BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047079
(296 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 257 bits (657), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/291 (47%), Positives = 181/291 (62%), Gaps = 20/291 (6%)
Query: 3 STTYPSSSYP-PHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQ- 60
ST PS P P ++Y +PP+T+ILTV LLVFFF+GFF++YFC+CF++ +V W+L
Sbjct: 2 STIIPSPLAPQPPQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHG 61
Query: 61 --SPSGNAAGTSDSP-ANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDN 117
+ S N ++P NPGL +I +FP F YS+VKD R +KYGLECAICL EF+ D+
Sbjct: 62 GDTVSDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDH 121
Query: 118 ILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSN 177
+LRLLT CYHVFHQECIDLW ESH+TCPVCR DLD P P +++ +
Sbjct: 122 VLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPENTKP------TVDEMIIDV 175
Query: 178 VSTLEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEK----IEKFSRSHSTGHSMHT 233
+ D +ED+ R Q+ Q +K EKFSRSHSTGHS+
Sbjct: 176 IQETSDD-----EEDDHHRQQTTTQIDTWPSSGQTSSIKKEQNLPEKFSRSHSTGHSIVR 230
Query: 234 TKNELEDRHTLRLPENVKLKILRGHNWTGSCITFGEFGSPVTRNNVGFGDV 284
K E ED++TLRLPE+VK+K+ RGH+ T SC+TF E ++ FG+V
Sbjct: 231 NKPEEEDKYTLRLPEHVKIKVTRGHSQTESCVTFAELIRNRGYDHRRFGEV 281
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 237 bits (604), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/299 (46%), Positives = 180/299 (60%), Gaps = 45/299 (15%)
Query: 2 SSTTYPSSSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQ---- 57
+TT P YPP ++Y+ PP+ IILTV LLV FF+GFF++YFC+CF + W
Sbjct: 9 QNTTVP---YPP--QHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYH 63
Query: 58 --LRQSPSGNAAGTSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFED 115
L ++ P NPGL P +IQ++P F +S+VKD R KYGLECAICL EFE+
Sbjct: 64 NGLPENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEE 123
Query: 116 DNI-LRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLD--LPQNSLEKSPLLFRSNSMNN 172
++I LRLLT CYHVFHQECID WLES+KTCPVCR +LD P+N E + + N+ N
Sbjct: 124 EHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAPENIKELIIEVIQENAHEN 183
Query: 173 ITGSNVSTLEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIE----KFSRSHSTG 228
D+E + E +++ NER KIE KFSRS +TG
Sbjct: 184 ------------------RDQEQTSTSNEVMLSRQSSGNNER--KIETLPDKFSRSKTTG 223
Query: 229 HSMHTTKNELEDRHTLRLPENVKLKILRGH--NWTGSCITFGEFGSPVTRNNVG-FGDV 284
HS+ K E EDR+TLRLP++VK+K+ R H N T SCI+FGE + RN G FG+V
Sbjct: 224 HSIVRNKPEEEDRYTLRLPDHVKIKVTRRHNNNQTESCISFGE----LVRNREGRFGEV 278
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 141/272 (51%), Gaps = 42/272 (15%)
Query: 1 MSSTTYPSSSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQ 60
MSSTT S S P+T++LT LL F GFFS++ + + + TW L++
Sbjct: 1 MSSTTSIDSIPATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQR 60
Query: 61 SPSGNAAGTSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILR 120
+P G+ + P N GL P +I++FP F YS+ ++ +G ECAICL+EF D++ +R
Sbjct: 61 TPYGDLIHVATPPENTGLDPFIIRSFPVFHYSSAT---KKNHGTECAICLSEFSDEDTVR 117
Query: 121 LLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVST 180
L+TVC H FH CIDLW E HKTCPVCR +LD P + S + + + T
Sbjct: 118 LITVCRHPFHSNCIDLWFELHKTCPVCRCELD---------PGMIGSGRLESFHNTVTIT 168
Query: 181 LEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIE--KFSRSHSTGHSMHTTKNEL 238
++D I DEE NP ++R + +FSRSHSTGH M T +
Sbjct: 169 IQD-----INHDEE----------NPPTAGSSKRLIEASAWRFSRSHSTGHFMVKTTD-- 211
Query: 239 EDRHTLRLPENVKLKILRGHNWTGSCITFGEF 270
NVK K R H TGSC++F E
Sbjct: 212 ---------ANVKSK--RRHYQTGSCVSFDEL 232
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 139/278 (50%), Gaps = 25/278 (8%)
Query: 2 SSTTYPSSSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQS 61
+S + P + P+ SP + +I+ + + FF+GFFS+YF C S
Sbjct: 28 ASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGV-----S 82
Query: 62 PSGNAAGTSD-SPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILR 120
P+G A + + A GL S+++ FP F YS VK + K LECAICL EFEDD LR
Sbjct: 83 PAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLR 142
Query: 121 LLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVST 180
LL C HVFH CID WLE+H TCPVCR++L + + S+ G
Sbjct: 143 LLPKCDHVFHPHCIDAWLEAHVTCPVCRANL---------AEQVAEGESVE--PGGTEPD 191
Query: 181 LEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIE----KFSRSHSTGHSMHTTKN 236
LE + + + EQ+V + + ++ KFSRSH+TGHS+
Sbjct: 192 LE-LQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKRVKFSRSHTTGHSV-VQPG 249
Query: 237 ELEDRHTLRLPENVKLKILRGH--NWTGSCITFGEFGS 272
E +R TLRLPE+V+ +I++ N T S + GS
Sbjct: 250 ECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGS 287
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 36/251 (14%)
Query: 9 SSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAG 68
S PP + +P T + V + +FF G SVY C N ++ + ++ + +
Sbjct: 32 SPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRANDG-- 89
Query: 69 TSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHV 128
S GL +++++FP FAYS+VK+ + LECAICL E ED +RLL +C H+
Sbjct: 90 ---SSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHL 146
Query: 129 FHQECIDLWLESHKTCPVCRSDL----DLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDA 184
FH +CID WL SH TCPVCRS+L + P + + PL +M + ++ T+E A
Sbjct: 147 FHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDEDDGVPLA----AMRDHVVVDIETVEVA 202
Query: 185 ISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIEKFSRSHSTGHSMHTTKNELEDRHTL 244
S + E G KF RS+STGHSM + E R TL
Sbjct: 203 KSHHRRLSSEISG----------------------KFPRSNSTGHSMDRFSDGTE-RFTL 239
Query: 245 RLPENVKLKIL 255
RLP++VK++++
Sbjct: 240 RLPDDVKMRLM 250
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 20/240 (8%)
Query: 21 PPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDSPANPGLHP 80
P + I++ V + VFFF+GFFSVY RC +E ++ + +GN T+ A GL
Sbjct: 61 PTMAILMIVLVSVFFFLGFFSVYIRRC-LERVMGMDYGNPNDAGNWLATNRQQAR-GLDA 118
Query: 81 SLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLES 140
S+I+ FP F YSTVK R K LEC++CL EFEDD LRL+ C HVFH CID WL S
Sbjct: 119 SIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRS 178
Query: 141 HKTCPVCRSDL-DLPQNSLE--KSPLLFRSNSMNNITGSNVSTLEDAISIFIKEDEEARG 197
H TCP+CR+DL +P S+ + P L ++ G + +L + I
Sbjct: 179 HTTCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNGDRIRSLGSPDARLI-------- 230
Query: 198 DNGEQVVNPNIIKQ--NERYEKIEKFSRSHSTGHSMHTTKNELEDRHTLRLPENVKLKIL 255
++ N ++ ++ + + F+ S TG +E DR TLRLP+++ K++
Sbjct: 231 ESVALTCNQSMPRRSMSTGWNLAGMFTNSDRTGQ-----HSENLDRFTLRLPQDIHNKLV 285
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 14/249 (5%)
Query: 22 PITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSD--SPANPGLH 79
P+ +++TV LV FF+ F S+ FCR + R + + + GL
Sbjct: 50 PVVVVITVLFLVIFFMVFGSI-FCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLD 108
Query: 80 PSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLE 139
I+ FP F YS VK R K G+ECA+CL EFEDD LRL+ C HVFH +C+D+WL
Sbjct: 109 AEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLS 168
Query: 140 SHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDAISIFIKEDEEARGDN 199
H TCP+CR+DL L Q + + S + +S+ D + E +A +
Sbjct: 169 EHSTCPLCRADLVLNQQGDDDDS----TESYSGTDPGTISSSTDPERGMVLESSDAHLLD 224
Query: 200 GEQVVNPNIIKQNERYE----KIEK--FSRSHSTGHSMHTTKNELEDRHTLRLPENVKLK 253
N NI +++ +I F RSHSTGHS+ L DR TLRLP++V+ +
Sbjct: 225 AVTWSNSNITPRSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNL-DRFTLRLPDDVRRQ 283
Query: 254 ILRGHNWTG 262
+++ G
Sbjct: 284 LMKTSRTMG 292
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 126/256 (49%), Gaps = 45/256 (17%)
Query: 7 PSSSYPPHAENYA-SPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGN 65
P + P+A + + SP + +++ V + FF+GFF+VY C +P+G
Sbjct: 28 PDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHC-----TGAVDGSVTPAGG 82
Query: 66 AAG-TSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTV 124
A +++ GL I+ FP F YS VK + K LECAICL EFEDD LRLL
Sbjct: 83 ARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPK 142
Query: 125 CYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDA 184
C HVFH CI WL+ H TCPVCR++L E++P
Sbjct: 143 CDHVFHPHCIGAWLQGHVTCPVCRTNL------AEQTP---------------------E 175
Query: 185 ISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIEKFSRSHSTGHSMHTTKNELEDRHTL 244
+ ++ D EA+ +Q P + + R KF RSH+TGHS+ E DR TL
Sbjct: 176 PEVVVETDLEAQ----QQSAVPVPVVELPRV----KFPRSHTTGHSV-VLPGESTDRFTL 226
Query: 245 RLPENVKLKILRGHNW 260
R+PE ++ KI+ NW
Sbjct: 227 RVPEELRKKIM--ANW 240
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 136/282 (48%), Gaps = 26/282 (9%)
Query: 8 SSSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAA 67
SS + SP II+ V + VFF +G SVY RC + SG
Sbjct: 24 SSEFDDEGRTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMD-------SGGGP 76
Query: 68 GT---SDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTV 124
G PGL S+I+ FP F YSTVK R K LEC +CL EFEDD LRL+
Sbjct: 77 GNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQ 136
Query: 125 CYHVFHQECIDLWLESHKTCPVCRSDL-DLPQNSLEKS-PLLFRSNSMNNITGSNVSTLE 182
C HVFH CID WL S TCP+CR++L +P S+ P L R N++ + ++
Sbjct: 137 CCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLR----TPID 192
Query: 183 DAISIFIKEDEEARGDNGEQVVNPNIIKQNER--YEKIEKFSRSHSTGHSMHTTKNELED 240
D + +E D+ N ++ +++ ++ E +S + S G E D
Sbjct: 193 DNRKRVLTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQ-----PEENLD 247
Query: 241 RHTLRLPENVKLKILRGHNWTGSCITFGEFGSPVTRNNV-GF 281
R+TLRLP+ + +++ ++ G + G+ P R++V GF
Sbjct: 248 RYTLRLPQEIHDQLV--NSSLGKQGSKGQLALPQERSSVRGF 287
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 13 PHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDS 72
P E AS +++T+ L F VG SV F R + + + +
Sbjct: 4 PGTEIKASDLTLLVITIILFAIFIVGLASVCF-RWTSRQFYSQESINPFTDSDVESRTSI 62
Query: 73 PANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQE 132
A GL ++I +FP F YS VK+ R G+ECA+C+ EFED LRL+ C HVFH +
Sbjct: 63 TAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHAD 122
Query: 133 CIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDAISIFIKED 192
C+ +WL H TCP+CR DL L E+S L N ++ S S L D ++ + +
Sbjct: 123 CVSVWLSDHSTCPLCRVDLCLQPG--ERSYL----NPEPDLVESTNSHLFDGVT-WTNRN 175
Query: 193 EEARGDNGEQVVNPNIIKQNERYEKIEKFSRSHSTGHSMHTTKNELEDRHTLRLPENVKL 252
+R + R +I SRSHSTGHS+ + L DR TLRLPE V+
Sbjct: 176 RPSRSWSTR--------LSQCRVSQI-LISRSHSTGHSVVQPLDNL-DRFTLRLPEEVRR 225
Query: 253 KILR 256
++ +
Sbjct: 226 QLTK 229
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 24 TIILTVTLLVFFFVGFFSVYF-CRCFMENIVNTWQLRQSPSGNAAGTS--DSPANPGLHP 80
+II V L +F +G S C + E I AAG S A GL
Sbjct: 50 SIIAIVVLAIFISLGMVSCCLHCIFYREEI------------GAAGQDVLHSRARRGLEK 97
Query: 81 SLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLES 140
+I++FP F YS VK + K G+ECAICL+EFED LR + C H FH CID+WL S
Sbjct: 98 EVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSS 157
Query: 141 HKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDAISIFIKEDEEARGDNG 200
TCPVCR++L L E P L +M+ TG V L + S+ G++
Sbjct: 158 WSTCPVCRANLSLKPG--ESYPYL----NMDVETG-GVQKLPNERSL--------TGNSV 202
Query: 201 EQVVNPNIIKQNERYEKIEKFSRSHSTGHSMHTTKNELEDRHTLRLPENVKLKIL 255
+ + R +I RSHSTGHS+ E DR TL+LPE V+ +++
Sbjct: 203 TTRSRSTGLLSSWRMAEI-FVPRSHSTGHSLVQQLGENLDRFTLQLPEEVQRQLV 256
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 125/271 (46%), Gaps = 31/271 (11%)
Query: 1 MSSTTYPSSSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQ 60
+S P ++ PP Y + + V + + F FS+ C C NT
Sbjct: 24 VSGQHQPRTTAPP----YIAQRPNQVPAVIIAMLMFTLLFSMLAC-CVCYKYTNT----- 73
Query: 61 SPSGNAAGTSDSP---------ANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLA 111
SP G ++ T + + GL +I +FP+F YS VK + K G+ECAICL
Sbjct: 74 SPHGTSSDTEEGGHGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLN 133
Query: 112 EFEDDNILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLF------ 165
EFED+ LRL+ C H FH CID+WL S TCPVCR+ L S + S F
Sbjct: 134 EFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDN 193
Query: 166 RSNSMNNITGSNVSTLEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIEK--FSR 223
+ + N+T S LE + D + +N P +I + F R
Sbjct: 194 QDMDLENVTARR-SVLESPDVRLL--DRLSWSNNTGANTPPRSRSTGLSNWRITELLFPR 250
Query: 224 SHSTGHSMHTTKNELEDRHTLRLPENVKLKI 254
SHSTGHS+ + E DR TL+LPE V+ ++
Sbjct: 251 SHSTGHSL-VPRVENLDRFTLQLPEEVRRQL 280
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 125/236 (52%), Gaps = 14/236 (5%)
Query: 1 MSSTTYPSSSYPPHAENYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTW---Q 57
MS +T + ++ P S P+TI+LT +LL F GFFS +FC C ++ W +
Sbjct: 53 MSISTTETDNFKP-VHTLVSSPVTIVLTGSLLFIIFTGFFSFFFCGCLFRKLMRIWNNHR 111
Query: 58 LRQSPSGNAAGTSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDN 117
R PS N S+ P N GL +I++FP + YS VKD +C+ICL EF DD+
Sbjct: 112 NRNRPS-NLIQPSNPPENLGLDSKIIESFPEYPYS-VKDHGTD----QCSICLTEFMDDD 165
Query: 118 ILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSN 177
+RL++ C H FH CIDLW E HKTCPVCR +LD+ + + PL + +
Sbjct: 166 TIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDRTSLEKPLEVPEIDLVRSEIHD 225
Query: 178 VSTLEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIE--KFSRSHSTGHSM 231
D ++I + E+ + + + + I+ ER K +F RSHSTGHS+
Sbjct: 226 EPLPRDTVTIIVHEEHPSTTIGSLE--HTDEIESYERRMKASNLRFWRSHSTGHSI 279
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 97/190 (51%), Gaps = 26/190 (13%)
Query: 77 GLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDL 136
G+ +I++FPAF YS VK F+ G+ECAICL EFED+ LR + C H FH CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 137 WLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDAISIFIKEDEEAR 196
WL S TCPVCR++L L KS F SM+ TG+ ++E + R
Sbjct: 151 WLSSRSTCPVCRANLSL------KSGDSFPHPSMDVETGNAQRG--------VQESPDER 196
Query: 197 GDNGEQVV---NPNIIKQNERYEKI-------EKF-SRSHSTGHSMHTTKNELEDRHTLR 245
G V N N R + E F RSHSTGHS+ + DR TL+
Sbjct: 197 SLTGSSVTCNNNANYTTPRSRSTGLLSSWHVPELFLPRSHSTGHSLVQPCQNI-DRFTLQ 255
Query: 246 LPENVKLKIL 255
LPE V+ +++
Sbjct: 256 LPEEVQRQLV 265
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 21/240 (8%)
Query: 6 YPSSSYPPHAENYAS----PPITIILTVTLLVFFFVGFFSVYFCRCFMENI-----VNTW 56
Y S+ PP YA+ P I+T + F + F + + +CF ++ +
Sbjct: 19 YVSAQSPPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGE 78
Query: 57 QLRQSPSGNAAGTSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDD 116
++R S + GL I++ P F +S +K K GLEC++CL++FED
Sbjct: 79 RIRHDRLWQGLFNRSSRFS-GLDKKAIESLPFFRFSALKGL---KQGLECSVCLSKFEDV 134
Query: 117 NILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGS 176
ILRLL C H FH CID WLE H TCP+CR+ +++ + S L S S+ + S
Sbjct: 135 EILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIED---DLSVLGNSSTSLRILNQS 191
Query: 177 NVSTLEDAISIFIKEDE-----EARGDNGEQVVNPNIIKQNERYEKIEKFSRSHSTGHSM 231
+ + I+I+ +E +R + +++ +++ + E E I++ H H +
Sbjct: 192 ETREEDSRLEIYIEREEGTNDGSSRFSSFRKILKKSLLLEREGNENIDEKKLMHKFNHRI 251
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 21 PPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDSPANPGLHP 80
P T+I + L +F + + + + F R + S A GL
Sbjct: 47 PTETVIAIIVLAIFISLSMVACFLHKTFY---------RAEVEAASQEVFHSRARRGLEK 97
Query: 81 SLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLES 140
L+++FP F YS VK + K G+ECAICL+EF D LR + C H FH CID+WL S
Sbjct: 98 ELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSS 157
Query: 141 HKTCPVCRSDLDL 153
TCP CR++L L
Sbjct: 158 QSTCPACRANLSL 170
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 22 PITIILTVTLL-VFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGN--AAGTSDSPANPGL 78
P T+++ V L+ F + FSV RC R + S + S A+ GL
Sbjct: 45 PTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASRGL 104
Query: 79 HPSLIQAFPAFAYSTVKDFRRQKYG-LECAICLAEFEDDNILRLLTVCYHVFHQECIDLW 137
+++AFP Y VK K G LECA+CLAEF D + LR+L C HVFH +CID W
Sbjct: 105 DKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPW 164
Query: 138 LESHKTCPVCRSDLDLPQNSL--EKSPLLFRSNSMNNITGSNVSTLEDAISIFIKEDEEA 195
L + TCP+CR++L P SL +S L S ++ F
Sbjct: 165 LAAAVTCPLCRANLTAPPVSLAAAESSDLTAPEEAVQEEESEELDEASLMATFTP----- 219
Query: 196 RGDNGEQVVNPNIIKQNERYEKIEKFSRS-HSTGHSMHTTKNELEDRHTLRLPENVKLKI 254
E V++ +E F R+ + + + DRHTLRLPE+V ++
Sbjct: 220 -----ESVIDFGATHDHE-------FDRAGYPHYRRTQSAMDAAPDRHTLRLPEHVMKEL 267
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 5 TYPSSSYPPHAENYA-----SPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLR 59
+Y S+ PP N P + ++ V ++F VY C ++ + R
Sbjct: 14 SYASAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRR 73
Query: 60 QSPSGNAAG------TSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEF 113
+ G T+ S GL + I++ P F +S +K K GL+C++CL++F
Sbjct: 74 RHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKG---SKQGLDCSVCLSKF 130
Query: 114 EDDNILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNS 157
E ILRLL C H FH CID WLE H TCP+CR + + ++S
Sbjct: 131 ESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDS 174
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 75 NPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECI 134
N G+ S+I++ P F + + K GLECA+CLA FE +LRLL C H FH EC+
Sbjct: 118 NSGIDRSVIESLPVFRFGALSG---HKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECV 174
Query: 135 DLWLESHKTCPVCRSDLDLPQNSL 158
D WL++H TCP+CR +D P++ L
Sbjct: 175 DTWLDAHSTCPLCRYRVD-PEDIL 197
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 24/144 (16%)
Query: 29 VTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDSPANP------------ 76
++ ++ F + SV F C + +++ + L++ S ++ ++S NP
Sbjct: 49 ISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQL 108
Query: 77 ---------GLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYH 127
GL +LI A P F Y K+ + K +CA+CL EF +D+ LRLL C H
Sbjct: 109 QQLFHLHDSGLDQALIDALPVFLY---KEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSH 165
Query: 128 VFHQECIDLWLESHKTCPVCRSDL 151
FH +CID WL S+ TCP+CR L
Sbjct: 166 AFHIDCIDTWLLSNSTCPLCRGTL 189
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 56 WQLRQSPSGNAAGTS----DSPANPG-LHPSLIQAFPAFAYSTVKDFRRQKYGLECAICL 110
+ LR SP S D + PG L+PS+I++ P F +S V + +EC++CL
Sbjct: 25 YLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTAL----FAMECSVCL 80
Query: 111 AEFEDDNILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLD 152
+EF+D+ R++ C H FH CID+W SH +CP+CRS ++
Sbjct: 81 SEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIE 122
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 30/239 (12%)
Query: 11 YPPHAENYASPPITIILTVTLLV--FFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAG 68
+P + + + PI I + +L F V ++ C + ++ ++ R+ S
Sbjct: 31 FPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPL 90
Query: 69 TSDSP--ANPGLHPSLIQAFPAFAYS----TVKDFRRQKYGLECAICLAEFEDDNILRLL 122
SP N GL S I+A P F + + + K EC++CL EF++D LR++
Sbjct: 91 MIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRII 150
Query: 123 TVCYHVFHQECIDLWLESHKTCPVCRSD--------LDL---PQNSLEKSPLLFRSNSMN 171
C HVFH +CID+WL+ + CP+CR+ LDL P + E SP S + N
Sbjct: 151 PNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSP---HSRNRN 207
Query: 172 NITGSNVSTLEDAISIFIKEDEEARGDNGEQVVNPNIIKQNERYEKIEKFSRSHSTGHS 230
G + +D + I E + G+N E V N + + + ER S STG+S
Sbjct: 208 LEPGLVLGGDDDFVVI---ELGASNGNNRESVRNIDFLTEQERVT-----SNEVSTGNS 258
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 32 LVFFF--VGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDSPANP--GLHPSLIQAFP 87
+VF F +GF + Y + + + R + +G+ SP P GL I++FP
Sbjct: 11 IVFAFASIGFIAFYI----INYYIRRCRNRAAAAGDIEEARMSPRRPPRGLDAEAIKSFP 66
Query: 88 AFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLESHKTCPVC 147
+F Y+ + LEC +CL EF+DD LRL+ C HVFH +C+D+WL TCP+C
Sbjct: 67 SFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPIC 126
Query: 148 RSDL 151
R+ +
Sbjct: 127 RAKV 130
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 74 ANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQEC 133
A+ GL P++I++ P F +S K +ECA+CL+EFE+ R+L C H FH +C
Sbjct: 91 ASRGLDPNVIKSLPVFTFSD----ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDC 146
Query: 134 IDLWLESHKTCPVCRS 149
ID+W SH TCP+CRS
Sbjct: 147 IDMWFHSHSTCPLCRS 162
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 81 SLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLES 140
S++ + P F +S+V +CA+CL++FE ++ LRLL +C H FH +CID+WL S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 141 HKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLE 182
++TCP+CRS L ++ L KS + S NN G N LE
Sbjct: 152 NQTCPLCRSPLFASESDLMKSLAVVGS---NNGGGENSFRLE 190
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 75 NPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECI 134
+ G+ SLI P F Y ++ + + +C +CL EFE ++ LRLL C H FH ECI
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPF--DCPVCLCEFETEDKLRLLPKCSHAFHVECI 154
Query: 135 DLWLESHKTCPVCRSDL 151
D WL SH TCP+CRS+L
Sbjct: 155 DTWLLSHSTCPLCRSNL 171
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 75 NPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECI 134
+ G+ S I P F Y ++ + Y +CA+CL EFE ++ LRLL C H FH +CI
Sbjct: 105 DSGVDQSFIDTLPVFHYKSIIGLK--NYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCI 162
Query: 135 DLWLESHKTCPVCR 148
D WL SH TCP+CR
Sbjct: 163 DTWLLSHSTCPLCR 176
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 26 ILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDSPAN-PGLHPSLIQ 84
ILT L++ + S Y R + T L + G + T N GL+ S+I+
Sbjct: 64 ILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIK 123
Query: 85 AFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLESHKTC 144
+ + Y + F G +C++CL+EFE++ LRLL C H FH CID WL+SH C
Sbjct: 124 SITVYKYKSGDGFVD---GSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNC 180
Query: 145 PVCRS 149
P+CR+
Sbjct: 181 PLCRA 185
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 43/233 (18%)
Query: 17 NYASPPITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDSPA-- 74
N SP + ++ + ++FF G + R +++ T R S TSD+
Sbjct: 39 NRISPAVLFVIVILAVLFFISGLLHL-LVRFLIKHPSATASSR-SNRFPEISTSDALQRQ 96
Query: 75 --------NPGLHPSLIQAFPAFAYSTV-------KDFRRQKYGLECAICLAEFEDDNIL 119
+ GL + I A P F Y + + +CA+CL EF + + L
Sbjct: 97 LQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKL 156
Query: 120 RLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVS 179
RLL +C H FH CID WL+S+ TCP+CR L P S+E F
Sbjct: 157 RLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDD------------ 204
Query: 180 TLEDAISIFIKEDEEARGDNGEQV---VNPNIIKQNERYEKIEKFSRSHSTGH 229
I+EDEE +NG Q + ++++ ++ KF R + G+
Sbjct: 205 ---------IREDEEGVTENGSQKTMEIQEIVVEKGVLPVRLGKFKRLDNVGN 248
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 23 ITIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAA-------GTSDSPAN 75
+ + + + L+ FF+GFFSVYF R F ++ +T + P ++ TS +
Sbjct: 50 MALTIFILLVALFFMGFFSVYF-RHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSR 108
Query: 76 P-----GLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFH 130
P GL +++ P + Y+ R + +C ICL++FE+ ++++ C HVFH
Sbjct: 109 PYSFRRGLDSQAVRSLPVYRYTKAAKQRNE----DCVICLSDFEEGETVKVIPHCGHVFH 164
Query: 131 QECIDLWLESHKTCPVCRSD 150
+C+D WL S+ TCP+CRS+
Sbjct: 165 VDCVDTWLSSYVTCPLCRSN 184
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 75 NPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECI 134
+ GL + I A P F Y V Q + +CA+CL EF D + LRLL VC H FH CI
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLEQPF--DCAVCLNEFSDTDKLRLLPVCSHAFHLHCI 235
Query: 135 DLWLESHKTCPVCRSDL 151
D WL S+ TCP+CR L
Sbjct: 236 DTWLLSNSTCPLCRRSL 252
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 77 GLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDL 136
G+ P ++++ P ++T KDF KY LEC +CL+E D + R+L C H FH ECID
Sbjct: 63 GIKPYVLRSIPIVDFNT-KDF---KYVLECVVCLSELADGDKARVLPSCDHWFHVECIDS 118
Query: 137 WLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNN 172
WL+S+ TCP+CR + L Q S + L R S N
Sbjct: 119 WLQSNSTCPICRKRVCLKQ-SRTRPELGGRDKSFNQ 153
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 2 SSTTYPSSSYPPHAENYASPPITIILTVTLLVF-FFVGFFSVYFCRCFMENIVNTWQLRQ 60
+++T P+ + PP + + +IL V L +G +V C W LR+
Sbjct: 12 ANSTSPAEASPPFNSD-----LVLILAVLLCALTCIIGLIAVSRC---------AW-LRR 56
Query: 61 SPSGNAAGTSDSP----ANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDD 116
S N + + P AN GL ++++ P YS D + +ECAICL EF
Sbjct: 57 IASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYS--PDSPPAEKLVECAICLTEFAAG 114
Query: 117 NILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDL 151
+ LR+L C H FH CID WL SH +CP CR L
Sbjct: 115 DELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 77 GLHPSLIQAFPAFAYSTVKDFRRQKYG-------LECAICLAEFEDDNILRLLTVCYHVF 129
GL S+I+ P F YS + G +CA+CL EFE+ + +R L +C+H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 130 HQECIDLWLESHKTCPVCRSDL 151
H ECID WL SH CP+CR+ +
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAI 201
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 73 PANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQE 132
P GL +I + P F D G ECA+CL+ E+ + R+L C HVFH
Sbjct: 71 PPKRGLDSLVIASLPTFVVGIKNDV----AGTECAVCLSLLEEKDNARMLPNCKHVFHVS 126
Query: 133 CIDLWLESHKTCPVCRSDLDLPQNSLEK----------SPLLFRSNSMNNITGSNVSTLE 182
C+D WL + TCPVCR++ + LE +P L + N GS+VS L+
Sbjct: 127 CVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGDFAPPLDFAGVDNKTGGSSVSRLD 186
Query: 183 DAISIFIKEDEEARGDNG 200
I +E R D+
Sbjct: 187 SFRRILTRERSSNRRDHS 204
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 32 LVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGN---AAGTSDSP------ANPGLHPSL 82
LV C + + LR+ +GN + + SP AN GL +
Sbjct: 30 LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKV 89
Query: 83 IQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLWLESHK 142
+Q+ P +S + +K+ ECAICLAEF + LR+L C H FH CID WL SH
Sbjct: 90 LQSLPKLTFSP-ESPESEKFA-ECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHS 147
Query: 143 TCPVCRSDL 151
+CP CR L
Sbjct: 148 SCPSCRQIL 156
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 16 ENYASPPI---TIILTVTLLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAGTSDS 72
E A PP +I + +V C + +V LR+ +G G S S
Sbjct: 9 ETAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAG---GDSPS 65
Query: 73 PANPGLHPSLIQAFP----AFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHV 128
P N GL +Q+ P A ST + ECAICL +F D +R+L +C H
Sbjct: 66 P-NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHS 124
Query: 129 FHQECIDLWLESHKTCPVCRSDL 151
FH ECID WL S +CP CR L
Sbjct: 125 FHVECIDKWLVSRSSCPSCRRIL 147
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 77 GLHPSLIQAFPAFAYSTVKDFRRQKY---GLECAICLAEFEDDNILRLLTVCYHVFHQEC 133
GLH S I + TV F++ + G EC++CL EFE+D LRLL C H FH C
Sbjct: 109 GLHRSAINSI------TVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNC 162
Query: 134 IDLWLESHKTCPVCRSDLDL 153
ID WL SHK CP+CR+ + L
Sbjct: 163 IDTWLLSHKNCPLCRAPVLL 182
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 71 DSPANPGLHPSLIQAFPA--FAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHV 128
D+ +N GL + + P F + KD GLEC+ICL+E + RLL C H
Sbjct: 96 DALSNTGLTSFELSSLPIVFFRQDSCKD------GLECSICLSELVKGDKARLLPKCNHS 149
Query: 129 FHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSN 177
FH ECID+W +SH TCP+CR+ + P+ + K N+ N T +N
Sbjct: 150 FHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQVPDNAENAGTTNN 198
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 78 LHPSLIQAFPAFAYS-------TVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFH 130
+ P ++++ P YS ++ G+ECA+CLAE ED R L C H FH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 131 QECIDLWLESHKTCPVCR 148
EC+D+WL SH TCP+CR
Sbjct: 159 AECVDMWLGSHSTCPLCR 176
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 66 AAGTSDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVC 125
A D N GL ++Q+ + DF K GLECA+CL++ D + R+L C
Sbjct: 84 AQSQEDPLHNAGLDSKILQSIHVVVFKCT-DF---KDGLECAVCLSDLVDGDKARVLPRC 139
Query: 126 YHVFHQECIDLWLESHKTCPVCRS 149
H FH +CID+W +SH TCP+CR+
Sbjct: 140 NHGFHVDCIDMWFQSHSTCPLCRN 163
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 75 NPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECI 134
+ GL S+I + P F Y + + EC ICL +E + R L C H FH ECI
Sbjct: 109 DKGLDSSVISSIPLFVYEENE--EEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECI 166
Query: 135 DLWLESHKTCPVCRS----------DLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLED- 183
D+WL SH TCP+CRS +L L N++E+ + S SNVS
Sbjct: 167 DMWLSSHSTCPLCRSPVLAAVSDEENLKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRV 226
Query: 184 AISIFIKEDEEARG-DNGEQVVNPNIIKQNE 213
++S+ + ED+ G D+GE+ V + +E
Sbjct: 227 SLSLSVMEDDLKTGDDDGEEEVRIEVFDDDE 257
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 77 GLHPSLIQAFPAFAYSTVKDFRRQK---YGLECAICLAEFEDDNILRLLTVCYHVFHQEC 133
GL +LI TV +RR + +C++CL EF D LRLL C H FHQ+C
Sbjct: 131 GLDETLINKI------TVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQC 184
Query: 134 IDLWLESHKTCPVCRSDL 151
ID WL+SH CP+CR+++
Sbjct: 185 IDTWLKSHSNCPLCRANI 202
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 22 PITIILTVTLLV--FFFVGFFSVYFCRCFME----NIVNTWQL---RQSPSGNAAGTSDS 72
PI + + +L F V ++ V+ +C + +I+ + L R++ S
Sbjct: 35 PILAVAVIGILATAFLLVSYY-VFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPE 93
Query: 73 PANPGLHPSLIQAFPAFAYSTVKD-----------FRRQKYGLECAICLAEFEDDNILRL 121
+ GL S+I+A P F + D +K EC++CL+EF+D+ LR+
Sbjct: 94 LRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRI 153
Query: 122 LTVCYHVFHQECIDLWLESHKTCPVCRS 149
+ C H+FH +CID+WL+++ CP+CR+
Sbjct: 154 IPNCSHLFHIDCIDVWLQNNANCPLCRT 181
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 70 SDSPANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVF 129
S SP + L +++ P F YS+ K+ + EC++CL+EFE+++ RLL C H F
Sbjct: 73 SASPRDQALDQAVLDKIPIFVYSS-KNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 131
Query: 130 HQECIDLWLESHKTCPVCRSDLDLPQNSLE 159
H +CID W S TCP+CR+ + P +E
Sbjct: 132 HVDCIDTWFRSRSTCPLCRAPVQPPFQVIE 161
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 78 LHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHVFHQECIDLW 137
L SLI++ + Y + F +C++CL+EF+++ LRLL C H FH CID W
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESS---DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTW 190
Query: 138 LESHKTCPVCRSDLDLPQNSLEKSPLLFRSNSMNNITGSNVSTLEDAISIFIKEDEEARG 197
L+SH CP+CR+ + + +++E ++ +N +++ST +D++ + + E +R
Sbjct: 191 LKSHSNCPLCRAFI-VTSSAVE---IVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRS 246
Query: 198 DN 199
N
Sbjct: 247 RN 248
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 78 LHPSLIQAFPAFAYSTVKDFRRQKYGLE-CAICLAEFEDDNILRLLTVCYHVFHQECIDL 136
L P++++ P F YS + + LE C++CL+EFE+D+ R+L C HVFH +CID
Sbjct: 88 LDPTVLEKIPIFVYSV----KTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDT 143
Query: 137 WLESHKTCPVCRSDLDLPQNSLEKSPL 163
W S +CP+CR+ + Q E P+
Sbjct: 144 WFRSRSSCPLCRAPVQPAQPVTEPEPV 170
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 23/155 (14%)
Query: 72 SPANPGLHPSLIQAFPAFAYS---TVKDFRRQKYGLECAICLAEFEDDNILRLLTVCYHV 128
S A GL + + P Y TV D +C++CL +++ + L+ + C H
Sbjct: 67 STAELGLSKDIREMLPIVIYKESFTVND-------TQCSVCLGDYQAEEKLQQMPSCGHT 119
Query: 129 FHQECIDLWLESHKTCPVCRSDLDLPQNSLEKSPLLFR-SNSMNNITGSNVSTLEDAIS- 186
FH ECIDLWL SH TCP+CR L +P+ S++ S +S+ N G ST D+ S
Sbjct: 120 FHMECIDLWLTSHTTCPLCRLSL-IPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSA 178
Query: 187 ----IFIKEDEEARGDNGEQVVNPNIIKQNERYEK 217
I I + EE D+ E ++K++E ++
Sbjct: 179 TEAIIHIDDVEEGNRDSIE------VVKESEENDR 207
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 68 GTSDSP-----ANPGLHPSLIQAFPAFAYSTVKDFRRQKYGLECAICLAEFEDDNILRLL 122
G D P + GL +LI+ F ++ + G +C+ICL EF +D LRLL
Sbjct: 113 GDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKIN-GTDCSICLGEFNEDESLRLL 171
Query: 123 TVCYHVFHQECIDLWLESHKTCPVCRSDLDLP 154
C H FH CID WL+SH CP+CR+ + +P
Sbjct: 172 PKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVP 203
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 11 YPPHAENYASPPITIILTVT--LLVFFFVGFFSVYFCRCFMENIVNTWQLRQSPSGNAAG 68
Y P ++ +S I+T+T +L GFF V F + VN S N
Sbjct: 70 YLPSQDSSSSLDAISIITITGAVLAILLTGFFLVAK---FFSDSVNRVNQGTYQSDNEDN 126
Query: 69 TS------------DSPA----NPGLHPSLIQAFPAFAYSTVKDFRRQKYGLE---CAIC 109
+ D P GL S+I + T+ +++R +E C +C
Sbjct: 127 DTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSI------TICNYKRGDGLIERTDCPVC 180
Query: 110 LAEFEDDNILRLLTVCYHVFHQECIDLWLESHKTCPVCRSDLDL 153
L EFE+D LRLL C H FH CID WL SH CP+CR+ + +
Sbjct: 181 LNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAM 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,363,268
Number of Sequences: 539616
Number of extensions: 4833808
Number of successful extensions: 13955
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 224
Number of HSP's that attempted gapping in prelim test: 13391
Number of HSP's gapped (non-prelim): 612
length of query: 296
length of database: 191,569,459
effective HSP length: 117
effective length of query: 179
effective length of database: 128,434,387
effective search space: 22989755273
effective search space used: 22989755273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)