Query 047091
Match_columns 229
No_of_seqs 110 out of 792
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:30:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047091.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047091hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06974 DUF1298: Protein of u 100.0 2.6E-38 5.6E-43 253.1 18.7 150 57-209 3-153 (153)
2 TIGR02946 acyl_WS_DGAT acyltra 100.0 2.7E-34 5.8E-39 264.3 23.1 190 2-210 250-446 (446)
3 COG4908 Uncharacterized protei 98.8 2.2E-07 4.8E-12 83.7 15.4 188 2-207 239-437 (439)
4 PRK09294 acyltransferase PapA5 98.2 2.4E-05 5.2E-10 71.6 13.3 174 2-208 230-410 (416)
5 PF07247 AATase: Alcohol acety 97.7 0.0048 1E-07 57.5 19.3 179 2-190 273-463 (480)
6 PRK12316 peptide synthase; Pro 94.6 1.2 2.5E-05 53.3 16.5 177 2-208 2843-3022(5163)
7 PRK12467 peptide synthase; Pro 93.5 2.5 5.5E-05 49.5 16.3 176 2-207 294-477 (3956)
8 PRK12467 peptide synthase; Pro 92.8 4.6 9.9E-05 47.5 17.0 177 2-208 1359-1539(3956)
9 PF00755 Carn_acyltransf: Chol 92.5 2.6 5.7E-05 40.7 12.8 68 131-208 522-591 (591)
10 PRK10252 entF enterobactin syn 91.1 9.9 0.00021 39.7 16.0 170 2-207 249-424 (1296)
11 PRK12316 peptide synthase; Pro 90.1 13 0.00028 44.9 17.3 176 2-207 294-475 (5163)
12 PRK05691 peptide synthase; Val 87.2 25 0.00054 42.0 16.9 177 2-207 1973-2152(4334)
13 PF00198 2-oxoacid_dh: 2-oxoac 84.3 25 0.00053 29.9 12.9 54 131-194 145-211 (231)
14 PLN02528 2-oxoisovalerate dehy 82.9 9.8 0.00021 35.3 9.3 20 2-21 239-258 (416)
15 PLN02663 hydroxycinnamoyl-CoA: 82.2 41 0.00089 30.9 13.7 62 2-75 249-310 (431)
16 PRK05704 dihydrolipoamide succ 79.2 50 0.0011 30.6 12.5 20 2-21 234-253 (407)
17 PHA00687 hypothetical protein 76.1 4 8.6E-05 25.7 3.0 26 73-102 26-51 (56)
18 TIGR03443 alpha_am_amid L-amin 75.5 99 0.0021 32.8 15.0 153 2-207 46-201 (1389)
19 PRK05691 peptide synthase; Val 75.3 1.1E+02 0.0024 36.8 16.5 172 2-207 920-1097(4334)
20 PF02458 Transferase: Transfer 75.1 64 0.0014 29.3 12.1 61 3-75 252-312 (432)
21 PLN03157 spermidine hydroxycin 74.7 72 0.0016 29.5 12.8 62 2-75 257-318 (447)
22 TIGR01349 PDHac_trf_mito pyruv 68.8 1E+02 0.0022 28.8 12.6 20 2-21 261-280 (435)
23 PRK14843 dihydrolipoamide acet 68.7 39 0.00085 30.5 8.9 18 2-19 174-191 (347)
24 TIGR01347 sucB 2-oxoglutarate 67.9 96 0.0021 28.7 11.4 20 2-21 230-249 (403)
25 PRK11856 branched-chain alpha- 67.7 1E+02 0.0022 28.3 12.2 20 2-21 239-258 (411)
26 PTZ00144 dihydrolipoamide succ 66.8 43 0.00093 31.2 8.9 21 2-22 245-265 (418)
27 PLN02481 Omega-hydroxypalmitat 64.9 34 0.00073 31.6 8.0 62 2-75 262-323 (436)
28 PRK11855 dihydrolipoamide acet 64.6 1.4E+02 0.003 28.7 12.5 20 2-21 374-393 (547)
29 TIGR01348 PDHac_trf_long pyruv 64.4 52 0.0011 31.7 9.3 20 2-21 373-392 (546)
30 KOG3717 Carnitine O-acyltransf 60.6 1.1E+02 0.0024 29.6 10.4 57 156-212 546-604 (612)
31 PRK11854 aceF pyruvate dehydro 57.0 1.2E+02 0.0025 29.8 10.4 20 2-21 460-479 (633)
32 PRK11857 dihydrolipoamide acet 56.9 1.4E+02 0.0031 26.4 12.0 21 2-22 132-152 (306)
33 PLN02226 2-oxoglutarate dehydr 50.8 2.2E+02 0.0049 26.9 11.4 20 2-21 290-309 (463)
34 KOG3719 Carnitine O-acyltransf 48.3 1.4E+02 0.003 28.8 8.9 60 151-211 572-631 (638)
35 KOG3716 Carnitine O-acyltransf 46.4 87 0.0019 31.0 7.4 85 132-216 672-762 (764)
36 COG5435 Uncharacterized conser 45.7 88 0.0019 24.8 6.2 48 163-210 17-65 (147)
37 PF13745 HxxPF_rpt: HxxPF-repe 45.3 97 0.0021 21.1 6.7 63 133-196 26-89 (91)
38 PRK03762 hypothetical protein; 42.9 79 0.0017 23.5 5.3 42 168-211 42-84 (103)
39 PRK12270 kgd alpha-ketoglutara 41.0 4.5E+02 0.0097 27.8 11.6 148 2-203 170-348 (1228)
40 PRK14628 hypothetical protein; 39.4 93 0.002 23.7 5.3 42 168-211 56-98 (118)
41 PRK14623 hypothetical protein; 32.5 1.2E+02 0.0027 22.5 5.0 41 168-210 38-79 (106)
42 PF02599 CsrA: Global regulato 30.2 80 0.0017 20.6 3.2 31 168-198 18-50 (54)
43 PRK14621 hypothetical protein; 27.6 1.8E+02 0.0039 21.8 5.2 36 175-210 46-82 (111)
44 COG1020 EntF Non-ribosomal pep 26.5 5.7E+02 0.012 24.3 15.6 176 2-211 18-195 (642)
45 PF14475 Mso1_Sec1_bdg: Sec1-b 22.4 1.1E+02 0.0023 18.9 2.5 16 10-25 20-35 (41)
46 PF01359 Transposase_1: Transp 22.2 2.9E+02 0.0062 19.4 5.9 41 168-208 32-72 (81)
47 PRK14625 hypothetical protein; 22.0 2.6E+02 0.0056 21.0 5.1 41 168-210 39-82 (109)
48 PF08727 P3A: Poliovirus 3A pr 22.0 1.2E+02 0.0025 20.1 2.8 22 4-25 20-41 (57)
49 COG0718 Uncharacterized protei 21.7 2.2E+02 0.0047 21.2 4.6 41 168-210 42-85 (105)
50 COG0304 FabB 3-oxoacyl-(acyl-c 21.6 70 0.0015 29.7 2.3 53 175-227 253-306 (412)
51 PRK14622 hypothetical protein; 21.2 2.9E+02 0.0063 20.4 5.2 36 175-210 43-81 (103)
52 PRK14624 hypothetical protein; 21.2 2.5E+02 0.0054 21.2 4.9 36 175-210 48-86 (115)
53 PRK00153 hypothetical protein; 20.9 2.8E+02 0.0062 20.2 5.1 42 168-211 40-84 (104)
54 PRK14627 hypothetical protein; 20.7 3E+02 0.0065 20.1 5.1 41 168-210 38-81 (100)
55 PF00668 Condensation: Condens 20.3 2.9E+02 0.0063 22.7 5.8 33 31-74 266-300 (301)
56 PRK00587 hypothetical protein; 20.2 2.9E+02 0.0063 20.3 4.9 36 175-210 42-80 (99)
No 1
>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=100.00 E-value=2.6e-38 Score=253.09 Aligned_cols=150 Identities=30% Similarity=0.516 Sum_probs=135.9
Q ss_pred CCCCCCceEEEEEeeccccccCCCCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEE
Q 047091 57 SKAPWGNHFAFLHVSVPQLTNAEIQNPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIA 136 (229)
Q Consensus 57 ~~~~~gN~~~~~~~~Lp~~~~~~~~dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~ 136 (229)
++.+|||+||++.++||++. .+||+|||++++++|++.|++.++...+.+..++..+++......+..+...++|++
T Consensus 3 ~~~~~GN~~~~v~~pL~~~~---~~dpl~rl~~~~~~~~~~K~s~~a~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~v 79 (153)
T PF06974_consen 3 SKARWGNQFGFVLLPLPTAD---PADPLERLRAAKRSMDRKKRSLEAMLSYALLALVPPLLGAKAARALSNRLSPKANLV 79 (153)
T ss_pred CCCCCcceEEEEEeecCcCC---ccCHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHhhhhhHHHHHhhccCcceEE
Confidence 56789999999999999962 279999999999999999999999999999988877766665556666666889999
Q ss_pred EeccCCCccceeecCceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHH
Q 047091 137 ITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNA 209 (229)
Q Consensus 137 vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~ 209 (229)
|||||||++|+||+|++|+.++++++..+++|+|+++||+|++.||+++|++.+ |+++|+++|+++|+||++|
T Consensus 80 iSNVPGP~~~l~~~G~~v~~i~~~~~~~~~~L~itv~SY~g~l~~gi~ad~~~vpD~~~l~~~~~~~l~eL~~A 153 (153)
T PF06974_consen 80 ISNVPGPQEPLYFAGARVEYIYPSPLGDGQALNITVFSYAGKLDFGIVADRDAVPDPQRLADCFEEALEELKEA 153 (153)
T ss_pred EecCCCChhheEECCeeeEEEEeeeecCCcceEEEEEEeCCEEEEEEEEccccCCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999997667889999999999999999999999999 9999999999999999875
No 2
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=100.00 E-value=2.7e-34 Score=264.30 Aligned_cols=190 Identities=23% Similarity=0.300 Sum_probs=168.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|+|||++|++++||++|+.++|+.++. ++++.||||+|...+ ...+||+++++.+.||++. +
T Consensus 250 ~T~ndvllaa~~~al~~~~~~~~~~~~~-~i~~~~pv~~R~~~~------------~~~~~N~~~~~~~~l~~~~----~ 312 (446)
T TIGR02946 250 VTINDVVLAAVAGALRRYLEERGELPDD-PLVAMVPVSLRPMED------------DSEGGNQVSAVLVPLPTGI----A 312 (446)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCCC-ceEEEEeeecccccc------------CCCCCCEEEEEEecCCCCC----C
Confidence 6999999999999999999998875543 699999999998642 3579999999999999998 8
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccC-----CCccEEEeccCCCccceeecCceeeE
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSL-----NNSSIAITNMMGPVEKMTLANHAIKG 156 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~-----~~~~~~vSNvpGP~~~l~l~G~~v~~ 156 (229)
||.+||++|+++|+..|++.+....+.+..++..+ |.++.+.+.+.+ ..+|+++||||||+.+++++|++|++
T Consensus 313 ~~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~l--P~~~~~~~~~~~~~~~~~~~~~~~SNvpg~~~~~~~~g~~v~~ 390 (446)
T TIGR02946 313 DPVERLSAIHASMTRAKESGQAMGANALLALSGLL--PAPLLRLALRALARKAQRLFNLVISNVPGPREPLYLAGAKLDE 390 (446)
T ss_pred CHHHHHHHHHHHHHHHHHhHhhcCHHHHHHHHHhc--cHHHHHHHHHHhhccCCCceeEEEeCCCCCCcccEecCeeEEE
Confidence 99999999999999999998888777777776665 666665544432 24699999999999999999999999
Q ss_pred eeeeec-CCCceEEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHh
Q 047091 157 LYFMVV-GSPQSLVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 157 ~~~~~p-~~~~~l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a 210 (229)
++++.| ..+++++++++||+|++.+++++|++.+ |+++|.++|+++|+||.++|
T Consensus 391 ~~~~~p~~~~~~l~~~~~sy~g~l~~~~~~d~~~~~d~~~l~~~~~~~l~~l~~~~ 446 (446)
T TIGR02946 391 LYPLSPLLDGQGLNITVTSYNGQLDFGLLADRDAVPDPQELADALEAALEELEAAA 446 (446)
T ss_pred eeccccccCCCeEEEEEEecCCeEEEEEeechhhCCCHHHHHHHHHHHHHHHHhhC
Confidence 999998 6788999999999999999999999999 99999999999999998764
No 3
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=98.80 E-value=2.2e-07 Score=83.69 Aligned_cols=188 Identities=16% Similarity=0.164 Sum_probs=119.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
.|||||+||++.----.|-.-+. +-...+..-|||++|....- .+...||..+...+.++.+. -.
T Consensus 239 aTiNDiilaa~~~fr~~y~~~~~--k~~~~lsi~~~VDlRkyl~s----------k~~sI~Nls~~~~i~I~~dd---~~ 303 (439)
T COG4908 239 ATINDIILAALLKFRLLYNTTHE--KANNYLSIDMPVDLRKYLPS----------KEESISNLSSYLTIVINVDD---VT 303 (439)
T ss_pred CcHHHHHHHHHHHHHHHHhhhch--hhcCeeeeceeeehhhhccc----------cccceeccceeEEEEEeccc---cc
Confidence 59999999998433333322222 22237888899999987531 12679999999999999864 47
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHH---HHHHHh-ccCCCccEEEeccCCC-cc-ceeecCceee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHET---AAKFIH-GSLNNSSIAITNMMGP-VE-KMTLANHAIK 155 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~---~~~~~~-~~~~~~~~~vSNvpGP-~~-~l~l~G~~v~ 155 (229)
|.-+-+++++..|+..|.+...+..+++..++..++-... +.+... ++... +.-||+ |- .+ ..-|+|-...
T Consensus 304 ~fe~t~~~vk~~~~~~k~gl~g~~~~yl~~ilp~~fkr~~~~~~kk~~~~~~~~g--~ssTNi-G~id~~~~~f~g~~~d 380 (439)
T COG4908 304 DFEKTLEKVKGIMNPKKIGLAGLYSFYLLGILPLMFKRKLYLKLKKLVEDRFVEG--KSSTNI-GIIDEEVPPFGGEAED 380 (439)
T ss_pred cHHHHHHHHHhhcCccccCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc--cccccc-cccccccCCcCceecc
Confidence 8888899999999987778777777776664443321111 111111 22222 222999 53 22 3335565555
Q ss_pred -Eeeeeec-C-CC-ceEEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHH
Q 047091 156 -GLYFMVV-G-SP-QSLVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMML 207 (229)
Q Consensus 156 -~~~~~~p-~-~~-~~l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~ 207 (229)
+-+.+.| + .| .-+++++..|.++|++++.--.+-- +.+++.+.|+.+|.++.
T Consensus 381 ~~~~~~~p~~~ap~Fpl~~tt~g~~~tLtinf~r~~dk~~~~~~fl~~f~~~l~~~~ 437 (439)
T COG4908 381 TDAFFFGPCKYAPVFPLGVTTYGYKLTLTINFYRTNDKKKITGHFLDLFAKELRETL 437 (439)
T ss_pred cceEEEeecccCccceeEEEEeccceEEEEEEEeecCcchHHHHHHHHHHhHhHHHh
Confidence 3455555 2 22 2378888888888888885433333 56788888888888764
No 4
>PRK09294 acyltransferase PapA5; Provisional
Probab=98.23 E-value=2.4e-05 Score=71.61 Aligned_cols=174 Identities=10% Similarity=0.012 Sum_probs=105.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|+|++++|+++.++.++.. . + +..+...+||++|..-+. +-.....+|-++.+...+.++. ..
T Consensus 230 ~t~~~~l~Aa~~~~l~r~~~---~-~-~~~i~~~~pv~~R~~l~p--------~~~~~~~~n~~g~~~~~~~~~~---~~ 293 (416)
T PRK09294 230 LTVNALVSAAILLAEWQLRR---T-P-HVPLPYVYPVDLRFRLTP--------PVAATEGTNLLGAATYLAEIGP---DT 293 (416)
T ss_pred CcHHHHHHHHHHHHHHHhcC---C-C-CCceeeecchhhHhhcCC--------CCCcccceeeEeeeeeeccccC---CC
Confidence 69999999999999998832 1 2 235778899999964210 0012467899988877766654 25
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccC-CCccEEEecc---CCCccceeecCceeeEe
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSL-NNSSIAITNM---MGPVEKMTLANHAIKGL 157 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~-~~~~~~vSNv---pGP~~~l~l~G~~v~~~ 157 (229)
++.+.+++++++++....... + ...+..+ .... ..+.. -...+.+||+ |+|+.|=. -+|..+
T Consensus 294 sf~ela~~v~~~~~~~l~~~~-v-~~~~~~~------~~~~---~~~~~~~~~~v~~Snlg~~~~~~~p~~---~~~~~~ 359 (416)
T PRK09294 294 DIVDLARAIAATLRADLADGV-I-QQSFLHF------GTAF---EGTPPGLPPVVFITNLGVAPPMRTPPG---LELEDI 359 (416)
T ss_pred CHHHHHHHHHHHHhhhhhcce-e-eehhhcc------cccc---cCCCCCCCCeEEEecCCcCCCCCCCCC---eEEEee
Confidence 899999999998875433322 1 1111111 0000 00000 1125788888 44444332 223333
Q ss_pred ee---eecCCCceEEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 047091 158 YF---MVVGSPQSLVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMMLN 208 (229)
Q Consensus 158 ~~---~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~~ 208 (229)
+. ..++.+ ....++.||+|+|.|++...-..+ +...+++++.+..+..
T Consensus 360 ~~~~~~~~~~~-~~~~~~~~~~~~l~i~f~~~~~~~--~~~~~~~~~~~~~~~~ 410 (416)
T PRK09294 360 HSQFYCAISVP-IGGYSCGVFAGRLLIEHHGHIAAP--GKSLEAIRELLCTVPS 410 (416)
T ss_pred eeeeeecccCc-eeEEEEeeecCceeeeeccCcCCc--cchHHHHHHHHHhhhh
Confidence 32 222222 244789999999999999985544 4777888877776654
No 5
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=97.74 E-value=0.0048 Score=57.55 Aligned_cols=179 Identities=17% Similarity=0.224 Sum_probs=103.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEee---cccccc-
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVS---VPQLTN- 77 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~---Lp~~~~- 77 (229)
+|+.-.+.|+++.||.+........ ....+.+.+|||+|..-+... ++ .....+|+.++..... -+....
T Consensus 273 ~TlT~~L~al~~~al~~~~~~~~~~-~~~~~~~~~pvnlR~~~p~~~--~~---~~~~~~g~~v~~~~~~~~~~~~~~~~ 346 (480)
T PF07247_consen 273 TTLTALLHALIALALSKVQLPKPKS-EKSSFKISTPVNLRRFLPEDS--EL---RDEYSYGNFVGGIDFSYSISPVSASR 346 (480)
T ss_pred CCHHHHHHHHHHHHHHhhhcccccc-cCceEEEEeeeeCCCCCCccc--cc---cccccceeEEEccceeeecccccccc
Confidence 5888889999999999753332222 223689999999998643100 00 0123567766653331 122110
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhccchhh--HHHHHHHHHHhhChHHHHHHHhccC---CCccEEEeccCCCccceeecCc
Q 047091 78 AEIQNPLKFIRKAQEIIQSKRSSFGAYL--TAKLLETVKKFRGHETAAKFIHGSL---NNSSIAITNMMGPVEKMTLANH 152 (229)
Q Consensus 78 ~~~~dp~~rL~~v~~~~~~~K~s~~~~~--~~~~~~l~~~l~~p~~~~~~~~~~~---~~~~~~vSNvpGP~~~l~l~G~ 152 (229)
...++.-+-.+++++.+....+...... ...+..++... .. +.+++.... +..+..|||+ |-...-.=++.
T Consensus 347 ~~~~~fW~~a~~~~~~i~~~i~~~~~~~~~~~~~~~~l~~~--~d-~~~~~~~~~~~~r~~t~evSNL-G~~~~~~~~~~ 422 (480)
T PF07247_consen 347 GSSENFWELARQIQKEIKESIKNGKSLNGVGFLMNDFLLKY--VD-IWDFFKSKIGKPRRSTFEVSNL-GVFDFEENGKW 422 (480)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHhcc--CC-HHHHHHhhcCCCCCCcEEEEeC-CcccCCCCCCe
Confidence 0112334556667776666333222221 11122222222 11 222232222 4679999999 65443455677
Q ss_pred eeeEeeeeec-C-CCceEEEEEEEeC-CeEEEEEEecCCCC
Q 047091 153 AIKGLYFMVV-G-SPQSLVVTIVSYM-GNLRVSLGAEEGFI 190 (229)
Q Consensus 153 ~v~~~~~~~p-~-~~~~l~v~v~SY~-g~l~l~v~aD~~~~ 190 (229)
+|.++++.-+ + .+..+.++++|-. |.|.++++--+..+
T Consensus 423 ~I~~~~Fsq~~~~~~~~f~~~viS~~~G~L~i~~s~~~~~~ 463 (480)
T PF07247_consen 423 KIEDMVFSQSAGVIGSAFSFNVISTKGGGLNISISWQEGIV 463 (480)
T ss_pred EEEEEEEeCCCCCCcCCEEEEEEEcCCCceEEEEEEeCCcc
Confidence 8999999876 3 3445889888976 89999999999988
No 6
>PRK12316 peptide synthase; Provisional
Probab=94.58 E-value=1.2 Score=53.26 Aligned_cols=177 Identities=12% Similarity=0.064 Sum_probs=104.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++.+++|+++..|++|..+ ..+...+|++-|...+. ..-.|-.+..+.+.+.++. ..
T Consensus 2843 vT~~~~l~aA~a~~L~r~tg~-------~dv~iG~pvsgR~~~~~-----------~~~iG~fvntlPlrv~l~~---~~ 2901 (5163)
T PRK12316 2843 VTLFMLLLASFQVLLHRYSGQ-------SDIRVGVPIANRNRAET-----------ERLIGFFVNTQVLRAQVDA---QL 2901 (5163)
T ss_pred CCHHHHHHHHHHHHHHHhcCC-------CceEEEeeecCCCchhH-----------HhhhhheecceeEEEecCC---CC
Confidence 589999999999999999432 25788899999964431 2235665655555555542 36
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMV 161 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~ 161 (229)
...+.|+++++.......... +....+.+.+. +.. ..... .-+..++..-+++.....+.|..+..+..-.
T Consensus 2902 t~~~ll~~v~~~~~~~~~hq~-~p~~~iv~~l~----~~r--~~~~~--plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2972 (5163)
T PRK12316 2902 AFRDLLGQVKEQALGAQAHQD-LPFEQLVEALQ----PER--SLSHS--PLFQVMYNHQSGERAAAQLPGLHIESFAWDG 2972 (5163)
T ss_pred CHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHhc----ccc--ccCCC--CceeEEEeeeccccccccCCCceeEeeeccC
Confidence 778888988887665543322 21122222221 110 00000 1133444444444444456666665432211
Q ss_pred cCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHHH
Q 047091 162 VGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMMLN 208 (229)
Q Consensus 162 p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~~ 208 (229)
.....-+.+.+.-..+.+.+.+..|.+..+ .+.+.+.|..-++++.+
T Consensus 2973 ~~~~~dL~l~v~~~~~~l~~~~~y~~~~~~~~~i~~l~~~f~~lL~~l~~ 3022 (5163)
T PRK12316 2973 AATQFDLALDTWESAEGLGASLTYATDLFDARTVERLARHWQNLLRGMVE 3022 (5163)
T ss_pred CccceeeEEEEEecCCcEEEEEEECcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 122233777777788889999999999883 55666666666666643
No 7
>PRK12467 peptide synthase; Provisional
Probab=93.48 E-value=2.5 Score=49.50 Aligned_cols=176 Identities=13% Similarity=0.069 Sum_probs=98.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++.+++|+++..|++|.. . ..+...+|++-|...+. ....|-.+..+.+.+.++. ..
T Consensus 294 ~T~~~vl~aA~a~lL~r~tg---~----~dv~iG~pvsgR~~~~~-----------~~~iG~fiNtlplrv~~~~---~~ 352 (3956)
T PRK12467 294 VTLFMVLLASFQTLLHRYSG---Q----SDIRIGVPNANRNRVET-----------ERLIGFFVNTQVLKAEVDP---QA 352 (3956)
T ss_pred CCHHHHHHHHHHHHHHHhcC---C----CCEEEEeccCCCCchhh-----------hcceeeeeeeeeeEeecCC---CC
Confidence 58999999999999999932 1 25788899999975431 2234544544455554442 35
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEe--ccCCC---ccceeecCceeeE
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAIT--NMMGP---VEKMTLANHAIKG 156 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vS--NvpGP---~~~l~l~G~~v~~ 156 (229)
+..+.|+++++++........ +....+.+.+. +.. ..... .-+...++ |.+.. .....+.|..+..
T Consensus 353 t~~~ll~~v~~~~~~a~~hq~-~p~~~l~~~l~----~~~--~~~~~--plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (3956)
T PRK12467 353 SFLELLQQVKRTALGAQAHQD-LPFEQLVEALQ----PER--SLSHS--PLFQVMFNHQNTATGGRDREGAQLPGLTVEE 423 (3956)
T ss_pred CHHHHHHHHHHHHHHHHhccc-CCHHHHHHHhC----CCC--CCCCC--CceEEEEEeecccccccccccccCCCceEEE
Confidence 788889999987666543322 21122222221 100 00000 01222332 33222 1134456666655
Q ss_pred eeeeecCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHH
Q 047091 157 LYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMML 207 (229)
Q Consensus 157 ~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~ 207 (229)
+.........-+.+.+....+.+.+.+..+.+..| .+.+.+.|..-++++.
T Consensus 424 ~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~lf~~~~~~~~~~~~~~~l~~~~ 477 (3956)
T PRK12467 424 LSWARHTAQFDLALDTYESAQGLWAAFTYATDLFEATTIERLATHWRNLLEAIV 477 (3956)
T ss_pred eecCCCceeeeeEEEEEecCCcEEEEEEEecccCCHHHHHHHHHHHHHHHHHHh
Confidence 43221111223667776778889999999999884 4445555555555544
No 8
>PRK12467 peptide synthase; Provisional
Probab=92.82 E-value=4.6 Score=47.47 Aligned_cols=177 Identities=10% Similarity=0.057 Sum_probs=97.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++.+++|+++..|.+|..+ ..+...+|++-|...+. ..-.|=.+..+.+++.++ ...
T Consensus 1359 vT~~~vl~aA~a~lL~r~sg~-------~dvv~G~pvsgR~~~~~-----------~~~vG~fvNtlplR~~~~---~~~ 1417 (3956)
T PRK12467 1359 VTLFMLLLASFQTLLHRYSGQ-------DDIRVGVPIANRNRAET-----------EGLIGFFVNTQVLRAEVD---GQA 1417 (3956)
T ss_pred CCHHHHHHHHHHHHHHHhhCC-------CCEEEEecccCCCchhh-----------hcceeeeeeeeEEEEecC---CCC
Confidence 589999999999999998432 25788999999975431 122444444444444333 236
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCcc-ceeecCceeeEeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVE-KMTLANHAIKGLYFM 160 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~-~l~l~G~~v~~~~~~ 160 (229)
+..+.|++++++........ .+....+.+.+. +.. ..... ..+.+++..-+.+.. ...+.|..+..+-.-
T Consensus 1418 t~~~~l~~v~~~~~~a~~hq-~~p~~~i~~~l~----~~r--~~~~~--pLFq~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1488 (3956)
T PRK12467 1418 SFQQLLQQVKQAALEAQAHQ-DLPFEQLVEALQ----PER--SLSHS--PLFQVMFNHQRDDHQAQAQLPGLSVESLSWE 1488 (3956)
T ss_pred CHHHHHHHHHHHHHHHHhcc-CCCHHHHHHHhc----ccc--cCCCC--CceeEEEEeecccccccccCCCceeEeeecC
Confidence 77888999988765543322 221122222211 110 00000 112334433222221 244556555432211
Q ss_pred ecCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHHH
Q 047091 161 VVGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMMLN 208 (229)
Q Consensus 161 ~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~~ 208 (229)
.......+.+.+.-..+.+.+.+..|.+..| .+.+.+.|..-++++.+
T Consensus 1489 ~~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~ 1539 (3956)
T PRK12467 1489 SQTAQFDLTLDTYESSEGLQASLTYATDLFEASTIERLAGHWLNLLQGLVA 1539 (3956)
T ss_pred CcccccceEEEEEecCCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence 1111233677776677899999999999884 45566666666666543
No 9
>PF00755 Carn_acyltransf: Choline/Carnitine o-acyltransferase; InterPro: IPR000542 A number of eukaryotic acetyltransferases can, on the basis of sequence similarities, be grouped together into a family. These enzymes include: Choline o-acetyltransferase 2.3.1.6 from EC, an enzyme that catalyses the biosynthesis of the neurotransmitter acetylcholine []. Carnitine o-acetyltransferase 2.3.1.7 from EC []. Peroxisomal carnitine octanoyltransferase 2.3.1.137 from EC, a fatty acid beta-oxidation pathway enzyme which is involved in the transport of medium-chain acyl-coenzyme A's from peroxisome to mitochondria []. Mitochondrial carnitine palmitoyltransferases I and II 2.3.1.21 from EC (CPT), enzymes involved in fatty acid metabolism and transport []. Mycoplasma pneumoniae putative acetyltransferase C09_orf600. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 2DEB_B 2H4T_A 2FW3_A 2RCU_B 2FYO_A 1S5O_A 1NM8_A 1T7Q_B 2H3W_B 1NDI_B ....
Probab=92.55 E-value=2.6 Score=40.72 Aligned_cols=68 Identities=12% Similarity=0.074 Sum_probs=49.4
Q ss_pred CCccEEEeccCCCccceeecCceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCC-C-ChhHHHHHHHHHHHHHHH
Q 047091 131 NNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGF-I-DSPKLKSCIENAFEMMLN 208 (229)
Q Consensus 131 ~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~-~-d~~~l~~~~~~~l~el~~ 208 (229)
.+..+..|+++++. ...++|+|..+.|.+|+-.-..+.+.|+|++=++. - |.++|.+.++++|.++++
T Consensus 522 ~~~~lsTS~~~~~~----------~~~~gfgpv~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~f~~~l~~al~dm~d 591 (591)
T PF00755_consen 522 SNFVLSTSQVPSPA----------LSGGGFGPVVPDGYGICYNIQPDSISFSISSFKSCPETSSERFAKALEQALRDMRD 591 (591)
T ss_dssp TS-SEEEEEEEESS----------SEEEE---SSTTSEEEEEEEESSEEEEEEEEETTSTTS-HHHHHHHHHHHHHHHHH
T ss_pred CCceeecccccccc----------cccccccCCCCcceEEEEEecCCeEEEEEEecCCCCcccHHHHHHHHHHHHHHHhC
Confidence 45566667776544 34456777667788888777899999999998863 3 999999999999999874
No 10
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=91.11 E-value=9.9 Score=39.71 Aligned_cols=170 Identities=9% Similarity=0.043 Sum_probs=92.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|.+.+++|+++-.|.+|..+ ..+...+|++-|...+. ....|-.+..+.+.+.++. ..
T Consensus 249 ~~~~~~l~aa~~~lL~r~sg~-------~dv~ig~p~sgR~~~~~-----------~~~vG~fvntlplr~~~~~---~~ 307 (1296)
T PRK10252 249 VQRPDLALALVALWLGRLCGR-------MDYAAGFIFMRRLGSAA-----------LTATGPVLNVLPLRVHIAA---QE 307 (1296)
T ss_pred CCHHHHHHHHHHHHHHHHhCC-------CceEEEEEecCCCchhh-----------hcCCCcccceEEEEEecCC---CC
Confidence 477899999999999988532 25788899999975431 2346666655555555432 26
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEE--eccCCCccceeecCceeeEeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAI--TNMMGPVEKMTLANHAIKGLYF 159 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~v--SNvpGP~~~l~l~G~~v~~~~~ 159 (229)
...+.|+++++.+........ +....+.+.+... . -...+| ..+| -|.+ ....+.|.......
T Consensus 308 tf~~~l~~~~~~~~~~~~h~~-~p~~~i~~~l~~~--~-----~~~~lf---~~~~~~~~~~---~~~~~~~~~~~~~~- 372 (1296)
T PRK10252 308 TLPELATRLAAQLKKMRRHQR-YDAEQIVRDSGRA--A-----GDEPLF---GPVLNIKVFD---YQLDFPGVQAQTHT- 372 (1296)
T ss_pred CHHHHHHHHHHHHHHHHhhcC-CCHHHHHHHhcCc--c-----CCCCce---eEEEEeeecc---cccCcCCccceeee-
Confidence 778888888888766543322 1112222222110 0 000111 2222 2222 12334454432211
Q ss_pred eecCCCceEEEEEE-EeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHH
Q 047091 160 MVVGSPQSLVVTIV-SYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMML 207 (229)
Q Consensus 160 ~~p~~~~~l~v~v~-SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~ 207 (229)
...+...-+.+.+. .-.|.+.+.+..+.+..+ .+.+.+.|.+-++++.
T Consensus 373 ~~~~~~~dl~l~~~~~~~~~l~~~~~y~~~~f~~~~i~~l~~~~~~ll~~~~ 424 (1296)
T PRK10252 373 LATGPVNDLELALFPDEHGGLSIEILANPQRYDEATLIAHAERLKALIAQFA 424 (1296)
T ss_pred cCCCccCCeEEEEEECCCCcEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 11111123555554 346789999999988774 4445555555555543
No 11
>PRK12316 peptide synthase; Provisional
Probab=90.12 E-value=13 Score=44.91 Aligned_cols=176 Identities=11% Similarity=0.060 Sum_probs=100.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|.+-+++|+++-.|.+|..+ ..+...+|++-|...+. ....|-.+..+.+.+.++. ..
T Consensus 294 ~T~~~~llaa~a~lL~~~tg~-------~dv~ig~pvs~R~~~~~-----------~~~vG~f~n~lplr~~~~~---~~ 352 (5163)
T PRK12316 294 LTLFMLLLGAFNVLLHRYSGQ-------TDIRVGVPIANRNRAEV-----------EGLIGFFVNTQVLRSVFDG---RT 352 (5163)
T ss_pred CCHHHHHHHHHHHHHHHhcCC-------CCeEEEeeeCCCCchhh-----------hcceeeeeeeEEEEEecCC---CC
Confidence 588999999999999998432 24788899999975432 2346666666666666553 25
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEe--ccCC-CccceeecCceeeEee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAIT--NMMG-PVEKMTLANHAIKGLY 158 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vS--NvpG-P~~~l~l~G~~v~~~~ 158 (229)
+..+.|+++++++........ +....+.+.+.. ... ..+ ...+.+.+. |.+. ......+.|.++..+-
T Consensus 353 tf~~~l~~v~~~~~~a~~hq~-~p~~~iv~~l~~---~r~----~~~-~plf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (5163)
T PRK12316 353 RVATLLAGVKDTVLGAQAHQD-LPFERLVEALKV---ERS----LSH-SPLFQVMYNHQPLVADIEALDTVAGLEFGQLE 423 (5163)
T ss_pred CHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHhCC---CCC----CCC-CCcEEEEEEeecccccccccccCCCceEEeec
Confidence 688899999988766544322 211122222111 000 000 011233333 3322 2233446666665432
Q ss_pred eeecCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHH
Q 047091 159 FMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMML 207 (229)
Q Consensus 159 ~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~ 207 (229)
........-+.+.+..-.|.+.+.+..+.+..+ .+.+.+.|..-++++.
T Consensus 424 ~~~~~~~~dL~l~v~~~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~i~ 475 (5163)
T PRK12316 424 WKSRTTQFDLTLDTYEKGGRLHAALTYATDLFEARTVERMARHWQNLLRGMV 475 (5163)
T ss_pred cCCCccceeEEEEEEEcCCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 211112233777777788999999999999884 4445555555555543
No 12
>PRK05691 peptide synthase; Validated
Probab=87.21 E-value=25 Score=41.97 Aligned_cols=177 Identities=12% Similarity=0.064 Sum_probs=96.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++-+++|+++-.|.+|..+ ..+...+|++-|...+. ..-.|-.+..+.+++.++. ..
T Consensus 1973 vT~~~~l~aA~a~lL~r~sg~-------~dvv~G~~vsgR~~~~~-----------~~~vG~fvntlPlrv~~~~---~~ 2031 (4334)
T PRK05691 1973 LTLFMTMTATLAALLYRYSGQ-------RDLRIGAPVANRIRPES-----------EGLIGAFLNTQVLRCQLDG---QM 2031 (4334)
T ss_pred CCHHHHHHHHHHHHHHHhcCC-------CCeEEEecccCCCchhh-----------hcceeeeeeeeeEEeecCC---CC
Confidence 588999999999999998543 25788899999975431 2234544444445444432 36
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMV 161 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~ 161 (229)
+..+.|++++++......... +....+.+ .+ .+.... ....+| ..-+.+-|.+-. ....+.|..+.....-.
T Consensus 2032 t~~~ll~~v~~~~~~~~~hq~-~p~~~iv~---~l-~~~r~~-~~~plf-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 2103 (4334)
T PRK05691 2032 SVSELLEQVRQTVIEGQSHQD-LPFDHLVE---AL-QPPRSA-AYNPLF-QVMCNVQRWEFQ-QSRQLAGMTVEYLVNDA 2103 (4334)
T ss_pred CHHHHHHHHHHHHHHHHhccc-CCHHHHHH---Hh-cccccc-CCCCce-EEEEEeeccccc-cccCCCCceeEeecccC
Confidence 788899999987665433221 21122222 22 111000 011112 111223333211 12335565554322111
Q ss_pred cCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHH
Q 047091 162 VGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMML 207 (229)
Q Consensus 162 p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~ 207 (229)
.....-+.+.+.-..+.+.+.+..|.+..| .+.+.+.|..-++++.
T Consensus 2104 ~~~~~dL~l~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~~~~~l~~~~ 2152 (4334)
T PRK05691 2104 RATKFDLNLEVTDLDGRLGCCLTYSRDLFDEPRIARMAEHWQNLLEALL 2152 (4334)
T ss_pred CccccceEEEEEecCCcEEEEEEECcccCCHHHHHHHHHHHHHHHHHHH
Confidence 111223667777778999999999999884 4445666666555553
No 13
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=84.25 E-value=25 Score=29.85 Aligned_cols=54 Identities=20% Similarity=0.333 Sum_probs=31.5
Q ss_pred CCccEEEeccCCCccceeecCceeeEeeeeecCCCce--EEEEEE-----------EeCCeEEEEEEecCCCCChhH
Q 047091 131 NNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQS--LVVTIV-----------SYMGNLRVSLGAEEGFIDSPK 194 (229)
Q Consensus 131 ~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~--l~v~v~-----------SY~g~l~l~v~aD~~~~d~~~ 194 (229)
+..+++|||+ |.- | +..+.|+.+ +|++ ++++-. .-...+.++++.|..++|...
T Consensus 145 ~g~TftisNl-G~~------g--~~~~~pii~-~pq~ail~vG~i~~~p~~~~~~~~~~~~~~lslt~DHRvidG~~ 211 (231)
T PF00198_consen 145 QGGTFTISNL-GMF------G--VESFTPIIN-PPQVAILGVGAIRDRPVVEDGEVVVRPVMNLSLTFDHRVIDGAE 211 (231)
T ss_dssp SS-SEEEEEG-GGT------T---SCEE-----TTSSEEEEEEEEEEEEEEETTCEEEEEEEEEEEEEETTTS-HHH
T ss_pred hccceeeeec-CCC------C--cceeEccCC-cccceEEEecceEEEEEEEeccceeeEEEEeEEeccceEEcHHH
Confidence 4568999999 432 2 344455543 3443 666543 246688999999999995444
No 14
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=82.91 E-value=9.8 Score=35.29 Aligned_cols=20 Identities=10% Similarity=0.139 Sum_probs=17.4
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+||.++-|++.||++|=.
T Consensus 239 ls~~~~likA~a~aL~~~P~ 258 (416)
T PLN02528 239 HTFLPFLIKSLSMALSKYPL 258 (416)
T ss_pred ccHHHHHHHHHHHHHHhCch
Confidence 48999999999999998743
No 15
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=82.21 E-value=41 Score=30.90 Aligned_cols=62 Identities=6% Similarity=-0.038 Sum_probs=40.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+|-+|++.|-+-.++-+-. +..++ .......+||+|..-.. +=+..-.||-+.......+.+
T Consensus 249 ~S~~dalsA~lW~~~~rA~---~~~~~-~~~~~~~~vd~R~rl~p--------~lp~~Y~GN~~~~~~~~~~~~ 310 (431)
T PLN02663 249 YSSYEMLAGHVWRSACKAR---GLPDD-QETKLYIATDGRSRLRP--------QLPPGYFGNVIFTATPIAVAG 310 (431)
T ss_pred cchHHHHHHHHHhhhhhcc---cCCCc-cceEEEEEecCCcCCCC--------CCCCCcccceEEecccccchh
Confidence 5778999998887777643 33333 35788899999976431 013445799877666555543
No 16
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=79.17 E-value=50 Score=30.55 Aligned_cols=20 Identities=5% Similarity=0.092 Sum_probs=17.6
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+||.++-|++.||++|=.
T Consensus 234 ls~~~~likA~a~AL~~~P~ 253 (407)
T PRK05704 234 LGFMSFFVKAVVEALKRYPE 253 (407)
T ss_pred cCHHHHHHHHHHHHHHhCcH
Confidence 48999999999999998754
No 17
>PHA00687 hypothetical protein
Probab=76.07 E-value=4 Score=25.71 Aligned_cols=26 Identities=12% Similarity=0.339 Sum_probs=21.9
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHhhhccc
Q 047091 73 PQLTNAEIQNPLKFIRKAQEIIQSKRSSFG 102 (229)
Q Consensus 73 p~~~~~~~~dp~~rL~~v~~~~~~~K~s~~ 102 (229)
|+.. .||+.|++.|.+.+.+.|+...
T Consensus 26 pitr----adplarvkaiekatervkrqyp 51 (56)
T PHA00687 26 PITR----ADPLARVKAIEKATERVKRQYP 51 (56)
T ss_pred Cccc----cChHHHHHHHHHHHHHHHHhcc
Confidence 6665 9999999999999999887543
No 18
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=75.45 E-value=99 Score=32.79 Aligned_cols=153 Identities=10% Similarity=-0.019 Sum_probs=84.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|...+++|+++..|++|..+ ..+..-+|++.|. | .++|.+.. ....
T Consensus 46 ~t~~~~l~aa~~~lL~r~sg~-------~dv~iG~~~~~R~--------------------~-----~lplr~~~-~~~~ 92 (1389)
T TIGR03443 46 STPFIILLAAFAALVYRLTGD-------EDIVLGTSSNKSG--------------------R-----PFVLRLNI-TPEL 92 (1389)
T ss_pred CCHHHHHHHHHHHHHHHHcCC-------CceEEEeeeCCCC--------------------c-----eEEEEecC-CCCC
Confidence 588899999999999998543 2477778887763 1 13333333 2336
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMV 161 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~ 161 (229)
+..+.|+++++++.......+ +....+.+.+... ... .. ...-+.+.+.+.+..... . +.
T Consensus 93 t~~~~l~~~~~~~~~~~~h~~-~p~~~i~~~l~~~--~~~----~~-~p~lf~~~~~~~~~~~~~---------~---~~ 152 (1389)
T TIGR03443 93 SFLQLYAKVSEEEKEGASDIG-VPFDELSEHIQAA--KKL----ER-TPPLFRLAFQDAPDNQQT---------T---YS 152 (1389)
T ss_pred CHHHHHHHHHHHHHHHHhccc-CCHHHHHHHhccc--cCC----CC-CCccEEEEeecCCccccc---------c---cc
Confidence 788889999988777654433 2222233322211 000 00 000122333333322111 1 11
Q ss_pred cCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHH
Q 047091 162 VGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMML 207 (229)
Q Consensus 162 p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~ 207 (229)
.....-|.+.+.--++.+.+.+..|.+..+ .+.+.+.|..-++++.
T Consensus 153 ~~~~~dl~~~v~~~~~~l~l~~~y~~~lf~~~~i~~l~~~f~~lL~~~~ 201 (1389)
T TIGR03443 153 TGSTTDLTVFLTPSSPELELSIYYNSLLFSSDRITIVADQLAQLLSAAS 201 (1389)
T ss_pred cCCccceEEEEEecCCcEEEEEEEchhcCCHHHHHHHHHHHHHHHHHHH
Confidence 111223666666678899999999999884 3445555555555543
No 19
>PRK05691 peptide synthase; Validated
Probab=75.33 E-value=1.1e+02 Score=36.84 Aligned_cols=172 Identities=12% Similarity=0.014 Sum_probs=90.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++.+++|+.+-.|++|..+ ..+...+|++-|...+. ....|-.+..+.+.+.++. ..
T Consensus 920 vT~~~vl~aa~allL~rytg~-------~dv~~G~~~sgR~~~~~-----------~~~vG~fintlplr~~~~~---~~ 978 (4334)
T PRK05691 920 ATLFMVLLAAFQALLHRYSGQ-------GDIRIGVPNANRPRLET-----------QGLVGFFINTQVLRAQLDG---RL 978 (4334)
T ss_pred CCHHHHHHHHHHHHHHHHhCC-------CCEEEEecccCCCchhh-----------hcceeeeeeeeeEEEecCC---CC
Confidence 589999999999999999432 24788899999965431 1234544555555544442 35
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccc-eeecCceeeEeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEK-MTLANHAIKGLYFM 160 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~-l~l~G~~v~~~~~~ 160 (229)
+..+.|+++++.......... +....+.+.+... .. ..+ ++..+..-+.+... ..+.|.....+ .+
T Consensus 979 t~~~ll~~v~~~~~~a~~h~~-~p~~~i~~~l~~~--~~------~~l---f~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1045 (4334)
T PRK05691 979 PFTALLAQVRQATLGAQAHQD-LPFEQLVEALPQA--RE------QGL---FQVMFNHQQRDLSALRRLPGLLAEEL-PW 1045 (4334)
T ss_pred CHHHHHHHHHHHHHHHHhhcc-CCHHHHHHHhCcc--CC------CCc---eeEEEEcccCCccccccCCCceeeee-cc
Confidence 678888888887655432211 1111122222111 00 011 23333322222111 11333333221 11
Q ss_pred ec-CCCceEEEEEEE-eCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHH
Q 047091 161 VV-GSPQSLVVTIVS-YMGNLRVSLGAEEGFID---SPKLKSCIENAFEMML 207 (229)
Q Consensus 161 ~p-~~~~~l~v~v~S-Y~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~ 207 (229)
.. ....-+.+.+.. .+|.+.+.+..+.+..+ .+.+.+.|..-++++.
T Consensus 1046 ~~~~~~~~l~l~~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~~~ 1097 (4334)
T PRK05691 1046 HSREAKFDLQLHSEEDRNGRLTLSFDYAAELFDAATIERLAEHFLALLEQVC 1097 (4334)
T ss_pred cCCcccceEEEEEEECCCCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 11 111224444432 35679999999998884 4556666666666554
No 20
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=75.05 E-value=64 Score=29.26 Aligned_cols=61 Identities=15% Similarity=0.089 Sum_probs=39.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 3 TLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 3 TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
|-||++.|.+-.++.+-..... +. .....++||+|..-+. +-+..-.||-+.......+.+
T Consensus 252 St~d~l~A~lWr~~~rar~~~~---~~-~~~l~~~vd~R~rl~p--------plp~~Y~GN~~~~~~~~~~~~ 312 (432)
T PF02458_consen 252 STFDALTALLWRCITRARGLPS---DE-TSRLSFAVDCRKRLNP--------PLPEGYFGNAVFFAFASATAG 312 (432)
T ss_dssp -HHHHHHHHHHHHHHHHHCHTT---TT-CEEEEEEEETHHHSSS-----------TTB-S--EEEEEEEEEHH
T ss_pred CeeEEEEEehhhhhcccccccc---cc-ccccccccccCCCcCC--------CcceeecCceEeecccccchh
Confidence 7799999999988887433322 22 3788899999975320 013456899999888888875
No 21
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=74.66 E-value=72 Score=29.50 Aligned_cols=62 Identities=11% Similarity=0.078 Sum_probs=40.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+|-+|++.|-+-.++-+-. +..++ .......+||+|..-+. +=+..-.||-+.......+.+
T Consensus 257 ~St~dalsA~lWr~~~rAr---~~~~~-~~~~l~~~vd~R~rl~P--------plp~~Y~GN~v~~~~~~~~~~ 318 (447)
T PLN03157 257 YTRYETVAGHVWRSACKAR---GHEPE-QPTALGICVDSRSRMQP--------PLPDGYFGNATLDVIAESTSG 318 (447)
T ss_pred ccHHHHHHHHHHHHHHHHc---cCCCC-CceEEEEEecCCCCCCC--------CCCCCcccceeeeccchhhHH
Confidence 4678999998888877643 32233 35788899999976431 013456799887666555543
No 22
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=68.76 E-value=1e+02 Score=28.78 Aligned_cols=20 Identities=25% Similarity=0.208 Sum_probs=17.6
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+++.++=|++.||++|=.
T Consensus 261 lt~~~~l~kA~a~AL~~~P~ 280 (435)
T TIGR01349 261 LSVNDFIIKASALALREVPE 280 (435)
T ss_pred ccHHHHHHHHHHHHHHhCcH
Confidence 48999999999999999744
No 23
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=68.65 E-value=39 Score=30.55 Aligned_cols=18 Identities=11% Similarity=0.086 Sum_probs=16.6
Q ss_pred cchhHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLY 19 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~y 19 (229)
.|+||.++=+++.||++|
T Consensus 174 ls~~~~likA~a~AL~~~ 191 (347)
T PRK14843 174 TTVTDLLSLAVVKTLMKH 191 (347)
T ss_pred ccHHHHHHHHHHHHHHhC
Confidence 489999999999999987
No 24
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=67.87 E-value=96 Score=28.67 Aligned_cols=20 Identities=0% Similarity=0.074 Sum_probs=17.5
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+||.++-|++.||++|=.
T Consensus 230 ls~~~~likA~a~AL~~~P~ 249 (403)
T TIGR01347 230 LGFMSFFVKAVVAALKRFPE 249 (403)
T ss_pred cCHHHHHHHHHHHHHHhCcH
Confidence 48999999999999999743
No 25
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=67.65 E-value=1e+02 Score=28.33 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=17.4
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+++.++-|++.||.+|=.
T Consensus 239 ls~~~~~ikav~~Al~~~P~ 258 (411)
T PRK11856 239 LTVTDFLIKAVALALKKFPE 258 (411)
T ss_pred ccHHHHHHHHHHHHHHhCcH
Confidence 48999999999999998743
No 26
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=66.76 E-value=43 Score=31.17 Aligned_cols=21 Identities=0% Similarity=-0.118 Sum_probs=18.3
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQA 22 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~ 22 (229)
.|+||.++=|++.||++|=.-
T Consensus 245 lS~~~~liKAva~AL~~~P~~ 265 (418)
T PTZ00144 245 LGFMSAFVKASTIALKKMPIV 265 (418)
T ss_pred ccHHHHHHHHHHHHHHhChHh
Confidence 489999999999999998554
No 27
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=64.93 E-value=34 Score=31.59 Aligned_cols=62 Identities=10% Similarity=0.078 Sum_probs=42.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+|-+|++.|-+-.++-+- ++..++ .......++++|..-+. +=+..-.||-+......++.+
T Consensus 262 ~S~~dal~A~iW~~~~rA---~~~~~~-~~~~l~~~vd~R~rl~P--------plp~~Y~GN~v~~~~~~~~~~ 323 (436)
T PLN02481 262 CSTFEALTAFVWRARTKA---LKMLPD-QQTKLLFAVDGRSRFNP--------PLPKGYFGNGIVLTNALTTAG 323 (436)
T ss_pred cChHHHHHHHHHHHHHhc---cCCCCC-CeEEEEEEEcCccCCCC--------CCCCCceeeeeeeccccccHH
Confidence 578999999999887763 333333 35788899999986321 013456899887777766665
No 28
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=64.64 E-value=1.4e+02 Score=28.74 Aligned_cols=20 Identities=5% Similarity=0.041 Sum_probs=17.3
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+++.++-|++.||++|=.
T Consensus 374 ~s~~~~likAv~~al~~~P~ 393 (547)
T PRK11855 374 LTMLPFFIKAVVAALKEFPV 393 (547)
T ss_pred CCHHHHHHHHHHHHHHhCcH
Confidence 37899999999999998744
No 29
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=64.37 E-value=52 Score=31.67 Aligned_cols=20 Identities=5% Similarity=0.144 Sum_probs=17.6
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+||.++-|++.||++|=.
T Consensus 373 ls~~~~l~kA~~~AL~~~P~ 392 (546)
T TIGR01348 373 LTVLHILMKAVAAALKKFPK 392 (546)
T ss_pred ccHHHHHHHHHHHHHHhCCh
Confidence 48999999999999999843
No 30
>KOG3717 consensus Carnitine O-acyltransferase CRAT [Lipid transport and metabolism]
Probab=60.57 E-value=1.1e+02 Score=29.58 Aligned_cols=57 Identities=11% Similarity=0.022 Sum_probs=46.5
Q ss_pred EeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCC--ChhHHHHHHHHHHHHHHHHhhc
Q 047091 156 GLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFI--DSPKLKSCIENAFEMMLNAASA 212 (229)
Q Consensus 156 ~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~--d~~~l~~~~~~~l~el~~~a~~ 212 (229)
.+++|+|.-+.|-+++---...++.|++++=+.-. |..+|+..++++|.+++++...
T Consensus 546 ~~m~yGpvv~dGYG~cYNp~~~~i~f~isaf~sc~~Ts~~rfak~L~~al~dmkdll~~ 604 (612)
T KOG3717|consen 546 IFMGYGPVVPDGYGCCYNPQEEHIIFAISAFRSCPETSASRFAKYLEQALDDMRDLLSN 604 (612)
T ss_pred eeeeecCcCCCCcccccCCCcceEEEEeeccccCccccHHHHHHHHHHHHHHHHHHHHh
Confidence 46677776666777775556789999999988866 9999999999999999988763
No 31
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=57.00 E-value=1.2e+02 Score=29.83 Aligned_cols=20 Identities=10% Similarity=-0.132 Sum_probs=17.3
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+||.++-|++.||++|=.
T Consensus 460 ~t~~~~likAva~Al~~~P~ 479 (633)
T PRK11854 460 ITPLVFIMKAVAAALEQMPR 479 (633)
T ss_pred ccHHHHHHHHHHHHHHhCCH
Confidence 37899999999999998743
No 32
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=56.87 E-value=1.4e+02 Score=26.45 Aligned_cols=21 Identities=14% Similarity=0.157 Sum_probs=18.0
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQA 22 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~ 22 (229)
.|+||.++-|++.||++|=.-
T Consensus 132 ls~~~~likA~a~AL~~~P~~ 152 (306)
T PRK11857 132 LTFLPFIAKAILIALKEFPIF 152 (306)
T ss_pred CCHHHHHHHHHHHHHHhCcHh
Confidence 489999999999999998543
No 33
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=50.76 E-value=2.2e+02 Score=26.89 Aligned_cols=20 Identities=5% Similarity=-0.220 Sum_probs=17.3
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLYMQ 21 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~ 21 (229)
.|+||.++-|++.||++|=.
T Consensus 290 lS~~~~liKAva~AL~~~P~ 309 (463)
T PLN02226 290 LGLMSGFIKAAVSALQHQPV 309 (463)
T ss_pred ccHHHHHHHHHHHHHHhCCH
Confidence 48999999999999998743
No 34
>KOG3719 consensus Carnitine O-acyltransferase CPT2/YAT1 [Lipid transport and metabolism]
Probab=48.27 E-value=1.4e+02 Score=28.78 Aligned_cols=60 Identities=3% Similarity=-0.053 Sum_probs=44.8
Q ss_pred CceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh
Q 047091 151 NHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMMLNAAS 211 (229)
Q Consensus 151 G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~~~a~ 211 (229)
|.+-....+|+|.-+.|.+|+-.=.++.+...|++-+..- .++|..+++.+|+|+...-.
T Consensus 572 gn~a~~~gGfgPvv~~GFGIGY~I~d~~vg~vVsS~~~q~-~~~f~~~leksL~ei~~~~~ 631 (638)
T KOG3719|consen 572 GNPALTAGGFGPVVPNGFGIGYIIKDDQVGAVVSSYKRQR-GARFMFMLEKSLDEIRSYLR 631 (638)
T ss_pred CchhhhccCccccccCCcceeeEeecCccceEEecccccc-HHHHHHHHHHHHHHHHHHHh
Confidence 4444555567775567777777668888888777765543 78999999999999987765
No 35
>KOG3716 consensus Carnitine O-acyltransferase CPTI [Lipid transport and metabolism]
Probab=46.43 E-value=87 Score=31.01 Aligned_cols=85 Identities=7% Similarity=0.013 Sum_probs=51.8
Q ss_pred CccEEEeccCCCccceeecCceeeEee---eeecCCCceEEEE-EEEeCCeEEEEEEecCCCC--ChhHHHHHHHHHHHH
Q 047091 132 NSSIAITNMMGPVEKMTLANHAIKGLY---FMVVGSPQSLVVT-IVSYMGNLRVSLGAEEGFI--DSPKLKSCIENAFEM 205 (229)
Q Consensus 132 ~~~~~vSNvpGP~~~l~l~G~~v~~~~---~~~p~~~~~l~v~-v~SY~g~l~l~v~aD~~~~--d~~~l~~~~~~~l~e 205 (229)
+--+.-|++|--+....=.......+. +|+|....|-+|+ ++-=++.+.|-|++=...- |.++|.+.+.++|.+
T Consensus 672 ~W~LSTSq~P~~q~~~~d~~~~p~~i~~GggFGpvaddGYGVsY~~~G~~~I~fHIsSk~Ss~~TDS~Rfg~hl~eal~d 751 (764)
T KOG3716|consen 672 KWLLSTSQTPNMQENSFDEDKSPDNISLGGGFGPVADDGYGVSYIFAGENAIFFHISSKHSSENTDSHRFGQHLKEALHD 751 (764)
T ss_pred ceeecccCCcccchhccCcccCccccccCCccCCccCCCceeEEEEecCceEEEEeecccccccccHHHHHHHHHHHHHH
Confidence 345667788766632221122222222 2444333445665 3333466777777766655 999999999999999
Q ss_pred HHHHhhcCCCC
Q 047091 206 MLNAASATPSN 216 (229)
Q Consensus 206 l~~~a~~~~~~ 216 (229)
+.+...+.+++
T Consensus 752 i~~Lf~~~~~~ 762 (764)
T KOG3716|consen 752 IADLFEDATAK 762 (764)
T ss_pred HHHHHhhhccc
Confidence 99988765543
No 36
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=45.68 E-value=88 Score=24.80 Aligned_cols=48 Identities=8% Similarity=0.081 Sum_probs=42.0
Q ss_pred CCCceEEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHh
Q 047091 163 GSPQSLVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 163 ~~~~~l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a 210 (229)
..++.++|=+.+=+|+-.++++..++.+ --+.+.+++++++..|++-.
T Consensus 17 w~DrSvNvf~~~~~gt~~~sfvIsRd~~~~g~~~~~y~~rql~~l~k~L 65 (147)
T COG5435 17 WQDRSVNVFVSGDNGTSGFSFVISRDPLEPGDTFPEYVQRQLALLRKQL 65 (147)
T ss_pred hccceEEEEEecCCCcceeEEEEecCCCCCCCcHHHHHHHHHHHHHhhC
Confidence 5578899999999999999999999999 67889999999999997643
No 37
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=45.25 E-value=97 Score=21.12 Aligned_cols=63 Identities=10% Similarity=0.116 Sum_probs=33.6
Q ss_pred ccEEEeccCCCccceeecCceeeEeeeeec-CCCceEEEEEEEeCCeEEEEEEecCCCCChhHHH
Q 047091 133 SSIAITNMMGPVEKMTLANHAIKGLYFMVV-GSPQSLVVTIVSYMGNLRVSLGAEEGFIDSPKLK 196 (229)
Q Consensus 133 ~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p-~~~~~l~v~v~SY~g~l~l~v~aD~~~~d~~~l~ 196 (229)
+.+.|+-.+.+...+.++|.+++.+ +... ....-|.+.+....|.+.+.+..+.+..+.+.+.
T Consensus 26 fqv~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~DL~l~~~~~~~~l~~~~~Y~~~lf~~~ti~ 89 (91)
T PF13745_consen 26 FQVMFNYQNFSQSALDLGGLRLEPI-PLENGGAKFDLTLEVREDGDGLRLQLEYNTDLFSEETIE 89 (91)
T ss_dssp -SEEEEEE----S----SSEEEEE--SS--SB-SSSEEEEEEE-SS-EEEEEEEETTT--HHHHH
T ss_pred cCeEEEEEecccccccCCCceEEEe-eccccceeeeEEEEEEecCCeEEEEEEEEhHhCCHHHHh
Confidence 3455555555556688899887653 3222 2223399999999999999999999977666554
No 38
>PRK03762 hypothetical protein; Provisional
Probab=42.93 E-value=79 Score=23.47 Aligned_cols=42 Identities=10% Similarity=0.177 Sum_probs=33.1
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHhh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAAS 211 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a~ 211 (229)
+.|++ -+.+-..++..|++++ |.+.|.|.+..++++-.+.+.
T Consensus 42 VkV~~--nG~~~i~~i~Id~~ll~D~e~LeDLI~aAiNdA~~k~~ 84 (103)
T PRK03762 42 VSVSA--NGKGEVIDISIDDSLLEDKESLQILLISAINDVYKMVE 84 (103)
T ss_pred EEEEE--EcCceEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44444 5777788999999999 999999999999888765543
No 39
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=41.04 E-value=4.5e+02 Score=27.79 Aligned_cols=148 Identities=15% Similarity=0.223 Sum_probs=76.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHh------cCCC---CCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeec
Q 047091 2 QTLNDVITGTIFLGTRLYMQAV------NQES---TNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSV 72 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~------g~~~---~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~L 72 (229)
+|+++.+.-|++.||++|=.-. +..| ....++..+-|++-.++ |.+ + +++
T Consensus 170 VSFThlI~kAvv~AL~~~P~mNasy~~~DGKp~iv~~~~VNlGiAVdl~~~d-----------------GsR-g-LVV-- 228 (1228)
T PRK12270 170 VSFTHLIGYALVQALKAFPNMNRHYAEVDGKPTLVTPAHVNLGLAIDLPKKD-----------------GSR-Q-LVV-- 228 (1228)
T ss_pred ccHHHHHHHHHHHHHHhCchhhceeeccCCCceeeccCCcceEEEEecCCCC-----------------CCc-c-eee--
Confidence 4789999999999999875421 1111 12245666666664322 111 1 222
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCc
Q 047091 73 PQLTNAEIQNPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANH 152 (229)
Q Consensus 73 p~~~~~~~~dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~ 152 (229)
|+=.+....+..+-.++.++-.++.|... | .|. -+...|+++||. |--+-.
T Consensus 229 PvIK~Ad~l~f~ef~~ay~dLV~KAR~gK--------------L-t~e--------D~~GgTFTISN~-G~iGt~----- 279 (1228)
T PRK12270 229 PAIKGAETMDFAQFWAAYEDIVRRARDGK--------------L-TAD--------DFQGTTISLTNP-GGIGTV----- 279 (1228)
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHcCC--------------C-CHH--------HhCCceEEEecC-Cccccc-----
Confidence 33222344666666666666555554331 1 121 134568899998 422111
Q ss_pred eeeEeeeeecCCCce--EEEEEEEe-----------------CCeEEEEEEecCCCC---ChhHHHHHHHHHH
Q 047091 153 AIKGLYFMVVGSPQS--LVVTIVSY-----------------MGNLRVSLGAEEGFI---DSPKLKSCIENAF 203 (229)
Q Consensus 153 ~v~~~~~~~p~~~~~--l~v~v~SY-----------------~g~l~l~v~aD~~~~---d~~~l~~~~~~~l 203 (229)
...|.. .+||+ |+++.+.| .--+.+++++|-.++ +.-+|...+.+-+
T Consensus 280 ---~ftPIL-nppQ~AILGVGAi~~p~~f~gas~~~l~~i~i~kvMtLTlTyDHRVIdGA~sg~FL~~ik~lL 348 (1228)
T PRK12270 280 ---HSVPRL-MKGQGAIIGVGAMEYPAEFQGASEERLAELGISKVMTLTSTYDHRIIQGAESGEFLRTIHQLL 348 (1228)
T ss_pred ---ceeeee-cCCceEEEeccccccCceecCcccccccccceeeeEEeeeeccceeeccHhHHHHHHHHHHHH
Confidence 111221 34444 44443332 223578899999999 3444555544443
No 40
>PRK14628 hypothetical protein; Provisional
Probab=39.40 E-value=93 Score=23.69 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=32.7
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHhh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAAS 211 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a~ 211 (229)
+.|++ -+..=-.++..|++++ |.+.|.|.+-.++++-.+.+.
T Consensus 56 VkV~~--nG~~ei~~I~Idp~~l~D~E~LeDLIiaA~NdA~~ka~ 98 (118)
T PRK14628 56 VRIVA--TCDRRVKDIEIDEDLKEDFETLKDLLIAGMNEVMEKIE 98 (118)
T ss_pred EEEEE--EcCceEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44444 4666678899999999 999999999999988665543
No 41
>PRK14623 hypothetical protein; Provisional
Probab=32.47 E-value=1.2e+02 Score=22.53 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=31.0
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..=-+++..|++++ |.+.|.|.+-.++.+-.+.+
T Consensus 38 VkVt~--~G~~~i~~i~Idp~~l~D~E~LeDLI~aAvn~A~~k~ 79 (106)
T PRK14623 38 LKVTV--TANREIKSISIDDELLEDKEQLEDYLVLTLNKAIEKA 79 (106)
T ss_pred EEEEE--EcCccEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 44444 5556667888899999 99999999999988765544
No 42
>PF02599 CsrA: Global regulator protein family; InterPro: IPR003751 The RNA-binding protein CsrA (carbon storage regulator) is a new kind of global regulator, which facilitates specific mRNA decay []. CsrA is entirely contained within a globular complex of approximately 18 CsrA-H6 subunits and a single RNA, CsrB. CsrA binds to the CsrB RNA molecule to form the Csr regulatory system which has a strong negative regulatory effect on glycogen biosynthesis, glyconeogenesis and glycogen catabolism and a positive regulatory effect on glycolysis [].; GO: 0003723 RNA binding, 0006109 regulation of carbohydrate metabolic process, 0006402 mRNA catabolic process; PDB: 1Y00_B 2JPP_A 1T3O_A 1VPZ_A.
Probab=30.20 E-value=80 Score=20.58 Aligned_cols=31 Identities=10% Similarity=0.222 Sum_probs=22.8
Q ss_pred EEEEEEEe-CCeEEEEEEecCCCC-ChhHHHHH
Q 047091 168 LVVTIVSY-MGNLRVSLGAEEGFI-DSPKLKSC 198 (229)
Q Consensus 168 l~v~v~SY-~g~l~l~v~aD~~~~-d~~~l~~~ 198 (229)
..|++++. +|++++|+.|.+++. +=+++.+.
T Consensus 18 I~I~Vl~i~~~~VklgI~AP~~v~I~R~Ei~~~ 50 (54)
T PF02599_consen 18 IEITVLEISGGQVKLGIDAPKEVPIYREEIYER 50 (54)
T ss_dssp EEEEEEEEETTEEEEEEEECTTSEEEEHHHHHH
T ss_pred EEEEEEEEcCCEEEEEEECCCCCEEeHHHHHHH
Confidence 55666665 899999999999977 65555443
No 43
>PRK14621 hypothetical protein; Provisional
Probab=27.58 E-value=1.8e+02 Score=21.82 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=28.1
Q ss_pred eCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHh
Q 047091 175 YMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 175 Y~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a 210 (229)
-+..=-+++..|++++ |.+.|.|.+-.++++-.+.+
T Consensus 46 ~G~~~i~~i~Idp~lldD~e~LeDLI~aA~NdA~~ka 82 (111)
T PRK14621 46 NGKQKLLSLAIDPEIMDDVEMVQDLVVAAVNSALEES 82 (111)
T ss_pred EcCceEEEEEECHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 4555567888899988 99999999988888765544
No 44
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.55 E-value=5.7e+02 Score=24.34 Aligned_cols=176 Identities=13% Similarity=0.095 Sum_probs=89.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCC-C
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAE-I 80 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~-~ 80 (229)
.|++.+++|+.+.-|.||..+ ..+...+|+.-|.... ....+.+|.+.-.+|...... .
T Consensus 18 ~t~~~~l~a~~~~~l~r~~~~-------~~~~~g~~~~~r~~~~-------------~~~~~~ig~f~n~~~lr~~~~~~ 77 (642)
T COG1020 18 LTLFMVLLAAFAALLSRWSGQ-------EDIVLGLPVAGRPLAL-------------PDVEQLIGLFANTLPLRLDISGR 77 (642)
T ss_pred CCHHHHHHHHHHHHHHHhCCC-------CCEEEeeeecCCCccc-------------cchHhhccchheeeeeeeccCCC
Confidence 689999999999988877443 2456678877775321 123333444444444433111 2
Q ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeee
Q 047091 81 QNPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFM 160 (229)
Q Consensus 81 ~dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~ 160 (229)
....+.+.++++.+.........-. ..+.+.+... .-.. .. -+..++++..++.......+..+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~h~~~p~-~~l~~~~~~~----~~~~--~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (642)
T COG1020 78 VTFAELLARLRELALGALEHQDLPG-EQLVERLGRE----RSLS--EP---LFDVVFVLQNGPTAGLKLPGLRVEELGIE 147 (642)
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCH-HHHHHHHhhh----ccCC--CC---ceeeEEEecCccccccccccccccccccc
Confidence 5688999999988777655433221 2222221111 0000 11 23455666666655443333333332111
Q ss_pred ecCCCc-eEEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh
Q 047091 161 VVGSPQ-SLVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMMLNAAS 211 (229)
Q Consensus 161 ~p~~~~-~l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~~~a~ 211 (229)
.++ .+-+.+.-+.+.+.+.+-......+.+. .+.+.+.+..+.....
T Consensus 148 ---~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 195 (642)
T COG1020 148 ---TPAAKLDLALAVVEGGLRLSFDYARELFDAET-IERELRHFLQLLAALA 195 (642)
T ss_pred ---CcccccceEEEEEeCceEEEEEeecccCCHHH-HHHHHHHHHHHHHHHH
Confidence 112 1334444455555555555555556565 4555555555544433
No 45
>PF14475 Mso1_Sec1_bdg: Sec1-binding region of Mso1
Probab=22.44 E-value=1.1e+02 Score=18.88 Aligned_cols=16 Identities=13% Similarity=0.110 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHhcC
Q 047091 10 GTIFLGTRLYMQAVNQ 25 (229)
Q Consensus 10 A~~agALr~yl~~~g~ 25 (229)
+.+..+||+|+.+++.
T Consensus 20 T~v~r~l~~yY~~k~~ 35 (41)
T PF14475_consen 20 THVHRVLRKYYTEKGR 35 (41)
T ss_pred hHHHHHHHHHHHHcCC
Confidence 4678999999999875
No 46
>PF01359 Transposase_1: Transposase (partial DDE domain); InterPro: IPR001888 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element. Transposases have been grouped into various families [, , ]. This family includes the mariner transposase []. More information about these proteins can be found at Protein of the Month: Transposase [].; PDB: 3HOT_B 3HOS_A 3K9K_B 3F2K_B 3K9J_B 2F7T_A.
Probab=22.16 E-value=2.9e+02 Score=19.36 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=29.8
Q ss_pred EEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMMLN 208 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~~ 208 (229)
|....+++.|-+...+.-+...|+.+.+++.+++-.++|.+
T Consensus 32 Ml~vwWd~~Gvi~~e~L~~~~TIts~~Y~~ql~~l~~~l~~ 72 (81)
T PF01359_consen 32 MLSVWWDAKGVIHYELLPPGKTITSEYYCQQLDKLKQALRE 72 (81)
T ss_dssp EEEEEEETTEEEEEEEESTT---SHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeccCcEeeeeCCCCccccHHHHHHHHHHHHHHHHH
Confidence 44456899999999999999999988888887755555554
No 47
>PRK14625 hypothetical protein; Provisional
Probab=22.00 E-value=2.6e+02 Score=20.95 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=29.8
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..=.++|..|++++ |.+.|.|.+-.++++-.+.+
T Consensus 39 VkV~~--~G~~~v~~I~Idp~ll~~eD~e~LeDLI~aA~NdA~~k~ 82 (109)
T PRK14625 39 VTVTL--MGNGELVRVLMDESLVQPGEGEVIADLIVAAHADAKKKL 82 (109)
T ss_pred EEEEE--ecCceEEEEEECHHHcCCccHHHHHHHHHHHHHHHHHHH
Confidence 44444 5666667888899988 67888888888888765444
No 48
>PF08727 P3A: Poliovirus 3A protein like; InterPro: IPR014838 The 3A protein is found in positive-strand RNA viruses. It is a critical component of the poliovirus replication complex, and is also an inhibitor of host cell ER to Golgi transport. ; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0017111 nucleoside-triphosphatase activity; PDB: 1NG7_A.
Probab=21.96 E-value=1.2e+02 Score=20.11 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC
Q 047091 4 LNDVITGTIFLGTRLYMQAVNQ 25 (229)
Q Consensus 4 vNDVlLA~~agALr~yl~~~g~ 25 (229)
|+|.|-++=+.-++.|+++.|.
T Consensus 20 I~DLL~SV~~~eV~~YC~~~GW 41 (57)
T PF08727_consen 20 IADLLRSVDSPEVREYCEEQGW 41 (57)
T ss_dssp THHHHHHH--HHHHHHHHHHT-
T ss_pred HHHHHHhcCCHHHHHHHHHCCc
Confidence 7899999999999999999997
No 49
>COG0718 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.71 E-value=2.2e+02 Score=21.25 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=29.1
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..=..+|..|++++ |.+.|.|.+..++.+-.+.+
T Consensus 42 VtV~~--~G~~ev~~v~Idp~l~dpeD~E~LeDLi~aA~ndA~~kv 85 (105)
T COG0718 42 VTVTI--NGKGEVKSVEIDPSLLDPEDKEMLEDLILAAFNDAKKKV 85 (105)
T ss_pred EEEEE--eCCCcEEEEEeCHHHcCcccHHHHHHHHHHHHHHHHHHH
Confidence 44444 4444456788899988 47888898888888766554
No 50
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.62 E-value=70 Score=29.72 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=46.0
Q ss_pred eCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHhhcCCCCccccCCCCCCC
Q 047091 175 YMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAASATPSNANFLNGHNTSS 227 (229)
Q Consensus 175 Y~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a~~~~~~~~~~~~~~~~~ 227 (229)
|+--+.++..+|.-.+ +|+...+.-..+++...+.|+-++..-.++|-|-||.
T Consensus 253 yaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT 306 (412)
T COG0304 253 YAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTST 306 (412)
T ss_pred EEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccC
Confidence 7778889999999988 8877777777888888888998888999999999985
No 51
>PRK14622 hypothetical protein; Provisional
Probab=21.24 E-value=2.9e+02 Score=20.37 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=26.7
Q ss_pred eCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 175 YMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 175 Y~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
-+..=..++..|++++ |.+.|.|.+-.++++-.+.+
T Consensus 43 nG~~~v~~i~Idp~~l~~ed~e~LeDLI~aA~N~A~~k~ 81 (103)
T PRK14622 43 NGKCEVTRLTVDPKAVDPNDKAMLEDLVTAAVNAAVEKA 81 (103)
T ss_pred EcCceEEEEEECHHHcCcccHHHHHHHHHHHHHHHHHHH
Confidence 4556667778888876 68888888888888765444
No 52
>PRK14624 hypothetical protein; Provisional
Probab=21.21 E-value=2.5e+02 Score=21.24 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=27.7
Q ss_pred eCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 175 YMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 175 Y~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
-+..-..++..|++++ |++.|.|.+-.++++-.+.+
T Consensus 48 nG~~~i~~i~Idp~lld~eD~E~LeDLI~aAvNdA~~k~ 86 (115)
T PRK14624 48 TGEGQITNVFINKQLFDADDNKMLEDLVMAATNDALKKA 86 (115)
T ss_pred EcCccEEEEEECHHHcCcccHHHHHHHHHHHHHHHHHHH
Confidence 5666667888899987 78889998888888765444
No 53
>PRK00153 hypothetical protein; Validated
Probab=20.95 E-value=2.8e+02 Score=20.17 Aligned_cols=42 Identities=21% Similarity=0.190 Sum_probs=28.7
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHhh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAAS 211 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a~ 211 (229)
+.|++ -++.-..++.-|++++ |++.|.+.+-+++++-.+.+.
T Consensus 40 V~V~v--~G~~~v~~i~Id~~ll~~~d~e~LedlI~~A~n~A~~~~~ 84 (104)
T PRK00153 40 VKVTM--TGKKEVKRVKIDPSLVDPEDVEMLEDLILAAFNDALRKAE 84 (104)
T ss_pred EEEEE--ecCceEEEEEECHHHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 44444 3455556677777765 788899998888887665543
No 54
>PRK14627 hypothetical protein; Provisional
Probab=20.72 E-value=3e+02 Score=20.13 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=29.7
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..=-.++..|++++ |++.|.|.+..++++-.+.+
T Consensus 38 VkV~~--~G~~~v~~i~Idp~ll~~ed~e~LeDLI~aA~N~A~~k~ 81 (100)
T PRK14627 38 ITVKM--NGHREVQSITISPEVVDPDDVEMLQDLLLVAINDASRKA 81 (100)
T ss_pred EEEEE--EcCccEEEEEECHHHcCcccHHHHHHHHHHHHHHHHHHH
Confidence 44444 4666667888888887 68888888888888765544
No 55
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=20.30 E-value=2.9e+02 Score=22.70 Aligned_cols=33 Identities=12% Similarity=-0.006 Sum_probs=17.7
Q ss_pred eeEEEEEeeccCC--CCchhhhhhcCCCCCCCCCceEEEEEeeccc
Q 047091 31 HSTAVVLLNTRML--KSISSVKEMVKPDSKAPWGNHFAFLHVSVPQ 74 (229)
Q Consensus 31 ~l~~~vPvslR~~--~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~ 74 (229)
.+...+|++.|.. .+ .....|+.+..+.+.+.+
T Consensus 266 ~~~i~~~~~~R~~~~~~-----------~~~~vG~~~~~~P~~i~~ 300 (301)
T PF00668_consen 266 DVVIGTPVSGRPRSGPG-----------FSNTVGPFVNTLPVRIDV 300 (301)
T ss_dssp EEEEEEEE---TTTSCG-----------GGGS-SS--EEEEEEEE-
T ss_pred eeeecccccCCCCCCcC-----------hhhCeeeEeEEEEEEEEc
Confidence 5789999999987 32 234578777776666544
No 56
>PRK00587 hypothetical protein; Provisional
Probab=20.18 E-value=2.9e+02 Score=20.28 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=27.5
Q ss_pred eCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 175 YMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 175 Y~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
-+..=-.++..|++++ |++.|.|.+..++++-.+.+
T Consensus 42 nG~~~i~~i~Idp~lld~eD~E~LeDLI~aA~NdA~~k~ 80 (99)
T PRK00587 42 KGNLNIEKIEINKELIDPEDKETLQDMLREAINEAISIT 80 (99)
T ss_pred EcCccEEEEEECHHHcCCccHHHHHHHHHHHHHHHHHHH
Confidence 4555556777888877 78889999999988876655
Done!