Query 047075
Match_columns 83
No_of_seqs 117 out of 1051
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 07:22:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 99.1 7.2E-11 1.6E-15 71.3 3.3 41 43-83 61-103 (361)
2 KOG3653 Transforming growth fa 98.1 5.9E-06 1.3E-10 51.6 3.7 22 61-83 216-237 (534)
3 PLN00113 leucine-rich repeat r 97.8 4.5E-05 9.8E-10 51.2 5.2 22 61-82 696-718 (968)
4 KOG1025 Epidermal growth facto 97.7 4.2E-05 9.2E-10 51.1 3.0 22 61-82 702-724 (1177)
5 KOG0196 Tyrosine kinase, EPH ( 96.9 0.00053 1.1E-08 45.8 1.9 33 44-76 607-650 (996)
6 PLN03224 probable serine/threo 96.3 0.0014 3E-08 41.9 0.7 21 56-76 144-166 (507)
7 KOG0658 Glycogen synthase kina 96.2 0.002 4.4E-08 39.3 1.0 23 61-83 30-53 (364)
8 KOG0594 Protein kinase PCTAIRE 96.1 0.0055 1.2E-07 37.1 2.5 23 61-83 17-40 (323)
9 KOG2052 Activin A type IB rece 96.0 0.0077 1.7E-07 38.1 2.6 19 61-79 217-235 (513)
10 KOG0591 NIMA (never in mitosis 96.0 0.0068 1.5E-07 36.5 2.3 23 61-83 25-48 (375)
11 KOG0193 Serine/threonine prote 95.9 0.004 8.6E-08 40.6 1.3 16 61-76 398-413 (678)
12 KOG0595 Serine/threonine-prote 95.8 0.0058 1.3E-07 38.1 1.6 23 61-83 16-39 (429)
13 cd06624 STKc_ASK Catalytic dom 95.8 0.0025 5.4E-08 36.7 -0.0 27 52-78 3-31 (268)
14 KOG0597 Serine-threonine prote 95.7 0.0045 9.8E-08 40.5 1.0 16 61-76 8-23 (808)
15 PLN03225 Serine/threonine-prot 95.7 0.0041 8.9E-08 40.2 0.8 23 56-78 131-155 (566)
16 cd05144 RIO2_C RIO kinase fami 95.6 0.011 2.5E-07 32.9 2.1 23 61-83 21-43 (198)
17 cd06637 STKc_TNIK Catalytic do 95.4 0.0075 1.6E-07 34.7 1.1 24 55-78 4-29 (272)
18 cd06638 STKc_myosinIIIA Cataly 95.3 0.0055 1.2E-07 35.6 0.4 36 46-81 7-45 (286)
19 KOG0663 Protein kinase PITSLRE 95.3 0.01 2.2E-07 36.5 1.5 20 57-76 76-97 (419)
20 PF03109 ABC1: ABC1 family; I 95.3 0.01 2.2E-07 30.9 1.2 26 58-83 13-39 (119)
21 KOG0600 Cdc2-related protein k 95.3 0.013 2.8E-07 37.6 1.8 23 61-83 123-146 (560)
22 TIGR01982 UbiB 2-polyprenylphe 95.2 0.0091 2E-07 37.6 1.1 23 61-83 123-145 (437)
23 PTZ00284 protein kinase; Provi 95.0 0.0043 9.3E-08 38.9 -0.7 28 55-82 127-157 (467)
24 KOG0593 Predicted protein kina 95.0 0.012 2.7E-07 35.8 1.2 23 61-83 8-31 (396)
25 cd05067 PTKc_Lck_Blk Catalytic 95.0 0.012 2.6E-07 33.7 1.0 22 61-82 12-33 (260)
26 PHA02882 putative serine/threo 95.0 0.015 3.3E-07 34.2 1.5 19 61-79 18-36 (294)
27 KOG0659 Cdk activating kinase 94.9 0.019 4.2E-07 34.3 1.7 23 61-83 8-31 (318)
28 cd05072 PTKc_Lyn Catalytic dom 94.7 0.016 3.5E-07 33.2 1.1 22 61-82 12-33 (261)
29 cd06639 STKc_myosinIIIB Cataly 94.7 0.0056 1.2E-07 35.7 -0.8 35 47-81 12-49 (291)
30 KOG0662 Cyclin-dependent kinas 94.7 0.018 3.8E-07 32.8 1.2 17 61-77 8-24 (292)
31 KOG0201 Serine/threonine prote 94.6 0.02 4.3E-07 36.1 1.4 16 61-76 19-34 (467)
32 cd07879 STKc_p38delta_MAPK13 C 94.4 0.022 4.7E-07 34.3 1.3 22 61-82 21-43 (342)
33 cd05631 STKc_GRK4 Catalytic do 94.4 0.02 4.3E-07 33.5 1.1 22 61-82 6-28 (285)
34 cd05148 PTKc_Srm_Brk Catalytic 94.4 0.028 6E-07 32.2 1.6 22 61-82 12-33 (261)
35 PRK09188 serine/threonine prot 94.3 0.022 4.8E-07 35.2 1.1 21 61-81 24-46 (365)
36 cd06636 STKc_MAP4K4_6 Catalyti 94.2 0.024 5.3E-07 32.9 1.1 34 48-81 7-43 (282)
37 KOG0574 STE20-like serine/thre 94.2 0.0075 1.6E-07 36.8 -1.0 23 61-83 39-62 (502)
38 cd05033 PTKc_EphR Catalytic do 93.9 0.035 7.6E-07 31.9 1.4 17 61-77 10-26 (266)
39 cd05064 PTKc_EphR_A10 Catalyti 93.9 0.026 5.6E-07 32.6 0.9 17 61-77 11-27 (266)
40 cd05070 PTKc_Fyn_Yrk Catalytic 93.9 0.046 1E-06 31.3 1.9 22 61-82 12-33 (260)
41 cd05034 PTKc_Src_like Catalyti 93.8 0.031 6.7E-07 32.0 1.1 21 61-81 12-32 (261)
42 cd05632 STKc_GRK5 Catalytic do 93.8 0.033 7.1E-07 32.6 1.2 22 61-82 6-28 (285)
43 PLN00034 mitogen-activated pro 93.8 0.059 1.3E-06 32.6 2.3 22 61-82 80-102 (353)
44 smart00090 RIO RIO-like kinase 93.8 0.034 7.4E-07 32.2 1.2 23 61-83 34-58 (237)
45 PF01102 Glycophorin_A: Glycop 93.8 0.12 2.6E-06 27.2 3.1 7 17-23 86-92 (122)
46 cd05108 PTKc_EGFR Catalytic do 93.7 0.038 8.2E-07 32.8 1.4 17 61-77 13-29 (316)
47 cd05626 STKc_LATS2 Catalytic d 93.7 0.038 8.3E-07 33.8 1.4 22 61-82 7-29 (381)
48 cd06631 STKc_YSK4 Catalytic do 93.7 0.041 8.8E-07 31.6 1.4 22 61-82 6-27 (265)
49 KOG0581 Mitogen-activated prot 93.7 0.076 1.7E-06 32.8 2.5 22 61-82 85-107 (364)
50 KOG0661 MAPK related serine/th 93.6 0.059 1.3E-06 34.6 2.0 23 61-83 16-39 (538)
51 PTZ00036 glycogen synthase kin 93.5 0.037 8.1E-07 34.7 1.1 22 61-82 72-94 (440)
52 cd05103 PTKc_VEGFR2 Catalytic 93.5 0.042 9.2E-07 33.1 1.2 15 61-75 13-27 (343)
53 cd07878 STKc_p38beta_MAPK11 Ca 93.4 0.075 1.6E-06 31.9 2.3 22 61-82 21-43 (343)
54 cd05114 PTKc_Tec_Rlk Catalytic 93.4 0.04 8.6E-07 31.5 1.1 21 61-81 10-30 (256)
55 cd05102 PTKc_VEGFR3 Catalytic 93.4 0.043 9.3E-07 32.8 1.2 16 61-76 13-28 (338)
56 cd07864 STKc_CDK12 Catalytic d 93.4 0.067 1.4E-06 31.3 2.0 26 57-82 7-35 (302)
57 cd07877 STKc_p38alpha_MAPK14 C 93.2 0.04 8.6E-07 33.2 0.9 33 50-82 10-45 (345)
58 KOG1166 Mitotic checkpoint ser 93.1 0.049 1.1E-06 37.7 1.2 23 61-83 704-726 (974)
59 KOG0192 Tyrosine kinase specif 93.1 0.068 1.5E-06 33.0 1.7 18 61-78 47-64 (362)
60 cd08224 STKc_Nek6_Nek7 Catalyt 93.0 0.045 9.8E-07 31.3 0.9 22 61-82 8-30 (267)
61 cd05068 PTKc_Frk_like Catalyti 93.0 0.043 9.3E-07 31.5 0.8 22 61-82 12-33 (261)
62 cd05109 PTKc_HER2 Catalytic do 93.0 0.068 1.5E-06 31.0 1.6 20 61-80 13-33 (279)
63 cd05615 STKc_cPKC_alpha Cataly 93.0 0.049 1.1E-06 32.6 1.1 22 61-82 6-28 (323)
64 KOG1006 Mitogen-activated prot 92.9 0.04 8.6E-07 33.2 0.5 23 61-83 70-93 (361)
65 PTZ00283 serine/threonine prot 92.9 0.053 1.1E-06 34.7 1.1 23 61-83 38-61 (496)
66 cd07867 STKc_CDC2L6 Catalytic 92.9 0.071 1.5E-06 31.5 1.6 18 61-78 7-24 (317)
67 cd06620 PKc_MAPKK_Byr1_like Ca 92.8 0.11 2.5E-06 30.2 2.4 22 61-82 11-33 (284)
68 cd05111 PTK_HER3 Pseudokinase 92.8 0.085 1.8E-06 30.7 1.8 20 61-80 13-33 (279)
69 PF02009 Rifin_STEVOR: Rifin/s 92.7 0.11 2.3E-06 31.5 2.1 7 18-24 279-285 (299)
70 KOG4236 Serine/threonine prote 92.7 0.12 2.6E-06 34.1 2.4 26 58-83 566-593 (888)
71 cd05043 PTK_Ryk Pseudokinase d 92.7 0.048 1E-06 31.6 0.6 18 61-78 12-29 (280)
72 cd05616 STKc_cPKC_beta Catalyt 92.7 0.062 1.3E-06 32.1 1.1 18 61-78 6-23 (323)
73 PRK04750 ubiB putative ubiquin 92.6 0.12 2.6E-06 33.7 2.4 23 61-83 125-148 (537)
74 KOG0194 Protein tyrosine kinas 92.6 0.067 1.4E-06 34.3 1.3 17 61-77 163-179 (474)
75 cd06617 PKc_MKK3_6 Catalytic d 92.6 0.067 1.5E-06 31.0 1.2 22 61-82 7-29 (283)
76 cd07868 STKc_CDK8 Catalytic do 92.6 0.099 2.1E-06 31.0 1.9 18 61-78 7-24 (317)
77 cd05622 STKc_ROCK1 Catalytic d 92.5 0.04 8.7E-07 33.7 0.2 23 56-78 42-66 (371)
78 cd05096 PTKc_DDR1 Catalytic do 92.5 0.087 1.9E-06 31.0 1.6 18 61-78 11-28 (304)
79 cd05073 PTKc_Hck Catalytic dom 92.5 0.069 1.5E-06 30.7 1.1 20 61-80 12-31 (260)
80 cd05599 STKc_NDR_like Catalyti 92.4 0.066 1.4E-06 32.4 1.1 22 61-82 7-29 (364)
81 cd05587 STKc_cPKC Catalytic do 92.3 0.07 1.5E-06 31.9 1.1 18 61-78 6-23 (324)
82 cd05605 STKc_GRK4_like Catalyt 92.3 0.077 1.7E-06 31.0 1.2 22 61-82 6-28 (285)
83 cd05623 STKc_MRCK_alpha Cataly 92.2 0.075 1.6E-06 31.9 1.1 18 61-78 7-24 (332)
84 cd07862 STKc_CDK6 Catalytic do 92.2 0.086 1.9E-06 30.7 1.3 16 61-76 7-22 (290)
85 cd05621 STKc_ROCK2 Catalytic d 92.1 0.051 1.1E-06 33.3 0.4 22 61-82 49-71 (370)
86 cd05624 STKc_MRCK_beta Catalyt 92.1 0.078 1.7E-06 31.8 1.1 17 61-77 7-23 (331)
87 cd06632 STKc_MEKK1_plant Catal 92.1 0.092 2E-06 29.9 1.4 22 61-82 6-28 (258)
88 cd07871 STKc_PCTAIRE3 Catalyti 92.1 0.088 1.9E-06 30.8 1.3 22 61-82 11-33 (288)
89 cd05597 STKc_DMPK_like Catalyt 92.0 0.081 1.8E-06 31.7 1.1 22 61-82 7-29 (331)
90 PTZ00263 protein kinase A cata 92.0 0.066 1.4E-06 32.1 0.7 22 61-82 24-46 (329)
91 cd06642 STKc_STK25-YSK1 Cataly 92.0 0.17 3.7E-06 29.3 2.4 22 61-82 10-32 (277)
92 cd05596 STKc_ROCK Catalytic do 92.0 0.08 1.7E-06 32.4 1.0 26 57-82 43-71 (370)
93 PRK09605 bifunctional UGMP fam 91.9 0.11 2.4E-06 33.5 1.6 20 61-80 339-358 (535)
94 cd05625 STKc_LATS1 Catalytic d 91.9 0.085 1.9E-06 32.2 1.1 22 61-82 7-29 (382)
95 cd07853 STKc_NLK Catalytic dom 91.9 0.11 2.3E-06 31.7 1.5 22 61-82 6-28 (372)
96 cd07863 STKc_CDK4 Catalytic do 91.7 0.11 2.5E-06 30.1 1.5 22 61-82 6-28 (288)
97 KOG0605 NDR and related serine 91.7 0.11 2.4E-06 33.7 1.5 26 58-83 142-170 (550)
98 cd05612 STKc_PRKX_like Catalyt 91.7 0.11 2.3E-06 30.6 1.4 22 61-82 7-29 (291)
99 cd07837 STKc_CdkB_plant Cataly 91.7 0.1 2.2E-06 30.5 1.2 22 61-82 7-29 (295)
100 cd06616 PKc_MKK4 Catalytic dom 91.7 0.19 4E-06 29.3 2.3 22 61-82 10-32 (288)
101 cd06629 STKc_MAPKKK_Bck1_like 91.7 0.12 2.6E-06 29.8 1.5 22 61-82 7-29 (272)
102 KOG0575 Polo-like serine/threo 91.7 0.11 2.4E-06 34.1 1.4 23 61-83 24-47 (592)
103 cd06641 STKc_MST3 Catalytic do 91.6 0.12 2.5E-06 30.1 1.4 22 61-82 10-32 (277)
104 cd05063 PTKc_EphR_A2 Catalytic 91.6 0.12 2.6E-06 29.8 1.4 17 61-77 11-27 (268)
105 cd08229 STKc_Nek7 Catalytic do 91.6 0.17 3.6E-06 29.1 2.0 21 61-81 8-29 (267)
106 cd05071 PTKc_Src Catalytic dom 91.5 0.13 2.9E-06 29.6 1.6 20 61-80 12-31 (262)
107 cd05112 PTKc_Itk Catalytic dom 91.4 0.13 2.9E-06 29.3 1.5 20 61-80 10-29 (256)
108 KOG4250 TANK binding protein k 91.4 0.12 2.7E-06 34.5 1.5 23 61-83 19-42 (732)
109 cd05600 STKc_Sid2p_Dbf2p Catal 91.3 0.14 3.1E-06 30.7 1.6 22 61-82 7-29 (333)
110 cd07845 STKc_CDK10 Catalytic d 91.3 0.1 2.2E-06 30.9 0.9 22 61-82 13-35 (309)
111 cd07848 STKc_CDKL5 Catalytic d 91.2 0.12 2.5E-06 30.1 1.2 22 61-82 7-29 (287)
112 cd05054 PTKc_VEGFR Catalytic d 91.2 0.13 2.8E-06 31.1 1.4 16 61-76 13-28 (337)
113 KOG0694 Serine/threonine prote 91.2 0.093 2E-06 34.9 0.8 24 58-81 369-395 (694)
114 cd06646 STKc_MAP4K5 Catalytic 91.2 0.15 3.2E-06 29.4 1.6 22 61-82 15-37 (267)
115 cd06645 STKc_MAP4K3 Catalytic 91.2 0.23 5.1E-06 28.5 2.4 21 61-81 15-36 (267)
116 cd05036 PTKc_ALK_LTK Catalytic 91.1 0.12 2.6E-06 30.0 1.1 22 57-78 6-29 (277)
117 cd05573 STKc_ROCK_NDR_like Cat 91.1 0.11 2.4E-06 31.2 1.0 22 61-82 7-29 (350)
118 cd06650 PKc_MEK1 Catalytic dom 91.1 0.17 3.8E-06 30.4 1.8 17 61-77 11-27 (333)
119 cd05059 PTKc_Tec_like Catalyti 91.0 0.19 4.1E-06 28.8 1.9 19 61-79 10-28 (256)
120 cd05629 STKc_NDR_like_fungal C 91.0 0.12 2.6E-06 31.6 1.1 22 61-82 7-29 (377)
121 cd05104 PTKc_Kit Catalytic dom 91.0 0.12 2.7E-06 31.6 1.2 16 61-76 41-56 (375)
122 cd05049 PTKc_Trk Catalytic dom 91.0 0.19 4E-06 29.1 1.9 18 61-78 11-28 (280)
123 cd05106 PTKc_CSF-1R Catalytic 90.9 0.14 3.1E-06 31.4 1.4 16 61-76 44-59 (374)
124 cd07872 STKc_PCTAIRE2 Catalyti 90.9 0.13 2.9E-06 30.4 1.2 17 61-77 12-28 (309)
125 cd05069 PTKc_Yes Catalytic dom 90.9 0.17 3.8E-06 29.0 1.7 20 61-80 12-31 (260)
126 cd05601 STKc_CRIK Catalytic do 90.9 0.12 2.6E-06 30.9 1.1 22 61-82 7-29 (330)
127 cd05090 PTKc_Ror1 Catalytic do 90.9 0.11 2.5E-06 30.1 0.9 16 61-76 11-26 (283)
128 cd05630 STKc_GRK6 Catalytic do 90.8 0.14 3E-06 30.0 1.2 21 61-81 6-27 (285)
129 cd06649 PKc_MEK2 Catalytic dom 90.8 0.13 2.8E-06 30.8 1.1 21 61-81 11-32 (331)
130 cd05088 PTKc_Tie2 Catalytic do 90.8 0.14 3.1E-06 30.2 1.3 17 61-77 13-29 (303)
131 cd06652 STKc_MEKK2 Catalytic d 90.6 0.12 2.6E-06 29.7 0.9 22 61-82 8-30 (265)
132 KOG4257 Focal adhesion tyrosin 90.5 0.2 4.4E-06 33.7 1.8 16 61-76 395-410 (974)
133 PTZ00024 cyclin-dependent prot 90.5 0.21 4.5E-06 29.9 1.8 22 61-82 15-37 (335)
134 cd05628 STKc_NDR1 Catalytic do 90.5 0.14 3.1E-06 31.1 1.1 22 61-82 7-29 (363)
135 cd06651 STKc_MEKK3 Catalytic d 90.4 0.16 3.6E-06 29.2 1.3 17 61-77 8-24 (266)
136 cd05089 PTKc_Tie1 Catalytic do 90.4 0.18 3.8E-06 29.7 1.4 18 61-78 8-25 (297)
137 cd07869 STKc_PFTAIRE1 Catalyti 90.3 0.13 2.8E-06 30.3 0.8 22 61-82 11-33 (303)
138 cd07843 STKc_CDC2L1 Catalytic 90.3 0.28 6.1E-06 28.7 2.2 21 61-81 11-32 (293)
139 cd07852 STKc_MAPK15 Catalytic 90.3 0.33 7.1E-06 29.1 2.5 21 61-81 13-34 (337)
140 cd08228 STKc_Nek6 Catalytic do 90.3 0.16 3.4E-06 29.2 1.1 21 61-81 8-29 (267)
141 cd07849 STKc_ERK1_2_like Catal 90.1 0.12 2.5E-06 31.1 0.5 22 61-82 11-33 (336)
142 cd05039 PTKc_Csk_like Catalyti 90.1 0.16 3.5E-06 29.0 1.1 18 61-78 12-29 (256)
143 KOG1167 Serine/threonine prote 90.1 0.084 1.8E-06 33.1 -0.1 17 61-77 42-58 (418)
144 cd05091 PTKc_Ror2 Catalytic do 90.0 0.39 8.4E-06 27.9 2.6 17 61-77 11-27 (283)
145 cd05627 STKc_NDR2 Catalytic do 90.0 0.17 3.7E-06 30.7 1.1 22 61-82 7-29 (360)
146 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 89.9 0.21 4.5E-06 29.1 1.4 16 61-76 10-25 (284)
147 cd07870 STKc_PFTAIRE2 Catalyti 89.9 0.1 2.3E-06 30.4 0.2 21 61-81 11-32 (291)
148 cd05045 PTKc_RET Catalytic dom 89.7 0.2 4.4E-06 29.2 1.3 16 61-76 6-21 (290)
149 KOG0198 MEKK and related serin 89.7 0.27 5.9E-06 30.0 1.8 20 61-80 23-43 (313)
150 cd06607 STKc_TAO Catalytic dom 89.7 0.25 5.4E-06 29.2 1.7 22 61-82 21-43 (307)
151 cd07846 STKc_CDKL2_3 Catalytic 89.7 0.22 4.9E-06 28.9 1.4 22 61-82 7-29 (286)
152 KOG1163 Casein kinase (serine/ 89.6 0.2 4.2E-06 30.0 1.1 23 61-83 21-44 (341)
153 cd05105 PTKc_PDGFR_alpha Catal 89.6 0.21 4.6E-06 31.1 1.4 16 61-76 43-58 (400)
154 cd06622 PKc_MAPKK_PBS2_like Ca 89.5 0.29 6.3E-06 28.5 1.8 22 61-82 7-29 (286)
155 cd05110 PTKc_HER4 Catalytic do 89.4 0.3 6.4E-06 28.9 1.8 16 61-76 13-28 (303)
156 cd06611 STKc_SLK_like Catalyti 89.4 0.43 9.4E-06 27.6 2.5 21 61-81 11-32 (280)
157 cd08528 STKc_Nek10 Catalytic d 89.2 0.37 7.9E-06 27.7 2.1 18 61-78 6-23 (269)
158 cd05113 PTKc_Btk_Bmx Catalytic 89.2 0.29 6.2E-06 28.1 1.6 20 61-80 10-29 (256)
159 PF14575 EphA2_TM: Ephrin type 89.2 0.029 6.2E-07 27.0 -2.1 17 45-61 55-71 (75)
160 cd05057 PTKc_EGFR_like Catalyt 89.2 0.25 5.5E-06 28.6 1.4 17 61-77 13-29 (279)
161 PF01034 Syndecan: Syndecan do 89.1 0.11 2.5E-06 24.1 -0.0 8 14-21 28-35 (64)
162 cd07880 STKc_p38gamma_MAPK12 C 89.1 0.19 4E-06 30.4 0.8 22 61-82 21-43 (343)
163 cd05614 STKc_MSK2_N N-terminal 88.9 0.21 4.6E-06 29.8 1.0 16 61-76 6-21 (332)
164 cd05598 STKc_LATS Catalytic do 88.9 0.29 6.3E-06 29.9 1.6 22 61-82 7-29 (376)
165 KOG0666 Cyclin C-dependent kin 88.9 0.29 6.3E-06 30.3 1.5 17 61-77 30-46 (438)
166 PLN00009 cyclin-dependent kina 88.9 0.21 4.5E-06 29.2 0.9 22 61-82 8-30 (294)
167 cd06618 PKc_MKK7 Catalytic dom 88.9 0.24 5.2E-06 29.1 1.2 22 61-82 21-43 (296)
168 cd07856 STKc_Sty1_Hog1 Catalyt 88.9 0.11 2.3E-06 31.2 -0.3 29 53-81 6-37 (328)
169 PF12273 RCR: Chitin synthesis 88.8 0.55 1.2E-05 24.8 2.4 7 12-18 17-23 (130)
170 KOG0598 Ribosomal protein S6 k 88.8 0.26 5.6E-06 30.5 1.3 19 59-77 27-47 (357)
171 cd06635 STKc_TAO1 Catalytic do 88.7 0.39 8.5E-06 28.6 2.0 21 61-81 31-52 (317)
172 cd07844 STKc_PCTAIRE_like Cata 88.7 0.19 4.2E-06 29.3 0.7 21 61-81 11-32 (291)
173 KOG0032 Ca2+/calmodulin-depend 88.6 0.38 8.2E-06 30.1 2.0 23 61-83 41-64 (382)
174 PHA03210 serine/threonine kina 88.6 0.23 5E-06 31.8 1.1 20 57-76 148-169 (501)
175 cd05062 PTKc_IGF-1R Catalytic 88.6 0.25 5.5E-06 28.6 1.2 20 57-76 6-27 (277)
176 PF05393 Hum_adeno_E3A: Human 88.5 1.1 2.4E-05 22.2 3.1 6 12-17 47-52 (94)
177 cd05107 PTKc_PDGFR_beta Cataly 88.5 0.38 8.3E-06 30.0 2.0 17 61-77 43-59 (401)
178 cd06619 PKc_MKK5 Catalytic dom 88.5 0.3 6.5E-06 28.4 1.4 22 61-82 7-29 (279)
179 cd06657 STKc_PAK4 Catalytic do 88.5 0.39 8.4E-06 28.3 1.9 22 61-82 26-48 (292)
180 COG0661 AarF Predicted unusual 88.5 0.23 5.1E-06 32.2 1.0 26 58-83 127-153 (517)
181 KOG1035 eIF-2alpha kinase GCN2 88.4 0.46 9.9E-06 34.1 2.3 16 61-76 485-500 (1351)
182 cd05581 STKc_PDK1 Catalytic do 88.3 0.31 6.7E-06 28.1 1.4 22 61-82 7-29 (280)
183 KOG1095 Protein tyrosine kinas 88.3 0.26 5.6E-06 34.6 1.1 17 61-77 698-714 (1025)
184 cd07859 STKc_TDY_MAPK_plant Ca 88.2 0.26 5.5E-06 29.4 1.0 22 61-82 6-28 (338)
185 cd05032 PTKc_InsR_like Catalyt 88.2 0.28 6E-06 28.3 1.2 17 61-77 12-28 (277)
186 cd05061 PTKc_InsR Catalytic do 88.2 0.31 6.8E-06 28.5 1.4 16 61-76 12-27 (288)
187 cd06625 STKc_MEKK3_like Cataly 88.1 0.31 6.6E-06 27.9 1.3 22 61-82 8-30 (263)
188 cd06644 STKc_STK10_LOK Catalyt 88.0 0.41 8.8E-06 28.0 1.8 21 61-81 18-39 (292)
189 PHA03390 pk1 serine/threonine- 88.0 0.73 1.6E-05 26.7 2.8 15 63-77 24-38 (267)
190 cd06609 STKc_MST3_like Catalyt 87.8 0.47 1E-05 27.4 2.0 22 61-82 7-29 (274)
191 cd07861 STKc_CDK1_euk Catalyti 87.8 0.33 7.2E-06 28.1 1.3 22 61-82 6-28 (285)
192 cd06640 STKc_MST4 Catalytic do 87.8 0.53 1.1E-05 27.3 2.1 22 61-82 10-32 (277)
193 cd08225 STKc_Nek5 Catalytic do 87.8 0.33 7.1E-06 27.6 1.3 18 61-78 6-23 (257)
194 cd07873 STKc_PCTAIRE1 Catalyti 87.7 0.32 7E-06 28.6 1.3 17 61-77 12-28 (301)
195 PHA03209 serine/threonine kina 87.7 0.43 9.3E-06 29.1 1.8 21 58-78 67-89 (357)
196 cd07876 STKc_JNK2 Catalytic do 87.7 0.43 9.2E-06 29.0 1.8 22 61-82 27-49 (359)
197 cd06917 STKc_NAK1_like Catalyt 87.7 0.44 9.5E-06 27.6 1.8 21 61-81 7-28 (277)
198 cd05048 PTKc_Ror Catalytic Dom 87.6 0.44 9.6E-06 27.6 1.8 17 61-77 11-27 (283)
199 cd06653 STKc_MEKK3_like_1 Cata 87.6 0.29 6.3E-06 28.1 1.0 21 61-81 8-29 (264)
200 cd07866 STKc_BUR1 Catalytic do 87.5 0.25 5.4E-06 29.0 0.7 20 61-80 14-34 (311)
201 cd05065 PTKc_EphR_B Catalytic 87.5 0.39 8.4E-06 27.7 1.4 17 61-77 10-26 (269)
202 cd06610 STKc_OSR1_SPAK Catalyt 87.4 0.37 8E-06 27.5 1.3 17 61-77 7-23 (267)
203 PTZ00426 cAMP-dependent protei 87.2 0.3 6.5E-06 29.6 0.9 17 61-77 36-52 (340)
204 cd07865 STKc_CDK9 Catalytic do 87.2 0.29 6.4E-06 28.7 0.9 22 61-82 18-40 (310)
205 cd07847 STKc_CDKL1_4 Catalytic 87.2 0.39 8.3E-06 27.8 1.3 22 61-82 7-29 (286)
206 cd05052 PTKc_Abl Catalytic dom 87.1 0.41 8.8E-06 27.5 1.4 17 61-77 12-28 (263)
207 cd06612 STKc_MST1_2 Catalytic 87.0 0.55 1.2E-05 26.7 1.9 18 61-78 9-26 (256)
208 cd06606 STKc_MAPKKK Catalytic 86.7 0.39 8.4E-06 27.1 1.2 21 61-81 6-27 (260)
209 PHA02988 hypothetical protein; 86.7 0.44 9.6E-06 28.0 1.4 35 44-82 12-46 (283)
210 cd07832 STKc_CCRK Catalytic do 86.7 0.45 9.8E-06 27.6 1.4 22 61-82 6-28 (286)
211 cd06643 STKc_SLK Catalytic dom 86.7 0.58 1.3E-05 27.2 1.9 18 61-78 11-28 (282)
212 cd07841 STKc_CDK7 Catalytic do 86.6 0.42 9.1E-06 28.0 1.3 22 61-82 6-28 (298)
213 cd08529 STKc_FA2-like Catalyti 86.6 0.45 9.7E-06 27.1 1.4 21 61-81 6-27 (256)
214 PF05454 DAG1: Dystroglycan (D 86.4 0.21 4.6E-06 30.1 0.0 9 14-22 164-172 (290)
215 PTZ00046 rifin; Provisional 86.3 0.84 1.8E-05 28.4 2.4 7 18-24 338-344 (358)
216 cd05051 PTKc_DDR Catalytic dom 86.3 0.53 1.2E-05 27.5 1.6 18 61-78 11-28 (296)
217 cd07874 STKc_JNK3 Catalytic do 86.3 0.41 8.8E-06 29.0 1.1 20 57-76 17-38 (355)
218 cd06633 STKc_TAO3 Catalytic do 86.2 0.49 1.1E-05 28.2 1.4 17 61-77 27-43 (313)
219 cd06605 PKc_MAPKK Catalytic do 86.2 0.7 1.5E-05 26.4 2.0 21 61-81 7-28 (265)
220 cd07836 STKc_Pho85 Catalytic d 86.1 0.47 1E-05 27.5 1.3 22 61-82 6-28 (284)
221 cd06656 STKc_PAK3 Catalytic do 86.1 0.48 1E-05 27.9 1.4 22 61-82 25-47 (297)
222 KOG0197 Tyrosine kinases [Sign 86.1 0.78 1.7E-05 29.6 2.3 22 61-82 212-233 (468)
223 cd05050 PTKc_Musk Catalytic do 86.0 0.44 9.5E-06 27.8 1.1 17 61-77 11-27 (288)
224 cd06615 PKc_MEK Catalytic doma 85.8 0.52 1.1E-05 27.9 1.4 20 61-80 7-27 (308)
225 cd05038 PTKc_Jak_rpt2 Catalyti 85.7 0.54 1.2E-05 27.2 1.4 17 61-77 10-26 (284)
226 cd06659 STKc_PAK6 Catalytic do 85.7 0.68 1.5E-05 27.3 1.9 22 61-82 27-49 (297)
227 cd05613 STKc_MSK1_N N-terminal 85.7 0.52 1.1E-05 27.5 1.4 16 61-76 6-21 (290)
228 cd07839 STKc_CDK5 Catalytic do 85.6 0.5 1.1E-05 27.4 1.3 21 61-81 6-27 (284)
229 KOG1024 Receptor-like protein 85.5 5.1 0.00011 26.0 5.5 18 61-78 290-307 (563)
230 cd05610 STKc_MASTL Catalytic d 85.5 0.35 7.7E-06 32.2 0.7 22 61-82 10-32 (669)
231 TIGR01477 RIFIN variant surfac 85.5 1.2 2.6E-05 27.7 2.8 7 18-24 333-339 (353)
232 KOG1164 Casein kinase (serine/ 85.4 0.53 1.2E-05 28.4 1.4 17 61-77 24-40 (322)
233 cd05046 PTK_CCK4 Pseudokinase 85.4 0.53 1.2E-05 27.2 1.3 17 61-77 11-27 (275)
234 cd05082 PTKc_Csk Catalytic dom 85.4 0.61 1.3E-05 26.7 1.5 18 61-78 12-29 (256)
235 cd07855 STKc_ERK5 Catalytic do 85.3 0.44 9.5E-06 28.6 1.0 22 61-82 11-33 (334)
236 cd07833 STKc_CDKL Catalytic do 85.3 0.53 1.2E-05 27.3 1.3 21 61-81 7-28 (288)
237 PHA03212 serine/threonine kina 85.3 0.67 1.4E-05 28.8 1.8 22 61-82 98-120 (391)
238 cd06626 STKc_MEKK4 Catalytic d 85.3 0.55 1.2E-05 26.8 1.3 21 61-81 6-27 (264)
239 cd07860 STKc_CDK2_3 Catalytic 85.2 0.57 1.2E-05 27.2 1.4 22 61-82 6-28 (284)
240 cd06634 STKc_TAO2 Catalytic do 85.1 0.88 1.9E-05 27.0 2.1 17 61-77 21-37 (308)
241 cd07854 STKc_MAPK4_6 Catalytic 84.9 0.72 1.6E-05 27.8 1.8 22 61-82 11-33 (342)
242 cd06614 STKc_PAK Catalytic dom 84.8 0.57 1.2E-05 27.3 1.3 17 61-77 25-41 (286)
243 cd08217 STKc_Nek2 Catalytic do 84.5 0.64 1.4E-05 26.4 1.4 17 61-77 6-22 (265)
244 cd05092 PTKc_TrkA Catalytic do 84.4 0.69 1.5E-05 26.9 1.5 16 61-76 11-26 (280)
245 cd05056 PTKc_FAK Catalytic dom 84.4 0.63 1.4E-05 26.8 1.3 18 61-78 12-29 (270)
246 cd07842 STKc_CDK8_like Catalyt 84.3 0.76 1.6E-05 27.1 1.6 18 61-78 6-23 (316)
247 cd07875 STKc_JNK1 Catalytic do 84.2 0.61 1.3E-05 28.3 1.2 20 57-76 24-45 (364)
248 PRK13184 pknD serine/threonine 84.1 0.57 1.2E-05 32.7 1.2 22 61-82 8-30 (932)
249 cd05574 STKc_phototropin_like 84.0 0.65 1.4E-05 27.5 1.3 21 61-81 7-28 (316)
250 cd05079 PTKc_Jak1_rpt2 Catalyt 83.9 0.79 1.7E-05 26.7 1.6 16 61-76 10-25 (284)
251 cd05053 PTKc_FGFR Catalytic do 83.6 0.53 1.1E-05 27.5 0.8 17 61-77 18-34 (293)
252 cd05580 STKc_PKA Catalytic dom 83.3 0.69 1.5E-05 27.1 1.2 22 61-82 7-29 (290)
253 KOG0580 Serine/threonine prote 83.2 0.87 1.9E-05 27.2 1.5 19 61-79 28-46 (281)
254 PHA03211 serine/threonine kina 83.2 0.9 2E-05 29.1 1.7 18 61-78 175-192 (461)
255 cd06608 STKc_myosinIII_like Ca 83.2 0.4 8.6E-06 27.5 0.2 22 56-77 5-28 (275)
256 cd05097 PTKc_DDR_like Catalyti 83.1 0.73 1.6E-05 27.0 1.2 17 61-77 11-27 (295)
257 cd08218 STKc_Nek1 Catalytic do 83.1 0.74 1.6E-05 26.2 1.2 20 61-80 6-26 (256)
258 KOG0199 ACK and related non-re 83.1 0.79 1.7E-05 31.5 1.5 21 61-81 116-138 (1039)
259 cd05083 PTKc_Chk Catalytic dom 83.1 0.62 1.3E-05 26.6 0.9 18 61-78 12-29 (254)
260 cd07858 STKc_TEY_MAPK_plant Ca 82.9 0.97 2.1E-05 27.2 1.7 21 61-81 11-32 (337)
261 cd05066 PTKc_EphR_A Catalytic 82.8 0.71 1.5E-05 26.6 1.1 16 61-76 10-25 (267)
262 cd05095 PTKc_DDR2 Catalytic do 82.7 0.57 1.2E-05 27.5 0.7 15 61-75 11-25 (296)
263 cd05578 STKc_Yank1 Catalytic d 82.6 0.79 1.7E-05 26.2 1.2 21 61-81 6-27 (258)
264 cd06623 PKc_MAPKK_plant_like C 82.6 0.81 1.8E-05 26.1 1.3 21 61-81 7-28 (264)
265 KOG0579 Ste20-like serine/thre 82.4 0.33 7.2E-06 33.0 -0.4 17 62-78 39-55 (1187)
266 cd06647 STKc_PAK_I Catalytic d 82.1 0.91 2E-05 26.7 1.4 20 61-80 25-45 (293)
267 cd05098 PTKc_FGFR1 Catalytic d 82.0 0.75 1.6E-05 27.2 1.0 16 61-76 24-39 (307)
268 PF09919 DUF2149: Uncharacteri 81.9 0.92 2E-05 22.7 1.1 17 64-82 71-88 (92)
269 cd06630 STKc_MEKK1 Catalytic d 81.8 1.1 2.3E-05 25.7 1.6 21 61-81 6-27 (268)
270 KOG0577 Serine/threonine prote 81.8 1.3 2.9E-05 30.0 2.1 23 61-83 32-55 (948)
271 cd05093 PTKc_TrkB Catalytic do 81.8 0.82 1.8E-05 26.7 1.1 16 61-76 11-26 (288)
272 cd06654 STKc_PAK1 Catalytic do 81.7 0.93 2E-05 26.7 1.3 21 61-81 26-47 (296)
273 cd05122 PKc_STE Catalytic doma 81.5 1 2.2E-05 25.3 1.4 21 61-81 6-27 (253)
274 cd08222 STKc_Nek11 Catalytic d 81.2 0.97 2.1E-05 25.9 1.3 17 61-77 6-22 (260)
275 cd07834 STKc_MAPK Catalytic do 81.0 1.1 2.3E-05 26.8 1.4 22 61-82 6-28 (330)
276 cd06658 STKc_PAK5 Catalytic do 80.8 1.4 2.9E-05 26.0 1.8 21 61-81 28-49 (292)
277 KOG1026 Nerve growth factor re 80.6 0.51 1.1E-05 32.2 -0.1 18 61-78 492-509 (774)
278 cd05583 STKc_MSK_N N-terminal 79.9 1 2.2E-05 26.3 1.0 16 61-76 6-21 (288)
279 cd05055 PTKc_PDGFR Catalytic d 79.7 0.92 2E-05 26.9 0.9 16 61-76 41-56 (302)
280 KOG0592 3-phosphoinositide-dep 79.3 1.4 3.1E-05 29.1 1.6 20 57-76 73-94 (604)
281 KOG1235 Predicted unusual prot 79.2 1.5 3.3E-05 28.8 1.7 23 61-83 167-189 (538)
282 cd07851 STKc_p38 Catalytic dom 79.0 1.5 3.3E-05 26.5 1.6 21 61-81 21-42 (343)
283 cd06648 STKc_PAK_II Catalytic 78.7 1.3 2.9E-05 25.9 1.3 20 61-80 25-45 (285)
284 KOG0667 Dual-specificity tyros 78.5 1.1 2.5E-05 29.7 1.0 23 61-83 192-215 (586)
285 cd07850 STKc_JNK Catalytic dom 78.4 1.7 3.7E-05 26.3 1.7 22 61-82 22-44 (353)
286 KOG0583 Serine/threonine prote 78.3 1.7 3.8E-05 27.1 1.8 22 61-82 23-45 (370)
287 cd06655 STKc_PAK2 Catalytic do 78.3 1.6 3.6E-05 25.7 1.6 22 61-82 25-47 (296)
288 cd05101 PTKc_FGFR2 Catalytic d 78.0 1.3 2.8E-05 26.1 1.1 16 61-76 21-36 (304)
289 cd05099 PTKc_FGFR4 Catalytic d 77.6 1.3 2.8E-05 26.3 1.0 16 61-76 18-33 (314)
290 cd06628 STKc_MAPKKK_Byr2_like 77.4 1.7 3.6E-05 24.9 1.5 17 61-77 6-22 (267)
291 cd07857 STKc_MPK1 Catalytic do 77.3 1.8 4E-05 25.9 1.7 17 61-77 6-22 (332)
292 KOG0660 Mitogen-activated prot 77.1 2.1 4.6E-05 26.7 1.8 23 61-83 28-51 (359)
293 KOG1989 ARK protein kinase fam 76.8 1.5 3.2E-05 30.0 1.2 19 61-79 43-61 (738)
294 cd06627 STKc_Cdc7_like Catalyt 76.8 1.6 3.5E-05 24.6 1.3 17 61-77 6-22 (254)
295 cd05609 STKc_MAST Catalytic do 76.7 1.6 3.5E-05 25.8 1.3 17 61-77 7-23 (305)
296 cd06621 PKc_MAPKK_Pek1_like Ca 76.7 1.5 3.3E-05 25.6 1.2 18 61-78 7-24 (287)
297 cd05100 PTKc_FGFR3 Catalytic d 76.6 1.5 3.2E-05 26.3 1.1 16 61-76 18-33 (334)
298 cd08220 STKc_Nek8 Catalytic do 76.1 1.7 3.7E-05 24.7 1.2 17 61-77 6-22 (256)
299 cd05094 PTKc_TrkC Catalytic do 75.6 1.4 3E-05 25.8 0.8 16 61-76 11-26 (291)
300 KOG1151 Tousled-like protein k 75.5 0.55 1.2E-05 30.6 -0.9 15 61-75 469-483 (775)
301 cd08530 STKc_CNK2-like Catalyt 75.0 2.1 4.6E-05 24.2 1.4 20 61-80 6-26 (256)
302 cd08219 STKc_Nek3 Catalytic do 74.9 2.1 4.6E-05 24.4 1.4 17 61-77 6-22 (255)
303 cd08215 STKc_Nek Catalytic dom 74.6 2.1 4.6E-05 24.2 1.4 17 61-77 6-22 (258)
304 cd08223 STKc_Nek4 Catalytic do 74.4 2 4.4E-05 24.4 1.3 18 61-78 6-23 (257)
305 KOG0584 Serine/threonine prote 74.1 1.5 3.2E-05 29.3 0.7 23 60-82 45-68 (632)
306 PHA03207 serine/threonine kina 74.0 3.1 6.7E-05 25.8 2.1 16 61-76 98-113 (392)
307 cd05080 PTKc_Tyk2_rpt2 Catalyt 73.9 1.5 3.3E-05 25.5 0.7 15 61-75 10-24 (283)
308 PF10577 UPF0560: Uncharacteri 72.5 4.5 9.8E-05 28.0 2.6 9 12-20 290-298 (807)
309 KOG0986 G protein-coupled rece 71.2 1.5 3.2E-05 28.7 0.2 20 58-77 186-207 (591)
310 KOG4279 Serine/threonine prote 69.7 2.1 4.6E-05 29.7 0.7 15 62-76 582-596 (1226)
311 PTZ00266 NIMA-related protein 68.8 3.6 7.8E-05 29.3 1.6 17 61-77 19-35 (1021)
312 KOG0669 Cyclin T-dependent kin 68.1 0.72 1.6E-05 27.9 -1.5 18 61-78 23-40 (376)
313 PF05083 LST1: LST-1 protein; 68.0 12 0.00026 17.8 2.9 14 9-22 9-22 (74)
314 TIGR02976 phageshock_pspB phag 67.2 13 0.00028 17.9 3.1 6 18-23 24-29 (75)
315 PRK10345 hypothetical protein; 67.2 2.9 6.3E-05 24.0 0.8 13 61-73 8-20 (210)
316 PF02009 Rifin_STEVOR: Rifin/s 66.4 6.6 0.00014 24.1 2.2 17 12-28 270-286 (299)
317 cd06613 STKc_MAP4K3_like Catal 66.2 4.9 0.00011 22.9 1.7 17 61-77 9-25 (262)
318 TIGR02205 septum_zipA cell div 66.2 4.7 0.0001 24.5 1.6 18 4-21 7-24 (284)
319 PF06667 PspB: Phage shock pro 66.2 14 0.0003 17.9 3.3 8 17-24 23-30 (75)
320 cd08221 STKc_Nek9 Catalytic do 64.5 4.6 9.9E-05 23.0 1.3 16 61-76 6-21 (256)
321 KOG0596 Dual specificity; seri 64.4 5.9 0.00013 26.7 1.9 22 61-82 367-388 (677)
322 COG4744 Uncharacterized conser 64.0 17 0.00038 19.0 3.2 18 62-81 89-109 (121)
323 cd08226 PK_STRAD_beta Pseudoki 62.5 6.3 0.00014 23.6 1.7 20 64-83 9-29 (328)
324 PTZ00267 NIMA-related protein 60.7 4.3 9.3E-05 26.0 0.8 17 61-77 73-89 (478)
325 KOG0664 Nemo-like MAPK-related 60.5 5.7 0.00012 24.5 1.2 22 61-82 59-81 (449)
326 KOG1027 Serine/threonine prote 59.3 7.5 0.00016 27.3 1.7 22 61-83 515-537 (903)
327 COG2112 Predicted Ser/Thr prot 59.0 7.2 0.00016 22.4 1.4 20 61-80 28-47 (201)
328 PRK09458 pspB phage shock prot 58.7 19 0.0004 17.5 2.6 7 18-24 24-30 (75)
329 KOG0690 Serine/threonine prote 58.2 8.7 0.00019 24.4 1.8 19 57-75 168-188 (516)
330 KOG4258 Insulin/growth factor 58.0 6.7 0.00014 27.7 1.3 16 61-76 1000-1015(1025)
331 KOG0610 Putative serine/threon 57.8 13 0.00029 24.1 2.5 18 61-78 83-100 (459)
332 KOG0582 Ste20-like serine/thre 56.6 5.2 0.00011 26.1 0.7 23 61-83 32-55 (516)
333 cd08227 PK_STRAD_alpha Pseudok 55.4 8.3 0.00018 23.1 1.4 20 64-83 9-29 (327)
334 PRK14051 negative regulator Gr 55.4 6.4 0.00014 20.4 0.8 19 61-79 29-47 (123)
335 KOG0612 Rho-associated, coiled 55.2 12 0.00027 27.4 2.2 21 57-77 75-97 (1317)
336 TIGR01624 LRP1_Cterm LRP1 C-te 53.9 11 0.00023 16.6 1.2 10 69-78 38-47 (50)
337 KOG4645 MAPKKK (MAP kinase kin 53.9 5.5 0.00012 29.4 0.5 22 61-82 1241-1263(1509)
338 PTZ00046 rifin; Provisional 53.3 22 0.00049 22.5 2.9 16 13-28 330-345 (358)
339 TIGR01477 RIFIN variant surfac 52.8 23 0.0005 22.4 2.9 16 13-28 325-340 (353)
340 KOG4721 Serine/threonine prote 52.5 15 0.00033 25.2 2.2 20 61-80 130-149 (904)
341 KOG0033 Ca2+/calmodulin-depend 52.5 1.6 3.6E-05 26.4 -1.8 20 61-80 17-37 (355)
342 KOG0984 Mitogen-activated prot 52.0 7.4 0.00016 23.1 0.8 23 61-83 52-75 (282)
343 COG3115 ZipA Cell division pro 51.9 19 0.00042 22.2 2.4 18 4-21 9-26 (324)
344 KOG1094 Discoidin domain recep 51.3 13 0.00028 25.5 1.8 23 61-83 544-566 (807)
345 PF05142 DUF702: Domain of unk 49.7 11 0.00023 20.9 1.1 10 69-78 139-148 (154)
346 KOG1165 Casein kinase (serine/ 48.5 9.5 0.00021 24.3 0.9 23 61-83 34-57 (449)
347 KOG0983 Mitogen-activated prot 48.2 19 0.00041 22.4 2.0 22 61-82 98-120 (391)
348 PHA03240 envelope glycoprotein 47.8 22 0.00047 21.0 2.2 6 13-18 226-231 (258)
349 KOG0200 Fibroblast/platelet-de 47.3 12 0.00027 25.0 1.3 17 61-77 302-318 (609)
350 PF15345 TMEM51: Transmembrane 45.6 18 0.0004 21.4 1.7 7 48-54 126-132 (233)
351 KOG4158 BRPK/PTEN-induced prot 45.2 5.5 0.00012 25.9 -0.5 29 45-78 152-180 (598)
352 PHA03265 envelope glycoprotein 44.8 19 0.0004 22.9 1.7 7 16-22 368-374 (402)
353 PRK03427 cell division protein 44.0 36 0.00077 21.4 2.8 16 5-20 11-26 (333)
354 PRK01723 3-deoxy-D-manno-octul 42.9 19 0.00041 21.0 1.5 21 61-81 37-58 (239)
355 COG0478 RIO-like serine/threon 42.7 18 0.00039 22.3 1.4 22 61-82 97-118 (304)
356 cd03690 Tet_II Tet_II: This su 42.1 10 0.00022 18.3 0.3 20 63-82 17-36 (85)
357 KOG1236 Predicted unusual prot 42.1 6 0.00013 25.9 -0.6 23 55-77 188-211 (565)
358 PF05337 CSF-1: Macrophage col 41.1 8.9 0.00019 23.3 0.0 12 12-23 242-253 (285)
359 KOG4278 Protein tyrosine kinas 39.9 18 0.00038 25.3 1.2 18 61-78 273-290 (1157)
360 KOG0576 Mitogen-activated prot 39.8 9.1 0.0002 26.4 -0.1 16 61-76 21-36 (829)
361 KOG0607 MAP kinase-interacting 39.6 58 0.0012 20.9 3.2 25 48-75 74-98 (463)
362 PRK01741 cell division protein 39.5 31 0.00067 21.7 2.0 17 4-20 8-24 (332)
363 PHA00451 protein kinase 39.1 24 0.00052 21.8 1.5 20 61-80 71-90 (362)
364 KOG0696 Serine/threonine prote 39.0 13 0.00027 24.5 0.4 16 61-76 355-370 (683)
365 PF13095 FTA2: Kinetochore Sim 38.9 26 0.00057 20.4 1.6 19 61-79 43-62 (207)
366 PRK04335 cell division protein 38.7 30 0.00066 21.5 2.0 18 4-21 9-26 (313)
367 TIGR03803 Gloeo_Verruco Gloeo_ 38.5 25 0.00054 14.2 1.1 13 64-76 12-24 (34)
368 KOG0615 Serine/threonine prote 37.6 25 0.00055 22.9 1.5 23 61-83 178-201 (475)
369 PHA03030 hypothetical protein; 36.9 53 0.0011 17.0 2.3 16 6-21 7-22 (122)
370 PF11694 DUF3290: Protein of u 36.3 78 0.0017 17.4 3.3 8 69-76 116-123 (149)
371 PHA03281 envelope glycoprotein 35.5 89 0.0019 21.3 3.7 20 57-76 618-637 (642)
372 PRK12274 serine/threonine prot 34.7 30 0.00066 20.3 1.5 19 61-79 8-26 (218)
373 cd04088 EFG_mtEFG_II EFG_mtEFG 34.4 18 0.0004 17.1 0.5 19 63-81 14-32 (83)
374 KOG3482 Small nuclear ribonucl 33.6 32 0.00069 16.5 1.2 11 66-76 25-35 (79)
375 cd04090 eEF2_II_snRNP Loc2 eEF 32.6 24 0.00052 17.3 0.8 16 67-82 19-34 (94)
376 PHA03286 envelope glycoprotein 32.1 54 0.0012 21.7 2.3 12 69-80 471-482 (492)
377 cd04092 mtEFG2_II_like mtEFG2_ 32.0 22 0.00048 16.9 0.6 20 63-82 14-33 (83)
378 PF02158 Neuregulin: Neureguli 31.1 16 0.00035 23.3 0.0 6 5-10 16-21 (404)
379 KOG2345 Serine/threonine prote 30.8 31 0.00068 21.1 1.1 15 61-75 27-41 (302)
380 PF13511 DUF4124: Domain of un 30.7 42 0.0009 14.8 1.3 13 69-81 13-25 (60)
381 KOG4550 Predicted membrane pro 30.5 28 0.00061 22.9 1.0 9 17-25 581-589 (606)
382 cd03700 eEF2_snRNP_like_II EF2 30.4 26 0.00057 17.1 0.7 18 64-81 16-33 (93)
383 KOG0671 LAMMER dual specificit 29.9 52 0.0011 21.3 2.0 16 61-76 95-110 (415)
384 PF12451 VPS11_C: Vacuolar pro 29.4 38 0.00082 14.8 1.0 19 50-68 26-47 (49)
385 PF07423 DUF1510: Protein of u 29.2 72 0.0016 18.8 2.4 10 48-57 151-160 (217)
386 KOG0616 cAMP-dependent protein 29.0 52 0.0011 20.7 1.8 16 61-76 50-65 (355)
387 cd03699 lepA_II lepA_II: This 28.9 25 0.00055 16.9 0.5 19 63-81 14-32 (86)
388 COG0515 SPS1 Serine/threonine 27.1 46 0.00099 19.0 1.4 15 62-76 7-21 (384)
389 KOG1345 Serine/threonine kinas 26.6 1E+02 0.0022 19.5 2.7 17 61-77 30-46 (378)
390 PF15013 CCSMST1: CCSMST1 fami 26.3 73 0.0016 15.5 1.8 6 11-16 41-46 (77)
391 PRK10359 lipopolysaccharide co 26.1 47 0.001 19.6 1.3 16 61-76 37-52 (232)
392 cd03689 RF3_II RF3_II: this su 25.9 29 0.00064 16.8 0.4 18 64-81 16-33 (85)
393 KOG0578 p21-activated serine/t 25.9 54 0.0012 22.1 1.6 22 61-82 279-301 (550)
394 KOG0585 Ca2+/calmodulin-depend 24.8 60 0.0013 21.9 1.7 22 61-82 103-125 (576)
395 PRK15449 ferredoxin-like prote 24.3 48 0.001 16.8 1.0 9 65-73 85-93 (95)
396 KOG4056 Translocase of outer m 23.8 1.1E+02 0.0023 16.9 2.2 7 11-17 20-26 (143)
397 PF13019 Telomere_Sde2: Telome 23.4 11 0.00024 21.0 -1.5 14 62-75 86-99 (162)
398 COG0545 FkpA FKBP-type peptidy 23.0 56 0.0012 19.1 1.2 12 71-82 125-136 (205)
399 KOG2849 Placental protein 11 [ 22.8 78 0.0017 20.3 1.8 21 61-81 256-276 (388)
400 KOG0587 Traf2- and Nck-interac 22.8 23 0.0005 25.3 -0.4 20 61-80 25-45 (953)
401 KOG4616 Mitochondrial ribosoma 22.5 69 0.0015 16.7 1.4 38 45-82 31-70 (137)
402 KOG0611 Predicted serine/threo 21.6 50 0.0011 21.9 0.9 23 61-83 59-82 (668)
403 PF14531 Kinase-like: Kinase-l 20.6 49 0.0011 20.3 0.7 21 61-81 18-39 (288)
404 PF12297 EVC2_like: Ellis van 20.3 1.3E+02 0.0029 19.7 2.5 8 3-10 69-76 (429)
405 PRK14780 lipoprotein signal pe 20.2 1.9E+02 0.0042 17.7 3.0 12 42-53 250-261 (263)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10 E-value=7.2e-11 Score=71.27 Aligned_cols=41 Identities=44% Similarity=0.882 Sum_probs=37.2
Q ss_pred CCceeeHHHHHHHhhhHh--hhhccCCCceeeeeEeCCCcccC
Q 047075 43 SPKRYGYADIKKMTNSFK--YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 43 ~~~~~~~~~l~~~t~~f~--~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
....|+++++..||++|+ +.||+|+||+||||.+++|..||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vA 103 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVA 103 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEE
Confidence 567799999999999999 89999999999999999986554
No 2
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.06 E-value=5.9e-06 Score=51.59 Aligned_cols=22 Identities=41% Similarity=0.696 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEeCCCcccC
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
.+||+|+||.||||.|.+ +.||
T Consensus 216 eli~~Grfg~V~KaqL~~-~~VA 237 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDN-RLVA 237 (534)
T ss_pred HHhhcCccceeehhhccC-ceeE
Confidence 689999999999999965 4443
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.85 E-value=4.5e-05 Score=51.20 Aligned_cols=22 Identities=32% Similarity=0.549 Sum_probs=18.3
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
++||+|+||.||+|.. ++|..+
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~v 718 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQF 718 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEE
Confidence 7899999999999987 456544
No 4
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.68 E-value=4.2e-05 Score=51.07 Aligned_cols=22 Identities=50% Similarity=0.910 Sum_probs=18.8
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
.+||+|.||+||||.+ |+|+.|
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~v 724 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENV 724 (1177)
T ss_pred ceeccccceeEEeeeEecCCcee
Confidence 6899999999999987 887643
No 5
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=96.94 E-value=0.00053 Score=45.78 Aligned_cols=33 Identities=27% Similarity=0.523 Sum_probs=27.7
Q ss_pred CceeeHHHHHHHhhhHh-----------hhhccCCCceeeeeEe
Q 047075 44 PKRYGYADIKKMTNSFK-----------YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 44 ~~~~~~~~l~~~t~~f~-----------~~ig~g~~g~vYk~~l 76 (83)
...++|||-..|...|. .+||.|.||.||+|.|
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrL 650 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRL 650 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccc
Confidence 34578898888887775 4799999999999998
No 6
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.33 E-value=0.0014 Score=41.89 Aligned_cols=21 Identities=33% Similarity=0.765 Sum_probs=17.7
Q ss_pred hhhHh--hhhccCCCceeeeeEe
Q 047075 56 TNSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 56 t~~f~--~~ig~g~~g~vYk~~l 76 (83)
.++|. +.||+|+||+||+|..
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~ 166 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLR 166 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEe
Confidence 44566 7999999999999975
No 7
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=96.24 E-value=0.002 Score=39.34 Aligned_cols=23 Identities=39% Similarity=0.694 Sum_probs=18.4
Q ss_pred hhhccCCCceeeeeEeC-CCcccC
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~vA 83 (83)
+++|.|+||.||+|.+. .++.||
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vA 53 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVA 53 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeE
Confidence 68999999999999984 344444
No 8
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=96.14 E-value=0.0055 Score=37.12 Aligned_cols=23 Identities=52% Similarity=0.826 Sum_probs=18.6
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
+.+|+|+||+||||.- .+|+.||
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VA 40 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVA 40 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEE
Confidence 6799999999999987 4565554
No 9
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.97 E-value=0.0077 Score=38.11 Aligned_cols=19 Identities=26% Similarity=0.693 Sum_probs=16.4
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
+.||+|.||.|.+|.+.++
T Consensus 217 e~IGkGRyGEVwrG~wrGe 235 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRGE 235 (513)
T ss_pred EEecCccccceeeccccCC
Confidence 6899999999999998443
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.95 E-value=0.0068 Score=36.53 Aligned_cols=23 Identities=57% Similarity=0.989 Sum_probs=19.3
Q ss_pred hhhccCCCceeeeeE-eCCCcccC
Q 047075 61 YKLGQGGYGSVYKGK-LLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~-l~~g~~vA 83 (83)
..||+|+||+|||+. +++|..+|
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a 48 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVA 48 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhh
Confidence 689999999999975 57887665
No 11
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=95.91 E-value=0.004 Score=40.61 Aligned_cols=16 Identities=38% Similarity=1.088 Sum_probs=15.1
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||+||+|.+
T Consensus 398 ~rIGsGsFGtV~Rg~w 413 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRW 413 (678)
T ss_pred ceeccccccceeeccc
Confidence 7899999999999987
No 12
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=95.81 E-value=0.0058 Score=38.07 Aligned_cols=23 Identities=39% Similarity=0.781 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEeC-CCcccC
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~vA 83 (83)
..||+|+|++||||... ++..||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VA 39 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVA 39 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEE
Confidence 46999999999999984 455554
No 13
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=95.77 E-value=0.0025 Score=36.74 Aligned_cols=27 Identities=30% Similarity=0.428 Sum_probs=21.0
Q ss_pred HHHHhhhHh--hhhccCCCceeeeeEeCC
Q 047075 52 IKKMTNSFK--YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 52 l~~~t~~f~--~~ig~g~~g~vYk~~l~~ 78 (83)
++.++++++ ..||+|++|.||+|...+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~ 31 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLS 31 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecC
Confidence 344566666 689999999999998753
No 14
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=95.72 E-value=0.0045 Score=40.45 Aligned_cols=16 Identities=44% Similarity=0.978 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||||.=
T Consensus 8 e~iG~Gsfg~VYKgrr 23 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRR 23 (808)
T ss_pred HHhcCCccceeeeccc
Confidence 7899999999999975
No 15
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=95.71 E-value=0.0041 Score=40.25 Aligned_cols=23 Identities=43% Similarity=0.902 Sum_probs=18.7
Q ss_pred hhhHh--hhhccCCCceeeeeEeCC
Q 047075 56 TNSFK--YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 56 t~~f~--~~ig~g~~g~vYk~~l~~ 78 (83)
.++|. +.||+|+||.||+|...+
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~ 155 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVN 155 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcC
Confidence 34455 789999999999999854
No 16
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=95.57 E-value=0.011 Score=32.90 Aligned_cols=23 Identities=35% Similarity=0.427 Sum_probs=19.6
Q ss_pred hhhccCCCceeeeeEeCCCcccC
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
+.||+|++|.||++..++|+.+|
T Consensus 21 ~~i~~G~~g~Vy~~~~~~g~~va 43 (198)
T cd05144 21 NQIGVGKESDVYLALDPDGNPVA 43 (198)
T ss_pred CccccCcceEEEEEEcCCCCEEE
Confidence 68999999999999988776543
No 17
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=95.40 E-value=0.0075 Score=34.74 Aligned_cols=24 Identities=38% Similarity=0.743 Sum_probs=18.8
Q ss_pred HhhhHh--hhhccCCCceeeeeEeCC
Q 047075 55 MTNSFK--YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 55 ~t~~f~--~~ig~g~~g~vYk~~l~~ 78 (83)
+++.|. +.||+|++|.||+|...+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~ 29 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVK 29 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcC
Confidence 444555 789999999999998743
No 18
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=95.34 E-value=0.0055 Score=35.58 Aligned_cols=36 Identities=19% Similarity=0.439 Sum_probs=26.6
Q ss_pred eeeHHHHHHHhhhHh--hhhccCCCceeeeeEeC-CCcc
Q 047075 46 RYGYADIKKMTNSFK--YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 46 ~~~~~~l~~~t~~f~--~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
.+.++++.+++++|. ..||+|++|.||++... +++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~ 45 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSK 45 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCce
Confidence 345566666777777 78999999999999874 3443
No 19
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=95.33 E-value=0.01 Score=36.51 Aligned_cols=20 Identities=35% Similarity=0.780 Sum_probs=16.7
Q ss_pred hhHh--hhhccCCCceeeeeEe
Q 047075 57 NSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l 76 (83)
+.|. |.|++|+||.||+|.-
T Consensus 76 ~efe~lnrI~EGtyGiVYRakd 97 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKD 97 (419)
T ss_pred HHHHHHhhcccCcceeEEEecc
Confidence 3455 8999999999999975
No 20
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=95.26 E-value=0.01 Score=30.90 Aligned_cols=26 Identities=31% Similarity=0.480 Sum_probs=22.0
Q ss_pred hHh-hhhccCCCceeeeeEeCCCcccC
Q 047075 58 SFK-YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 58 ~f~-~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
.|+ +-++.++.|.||+|++.+|+.||
T Consensus 13 ~fd~~PlasASiaQVh~a~l~~g~~Va 39 (119)
T PF03109_consen 13 EFDPEPLASASIAQVHRARLKDGEEVA 39 (119)
T ss_pred HCCcchhhheehhhheeeeecccchhh
Confidence 355 68999999999999999888764
No 21
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.25 E-value=0.013 Score=37.63 Aligned_cols=23 Identities=48% Similarity=0.794 Sum_probs=18.7
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
+.||+|+||.||||.= ..|+.||
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivA 146 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVA 146 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEE
Confidence 6899999999999964 5666654
No 22
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=95.21 E-value=0.0091 Score=37.57 Aligned_cols=23 Identities=30% Similarity=0.524 Sum_probs=20.5
Q ss_pred hhhccCCCceeeeeEeCCCcccC
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
+.+++|++|.||+|++.+|+.||
T Consensus 123 ~plasaSigQVh~A~l~~G~~Va 145 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVA 145 (437)
T ss_pred cceeeeehhheEEEEecCCCEEE
Confidence 57999999999999999998764
No 23
>PTZ00284 protein kinase; Provisional
Probab=95.04 E-value=0.0043 Score=38.93 Aligned_cols=28 Identities=29% Similarity=0.350 Sum_probs=20.6
Q ss_pred HhhhHh--hhhccCCCceeeeeEeC-CCccc
Q 047075 55 MTNSFK--YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 55 ~t~~f~--~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
.++.|. +.||+|+||+||++... .++.+
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~v 157 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYC 157 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEE
Confidence 345565 68999999999999874 34444
No 24
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=94.99 E-value=0.012 Score=35.77 Aligned_cols=23 Identities=43% Similarity=0.621 Sum_probs=18.8
Q ss_pred hhhccCCCceeeeeEeC-CCcccC
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~vA 83 (83)
..+|+|+||+|||+.-. .|+.||
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVA 31 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVA 31 (396)
T ss_pred hccccCcceEEEEeccCCcccEEE
Confidence 47899999999999874 477665
No 25
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=94.96 E-value=0.012 Score=33.74 Aligned_cols=22 Identities=36% Similarity=0.596 Sum_probs=18.8
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||+|++|.||++..++++.+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~ 33 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKV 33 (260)
T ss_pred eeeccCccceEEeeecCCCceE
Confidence 6899999999999998776654
No 26
>PHA02882 putative serine/threonine kinase; Provisional
Probab=94.96 E-value=0.015 Score=34.19 Aligned_cols=19 Identities=32% Similarity=0.676 Sum_probs=16.2
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
..||+|+||+||+|...+.
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~ 36 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASD 36 (294)
T ss_pred eEEecCCCceEEEEEEcCC
Confidence 6899999999999987543
No 27
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=94.87 E-value=0.019 Score=34.26 Aligned_cols=23 Identities=52% Similarity=0.839 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..+|+|.||.||||.- ..|+.||
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VA 31 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVA 31 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEE
Confidence 5789999999999975 4566554
No 28
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=94.70 E-value=0.016 Score=33.19 Aligned_cols=22 Identities=36% Similarity=0.655 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||+|++|.||+|..+++..+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v 33 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKV 33 (261)
T ss_pred eecCCcCCceEEEEEecCCceE
Confidence 6889999999999998765543
No 29
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=94.69 E-value=0.0056 Score=35.71 Aligned_cols=35 Identities=31% Similarity=0.576 Sum_probs=26.4
Q ss_pred eeHHHHHHHhhhHh--hhhccCCCceeeeeEeC-CCcc
Q 047075 47 YGYADIKKMTNSFK--YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 47 ~~~~~l~~~t~~f~--~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
++.+++.+++++|. +.+|+|++|.||++... +++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~ 49 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSL 49 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCE
Confidence 44556666777787 78999999999999874 4443
No 30
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=94.68 E-value=0.018 Score=32.79 Aligned_cols=17 Identities=41% Similarity=0.837 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|.+|+|+||.-.
T Consensus 8 ekigegtygtvfkarn~ 24 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNR 24 (292)
T ss_pred HhhcCCcceeeEecccC
Confidence 58999999999999753
No 31
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.60 E-value=0.02 Score=36.13 Aligned_cols=16 Identities=38% Similarity=0.704 Sum_probs=14.9
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|.||.||||.-
T Consensus 19 ~~IgrGsfG~Vyk~~d 34 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAID 34 (467)
T ss_pred hhccccccceeeeeee
Confidence 6899999999999986
No 32
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=94.45 E-value=0.022 Score=34.28 Aligned_cols=22 Identities=36% Similarity=0.579 Sum_probs=17.6
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|... +|+.+
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~v 43 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKV 43 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEE
Confidence 78999999999999863 45544
No 33
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=94.43 E-value=0.02 Score=33.47 Aligned_cols=22 Identities=32% Similarity=0.641 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+.||+|+||.||++.. .+|+.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~ 28 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMY 28 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceE
Confidence 4689999999999987 456544
No 34
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=94.41 E-value=0.028 Score=32.19 Aligned_cols=22 Identities=36% Similarity=0.607 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||.|++|.||+|...++..+
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~ 33 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRV 33 (261)
T ss_pred hhhccCCCccEEEeEecCCCcE
Confidence 7899999999999998665443
No 35
>PRK09188 serine/threonine protein kinase; Provisional
Probab=94.27 E-value=0.022 Score=35.19 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC--CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL--DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~--~g~~ 81 (83)
+.||+|+||+||+|... +|+.
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~ 46 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTA 46 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeE
Confidence 68999999999999874 4544
No 36
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=94.21 E-value=0.024 Score=32.88 Aligned_cols=34 Identities=29% Similarity=0.642 Sum_probs=23.6
Q ss_pred eHHHHHHHhhhHh--hhhccCCCceeeeeEeC-CCcc
Q 047075 48 GYADIKKMTNSFK--YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 48 ~~~~l~~~t~~f~--~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
++.++..+.+.|. ..+|.|+||.||+|... +++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~ 43 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQL 43 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcE
Confidence 3444444555565 68999999999999874 3443
No 37
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=94.18 E-value=0.0075 Score=36.76 Aligned_cols=23 Identities=48% Similarity=0.622 Sum_probs=19.2
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..+|+|+||.|||+.- ..|+++|
T Consensus 39 ~KLGEGSYGSV~KAIH~EsG~v~A 62 (502)
T KOG0574|consen 39 GKLGEGSYGSVHKAIHRESGHVLA 62 (502)
T ss_pred HHhcCCcchHHHHHHHhccCcEEE
Confidence 6889999999999987 4677664
No 38
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=93.94 E-value=0.035 Score=31.94 Aligned_cols=17 Identities=35% Similarity=0.767 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||+|...
T Consensus 10 ~~lg~g~~g~vy~~~~~ 26 (266)
T cd05033 10 KVIGGGEFGEVCRGRLK 26 (266)
T ss_pred eEecCCccceEEEEEEc
Confidence 78999999999999884
No 39
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=93.94 E-value=0.026 Score=32.60 Aligned_cols=17 Identities=35% Similarity=0.665 Sum_probs=15.1
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||+|.+.
T Consensus 11 ~~ig~G~fg~V~~~~~~ 27 (266)
T cd05064 11 RILGTGRFGELCRGCLK 27 (266)
T ss_pred eeecccCCCeEEEEEEe
Confidence 68999999999999763
No 40
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=93.94 E-value=0.046 Score=31.33 Aligned_cols=22 Identities=36% Similarity=0.659 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||+|++|.||++..+++..+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~ 33 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKV 33 (260)
T ss_pred heeccccCceEEEEEecCCcee
Confidence 6899999999999988765543
No 41
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=93.85 E-value=0.031 Score=32.01 Aligned_cols=21 Identities=33% Similarity=0.604 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeCCCcc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~ 81 (83)
..||+|++|.||++...++..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~ 32 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTK 32 (261)
T ss_pred eeeccCcceEEEEEEEcCCce
Confidence 678999999999998765543
No 42
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=93.83 E-value=0.033 Score=32.59 Aligned_cols=22 Identities=32% Similarity=0.626 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||+||++... +++.+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~ 28 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMY 28 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEE
Confidence 46899999999999873 45443
No 43
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=93.83 E-value=0.059 Score=32.59 Aligned_cols=22 Identities=36% Similarity=0.519 Sum_probs=17.7
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||+||++... +|+.+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~v 102 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLY 102 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEE
Confidence 68999999999999864 45544
No 44
>smart00090 RIO RIO-like kinase.
Probab=93.82 E-value=0.034 Score=32.23 Aligned_cols=23 Identities=22% Similarity=0.198 Sum_probs=19.2
Q ss_pred hhhccCCCceeeeeE--eCCCcccC
Q 047075 61 YKLGQGGYGSVYKGK--LLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~--l~~g~~vA 83 (83)
+.||+|++|.||+|. ..+|+.+|
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~va 58 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERA 58 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEE
Confidence 689999999999998 56777653
No 45
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=93.80 E-value=0.12 Score=27.24 Aligned_cols=7 Identities=0% Similarity=-0.634 Sum_probs=2.6
Q ss_pred HHHHHhh
Q 047075 17 RRKFSSY 23 (83)
Q Consensus 17 ~~~~~~~ 23 (83)
++++|++
T Consensus 86 y~irR~~ 92 (122)
T PF01102_consen 86 YCIRRLR 92 (122)
T ss_dssp HHHHHHS
T ss_pred HHHHHHh
Confidence 3333333
No 46
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=93.75 E-value=0.038 Score=32.80 Aligned_cols=17 Identities=47% Similarity=0.946 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||+||+|...
T Consensus 13 ~~lg~G~~g~Vy~~~~~ 29 (316)
T cd05108 13 KVLGSGAFGTVYKGLWI 29 (316)
T ss_pred eeeecCCCceEEEEEEe
Confidence 68999999999999863
No 47
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=93.71 E-value=0.038 Score=33.80 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||+||++... +++.+
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~ 29 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALY 29 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEE
Confidence 46899999999999763 44443
No 48
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=93.71 E-value=0.041 Score=31.61 Aligned_cols=22 Identities=41% Similarity=0.733 Sum_probs=17.9
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||.|+||.||+|..++|+.+
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~ 27 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLI 27 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeE
Confidence 4689999999999987766644
No 49
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=93.68 E-value=0.076 Score=32.80 Aligned_cols=22 Identities=36% Similarity=0.474 Sum_probs=17.8
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+.||+|..|+|||+.. +.+..+
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~ 107 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIY 107 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEE
Confidence 6899999999999988 445443
No 50
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.56 E-value=0.059 Score=34.58 Aligned_cols=23 Identities=52% Similarity=0.725 Sum_probs=18.5
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..+|.|+||+||+|+- ..|+.||
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VA 39 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVA 39 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceee
Confidence 6789999999999986 4566554
No 51
>PTZ00036 glycogen synthase kinase; Provisional
Probab=93.50 E-value=0.037 Score=34.70 Aligned_cols=22 Identities=27% Similarity=0.628 Sum_probs=17.7
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||.||+|... .++.+
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~v 94 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKV 94 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEE
Confidence 68999999999999874 45544
No 52
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=93.45 E-value=0.042 Score=33.10 Aligned_cols=15 Identities=33% Similarity=0.740 Sum_probs=13.9
Q ss_pred hhhccCCCceeeeeE
Q 047075 61 YKLGQGGYGSVYKGK 75 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~ 75 (83)
..||+|+||.||+|.
T Consensus 13 ~~lG~G~fg~V~~~~ 27 (343)
T cd05103 13 KPLGRGAFGQVIEAD 27 (343)
T ss_pred ccccCCccceEEEEe
Confidence 689999999999996
No 53
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=93.45 E-value=0.075 Score=31.90 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||+||++.-. ++..+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~v 43 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKV 43 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEE
Confidence 68999999999999863 44443
No 54
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=93.44 E-value=0.04 Score=31.53 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeCCCcc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~ 81 (83)
..||+|+||.||++...++..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~ 30 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIK 30 (256)
T ss_pred eEecCCcCceEEEEEeccCce
Confidence 578999999999998866543
No 55
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=93.39 E-value=0.043 Score=32.85 Aligned_cols=16 Identities=31% Similarity=0.621 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||+|..
T Consensus 13 ~~lG~G~fg~Vy~~~~ 28 (338)
T cd05102 13 KVLGHGAFGKVVEASA 28 (338)
T ss_pred eEeccCCcceEEEEEE
Confidence 6799999999999974
No 56
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=93.38 E-value=0.067 Score=31.33 Aligned_cols=26 Identities=38% Similarity=0.736 Sum_probs=19.8
Q ss_pred hhHh--hhhccCCCceeeeeEeC-CCccc
Q 047075 57 NSFK--YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
++|. +.+|+|++|.||+|... +|+.+
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v 35 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELV 35 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEE
Confidence 4455 78999999999999985 45443
No 57
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=93.20 E-value=0.04 Score=33.24 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=24.0
Q ss_pred HHHHHHhhhHh--hhhccCCCceeeeeEe-CCCccc
Q 047075 50 ADIKKMTNSFK--YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 50 ~~l~~~t~~f~--~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+++...+++|. ..||+|++|.||++.. .+|+.+
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~v 45 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 45 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEE
Confidence 44555666666 6899999999999986 455544
No 58
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.09 E-value=0.049 Score=37.66 Aligned_cols=23 Identities=43% Similarity=0.785 Sum_probs=20.2
Q ss_pred hhhccCCCceeeeeEeCCCcccC
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
..+|+|++|+||+|.-.+|+.+|
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~a 726 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVA 726 (974)
T ss_pred eeeccccceEEEEeecCCCcEEE
Confidence 68999999999999988887765
No 59
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=93.05 E-value=0.068 Score=33.05 Aligned_cols=18 Identities=50% Similarity=0.888 Sum_probs=15.9
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.+|.|+||+||+|...+
T Consensus 47 ~~iG~G~~g~V~~~~~~g 64 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRG 64 (362)
T ss_pred hhcccCCceeEEEEEeCC
Confidence 579999999999999854
No 60
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=93.04 E-value=0.045 Score=31.33 Aligned_cols=22 Identities=50% Similarity=0.827 Sum_probs=18.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|... +|+.+
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~ 30 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVV 30 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEE
Confidence 68899999999999885 55543
No 61
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=93.04 E-value=0.043 Score=31.50 Aligned_cols=22 Identities=36% Similarity=0.640 Sum_probs=17.9
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||+|++|.||++...+++.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v 33 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPV 33 (261)
T ss_pred EEecccCCccEEEEEecCCeEE
Confidence 6899999999999987655433
No 62
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=93.03 E-value=0.068 Score=31.01 Aligned_cols=20 Identities=50% Similarity=0.914 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEe-CCCc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~ 80 (83)
+.||+|++|+||+|.. ++|+
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~ 33 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGE 33 (279)
T ss_pred eecCCCCCceEEEEEEecCCC
Confidence 6899999999999985 5554
No 63
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=93.02 E-value=0.049 Score=32.56 Aligned_cols=22 Identities=23% Similarity=0.363 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-. +|+.+
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~v 28 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELY 28 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEE
Confidence 57899999999999864 45544
No 64
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=92.92 E-value=0.04 Score=33.19 Aligned_cols=23 Identities=30% Similarity=0.491 Sum_probs=18.4
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..||.|.||+|+|-.. |.|+.+|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mA 93 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMA 93 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEE
Confidence 5799999999999877 5666543
No 65
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=92.90 E-value=0.053 Score=34.65 Aligned_cols=23 Identities=39% Similarity=0.492 Sum_probs=18.2
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
+.||+|+||+||++.. .+|+.+|
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vA 61 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFA 61 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEE
Confidence 6899999999999975 4565543
No 66
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=92.87 E-value=0.071 Score=31.47 Aligned_cols=18 Identities=56% Similarity=0.940 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|+||.||+|...+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~ 24 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKD 24 (317)
T ss_pred eEeccCCCeeEEEEEecC
Confidence 478999999999998754
No 67
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=92.84 E-value=0.11 Score=30.21 Aligned_cols=22 Identities=41% Similarity=0.487 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|+||++... +|+.+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~ 33 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVM 33 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEE
Confidence 68999999999998864 45543
No 68
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=92.78 E-value=0.085 Score=30.73 Aligned_cols=20 Identities=40% Similarity=0.634 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEe-CCCc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~ 80 (83)
+.||+|+||.||+|.. ++|+
T Consensus 13 ~~lg~G~~~~vy~~~~~~~~~ 33 (279)
T cd05111 13 KLLGSGVFGTVHKGIWIPEGD 33 (279)
T ss_pred cccCccCCcceEEEEEcCCCC
Confidence 6899999999999986 3443
No 69
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=92.71 E-value=0.11 Score=31.47 Aligned_cols=7 Identities=0% Similarity=0.188 Sum_probs=2.8
Q ss_pred HHHHhhc
Q 047075 18 RKFSSYN 24 (83)
Q Consensus 18 ~~~~~~~ 24 (83)
+++||++
T Consensus 279 LRYRRKK 285 (299)
T PF02009_consen 279 LRYRRKK 285 (299)
T ss_pred HHHHHHh
Confidence 3444433
No 70
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=92.68 E-value=0.12 Score=34.13 Aligned_cols=26 Identities=50% Similarity=0.834 Sum_probs=20.3
Q ss_pred hHh-hhhccCCCceeeeeEeC-CCcccC
Q 047075 58 SFK-YKLGQGGYGSVYKGKLL-DGRNVA 83 (83)
Q Consensus 58 ~f~-~~ig~g~~g~vYk~~l~-~g~~vA 83 (83)
-|+ +++|+|.||+||-|.-. .|+.||
T Consensus 566 if~devLGSGQFG~VYgg~hRktGrdVA 593 (888)
T KOG4236|consen 566 IFADEVLGSGQFGTVYGGKHRKTGRDVA 593 (888)
T ss_pred hhhHhhccCCcceeeecceecccCceee
Confidence 355 78999999999999873 566554
No 71
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=92.65 E-value=0.048 Score=31.63 Aligned_cols=18 Identities=33% Similarity=0.720 Sum_probs=16.0
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|+||.||+|...+
T Consensus 12 ~~i~~g~~g~V~~~~~~~ 29 (280)
T cd05043 12 DLLQEGTFGRIFYGILID 29 (280)
T ss_pred eeecccCCceEEEEEEec
Confidence 689999999999998754
No 72
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=92.65 E-value=0.062 Score=32.07 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|+||.||++.-.+
T Consensus 6 ~~lg~G~~g~Vy~~~~~~ 23 (323)
T cd05616 6 MVLGKGSFGKVMLAERKG 23 (323)
T ss_pred EEEeeCCCeEEEEEEECC
Confidence 468999999999998743
No 73
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=92.64 E-value=0.12 Score=33.69 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=20.1
Q ss_pred hhhccCCCceeeeeEeCC-CcccC
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~vA 83 (83)
.-+++|++|.||+|.+.+ |+.||
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VA 148 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVV 148 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEE
Confidence 579999999999999987 88664
No 74
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=92.62 E-value=0.067 Score=34.27 Aligned_cols=17 Identities=59% Similarity=1.093 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..+|+|.||.||+|.+.
T Consensus 163 kkLGeGaFGeV~~G~l~ 179 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLK 179 (474)
T ss_pred ceeecccccEEEEEEEE
Confidence 68999999999999984
No 75
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=92.57 E-value=0.067 Score=30.97 Aligned_cols=22 Identities=36% Similarity=0.594 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++... +|+.+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~v 29 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIM 29 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEE
Confidence 46899999999999874 45544
No 76
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=92.55 E-value=0.099 Score=30.95 Aligned_cols=18 Identities=56% Similarity=0.940 Sum_probs=15.4
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|+||+||+|...+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~ 24 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKD 24 (317)
T ss_pred cccccCCCeEEEEEEEcc
Confidence 578999999999998643
No 77
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=92.54 E-value=0.04 Score=33.70 Aligned_cols=23 Identities=17% Similarity=0.434 Sum_probs=18.3
Q ss_pred hhhHh--hhhccCCCceeeeeEeCC
Q 047075 56 TNSFK--YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 56 t~~f~--~~ig~g~~g~vYk~~l~~ 78 (83)
.++|. ..||+|+||.||++...+
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~ 66 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKS 66 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECC
Confidence 34555 789999999999998743
No 78
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=92.52 E-value=0.087 Score=31.03 Aligned_cols=18 Identities=33% Similarity=0.637 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|+||.||++..++
T Consensus 11 ~~lg~G~fg~V~~~~~~~ 28 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVN 28 (304)
T ss_pred eEecccCCeEEEEEEecc
Confidence 578999999999998643
No 79
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=92.46 E-value=0.069 Score=30.66 Aligned_cols=20 Identities=30% Similarity=0.527 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
+.+|+|++|.||++...++.
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~ 31 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHT 31 (260)
T ss_pred eEecCccceEEEEEEecCCc
Confidence 68899999999999876554
No 80
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=92.45 E-value=0.066 Score=32.42 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||+||++.-. +|+.+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~v 29 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIY 29 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEE
Confidence 47899999999999874 45544
No 81
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=92.32 E-value=0.07 Score=31.86 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|+||.||+|...+
T Consensus 6 ~~lg~G~~g~Vy~~~~~~ 23 (324)
T cd05587 6 MVLGKGSFGKVMLAERKG 23 (324)
T ss_pred EEEeeccCeEEEEEEECC
Confidence 468999999999998753
No 82
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=92.30 E-value=0.077 Score=31.03 Aligned_cols=22 Identities=32% Similarity=0.626 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||+||++... +++.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~v 28 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMY 28 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceE
Confidence 46899999999999863 45544
No 83
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=92.25 E-value=0.075 Score=31.88 Aligned_cols=18 Identities=33% Similarity=0.549 Sum_probs=15.7
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|+||.||++...+
T Consensus 7 ~~lG~G~fg~V~~~~~~~ 24 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKN 24 (332)
T ss_pred EEEEeCCCeEEEEEEECC
Confidence 478999999999998854
No 84
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=92.17 E-value=0.086 Score=30.73 Aligned_cols=16 Identities=38% Similarity=0.887 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||++.-
T Consensus 7 ~~lg~G~~g~Vy~~~~ 22 (290)
T cd07862 7 AEIGEGAYGKVFKARD 22 (290)
T ss_pred eEeccCCCeEEEEEEE
Confidence 4689999999999975
No 85
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=92.14 E-value=0.051 Score=33.27 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeCC-Cccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~v 82 (83)
+.||+|+||.||++...+ ++.+
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~ 71 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVY 71 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEE
Confidence 679999999999998743 4433
No 86
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=92.13 E-value=0.078 Score=31.82 Aligned_cols=17 Identities=29% Similarity=0.515 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||++...
T Consensus 7 ~~lG~G~fg~V~~~~~~ 23 (331)
T cd05624 7 KVIGRGAFGEVAVVKMK 23 (331)
T ss_pred EEEeeCCCeEEEEEEEC
Confidence 47899999999999875
No 87
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=92.11 E-value=0.092 Score=29.86 Aligned_cols=22 Identities=50% Similarity=0.800 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|+.. +++.+
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~ 28 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFF 28 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEE
Confidence 46899999999999985 55543
No 88
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=92.09 E-value=0.088 Score=30.84 Aligned_cols=22 Identities=41% Similarity=0.678 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||.|+||+||+|.-. ++..+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~v 33 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLV 33 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEE
Confidence 57899999999999864 34433
No 89
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=91.99 E-value=0.081 Score=31.74 Aligned_cols=22 Identities=27% Similarity=0.471 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++... +++.+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~ 29 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVY 29 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEE
Confidence 46899999999999874 35444
No 90
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=91.99 E-value=0.066 Score=32.09 Aligned_cols=22 Identities=32% Similarity=0.459 Sum_probs=17.7
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||.||++... +|+.+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~ 46 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYY 46 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEE
Confidence 68999999999999884 45443
No 91
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=91.98 E-value=0.17 Score=29.34 Aligned_cols=22 Identities=36% Similarity=0.640 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|... ++..+
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~v 32 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVV 32 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEE
Confidence 68999999999999874 34433
No 92
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=91.96 E-value=0.08 Score=32.38 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=19.2
Q ss_pred hhHh--hhhccCCCceeeeeEeC-CCccc
Q 047075 57 NSFK--YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
++|. +.||+|+||.||++.-. +++.+
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~ 71 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVY 71 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEE
Confidence 3454 68999999999999874 34443
No 93
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=91.87 E-value=0.11 Score=33.53 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
+.||+|++|+||++..++..
T Consensus 339 ~~iG~G~~g~Vy~~~~~~~~ 358 (535)
T PRK09605 339 HLIGKGAEADIKKGEYLGRD 358 (535)
T ss_pred ceeccCCcEEEEEEeecCcc
Confidence 78999999999999886544
No 94
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=91.86 E-value=0.085 Score=32.25 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-. +++.+
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~ 29 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALY 29 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEE
Confidence 46899999999999863 44433
No 95
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=91.85 E-value=0.11 Score=31.72 Aligned_cols=22 Identities=32% Similarity=0.590 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-+ +|+.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~v 28 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRV 28 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEE
Confidence 46899999999999864 45544
No 96
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=91.75 E-value=0.11 Score=30.14 Aligned_cols=22 Identities=41% Similarity=0.746 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|+||++.-. +|+.+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~ 28 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFV 28 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEE
Confidence 36899999999999874 45443
No 97
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=91.73 E-value=0.11 Score=33.68 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=19.5
Q ss_pred hHh--hhhccCCCceeeeeEeC-CCcccC
Q 047075 58 SFK--YKLGQGGYGSVYKGKLL-DGRNVA 83 (83)
Q Consensus 58 ~f~--~~ig~g~~g~vYk~~l~-~g~~vA 83 (83)
.|. ..||+|+||.||.+.=. .|+..|
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyA 170 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYA 170 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEe
Confidence 355 68999999999998763 455543
No 98
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=91.72 E-value=0.11 Score=30.58 Aligned_cols=22 Identities=18% Similarity=0.206 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||.||++.-. +|+.+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~ 29 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYY 29 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEE
Confidence 47899999999999874 45443
No 99
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=91.70 E-value=0.1 Score=30.49 Aligned_cols=22 Identities=45% Similarity=0.800 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||++... +|+.+
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v 29 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLV 29 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEE
Confidence 47899999999999874 45544
No 100
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=91.68 E-value=0.19 Score=29.30 Aligned_cols=22 Identities=27% Similarity=0.451 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++... +|+.+
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~ 32 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIM 32 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEE
Confidence 68999999999998874 34433
No 101
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=91.67 E-value=0.12 Score=29.77 Aligned_cols=22 Identities=32% Similarity=0.537 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+.||.|++|.||+|.- .+|+.+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~ 29 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMM 29 (272)
T ss_pred ceecccCceEEEEEeecCCCcee
Confidence 5789999999999976 355543
No 102
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=91.65 E-value=0.11 Score=34.06 Aligned_cols=23 Identities=35% Similarity=0.586 Sum_probs=19.9
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
+.+|+|+|.++|.++- ..|+.+|
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A 47 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVA 47 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEE
Confidence 7899999999999987 7787665
No 103
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=91.64 E-value=0.12 Score=30.07 Aligned_cols=22 Identities=36% Similarity=0.643 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||.|+||.||+|... ++..+
T Consensus 10 ~~ig~G~~~~vy~~~~~~~~~~~ 32 (277)
T cd06641 10 EKIGKGSFGEVFKGIDNRTQKVV 32 (277)
T ss_pred eeEeecCCeEEEEEEECCCCcEE
Confidence 57899999999999863 44443
No 104
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=91.58 E-value=0.12 Score=29.76 Aligned_cols=17 Identities=35% Similarity=0.798 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.||+|...
T Consensus 11 ~~lg~g~~g~vy~~~~~ 27 (268)
T cd05063 11 KVIGAGEFGEVFRGILK 27 (268)
T ss_pred eEecCCCCccEEEEEEe
Confidence 78999999999999885
No 105
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=91.57 E-value=0.17 Score=29.09 Aligned_cols=21 Identities=38% Similarity=0.773 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEe-CCCcc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~ 81 (83)
+.||+|++|.||++.. .+|..
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~ 29 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVP 29 (267)
T ss_pred hhhcccCCeEEEEEeecCCCce
Confidence 6899999999999986 35543
No 106
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=91.47 E-value=0.13 Score=29.60 Aligned_cols=20 Identities=40% Similarity=0.664 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
..+|+|++|.||+|..++..
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~ 31 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTT 31 (262)
T ss_pred eecCCCCCCcEEEEEecCCc
Confidence 57899999999999875543
No 107
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=91.45 E-value=0.13 Score=29.29 Aligned_cols=20 Identities=35% Similarity=0.730 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
..||+|++|.||++...++.
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~ 29 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKR 29 (256)
T ss_pred eeecCcccceEEEEEEeCCC
Confidence 57899999999999876444
No 108
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=91.38 E-value=0.12 Score=34.54 Aligned_cols=23 Identities=48% Similarity=0.917 Sum_probs=19.0
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
+.+|+|+||.||+|.- ..|..||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vA 42 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVA 42 (732)
T ss_pred hhhcCCccceeeeecccccccchh
Confidence 6899999999999984 5676665
No 109
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=91.26 E-value=0.14 Score=30.66 Aligned_cols=22 Identities=45% Similarity=0.788 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||+|... +|+.+
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~v 29 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIV 29 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEE
Confidence 46899999999999885 35544
No 110
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=91.25 E-value=0.1 Score=30.85 Aligned_cols=22 Identities=36% Similarity=0.764 Sum_probs=17.8
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||++... +|+.+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~v 35 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIV 35 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEE
Confidence 68999999999999874 45544
No 111
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=91.24 E-value=0.12 Score=30.12 Aligned_cols=22 Identities=32% Similarity=0.427 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|+||++... +++.+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~ 29 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIV 29 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEE
Confidence 46899999999999885 34433
No 112
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=91.23 E-value=0.13 Score=31.07 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||+|..
T Consensus 13 ~~lG~G~fg~Vy~a~~ 28 (337)
T cd05054 13 KPLGRGAFGKVIQASA 28 (337)
T ss_pred cccccCcCceEEeccc
Confidence 6899999999999964
No 113
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.22 E-value=0.093 Score=34.92 Aligned_cols=24 Identities=29% Similarity=0.577 Sum_probs=18.7
Q ss_pred hHh--hhhccCCCceeeeeEeC-CCcc
Q 047075 58 SFK--YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 58 ~f~--~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+|. .++|+|+||.|+.+++. +++.
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~ 395 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEY 395 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcE
Confidence 455 68999999999999984 3443
No 114
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=91.20 E-value=0.15 Score=29.35 Aligned_cols=22 Identities=36% Similarity=0.709 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
..||+|++|.||+|.. .+|+.+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~ 37 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELA 37 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEE
Confidence 5789999999999986 455443
No 115
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=91.18 E-value=0.23 Score=28.51 Aligned_cols=21 Identities=38% Similarity=0.816 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||+|++|.||++... +++.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~ 36 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGEL 36 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcE
Confidence 68999999999999863 4443
No 116
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=91.11 E-value=0.12 Score=30.01 Aligned_cols=22 Identities=36% Similarity=0.741 Sum_probs=18.0
Q ss_pred hhHh--hhhccCCCceeeeeEeCC
Q 047075 57 NSFK--YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l~~ 78 (83)
++|. +.||+|++|.||+|...+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~ 29 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRG 29 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEec
Confidence 4455 789999999999998854
No 117
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=91.10 E-value=0.11 Score=31.15 Aligned_cols=22 Identities=23% Similarity=0.450 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|+||++.-. +|+.+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~ 29 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVY 29 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEE
Confidence 46899999999999874 45544
No 118
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=91.09 E-value=0.17 Score=30.41 Aligned_cols=17 Identities=35% Similarity=0.448 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|+||.||++...
T Consensus 11 ~~lg~g~~g~V~~~~~~ 27 (333)
T cd06650 11 SELGAGNGGVVFKVSHK 27 (333)
T ss_pred ccccCCCCEEEEEEEEC
Confidence 68999999999999875
No 119
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=91.02 E-value=0.19 Score=28.77 Aligned_cols=19 Identities=37% Similarity=0.548 Sum_probs=16.3
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
..||+|++|.||++...++
T Consensus 10 ~~lg~G~~~~v~~~~~~~~ 28 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGK 28 (256)
T ss_pred hhhccCCCceEEEeEecCC
Confidence 6889999999999987554
No 120
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=91.01 E-value=0.12 Score=31.55 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||+||++.-. +|+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~ 29 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIY 29 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEE
Confidence 46899999999999763 45443
No 121
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=91.00 E-value=0.12 Score=31.62 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||++..
T Consensus 41 ~~LG~G~fG~V~~~~~ 56 (375)
T cd05104 41 KTLGAGAFGKVVEATA 56 (375)
T ss_pred heecCCccceEEEEEE
Confidence 7899999999999863
No 122
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=90.98 E-value=0.19 Score=29.09 Aligned_cols=18 Identities=33% Similarity=0.809 Sum_probs=15.7
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|++|.||+|...+
T Consensus 11 ~~lg~g~~~~v~~~~~~~ 28 (280)
T cd05049 11 RELGEGAFGKVFLGECYH 28 (280)
T ss_pred hhccccCCceEeeeeecc
Confidence 789999999999998743
No 123
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=90.95 E-value=0.14 Score=31.38 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||++..
T Consensus 44 ~~LG~G~fg~V~~~~~ 59 (374)
T cd05106 44 KTLGAGAFGKVVEATA 59 (374)
T ss_pred heecCCCcccEEEEEE
Confidence 7899999999999873
No 124
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=90.95 E-value=0.13 Score=30.38 Aligned_cols=17 Identities=47% Similarity=0.880 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||+||++...
T Consensus 12 ~~lg~G~~g~Vy~~~~~ 28 (309)
T cd07872 12 EKLGEGTYATVFKGRSK 28 (309)
T ss_pred EEecccCCEEEEEEEec
Confidence 57899999999999864
No 125
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=90.94 E-value=0.17 Score=29.01 Aligned_cols=20 Identities=40% Similarity=0.664 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
..||+|++|.||++..+++.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~ 31 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTT 31 (260)
T ss_pred eeecCcCCCeEEEEEEcCCc
Confidence 57899999999999876543
No 126
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=90.92 E-value=0.12 Score=30.85 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||+||++.-. +|+.+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~ 29 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIY 29 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEE
Confidence 47899999999999864 45443
No 127
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=90.89 E-value=0.11 Score=30.14 Aligned_cols=16 Identities=44% Similarity=0.966 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||+|..
T Consensus 11 ~~lg~g~~g~vy~~~~ 26 (283)
T cd05090 11 EELGECAFGKIYKGHL 26 (283)
T ss_pred eeccccCCcceEEEEE
Confidence 6789999999999975
No 128
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=90.84 E-value=0.14 Score=30.02 Aligned_cols=21 Identities=33% Similarity=0.673 Sum_probs=16.2
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|+||+||++... +++.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~ 27 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKM 27 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCce
Confidence 46899999999998874 3443
No 129
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=90.80 E-value=0.13 Score=30.83 Aligned_cols=21 Identities=33% Similarity=0.308 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.||++... +|..
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~ 32 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLI 32 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcE
Confidence 57899999999999874 3443
No 130
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=90.79 E-value=0.14 Score=30.20 Aligned_cols=17 Identities=29% Similarity=0.706 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||+|...
T Consensus 13 ~~lg~G~~g~V~~a~~~ 29 (303)
T cd05088 13 DVIGEGNFGQVLKARIK 29 (303)
T ss_pred eeecCCCCceEEEEEEc
Confidence 68999999999999873
No 131
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=90.63 E-value=0.12 Score=29.70 Aligned_cols=22 Identities=41% Similarity=0.629 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||++... +|..+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v 30 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGREL 30 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEE
Confidence 68899999999999874 35443
No 132
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=90.48 E-value=0.2 Score=33.71 Aligned_cols=16 Identities=44% Similarity=0.922 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
.+||+|.||.||+|+.
T Consensus 395 r~iG~GqFGdVy~gvY 410 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVY 410 (974)
T ss_pred HhhcCCcccceeeeEe
Confidence 6899999999999987
No 133
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=90.46 E-value=0.21 Score=29.89 Aligned_cols=22 Identities=41% Similarity=0.570 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|+||++.-. +++.+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~v 37 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIV 37 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeE
Confidence 57999999999999864 45443
No 134
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=90.45 E-value=0.14 Score=31.11 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||+||++.-. +|+.+
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~ 29 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVY 29 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEE
Confidence 47899999999999763 45443
No 135
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=90.45 E-value=0.16 Score=29.21 Aligned_cols=17 Identities=41% Similarity=0.599 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.+|+|++|.||++...
T Consensus 8 ~~lg~g~~g~vy~~~~~ 24 (266)
T cd06651 8 KLLGQGAFGRVYLCYDV 24 (266)
T ss_pred ceecCCCCEEEEEEEEc
Confidence 68999999999999864
No 136
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=90.42 E-value=0.18 Score=29.69 Aligned_cols=18 Identities=22% Similarity=0.578 Sum_probs=15.8
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|+||.||+|...+
T Consensus 8 ~~lg~g~~g~v~~~~~~~ 25 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKK 25 (297)
T ss_pred eeecCCCcceEEEEEecC
Confidence 689999999999998843
No 137
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=90.33 E-value=0.13 Score=30.33 Aligned_cols=22 Identities=55% Similarity=0.931 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-. +|+.+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~ 33 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLV 33 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEE
Confidence 57899999999999874 45443
No 138
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=90.29 E-value=0.28 Score=28.66 Aligned_cols=21 Identities=29% Similarity=0.621 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||.|++|.||+|..+ +++.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~ 32 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEI 32 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcE
Confidence 78999999999999885 3443
No 139
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=90.29 E-value=0.33 Score=29.13 Aligned_cols=21 Identities=38% Similarity=0.529 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.+|+|... +|+.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~ 34 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEV 34 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeE
Confidence 78999999999999875 3443
No 140
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=90.28 E-value=0.16 Score=29.18 Aligned_cols=21 Identities=33% Similarity=0.727 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.||+|... +++.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~ 29 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKP 29 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCE
Confidence 67899999999999863 4443
No 141
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=90.14 E-value=0.12 Score=31.06 Aligned_cols=22 Identities=32% Similarity=0.537 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+.+|+|++|.||+|.- .+|+.+
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~v 33 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKV 33 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeE
Confidence 6889999999999976 455544
No 142
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=90.11 E-value=0.16 Score=29.00 Aligned_cols=18 Identities=28% Similarity=0.610 Sum_probs=15.8
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||.|++|.||++...+
T Consensus 12 ~~ig~g~~g~v~~~~~~~ 29 (256)
T cd05039 12 ATIGKGEFGDVMLGDYRG 29 (256)
T ss_pred eeeecCCCceEEEEEecC
Confidence 689999999999998753
No 143
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=90.08 E-value=0.084 Score=33.15 Aligned_cols=17 Identities=41% Similarity=0.812 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+|++||++.+.
T Consensus 42 ~kigeGsFssv~~a~~~ 58 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDI 58 (418)
T ss_pred ccccccchhhhhhhhHh
Confidence 89999999999999874
No 144
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=89.99 E-value=0.39 Score=27.90 Aligned_cols=17 Identities=47% Similarity=0.966 Sum_probs=15.1
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||+|...
T Consensus 11 ~~lg~G~~g~V~~~~~~ 27 (283)
T cd05091 11 EELGEDRFGKVYKGHLF 27 (283)
T ss_pred HHhCCCCCCeEEEEEEe
Confidence 68899999999999864
No 145
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=89.95 E-value=0.17 Score=30.72 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++... +|+.+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~ 29 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIY 29 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEE
Confidence 46899999999999874 34443
No 146
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=89.93 E-value=0.21 Score=29.05 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||+||++..
T Consensus 10 ~~lg~g~~g~v~~~~~ 25 (284)
T cd05081 10 QQLGKGNFGSVELCRY 25 (284)
T ss_pred eeccCCCCceEEEEEe
Confidence 5789999999999975
No 147
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=89.91 E-value=0.1 Score=30.42 Aligned_cols=21 Identities=48% Similarity=0.817 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||+|++|.||+|... +|+.
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~ 32 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQL 32 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcE
Confidence 57899999999999763 3443
No 148
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=89.73 E-value=0.2 Score=29.24 Aligned_cols=16 Identities=38% Similarity=0.684 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||+|..
T Consensus 6 ~~lg~g~~g~vy~~~~ 21 (290)
T cd05045 6 KTLGEGEFGKVVKATA 21 (290)
T ss_pred ccccCcCCcceEEEEE
Confidence 4789999999999975
No 149
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=89.70 E-value=0.27 Score=29.96 Aligned_cols=20 Identities=40% Similarity=0.682 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeCC-Cc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~ 80 (83)
+.||+|+||+||.+...+ |.
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~ 43 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGE 43 (313)
T ss_pred ccccCccceEEEEEEecCCCc
Confidence 789999999999998743 44
No 150
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=89.66 E-value=0.25 Score=29.19 Aligned_cols=22 Identities=27% Similarity=0.617 Sum_probs=17.6
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.+|+|++|+||++... +|+.+
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v 43 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVV 43 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEE
Confidence 68999999999999874 45443
No 151
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=89.66 E-value=0.22 Score=28.85 Aligned_cols=22 Identities=41% Similarity=0.592 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeCC-Cccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~v 82 (83)
+.||+|++|.||++...+ ++.+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~ 29 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIV 29 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEE
Confidence 478999999999999853 4443
No 152
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=89.60 E-value=0.2 Score=30.00 Aligned_cols=23 Identities=39% Similarity=0.787 Sum_probs=19.0
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..||.|+||.+|.|.- .+|+.||
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VA 44 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVA 44 (341)
T ss_pred EeecCCchhheeeeeeccCCceEE
Confidence 5789999999999864 6777665
No 153
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=89.58 E-value=0.21 Score=31.08 Aligned_cols=16 Identities=38% Similarity=0.725 Sum_probs=14.5
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||+|+.
T Consensus 43 ~~LG~G~fG~Vy~~~~ 58 (400)
T cd05105 43 RILGSGAFGKVVEGTA 58 (400)
T ss_pred heecCCCCceEEEEEE
Confidence 6899999999999975
No 154
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=89.49 E-value=0.29 Score=28.47 Aligned_cols=22 Identities=45% Similarity=0.693 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||++... +|..+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~ 29 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTM 29 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEE
Confidence 57899999999999875 44433
No 155
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=89.41 E-value=0.3 Score=28.86 Aligned_cols=16 Identities=50% Similarity=0.947 Sum_probs=14.7
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|++|.||++..
T Consensus 13 ~~lg~G~~g~vy~~~~ 28 (303)
T cd05110 13 KVLGSGAFGTVYKGIW 28 (303)
T ss_pred cccccCCCccEEEEEE
Confidence 5899999999999986
No 156
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=89.37 E-value=0.43 Score=27.65 Aligned_cols=21 Identities=38% Similarity=0.656 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||.|++|.||++... +++.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~ 32 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLF 32 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcE
Confidence 67899999999999884 3443
No 157
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=89.25 E-value=0.37 Score=27.75 Aligned_cols=18 Identities=39% Similarity=0.730 Sum_probs=15.7
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|++|.||++...+
T Consensus 6 ~~ig~G~~~~v~~~~~~~ 23 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKN 23 (269)
T ss_pred hhhcCCCCceEEEEEEcC
Confidence 578999999999999854
No 158
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=89.19 E-value=0.29 Score=28.12 Aligned_cols=20 Identities=35% Similarity=0.491 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
..||+|++|.||++...++.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~ 29 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQY 29 (256)
T ss_pred eEecCcccceEEEEEecCCC
Confidence 57899999999999875543
No 159
>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A ....
Probab=89.18 E-value=0.029 Score=26.98 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=12.8
Q ss_pred ceeeHHHHHHHhhhHhh
Q 047075 45 KRYGYADIKKMTNSFKY 61 (83)
Q Consensus 45 ~~~~~~~l~~~t~~f~~ 61 (83)
.+.||||-..|...|..
T Consensus 55 DP~TYEDP~qAV~eFAk 71 (75)
T PF14575_consen 55 DPHTYEDPNQAVREFAK 71 (75)
T ss_dssp -GGGSSSHHHHHHHCSS
T ss_pred CcccccCHHHHHHHHHh
Confidence 45688999998888873
No 160
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=89.18 E-value=0.25 Score=28.63 Aligned_cols=17 Identities=47% Similarity=0.954 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||+|...
T Consensus 13 ~~ig~g~~g~v~~~~~~ 29 (279)
T cd05057 13 KVLGSGAFGTVYKGVWI 29 (279)
T ss_pred ceecCCCCccEEEEEEe
Confidence 68999999999999874
No 161
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=89.13 E-value=0.11 Score=24.12 Aligned_cols=8 Identities=0% Similarity=0.031 Sum_probs=0.0
Q ss_pred HHHHHHHH
Q 047075 14 FYFRRKFS 21 (83)
Q Consensus 14 ~~~~~~~~ 21 (83)
++++..+|
T Consensus 28 LIlf~iyR 35 (64)
T PF01034_consen 28 LILFLIYR 35 (64)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 33333333
No 162
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=89.06 E-value=0.19 Score=30.37 Aligned_cols=22 Identities=32% Similarity=0.552 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+.||+|++|.||++.. .+|..+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~v 43 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKV 43 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEE
Confidence 6899999999999986 345543
No 163
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=88.94 E-value=0.21 Score=29.84 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=13.7
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||++.-
T Consensus 6 ~~lg~G~~g~Vy~~~~ 21 (332)
T cd05614 6 KVLGTGAYGKVFLVRK 21 (332)
T ss_pred EEEeecCCEEEEEEEE
Confidence 4689999999998875
No 164
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=88.91 E-value=0.29 Score=29.86 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-. .|+.+
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~ 29 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALY 29 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEE
Confidence 46899999999999864 34433
No 165
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=88.91 E-value=0.29 Score=30.31 Aligned_cols=17 Identities=47% Similarity=0.765 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.||||+-.
T Consensus 30 g~Ig~GTYG~VykA~~~ 46 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRK 46 (438)
T ss_pred ceecccccceeeEeeec
Confidence 46899999999999653
No 166
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=88.87 E-value=0.21 Score=29.25 Aligned_cols=22 Identities=36% Similarity=0.702 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|.+|+||+|... +|+.+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~ 30 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETI 30 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEE
Confidence 57899999999999874 45443
No 167
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=88.87 E-value=0.24 Score=29.09 Aligned_cols=22 Identities=32% Similarity=0.594 Sum_probs=18.0
Q ss_pred hhhccCCCceeeeeEeCC-Cccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~v 82 (83)
+.+|+|++|.||++...+ |+.+
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~ 43 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVM 43 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEE
Confidence 689999999999999864 5443
No 168
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=88.86 E-value=0.11 Score=31.21 Aligned_cols=29 Identities=28% Similarity=0.509 Sum_probs=21.1
Q ss_pred HHHhhhHh--hhhccCCCceeeeeEeC-CCcc
Q 047075 53 KKMTNSFK--YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 53 ~~~t~~f~--~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
...+++|. ..||.|++|.||++.-. +|..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~ 37 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQN 37 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCE
Confidence 34556666 78999999999999753 4443
No 169
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=88.81 E-value=0.55 Score=24.82 Aligned_cols=7 Identities=29% Similarity=0.700 Sum_probs=2.8
Q ss_pred HHHHHHH
Q 047075 12 IAFYFRR 18 (83)
Q Consensus 12 ~~~~~~~ 18 (83)
++.++..
T Consensus 17 ~~~~~~~ 23 (130)
T PF12273_consen 17 FLFYCHN 23 (130)
T ss_pred HHHHHHH
Confidence 3344443
No 170
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=88.76 E-value=0.26 Score=30.52 Aligned_cols=19 Identities=26% Similarity=0.690 Sum_probs=15.9
Q ss_pred Hh--hhhccCCCceeeeeEeC
Q 047075 59 FK--YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 59 f~--~~ig~g~~g~vYk~~l~ 77 (83)
|. .+||+|+||.||...-.
T Consensus 27 F~~lkviGkG~fGkV~~Vrk~ 47 (357)
T KOG0598|consen 27 FEILKVIGKGSFGKVFQVRKK 47 (357)
T ss_pred eeeeeeeeccCCceEEEEEEc
Confidence 55 79999999999988653
No 171
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=88.72 E-value=0.39 Score=28.56 Aligned_cols=21 Identities=24% Similarity=0.593 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.+|+|++|.+|++... +|..
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~ 52 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEV 52 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcE
Confidence 68999999999999874 4443
No 172
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=88.65 E-value=0.19 Score=29.28 Aligned_cols=21 Identities=48% Similarity=0.858 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||+|++|.||++... +++.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~ 32 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQL 32 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcE
Confidence 57899999999999875 4443
No 173
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=88.63 E-value=0.38 Score=30.10 Aligned_cols=23 Identities=39% Similarity=0.713 Sum_probs=18.6
Q ss_pred hhhccCCCceeeeeEeCC-CcccC
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~vA 83 (83)
..+|+|.||.||+++-+. |+.+|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A 64 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVA 64 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeE
Confidence 689999999999998865 65543
No 174
>PHA03210 serine/threonine kinase US3; Provisional
Probab=88.62 E-value=0.23 Score=31.83 Aligned_cols=20 Identities=25% Similarity=0.595 Sum_probs=16.1
Q ss_pred hhHh--hhhccCCCceeeeeEe
Q 047075 57 NSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l 76 (83)
+.|. ..||+|+||+||++..
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~ 169 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICAL 169 (501)
T ss_pred hccEEEeEecCCCCcceEEEEE
Confidence 3444 6899999999998865
No 175
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=88.56 E-value=0.25 Score=28.60 Aligned_cols=20 Identities=40% Similarity=0.797 Sum_probs=16.2
Q ss_pred hhHh--hhhccCCCceeeeeEe
Q 047075 57 NSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l 76 (83)
++|. +.||+|++|.||+|..
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~ 27 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIA 27 (277)
T ss_pred HHceeeeeeccccCCeEEEEEe
Confidence 3444 7899999999999875
No 176
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=88.54 E-value=1.1 Score=22.23 Aligned_cols=6 Identities=0% Similarity=0.240 Sum_probs=2.2
Q ss_pred HHHHHH
Q 047075 12 IAFYFR 17 (83)
Q Consensus 12 ~~~~~~ 17 (83)
++++++
T Consensus 47 ~Vilwf 52 (94)
T PF05393_consen 47 LVILWF 52 (94)
T ss_pred HHHHHH
Confidence 333333
No 177
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=88.52 E-value=0.38 Score=30.02 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=15.1
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|+||.||++...
T Consensus 43 ~~lG~G~fG~Vy~~~~~ 59 (401)
T cd05107 43 RTLGSGAFGRVVEATAH 59 (401)
T ss_pred hhccCCCceeEEEEEEc
Confidence 68999999999999863
No 178
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=88.47 E-value=0.3 Score=28.40 Aligned_cols=22 Identities=41% Similarity=0.542 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++... +++.+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~ 29 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRIL 29 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEE
Confidence 47899999999999863 44433
No 179
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=88.46 E-value=0.39 Score=28.31 Aligned_cols=22 Identities=32% Similarity=0.528 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++... +|+.+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v 48 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLV 48 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEE
Confidence 47899999999999873 55543
No 180
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=88.45 E-value=0.23 Score=32.25 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=21.9
Q ss_pred hHh-hhhccCCCceeeeeEeCCCcccC
Q 047075 58 SFK-YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 58 ~f~-~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
.|+ +-|+.++-|.||+|++.+|+.||
T Consensus 127 eF~~~PiAsASIaQVH~A~L~sG~~VA 153 (517)
T COG0661 127 EFEPEPIASASIAQVHRAVLKSGEEVA 153 (517)
T ss_pred HcCCCchhhhhHhhheeEEecCCCEEE
Confidence 344 67889999999999999998775
No 181
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=88.39 E-value=0.46 Score=34.06 Aligned_cols=16 Identities=50% Similarity=0.756 Sum_probs=14.1
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
.++|+|+||.|||+.=
T Consensus 485 ~lLGkGGFG~VvkVRN 500 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRN 500 (1351)
T ss_pred HHhcCCCCceEEEEee
Confidence 5899999999999863
No 182
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=88.32 E-value=0.31 Score=28.07 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||.|++|.||++... +|+.+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~ 29 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEY 29 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEE
Confidence 46899999999999884 45543
No 183
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=88.26 E-value=0.26 Score=34.56 Aligned_cols=17 Identities=41% Similarity=0.874 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|.||.||+|.+.
T Consensus 698 ~~lG~G~FG~VY~g~~~ 714 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYS 714 (1025)
T ss_pred eeeccccccceEEEEEe
Confidence 68999999999999984
No 184
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=88.25 E-value=0.26 Score=29.41 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++.-. +|..+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~v 28 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKV 28 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEE
Confidence 46899999999999863 45444
No 185
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=88.21 E-value=0.28 Score=28.32 Aligned_cols=17 Identities=47% Similarity=0.855 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.||++...
T Consensus 12 ~~lg~g~~g~v~~~~~~ 28 (277)
T cd05032 12 RELGQGSFGMVYEGLAK 28 (277)
T ss_pred eEecCCCCceEEEEEEe
Confidence 68999999999999874
No 186
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=88.17 E-value=0.31 Score=28.47 Aligned_cols=16 Identities=50% Similarity=1.012 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|++|.||+|..
T Consensus 12 ~~lg~G~~g~Vy~~~~ 27 (288)
T cd05061 12 RELGQGSFGMVYEGNA 27 (288)
T ss_pred eeecCCCCcEEEEEEE
Confidence 6899999999999864
No 187
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=88.14 E-value=0.31 Score=27.89 Aligned_cols=22 Identities=41% Similarity=0.675 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||++... +++.+
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~ 30 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGREL 30 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEE
Confidence 68999999999999864 34433
No 188
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=88.04 E-value=0.41 Score=28.02 Aligned_cols=21 Identities=43% Similarity=0.735 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeCC-Ccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~ 81 (83)
..||.|++|.||++...+ +..
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~ 39 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGAL 39 (292)
T ss_pred heecCCCCeEEEEEEECCCCce
Confidence 578999999999998743 443
No 189
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=87.96 E-value=0.73 Score=26.74 Aligned_cols=15 Identities=33% Similarity=0.275 Sum_probs=13.2
Q ss_pred hccCCCceeeeeEeC
Q 047075 63 LGQGGYGSVYKGKLL 77 (83)
Q Consensus 63 ig~g~~g~vYk~~l~ 77 (83)
+|+|+||.||++.-.
T Consensus 24 lg~g~~g~v~~~~~~ 38 (267)
T PHA03390 24 LIDGKFGKVSVLKHK 38 (267)
T ss_pred ecCCCceEEEEEEEc
Confidence 499999999999863
No 190
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=87.84 E-value=0.47 Score=27.40 Aligned_cols=22 Identities=32% Similarity=0.517 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..+|.|++|.||++... +++.+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~ 29 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVV 29 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEE
Confidence 57899999999999874 44433
No 191
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=87.78 E-value=0.33 Score=28.13 Aligned_cols=22 Identities=50% Similarity=0.875 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|... +|+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~ 28 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIV 28 (285)
T ss_pred eEecccCceEEEEEEECCCCcEE
Confidence 36899999999999874 45443
No 192
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=87.78 E-value=0.53 Score=27.32 Aligned_cols=22 Identities=32% Similarity=0.617 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||.|++|.||+|... +++.+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~v 32 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVV 32 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEE
Confidence 67999999999999874 34443
No 193
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=87.77 E-value=0.33 Score=27.61 Aligned_cols=18 Identities=33% Similarity=0.754 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.+|+|++|.||++...+
T Consensus 6 ~~l~~g~~~~v~~~~~~~ 23 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKS 23 (257)
T ss_pred EEecCCCcceEEEEEEcC
Confidence 468999999999998853
No 194
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=87.75 E-value=0.32 Score=28.60 Aligned_cols=17 Identities=53% Similarity=0.931 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.||++...
T Consensus 12 ~~lg~g~~g~vy~~~~~ 28 (301)
T cd07873 12 DKLGEGTYATVYKGRSK 28 (301)
T ss_pred eEeccCcCEEEEEEEEc
Confidence 57899999999999864
No 195
>PHA03209 serine/threonine kinase US3; Provisional
Probab=87.71 E-value=0.43 Score=29.05 Aligned_cols=21 Identities=19% Similarity=0.321 Sum_probs=17.4
Q ss_pred hHh--hhhccCCCceeeeeEeCC
Q 047075 58 SFK--YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 58 ~f~--~~ig~g~~g~vYk~~l~~ 78 (83)
+|. ..||+|+||.||+|...+
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~ 89 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPG 89 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECC
Confidence 455 789999999999998753
No 196
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=87.70 E-value=0.43 Score=28.96 Aligned_cols=22 Identities=32% Similarity=0.288 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-. .|..+
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~v 49 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINV 49 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCcee
Confidence 68999999999999763 35444
No 197
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=87.65 E-value=0.44 Score=27.55 Aligned_cols=21 Identities=48% Similarity=0.909 Sum_probs=16.6
Q ss_pred hhhccCCCceeeeeEe-CCCcc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~ 81 (83)
+.||+|++|.+|+|.. .+|..
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~ 28 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRV 28 (277)
T ss_pred hheeccCCceEEEEEEcCCCcE
Confidence 4789999999999987 34443
No 198
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=87.63 E-value=0.44 Score=27.62 Aligned_cols=17 Identities=53% Similarity=1.070 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.||+|...
T Consensus 11 ~~lg~G~~g~Vy~~~~~ 27 (283)
T cd05048 11 EELGEGAFGKVYKGELT 27 (283)
T ss_pred hcccCccCCcEEEEEEe
Confidence 68999999999999864
No 199
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=87.61 E-value=0.29 Score=28.14 Aligned_cols=21 Identities=38% Similarity=0.618 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.+|++... +|..
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~ 29 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRE 29 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCE
Confidence 68999999999999864 3443
No 200
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=87.51 E-value=0.25 Score=29.00 Aligned_cols=20 Identities=50% Similarity=0.983 Sum_probs=16.3
Q ss_pred hhhccCCCceeeeeEeC-CCc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~ 80 (83)
..||+|++|.||++... +++
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~ 34 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGR 34 (311)
T ss_pred EEeccCCCEEEEEEEECCCCc
Confidence 57899999999999864 344
No 201
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=87.46 E-value=0.39 Score=27.69 Aligned_cols=17 Identities=35% Similarity=0.771 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.||+|...
T Consensus 10 ~~lg~g~~g~vy~~~~~ 26 (269)
T cd05065 10 EVIGAGEFGEVCRGRLK 26 (269)
T ss_pred eEecCCCCCeEEEEEEe
Confidence 68899999999999874
No 202
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=87.44 E-value=0.37 Score=27.54 Aligned_cols=17 Identities=29% Similarity=0.391 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||.|++|+||++...
T Consensus 7 ~~lg~g~~~~v~~~~~~ 23 (267)
T cd06610 7 EVIGVGATAVVYAAICL 23 (267)
T ss_pred eeecCCCCeEEEEEEEc
Confidence 46899999999999864
No 203
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=87.22 E-value=0.3 Score=29.62 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|+||.||+|...
T Consensus 36 ~~ig~G~~g~Vy~a~~~ 52 (340)
T PTZ00426 36 RTLGTGSFGRVILATYK 52 (340)
T ss_pred EEEeecCCeEEEEEEEE
Confidence 68999999999999864
No 204
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=87.17 E-value=0.29 Score=28.67 Aligned_cols=22 Identities=36% Similarity=0.643 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++... +|+.+
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~ 40 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIV 40 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEE
Confidence 67899999999999874 45443
No 205
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=87.16 E-value=0.39 Score=27.83 Aligned_cols=22 Identities=41% Similarity=0.738 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..+|+|++|.||++... +|+.+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~ 29 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIV 29 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEE
Confidence 46899999999999885 45543
No 206
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=87.08 E-value=0.41 Score=27.53 Aligned_cols=17 Identities=53% Similarity=0.888 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.||++...
T Consensus 12 ~~ig~g~~~~v~~~~~~ 28 (263)
T cd05052 12 HKLGGGQYGEVYEGVWK 28 (263)
T ss_pred eecCCcccceEEEEEEe
Confidence 68999999999999874
No 207
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=87.02 E-value=0.55 Score=26.68 Aligned_cols=18 Identities=56% Similarity=0.887 Sum_probs=16.0
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||.|.+|.+|++...+
T Consensus 9 ~~i~~g~~~~v~~~~~~~ 26 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKE 26 (256)
T ss_pred hhhcCCCCeEEEEEEEcC
Confidence 688999999999999854
No 208
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=86.71 E-value=0.39 Score=27.10 Aligned_cols=21 Identities=38% Similarity=0.534 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.+|+|... ++..
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~ 27 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGEL 27 (260)
T ss_pred eEeeecCceEEEEEEECCCCcE
Confidence 46899999999999886 4443
No 209
>PHA02988 hypothetical protein; Provisional
Probab=86.70 E-value=0.44 Score=27.97 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=22.8
Q ss_pred CceeeHHHHHHHhhhHhhhhccCCCceeeeeEeCCCccc
Q 047075 44 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 44 ~~~~~~~~l~~~t~~f~~~ig~g~~g~vYk~~l~~g~~v 82 (83)
.+.++.+|+...+. ..|++|+++.||+|.. +|+.+
T Consensus 12 ~~~i~~~~i~~~~~---~~i~~g~~~~v~~~~~-~~~~v 46 (283)
T PHA02988 12 IKCIESDDIDKYTS---VLIKENDQNSIYKGIF-NNKEV 46 (283)
T ss_pred ceecCHHHcCCCCC---eEEeeCCceEEEEEEE-CCEEE
Confidence 34455556532211 5789999999999998 44443
No 210
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=86.69 E-value=0.45 Score=27.55 Aligned_cols=22 Identities=36% Similarity=0.601 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|... +|..+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~ 28 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETV 28 (286)
T ss_pred eecccCCCcEEEEEEECCCCceE
Confidence 46899999999999874 45433
No 211
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=86.65 E-value=0.58 Score=27.19 Aligned_cols=18 Identities=39% Similarity=0.770 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|++|.||++....
T Consensus 11 ~~lg~g~~g~v~~~~~~~ 28 (282)
T cd06643 11 GELGDGAFGKVYKAQNKE 28 (282)
T ss_pred hhcccCCCeEEEEEEECC
Confidence 578999999999998753
No 212
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=86.57 E-value=0.42 Score=27.96 Aligned_cols=22 Identities=50% Similarity=0.752 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||+|... +|+.+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v 28 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIV 28 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEE
Confidence 46899999999999874 45443
No 213
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=86.57 E-value=0.45 Score=27.05 Aligned_cols=21 Identities=38% Similarity=0.618 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.+|++... +|+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~ 27 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRV 27 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcE
Confidence 46899999999999874 4443
No 214
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=86.40 E-value=0.21 Score=30.09 Aligned_cols=9 Identities=0% Similarity=-0.171 Sum_probs=0.0
Q ss_pred HHHHHHHHh
Q 047075 14 FYFRRKFSS 22 (83)
Q Consensus 14 ~~~~~~~~~ 22 (83)
++.++++|+
T Consensus 164 iIa~icyrr 172 (290)
T PF05454_consen 164 IIACICYRR 172 (290)
T ss_dssp ---------
T ss_pred HHHHHhhhh
Confidence 333333333
No 215
>PTZ00046 rifin; Provisional
Probab=86.26 E-value=0.84 Score=28.43 Aligned_cols=7 Identities=0% Similarity=0.188 Sum_probs=2.9
Q ss_pred HHHHhhc
Q 047075 18 RKFSSYN 24 (83)
Q Consensus 18 ~~~~~~~ 24 (83)
.++||++
T Consensus 338 LRYRRKK 344 (358)
T PTZ00046 338 LRYRRKK 344 (358)
T ss_pred HHhhhcc
Confidence 3444443
No 216
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=86.26 E-value=0.53 Score=27.47 Aligned_cols=18 Identities=33% Similarity=0.436 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|+||.||++..++
T Consensus 11 ~~lg~G~~g~v~~~~~~~ 28 (296)
T cd05051 11 EKLGEGQFGEVHLCEADG 28 (296)
T ss_pred ccccCCCCccEEEEEecc
Confidence 688999999999988753
No 217
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=86.25 E-value=0.41 Score=28.98 Aligned_cols=20 Identities=20% Similarity=0.355 Sum_probs=16.2
Q ss_pred hhHh--hhhccCCCceeeeeEe
Q 047075 57 NSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l 76 (83)
+.|. ..||+|+||.||++.-
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~ 38 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYD 38 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEe
Confidence 3454 6899999999999875
No 218
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=86.21 E-value=0.49 Score=28.15 Aligned_cols=17 Identities=29% Similarity=0.643 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.+|+|++|+||+|...
T Consensus 27 ~~lg~g~~g~v~~~~~~ 43 (313)
T cd06633 27 HEIGHGSFGAVYFATNS 43 (313)
T ss_pred eeeccCCCeEEEEEEEC
Confidence 57899999999999874
No 219
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=86.19 E-value=0.7 Score=26.45 Aligned_cols=21 Identities=33% Similarity=0.319 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.||++... +++.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~ 28 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKI 28 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcE
Confidence 57899999999999885 3443
No 220
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=86.15 E-value=0.47 Score=27.48 Aligned_cols=22 Identities=50% Similarity=0.821 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||.|++|.+|+|... +|+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~ 28 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIV 28 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEE
Confidence 46899999999999974 45443
No 221
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=86.09 E-value=0.48 Score=27.91 Aligned_cols=22 Identities=41% Similarity=0.649 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
..||.|++|.||++.- ++++.+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v 47 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEV 47 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEE
Confidence 5799999999999986 455544
No 222
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=86.06 E-value=0.78 Score=29.60 Aligned_cols=22 Identities=36% Similarity=0.662 Sum_probs=18.0
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||+|.||.|+.|.+.+...+
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~v 233 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKV 233 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcc
Confidence 7899999999999999554333
No 223
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=85.96 E-value=0.44 Score=27.79 Aligned_cols=17 Identities=29% Similarity=0.767 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|+||.||++..+
T Consensus 11 ~~lg~g~~g~v~~~~~~ 27 (288)
T cd05050 11 RDIGQGAFGRVFQARAP 27 (288)
T ss_pred ccccccccccEEEEEEc
Confidence 68899999999998753
No 224
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=85.81 E-value=0.52 Score=27.93 Aligned_cols=20 Identities=35% Similarity=0.273 Sum_probs=15.8
Q ss_pred hhhccCCCceeeeeEeC-CCc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~ 80 (83)
+.||+|+||.||++... +|.
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~ 27 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGL 27 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCe
Confidence 46899999999999763 343
No 225
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=85.70 E-value=0.54 Score=27.17 Aligned_cols=17 Identities=29% Similarity=0.472 Sum_probs=15.1
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.||++..+
T Consensus 10 ~~ig~g~~~~v~~~~~~ 26 (284)
T cd05038 10 KQLGEGHFGKVELCRYD 26 (284)
T ss_pred eeeccCCCeeEEEeeec
Confidence 57899999999999874
No 226
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=85.70 E-value=0.68 Score=27.32 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++... +++.+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v 49 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQV 49 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEE
Confidence 47899999999999863 45443
No 227
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=85.68 E-value=0.52 Score=27.51 Aligned_cols=16 Identities=38% Similarity=0.669 Sum_probs=13.8
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||.|++|.||++..
T Consensus 6 ~~lg~G~~g~v~~~~~ 21 (290)
T cd05613 6 KVLGTGAYGKVFLVRK 21 (290)
T ss_pred eeeccCCcceEEEEEe
Confidence 4689999999999875
No 228
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=85.64 E-value=0.5 Score=27.41 Aligned_cols=21 Identities=38% Similarity=0.626 Sum_probs=16.4
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||+|++|.||++... +|+.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~ 27 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEI 27 (284)
T ss_pred EEecccCCeEEEEEEECCCCcE
Confidence 36799999999999874 4543
No 229
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=85.48 E-value=5.1 Score=25.95 Aligned_cols=18 Identities=28% Similarity=0.685 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
.++-+|.||.+|+|.+.+
T Consensus 290 ~llqEGtFGri~~gI~~e 307 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWRE 307 (563)
T ss_pred hhhhcCchhheeeeeecc
Confidence 677899999999998854
No 230
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=85.48 E-value=0.35 Score=32.21 Aligned_cols=22 Identities=23% Similarity=0.551 Sum_probs=17.6
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||.|+||+||+|... ++..+
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~v 32 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLY 32 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEE
Confidence 57899999999999875 45444
No 231
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=85.46 E-value=1.2 Score=27.74 Aligned_cols=7 Identities=0% Similarity=0.188 Sum_probs=2.9
Q ss_pred HHHHhhc
Q 047075 18 RKFSSYN 24 (83)
Q Consensus 18 ~~~~~~~ 24 (83)
.++||++
T Consensus 333 LRYRRKK 339 (353)
T TIGR01477 333 LRYRRKK 339 (353)
T ss_pred HHhhhcc
Confidence 3444443
No 232
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=85.43 E-value=0.53 Score=28.40 Aligned_cols=17 Identities=41% Similarity=0.745 Sum_probs=14.9
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|+||.||.+.-.
T Consensus 24 ~~iG~G~fG~V~~v~~~ 40 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDK 40 (322)
T ss_pred eeccccCCceEEEEEec
Confidence 68999999999999853
No 233
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=85.41 E-value=0.53 Score=27.16 Aligned_cols=17 Identities=35% Similarity=0.683 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..+|+|+||.||++...
T Consensus 11 ~~lg~g~~g~v~~~~~~ 27 (275)
T cd05046 11 TTLGRGEFGEVFLAKAK 27 (275)
T ss_pred eeecccceeEEEEEEec
Confidence 57899999999999863
No 234
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=85.39 E-value=0.61 Score=26.67 Aligned_cols=18 Identities=28% Similarity=0.619 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|++|.||++..++
T Consensus 12 ~~lg~g~~~~v~~~~~~~ 29 (256)
T cd05082 12 QTIGKGEFGDVMLGDYRG 29 (256)
T ss_pred eeecccCCCeEEEEEEcC
Confidence 688999999999998754
No 235
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=85.35 E-value=0.44 Score=28.58 Aligned_cols=22 Identities=32% Similarity=0.581 Sum_probs=17.2
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|++|.||++.-. +|..+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~v 33 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKV 33 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEE
Confidence 67899999999999864 45443
No 236
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=85.31 E-value=0.53 Score=27.29 Aligned_cols=21 Identities=33% Similarity=0.493 Sum_probs=16.6
Q ss_pred hhhccCCCceeeeeEeCC-Ccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~ 81 (83)
+.||+|++|.+|++..++ ++.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~ 28 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEI 28 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcE
Confidence 468999999999998853 443
No 237
>PHA03212 serine/threonine kinase US3; Provisional
Probab=85.29 E-value=0.67 Score=28.79 Aligned_cols=22 Identities=14% Similarity=0.048 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|+||.||++.-. .++.+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~v 120 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHV 120 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEE
Confidence 67899999999999763 34433
No 238
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=85.29 E-value=0.55 Score=26.82 Aligned_cols=21 Identities=38% Similarity=0.676 Sum_probs=16.4
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.+|++... ++..
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~ 27 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGEL 27 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcE
Confidence 36899999999999874 4443
No 239
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=85.22 E-value=0.57 Score=27.17 Aligned_cols=22 Identities=45% Similarity=0.776 Sum_probs=16.6
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||.|++|.||++... +|+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~ 28 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVV 28 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEE
Confidence 36799999999999874 45433
No 240
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=85.06 E-value=0.88 Score=26.98 Aligned_cols=17 Identities=29% Similarity=0.759 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.+|.|++|.||+|...
T Consensus 21 ~~lg~g~~g~v~~~~~~ 37 (308)
T cd06634 21 REIGHGSFGAVYFARDV 37 (308)
T ss_pred HheeeCCCEEEEEEEEc
Confidence 68999999999999874
No 241
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=84.93 E-value=0.72 Score=27.83 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||.|++|.||+|.-. +|+.+
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v 33 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRV 33 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEE
Confidence 57899999999999863 45443
No 242
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=84.83 E-value=0.57 Score=27.27 Aligned_cols=17 Identities=41% Similarity=0.636 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.++.|++|.+|++..+
T Consensus 25 ~~l~~g~~~~v~~~~~~ 41 (286)
T cd06614 25 EKIGEGASGEVYKATDR 41 (286)
T ss_pred HhccCCCCeEEEEEEEc
Confidence 68999999999999885
No 243
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=84.52 E-value=0.64 Score=26.42 Aligned_cols=17 Identities=29% Similarity=0.558 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.+|.|++|.||++.-.
T Consensus 6 ~~lg~g~~~~v~~~~~~ 22 (265)
T cd08217 6 ETIGKGSFGTVRKVRRK 22 (265)
T ss_pred eeeccCCCeEEEEeeec
Confidence 46799999999999763
No 244
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=84.44 E-value=0.69 Score=26.91 Aligned_cols=16 Identities=31% Similarity=0.897 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..+|+|+||.||++..
T Consensus 11 ~~lg~g~~g~v~~~~~ 26 (280)
T cd05092 11 WELGEGAFGKVFLAEC 26 (280)
T ss_pred cccCCccCCeEEEeEE
Confidence 6889999999999864
No 245
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=84.37 E-value=0.63 Score=26.81 Aligned_cols=18 Identities=33% Similarity=0.837 Sum_probs=15.5
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|++|.||+|...+
T Consensus 12 ~~lg~g~~g~v~~~~~~~ 29 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMS 29 (270)
T ss_pred eeeCCccceeEEEEEEec
Confidence 688999999999998643
No 246
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=84.25 E-value=0.76 Score=27.07 Aligned_cols=18 Identities=44% Similarity=0.737 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|++|.||+|...+
T Consensus 6 ~~ig~g~~g~v~~~~~~~ 23 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKN 23 (316)
T ss_pred EEeccCCcEEEEEEEecC
Confidence 468999999999999743
No 247
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=84.20 E-value=0.61 Score=28.35 Aligned_cols=20 Identities=20% Similarity=0.355 Sum_probs=16.3
Q ss_pred hhHh--hhhccCCCceeeeeEe
Q 047075 57 NSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l 76 (83)
+.|. ..||+|+||.||++.-
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~ 45 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYD 45 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEE
Confidence 3444 6899999999999975
No 248
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=84.14 E-value=0.57 Score=32.69 Aligned_cols=22 Identities=36% Similarity=0.510 Sum_probs=17.3
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.||+|+||.||+|.-. .|+.+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~V 30 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRV 30 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEE
Confidence 57899999999999864 35444
No 249
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=83.99 E-value=0.65 Score=27.50 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeCC-Ccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~ 81 (83)
..||+|++|+||++...+ ++.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~ 28 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKL 28 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcE
Confidence 468999999999998754 443
No 250
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=83.89 E-value=0.79 Score=26.70 Aligned_cols=16 Identities=31% Similarity=0.569 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||.+..
T Consensus 10 ~~lg~g~~g~v~~~~~ 25 (284)
T cd05079 10 RDLGEGHFGKVELCRY 25 (284)
T ss_pred eecCCCCceeEEEEEE
Confidence 5789999999999875
No 251
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=83.58 E-value=0.53 Score=27.48 Aligned_cols=17 Identities=35% Similarity=0.714 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.||++...
T Consensus 18 ~~ig~g~~g~v~~~~~~ 34 (293)
T cd05053 18 KPLGEGAFGQVVKAEAV 34 (293)
T ss_pred eEecccccccEEEEEEe
Confidence 68899999999999863
No 252
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=83.26 E-value=0.69 Score=27.07 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++... +++.+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~ 29 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYY 29 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEE
Confidence 46899999999999874 34443
No 253
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=83.25 E-value=0.87 Score=27.17 Aligned_cols=19 Identities=32% Similarity=0.634 Sum_probs=15.9
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
..+|+|.||.||.|.-...
T Consensus 28 r~LgkgkFG~vYlarekks 46 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKS 46 (281)
T ss_pred ccccCCccccEeEeeeccC
Confidence 6889999999999987543
No 254
>PHA03211 serine/threonine kinase US3; Provisional
Probab=83.22 E-value=0.9 Score=29.06 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=15.7
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..||+|++|.||++..++
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~ 192 (461)
T PHA03211 175 RALTPGSEGCVFESSHPD 192 (461)
T ss_pred EEEccCCCeEEEEEEECC
Confidence 578999999999998864
No 255
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=83.22 E-value=0.4 Score=27.50 Aligned_cols=22 Identities=41% Similarity=0.752 Sum_probs=17.5
Q ss_pred hhhHh--hhhccCCCceeeeeEeC
Q 047075 56 TNSFK--YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 56 t~~f~--~~ig~g~~g~vYk~~l~ 77 (83)
+++|. ..+|.|++|.+|++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~ 28 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK 28 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC
Confidence 34444 68899999999999874
No 256
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=83.15 E-value=0.73 Score=27.04 Aligned_cols=17 Identities=35% Similarity=0.483 Sum_probs=14.6
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|+||.||++...
T Consensus 11 ~~lg~G~~g~v~~~~~~ 27 (295)
T cd05097 11 EKLGEGQFGEVHLCEAE 27 (295)
T ss_pred hccCCCCCceEEecccc
Confidence 68999999999987653
No 257
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=83.13 E-value=0.74 Score=26.23 Aligned_cols=20 Identities=35% Similarity=0.634 Sum_probs=15.8
Q ss_pred hhhccCCCceeeeeEeC-CCc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~ 80 (83)
+.+|+|++|.+|++.-. +|+
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~ 26 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGK 26 (256)
T ss_pred EEeccCCceEEEEEEEcCCCC
Confidence 46899999999998874 444
No 258
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=83.12 E-value=0.79 Score=31.50 Aligned_cols=21 Identities=33% Similarity=0.697 Sum_probs=17.8
Q ss_pred hhhccCCCceeeeeEe--CCCcc
Q 047075 61 YKLGQGGYGSVYKGKL--LDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l--~~g~~ 81 (83)
++||+|.||.|.+|.+ ++|..
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~ 138 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKH 138 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcE
Confidence 7899999999999988 46654
No 259
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=83.05 E-value=0.62 Score=26.59 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.+|+|++|.||++...+
T Consensus 12 ~~lg~g~~g~v~~~~~~~ 29 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTG 29 (254)
T ss_pred eeeccCCCCceEecccCC
Confidence 689999999999987643
No 260
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=82.95 E-value=0.97 Score=27.20 Aligned_cols=21 Identities=29% Similarity=0.495 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..+|+|++|+||++.-. +|..
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~ 32 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEK 32 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCe
Confidence 57899999999999863 4443
No 261
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=82.81 E-value=0.71 Score=26.60 Aligned_cols=16 Identities=38% Similarity=0.821 Sum_probs=14.6
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||+|..
T Consensus 10 ~~lg~g~~g~v~~~~~ 25 (267)
T cd05066 10 KVIGAGEFGEVCSGRL 25 (267)
T ss_pred eeecccCCCceEEEEE
Confidence 6889999999999976
No 262
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=82.66 E-value=0.57 Score=27.49 Aligned_cols=15 Identities=40% Similarity=0.636 Sum_probs=13.4
Q ss_pred hhhccCCCceeeeeE
Q 047075 61 YKLGQGGYGSVYKGK 75 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~ 75 (83)
+.||+|+||.||++.
T Consensus 11 ~~lg~G~~g~v~~~~ 25 (296)
T cd05095 11 EKLGEGQFGEVHLCE 25 (296)
T ss_pred eeccCCCCCeEEecc
Confidence 679999999999874
No 263
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=82.57 E-value=0.79 Score=26.20 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=16.4
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||.|++|.||++... +++.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~ 27 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKM 27 (258)
T ss_pred EEeccCCCceEEEEEEccCCcE
Confidence 46899999999999875 3443
No 264
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=82.57 E-value=0.81 Score=26.08 Aligned_cols=21 Identities=43% Similarity=0.569 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeCC-Ccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~ 81 (83)
+.||+|++|.+|++...+ |+.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~ 28 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKI 28 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcE
Confidence 578999999999998854 543
No 265
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=82.44 E-value=0.33 Score=32.97 Aligned_cols=17 Identities=41% Similarity=0.831 Sum_probs=14.0
Q ss_pred hhccCCCceeeeeEeCC
Q 047075 62 KLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 62 ~ig~g~~g~vYk~~l~~ 78 (83)
.+|.|.||.|||++-.+
T Consensus 39 ELGDGAFGKVyKA~nke 55 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKE 55 (1187)
T ss_pred hhcCccchhhhhhhccc
Confidence 56889999999998643
No 266
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=82.08 E-value=0.91 Score=26.71 Aligned_cols=20 Identities=40% Similarity=0.692 Sum_probs=16.0
Q ss_pred hhhccCCCceeeeeEeC-CCc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~ 80 (83)
..+|+|++|.||++.-. +++
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~ 45 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQ 45 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCC
Confidence 57899999999999753 444
No 267
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=82.03 E-value=0.75 Score=27.18 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||++..
T Consensus 24 ~~lg~G~~g~V~~~~~ 39 (307)
T cd05098 24 KPLGEGCFGQVVMAEA 39 (307)
T ss_pred eeeccCCCeeEEEeEE
Confidence 6889999999999864
No 268
>PF09919 DUF2149: Uncharacterized conserved protein (DUF2149); InterPro: IPR018676 This family of conserved hypothetical proteins has no known function.
Probab=81.90 E-value=0.92 Score=22.73 Aligned_cols=17 Identities=41% Similarity=0.923 Sum_probs=13.0
Q ss_pred ccC-CCceeeeeEeCCCccc
Q 047075 64 GQG-GYGSVYKGKLLDGRNV 82 (83)
Q Consensus 64 g~g-~~g~vYk~~l~~g~~v 82 (83)
|+| .-|++|+ +++|+.+
T Consensus 71 G~G~~~G~aYr--l~~Gk~I 88 (92)
T PF09919_consen 71 GSGERLGTAYR--LKDGKLI 88 (92)
T ss_pred CCCeECeEEEE--cCCceEE
Confidence 455 6799999 8888854
No 269
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=81.83 E-value=1.1 Score=25.75 Aligned_cols=21 Identities=29% Similarity=0.556 Sum_probs=16.0
Q ss_pred hhhccCCCceeeeeEe-CCCcc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~ 81 (83)
..||+|++|.+|++.- .+++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~ 27 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTL 27 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcE
Confidence 4689999999999875 34443
No 270
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.80 E-value=1.3 Score=29.98 Aligned_cols=23 Identities=30% Similarity=0.599 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..||.|+||.||-+.- .+.++||
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVA 55 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVA 55 (948)
T ss_pred HHhcCCccceeEEeeccCccceee
Confidence 5899999999998764 3344443
No 271
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=81.77 E-value=0.82 Score=26.73 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=14.5
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.+|+|+||+||++..
T Consensus 11 ~~lg~G~~~~v~~~~~ 26 (288)
T cd05093 11 RELGEGAFGKVFLAEC 26 (288)
T ss_pred cccCCcCCeeEEeeEe
Confidence 6899999999999975
No 272
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=81.68 E-value=0.93 Score=26.71 Aligned_cols=21 Identities=38% Similarity=0.637 Sum_probs=16.3
Q ss_pred hhhccCCCceeeeeEe-CCCcc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~ 81 (83)
..+|+|++|.||++.- .+++.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~ 47 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQE 47 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcE
Confidence 5789999999999985 34443
No 273
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=81.50 E-value=1 Score=25.30 Aligned_cols=21 Identities=43% Similarity=0.956 Sum_probs=16.7
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
+.||+|++|.+|++... +++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~ 27 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKE 27 (253)
T ss_pred eeeccCCceEEEEEEECCCCcE
Confidence 46899999999999985 4543
No 274
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=81.20 E-value=0.97 Score=25.86 Aligned_cols=17 Identities=41% Similarity=0.710 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.||++...
T Consensus 6 ~~ig~g~~g~v~~~~~~ 22 (260)
T cd08222 6 QRLGKGSFGTVYLVKDK 22 (260)
T ss_pred eeecCCCCceEEEEEec
Confidence 46899999999998664
No 275
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=80.95 E-value=1.1 Score=26.75 Aligned_cols=22 Identities=36% Similarity=0.581 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeCC-Cccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~v 82 (83)
..||.|++|.||++...+ |+.+
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~ 28 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKV 28 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEE
Confidence 468999999999998753 4433
No 276
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=80.77 E-value=1.4 Score=26.00 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=16.4
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||.|++|.||++... ++..
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~ 49 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQ 49 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCE
Confidence 57899999999999863 3443
No 277
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=80.55 E-value=0.51 Score=32.19 Aligned_cols=18 Identities=28% Similarity=0.680 Sum_probs=16.0
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..+|+|.||.||+|+.++
T Consensus 492 ~eLGegaFGkVf~a~~~~ 509 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYG 509 (774)
T ss_pred hhhcCchhhhhhhhhccC
Confidence 689999999999998754
No 278
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=79.85 E-value=1 Score=26.30 Aligned_cols=16 Identities=38% Similarity=0.675 Sum_probs=13.8
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|++|.||++..
T Consensus 6 ~~ig~G~~~~vy~~~~ 21 (288)
T cd05583 6 RVLGTGAYGKVFLVRK 21 (288)
T ss_pred EEeccCCCceEEEEEE
Confidence 4689999999999875
No 279
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=79.73 E-value=0.92 Score=26.85 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|+||.||++..
T Consensus 41 ~~ig~G~~g~V~~~~~ 56 (302)
T cd05055 41 KTLGAGAFGKVVEATA 56 (302)
T ss_pred ceeeccCCeeEEEEEE
Confidence 7899999999999864
No 280
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=79.35 E-value=1.4 Score=29.13 Aligned_cols=20 Identities=40% Similarity=0.665 Sum_probs=16.7
Q ss_pred hhHh--hhhccCCCceeeeeEe
Q 047075 57 NSFK--YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l 76 (83)
+.|. .++|+|+|.+||+|.=
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~ 94 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLARE 94 (604)
T ss_pred hhcchhheeccccceeEEEeee
Confidence 4455 8999999999999875
No 281
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=79.15 E-value=1.5 Score=28.84 Aligned_cols=23 Identities=22% Similarity=0.401 Sum_probs=20.4
Q ss_pred hhhccCCCceeeeeEeCCCcccC
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
.-|+..+.|.||+|++++|+.||
T Consensus 167 ~piaaASlaQVhrA~L~~G~~Va 189 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVA 189 (538)
T ss_pred chhhhcchhheEEEEecCCCEEE
Confidence 67899999999999999998664
No 282
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=79.00 E-value=1.5 Score=26.46 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeC-CCcc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~ 81 (83)
..||+|++|.+|+|... +++.
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~ 42 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRK 42 (343)
T ss_pred EEeccCCceEEEEEEECCCCcE
Confidence 68899999999999885 3443
No 283
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=78.68 E-value=1.3 Score=25.88 Aligned_cols=20 Identities=35% Similarity=0.496 Sum_probs=16.4
Q ss_pred hhhccCCCceeeeeEeC-CCc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~ 80 (83)
+.||+|++|.+|++... +++
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~ 45 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGR 45 (285)
T ss_pred eEeccCCCeEEEEEEECCCCC
Confidence 68999999999999863 444
No 284
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=78.52 E-value=1.1 Score=29.67 Aligned_cols=23 Identities=39% Similarity=0.502 Sum_probs=18.1
Q ss_pred hhhccCCCceeeeeEeC-CCcccC
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~vA 83 (83)
+.||+|+||.|-||.=. .++.||
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VA 215 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVA 215 (586)
T ss_pred EEecccccceeEEEEecCCCcEEE
Confidence 68999999999999763 355554
No 285
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=78.42 E-value=1.7 Score=26.32 Aligned_cols=22 Identities=32% Similarity=0.425 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
..||+|++|.||++.-. +|..+
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~v 44 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNV 44 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEE
Confidence 68999999999999863 44433
No 286
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=78.27 E-value=1.7 Score=27.06 Aligned_cols=22 Identities=41% Similarity=0.668 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
..||+|+||+||.|.- ..|..+
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~v 45 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKV 45 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeE
Confidence 6789999999999965 344444
No 287
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=78.26 E-value=1.6 Score=25.71 Aligned_cols=22 Identities=36% Similarity=0.608 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
..+|.|++|+||++.- .+|+.+
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v 47 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEV 47 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEE
Confidence 5789999999999975 345443
No 288
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=78.00 E-value=1.3 Score=26.11 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||++..
T Consensus 21 ~~lg~G~~g~Vy~~~~ 36 (304)
T cd05101 21 KPLGEGCFGQVVMAEA 36 (304)
T ss_pred ceeeccCCceEEEEEE
Confidence 6899999999999864
No 289
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=77.57 E-value=1.3 Score=26.32 Aligned_cols=16 Identities=31% Similarity=0.659 Sum_probs=14.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|++|.||++.-
T Consensus 18 ~~lg~G~~g~vy~~~~ 33 (314)
T cd05099 18 KPLGEGCFGQVVRAEA 33 (314)
T ss_pred eeecCCCcccEEEeee
Confidence 6899999999999863
No 290
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=77.39 E-value=1.7 Score=24.94 Aligned_cols=17 Identities=41% Similarity=0.712 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||.|++|.||+|.-.
T Consensus 6 ~~ig~g~~~~v~~a~~~ 22 (267)
T cd06628 6 ALIGSGSFGSVYLGMNA 22 (267)
T ss_pred ceeecCCCeEEEEEEec
Confidence 46899999999999863
No 291
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=77.31 E-value=1.8 Score=25.92 Aligned_cols=17 Identities=41% Similarity=0.669 Sum_probs=14.7
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.||++...
T Consensus 6 ~~lg~G~~g~vy~~~~~ 22 (332)
T cd07857 6 KELGQGAYGIVCSARNA 22 (332)
T ss_pred EEccccCCeEEEEEEeC
Confidence 46899999999999874
No 292
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=77.12 E-value=2.1 Score=26.74 Aligned_cols=23 Identities=39% Similarity=0.612 Sum_probs=18.5
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..||+|.+|.|.++.- ++|+.||
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VA 51 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVA 51 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEee
Confidence 5789999999999987 4566655
No 293
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=76.81 E-value=1.5 Score=29.99 Aligned_cols=19 Identities=32% Similarity=0.656 Sum_probs=16.5
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
+.|-+|+|++||.+...++
T Consensus 43 ~vLAEGGFa~VYla~~~~~ 61 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKG 61 (738)
T ss_pred EEEccCCcEEEEEEEecCC
Confidence 6889999999999998654
No 294
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=76.81 E-value=1.6 Score=24.63 Aligned_cols=17 Identities=47% Similarity=0.856 Sum_probs=14.7
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|.+|.+|++...
T Consensus 6 ~~l~~g~~~~v~~~~~~ 22 (254)
T cd06627 6 DLIGRGAFGVVYKGLNL 22 (254)
T ss_pred eEEcccCCeEEEEEEEc
Confidence 46899999999999874
No 295
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=76.70 E-value=1.6 Score=25.78 Aligned_cols=17 Identities=29% Similarity=0.526 Sum_probs=14.5
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.+|+|++|.||++...
T Consensus 7 ~~l~~g~~~~v~~~~~~ 23 (305)
T cd05609 7 KLISNGAYGAVYLVRHK 23 (305)
T ss_pred eEeecCCCeeEEEEEEC
Confidence 46899999999999864
No 296
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=76.69 E-value=1.5 Score=25.58 Aligned_cols=18 Identities=44% Similarity=0.639 Sum_probs=15.3
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||.|.+|.||++...+
T Consensus 7 ~~lg~g~~~~v~~~~~~~ 24 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKN 24 (287)
T ss_pred EEeccCCceEEEEEEECC
Confidence 468999999999999843
No 297
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=76.60 E-value=1.5 Score=26.32 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=14.1
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|+||.||++.-
T Consensus 18 ~~ig~G~~g~v~~~~~ 33 (334)
T cd05100 18 KPLGEGCFGQVVMAEA 33 (334)
T ss_pred ceeccccCCcEEEEEE
Confidence 6899999999999863
No 298
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=76.12 E-value=1.7 Score=24.67 Aligned_cols=17 Identities=24% Similarity=0.372 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.||+|++|.+|++.-.
T Consensus 6 ~~lg~g~~~~v~~~~~~ 22 (256)
T cd08220 6 RVVGRGAFGIVHLCRRK 22 (256)
T ss_pred EEecccCceEEEEEEEc
Confidence 46899999999998763
No 299
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=75.60 E-value=1.4 Score=25.82 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||+|++|.||++..
T Consensus 11 ~~lg~g~~g~vy~~~~ 26 (291)
T cd05094 11 RELGEGAFGKVFLAEC 26 (291)
T ss_pred eeecccCCCeEEEeEe
Confidence 6899999999999874
No 300
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=75.54 E-value=0.55 Score=30.59 Aligned_cols=15 Identities=47% Similarity=0.851 Sum_probs=13.8
Q ss_pred hhhccCCCceeeeeE
Q 047075 61 YKLGQGGYGSVYKGK 75 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~ 75 (83)
+++|+|+|..|||+-
T Consensus 469 hLLGrGGFSEVyKAF 483 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAF 483 (775)
T ss_pred HHhccccHHHHHHhc
Confidence 789999999999984
No 301
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=74.98 E-value=2.1 Score=24.24 Aligned_cols=20 Identities=65% Similarity=0.991 Sum_probs=15.4
Q ss_pred hhhccCCCceeeeeEeC-CCc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~ 80 (83)
+.||+|++|.+|++.-. +|+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~ 26 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQ 26 (256)
T ss_pred eeecCCCceeEEEEEECCCCC
Confidence 46899999999998753 444
No 302
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=74.95 E-value=2.1 Score=24.39 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.||++.-.
T Consensus 6 ~~lg~g~~g~v~~~~~~ 22 (255)
T cd08219 6 RVVGEGSFGRALLVQHV 22 (255)
T ss_pred EEeeccCCeEEEEEEEc
Confidence 46899999999998763
No 303
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=74.57 E-value=2.1 Score=24.16 Aligned_cols=17 Identities=29% Similarity=0.653 Sum_probs=14.6
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||+|++|.+|++...
T Consensus 6 ~~l~~g~~~~v~~~~~~ 22 (258)
T cd08215 6 KQIGKGSFGKVYLVRRK 22 (258)
T ss_pred eeeccCCCeEEEEEEEc
Confidence 36799999999999875
No 304
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=74.35 E-value=2 Score=24.40 Aligned_cols=18 Identities=28% Similarity=0.421 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..+|+|++|.||++....
T Consensus 6 ~~lg~g~~~~v~~~~~~~ 23 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRT 23 (257)
T ss_pred EEecCCCCeEEEEEEEcC
Confidence 367999999999998743
No 305
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=74.07 E-value=1.5 Score=29.31 Aligned_cols=23 Identities=35% Similarity=0.534 Sum_probs=17.5
Q ss_pred hhhhccCCCceeeeeEeC-CCccc
Q 047075 60 KYKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 60 ~~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
+.++|+|.|=+||||.-. .|..|
T Consensus 45 ~evLGrGafKtVYka~De~~giEV 68 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEV 68 (632)
T ss_pred hhhcccccceeeeeccccccchhh
Confidence 378999999999999753 34444
No 306
>PHA03207 serine/threonine kinase US3; Provisional
Probab=73.97 E-value=3.1 Score=25.76 Aligned_cols=16 Identities=25% Similarity=0.310 Sum_probs=14.3
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..||+|++|.||++..
T Consensus 98 ~~Lg~G~~g~Vy~~~~ 113 (392)
T PHA03207 98 SSLTPGSEGEVFVCTK 113 (392)
T ss_pred EeecCCCCeEEEEEEE
Confidence 6789999999999875
No 307
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=73.88 E-value=1.5 Score=25.45 Aligned_cols=15 Identities=33% Similarity=0.410 Sum_probs=12.7
Q ss_pred hhhccCCCceeeeeE
Q 047075 61 YKLGQGGYGSVYKGK 75 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~ 75 (83)
..||+|+||+||.+.
T Consensus 10 ~~lg~g~~g~v~~~~ 24 (283)
T cd05080 10 RVLGEGHFGKVSLYC 24 (283)
T ss_pred eecccCCCcEEEEee
Confidence 578999999997754
No 308
>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function.
Probab=72.53 E-value=4.5 Score=28.02 Aligned_cols=9 Identities=0% Similarity=-0.168 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q 047075 12 IAFYFRRKF 20 (83)
Q Consensus 12 ~~~~~~~~~ 20 (83)
+++++++++
T Consensus 290 L~vLl~yCr 298 (807)
T PF10577_consen 290 LCVLLCYCR 298 (807)
T ss_pred HHHHHHhhh
Confidence 333333333
No 309
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=71.23 E-value=1.5 Score=28.69 Aligned_cols=20 Identities=35% Similarity=0.775 Sum_probs=16.4
Q ss_pred hHh--hhhccCCCceeeeeEeC
Q 047075 58 SFK--YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 58 ~f~--~~ig~g~~g~vYk~~l~ 77 (83)
.|. -++|+|+||.||-++..
T Consensus 186 ~F~~~RvlGkGGFGEV~acqvr 207 (591)
T KOG0986|consen 186 TFRVYRVLGKGGFGEVCACQVR 207 (591)
T ss_pred ceeeeEEEecccccceeEEEEe
Confidence 355 58999999999988774
No 310
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=69.66 E-value=2.1 Score=29.71 Aligned_cols=15 Identities=47% Similarity=0.928 Sum_probs=13.3
Q ss_pred hhccCCCceeeeeEe
Q 047075 62 KLGQGGYGSVYKGKL 76 (83)
Q Consensus 62 ~ig~g~~g~vYk~~l 76 (83)
++|+|.+|+||-|.-
T Consensus 582 VLGKGTYG~VYA~RD 596 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARD 596 (1226)
T ss_pred EeecCceeEEEeecc
Confidence 789999999998864
No 311
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=68.82 E-value=3.6 Score=29.35 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..||.|+||+||++...
T Consensus 19 ~kLG~GgFGtVYLAkdk 35 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHK 35 (1021)
T ss_pred EEEecCCCeEEEEEEEC
Confidence 68899999999999764
No 312
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=68.14 E-value=0.72 Score=27.91 Aligned_cols=18 Identities=39% Similarity=0.804 Sum_probs=15.6
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.||+|.||.|+||.-.+
T Consensus 23 ~kigqGtfgeVFkAr~~n 40 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKN 40 (376)
T ss_pred HhcCCchHHHHHHHhhcC
Confidence 689999999999998754
No 313
>PF05083 LST1: LST-1 protein; InterPro: IPR007775 B144/LST1 is a gene encoded in the human major histocompatibility complex that produces multiple forms of alternatively spliced mRNA and encodes peptides fewer than 100 amino acids in length. B144/LST1 is strongly expressed in dendritic cells. Transfection of B144/LST1 into a variety of cells induces morphologic changes including the production of long, thin filopodia []. A possible role in modulating immune responses. Induces morphological changes including production of filopodia and microspikes when overexpressed in a variety of cell types and may be involved in dendritic cell maturation. Isoform 1 and isoform 2 have an inhibitory effect on lymphocyte proliferation [, ]. ; GO: 0000902 cell morphogenesis, 0006955 immune response, 0016020 membrane
Probab=67.97 E-value=12 Score=17.82 Aligned_cols=14 Identities=7% Similarity=0.173 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHh
Q 047075 9 LIFIAFYFRRKFSS 22 (83)
Q Consensus 9 ~~~~~~~~~~~~~~ 22 (83)
++++.++++...++
T Consensus 9 vvll~~clC~lsrR 22 (74)
T PF05083_consen 9 VVLLSACLCRLSRR 22 (74)
T ss_pred HHHHHHHHHHHHhh
Confidence 33333444433333
No 314
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=67.20 E-value=13 Score=17.93 Aligned_cols=6 Identities=17% Similarity=0.191 Sum_probs=2.3
Q ss_pred HHHHhh
Q 047075 18 RKFSSY 23 (83)
Q Consensus 18 ~~~~~~ 23 (83)
.+++.+
T Consensus 24 lHY~~k 29 (75)
T TIGR02976 24 LHYRSK 29 (75)
T ss_pred HHHHhh
Confidence 344433
No 315
>PRK10345 hypothetical protein; Provisional
Probab=67.18 E-value=2.9 Score=23.99 Aligned_cols=13 Identities=31% Similarity=0.462 Sum_probs=11.9
Q ss_pred hhhccCCCceeee
Q 047075 61 YKLGQGGYGSVYK 73 (83)
Q Consensus 61 ~~ig~g~~g~vYk 73 (83)
..||+|+++.||.
T Consensus 8 ~~LG~G~~~~Vy~ 20 (210)
T PRK10345 8 SPLGTGRHRKCYA 20 (210)
T ss_pred ceecCCCceEEEE
Confidence 5899999999996
No 316
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=66.36 E-value=6.6 Score=24.07 Aligned_cols=17 Identities=6% Similarity=0.104 Sum_probs=10.0
Q ss_pred HHHHHHHHHHhhcCCcc
Q 047075 12 IAFYFRRKFSSYNSTES 28 (83)
Q Consensus 12 ~~~~~~~~~~~~~~~~~ 28 (83)
++++..+...|.|++..
T Consensus 270 LIMvIIYLILRYRRKKK 286 (299)
T PF02009_consen 270 LIMVIIYLILRYRRKKK 286 (299)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 34444566677776654
No 317
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=66.24 E-value=4.9 Score=22.86 Aligned_cols=17 Identities=41% Similarity=0.929 Sum_probs=15.0
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..+|.|++|.+|++...
T Consensus 9 ~~l~~g~~~~v~~~~~~ 25 (262)
T cd06613 9 QRIGSGTYGDVYKARDI 25 (262)
T ss_pred EEecCCCceEEEEeEec
Confidence 57899999999999874
No 318
>TIGR02205 septum_zipA cell division protein ZipA. This model represents the full length of bacterial cell division protein ZipA. The N-terminal hydrophobic stretch is an uncleaved signal-anchor sequence. This is followed by an unconserved, variable length, low complexity region, and then a conserved C-terminal region of about 140 amino acids (see pfam04354) that interacts with the tubulin-like cell division protein FtsZ.
Probab=66.21 E-value=4.7 Score=24.50 Aligned_cols=18 Identities=33% Similarity=0.635 Sum_probs=8.8
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 047075 4 IAIGILIFIAFYFRRKFS 21 (83)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (83)
+++++++++++++--+|.
T Consensus 7 IIvGaiaI~aLl~hGlwt 24 (284)
T TIGR02205 7 IIVGILAIAALLFHGLWT 24 (284)
T ss_pred HHHHHHHHHHHHHccccc
Confidence 344555555555444443
No 319
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=66.20 E-value=14 Score=17.86 Aligned_cols=8 Identities=13% Similarity=-0.105 Sum_probs=3.4
Q ss_pred HHHHHhhc
Q 047075 17 RRKFSSYN 24 (83)
Q Consensus 17 ~~~~~~~~ 24 (83)
+.+++.++
T Consensus 23 ~lHY~sk~ 30 (75)
T PF06667_consen 23 ILHYRSKW 30 (75)
T ss_pred HHHHHHhc
Confidence 34444443
No 320
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=64.46 E-value=4.6 Score=22.98 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=13.1
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+.||.|++|.+|.+.-
T Consensus 6 ~~ig~g~~g~v~~~~~ 21 (256)
T cd08221 6 RVLGKGAFGEATLYRR 21 (256)
T ss_pred eEecccCCceEEEEEE
Confidence 4689999998887765
No 321
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=64.42 E-value=5.9 Score=26.66 Aligned_cols=22 Identities=27% Similarity=0.353 Sum_probs=17.9
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
..||+|+...|||+.-.+.+..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iy 388 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIY 388 (677)
T ss_pred HhhcCCCcceeeeeecCCCcch
Confidence 5789999999999988665543
No 322
>COG4744 Uncharacterized conserved protein [Function unknown]
Probab=64.01 E-value=17 Score=18.99 Aligned_cols=18 Identities=44% Similarity=0.990 Sum_probs=11.4
Q ss_pred hhccC---CCceeeeeEeCCCcc
Q 047075 62 KLGQG---GYGSVYKGKLLDGRN 81 (83)
Q Consensus 62 ~ig~g---~~g~vYk~~l~~g~~ 81 (83)
.+|.| ..|++|+ +.+|..
T Consensus 89 ~iggg~g~~lGt~yR--~adgr~ 109 (121)
T COG4744 89 RIGGGTGEALGTAYR--LADGRV 109 (121)
T ss_pred cccCcccceeeeEEe--cCCCeE
Confidence 45555 4689998 555553
No 323
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=62.53 E-value=6.3 Score=23.62 Aligned_cols=20 Identities=30% Similarity=0.318 Sum_probs=14.8
Q ss_pred ccCCCceeeeeEe-CCCcccC
Q 047075 64 GQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 64 g~g~~g~vYk~~l-~~g~~vA 83 (83)
|.|++++||++.- ++|+.+|
T Consensus 9 g~~~~~~v~~a~~~~~~~~va 29 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVT 29 (328)
T ss_pred cccCceeEEEEEEcCCCcEEE
Confidence 6789999999986 3565543
No 324
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=60.67 E-value=4.3 Score=26.01 Aligned_cols=17 Identities=6% Similarity=0.008 Sum_probs=14.8
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
+.+|+|++|.||++.-.
T Consensus 73 ~~lg~G~~g~vy~a~~~ 89 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRG 89 (478)
T ss_pred EEEEeCCCcEEEEEEEc
Confidence 68999999999999753
No 325
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=60.50 E-value=5.7 Score=24.54 Aligned_cols=22 Identities=27% Similarity=0.526 Sum_probs=16.8
Q ss_pred hhhccCCCceeeeeEeC-CCccc
Q 047075 61 YKLGQGGYGSVYKGKLL-DGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~-~g~~v 82 (83)
.-||.|.||.|+..+-| +|+.+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrv 81 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRV 81 (449)
T ss_pred CcccccceeEEEeccCCCCccch
Confidence 47899999999977765 45544
No 326
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=59.25 E-value=7.5 Score=27.29 Aligned_cols=22 Identities=45% Similarity=0.744 Sum_probs=16.1
Q ss_pred hhhccCCCcee-eeeEeCCCcccC
Q 047075 61 YKLGQGGYGSV-YKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~v-Yk~~l~~g~~vA 83 (83)
+++|.|+.|++ |+|.++ |+.||
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VA 537 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVA 537 (903)
T ss_pred HHcccCCCCcEEEEEeeC-Cceeh
Confidence 68888888875 899994 44444
No 327
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=59.01 E-value=7.2 Score=22.43 Aligned_cols=20 Identities=30% Similarity=0.488 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
..+++|+++.||.+.+.++.
T Consensus 28 ~~L~KG~~s~Vyl~~~~~~~ 47 (201)
T COG2112 28 KELAKGTTSVVYLGEWRGGE 47 (201)
T ss_pred hhhhcccccEEEEeeccCce
Confidence 57899999999999886654
No 328
>PRK09458 pspB phage shock protein B; Provisional
Probab=58.66 E-value=19 Score=17.46 Aligned_cols=7 Identities=14% Similarity=0.178 Sum_probs=2.9
Q ss_pred HHHHhhc
Q 047075 18 RKFSSYN 24 (83)
Q Consensus 18 ~~~~~~~ 24 (83)
.+++.|+
T Consensus 24 LHY~sk~ 30 (75)
T PRK09458 24 LHYRSKR 30 (75)
T ss_pred Hhhcccc
Confidence 3444433
No 329
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=58.20 E-value=8.7 Score=24.38 Aligned_cols=19 Identities=32% Similarity=0.628 Sum_probs=15.2
Q ss_pred hhHh--hhhccCCCceeeeeE
Q 047075 57 NSFK--YKLGQGGYGSVYKGK 75 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~ 75 (83)
++|. .++|+|.||.|..+.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~r 188 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCR 188 (516)
T ss_pred chhhHHHHhcCCccceEEEEe
Confidence 4566 799999999997654
No 330
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=57.97 E-value=6.7 Score=27.68 Aligned_cols=16 Identities=50% Similarity=1.012 Sum_probs=14.1
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..+|+|+||+||-|.-
T Consensus 1000 relg~gsfg~Vy~g~~ 1015 (1025)
T KOG4258|consen 1000 RELGQGSFGMVYEGNA 1015 (1025)
T ss_pred hhhccCccceEEEecC
Confidence 6889999999998864
No 331
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=57.82 E-value=13 Score=24.09 Aligned_cols=18 Identities=39% Similarity=0.589 Sum_probs=16.1
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
..+|.|..|+||.+++.+
T Consensus 83 k~LG~GdiG~VyL~~l~~ 100 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRG 100 (459)
T ss_pred HHcCCCCceeEEEEEecC
Confidence 678999999999999854
No 332
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=56.62 E-value=5.2 Score=26.11 Aligned_cols=23 Identities=26% Similarity=0.307 Sum_probs=18.6
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
++||.|..++||+|.- |.++.||
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VA 55 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVA 55 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEE
Confidence 6899999999999854 7666654
No 333
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=55.45 E-value=8.3 Score=23.10 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=13.7
Q ss_pred ccCCCceeeeeEe-CCCcccC
Q 047075 64 GQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 64 g~g~~g~vYk~~l-~~g~~vA 83 (83)
|.+++++||++.. ++|+.+|
T Consensus 9 G~~~~~~v~~~~~~~~~~~va 29 (327)
T cd08227 9 GFEDLMTVNLARYKPTGEYVT 29 (327)
T ss_pred cccceEEEEEEeecccCcEEE
Confidence 4447899999987 4565543
No 334
>PRK14051 negative regulator GrlR; Provisional
Probab=55.36 E-value=6.4 Score=20.40 Aligned_cols=19 Identities=32% Similarity=0.508 Sum_probs=16.2
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
+.|.-|.++.+|.|.+.+.
T Consensus 29 nkInGGD~~~~YqG~isEd 47 (123)
T PRK14051 29 NMITGGDIASVYQGVLSED 47 (123)
T ss_pred CEecCCccceEEecccccc
Confidence 6788899999999998654
No 335
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=55.18 E-value=12 Score=27.42 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=16.9
Q ss_pred hhHh--hhhccCCCceeeeeEeC
Q 047075 57 NSFK--YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 57 ~~f~--~~ig~g~~g~vYk~~l~ 77 (83)
+.|. .+||+|+||.|....+.
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k 97 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHK 97 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEee
Confidence 3455 79999999999988774
No 336
>TIGR01624 LRP1_Cterm LRP1 C-terminal domain. This model represents a tightly conserved small domain found in LRP1 and related plant proteins. This family also contains a well-conserved putative zinc finger domain (TIGR01623). The rest of the sequence of most members consists of highly divergent, low-complexity sequence.
Probab=53.90 E-value=11 Score=16.62 Aligned_cols=10 Identities=60% Similarity=0.939 Sum_probs=8.3
Q ss_pred ceeeeeEeCC
Q 047075 69 GSVYKGKLLD 78 (83)
Q Consensus 69 g~vYk~~l~~ 78 (83)
|+|+||.|-|
T Consensus 38 GHvFkGiLyD 47 (50)
T TIGR01624 38 GHVFKGFLHD 47 (50)
T ss_pred ceEEeeEEec
Confidence 8999999854
No 337
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=53.86 E-value=5.5 Score=29.44 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
+.||.|.||.||-++= ++|...
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGell 1263 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELL 1263 (1509)
T ss_pred cccCCcceeeeEEeecCCccchh
Confidence 7899999999999875 456543
No 338
>PTZ00046 rifin; Provisional
Probab=53.26 E-value=22 Score=22.47 Aligned_cols=16 Identities=6% Similarity=0.052 Sum_probs=9.7
Q ss_pred HHHHHHHHHhhcCCcc
Q 047075 13 AFYFRRKFSSYNSTES 28 (83)
Q Consensus 13 ~~~~~~~~~~~~~~~~ 28 (83)
+++..+...|.|++..
T Consensus 330 IMvIIYLILRYRRKKK 345 (358)
T PTZ00046 330 IMVIIYLILRYRRKKK 345 (358)
T ss_pred HHHHHHHHHHhhhcch
Confidence 3344566678777654
No 339
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=52.81 E-value=23 Score=22.39 Aligned_cols=16 Identities=6% Similarity=0.052 Sum_probs=9.7
Q ss_pred HHHHHHHHHhhcCCcc
Q 047075 13 AFYFRRKFSSYNSTES 28 (83)
Q Consensus 13 ~~~~~~~~~~~~~~~~ 28 (83)
+++..+...|.|++..
T Consensus 325 IMvIIYLILRYRRKKK 340 (353)
T TIGR01477 325 IMVIIYLILRYRRKKK 340 (353)
T ss_pred HHHHHHHHHHhhhcch
Confidence 3344566678877654
No 340
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=52.52 E-value=15 Score=25.24 Aligned_cols=20 Identities=35% Similarity=0.612 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
+-+|.|+.|.|+.|.|.+..
T Consensus 130 eWlGSGaQGAVF~Grl~net 149 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNET 149 (904)
T ss_pred hhhccCcccceeeeeccCce
Confidence 56899999999999996644
No 341
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=52.51 E-value=1.6 Score=26.35 Aligned_cols=20 Identities=25% Similarity=0.401 Sum_probs=15.9
Q ss_pred hhhccCCCceeeeeEe-CCCc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~ 80 (83)
++||+|.|+.||+..- |.|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~ 37 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGL 37 (355)
T ss_pred HHHccCchHHHHHHHhccchH
Confidence 7899999999998754 5554
No 342
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=52.00 E-value=7.4 Score=23.10 Aligned_cols=23 Identities=39% Similarity=0.563 Sum_probs=17.4
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..+|+|++|.|-|-.+ ++|+.+|
T Consensus 52 ~elGrGayG~vekmrh~~sg~imA 75 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMA 75 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEE
Confidence 6899999999877655 6676543
No 343
>COG3115 ZipA Cell division protein [Cell division and chromosome partitioning]
Probab=51.88 E-value=19 Score=22.24 Aligned_cols=18 Identities=22% Similarity=0.486 Sum_probs=8.1
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 047075 4 IAIGILIFIAFYFRRKFS 21 (83)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (83)
+++++++++++++-..|.
T Consensus 9 IIvG~IAIiaLLvhGlWt 26 (324)
T COG3115 9 IIVGAIAIIALLVHGLWT 26 (324)
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 344444444444443443
No 344
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=51.29 E-value=13 Score=25.53 Aligned_cols=23 Identities=30% Similarity=0.426 Sum_probs=19.3
Q ss_pred hhhccCCCceeeeeEeCCCcccC
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~vA 83 (83)
+.||+|.||.|-.+++.++..||
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVA 566 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVA 566 (807)
T ss_pred hhhcCcccceeEEEEecCceEEE
Confidence 78999999999999987766554
No 345
>PF05142 DUF702: Domain of unknown function (DUF702) ; InterPro: IPR007818 This is a family of plant proteins of unknown function.
Probab=49.71 E-value=11 Score=20.86 Aligned_cols=10 Identities=60% Similarity=1.042 Sum_probs=8.5
Q ss_pred ceeeeeEeCC
Q 047075 69 GSVYKGKLLD 78 (83)
Q Consensus 69 g~vYk~~l~~ 78 (83)
|+|+||.|-|
T Consensus 139 GHVFKGiLYD 148 (154)
T PF05142_consen 139 GHVFKGILYD 148 (154)
T ss_pred CEEeeeeeec
Confidence 8999999954
No 346
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=48.48 E-value=9.5 Score=24.26 Aligned_cols=23 Identities=39% Similarity=0.817 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeE-eCCCcccC
Q 047075 61 YKLGQGGYGSVYKGK-LLDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~-l~~g~~vA 83 (83)
..||+|+||..+.|+ |-+++.||
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VA 57 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVA 57 (449)
T ss_pred cccccCcceeeecccccccCceEE
Confidence 689999999999875 34565554
No 347
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=48.16 E-value=19 Score=22.43 Aligned_cols=22 Identities=32% Similarity=0.558 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEeCC-Cccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~v 82 (83)
..+|.|+.|.|.|..... |..+
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~ii 120 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHII 120 (391)
T ss_pred HhhcCCCccceEEEEEcccceEE
Confidence 578999999999998854 4443
No 348
>PHA03240 envelope glycoprotein M; Provisional
Probab=47.79 E-value=22 Score=20.99 Aligned_cols=6 Identities=17% Similarity=0.046 Sum_probs=2.2
Q ss_pred HHHHHH
Q 047075 13 AFYFRR 18 (83)
Q Consensus 13 ~~~~~~ 18 (83)
++++++
T Consensus 226 IIL~cf 231 (258)
T PHA03240 226 IILFFF 231 (258)
T ss_pred HHHHHH
Confidence 333333
No 349
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=47.29 E-value=12 Score=25.03 Aligned_cols=17 Identities=41% Similarity=0.726 Sum_probs=15.2
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..+|+|.||.|++|.+.
T Consensus 302 ~~lg~g~fG~v~~~~~~ 318 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLF 318 (609)
T ss_pred ceeecccccceEeEEEe
Confidence 58999999999999873
No 350
>PF15345 TMEM51: Transmembrane protein 51
Probab=45.58 E-value=18 Score=21.41 Aligned_cols=7 Identities=14% Similarity=0.624 Sum_probs=3.6
Q ss_pred eHHHHHH
Q 047075 48 GYADIKK 54 (83)
Q Consensus 48 ~~~~l~~ 54 (83)
+|+|++.
T Consensus 126 SYEEvv~ 132 (233)
T PF15345_consen 126 SYEEVVN 132 (233)
T ss_pred ChHHHHh
Confidence 4555443
No 351
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=45.20 E-value=5.5 Score=25.94 Aligned_cols=29 Identities=21% Similarity=0.462 Sum_probs=20.6
Q ss_pred ceeeHHHHHHHhhhHhhhhccCCCceeeeeEeCC
Q 047075 45 KRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 45 ~~~~~~~l~~~t~~f~~~ig~g~~g~vYk~~l~~ 78 (83)
++|+.+|.+ +...||+|....||-+.+++
T Consensus 152 skFtiddye-----iG~~igkGC~AaVY~A~~~~ 180 (598)
T KOG4158|consen 152 SKFTIDDYE-----IGEFIGKGCNAAVYSARLAN 180 (598)
T ss_pred cccchhhhc-----ccchhhccchhhhhhhhcCC
Confidence 445555533 22678999999999999964
No 352
>PHA03265 envelope glycoprotein D; Provisional
Probab=44.81 E-value=19 Score=22.87 Aligned_cols=7 Identities=0% Similarity=-0.140 Sum_probs=2.6
Q ss_pred HHHHHHh
Q 047075 16 FRRKFSS 22 (83)
Q Consensus 16 ~~~~~~~ 22 (83)
++.+|||
T Consensus 368 l~~~~rr 374 (402)
T PHA03265 368 LYVCLRR 374 (402)
T ss_pred HHHHhhh
Confidence 3333333
No 353
>PRK03427 cell division protein ZipA; Provisional
Probab=44.00 E-value=36 Score=21.41 Aligned_cols=16 Identities=19% Similarity=0.407 Sum_probs=7.4
Q ss_pred hHHHHHHHHHHHHHHH
Q 047075 5 AIGILIFIAFYFRRKF 20 (83)
Q Consensus 5 ~~~~~~~~~~~~~~~~ 20 (83)
+++.++++++++--.|
T Consensus 11 vvGAIAIiAlL~HGlW 26 (333)
T PRK03427 11 IVGAIAIIALLVHGFW 26 (333)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 4444445555543334
No 354
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=42.93 E-value=19 Score=21.02 Aligned_cols=21 Identities=14% Similarity=0.088 Sum_probs=16.4
Q ss_pred hhhc-cCCCceeeeeEeCCCcc
Q 047075 61 YKLG-QGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 61 ~~ig-~g~~g~vYk~~l~~g~~ 81 (83)
.++| .|+.|++|+...++++.
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~ 58 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNW 58 (239)
T ss_pred ceeecCCCCccEEEEEeCCceE
Confidence 5787 89999999988765543
No 355
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=42.74 E-value=18 Score=22.29 Aligned_cols=22 Identities=36% Similarity=0.463 Sum_probs=19.4
Q ss_pred hhhccCCCceeeeeEeCCCccc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~v 82 (83)
+.||.|.=+.||.|.-|+|..+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~ 118 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKV 118 (304)
T ss_pred cccccCccceEEEEECCCCCEE
Confidence 7899999999999999987654
No 356
>cd03690 Tet_II Tet_II: This subfamily represents domain II of ribosomal protection proteins Tet(M) and Tet(O). This domain has homology to domain II of the elongation factors EF-G and EF-2. Tet(M) and Tet(O) catalyze the release of tetracycline (Tc) from the ribosome in a GTP-dependent manner thereby mediating Tc resistance. Tcs are broad-spectrum antibiotics. Typical Tcs bind to the ribosome and inhibit the elongation phase of protein synthesis, by inhibiting the occupation of site A by aminoacyl-tRNA.
Probab=42.12 E-value=10 Score=18.31 Aligned_cols=20 Identities=25% Similarity=0.215 Sum_probs=14.8
Q ss_pred hccCCCceeeeeEeCCCccc
Q 047075 63 LGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 63 ig~g~~g~vYk~~l~~g~~v 82 (83)
.|+=+++.+|.|.+..|+.+
T Consensus 17 ~G~la~~RV~sG~l~~g~~v 36 (85)
T cd03690 17 GERLAYLRLYSGTLRLRDSV 36 (85)
T ss_pred CCeEEEEEEccCEEcCCCEE
Confidence 46667888999999777643
No 357
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=42.11 E-value=6 Score=25.93 Aligned_cols=23 Identities=26% Similarity=0.530 Sum_probs=17.5
Q ss_pred HhhhHh-hhhccCCCceeeeeEeC
Q 047075 55 MTNSFK-YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 55 ~t~~f~-~~ig~g~~g~vYk~~l~ 77 (83)
+-..|+ .-||.|+...||+|.+.
T Consensus 188 iF~efn~~PIGsG~IAQVY~atl~ 211 (565)
T KOG1236|consen 188 IFSEFNREPIGSGCIAQVYRATLK 211 (565)
T ss_pred HHHhcCCcccccchhhhhhhhhhh
Confidence 334444 57999999999999863
No 358
>PF05337 CSF-1: Macrophage colony stimulating factor-1 (CSF-1); InterPro: IPR008001 Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mononuclear phagocytic precursors, blood monocytes, tissue macrophages, osteoclasts, and microglia of the brain, all of which possess cell surface receptors for CSF-1. The protein has also been linked with male fertility [] and mutations in the Csf-1 gene have been found to cause osteopetrosis and failure of tooth eruption [].; GO: 0005125 cytokine activity, 0008083 growth factor activity, 0016021 integral to membrane; PDB: 3EJJ_A.
Probab=41.13 E-value=8.9 Score=23.28 Aligned_cols=12 Identities=0% Similarity=-0.200 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhh
Q 047075 12 IAFYFRRKFSSY 23 (83)
Q Consensus 12 ~~~~~~~~~~~~ 23 (83)
+..+++|+||+|
T Consensus 242 VGGLLfYr~rrR 253 (285)
T PF05337_consen 242 VGGLLFYRRRRR 253 (285)
T ss_dssp ------------
T ss_pred ccceeeeccccc
Confidence 334444444443
No 359
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=39.90 E-value=18 Score=25.31 Aligned_cols=18 Identities=50% Similarity=0.848 Sum_probs=16.1
Q ss_pred hhhccCCCceeeeeEeCC
Q 047075 61 YKLGQGGYGSVYKGKLLD 78 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~ 78 (83)
+.+|-|.||.||-|++..
T Consensus 273 hKLGGGQYGeVYeGvWKk 290 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKK 290 (1157)
T ss_pred eccCCCcccceeeeeeec
Confidence 789999999999999854
No 360
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=39.81 E-value=9.1 Score=26.45 Aligned_cols=16 Identities=44% Similarity=0.908 Sum_probs=14.0
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..+|.|++|.|||+.=
T Consensus 21 qrvgsgTygdvyKaRd 36 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARD 36 (829)
T ss_pred eeecCCcccchhhhcc
Confidence 5789999999999863
No 361
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=39.64 E-value=58 Score=20.92 Aligned_cols=25 Identities=36% Similarity=0.557 Sum_probs=18.9
Q ss_pred eHHHHHHHhhhHhhhhccCCCceeeeeE
Q 047075 48 GYADIKKMTNSFKYKLGQGGYGSVYKGK 75 (83)
Q Consensus 48 ~~~~l~~~t~~f~~~ig~g~~g~vYk~~ 75 (83)
+++|+-+-|. +++|+|.++.|-.++
T Consensus 74 ~F~d~YkLt~---e~LGeGAyasVqtcv 98 (463)
T KOG0607|consen 74 KFEDMYKLTS---ELLGEGAYASVQTCV 98 (463)
T ss_pred hHHHHHHhHH---HHhcCccceeeeeee
Confidence 4677766665 689999999987654
No 362
>PRK01741 cell division protein ZipA; Provisional
Probab=39.46 E-value=31 Score=21.65 Aligned_cols=17 Identities=29% Similarity=0.530 Sum_probs=7.9
Q ss_pred hhHHHHHHHHHHHHHHH
Q 047075 4 IAIGILIFIAFYFRRKF 20 (83)
Q Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (83)
++++++++++++....|
T Consensus 8 iILg~lal~~Lv~hgiW 24 (332)
T PRK01741 8 IILGILALVALVAHGIW 24 (332)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 34455554444444444
No 363
>PHA00451 protein kinase
Probab=39.08 E-value=24 Score=21.77 Aligned_cols=20 Identities=40% Similarity=0.767 Sum_probs=16.3
Q ss_pred hhhccCCCceeeeeEeCCCc
Q 047075 61 YKLGQGGYGSVYKGKLLDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~ 80 (83)
+++|.|.|+..|...|-.|.
T Consensus 71 ~~LGNGHFSAAy~H~lLPgr 90 (362)
T PHA00451 71 NLLGNGHFSAAYSHELLPGR 90 (362)
T ss_pred HHhcCcchhhHhhcccCCCe
Confidence 79999999999987764444
No 364
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=38.96 E-value=13 Score=24.52 Aligned_cols=16 Identities=31% Similarity=0.621 Sum_probs=14.0
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
-++|+|+||.|..++-
T Consensus 355 ~VlGKGSFGKVlLaer 370 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAER 370 (683)
T ss_pred EEeccCccceeeeecc
Confidence 7899999999987764
No 365
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=38.92 E-value=26 Score=20.37 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=16.4
Q ss_pred hhhccCCC-ceeeeeEeCCC
Q 047075 61 YKLGQGGY-GSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~-g~vYk~~l~~g 79 (83)
+.+|.|.. |.|+|..+.+.
T Consensus 43 efLg~g~~~~~V~kv~I~g~ 62 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEIDGR 62 (207)
T ss_pred eecCCCCceeEEEEEEECCe
Confidence 68899999 99999999543
No 366
>PRK04335 cell division protein ZipA; Provisional
Probab=38.69 E-value=30 Score=21.49 Aligned_cols=18 Identities=28% Similarity=0.563 Sum_probs=8.5
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 047075 4 IAIGILIFIAFYFRRKFS 21 (83)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (83)
++++.++++++++--.|-
T Consensus 9 iivGAlAI~ALL~HGlWt 26 (313)
T PRK04335 9 IVVGALAIAALLFHGLWT 26 (313)
T ss_pred HHHHHHHHHHHHHhcccc
Confidence 344445555555444443
No 367
>TIGR03803 Gloeo_Verruco Gloeo_Verruco repeat. This model describes a rare protein repeat, found so far in two species of Verrucomicrobia (Chthoniobacter flavus and Verrucomicrobium spinosum) and in four different proteins of Gloeobacter violaceus PCC7421. In the Verrucomicrobial species, the repeat region is followed by a PEP-CTERM protein-sorting signal, suggesting an extracellular location.
Probab=38.47 E-value=25 Score=14.18 Aligned_cols=13 Identities=31% Similarity=0.853 Sum_probs=9.4
Q ss_pred ccCCCceeeeeEe
Q 047075 64 GQGGYGSVYKGKL 76 (83)
Q Consensus 64 g~g~~g~vYk~~l 76 (83)
|....|++||-..
T Consensus 12 G~~~~GTvf~~~~ 24 (34)
T TIGR03803 12 GASGFGTLYRLST 24 (34)
T ss_pred CCCCceeEEEEcC
Confidence 5677889998554
No 368
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=37.62 E-value=25 Score=22.95 Aligned_cols=23 Identities=35% Similarity=0.494 Sum_probs=17.0
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
..+|+|+||.|-.|.= ..|+.+|
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vA 201 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVA 201 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEE
Confidence 5789999999988864 3455443
No 369
>PHA03030 hypothetical protein; Provisional
Probab=36.87 E-value=53 Score=16.97 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 047075 6 IGILIFIAFYFRRKFS 21 (83)
Q Consensus 6 ~~~~~~~~~~~~~~~~ 21 (83)
+.++++++++++++.+
T Consensus 7 ili~lfifl~iffYI~ 22 (122)
T PHA03030 7 ILIFLFIFLFIFFYIR 22 (122)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 3344444444444443
No 370
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=36.29 E-value=78 Score=17.43 Aligned_cols=8 Identities=13% Similarity=0.260 Sum_probs=4.4
Q ss_pred ceeeeeEe
Q 047075 69 GSVYKGKL 76 (83)
Q Consensus 69 g~vYk~~l 76 (83)
+.-|+..+
T Consensus 116 ~~yYrV~~ 123 (149)
T PF11694_consen 116 DKYYRVIF 123 (149)
T ss_pred CccEEEEE
Confidence 34466666
No 371
>PHA03281 envelope glycoprotein E; Provisional
Probab=35.46 E-value=89 Score=21.35 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=11.7
Q ss_pred hhHhhhhccCCCceeeeeEe
Q 047075 57 NSFKYKLGQGGYGSVYKGKL 76 (83)
Q Consensus 57 ~~f~~~ig~g~~g~vYk~~l 76 (83)
+.|.|.||...-|.-|..-+
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~ 637 (642)
T PHA03281 618 EEFGNAIGAECGGSGYTVYI 637 (642)
T ss_pred hhhccccccccCCcceEEEE
Confidence 45667887654455555444
No 372
>PRK12274 serine/threonine protein kinase; Provisional
Probab=34.73 E-value=30 Score=20.29 Aligned_cols=19 Identities=11% Similarity=0.065 Sum_probs=14.0
Q ss_pred hhhccCCCceeeeeEeCCC
Q 047075 61 YKLGQGGYGSVYKGKLLDG 79 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g 79 (83)
..+++++||+||.+.=++.
T Consensus 8 ~~l~~~~f~~v~~~~~~~~ 26 (218)
T PRK12274 8 EPLKSDTFGRILLVRGGER 26 (218)
T ss_pred eeecCCCcceEEEeecCCc
Confidence 4689999999996554443
No 373
>cd04088 EFG_mtEFG_II EFG_mtEFG_II: this subfamily represents the domain II of elongation factor G (EF-G) in bacteria and, the C-terminus of mitochondrial Elongation factor G1 (mtEFG1) and G2 (mtEFG2)_like proteins found in eukaryotes. During the process of peptide synthesis and tRNA site changes, the ribosome is moved along the mRNA a distance equal to one codon with the addition of each amino acid. In bacteria this translocation step is catalyzed by EF-G_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Eukaryotic cells harbor 2 protein synthesis systems: one localized in the cytoplasm, the other in the mitochondria. Most factors regulating mitochondrial protein synthesis are encoded by nuclear genes, translated in the cytoplasm, and then transported to the mitochondria. The eukaryotic system of elongation factor (EF) components is more compl
Probab=34.37 E-value=18 Score=17.10 Aligned_cols=19 Identities=32% Similarity=0.597 Sum_probs=13.7
Q ss_pred hccCCCceeeeeEeCCCcc
Q 047075 63 LGQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 63 ig~g~~g~vYk~~l~~g~~ 81 (83)
.|+=.++.+|.|.+..|+.
T Consensus 14 ~G~~~~~Rv~sG~l~~g~~ 32 (83)
T cd04088 14 VGKLSFVRVYSGTLKAGST 32 (83)
T ss_pred CceEEEEEEecCEEcCCCE
Confidence 4555678888888876654
No 374
>KOG3482 consensus Small nuclear ribonucleoprotein (snRNP) SMF [RNA processing and modification]
Probab=33.57 E-value=32 Score=16.53 Aligned_cols=11 Identities=45% Similarity=0.764 Sum_probs=8.6
Q ss_pred CCCceeeeeEe
Q 047075 66 GGYGSVYKGKL 76 (83)
Q Consensus 66 g~~g~vYk~~l 76 (83)
=..|+.|||.|
T Consensus 25 LKwg~eYkG~L 35 (79)
T KOG3482|consen 25 LKWGQEYKGTL 35 (79)
T ss_pred EecCcEEEEEE
Confidence 34588999987
No 375
>cd04090 eEF2_II_snRNP Loc2 eEF2_C_snRNP, cd01514/C terminal domain:eEF2_C_snRNP: This family includes C-terminal portion of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart Snu114p. This domain is homologous to domain II of the eukaryotic translational elongation factor EF-2. Yeast Snu114p is essential for cell viability and for splicing in vivo. U5-116 kD binds GTP. Experiments suggest that GTP binding and probably GTP hydrolysis is important for the function of the U5-116 kD/Snu114p. In complex with GTP, EF-2 promotes the translocation step of translation. During translocation the peptidyl-tRNA is moved from the A site to the P site, the uncharged tRNA from the P site to the E-site and, the mRNA is shifted one codon relative to the ribosome.
Probab=32.58 E-value=24 Score=17.35 Aligned_cols=16 Identities=31% Similarity=0.900 Sum_probs=11.9
Q ss_pred CCceeeeeEeCCCccc
Q 047075 67 GYGSVYKGKLLDGRNV 82 (83)
Q Consensus 67 ~~g~vYk~~l~~g~~v 82 (83)
+++.||.|.+..|+.+
T Consensus 19 a~~RV~sGtl~~g~~v 34 (94)
T cd04090 19 AFGRIYSGTIKKGQKV 34 (94)
T ss_pred EEEEEeeCeEcCCCEE
Confidence 5688899988766643
No 376
>PHA03286 envelope glycoprotein E; Provisional
Probab=32.12 E-value=54 Score=21.68 Aligned_cols=12 Identities=50% Similarity=0.703 Sum_probs=7.0
Q ss_pred ceeeeeEeCCCc
Q 047075 69 GSVYKGKLLDGR 80 (83)
Q Consensus 69 g~vYk~~l~~g~ 80 (83)
|.-|.+.|.+|.
T Consensus 471 ~~~~~~~~~~~~ 482 (492)
T PHA03286 471 GSRYHAWLADGG 482 (492)
T ss_pred cchhhhhhhcCC
Confidence 345777776554
No 377
>cd04092 mtEFG2_II_like mtEFG2_C: C-terminus of mitochondrial Elongation factor G2 (mtEFG2)-like proteins found in eukaryotes. Eukaryotic cells harbor 2 protein synthesis systems: one localized in the cytoplasm, the other in the mitochondria. Most factors regulating mitochondrial protein synthesis are encoded by nuclear genes, translated in the cytoplasm, and then transported to the mitochondria. The eukaryotic system of elongation factor (EF) components is more complex than that in prokaryotes, with both cytoplasmic and mitochondrial elongation factors and multiple isoforms being expressed in certain species. Eukaryotic EF-2 operates in the cytosolic protein synthesis machinery of eukaryotes, EF-Gs in protein synthesis in bacteria. Eukaryotic mtEFG1 proteins show significant homology to bacterial EF-Gs. No clear phenotype has been found for mutants in the yeast homologue of mtEFG2, MEF2. There are two forms of mtEFG present in mammals (designated mtEFG1s and mtEFG2s) mtEFG1s are n
Probab=32.02 E-value=22 Score=16.90 Aligned_cols=20 Identities=30% Similarity=0.464 Sum_probs=13.9
Q ss_pred hccCCCceeeeeEeCCCccc
Q 047075 63 LGQGGYGSVYKGKLLDGRNV 82 (83)
Q Consensus 63 ig~g~~g~vYk~~l~~g~~v 82 (83)
.|+=+++.+|.|.+..|+.+
T Consensus 14 ~g~i~~~Ri~sGtl~~g~~v 33 (83)
T cd04092 14 RGPLTFVRVYSGTLKRGSAL 33 (83)
T ss_pred CCeEEEEEEecCEECCCCEE
Confidence 45556788888888776543
No 378
>PF02158 Neuregulin: Neuregulin family; InterPro: IPR002154 Neuregulins are a sub-family of EGF-like molecules that have been shown to play multiple essential roles in vertebrate embryogenesis including: cardiac development, Schwann cell and oligodendrocyte differentiation, some aspects of neuronal development, as well as the formation of neuromuscular synapses [, ]. Included in the family are heregulin; neu differentiation factor; acetylcholine receptor synthesis stimulator; glial growth factor; and sensory and motor-neuron derived factor []. Multiple family members are generated by alternate splicing or by use of several cell type-specific transcription initiation sites. In general, they bind to and activate the erbB family of receptor tyrosine kinases (erbB2 (HER2), erbB3 (HER3), and erbB4 (HER4)), functioning both as heterodimers and homodimers. The transmembrane forms of neuregulin 1 (NRG1) are present within synaptic vesicles, including those containing glutamate []. After exocytosis, NRG1 is in the presynaptic membrane, where the ectodomain of NRG1 may be cleaved off. The ectodomain then migrates across the synaptic cleft and binds to and activates a member of the EGF-receptor family on the postsynaptic membrane. This has been shown to increase the expression of certain glutamate-receptor subunits. NRG1 appears to signal for glutamate-receptor subunit expression, localisation, and /or phosphorylation facilitating subsequent glutamate transmission. The NRG1 gene has been identified as a potential gene determining susceptibility to schizophrenia by a combination of genetic linkage and association approaches []. ; GO: 0005102 receptor binding, 0009790 embryo development; PDB: 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=31.12 E-value=16 Score=23.33 Aligned_cols=6 Identities=17% Similarity=0.778 Sum_probs=0.0
Q ss_pred hHHHHH
Q 047075 5 AIGILI 10 (83)
Q Consensus 5 ~~~~~~ 10 (83)
.+++++
T Consensus 16 cvaLlV 21 (404)
T PF02158_consen 16 CVALLV 21 (404)
T ss_dssp ------
T ss_pred hHHHHH
Confidence 333333
No 379
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=30.79 E-value=31 Score=21.10 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=12.8
Q ss_pred hhhccCCCceeeeeE
Q 047075 61 YKLGQGGYGSVYKGK 75 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~ 75 (83)
..+|+|+|..||.++
T Consensus 27 ~~LgeGGfsfv~LV~ 41 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVK 41 (302)
T ss_pred eeecCCCceeeeeec
Confidence 578999999999765
No 380
>PF13511 DUF4124: Domain of unknown function (DUF4124)
Probab=30.65 E-value=42 Score=14.83 Aligned_cols=13 Identities=31% Similarity=0.187 Sum_probs=9.9
Q ss_pred ceeeeeEeCCCcc
Q 047075 69 GSVYKGKLLDGRN 81 (83)
Q Consensus 69 g~vYk~~l~~g~~ 81 (83)
+.+||.+-++|.+
T Consensus 13 a~vYk~~D~~G~v 25 (60)
T PF13511_consen 13 AEVYKWVDENGVV 25 (60)
T ss_pred ccEEEEECCCCCE
Confidence 5789988777764
No 381
>KOG4550 consensus Predicted membrane protein [Function unknown]
Probab=30.53 E-value=28 Score=22.89 Aligned_cols=9 Identities=0% Similarity=-0.038 Sum_probs=4.3
Q ss_pred HHHHHhhcC
Q 047075 17 RRKFSSYNS 25 (83)
Q Consensus 17 ~~~~~~~~~ 25 (83)
+.+|+.|+.
T Consensus 581 ~Lh~~EKke 589 (606)
T KOG4550|consen 581 ILHWQEKKE 589 (606)
T ss_pred heehhhhhh
Confidence 345555543
No 382
>cd03700 eEF2_snRNP_like_II EF2_snRNP_like_II: this subfamily represents domain II of elongation factor (EF) EF-2 found eukaryotes and archaea and, the C-terminal portion of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart Snu114p. During the process of peptide synthesis and tRNA site changes, the ribosome is moved along the mRNA a distance equal to one codon with the addition of each amino acid. This translocation step is catalyzed by EF-2_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Yeast Snu114p is essential for cell viability and for splicing in vivo. U5-116 kD binds GTP. Experiments suggest that GTP binding and probably GTP hydrolysis is important for the function of the U5-116 kD/Snu114p.
Probab=30.37 E-value=26 Score=17.13 Aligned_cols=18 Identities=28% Similarity=0.682 Sum_probs=12.8
Q ss_pred ccCCCceeeeeEeCCCcc
Q 047075 64 GQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 64 g~g~~g~vYk~~l~~g~~ 81 (83)
|+=+++.||.|.|..|..
T Consensus 16 g~la~~RV~sGtl~~g~~ 33 (93)
T cd03700 16 GFIAFGRVFSGTIRKGQK 33 (93)
T ss_pred EEEEEEEEeeCeEeCCCE
Confidence 445668889998876654
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=29.90 E-value=52 Score=21.31 Aligned_cols=16 Identities=31% Similarity=0.391 Sum_probs=13.9
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
..+|+|+||.|.+..-
T Consensus 95 ~~lGeGtFGkV~ec~D 110 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWD 110 (415)
T ss_pred hhhcCCcccceEEEee
Confidence 6889999999998765
No 384
>PF12451 VPS11_C: Vacuolar protein sorting protein 11 C terminal; InterPro: IPR024763 Vps 11 is one of the evolutionarily conserved class C vacuolar protein sorting genes (c-vps: vps11, vps16, vps18, and vps33), whose products physically associate to form the c-vps protein complex required for vesicle docking and fusion. This entry represents the C-terminal domain of vps11.
Probab=29.41 E-value=38 Score=14.76 Aligned_cols=19 Identities=16% Similarity=0.382 Sum_probs=12.3
Q ss_pred HHHHHHhhhHh---hhhccCCC
Q 047075 50 ADIKKMTNSFK---YKLGQGGY 68 (83)
Q Consensus 50 ~~l~~~t~~f~---~~ig~g~~ 68 (83)
.+|..+.+.|+ +-+|+|.+
T Consensus 26 ~~L~~s~D~F~vIaeyfGrGv~ 47 (49)
T PF12451_consen 26 KQLEESEDRFSVIAEYFGRGVM 47 (49)
T ss_pred HHHHhCCCCchhHHHHHccccc
Confidence 45566666776 66777754
No 385
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=29.23 E-value=72 Score=18.81 Aligned_cols=10 Identities=10% Similarity=0.328 Sum_probs=5.9
Q ss_pred eHHHHHHHhh
Q 047075 48 GYADIKKMTN 57 (83)
Q Consensus 48 ~~~~l~~~t~ 57 (83)
.+.++.+|..
T Consensus 151 DW~Em~~Ais 160 (217)
T PF07423_consen 151 DWNEMLKAIS 160 (217)
T ss_pred CHHHHHHHHH
Confidence 5666666653
No 386
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=28.97 E-value=52 Score=20.73 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=13.2
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
.-+|.|+||.|-....
T Consensus 50 ~tlGtGSFGrV~LVr~ 65 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVRE 65 (355)
T ss_pred eeeccCccceEEEEEE
Confidence 4689999999987665
No 387
>cd03699 lepA_II lepA_II: This subfamily represents the domain II of LepA, a GTP-binding protein localized in the cytoplasmic membrane. The N-terminal domain of LepA shares regions of homology to translation factors. In terms of interaction with the ribosome, EF-G, EF-Tu and IF2 have all been demonstrated to interact at overlapping sites on the ribosome. Chemical protection studies demonstrate that they all include the universally conserved alpha-sarcin loop as part of their binding site. These data indicate that LepA may bind to this location on the ribosome as well. LepA has never been observed in archaea, and eukaryl LepA is organellar. LepA is therefore a true bacterial GTPase, found only in the bacterial lineage.
Probab=28.89 E-value=25 Score=16.89 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=13.6
Q ss_pred hccCCCceeeeeEeCCCcc
Q 047075 63 LGQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 63 ig~g~~g~vYk~~l~~g~~ 81 (83)
.|+=.++.+|.|.+..|+.
T Consensus 14 ~G~i~~~Rv~sG~l~~~~~ 32 (86)
T cd03699 14 RGVIALVRVFDGTLKKGDK 32 (86)
T ss_pred CCEEEEEEEEcCEEcCCCE
Confidence 4555778888888876654
No 388
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=27.09 E-value=46 Score=18.97 Aligned_cols=15 Identities=47% Similarity=0.948 Sum_probs=12.3
Q ss_pred hhccCCCceeeeeEe
Q 047075 62 KLGQGGYGSVYKGKL 76 (83)
Q Consensus 62 ~ig~g~~g~vYk~~l 76 (83)
.+|.|.|+.||++..
T Consensus 7 ~l~~g~~~~v~~~~~ 21 (384)
T COG0515 7 KLGEGSFGEVYLARD 21 (384)
T ss_pred eecCCCCeEEEEEEe
Confidence 567899999998864
No 389
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=26.62 E-value=1e+02 Score=19.45 Aligned_cols=17 Identities=24% Similarity=0.544 Sum_probs=14.4
Q ss_pred hhhccCCCceeeeeEeC
Q 047075 61 YKLGQGGYGSVYKGKLL 77 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~ 77 (83)
..+|+|.||.+..++-.
T Consensus 30 k~lgeG~FgkIlL~eHr 46 (378)
T KOG1345|consen 30 KQLGEGRFGKILLAEHR 46 (378)
T ss_pred HHhcccceeeEEeeecc
Confidence 57899999999988763
No 390
>PF15013 CCSMST1: CCSMST1 family
Probab=26.28 E-value=73 Score=15.52 Aligned_cols=6 Identities=0% Similarity=0.057 Sum_probs=2.2
Q ss_pred HHHHHH
Q 047075 11 FIAFYF 16 (83)
Q Consensus 11 ~~~~~~ 16 (83)
++++++
T Consensus 41 ~~fliy 46 (77)
T PF15013_consen 41 AAFLIY 46 (77)
T ss_pred HHHHHH
Confidence 333333
No 391
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=26.12 E-value=47 Score=19.62 Aligned_cols=16 Identities=6% Similarity=-0.334 Sum_probs=13.7
Q ss_pred hhhccCCCceeeeeEe
Q 047075 61 YKLGQGGYGSVYKGKL 76 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l 76 (83)
+++|.|+||.||....
T Consensus 37 ~~l~~~~f~~v~l~~~ 52 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT 52 (232)
T ss_pred EEecCCCceEEEEEec
Confidence 6889999999998655
No 392
>cd03689 RF3_II RF3_II: this subfamily represents the domain II of bacterial Release Factor 3 (RF3). Termination of protein synthesis by the ribosome requires two release factor (RF) classes. The class II RF3 is a GTPase that removes class I RFs (RF1 or RF2) from the ribosome after release of the nascent polypeptide. RF3 in the GDP state binds to the ribosomal class I RF complex, followed by an exchange of GDP for GTP and release of the class I RF. Sequence comparison of class II release factors with elongation factors shows that prokaryotic RF3 is more similar to EF-G whereas eukaryotic eRF3 is more similar to eEF1A, implying that their precise function may differ.
Probab=25.94 E-value=29 Score=16.77 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=12.6
Q ss_pred ccCCCceeeeeEeCCCcc
Q 047075 64 GQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 64 g~g~~g~vYk~~l~~g~~ 81 (83)
|+=.++.+|.|.+..|..
T Consensus 16 Gkla~~Rv~sG~l~~g~~ 33 (85)
T cd03689 16 DRIAFVRVCSGKFERGMK 33 (85)
T ss_pred cEEEEEEEECCEEcCCCE
Confidence 555677888888866654
No 393
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=25.87 E-value=54 Score=22.14 Aligned_cols=22 Identities=36% Similarity=0.585 Sum_probs=16.3
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
..||+|..|.||.+.- ..++.|
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~V 301 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEV 301 (550)
T ss_pred hhhccccccceeeeeeccCCceE
Confidence 5899999999998753 344443
No 394
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=24.80 E-value=60 Score=21.87 Aligned_cols=22 Identities=32% Similarity=0.590 Sum_probs=16.2
Q ss_pred hhhccCCCceeeeeEe-CCCccc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNV 82 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~v 82 (83)
..||+|.||.|-+|.- .+++.+
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~ 125 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLY 125 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEE
Confidence 6789999999988764 244444
No 395
>PRK15449 ferredoxin-like protein FixX; Provisional
Probab=24.30 E-value=48 Score=16.78 Aligned_cols=9 Identities=22% Similarity=0.874 Sum_probs=6.9
Q ss_pred cCCCceeee
Q 047075 65 QGGYGSVYK 73 (83)
Q Consensus 65 ~g~~g~vYk 73 (83)
+|+||..||
T Consensus 85 rgg~GV~yr 93 (95)
T PRK15449 85 RGTFGVEFR 93 (95)
T ss_pred CCCcCEEEe
Confidence 678888776
No 396
>KOG4056 consensus Translocase of outer mitochondrial membrane complex, subunit TOM20 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.77 E-value=1.1e+02 Score=16.87 Aligned_cols=7 Identities=0% Similarity=-0.055 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 047075 11 FIAFYFR 17 (83)
Q Consensus 11 ~~~~~~~ 17 (83)
++++-++
T Consensus 20 ~af~gYc 26 (143)
T KOG4056|consen 20 LAFIGYC 26 (143)
T ss_pred HHHHHHH
Confidence 3333333
No 397
>PF13019 Telomere_Sde2: Telomere stability and silencing
Probab=23.39 E-value=11 Score=21.04 Aligned_cols=14 Identities=36% Similarity=0.828 Sum_probs=10.9
Q ss_pred hhccCCCceeeeeE
Q 047075 62 KLGQGGYGSVYKGK 75 (83)
Q Consensus 62 ~ig~g~~g~vYk~~ 75 (83)
.-|+|+||...++.
T Consensus 86 ~GGKGGFGs~Lr~~ 99 (162)
T PF13019_consen 86 RGGKGGFGSQLRAA 99 (162)
T ss_pred cCCCccHHHHHHHH
Confidence 44899999988763
No 398
>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]
Probab=22.98 E-value=56 Score=19.08 Aligned_cols=12 Identities=42% Similarity=0.789 Sum_probs=9.3
Q ss_pred eeeeEeCCCccc
Q 047075 71 VYKGKLLDGRNV 82 (83)
Q Consensus 71 vYk~~l~~g~~v 82 (83)
=|+|.|.||+++
T Consensus 125 hY~G~l~~G~vF 136 (205)
T COG0545 125 HYTGTLIDGTVF 136 (205)
T ss_pred EEEEecCCCCcc
Confidence 389999988754
No 399
>KOG2849 consensus Placental protein 11 [General function prediction only]
Probab=22.84 E-value=78 Score=20.31 Aligned_cols=21 Identities=29% Similarity=0.564 Sum_probs=17.5
Q ss_pred hhhccCCCceeeeeEeCCCcc
Q 047075 61 YKLGQGGYGSVYKGKLLDGRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~g~~ 81 (83)
..+|+.+|-+|+.|+..+|+.
T Consensus 256 g~~gSSgFEHVF~gEiK~g~v 276 (388)
T KOG2849|consen 256 GPGGSSGFEHVFSGEIKDGEV 276 (388)
T ss_pred CCCCCccceEEEEEeeccCcc
Confidence 467889999999999987764
No 400
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=22.81 E-value=23 Score=25.27 Aligned_cols=20 Identities=45% Similarity=0.891 Sum_probs=15.9
Q ss_pred hhhccCCCceeeeeEe-CCCc
Q 047075 61 YKLGQGGYGSVYKGKL-LDGR 80 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~ 80 (83)
..||.|.+|.|||+.= .+|+
T Consensus 25 evig~Gtygkv~k~k~~~~~~ 45 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQ 45 (953)
T ss_pred EEEeeccceeEEEEeeeecCc
Confidence 6899999999999864 3444
No 401
>KOG4616 consensus Mitochondrial ribosomal protein L55 [Translation, ribosomal structure and biogenesis]
Probab=22.49 E-value=69 Score=16.74 Aligned_cols=38 Identities=16% Similarity=0.364 Sum_probs=20.9
Q ss_pred ceeeHHHHHHHhhhHhhhhccCCCceeeeeEe--CCCccc
Q 047075 45 KRYGYADIKKMTNSFKYKLGQGGYGSVYKGKL--LDGRNV 82 (83)
Q Consensus 45 ~~~~~~~l~~~t~~f~~~ig~g~~g~vYk~~l--~~g~~v 82 (83)
.++++++-.++...---.|.+..+...|...+ |||..+
T Consensus 31 rkisfeernna~raalgki~rrdy~h~y~~kfi~pdgsti 70 (137)
T KOG4616|consen 31 RKISFEERNNAARAALGKIHRRDYCHLYPTKFIQPDGSTI 70 (137)
T ss_pred cccchhhhhhHHHHHHHHHHHHhHHhhcceeEEcCCCCeE
Confidence 44566653333221113556667777886655 788754
No 402
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=21.57 E-value=50 Score=21.92 Aligned_cols=23 Identities=43% Similarity=0.590 Sum_probs=17.1
Q ss_pred hhhccCCCceeeeeEe-CCCcccC
Q 047075 61 YKLGQGGYGSVYKGKL-LDGRNVA 83 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l-~~g~~vA 83 (83)
+-+|+|.||.|-++.= ..|..||
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VA 82 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVA 82 (668)
T ss_pred HHhcCCcccceeehhhccCCcEee
Confidence 5789999999988764 4555554
No 403
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=20.61 E-value=49 Score=20.29 Aligned_cols=21 Identities=24% Similarity=0.616 Sum_probs=16.9
Q ss_pred hhhccCCCceeeeeEeCC-Ccc
Q 047075 61 YKLGQGGYGSVYKGKLLD-GRN 81 (83)
Q Consensus 61 ~~ig~g~~g~vYk~~l~~-g~~ 81 (83)
..||.|+++.||.++-.+ |+.
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~ 39 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEE 39 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEE
T ss_pred cccccCCceEEEEEEEccCCce
Confidence 578999999999998754 544
No 404
>PF12297 EVC2_like: Ellis van Creveld protein 2 like protein; InterPro: IPR022076 This family of proteins is found in eukaryotes. Proteins in this family are typically between 571 and 1310 amino acids in length. There are two conserved sequence motifs: LPA and ELH. EVC2 is implicated in Ellis van Creveld chondrodysplastic dwarfism in humans. Mutations in this protein can give rise to this congenital condition. LIMBIN is a protein which shares around 80% sequence homology with EVC2 and it is implicated in a similar condition in bovine chondrodysplastic dwarfism.
Probab=20.27 E-value=1.3e+02 Score=19.71 Aligned_cols=8 Identities=13% Similarity=0.455 Sum_probs=3.3
Q ss_pred hhhHHHHH
Q 047075 3 AIAIGILI 10 (83)
Q Consensus 3 ~~~~~~~~ 10 (83)
++++++++
T Consensus 69 gFfvaflv 76 (429)
T PF12297_consen 69 GFFVAFLV 76 (429)
T ss_pred HHHHHHHH
Confidence 34444433
No 405
>PRK14780 lipoprotein signal peptidase; Provisional
Probab=20.16 E-value=1.9e+02 Score=17.70 Aligned_cols=12 Identities=50% Similarity=1.093 Sum_probs=6.3
Q ss_pred CCCceeeHHHHH
Q 047075 42 PSPKRYGYADIK 53 (83)
Q Consensus 42 ~~~~~~~~~~l~ 53 (83)
+..+++.+++++
T Consensus 250 ~~~~~~~~~~~~ 261 (263)
T PRK14780 250 PSNKPFGYDDLQ 261 (263)
T ss_pred cccCCCchhhhc
Confidence 344555665554
Done!