BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047091
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
Length = 481
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 4 LNDVITGTIFLGTRLYMQAVNQEST--------NLHSTAVVLLNTRMLKSISSVKEMVKP 55
+NDV+ G G Y+ + ST L V +N R I + +M+
Sbjct: 259 VNDVLLGMTQAGLSRYLSSKYDGSTAEKKKILEKLRVRGAVAINLRPATKIEDLADMMAK 318
Query: 56 DSKAPWGNHFAFLHVSVPQLTNAEIQNPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKK 115
SK WGN V P +E ++PL++IR+A+ + K+ S A+ +++ K
Sbjct: 319 GSKCRWGNFIG--TVIFPLWVKSE-KDPLEYIRRAKATMDRKKISLEAFFFYGIIKFTLK 375
Query: 116 FRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSY 175
F G + F ++S+A +N+ GP E+++ +H I + + Q+L + +SY
Sbjct: 376 FFGGKAVEAFGKRIFGHTSLAFSNVKGPDEEISFFHHPISYIAGSALVGAQALNIHFISY 435
Query: 176 MGNLRVSLGAEEGFIDSP-KLKSCIENAFEMMLNA 209
+ + ++L + I P +L + A E++ +A
Sbjct: 436 VDKIVINLAVDTTTIQDPNRLCDDMVEALEIIKSA 470
>sp|P67209|Y3115_MYCBO Putative diacyglycerol O-acyltransferase Mb3115 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3115 PE=3
SV=1
Length = 474
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 128 GSLNNSSIAITNMMGPVEKMTLANH---AIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLG 184
G L ++++ I+NM GP E++ LA A GL + G+ L VT S L +++G
Sbjct: 377 GKLPSANVVISNMKGPTEQLYLAGAPLVAFSGLPIVPPGA--GLNVTFASINTALCIAIG 434
Query: 185 AEEGFIDSP-KLKSCIENAF-EMMLNAASATPSNAN 218
A + P +L ++ AF E+ A + +P+ +
Sbjct: 435 AAPEAVHEPSRLAELMQRAFTELQTEAGTTSPTTSK 470
>sp|P67208|TGS4_MYCTU Probable diacyglycerol O-acyltransferase Tgs4 OS=Mycobacterium
tuberculosis GN=tgs4 PE=1 SV=1
Length = 474
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 128 GSLNNSSIAITNMMGPVEKMTLANH---AIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLG 184
G L ++++ I+NM GP E++ LA A GL + G+ L VT S L +++G
Sbjct: 377 GKLPSANVVISNMKGPTEQLYLAGAPLVAFSGLPIVPPGA--GLNVTFASINTALCIAIG 434
Query: 185 AEEGFIDSP-KLKSCIENAF-EMMLNAASATPSNAN 218
A + P +L ++ AF E+ A + +P+ +
Sbjct: 435 AAPEAVHEPSRLAELMQRAFTELQTEAGTTSPTTSK 470
>sp|Q9P778|DPP5_SCHPO Dipeptidyl-peptidase 5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC1711.12 PE=3 SV=1
Length = 683
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 38 LNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81
LNTR LKS+S+ K A GNH A+L + PQ + + Q
Sbjct: 256 LNTRNLKSLSTAKGACSSPRLAKDGNHIAWLEMQTPQYESDQNQ 299
>sp|B3EL62|RPOC_CHLPB DNA-directed RNA polymerase subunit beta' OS=Chlorobium
phaeobacteroides (strain BS1) GN=rpoC PE=3 SV=1
Length = 1498
Score = 32.3 bits (72), Expect = 2.8, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 10 GTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEM-VKPDS--------KAP 60
G +F GT M A N+E LH+ V + R+ + ++ + + PD K
Sbjct: 563 GKLFYGTEEVMIAFNEERIGLHALVFVHYDGRIEQKFDPLRMLDIIPDDQPEQKEWLKTK 622
Query: 61 WGNHFAFLHVSVPQLTNAEIQNPLKFIRK------AQEIIQSKRSSFGAYLTAKLLETVK 114
G + + L N + + FI K A+++I S G TA+ L+ +K
Sbjct: 623 IGENKILVTTVGRVLFNRYVPEKIGFINKVIDKKGAKDLISKLSSEVGNVATAEFLDNIK 682
Query: 115 KFRGH 119
+ H
Sbjct: 683 QVGFH 687
>sp|Q12301|YD180_YEAST Uncharacterized membrane protein YDL180W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YDL180W PE=1
SV=1
Length = 547
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 106 TAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSP 165
T K +K+F TA + + G L + +N+M +T+ I +YF+ V
Sbjct: 322 TTKSFTPIKRFIAFSTAYQLVTGLLLMILVVGSNIM-----LTIGESLILSMYFVYVRGH 376
Query: 166 QSLVVTIVSYMGNLRVS 182
+ L +V+Y G+ +S
Sbjct: 377 EGLFTPVVNYFGSRTIS 393
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,238,269
Number of Sequences: 539616
Number of extensions: 2412043
Number of successful extensions: 6133
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6129
Number of HSP's gapped (non-prelim): 8
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)