss_pred cEEEEECCC
Confidence 788887643
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=33.19 E-value=2.4e+02 Score=24.41 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=29.7
Q ss_pred CCeEEEEEeCCCceE-ecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCcee
Q 047073 196 KPQVEVHTIGTNTWR-NIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF 256 (316)
Q Consensus 196 ~~~~~vy~s~t~~W~-~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~ 256 (316)
...+.+|+..++.-. .+... ......-.++.++|.+...+.. ...|..+|+.+.+.
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~s~~~----dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGP-NKHQSAVTCLQFNKNFVITSSD----DGTVKLWDLKTGEF 394 (445)
T ss_dssp TSCEEEEETTTCCEEEEECST-TSCSSCEEEEEECSSEEEEEET----TSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcEEEEEccC-CCCCCCEEEEEECCCEEEEEeC----CCeEEEEECCCCce
Confidence 356777777665321 12110 0001111245567765555544 45899999988754
No 111
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=32.95 E-value=3.2e+02 Score=25.88 Aligned_cols=120 Identities=13% Similarity=0.104 Sum_probs=64.0
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCc--eEecCCCCCCCc---cCc--eEEEEEeCCCCCeEEEEEEEeecccccCCCCC
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGD--HLVLPQLKRKNV---ATR--IRGFGYNHCTNQYKVIQILSYKDQAAISSSKP 197 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~--~~~lP~~~~~~~---~~~--~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~ 197 (316)
.+|.|.+.. . ...++.+|+.||+ |..-+..+.... ... ..+..++. . +|+.. ....
T Consensus 69 ~~g~vyv~~-~--~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-~v~v~----------~~dg 131 (689)
T 1yiq_A 69 VDGVMYTTG-P--FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK---G-KVYVG----------VLDG 131 (689)
T ss_dssp ETTEEEEEC-G--GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET---T-EEEEE----------CTTS
T ss_pred ECCEEEEEc-C--CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEEC---C-EEEEE----------ccCC
Confidence 477777766 4 6789999999988 544332211000 000 11122221 1 22221 1235
Q ss_pred eEEEEEeCCC--ceEecCC--CCceeccCCcceeeCCeEEEEEecCC-CCccEEEEEeCCCc--eeeEecC
Q 047073 198 QVEVHTIGTN--TWRNIGD--LPYVLNQPYYGAFLNSALHWYAHSHD-KRTAFMCSFDLGDE--QFRQFPG 261 (316)
Q Consensus 198 ~~~vy~s~t~--~W~~~~~--~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~i~~fD~~~~--~~~~i~l 261 (316)
.+..++..|| .|+.-.. ..........++..+|.+|.-..... ..+..|.+||..|. .|+.-..
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 202 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTV 202 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEeccc
Confidence 6777888777 5876432 11111223447778999987543211 01458999999765 5766543
No 112
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=32.84 E-value=2.2e+02 Score=23.97 Aligned_cols=110 Identities=8% Similarity=-0.043 Sum_probs=54.1
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
-+.+|-.++.... .+.+.|||..+++....-. .+...+..+.+.+.... .++... ....+.+|
T Consensus 135 ~spdg~~l~sgs~--d~~i~iwd~~~~~~~~~~~----~h~~~V~~~~~~~~~~~-~l~s~s----------~D~~v~iw 197 (344)
T 4gqb_B 135 VLSSGTQAVSGSK--DICIKVWDLAQQVVLSSYR----AHAAQVTCVAASPHKDS-VFLSCS----------EDNRILLW 197 (344)
T ss_dssp ECTTSSEEEEEET--TSCEEEEETTTTEEEEEEC----CCSSCEEEEEECSSCTT-EEEEEE----------TTSCEEEE
T ss_pred ECCCCCEEEEEeC--CCeEEEEECCCCcEEEEEc----CcCCceEEEEecCCCCC-ceeeec----------cccccccc
Confidence 3446655555424 7789999999988654221 12233556666554332 222221 13568888
Q ss_pred EeCCCceEe-cCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCce
Q 047073 203 TIGTNTWRN-IGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQ 255 (316)
Q Consensus 203 ~s~t~~W~~-~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~ 255 (316)
+.+++.-.. +...... ....++.+ ++.+...+.. ...|..+|+.+.+
T Consensus 198 d~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~l~sg~~----dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 198 DTRCPKPASQIGCSAPG--YLPTSLAWHPQQSEVFVFGDE----NGTVSLVDTKSTS 248 (344)
T ss_dssp ETTSSSCEEECC----C--CCEEEEEECSSCTTEEEEEET----TSEEEEEESCC--
T ss_pred cccccceeeeeecceee--ccceeeeecCCCCcceEEecc----CCcEEEEECCCCc
Confidence 888775322 2111000 00012222 3334333333 3478889988664
No 113
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=32.72 E-value=2.9e+02 Score=25.23 Aligned_cols=67 Identities=6% Similarity=-0.000 Sum_probs=36.1
Q ss_pred CCeEEEEEecCCCCccEEEEEeCCCceeeE-ecCCCCccccCCCCccceEEEEEC-CeEEEEEccCCCeEEEEEEee
Q 047073 229 NSALHWYAHSHDKRTAFMCSFDLGDEQFRQ-FPGPPTREYEKCRPINSISVGVSG-GFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 229 ~G~lywl~~~~~~~~~~i~~fD~~~~~~~~-i~lPP~~~~~~~~~~~~~~L~~~~-G~L~lv~~~~~~~~~vW~l~~ 303 (316)
+|...+.+... ...|.++|+.+.+... ++. ....... ....+..-+ |.+.+.....+.++.||-.+.
T Consensus 334 dg~~l~va~~~---~~~v~v~D~~tg~l~~~i~~-g~~ph~g----~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 334 SHRYFMTAANN---SNKVAVIDSKDRRLSALVDV-GKTPHPG----RGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TSCEEEEEEGG---GTEEEEEETTTTEEEEEEEC-SSSBCCT----TCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCEEEEEecC---CCeEEEEECCCCeEEEeecc-CCCCCCC----CCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 67755555443 4488999999886543 343 1111100 122222223 556555543468889988764
No 114
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=31.38 E-value=1.3e+02 Score=25.03 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=34.3
Q ss_pred CCcceeeCCeEEEEEecCCCCccEEEEEeCCCcee-eEecCCCCccccCCCCccceEEEEECCeEEEEEccCCCeEEEE
Q 047073 222 PYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIW 299 (316)
Q Consensus 222 ~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~vW 299 (316)
+..++.++|...|.+... ...|..+|+++.+- ..+ +|+... ..-++..+++|+++.-. +..+-|+
T Consensus 56 ftqGL~~~~~~Ly~stG~---~g~v~~iD~~Tgkv~~~~-l~~~~F--------geGit~~g~~Ly~ltw~-~~~v~V~ 121 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGH---QGTLRQLSLESAQPVWME-RLGNIF--------AEGLASDGERLYQLTWT-EGLLFTW 121 (268)
T ss_dssp CEEEEEEETTEEEEEETT---TTEEEECCSSCSSCSEEE-ECTTCC--------EEEEEECSSCEEEEESS-SCEEEEE
T ss_pred ccceEEEECCEEEEEcCC---CCEEEEEECCCCcEEeEE-CCCCcc--------eeEEEEeCCEEEEEEcc-CCEEEEE
Confidence 334555544444444443 34699999998754 555 744322 22344556666666543 3443333
No 115
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=30.96 E-value=3.4e+02 Score=25.50 Aligned_cols=103 Identities=9% Similarity=0.082 Sum_probs=57.6
Q ss_pred eEEeeeeccCCceEEEEcCCCCceE-ecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCC
Q 047073 128 LICLHEFSYKQDIISVCNPILGDHL-VLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGT 206 (316)
Q Consensus 128 ll~~~~~~~~~~~~~v~NP~T~~~~-~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t 206 (316)
.|+++. ...+..++..+.+.. .+|-.. .....++.+|+..+ +|+... .....+..++...
T Consensus 8 ~Ll~s~----~~~I~~i~l~~~~~~~~~~~~~----~~~~~~l~~d~~~~--~lywtD---------~~~~~I~r~~~~g 68 (628)
T 4a0p_A 8 FLLFSR----RADIRRISLETNNNNVAIPLTG----VKEASALDFDVTDN--RIYWTD---------ISLKTISRAFMNG 68 (628)
T ss_dssp EEEEEE----TTEEEEEESSCTTCEEECCCCS----CSCEEEEEEETTTT--EEEEEE---------TTTTEEEEEETTS
T ss_pred EEEEEe----CCcEEEEECCCCCcceEEEcCC----CCceEEEEEECCCC--EEEEEE---------CCCCeEEEEECCC
Confidence 455555 567778887766543 344321 12367888988654 333332 2234555566554
Q ss_pred CceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCcee
Q 047073 207 NTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQF 256 (316)
Q Consensus 207 ~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~ 256 (316)
...+.+-... .....++.+ +|.|||.... ...|.++|+++..-
T Consensus 69 ~~~~~v~~~g---~~~P~GlAvD~~~~~LY~tD~~----~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 69 SALEHVVEFG---LDYPEGMAVDWLGKNLYWADTG----TNRIEVSKLDGQHR 114 (628)
T ss_dssp CSCEEEECSS---CSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSTTC
T ss_pred CCcEEEEeCC---CCCcceEEEEeCCCEEEEEECC----CCEEEEEecCCCcE
Confidence 4444332111 011224444 6899998765 46899999987643
No 116
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=30.57 E-value=2.3e+02 Score=23.31 Aligned_cols=74 Identities=12% Similarity=0.173 Sum_probs=38.6
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCC-CCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHC-TNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~-~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
.+.+|-.++.... ++.+.|||..+++...+-... .+...+..+.+.+. .+.+ ++. . .....+.+
T Consensus 21 ~s~~g~~lasgs~--D~~v~lwd~~~~~~~~~~~l~--gH~~~V~~v~~~~~~~~~~-l~s-~---------s~D~~v~i 85 (316)
T 3bg1_A 21 MDYYGTRLATCSS--DRSVKIFDVRNGGQILIADLR--GHEGPVWQVAWAHPMYGNI-LAS-C---------SYDRKVII 85 (316)
T ss_dssp ECGGGCEEEEEET--TTEEEEEEEETTEEEEEEEEE--CCSSCEEEEEECCGGGSSC-EEE-E---------ETTSCEEE
T ss_pred EcCCCCEEEEEeC--CCeEEEEEecCCCcEEEEEEc--CCCccEEEEEeCCCCCCCE-EEE-E---------ECCCEEEE
Confidence 3445655555424 778999998877543221111 12223555666432 1222 222 2 12356888
Q ss_pred EEeCCCceEe
Q 047073 202 HTIGTNTWRN 211 (316)
Q Consensus 202 y~s~t~~W~~ 211 (316)
++..++.|..
T Consensus 86 Wd~~~~~~~~ 95 (316)
T 3bg1_A 86 WREENGTWEK 95 (316)
T ss_dssp ECCSSSCCCE
T ss_pred EECCCCcceE
Confidence 8888877643
No 117
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=29.33 E-value=2.2e+02 Score=22.74 Aligned_cols=42 Identities=2% Similarity=-0.142 Sum_probs=24.0
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCC
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHC 174 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~ 174 (316)
+++|+... . .+.+.|||..+++....-.. .......+.+.+.
T Consensus 29 ~~~l~s~~-~--dg~v~vw~~~~~~~~~~~~~----~~~~v~~~~~~~~ 70 (313)
T 3odt_A 29 DSKVASVS-R--DGTVRLWSKDDQWLGTVVYT----GQGFLNSVCYDSE 70 (313)
T ss_dssp TTEEEEEE-T--TSEEEEEEESSSEEEEEEEE----CSSCEEEEEEETT
T ss_pred CCEEEEEE-c--CCcEEEEECCCCEEEEEeec----CCccEEEEEECCC
Confidence 34444443 4 78899999988765442221 1223566677664
No 118
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=29.01 E-value=2.8e+02 Score=23.97 Aligned_cols=132 Identities=7% Similarity=0.004 Sum_probs=66.4
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+.|||..+++....-.. .......+.+++ .+ ++.. .....+.+|+..++.-........
T Consensus 331 dg~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~---~~-l~s~----------s~dg~v~vwd~~~~~~~~~~~~~~ 392 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQG----HTALVGLLRLSD---KF-LVSA----------AADGSIRGWDANDYSRKFSYHHTN 392 (464)
T ss_dssp TSCEEEEETTTTEEEEEECC----CSSCEEEEEECS---SE-EEEE----------ETTSEEEEEETTTCCEEEEEECTT
T ss_pred CCcEEEEECCCCcEEEEEeC----CCCcEEEEEEcC---CE-EEEE----------eCCCcEEEEECCCCceeeeecCCC
Confidence 56788888888775432111 112244555542 22 2222 124568888887764211110000
Q ss_pred eeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEECCeEEEEEccCCCeEE
Q 047073 218 VLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLD 297 (316)
Q Consensus 218 ~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~ 297 (316)
......+..+|.+...+.+ ..|..+|+.+.+.....+.+... ....+...++.|.+.... +...-
T Consensus 393 --~~~~~~~~~~~~~l~~~~d-----g~i~iwd~~~g~~~~~~~~~~~~-------~v~~v~~~~~~l~~~~~~-~g~~~ 457 (464)
T 3v7d_B 393 --LSAITTFYVSDNILVSGSE-----NQFNIYNLRSGKLVHANILKDAD-------QIWSVNFKGKTLVAAVEK-DGQSF 457 (464)
T ss_dssp --CCCEEEEEECSSEEEEEET-----TEEEEEETTTCCEEESCTTTTCS-------EEEEEEEETTEEEEEEEE-TTEEE
T ss_pred --CccEEEEEeCCCEEEEecC-----CeEEEEECCCCcEEehhhccCCC-------cEEEEEecCCEEEEEEEe-CCeEE
Confidence 0001134456665555444 38999999988665432212211 223344444455555544 77888
Q ss_pred EEEEe
Q 047073 298 IWIMK 302 (316)
Q Consensus 298 vW~l~ 302 (316)
+|+++
T Consensus 458 i~~ld 462 (464)
T 3v7d_B 458 LEILD 462 (464)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88875
No 119
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=28.95 E-value=3.7e+02 Score=25.32 Aligned_cols=119 Identities=12% Similarity=0.116 Sum_probs=63.5
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCc--eEecCCCCCCCc---cCc--eEEEEEeCCCCCeEEEEEEEeecccccCCCCC
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGD--HLVLPQLKRKNV---ATR--IRGFGYNHCTNQYKVIQILSYKDQAAISSSKP 197 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~--~~~lP~~~~~~~---~~~--~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~ 197 (316)
.+|.|.+.. . ...++.+|+.||+ |..-+..+.... ... ..+..++. . +|+.. ....
T Consensus 65 ~~g~vyv~~-~--~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~v~v~----------~~dg 127 (668)
T 1kv9_A 65 HDGVIYTSM-S--WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWG---D-KVYVG----------TLDG 127 (668)
T ss_dssp ETTEEEEEE-G--GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEB---T-EEEEE----------CTTS
T ss_pred ECCEEEEEC-C--CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEEC---C-EEEEE----------cCCC
Confidence 477877776 4 6789999999998 544332221000 000 01112211 1 22221 1235
Q ss_pred eEEEEEeCCC--ceEecCC-CCceeccCCcceeeCCeEEEEEecCC-CCccEEEEEeCCCc--eeeEec
Q 047073 198 QVEVHTIGTN--TWRNIGD-LPYVLNQPYYGAFLNSALHWYAHSHD-KRTAFMCSFDLGDE--QFRQFP 260 (316)
Q Consensus 198 ~~~vy~s~t~--~W~~~~~-~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~i~~fD~~~~--~~~~i~ 260 (316)
.+..++..|| .|+.-.. ..........++..+|.+|.-..... .....|.+||..|. .|+.-.
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 6777887777 6876432 11111223346778999887543311 01458999998765 576543
No 120
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.72 E-value=2.9e+02 Score=24.04 Aligned_cols=158 Identities=8% Similarity=0.015 Sum_probs=76.3
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEec----CCCCCCCccCceE-EEEEeCCCCCeEEEEEEEeecccccCCC
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVL----PQLKRKNVATRIR-GFGYNHCTNQYKVIQILSYKDQAAISSS 195 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~l----P~~~~~~~~~~~~-~~~~d~~~~~~kvv~~~~~~~~~~~~~~ 195 (316)
.++..+|.|.+.+ . ...++++|+.++....+ .... .... .. ++.+++..+..-+ .. ..
T Consensus 225 av~p~~g~lyv~d-~--~~~I~~~d~~~~~~~~~~~~~~~g~--~~~~-P~~~ia~~p~~g~lyv--~d---------~~ 287 (409)
T 3hrp_A 225 ALDETEEWLYFVD-S--NKNFGRFNVKTQEVTLIKQLELSGS--LGTN-PGPYLIYYFVDSNFYM--SD---------QN 287 (409)
T ss_dssp EECTTSSEEEEEC-T--TCEEEEEETTTCCEEEEEECCCCSC--CCCS-SCCEEEEETTTTEEEE--EE---------TT
T ss_pred EEeCCCCeEEEEE-C--CCcEEEEECCCCCEEEEecccccCC--CCCC-ccccEEEeCCCCEEEE--Ee---------CC
Confidence 3344478887765 3 67899999999876654 2111 1111 12 7888875433221 11 12
Q ss_pred CCeEEEEEeCCCceEec-CCC---Cc--e-----eccCCcceee--CCeEEEEEe-cCCCCccEEEEEeCCCceeeEecC
Q 047073 196 KPQVEVHTIGTNTWRNI-GDL---PY--V-----LNQPYYGAFL--NSALHWYAH-SHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 196 ~~~~~vy~s~t~~W~~~-~~~---~~--~-----~~~~~~~v~~--~G~lywl~~-~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
...+.+|+.... -..+ ... .. . ......++.+ +|.+|+... . ...|..||+.+.....+..
T Consensus 288 ~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~----~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 288 LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK----GYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT----TCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC----CCEEEEEECCCCEEEEEeC
Confidence 334555543322 1111 000 00 0 0011123444 688777755 4 4589999977776665522
Q ss_pred CCCccc-cCC----CCc-cceEEEEE-CCeEEEEEccCCCeEEEEEE
Q 047073 262 PPTREY-EKC----RPI-NSISVGVS-GGFLYLCDGFLEPNLDIWIM 301 (316)
Q Consensus 262 PP~~~~-~~~----~~~-~~~~L~~~-~G~L~lv~~~~~~~~~vW~l 301 (316)
-+.... ... ... ....++.. +|.|++.... +..+....+
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~-n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW-GKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST-TCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC-CCeEEEEEe
Confidence 011110 000 000 22334444 4778877765 566555544
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=27.85 E-value=4e+02 Score=25.34 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=36.6
Q ss_pred ceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCC-CCeEEEEEEEeecccccCCCCCeEEEEEeC
Q 047073 127 GLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCT-NQYKVIQILSYKDQAAISSSKPQVEVHTIG 205 (316)
Q Consensus 127 Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~-~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~ 205 (316)
|-.++.... ++.+.|||..++++..+-.... .......+.+.+.. +.+-++ . .....+.+|+..
T Consensus 67 ~~~l~s~s~--Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~s--g---------s~dg~I~vwdl~ 131 (753)
T 3jro_A 67 GTILASCSY--DGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLV--A---------SSDGKVSVVEFK 131 (753)
T ss_dssp CSEEEEEET--TSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEE--E---------ETTSEEEEEECC
T ss_pred CCEEEEEeC--CCeEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEE--E---------eCCCcEEEEEee
Confidence 544444324 7889999999986443332211 22336667776653 333222 2 124568888877
Q ss_pred CC
Q 047073 206 TN 207 (316)
Q Consensus 206 t~ 207 (316)
++
T Consensus 132 ~~ 133 (753)
T 3jro_A 132 EN 133 (753)
T ss_dssp SS
T ss_pred cC
Confidence 65
No 122
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.78 E-value=2.8e+02 Score=23.56 Aligned_cols=138 Identities=9% Similarity=0.090 Sum_probs=68.4
Q ss_pred CceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCC
Q 047073 138 QDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~ 216 (316)
.+.+.+||..+++... +... ......+.+.+.... ++.... + .....+.+|+..++.-...-...
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~--ll~~~~---g----s~d~~i~i~d~~~~~~~~~~~~~ 303 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNH-----NAAVKAVAWCPWQSN--LLATGG---G----TMDKQIHFWNAATGARVNTVDAG 303 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCC-----SSCCCEEEECTTSTT--EEEEEC---C----TTTCEEEEEETTTCCEEEEEECS
T ss_pred CCeEEEccCCCCCccEEecCC-----cceEEEEEECCCCCC--EEEEec---C----CCCCEEEEEECCCCCEEEEEeCC
Confidence 5678888877766443 2211 112345566554332 222211 0 23567888888776432211111
Q ss_pred ceeccCCcceee--CCeEEEEEe-cCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceEEEEE-CCeEEEEEcc
Q 047073 217 YVLNQPYYGAFL--NSALHWYAH-SHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSISVGVS-GGFLYLCDGF 291 (316)
Q Consensus 217 ~~~~~~~~~v~~--~G~lywl~~-~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~L~~~-~G~L~lv~~~ 291 (316)
.. -..+.+ +|.....+. .. ...|..||+.+...... .+ +.+.. .-..+... +|++.+....
T Consensus 304 ~~----v~~~~~s~~~~~l~~~~g~~---dg~i~v~~~~~~~~~~~~~~-~~h~~------~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 304 SQ----VTSLIWSPHSKEIMSTHGFP---DNNLSIWSYSSSGLTKQVDI-PAHDT------RVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp SC----EEEEEECSSSSEEEEEECTT---TCEEEEEEEETTEEEEEEEE-ECCSS------CCCEEEECTTSSEEEEECT
T ss_pred Cc----EEEEEECCCCCeEEEEeecC---CCcEEEEecCCccceeEEEe-cCCCC------CEEEEEECCCCCEEEEEeC
Confidence 00 112222 555444432 12 35899999888655443 33 22221 12223332 5666555554
Q ss_pred CCCeEEEEEEeeC
Q 047073 292 LEPNLDIWIMKKY 304 (316)
Q Consensus 292 ~~~~~~vW~l~~~ 304 (316)
+..+.+|.+.+.
T Consensus 370 -dg~i~iw~~~~~ 381 (401)
T 4aez_A 370 -DENLKFWRVYDG 381 (401)
T ss_dssp -TSEEEEEECCC-
T ss_pred -CCcEEEEECCCC
Confidence 789999998753
No 123
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=27.31 E-value=87 Score=27.12 Aligned_cols=55 Identities=4% Similarity=-0.106 Sum_probs=32.6
Q ss_pred CCeEEEEEeCCCceEecCCCCc-----eeccCCccee-------eCCeEEEEEecCCCCccEEEEEeCCCce
Q 047073 196 KPQVEVHTIGTNTWRNIGDLPY-----VLNQPYYGAF-------LNSALHWYAHSHDKRTAFMCSFDLGDEQ 255 (316)
Q Consensus 196 ~~~~~vy~s~t~~W~~~~~~~~-----~~~~~~~~v~-------~~G~lywl~~~~~~~~~~i~~fD~~~~~ 255 (316)
...+..|+..+|.|+.--..+. +......+|. .+|.+|.-...+ .+.++|+.+.+
T Consensus 66 dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g-----~l~ald~~tG~ 132 (339)
T 2be1_A 66 DGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT-----IMYTINMLNGE 132 (339)
T ss_dssp TTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEE-----EEEEEETTTCC
T ss_pred CCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCC-----EEEEEECCCCc
Confidence 4567777877776653111111 1111344566 789999887775 89999998763
No 124
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=27.16 E-value=2.7e+02 Score=25.75 Aligned_cols=109 Identities=6% Similarity=-0.070 Sum_probs=58.0
Q ss_pred CceEEeeeeccCCceEEEEcCCCCceE-ecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 126 NGLICLHEFSYKQDIISVCNPILGDHL-VLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 126 ~Gll~~~~~~~~~~~~~v~NP~T~~~~-~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
++++.+.... ...+.|+|+.|++.. .||.... ..++.+++. +.|-.+. . . ...+.+|+.
T Consensus 166 ~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~------p~~v~~SpD-Gr~lyv~-~---~-------dg~V~viD~ 225 (567)
T 1qks_A 166 ENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYA------VHISRLSAS-GRYLFVI-G---R-------DGKVNMIDL 225 (567)
T ss_dssp GGEEEEEETT--TTEEEEEETTTCCEEEEEECSSC------EEEEEECTT-SCEEEEE-E---T-------TSEEEEEET
T ss_pred CceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCC------ccceEECCC-CCEEEEE-c---C-------CCeEEEEEC
Confidence 4455555533 789999999999865 4554322 346666664 3443332 1 1 346888887
Q ss_pred C--CCceEecCCCCceeccCCcceee------CCeEEEEEecCCCCccEEEEEeCCCcee-eEecC
Q 047073 205 G--TNTWRNIGDLPYVLNQPYYGAFL------NSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPG 261 (316)
Q Consensus 205 ~--t~~W~~~~~~~~~~~~~~~~v~~------~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~l 261 (316)
. ++ +.+...+.... ..++.+ +|..-+.+... ...+.+||..+.+- ..+++
T Consensus 226 ~~~t~--~~v~~i~~G~~--P~~ia~s~~~~pDGk~l~v~n~~---~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 226 WMKEP--TTVAEIKIGSE--ARSIETSKMEGWEDKYAIAGAYW---PPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp TSSSC--CEEEEEECCSE--EEEEEECCSTTCTTTEEEEEEEE---TTEEEEEETTTCCEEEEEEC
T ss_pred CCCCC--cEeEEEecCCC--CceeEEccccCCCCCEEEEEEcc---CCeEEEEECCCCcEEEEEec
Confidence 4 43 22211111100 112222 57655555543 45889999877533 33444
No 125
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=26.83 E-value=3.3e+02 Score=24.19 Aligned_cols=115 Identities=12% Similarity=0.151 Sum_probs=57.1
Q ss_pred CeEEEEEeCCC--ceEecCCCCc----e---e--ccCCcceeeC-----CeEEEEEe-cCC-CCccEEEEE-eCCCceee
Q 047073 197 PQVEVHTIGTN--TWRNIGDLPY----V---L--NQPYYGAFLN-----SALHWYAH-SHD-KRTAFMCSF-DLGDEQFR 257 (316)
Q Consensus 197 ~~~~vy~s~t~--~W~~~~~~~~----~---~--~~~~~~v~~~-----G~lywl~~-~~~-~~~~~i~~f-D~~~~~~~ 257 (316)
..+.++.|.++ +|.....++. . . .....++.+. |.++.-.. ... +.....+.+ |=...+|+
T Consensus 187 ~~~~~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~~g~~~~~v~~S~D~G~tW~ 266 (449)
T 2bf6_A 187 SYINLVYSDDDGKTWSEPQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNEKGKQSSAVIYSDDSGKNWT 266 (449)
T ss_dssp CEEEEEEESSTTSSCCCCEECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECTTCCEEEEEEEESSTTSSCE
T ss_pred cEEEEEEEcCCCccCCCCccCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcCCCCEEEEEEEECCCCCcee
Confidence 45667777654 8976322111 0 0 1122345443 77776433 211 111223333 33467999
Q ss_pred EecCCCCcc----c---------cCCCCccceEEEEE-CCeEEEEEccCCCeEEEEEEeeCCCCCCeeeE
Q 047073 258 QFPGPPTRE----Y---------EKCRPINSISVGVS-GGFLYLCDGFLEPNLDIWIMKKYGVKESWTKE 313 (316)
Q Consensus 258 ~i~lPP~~~----~---------~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~vW~l~~~~~~~~W~~~ 313 (316)
....|+... . ..........++++ +|+|.++....+..+.+..-.|. .+.|+..
T Consensus 267 ~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~~dG~l~~~~R~~~g~~~v~~S~D~--G~TWs~~ 334 (449)
T 2bf6_A 267 IGESPNDNRKLENGKIINSKTLSDDAPQLTECQVVEMPNGQLKLFMRNLSGYLNIATSFDG--GATWDET 334 (449)
T ss_dssp ECCCTTTTEECTTSCEECTTTCCCSTTCEEEEEEEECTTSCEEEEEEESSSEEEEEEESST--TSCCCSC
T ss_pred ECCccCcccccccccccccccccccCCCCCCCEEEEecCCEEEEEEEeCCCCEEEEEECCC--CccccCc
Confidence 886633321 0 00001134457787 58988877654555555555553 4579863
No 126
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=26.56 E-value=2.7e+02 Score=22.92 Aligned_cols=21 Identities=14% Similarity=0.333 Sum_probs=15.1
Q ss_pred CCeEEEEEccCCCeEEEEEEee
Q 047073 282 GGFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 282 ~G~L~lv~~~~~~~~~vW~l~~ 303 (316)
+|++.++... +..+.||.++.
T Consensus 267 ~g~~l~~~~~-dg~i~iw~~~~ 287 (379)
T 3jrp_A 267 SGNVLALSGG-DNKVTLWKENL 287 (379)
T ss_dssp SSCCEEEEES-SSSEEEEEEEE
T ss_pred CCCEEEEecC-CCcEEEEeCCC
Confidence 5665555554 78999999975
No 127
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=26.33 E-value=4.2e+02 Score=25.04 Aligned_cols=120 Identities=13% Similarity=0.146 Sum_probs=64.2
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCc--eEecCCCCCCCc---c--CceEEEEEeCCCCCeEEEEEEEeecccccCCCCC
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGD--HLVLPQLKRKNV---A--TRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKP 197 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~--~~~lP~~~~~~~---~--~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~ 197 (316)
.+|.|.+.. . ...++.+|+.||+ |..-+..+.... . ....+..++. . +|+.. ....
T Consensus 76 ~~g~vyv~~-~--~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~---~-~v~v~----------~~dg 138 (677)
T 1kb0_A 76 VDGIMYVSA-S--WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK---G-KVYVG----------AWDG 138 (677)
T ss_dssp ETTEEEEEC-G--GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET---T-EEEEE----------CTTS
T ss_pred ECCEEEEEC-C--CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC---C-EEEEE----------cCCC
Confidence 478887776 4 6789999999998 444332211000 0 0011222222 1 22221 1235
Q ss_pred eEEEEEeCCC--ceEecCC--CCceeccCCcceeeCCeEEEEEecCCC-CccEEEEEeCCCc--eeeEecC
Q 047073 198 QVEVHTIGTN--TWRNIGD--LPYVLNQPYYGAFLNSALHWYAHSHDK-RTAFMCSFDLGDE--QFRQFPG 261 (316)
Q Consensus 198 ~~~vy~s~t~--~W~~~~~--~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~i~~fD~~~~--~~~~i~l 261 (316)
.+..++..|| .|+.-.. ..........++..+|.+|.-...... ....|.+||..|. .|+.-..
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 209 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSV 209 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccC
Confidence 5777787777 5876422 111111233467789998876543210 1458999998765 5766544
No 128
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=26.11 E-value=3.4e+02 Score=23.90 Aligned_cols=146 Identities=11% Similarity=0.092 Sum_probs=76.1
Q ss_pred eec-cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 122 LSS-CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 122 ~~s-~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
++. .+|.|.+.+ . ...+.++|+.+++...+-.. .....++.+|+..+ .|+...+... .....+.
T Consensus 144 vdp~~~g~Lyv~d-~--~~~I~~id~~~~~v~~~~~~-----~~~P~~ia~d~~G~--~lyvad~~~~-----~~~~~v~ 208 (430)
T 3tc9_A 144 FDPKNHNHLYLVG-E--QHPTRLIDFEKEYVSTVYSG-----LSKVRTICWTHEAD--SMIITNDQNN-----NDRPNNY 208 (430)
T ss_dssp EETTEEEEEEEEE-B--TEEEEEEETTTTEEEEEECC-----CSCEEEEEECTTSS--EEEEEECCSC-----TTSEEEE
T ss_pred ECCCCCCeEEEEe-C--CCcEEEEECCCCEEEEEecC-----CCCcceEEEeCCCC--EEEEEeCCCC-----cccceEE
Confidence 344 468887777 3 27899999999876655331 12256777776543 2333332111 0112333
Q ss_pred EEEeCCCceE---ecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCcee-eEecCCCCccccCCCCc
Q 047073 201 VHTIGTNTWR---NIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPI 273 (316)
Q Consensus 201 vy~s~t~~W~---~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~ 273 (316)
+++. .+.|. .+.. .....++.+ +|.+|+.... ...|..||+++... ....+ +...
T Consensus 209 ~~~~-~g~~~~~~~l~~-----~~~p~giavdp~~g~lyv~d~~----~~~V~~~~~~~~~~~~~~~~-~~~~------- 270 (430)
T 3tc9_A 209 ILTR-ESGFKVITELTK-----GQNCNGAETHPINGELYFNSWN----AGQVFRYDFTTQETTPLFTI-QDSG------- 270 (430)
T ss_dssp EEEG-GGTSCSEEEEEE-----CSSCCCEEECTTTCCEEEEETT----TTEEEEEETTTTEEEEEEEC-SSSS-------
T ss_pred EEeC-CCceeeeeeecc-----CCCceEEEEeCCCCEEEEEECC----CCEEEEEECCCCcEEEEEEc-CCCC-------
Confidence 3443 33342 2211 112224444 6889887765 45899999998766 33344 2211
Q ss_pred cceEEEEE-CCe-EEEEEccCCCeEEEEEE
Q 047073 274 NSISVGVS-GGF-LYLCDGFLEPNLDIWIM 301 (316)
Q Consensus 274 ~~~~L~~~-~G~-L~lv~~~~~~~~~vW~l 301 (316)
....++.. +|+ |+++... ...+.++..
T Consensus 271 ~P~gia~~pdG~~lyv~d~~-~~~I~~~~~ 299 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVN-QHYILRSDY 299 (430)
T ss_dssp CCEEEEECTTSSEEEEEETT-TTEEEEEEE
T ss_pred cceeEEEcCCCCEEEEEECC-CCEEEEEeC
Confidence 22233433 455 6666554 444444433
No 129
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=25.79 E-value=4.3e+02 Score=25.04 Aligned_cols=113 Identities=10% Similarity=0.015 Sum_probs=56.3
Q ss_pred eeeccCceEEe--eeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCe
Q 047073 121 LLSSCNGLICL--HEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQ 198 (316)
Q Consensus 121 ~~~s~~Gll~~--~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~ 198 (316)
+....+|-|-+ .. ..-++.+||.+++...+..... ........+..|.. +. +.+.. ...
T Consensus 477 i~~d~~g~lWi~~~t----~~Gl~~~d~~~~~~~~~~~~~~-~~~~~~~~i~~d~~-g~---lWigt----------~~G 537 (758)
T 3ott_A 477 IIPDNEGNVWVLLYN----NKGIDKINPRTREVTKLFADEL-TGEKSPNYLLCDED-GL---LWVGF----------HGG 537 (758)
T ss_dssp EEECTTSCEEEEETT----CSSEEEEETTTTEEEEECTTTS-CGGGCEEEEEECTT-SC---EEEEE----------TTE
T ss_pred EEEcCCCCEEEEccC----CCCcEEEeCCCCceEEecCCCc-CCCcccceEEECCC-CC---EEEEe----------cCc
Confidence 33444666655 33 4568889999998887643211 11112333333321 11 11221 234
Q ss_pred EEEEEeCCCceEecC--CCCceeccCCcc-eeeCCeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 199 VEVHTIGTNTWRNIG--DLPYVLNQPYYG-AFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 199 ~~vy~s~t~~W~~~~--~~~~~~~~~~~~-v~~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
+..|+..++.++... .++... ..+ +.-+|.+ |++... .|..||+.+.++....+
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~~~---i~~i~~~~g~l-Wi~t~~-----Gl~~~~~~~~~~~~~~~ 594 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSNNE---ILSMTCVKNSI-WVSTTN-----GLWIIDRKTMDARQQNM 594 (758)
T ss_dssp EEEECC--CCCCBCCCCC---CC---EEEEEEETTEE-EEEESS-----CEEEEETTTCCEEEC--
T ss_pred eEEEecCCCceEEecccCCCccc---eEEEEECCCCE-EEECCC-----CeEEEcCCCceeEEecC
Confidence 677777777665542 222110 011 2235654 555543 69999999999887766
No 130
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=25.63 E-value=1.3e+02 Score=22.39 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=49.3
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCc--eEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATR--IRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~--~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
-|=+|++.+....-+.+|.+||.+.+...|-.......... -..+-||....+|+-|-.. .....+.-+
T Consensus 54 ~hFlILfrd~~~qfRalY~~~~~~e~~~Ki~G~GP~~i~~~mV~~~~KYdSg~K~F~~i~sk---------~~s~tvDAv 124 (141)
T 1ugj_A 54 NHFLILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPAK---------TMSMSVDAF 124 (141)
T ss_dssp SCEEEEESSSSCSEEEEEEECTTSSCEEEEESSSCSEECTTTEEEEEEEETTTTEEEECSSS---------SCCTTCSEE
T ss_pred CeEEEEEecCCCceEEEEEEeCCCceEEEEECCCcCcccHHHHHHHhccCCCCceecccCcc---------ccceeEEEE
Confidence 34456666633336689999999998877665422122222 4566788888888877421 345566667
Q ss_pred EeCCCceEe
Q 047073 203 TIGTNTWRN 211 (316)
Q Consensus 203 ~s~t~~W~~ 211 (316)
+....-|..
T Consensus 125 tl~~~~w~~ 133 (141)
T 1ugj_A 125 TIQGHLWQS 133 (141)
T ss_dssp EECSTTTSC
T ss_pred EEhhHhhcC
Confidence 777777754
No 131
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=25.32 E-value=2.6e+02 Score=22.23 Aligned_cols=147 Identities=16% Similarity=0.074 Sum_probs=0.0
Q ss_pred eeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEE
Q 047073 121 LLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 121 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
.++..+|.|.+.+.. ..++.++|+-.+....+-.... ....++.+|+..+..-+.-.. .....+.
T Consensus 85 a~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~~----~~P~~i~vd~~~g~lyv~~~~---------~~~~~I~ 149 (267)
T 1npe_A 85 ALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTGL----VNPRGIVTDPVRGNLYWTDWN---------RDNPKIE 149 (267)
T ss_dssp EEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSC----SSEEEEEEETTTTEEEEEECC---------SSSCEEE
T ss_pred EEEecCCeEEEEECC--CCEEEEEEcCCCCEEEEEECCC----CCccEEEEeeCCCEEEEEECC---------CCCcEEE
Q ss_pred EEEeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceE
Q 047073 201 VHTIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSIS 277 (316)
Q Consensus 201 vy~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~ 277 (316)
+++.....-+.+..... ....++.+ +|.+||.... ...|.+||+++..-..+ + +... ....
T Consensus 150 ~~~~dg~~~~~~~~~~~---~~P~gia~d~~~~~lyv~d~~----~~~I~~~~~~g~~~~~~-~-~~~~-------~P~g 213 (267)
T 1npe_A 150 TSHMDGTNRRILAQDNL---GLPNGLTFDAFSSQLCWVDAG----THRAECLNPAQPGRRKV-L-EGLQ-------YPFA 213 (267)
T ss_dssp EEETTSCCCEEEECTTC---SCEEEEEEETTTTEEEEEETT----TTEEEEEETTEEEEEEE-E-ECCC-------SEEE
T ss_pred EEecCCCCcEEEEECCC---CCCcEEEEcCCCCEEEEEECC----CCEEEEEecCCCceEEE-e-cCCC-------CceE
Q ss_pred EEEECCeEEEEEccCCCeEEEE
Q 047073 278 VGVSGGFLYLCDGFLEPNLDIW 299 (316)
Q Consensus 278 L~~~~G~L~lv~~~~~~~~~vW 299 (316)
++.-+|.|++.... ...+.+.
T Consensus 214 i~~d~~~lyva~~~-~~~v~~~ 234 (267)
T 1npe_A 214 VTSYGKNLYYTDWK-TNSVIAM 234 (267)
T ss_dssp EEEETTEEEEEETT-TTEEEEE
T ss_pred EEEeCCEEEEEECC-CCeEEEE
No 132
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=25.31 E-value=2.6e+02 Score=22.90 Aligned_cols=66 Identities=11% Similarity=0.100 Sum_probs=40.4
Q ss_pred CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEE-ECCeEEEEEccCCCeEEEEEEe
Q 047073 229 NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGV-SGGFLYLCDGFLEPNLDIWIMK 302 (316)
Q Consensus 229 ~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~-~~G~L~lv~~~~~~~~~vW~l~ 302 (316)
.|.+|-++.. ...|+.+|...+.-+.++|++.............-++. -+|.|++++.- + -+|+.+
T Consensus 184 tg~lliLS~~----s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~--n--~~y~f~ 250 (255)
T 3qqz_A 184 KNTLLVLSHE----SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP--N--RFYRFT 250 (255)
T ss_dssp TTEEEEEETT----TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT--T--EEEEEE
T ss_pred CCeEEEEECC----CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC--c--eEEEEE
Confidence 4778888877 56999999999988888885433221100001222333 26788888653 2 556654
No 133
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=25.13 E-value=3e+02 Score=23.02 Aligned_cols=137 Identities=14% Similarity=0.065 Sum_probs=70.9
Q ss_pred eeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEE
Q 047073 122 LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEV 201 (316)
Q Consensus 122 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~v 201 (316)
++..+|.|.+.+.. ...+.++++-.+....+.... .....++.+|+..+. ++.... .....++.
T Consensus 86 vd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~----~~~P~giavdp~~g~--ly~td~--------~~~~~I~r 149 (318)
T 3sov_A 86 CDWLGEKLYWTDSE--TNRIEVSNLDGSLRKVLFWQE----LDQPRAIALDPSSGF--MYWTDW--------GEVPKIER 149 (318)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS----CSSEEEEEEEGGGTE--EEEEEC--------SSSCEEEE
T ss_pred EEcCCCeEEEEECC--CCEEEEEECCCCcEEEEEeCC----CCCccEEEEeCCCCE--EEEEec--------CCCCEEEE
Confidence 34456777776633 668888888766554443211 122568888876442 222211 11345666
Q ss_pred EEeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCceeeEe-cCCCCccccCCCCccceE
Q 047073 202 HTIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQFRQF-PGPPTREYEKCRPINSIS 277 (316)
Q Consensus 202 y~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i-~lPP~~~~~~~~~~~~~~ 277 (316)
++.....=+.+.... ....+++.+ +|.|||.... ...|.++|++...-+.+ .. . . . ....
T Consensus 150 ~~~dG~~~~~~~~~~---l~~Pnglavd~~~~~lY~aD~~----~~~I~~~d~dG~~~~~~~~~--~-~--~----~P~g 213 (318)
T 3sov_A 150 AGMDGSSRFIIINSE---IYWPNGLTLDYEEQKLYWADAK----LNFIHKSNLDGTNRQAVVKG--S-L--P----HPFA 213 (318)
T ss_dssp EETTSCSCEEEECSS---CSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEECS--C-C--S----CEEE
T ss_pred EEcCCCCeEEEEECC---CCCccEEEEeccCCEEEEEECC----CCEEEEEcCCCCceEEEecC--C-C--C----CceE
Confidence 665432212221100 011124444 6899999766 56899999986433333 21 0 1 0 2334
Q ss_pred EEEECCeEEEEEc
Q 047073 278 VGVSGGFLYLCDG 290 (316)
Q Consensus 278 L~~~~G~L~lv~~ 290 (316)
++..++.|+....
T Consensus 214 lav~~~~lywtd~ 226 (318)
T 3sov_A 214 LTLFEDILYWTDW 226 (318)
T ss_dssp EEEETTEEEEEET
T ss_pred EEEeCCEEEEEec
Confidence 5556777777654
No 134
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=24.90 E-value=2.9e+02 Score=22.64 Aligned_cols=108 Identities=9% Similarity=0.027 Sum_probs=56.6
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEe
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTI 204 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s 204 (316)
.+|-|.+.+.. ..+++++||.++....++... ...++.+++.. . ++..... .....+..|+.
T Consensus 41 ~~g~lyv~d~~--~~~I~~~d~~g~~~~~~~~~~------~p~gia~~~dG-~--l~vad~~-------~~~~~v~~~d~ 102 (306)
T 2p4o_A 41 PDGTIFVTNHE--VGEIVSITPDGNQQIHATVEG------KVSGLAFTSNG-D--LVATGWN-------ADSIPVVSLVK 102 (306)
T ss_dssp TTSCEEEEETT--TTEEEEECTTCCEEEEEECSS------EEEEEEECTTS-C--EEEEEEC-------TTSCEEEEEEC
T ss_pred CCCCEEEEeCC--CCeEEEECCCCceEEEEeCCC------CceeEEEcCCC-c--EEEEecc-------CCcceEEEEcC
Confidence 36777776633 678999999876544433221 25577777653 2 3332221 11234666777
Q ss_pred CCCceEecCCCCceeccCCcceeeCCeEEEEEecCCCCccEEEEEeCCCc
Q 047073 205 GTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE 254 (316)
Q Consensus 205 ~t~~W~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~ 254 (316)
.++..+.+...+.........+..+|.+|..... ...|..+|..+.
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~----~g~i~~~d~~~~ 148 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY----RGAIWLIDVVQP 148 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT----TTEEEEEETTTT
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECC----CCeEEEEeCCCC
Confidence 7777655432221100000012334555654332 348999998864
No 135
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=24.06 E-value=3.2e+02 Score=22.89 Aligned_cols=108 Identities=11% Similarity=0.054 Sum_probs=53.5
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCce--EecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDH--LVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~--~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
.+|.|...+.. ...++.+++.++.. ..+... .....++.+|...+. ++... .....++++
T Consensus 45 ~~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~~~~-----l~~p~glavd~~~g~--ly~~d---------~~~~~I~~~ 106 (318)
T 3sov_A 45 SHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSG-----LLSPDGLACDWLGEK--LYWTD---------SETNRIEVS 106 (318)
T ss_dssp GGTEEEEEETT--TTEEEEEETTSSSCCCEEEEEC-----CSCCCEEEEETTTTE--EEEEE---------TTTTEEEEE
T ss_pred CCCEEEEEECC--CCcEEEEEccCCCceEEEEcCC-----CCCccEEEEEcCCCe--EEEEE---------CCCCEEEEE
Confidence 34556555522 55666666665521 111110 011346777765443 22221 224567777
Q ss_pred EeCCCceEecCCCCceeccCCcceee---CCeEEEEEecCCCCccEEEEEeCCCcee
Q 047073 203 TIGTNTWRNIGDLPYVLNQPYYGAFL---NSALHWYAHSHDKRTAFMCSFDLGDEQF 256 (316)
Q Consensus 203 ~s~t~~W~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~i~~fD~~~~~~ 256 (316)
+.....-+.+.... .....++.+ +|.|||..... ...|.++|++...-
T Consensus 107 ~~dG~~~~~l~~~~---~~~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 107 NLDGSLRKVLFWQE---LDQPRAIALDPSSGFMYWTDWGE---VPKIERAGMDGSSR 157 (318)
T ss_dssp ETTSCSCEEEECSS---CSSEEEEEEEGGGTEEEEEECSS---SCEEEEEETTSCSC
T ss_pred ECCCCcEEEEEeCC---CCCccEEEEeCCCCEEEEEecCC---CCEEEEEEcCCCCe
Confidence 76544322221100 011123434 58999987543 35899999986543
No 136
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=23.96 E-value=2.5e+02 Score=23.00 Aligned_cols=28 Identities=4% Similarity=0.006 Sum_probs=20.3
Q ss_pred eCCeEEEEEecCCCCccEEEEEeCCCceeeEe
Q 047073 228 LNSALHWYAHSHDKRTAFMCSFDLGDEQFRQF 259 (316)
Q Consensus 228 ~~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i 259 (316)
-+|.+||.... ...|..||+++.++..+
T Consensus 54 ~~g~l~~~~~~----~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 54 RQGQLFLLDVF----EGNIFKINPETKEIKRP 81 (333)
T ss_dssp TTSCEEEEETT----TCEEEEECTTTCCEEEE
T ss_pred CCCCEEEEECC----CCEEEEEeCCCCcEEEE
Confidence 36788777654 34789999988877655
No 137
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=23.84 E-value=3.4e+02 Score=23.09 Aligned_cols=136 Identities=6% Similarity=0.006 Sum_probs=67.7
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecCCCCc
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPY 217 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 217 (316)
.+.+++||+.+++....-..+ .....+.+++.. ++-++. . .....+.+|+..++.-...-...
T Consensus 282 dg~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~g-~~l~~~-~---------~~~~~v~v~d~~~~~~~~~~~~~- 344 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTIGPP-----GNKRHIVSGNTE-NKIYVS-D---------MCCSKIEVYDLKEKKVQKSIPVF- 344 (433)
T ss_dssp CEEEEEEETTTTEEEEEEEEE-----ECEEEEEECSST-TEEEEE-E---------TTTTEEEEEETTTTEEEEEEECS-
T ss_pred CCeEEEEECCCCcEEeeccCC-----CCcceEEECCCC-CEEEEE-e---------cCCCEEEEEECCCCcEEEEecCC-
Confidence 457888888887654432111 123455555532 232222 1 23467888888776432111100
Q ss_pred eeccCCccee--eCCeEEEEEecCCCC-----------ccEEEEEeCCCceeeE-ecCCCCccccCCCCccceEEEEE-C
Q 047073 218 VLNQPYYGAF--LNSALHWYAHSHDKR-----------TAFMCSFDLGDEQFRQ-FPGPPTREYEKCRPINSISVGVS-G 282 (316)
Q Consensus 218 ~~~~~~~~v~--~~G~lywl~~~~~~~-----------~~~i~~fD~~~~~~~~-i~lPP~~~~~~~~~~~~~~L~~~-~ 282 (316)
....++. -+|...+.+..+.+. ...|..+|+.+.+... ++. .. ....+... +
T Consensus 345 ---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~---------~~~~~~~s~d 411 (433)
T 3bws_A 345 ---DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GN---------QPTGLDVSPD 411 (433)
T ss_dssp ---SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SS---------SEEEEEECTT
T ss_pred ---CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CC---------CCceEEEcCC
Confidence 0011222 256655554442110 2389999998765433 232 11 11223332 5
Q ss_pred CeEEEEEccCCCeEEEEEEee
Q 047073 283 GFLYLCDGFLEPNLDIWIMKK 303 (316)
Q Consensus 283 G~L~lv~~~~~~~~~vW~l~~ 303 (316)
|+..++....+..+.||.+++
T Consensus 412 g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 412 NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEecC
Confidence 665555543478999998863
No 138
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=23.77 E-value=3.1e+02 Score=22.60 Aligned_cols=57 Identities=9% Similarity=-0.141 Sum_probs=32.7
Q ss_pred CeEEEEEec-CCCCccEEEEEeCCCcee-eEecCCCCccccCCCCccceEEEEECCeEEEEEccCCCeEEE
Q 047073 230 SALHWYAHS-HDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDI 298 (316)
Q Consensus 230 G~lywl~~~-~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~~~~~v 298 (316)
|.+|--+.. + ...|.++|+++.+- ..+++|+ .. ...-++..+++|++.... ++.+.|
T Consensus 32 g~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~-~~-------fgeGi~~~g~~lyv~t~~-~~~v~v 90 (266)
T 2iwa_A 32 DTLFESTGLYG---RSSVRQVALQTGKVENIHKMDD-SY-------FGEGLTLLNEKLYQVVWL-KNIGFI 90 (266)
T ss_dssp TEEEEEECSTT---TCEEEEEETTTCCEEEEEECCT-TC-------CEEEEEEETTEEEEEETT-CSEEEE
T ss_pred CeEEEECCCCC---CCEEEEEECCCCCEEEEEecCC-Cc-------ceEEEEEeCCEEEEEEec-CCEEEE
Confidence 666665542 2 45899999987754 5567733 22 222344456677777653 444333
No 139
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=23.63 E-value=3.2e+02 Score=22.70 Aligned_cols=26 Identities=4% Similarity=-0.265 Sum_probs=11.4
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCc
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGD 150 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~ 150 (316)
-+.+|-+++.... .+.+.|||..+++
T Consensus 63 ~s~~~~~l~s~s~--d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 63 WAPKSNRIVTCSQ--DRNAYVYEKRPDG 88 (377)
T ss_dssp ECTTTCCEEEEET--TSSEEEC------
T ss_pred EeCCCCEEEEEeC--CCeEEEEEcCCCC
Confidence 3444544333323 6789999999887
No 140
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=23.28 E-value=3.6e+02 Score=25.41 Aligned_cols=31 Identities=10% Similarity=-0.009 Sum_probs=23.7
Q ss_pred CcceeeCCeEEEEEecCCCCccEEEEEeCCCc--eeeE
Q 047073 223 YYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE--QFRQ 258 (316)
Q Consensus 223 ~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~--~~~~ 258 (316)
..++..+|.+|.....+ .|.++|.++. .|+.
T Consensus 60 ~~P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~ 92 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS-----RVIAVDAASGKELWRY 92 (668)
T ss_dssp CCCEEETTEEEEEEGGG-----EEEEEETTTCCEEEEE
T ss_pred cCCEEECCEEEEECCCC-----eEEEEECCCChhceEE
Confidence 44788999999987653 8999998654 6664
No 141
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=22.85 E-value=3e+02 Score=22.10 Aligned_cols=107 Identities=14% Similarity=0.040 Sum_probs=55.0
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEec-CCCC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNI-GDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~-~~~~ 216 (316)
...++++||.+++...+..+..........++.+++..+. +..... ...+.+|+.. +..+.+ ....
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~--l~v~~~----------~~~l~~~d~~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ--LFVADM----------RLGLLVVQTD-GTFEEIAKKDS 111 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE--EEEEET----------TTEEEEEETT-SCEEECCSBCT
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc--EEEEEC----------CCCEEEEeCC-CCEEEEEeccC
Confidence 6789999999998876543111011123567777664232 222211 2367788877 766655 3211
Q ss_pred ce-eccCCcceee--CCeEEEEEecCC----------C-CccEEEEEeCCCceeeE
Q 047073 217 YV-LNQPYYGAFL--NSALHWYAHSHD----------K-RTAFMCSFDLGDEQFRQ 258 (316)
Q Consensus 217 ~~-~~~~~~~v~~--~G~lywl~~~~~----------~-~~~~i~~fD~~~~~~~~ 258 (316)
.. .......+.+ +|.+|....... . ....|..+|.+ .++..
T Consensus 112 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 10 0111223333 677766554310 0 02479999987 44443
No 142
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.78 E-value=60 Score=21.19 Aligned_cols=15 Identities=13% Similarity=0.184 Sum_probs=13.3
Q ss_pred CceEEEEcCCCCceE
Q 047073 138 QDIISVCNPILGDHL 152 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~ 152 (316)
.++.|.+||.|++-+
T Consensus 29 dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 29 DERVFFYNPTTRLSM 43 (73)
T ss_dssp SSCEEEEETTTTEEC
T ss_pred CCCEEEecCccccee
Confidence 889999999999844
No 143
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=22.77 E-value=4.7e+02 Score=24.35 Aligned_cols=100 Identities=10% Similarity=0.070 Sum_probs=47.8
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEe-cCCCC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRN-IGDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~-~~~~~ 216 (316)
++.+.|||...+....+..... .+...+..+.+.+....-.++... ....+.+|+..++.-.. +....
T Consensus 493 D~~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s----------~d~~v~vwd~~~~~~~~~~~~h~ 561 (694)
T 3dm0_A 493 DRTIKLWNTLGECKYTISEGGE-GHRDWVSCVRFSPNTLQPTIVSAS----------WDKTVKVWNLSNCKLRSTLAGHT 561 (694)
T ss_dssp TSCEEEECTTSCEEEEECSSTT-SCSSCEEEEEECSCSSSCEEEEEE----------TTSCEEEEETTTCCEEEEECCCS
T ss_pred CCEEEEEECCCCcceeeccCCC-CCCCcEEEEEEeCCCCcceEEEEe----------CCCeEEEEECCCCcEEEEEcCCC
Confidence 4567777766554444433221 222235556665544333333221 23568888877664322 21110
Q ss_pred ceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCcee
Q 047073 217 YVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQF 256 (316)
Q Consensus 217 ~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~ 256 (316)
.. -.++.+ +|.+...+.. ...|..+|+.+..-
T Consensus 562 ~~----v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 562 GY----VSTVAVSPDGSLCASGGK----DGVVLLWDLAEGKK 595 (694)
T ss_dssp SC----EEEEEECTTSSEEEEEET----TSBCEEEETTTTEE
T ss_pred CC----EEEEEEeCCCCEEEEEeC----CCeEEEEECCCCce
Confidence 00 012222 4554444433 45788899987653
No 144
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=21.98 E-value=3.1e+02 Score=22.07 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=38.6
Q ss_pred eeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCC-CCeEEEEEEEeecccccCCCCCeEE
Q 047073 122 LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCT-NQYKVIQILSYKDQAAISSSKPQVE 200 (316)
Q Consensus 122 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~-~~~kvv~~~~~~~~~~~~~~~~~~~ 200 (316)
..+.+|-.++.... ++.+.|||..++....+-... .+...+..+.+.+.. +.+ ++.. .....+.
T Consensus 16 ~~s~~g~~las~s~--D~~v~iw~~~~~~~~~~~~l~--gH~~~V~~v~~s~~~~g~~--l~s~---------s~D~~v~ 80 (297)
T 2pm7_B 16 VMDYYGKRMATCSS--DKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTI--LASC---------SYDGKVM 80 (297)
T ss_dssp EECTTSSEEEEEET--TSCEEEEEBCSSCBCCCEEEC--CCSSCEEEEEECCGGGCSE--EEEE---------ETTTEEE
T ss_pred EECCCCCEEEEEeC--CCEEEEEecCCCCcEEEEEEc--cccCCeEEEEecCCCcCCE--EEEE---------cCCCEEE
Confidence 34455655555424 678899987654221111111 122235566664421 222 2222 2246788
Q ss_pred EEEeCCCceEec
Q 047073 201 VHTIGTNTWRNI 212 (316)
Q Consensus 201 vy~s~t~~W~~~ 212 (316)
+++..++.|..+
T Consensus 81 iWd~~~~~~~~~ 92 (297)
T 2pm7_B 81 IWKEENGRWSQI 92 (297)
T ss_dssp EEEBSSSCBCCC
T ss_pred EEEcCCCceEEE
Confidence 999888877543
No 145
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=21.35 E-value=3.7e+02 Score=22.65 Aligned_cols=67 Identities=9% Similarity=-0.008 Sum_probs=35.8
Q ss_pred eccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEE
Q 047073 123 SSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVH 202 (316)
Q Consensus 123 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy 202 (316)
-+.+|-+++.... .+.+.+||..+++....-. ........+.+.+.. .+ ++ ... ....+.+|
T Consensus 147 ~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~~-~~-l~-s~~---------~d~~v~iw 208 (420)
T 3vl1_A 147 FFPSGEALISSSQ--DMQLKIWSVKDGSNPRTLI----GHRATVTDIAIIDRG-RN-VL-SAS---------LDGTIRLW 208 (420)
T ss_dssp ECTTSSEEEEEET--TSEEEEEETTTCCCCEEEE----CCSSCEEEEEEETTT-TE-EE-EEE---------TTSCEEEE
T ss_pred ECCCCCEEEEEeC--CCeEEEEeCCCCcCceEEc----CCCCcEEEEEEcCCC-CE-EE-EEc---------CCCcEEEe
Confidence 3335544444324 6789999998876432111 122336667777642 22 22 221 13457788
Q ss_pred EeCCC
Q 047073 203 TIGTN 207 (316)
Q Consensus 203 ~s~t~ 207 (316)
+..++
T Consensus 209 d~~~~ 213 (420)
T 3vl1_A 209 ECGTG 213 (420)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 87766
No 146
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=21.04 E-value=4.5e+02 Score=23.50 Aligned_cols=142 Identities=6% Similarity=0.035 Sum_probs=72.3
Q ss_pred CceEEEEcCCCCceEe-cCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCceEecC-CC
Q 047073 138 QDIISVCNPILGDHLV-LPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIG-DL 215 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~-lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W~~~~-~~ 215 (316)
.+.+.+||..+++... +... . ........+.+.+..+++-+.. .....+.+|+..++.-...- ..
T Consensus 182 d~~v~vwd~~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~~l~~~-----------~~dg~i~vwd~~~~~~~~~~~~~ 248 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDRTH-H-KQGSFVRDVEFSPDSGEFVITV-----------GSDRKISCFDGKSGEFLKYIEDD 248 (615)
T ss_dssp TTEEEEEETTTBEEEEEECSS-S-CTTCCEEEEEECSTTCCEEEEE-----------ETTCCEEEEETTTCCEEEECCBT
T ss_pred CCcEEEEeCCCcceeeeeccc-C-CCCceEEEEEECCCCCCEEEEE-----------eCCCeEEEEECCCCCEeEEeccc
Confidence 7889999988877543 3221 1 1001356777776533433322 12456888998877543221 10
Q ss_pred CceeccCCcceee-CCeEEEEEecCCCCccEEEEEeCCCcee-eEecCCCCccccCCCCccceEEEEECCeEEEEEccCC
Q 047073 216 PYVLNQPYYGAFL-NSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLE 293 (316)
Q Consensus 216 ~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~lPP~~~~~~~~~~~~~~L~~~~G~L~lv~~~~~ 293 (316)
.......-..+.+ +|.....+.. ...|..+|+.+.+. ..+..+...... ....+...+|...++... +
T Consensus 249 ~~~~~~~v~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~-~ 318 (615)
T 1pgu_A 249 QEPVQGGIFALSWLDSQKFATVGA----DATIRVWDVTTSKCVQKWTLDKQQLGN-----QQVGVVATGNGRIISLSL-D 318 (615)
T ss_dssp TBCCCSCEEEEEESSSSEEEEEET----TSEEEEEETTTTEEEEEEECCTTCGGG-----CEEEEEEEETTEEEEEET-T
T ss_pred ccccCCceEEEEEcCCCEEEEEcC----CCcEEEEECCCCcEEEEEcCCCCcccC-----ceeEEEeCCCCeEEEEEC-C
Confidence 0000011112222 6665555554 35899999987654 344552211111 222223335655555554 6
Q ss_pred CeEEEEEEe
Q 047073 294 PNLDIWIMK 302 (316)
Q Consensus 294 ~~~~vW~l~ 302 (316)
..+.+|-++
T Consensus 319 g~i~~~d~~ 327 (615)
T 1pgu_A 319 GTLNFYELG 327 (615)
T ss_dssp SCEEEEETT
T ss_pred CCEEEEECC
Confidence 788888764
No 147
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=20.92 E-value=5.3e+02 Score=24.26 Aligned_cols=149 Identities=12% Similarity=-0.008 Sum_probs=0.0
Q ss_pred ceeeeccCceEEeeeeccCCceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCe
Q 047073 119 LSLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQ 198 (316)
Q Consensus 119 ~~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~ 198 (316)
..+.-+.+|-.++.... .+.+.|||..+++....-.... .....+.+.+........ .....
T Consensus 59 ~~~~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~------------~~dg~ 120 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEAHP----DYIRSIAVHPTKPYVLSG------------SDDLT 120 (814)
T ss_dssp EEEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEECCS----SCEEEEEECSSSSEEEEE------------ETTSE
T ss_pred EEEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEecCC----CCEEEEEEeCCCCEEEEE------------cCCCE
Q ss_pred EEEEEeCCCceEecCCCCceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccce
Q 047073 199 VEVHTIGTNTWRNIGDLPYVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSI 276 (316)
Q Consensus 199 ~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~ 276 (316)
+.+|+..++ |.................+. +|.....+.. ...|..+|+.+..-..... .... ...
T Consensus 121 i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~~~~~~~-~~~~-------~~v 187 (814)
T 3mkq_A 121 VKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCL----DRTVKVWSLGQSTPNFTLT-TGQE-------RGV 187 (814)
T ss_dssp EEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEET----TSEEEEEETTCSSCSEEEE-CCCT-------TCC
T ss_pred EEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcceeEEe-cCCC-------CCE
Q ss_pred EEEEE----CCeEEEEEccCCCeEEEE
Q 047073 277 SVGVS----GGFLYLCDGFLEPNLDIW 299 (316)
Q Consensus 277 ~L~~~----~G~L~lv~~~~~~~~~vW 299 (316)
..+.. +|.+.++... +..+.+|
T Consensus 188 ~~~~~~~~~~~~~l~~~~~-dg~i~~~ 213 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASD-DLTIKIW 213 (814)
T ss_dssp CEEEECCSTTCCEEEEECT-TSEEEEE
T ss_pred EEEEEEECCCCCEEEEEeC-CCEEEEE
No 148
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=20.90 E-value=3.7e+02 Score=22.50 Aligned_cols=136 Identities=8% Similarity=-0.044 Sum_probs=64.4
Q ss_pred CceEEEEcCCCCceEecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEEeCCCce-EecCCCC
Q 047073 138 QDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTW-RNIGDLP 216 (316)
Q Consensus 138 ~~~~~v~NP~T~~~~~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~s~t~~W-~~~~~~~ 216 (316)
++.+.|||..+++....-.... .......+.+.+..+.+-+ .. .....+.+|+.+++.- ..+....
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~l~--sg---------~~dg~v~~wd~~~~~~~~~~~~h~ 257 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSA--PGYLPTSLAWHPQQSEVFV--FG---------DENGTVSLVDTKSTSCVLSSAVHS 257 (344)
T ss_dssp TSCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEE--EE---------ETTSEEEEEESCC--CCEEEECCS
T ss_pred ccccccccccccceeeeeecce--eeccceeeeecCCCCcceE--Ee---------ccCCcEEEEECCCCcEEEEEcCCC
Confidence 5678888888877544222111 1122455666554443322 22 1235688888776531 1111100
Q ss_pred ceeccCCcceee--CCeEEEEEecCCCCccEEEEEeCCCceeeEecCCCCccccCCCCccceEEEEE-CCe-EEEEEccC
Q 047073 217 YVLNQPYYGAFL--NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVS-GGF-LYLCDGFL 292 (316)
Q Consensus 217 ~~~~~~~~~v~~--~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~lPP~~~~~~~~~~~~~~L~~~-~G~-L~lv~~~~ 292 (316)
..-.++.+ +|.-|.++... ...|..+|+.+.+...+.. +.. .-..+.-. +|+ |..... .
T Consensus 258 ----~~v~~v~fsp~g~~~lasgs~---D~~i~vwd~~~~~~~~~~~---H~~------~V~~v~~sp~~~~llas~s-~ 320 (344)
T 4gqb_B 258 ----QCVTGLVFSPHSVPFLASLSE---DCSLAVLDSSLSELFRSQA---HRD------FVRDATWSPLNHSLLTTVG-W 320 (344)
T ss_dssp ----SCEEEEEECSSSSCCEEEEET---TSCEEEECTTCCEEEEECC---CSS------CEEEEEECSSSTTEEEEEE-T
T ss_pred ----CCEEEEEEccCCCeEEEEEeC---CCeEEEEECCCCcEEEEcC---CCC------CEEEEEEeCCCCeEEEEEc-C
Confidence 00112333 34333333332 3478889998876433221 111 22233332 454 554444 4
Q ss_pred CCeEEEEEEee
Q 047073 293 EPNLDIWIMKK 303 (316)
Q Consensus 293 ~~~~~vW~l~~ 303 (316)
+.++.+|.++.
T Consensus 321 D~~v~~w~v~~ 331 (344)
T 4gqb_B 321 DHQVVHHVVPT 331 (344)
T ss_dssp TSCEEEEECCC
T ss_pred CCeEEEEECCC
Confidence 78999999864
No 149
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=20.62 E-value=3.7e+02 Score=25.45 Aligned_cols=31 Identities=6% Similarity=-0.032 Sum_probs=23.4
Q ss_pred CcceeeCCeEEEEEecCCCCccEEEEEeCCCc--eeeE
Q 047073 223 YYGAFLNSALHWYAHSHDKRTAFMCSFDLGDE--QFRQ 258 (316)
Q Consensus 223 ~~~v~~~G~lywl~~~~~~~~~~i~~fD~~~~--~~~~ 258 (316)
..++..+|.+|.....+ .|.++|.++. .|+.
T Consensus 71 ~~P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~ 103 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS-----VVHAIDTRTGNRIWTY 103 (677)
T ss_dssp CCCEEETTEEEEECGGG-----CEEEEETTTTEEEEEE
T ss_pred eCCEEECCEEEEECCCC-----eEEEEECCCCcEEEEE
Confidence 44788999999887643 7999998765 5654
No 150
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=20.60 E-value=3.3e+02 Score=22.20 Aligned_cols=29 Identities=10% Similarity=0.023 Sum_probs=21.4
Q ss_pred CCeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 229 NSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 229 ~G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
+|.+||.... ...|..||.++..-..+..
T Consensus 42 ~g~lyv~d~~----~~~I~~~d~~g~~~~~~~~ 70 (306)
T 2p4o_A 42 DGTIFVTNHE----VGEIVSITPDGNQQIHATV 70 (306)
T ss_dssp TSCEEEEETT----TTEEEEECTTCCEEEEEEC
T ss_pred CCCEEEEeCC----CCeEEEECCCCceEEEEeC
Confidence 7889998755 3589999998865555555
No 151
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=20.60 E-value=5.6e+02 Score=24.42 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=56.0
Q ss_pred CeEEEEEeCCC--ceEecCCCCce--------eccCCcceeeC-----CeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 197 PQVEVHTIGTN--TWRNIGDLPYV--------LNQPYYGAFLN-----SALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 197 ~~~~vy~s~t~--~W~~~~~~~~~--------~~~~~~~v~~~-----G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
..+.+..|.++ +|.....++.. ......++.+. |.++.-..........++.=|=...+|+....
T Consensus 426 ~~i~v~~S~DgG~TWs~p~~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~~~s~i~~SdDgG~TW~~~~~ 505 (679)
T 2sli_A 426 NYLAMRYSDDEGASWSDLDIVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSSAELGFMYSDDHGDNWTYVEA 505 (679)
T ss_dssp CEEEEEEESSTTSSCCCCEECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESSCSEEEEEESSTTSSCEEEEC
T ss_pred eEEEEEEeCCCCccCCCCcccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCCCEEEEEEECCCCCceEeCcc
Confidence 34566677654 79764322210 00112245552 77766433211112233333334679998854
Q ss_pred C-CCccccCCCCccceEEEEE-CCeEEEEEccCCCeEEEEEEeeCCCCCCeeeEE
Q 047073 262 P-PTREYEKCRPINSISVGVS-GGFLYLCDGFLEPNLDIWIMKKYGVKESWTKEF 314 (316)
Q Consensus 262 P-P~~~~~~~~~~~~~~L~~~-~G~L~lv~~~~~~~~~vW~l~~~~~~~~W~~~~ 314 (316)
+ |... . .....++++ +|+|.++.........++.-.|. ++.|++..
T Consensus 506 ~~p~~~--~---~~e~~vve~~dG~L~~~~R~~~G~~~v~~S~Dg--G~TWt~~~ 553 (679)
T 2sli_A 506 DNLTGG--A---TAEAQIVEMPDGSLKTYLRTGSNCIAEVTSIDG--GETWSDRV 553 (679)
T ss_dssp CCCCSC--C---CCCEEEEECTTSCEEEEECCSSSSCEEEEESST--TSSCCCCE
T ss_pred CCCCCC--C---ccceEEEEeCCCEEEEEEEeCCCCEEEEEEcCC--CcCCCCCc
Confidence 2 2111 1 145567777 68888777654454455555443 45798754
No 152
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=20.49 E-value=4.8e+02 Score=23.68 Aligned_cols=110 Identities=5% Similarity=-0.031 Sum_probs=59.4
Q ss_pred cCceEEeeeeccCCceEEEEcCCCCceE-ecCCCCCCCccCceEEEEEeCCCCCeEEEEEEEeecccccCCCCCeEEEEE
Q 047073 125 CNGLICLHEFSYKQDIISVCNPILGDHL-VLPQLKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHT 203 (316)
Q Consensus 125 ~~Gll~~~~~~~~~~~~~v~NP~T~~~~-~lP~~~~~~~~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~~~~~~vy~ 203 (316)
-+|.+++.... ...+.|+|+.|++.. .++... ...++.+++. ++|-.+. . . ...+.+|+
T Consensus 147 p~~~~~vs~~~--d~~V~v~D~~t~~~~~~i~~g~------~~~~v~~spd-g~~l~v~-~---------~-d~~V~v~D 206 (543)
T 1nir_A 147 LPNLFSVTLRD--AGQIALVDGDSKKIVKVIDTGY------AVHISRMSAS-GRYLLVI-G---------R-DARIDMID 206 (543)
T ss_dssp GGGEEEEEEGG--GTEEEEEETTTCCEEEEEECST------TEEEEEECTT-SCEEEEE-E---------T-TSEEEEEE
T ss_pred CCCEEEEEEcC--CCeEEEEECCCceEEEEEecCc------ccceEEECCC-CCEEEEE-C---------C-CCeEEEEE
Confidence 36777666534 678999999999864 343211 1456667664 2333222 1 1 26788888
Q ss_pred e--CCCceEecCCCCceeccCCcceee------CCeEEEEEecCCCCccEEEEEeCCCcee-eEecC
Q 047073 204 I--GTNTWRNIGDLPYVLNQPYYGAFL------NSALHWYAHSHDKRTAFMCSFDLGDEQF-RQFPG 261 (316)
Q Consensus 204 s--~t~~W~~~~~~~~~~~~~~~~v~~------~G~lywl~~~~~~~~~~i~~fD~~~~~~-~~i~l 261 (316)
. .++.- +...+... ..+++.+ +|..-+.+... ...|.++|..+.+. ..++.
T Consensus 207 ~~~~t~~~--~~~i~~g~--~p~~va~sp~~~~dg~~l~v~~~~---~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 207 LWAKEPTK--VAEIKIGI--EARSVESSKFKGYEDRYTIAGAYW---PPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp TTSSSCEE--EEEEECCS--EEEEEEECCSTTCTTTEEEEEEEE---SSEEEEEETTTCCEEEEEEC
T ss_pred CcCCCCcE--EEEEecCC--CcceEEeCCCcCCCCCEEEEEEcc---CCeEEEEeccccccceeecc
Confidence 8 55532 11111100 0112222 67655555432 34789999887644 44455
No 153
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=20.13 E-value=4.4e+02 Score=23.05 Aligned_cols=128 Identities=11% Similarity=0.040 Sum_probs=63.6
Q ss_pred ccCceEEeeeeccCCceEEEEcCCCCceEecCCCCC-------CCc-cCceEEEEEeCCCCCeEEEEEEEeecccccCCC
Q 047073 124 SCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKR-------KNV-ATRIRGFGYNHCTNQYKVIQILSYKDQAAISSS 195 (316)
Q Consensus 124 s~~Gll~~~~~~~~~~~~~v~NP~T~~~~~lP~~~~-------~~~-~~~~~~~~~d~~~~~~kvv~~~~~~~~~~~~~~ 195 (316)
..+|-+++.. . .+.+++.|..++....+.+... ... ......+++++..+...|.. ... ..+.....
T Consensus 235 ~~dG~~~~vs-~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~-~~~-~~~~hk~~ 309 (386)
T 3sjl_D 235 QKAGRLVWPT-Y--TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV-DQR-DEWRHKTA 309 (386)
T ss_dssp TTTTEEEEEB-T--TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE-EEC-CTTCTTSC
T ss_pred cCCCcEEEEe-C--CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe-ccc-cccccCCC
Confidence 3467444433 2 5789999988776555444320 000 01122456676655433332 111 11110022
Q ss_pred CCeEEEEEeCCCceEecCCCCceeccCCcceeeCCe-EEEEEecCCCCccEEEEEeCCCcee-eEecC
Q 047073 196 KPQVEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSA-LHWYAHSHDKRTAFMCSFDLGDEQF-RQFPG 261 (316)
Q Consensus 196 ~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~i~~fD~~~~~~-~~i~l 261 (316)
...+.|++..++.-.. ..+.......-.+.-+|. .++....+ ...|.++|.++.+. ..++.
T Consensus 310 ~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~~---~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALSTG---DKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEETT---TTEEEEEETTTCCEEEEECC
T ss_pred CCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcCC---CCeEEEEECCCCcEEEEecC
Confidence 3568888888774322 111111111113555786 44444433 35899999988754 55677
No 154
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=20.08 E-value=3.6e+02 Score=22.00 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=22.5
Q ss_pred CeEEEEEecCCCCccEEEEEeCCCceeeEecC
Q 047073 230 SALHWYAHSHDKRTAFMCSFDLGDEQFRQFPG 261 (316)
Q Consensus 230 G~lywl~~~~~~~~~~i~~fD~~~~~~~~i~l 261 (316)
|.||....+ +..|+.+|++...++.+++
T Consensus 39 ~~L~aV~d~----~~~I~~ld~~g~v~~~i~l 66 (255)
T 3qqz_A 39 NTLFSTINK----PAAIVEMTTNGDLIRTIPL 66 (255)
T ss_dssp TEEEEEEET----TEEEEEEETTCCEEEEEEC
T ss_pred CEEEEEECC----CCeEEEEeCCCCEEEEEec
Confidence 566666666 5689999999888898887
Done!