Query 047091
Match_columns 229
No_of_seqs 110 out of 792
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 12:55:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047091.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047091hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q9j_A PAPA5, polyketide synth 98.7 6.5E-07 2.2E-11 79.4 17.6 177 2-207 235-414 (422)
2 3fot_A 15-O-acetyltransferase; 98.5 8E-07 2.7E-11 82.8 12.8 195 2-207 304-515 (519)
3 2jgp_A Tyrocidine synthetase 3 98.5 7.6E-06 2.6E-10 75.0 17.4 177 2-208 327-508 (520)
4 1l5a_A Amide synthase, VIBH; n 98.4 4.6E-05 1.6E-09 67.8 19.3 172 2-209 232-407 (436)
5 4hvm_A Tlmii; PSI-biology, mid 98.0 4.9E-05 1.7E-09 69.0 12.5 188 2-208 239-459 (493)
6 2xhg_A Tyrocidine synthetase A 97.8 0.0011 3.6E-08 59.4 17.6 183 2-209 258-456 (466)
7 2vsq_A Surfactin synthetase su 96.8 0.02 6.7E-07 58.4 14.4 171 2-208 252-430 (1304)
8 1nm8_A Carnitine O-acetyltrans 94.9 0.48 1.6E-05 44.7 13.7 93 119-222 514-608 (616)
9 1t1u_A Choline O-acetyltransfe 93.3 1.4 4.8E-05 41.7 13.6 121 81-211 482-614 (639)
10 2deb_A CPT II, carnitine O-pal 93.3 1.1 3.7E-05 42.7 12.8 74 131-215 578-651 (653)
11 1xl7_A COT, peroxisomal carnit 88.5 4.9 0.00017 37.8 12.0 69 132-211 538-608 (612)
12 3rqc_A Probable lipoamide acyl 78.6 21 0.00072 28.8 10.4 58 131-198 144-206 (224)
13 3l60_A Branched-chain alpha-ke 71.9 41 0.0014 27.7 10.7 18 2-19 65-82 (250)
14 2e1v_A Acyl transferase; BAHD 67.5 42 0.0014 29.6 10.5 60 2-76 273-332 (454)
15 1dpb_A Dihydrolipoyl-transacet 64.9 16 0.00056 29.9 6.7 67 131-208 157-236 (243)
16 2i9d_A Chloramphenicol acetylt 64.3 54 0.0018 26.3 11.3 18 2-19 50-67 (217)
17 2xr7_A Malonyltransferase; xen 64.1 25 0.00087 31.0 8.3 65 2-75 267-333 (453)
18 1scz_A E2, dihydrolipoamide su 63.5 21 0.00071 29.1 7.0 65 132-207 146-223 (233)
19 3b8k_A PDCE2;, dihydrolipoylly 62.1 62 0.0021 26.2 11.4 18 2-19 66-83 (239)
20 2bgh_A Vinorine synthase; VS, 61.2 41 0.0014 29.4 9.1 65 2-76 242-306 (421)
21 4g22_A Hydroxycinnamoyl-COA sh 55.5 50 0.0017 29.0 8.7 62 2-75 257-318 (439)
22 2ii3_A Lipoamide acyltransfera 55.2 38 0.0013 28.1 7.3 18 2-19 85-102 (262)
23 3mae_A 2-oxoisovalerate dehydr 45.2 36 0.0012 28.1 5.6 66 132-208 160-238 (256)
24 2rkv_A Trichothecene 3-O-acety 41.5 57 0.002 28.5 6.7 61 2-75 259-320 (451)
25 2q2k_A Hypothetical protein; p 41.2 18 0.00062 22.8 2.4 19 9-27 52-70 (70)
26 1f8v_D Mature capsid protein g 40.8 4.5 0.00015 23.7 -0.5 13 135-147 16-28 (40)
27 3f42_A Protein HP0035; helicob 32.9 75 0.0026 22.3 4.9 41 168-210 40-81 (99)
28 3cla_A Type III chloramphenico 30.9 58 0.002 25.9 4.5 18 2-19 48-65 (213)
29 1nov_D Nodamura virus coat pro 30.5 12 0.00042 22.3 0.3 11 136-146 17-27 (44)
30 1j8b_A YBAB; hypothetical prot 25.2 1.2E+02 0.0042 21.6 5.0 41 168-210 45-87 (112)
31 3qkb_A Uncharacterized protein 24.8 1.2E+02 0.0039 21.9 4.6 33 185-217 45-78 (111)
32 1vr7_A Adometdc, samdc, S-aden 23.6 2.3E+02 0.0079 21.1 7.0 37 168-204 77-113 (142)
33 1ybx_A Conserved hypothetical 23.5 1.5E+02 0.0051 22.3 5.3 41 168-210 78-121 (143)
34 2z2q_B Coat protein gamma; wil 21.5 23 0.00077 21.1 0.3 13 135-147 16-28 (44)
No 1
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.73 E-value=6.5e-07 Score=79.36 Aligned_cols=177 Identities=11% Similarity=0.018 Sum_probs=118.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|+|++++|+++.+|++| ...|. ..+...+|++.|..... +.+.....|-+|.+.-.||+.. ..
T Consensus 235 ~t~~~~l~aa~~~~l~r~-~~~~~----~~v~~g~~~~~R~~~~~--------~~~~~~~~~~vG~f~n~lp~~~---~~ 298 (422)
T 1q9j_A 235 LSLNAVVAAAILLTEWQL-RNTPH----VPIPYVYPVDLRFVLAP--------PVAPTEATNLLGAASYLAEIGP---NT 298 (422)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTCSS----CCEEEEEEEETTTTSSS--------CCCTTTBSCCEEEEEEEECCCS---SC
T ss_pred CCHHHHHHHHHHHHHHhc-ccCCC----ceEEEeeeeecccccCC--------CCChhhhhhhheeeeeeeeccC---CC
Confidence 589999999999999998 22222 25788899999975210 0000346677888887788865 25
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHH-HHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTA-KLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFM 160 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~-~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~ 160 (229)
++.+.|+++++++............. .+..++..+ . ..... .++++|.++......+.|.+++.+...
T Consensus 299 ~~~~~l~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~-~---------~~~pl-~~~~~n~~~~~~~~~~~~~~~~~~~~~ 367 (422)
T 1q9j_A 299 DIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGT-P---------PGLPP-LVFCTDATSFPTMRTPPGLEIEDIKGQ 367 (422)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHSCCBGGGGGGCC-C---------SSSCC-CEEEECCCCCCSCCCCTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCeeeecccchHHHhccc-C---------CCCCc-eEEEecCCcCCCCCCCCCceeEeeecc
Confidence 88999999999887764432110000 000011100 0 00011 688999988777777899999887765
Q ss_pred ec-CCCceEEEE-EEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 047091 161 VV-GSPQSLVVT-IVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMML 207 (229)
Q Consensus 161 ~p-~~~~~l~v~-v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~ 207 (229)
.+ ..+..+.+. +.+++|.+.+.+ .|++ -+.+.+.+.|...|+++.
T Consensus 368 ~~~~~~~~l~~~~~~~~~~~l~~~~-y~~~-~~~~~l~~~~~~~L~~l~ 414 (422)
T 1q9j_A 368 FYCSISVPLDLYSCAVYAGQLIIEH-HGHI-AEPGKSLEAIRSLLCTVP 414 (422)
T ss_dssp ECCBSSCCCCEEEEEEETTEEEEEE-ESSC-SSHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCceEEEEEeeCCeEEEEE-ecCc-cchHHHHHHHHHHHHHhh
Confidence 54 445556666 778999999999 9988 667778887777777664
No 2
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.53 E-value=8e-07 Score=82.76 Aligned_cols=195 Identities=12% Similarity=0.142 Sum_probs=104.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccccc-CCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTN-AEI 80 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~-~~~ 80 (229)
+|||.++.|+++.|++++....+ .++...+.+.+|||+|..-+.... ....|.....+.+.++.-.. ...
T Consensus 304 ~Tvt~~l~Aa~~~al~~~~~~~~-~~~~~~~~~~~pvnlR~~l~~~~~--------~n~~~~~~~~~~~~v~~i~~~~~~ 374 (519)
T 3fot_A 304 FTISHLTQAAIVLALLDHLKPND-LSDDEVFISPTSVDGRRWLREDIA--------SNFYAMCQTAAVVRIENLKSITVS 374 (519)
T ss_dssp CCHHHHHHHHHHHHHHHHC-----CCTTCCEEEEEEEECGGGBCHHHH--------TSCCSCCEEEEEEEECCGGGGCCC
T ss_pred eeHHHHHHHHHHHHHHhhcCCcc-cCCCccEEEEeeeeccccCCCccc--------ccccceeeeeeeeEecCccccccc
Confidence 59999999999999999754322 223336889999999975431100 01134444444444432110 000
Q ss_pred CCHHHHHHHH--HHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhcc---C-CCccEEEeccCCCcc---ceeec-
Q 047091 81 QNPLKFIRKA--QEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGS---L-NNSSIAITNMMGPVE---KMTLA- 150 (229)
Q Consensus 81 ~dp~~rL~~v--~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~---~-~~~~~~vSNvpGP~~---~l~l~- 150 (229)
.+..+-++++ .+..+..|+....+....++..+..+. -..+.+++... . ...+..+||+ |--+ |-.++
T Consensus 375 ~~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~-k~~~~~l~~~~~~~~~~~~tp~lSsl-G~vd~~lp~~y~~ 452 (519)
T 3fot_A 375 HKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRV-HNFEASYLHAKPIPFEGEANPLFISD-GINERFIPHEIKQ 452 (519)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHH-HHHHHHHHHHCSSCCCSBCCCEEEEE-EEGGGTSCSEEEE
T ss_pred cchhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHH-HHHHHHHhcccCCCCCCccCcccccC-Cccccccchhhcc
Confidence 1121222221 111222333222111111122222110 00122223322 1 2357889998 6544 44444
Q ss_pred ------CceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 047091 151 ------NHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMML 207 (229)
Q Consensus 151 ------G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~ 207 (229)
.-+|+++.+........+.+.++||.|+|+|+++-+...-|.+.+.+++++-.++|.
T Consensus 453 ~~~~~~~~~V~~~~~~~~~~~~~~~~~~~Tf~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L~ 515 (519)
T 3fot_A 453 TATGENVLSVESIDFVVNQSLPYLAIRLDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEFML 515 (519)
T ss_dssp TTTTEEEEEEEEEEEEECCCSSSCEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEEEEccccCCceEEEEEEECCEEEEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 257888877764323347899999999999999999998887777777777666665
No 3
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.46 E-value=7.6e-06 Score=74.96 Aligned_cols=177 Identities=10% Similarity=0.024 Sum_probs=116.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|+++|++|+++..|++|..+ ..+...+|++.|...+ .....|+.+..+.+.+.++. ..
T Consensus 327 ~T~~~~l~aa~a~~L~~~~~~-------~dv~~g~~~~gR~~~~-----------~~~~vG~f~n~lplr~~~~~---~~ 385 (520)
T 2jgp_A 327 TTLYMVLLAAYNVLLAKYAGQ-------EDIIVGTPITGRSHAD-----------LEPIVGMFVNTLAMRNKPQR---EK 385 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHHTC-------SCEEEEEEECCCCSGG-----------GTTCCSCCCEEEEEEECCCT---TS
T ss_pred CCHHHHHHHHHHHHHHHhcCC-------CCeEEEeccCCCCchh-----------hhccEEeeeeeeeEEecCCC---CC
Confidence 689999999999999999642 2578889999997643 13468998888888877754 25
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMV 161 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~ 161 (229)
++.+.|+++++.+........ +....+.+.++ +.. . .. .-..++++|+..+++.....+.|.++..+..-.
T Consensus 386 ~~~~~l~~v~~~~~~~~~h~~-~p~~~i~~~l~----~~r--~-~~-~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (520)
T 2jgp_A 386 TFSEFLQEVKQNALDAYGHQD-YPFEELVEKLA----IAR--D-LS-RNPLFDTVFTFQNSTEEVMTLPECTLAPFMTDE 456 (520)
T ss_dssp BHHHHHHHHHHHHHHHHHTCC-SCHHHHHHHTC----CCC--C-TT-SCSSCSEEEEEECCCCSCCCCSSEEEEECSSCS
T ss_pred CHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHhc----CCC--C-CC-CCCcEEEEEEEecCCCccccCCCceeEEeecCC
Confidence 788999999998877654322 21112222111 100 0 00 001346667766677667778888776542111
Q ss_pred c--CCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHHH
Q 047091 162 V--GSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMMLN 208 (229)
Q Consensus 162 p--~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~~ 208 (229)
. .....+.+.+..++|.+.+.+..|++..+ .+.+.+.|...++++.+
T Consensus 457 ~~~~~~~~L~l~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~lL~~l~~ 508 (520)
T 2jgp_A 457 TGQHAKFDLTFSATEEREEMTIGVEYSTSLFTRETMERFSRHFLTIAASIVQ 508 (520)
T ss_dssp SCSBCSSSEEEEEEECSSCEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeeEEEEEECCCeEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 12234888888899999999999999884 55566666666665543
No 4
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.35 E-value=4.6e-05 Score=67.77 Aligned_cols=172 Identities=11% Similarity=-0.054 Sum_probs=113.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++++++|+++..|++|.. + .+...+|++.|...+. ....|+.+..+.+.+.++. ..
T Consensus 232 ~t~~~~l~aa~~~~L~~~~g------~--dv~ig~~~~~R~~~~~-----------~~~vG~f~n~lplr~~~~~---~~ 289 (436)
T 1l5a_A 232 IGWPDALVALCALYLESAEP------D--APWLWLPFMNRWGSVA-----------ANVPGLMVNSLPLLRLSAQ---QT 289 (436)
T ss_dssp CCHHHHHHHHHHHHHHHHST------T--CCEEEEEECCCTTSGG-----------GGSCSCCCEEEEEECCCCT---TC
T ss_pred CCHHHHHHHHHHHHHHHhhC------C--ceEEeeecccCCChHH-----------hcCcceEEEEEEEEEecCC---CC
Confidence 58999999999999999932 1 4688899999976432 3458888888888877764 25
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeeee
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMV 161 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~ 161 (229)
+..+.|+++++.+........ +....+.+ .+ +.. ...-..++.+|+..+.+.. .++|.+++......
T Consensus 290 t~~~~l~~v~~~~~~~~~h~~-~~~~~i~~---~l-~~~------~~~~~lf~~~~~~~~~~~~--~~~~~~~~~~~~~~ 356 (436)
T 1l5a_A 290 SLGNYLKQSGQAIRSLYLHGR-YRIEQIEQ---DQ-GLN------AEQSYFMSPFINILPFESP--HFADCQTELKVLAS 356 (436)
T ss_dssp BHHHHHHHHHHHHHHHHHTTT-SCHHHHHH---HT-TCC------TTCCBCCCSEEEEECCCCC--CCTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhhhcC-CCHHHHHH---Hh-ccc------ccCCCccceEEEeeccCcc--ccCCCeeEEEecCC
Confidence 788999999998877654422 11111222 11 110 0000123445554444433 67888876544333
Q ss_pred cCCCceEEEEEE-EeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHHHH
Q 047091 162 VGSPQSLVVTIV-SYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMMLNA 209 (229)
Q Consensus 162 p~~~~~l~v~v~-SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~~~ 209 (229)
.... .+.+.+. .++|.+.+.+..|++..+ .+.+.+.|...++++.+.
T Consensus 357 ~~~~-~l~l~v~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~l~~~ 407 (436)
T 1l5a_A 357 GSAE-GINFTFRGSPQHELCLDITADLASYPQSHWQSHCERFPRFFEQLLAR 407 (436)
T ss_dssp CCCC-SEEEEEEECTTSCEEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-ceEEEEEecCCCcEEEEEEeChhhCCHHHHHHHHHHHHHHHHHHHhc
Confidence 2222 5777777 689999999999999883 666777777777777654
No 5
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.03 E-value=4.9e-05 Score=69.04 Aligned_cols=188 Identities=6% Similarity=-0.062 Sum_probs=99.7
Q ss_pred cc--hhHHHHHHHHHHHHHHHHH----hcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QT--LNDVITGTIFLGTRLYMQA----VNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~T--vNDVlLA~~agALr~yl~~----~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+| ++++++|+++.+|++|... .+.......+...+|++.|...+ .....|..+..+.+.+.++
T Consensus 239 vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~~-----------~~~~vG~f~n~lplr~~~~ 307 (493)
T 4hvm_A 239 GNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHLQ-----------LGSVVGPLTDRVVFGVDLT 307 (493)
T ss_dssp -CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHTT-----------CCSBCSCCEEEEEEEEECT
T ss_pred CCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCcc-----------hhcCeEeeeceeEEEEecC
Confidence 47 9999999999999999211 01001123689999999996543 2456888888877777664
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEE--------eccCCCccce
Q 047091 76 TNAEIQNPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAI--------TNMMGPVEKM 147 (229)
Q Consensus 76 ~~~~~~dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~v--------SNvpGP~~~l 147 (229)
. ....++.+.|+++++.+...... . +....+.++...+-..... ..... +.+.| +..+++...+
T Consensus 308 ~-~~~~t~~~~l~~v~~~~~~~~~h-~-~p~~~i~~~~~~l~~~~~~--~~~~l---f~~~~~~~~~~~~~~~~~~~~~~ 379 (493)
T 4hvm_A 308 G-LREPSFRDLMSRTQAGFLDAVVH-Y-LPYHDVVDLAVDLGVVTPP--RVAAR---WDVAVHLCRNAPSSSLTRGERTL 379 (493)
T ss_dssp T-CSSCBHHHHHHHHHHHHHHHHHT-C-CCHHHHHHHHHHTTSCBTT--BTTGG---GCEEECC----------------
T ss_pred C-CcCCCHHHHHHHHHHHHHHHHhh-c-CCHHHHHHHHhhhCcccCC--CCCcc---eeEEEEEEecCCccccccccccc
Confidence 2 00368999999999988887665 3 3223333322122000000 00011 12222 2233444556
Q ss_pred eecCceeeEeeee-----------------ecCCCceEEEEEEEeCCeEEEEEEecCCCC--ChhHHHHHHHHHHHHHHH
Q 047091 148 TLANHAIKGLYFM-----------------VVGSPQSLVVTIVSYMGNLRVSLGAEEGFI--DSPKLKSCIENAFEMMLN 208 (229)
Q Consensus 148 ~l~G~~v~~~~~~-----------------~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~--d~~~l~~~~~~~l~el~~ 208 (229)
...|.++..+..- .......+.+.+..++|.+.+.+..+++.. ..+.+.+.|.+.++++.+
T Consensus 380 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~~~~l~~~~~y~~~l~~~~i~~l~~~~~~~L~~~~~ 459 (493)
T 4hvm_A 380 AELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGELGEDMVIVLDQRRTHPAGGGSALLDGLDAAMAQAVA 459 (493)
T ss_dssp ----CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEETTEEEEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred cCCCceeeeccccccccccccccccccccccccCCcceEEEEEEeCCeEEEEEEEccccCHHHHHHHHHHHHHHHHHHHh
Confidence 6677777654330 001122277888889999999999999966 466777777777777654
No 6
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.84 E-value=0.0011 Score=59.40 Aligned_cols=183 Identities=9% Similarity=-0.039 Sum_probs=104.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccccCCCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAEIQ 81 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~~~ 81 (229)
+|++++++|+++.+|++|..+ ..+...+|++.|..... ..+.....|+.+..+.+.+.++. ..
T Consensus 258 ~t~~~~llaa~~~~l~~~~~~-------~dv~ig~~~~gR~~~~~-------~~~~~~~vG~f~n~lplr~~~~~---~~ 320 (466)
T 2xhg_A 258 TEINDLLLAALGLAFAEWSKL-------AQIVIHLEGHGREDIIE-------QANVARTVGWFTSQYPVLLDLKQ---TA 320 (466)
T ss_dssp CCHHHHHHHHHHHHHHHHHCC-------SEEEEEEEECCCCSCST-------TCCCTTCCSCCCEEEEEEEECSC---CC
T ss_pred CCHHHHHHHHHHHHHHHHhCC-------CceEEEecCCCCCcccc-------CCCccccccceeeeccEEEecCC---CC
Confidence 589999999999999999532 25788899999975310 00123567888887777777653 26
Q ss_pred CHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEee---
Q 047091 82 NPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLY--- 158 (229)
Q Consensus 82 dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~--- 158 (229)
++.+.|++|++.+...++..-+ +.+.+.+... ... .-........+.|+............|..+..+-
T Consensus 321 ~~~~~l~~v~~~~~~~~~~~~~---~~~~~~l~~~----~~~-~~~~~~~~p~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 392 (466)
T 2xhg_A 321 PLSDYIKLTKENMRKIPRKGIG---YDILKHVTLP----ENR-GSLSFRVQPEVTFNYLGQFDADMRTELFTRSPYSGGN 392 (466)
T ss_dssp SHHHHHHHHHHHHHHSGGGGTH---HHHHHHTSCG----GGS-TTCCCCCCCSEEEEEEEECCTTCSSSSCEECTTCTTC
T ss_pred CHHHHHHHHHHHHHhCccCCcc---cceeeecccc----ccc-ccccccCCCeEEEeecCcccccccCCceecccccCcc
Confidence 8899999999998776433222 2122221110 000 0000011222444433222222222232221110
Q ss_pred --------eeec--CCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHHHH
Q 047091 159 --------FMVV--GSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMMLNA 209 (229)
Q Consensus 159 --------~~~p--~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~~~ 209 (229)
.+.+ .....+.+.+...+|.+.+.+..|++..+ .+.+.+.|...++++.+.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~L~~l~~~ 456 (466)
T 2xhg_A 393 TLGADGKNNLSPESEVYTALNITGLIEGGELVLTFSYSSEQYREESIQQLSQSYQKHLLAIIAH 456 (466)
T ss_dssp CSSTTCTTSBCTTSBCCCSEEEEEEEETTEEEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccccccCcceeEEEEEEEECCEEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0001 01233777777789999999999999883 556677777777666543
No 7
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=96.77 E-value=0.02 Score=58.42 Aligned_cols=171 Identities=13% Similarity=0.043 Sum_probs=103.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCC--CCchhhhhhcCCCCCCCCCceEEEEEeeccccccCC
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRML--KSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLTNAE 79 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~--~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~~ 79 (229)
+|+|+|++|+++..|++|..+ ..+...+|++.|.. .+. ....|..+..+.+.+.++.
T Consensus 252 ~T~~~vllaa~a~~L~r~tg~-------~dvv~G~pvsgR~~~~~~~-----------~~~vG~fvntlplr~~~~~--- 310 (1304)
T 2vsq_A 252 TTLSTALQAVWSVLISRYQQS-------GDLAFGTVVSGRPAEIKGV-----------EHMVGLFINVVPRRVKLSE--- 310 (1304)
T ss_dssp CCHHHHHHHHHHHHHHHHHTC-------SEEEEEEEECCCCTTSTTG-----------GGCCSSCCEEEEEEEECCT---
T ss_pred CCHHHHHHHHHHHHHHHhcCC-------CCEEEEEEeCCCCccchhh-----------hcccccceeEEEEEecCCC---
Confidence 689999999999999999532 25788999999975 221 2357888888777777653
Q ss_pred CCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHhhChHHHHHHHhccCCCccEEEeccCCCc---cceeecCceeeE
Q 047091 80 IQNPLKFIRKAQEIIQSKRSSFGAYLTAKLLETVKKFRGHETAAKFIHGSLNNSSIAITNMMGPV---EKMTLANHAIKG 156 (229)
Q Consensus 80 ~~dp~~rL~~v~~~~~~~K~s~~~~~~~~~~~l~~~l~~p~~~~~~~~~~~~~~~~~vSNvpGP~---~~l~l~G~~v~~ 156 (229)
..+..+.|+++++.+........ +... .+...+ + ....| ...+++.|.|-.. ......|.++..
T Consensus 311 ~~s~~~ll~~v~~~~~~a~~hq~-~p~~---~i~~~l-~-------~~~lf-~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 377 (1304)
T 2vsq_A 311 GITFNGLLKRLQEQSLQSEPHQY-VPLY---DIQSQA-D-------QPKLI-DHIIVFENYPLQDAKNEESSENGFDMVD 377 (1304)
T ss_dssp TCBHHHHHHHHHHHHHHHGGGTT-SCHH---HHHHSS-S-------CSSSC-CCEEEECSSCHHHHSCCCHHHHSEEEEE
T ss_pred CCcHHHHHHHHHHHHHHhhhccc-CCHH---HHHHHh-C-------CCccc-ceeEEEeecccccccccccccCCceeEe
Confidence 26788899999998776654322 2111 111111 1 01122 2234555654221 112234555544
Q ss_pred eeeeecCCCceEEEEEEEeCCeEEEEEEecCCCCC---hhHHHHHHHHHHHHHHH
Q 047091 157 LYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFID---SPKLKSCIENAFEMMLN 208 (229)
Q Consensus 157 ~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d---~~~l~~~~~~~l~el~~ 208 (229)
+... ......+.+.+ ..++.+.+.+..|++..| .+.+.+.|..-++++.+
T Consensus 378 ~~~~-~~~~~dL~l~~-~~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~ 430 (1304)
T 2vsq_A 378 VHVF-EKSNYDLNLMA-SPGDEMLIKLAYNENVFDEAFILRLKSQLLTAIQQLIQ 430 (1304)
T ss_dssp EEEC-CCCCSSEEEEE-ECSSSCEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eecc-cccccCeEEEE-ecCCcEEEEEEECCccCCHHHHHHHHHHHHHHHHHhcc
Confidence 3222 11122355554 357889999999999884 45566666666666543
No 8
>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*
Probab=94.85 E-value=0.48 Score=44.74 Aligned_cols=93 Identities=13% Similarity=0.129 Sum_probs=62.8
Q ss_pred hHHHHHHHhccCCCccEEEeccCCCccceeecCceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCC--ChhHHH
Q 047091 119 HETAAKFIHGSLNNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFI--DSPKLK 196 (229)
Q Consensus 119 p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~--d~~~l~ 196 (229)
|.......+....+.-+.-|++|++. ...++|+|..|.|.+|+-.=-.+.+.|+|++=+... |.++|.
T Consensus 514 P~lF~dp~~~~~~~~~LSTSq~~~~~----------~~~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~ 583 (616)
T 1nm8_A 514 PDIFMDTSYAIAMHFHLSTSQVPAKT----------DCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLA 583 (616)
T ss_dssp CHHHHSHHHHHHTCCSEEEEECCCSS----------SCEEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHH
T ss_pred cccccCchhhhcCCCEEeecCCCCCc----------cCceEEecCCCCeeEEEEEecCCeEEEEEEeCCCCccccHHHHH
Confidence 44333333333345568889998864 345678886678888887778999999999865543 999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccCC
Q 047091 197 SCIENAFEMMLNAASATPSNANFLNG 222 (229)
Q Consensus 197 ~~~~~~l~el~~~a~~~~~~~~~~~~ 222 (229)
++++++|.++.+.....+. ++.+++
T Consensus 584 ~~L~~al~dm~~ll~~~~~-~~l~~~ 608 (616)
T 1nm8_A 584 HYLEKALLDMRALLQSHPR-AKLISE 608 (616)
T ss_dssp HHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHHhccch-hccCcH
Confidence 9999999999998774432 444443
No 9
>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*
Probab=93.34 E-value=1.4 Score=41.74 Aligned_cols=121 Identities=8% Similarity=-0.062 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHHhhhc------cchhhHHHHH-HHHHHhh---ChHHHHHHHhccCCCccEEEeccCCCccceeec
Q 047091 81 QNPLKFIRKAQEIIQSKRSS------FGAYLTAKLL-ETVKKFR---GHETAAKFIHGSLNNSSIAITNMMGPVEKMTLA 150 (229)
Q Consensus 81 ~dp~~rL~~v~~~~~~~K~s------~~~~~~~~~~-~l~~~l~---~p~~~~~~~~~~~~~~~~~vSNvpGP~~~l~l~ 150 (229)
.+..|+++..++..++.++- ...+-.+++. ..+..-. .|.......+....+.-+.-|++|++.
T Consensus 482 ~~~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~dp~~~~~~~~~LSTSq~~~~~------ 555 (639)
T 1t1u_A 482 MPASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTM------ 555 (639)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTTCSCCHHHHSHHHHHHTCCSEEEEECCCSS------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhcCCCCcccccCchhhhhCCCEEEecCCCCCc------
Confidence 45567777777665553321 1222222111 2222210 144333333333345568889998874
Q ss_pred CceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCC--ChhHHHHHHHHHHHHHHHHhh
Q 047091 151 NHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFI--DSPKLKSCIENAFEMMLNAAS 211 (229)
Q Consensus 151 G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~--d~~~l~~~~~~~l~el~~~a~ 211 (229)
...++|+|..+.|.+|+-.=-.+.+.|+|++=.... |.++|.++++++|.++.+...
T Consensus 556 ----~~~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 614 (639)
T 1t1u_A 556 ----EMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 614 (639)
T ss_dssp ----SEEEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ----cccceEcccCCCceEEEEEEcCCeEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 234578886778888887778999999999866543 999999999999999998765
No 10
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=93.32 E-value=1.1 Score=42.66 Aligned_cols=74 Identities=9% Similarity=0.159 Sum_probs=58.8
Q ss_pred CCccEEEeccCCCccceeecCceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHHHHHHHh
Q 047091 131 NNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 131 ~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~el~~~a 210 (229)
.+.-+.-|++|++. ...++|+|..|.|.+|+-.=-.+.+.|+|++=+ ..|.++|.++++++|.++.+..
T Consensus 578 ~~~~LSTS~~~~~~----------~~~~gfgPv~~dGyGi~Y~i~~~~i~f~iSs~~-~t~~~~F~~~L~~al~dm~~ll 646 (653)
T 2deb_A 578 NHNILSTSTLNSPA----------VSLGGFAPVVPDGFGIAYAVHDDWIGCNVSSYS-GRNAREFLHCVQKCLEDIFDAL 646 (653)
T ss_dssp TSCSEEEEECCCTT----------EEEEECCCSSTTCEEEEEEECSSCEEEEEEECT-TSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeecCCCCCc----------cccceeeccCCCceEEEEEecCCeEEEEEEeCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 34567888998875 255677886678888887778999999999865 2399999999999999999987
Q ss_pred hcCCC
Q 047091 211 SATPS 215 (229)
Q Consensus 211 ~~~~~ 215 (229)
..++.
T Consensus 647 ~~~~~ 651 (653)
T 2deb_A 647 EGKAI 651 (653)
T ss_dssp TTCCC
T ss_pred hccCC
Confidence 75543
No 11
>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A*
Probab=88.52 E-value=4.9 Score=37.80 Aligned_cols=69 Identities=16% Similarity=0.048 Sum_probs=53.8
Q ss_pred CccEEEeccCCCccceeecCceeeEeeeeecCCCceEEEEEEEeCCeEEEEEEecCCC-C-ChhHHHHHHHHHHHHHHHH
Q 047091 132 NSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSYMGNLRVSLGAEEGF-I-DSPKLKSCIENAFEMMLNA 209 (229)
Q Consensus 132 ~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~l~v~v~SY~g~l~l~v~aD~~~-~-d~~~l~~~~~~~l~el~~~ 209 (229)
+.-+.-|++ |+. ...++|+|..|.|.+|+-.=-.+.+.|+|++=... - |.++|.++++++|.++.+.
T Consensus 538 ~~~LSTS~~-~~~----------~~~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~l 606 (612)
T 1xl7_A 538 NFVLSTSLV-GYL----------RVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQL 606 (612)
T ss_dssp CCSEEEEEC-CSS----------SCCCBCCCSSTTCEEEEEEEETTEEEEEEEEETTCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEecCCC-CCC----------CCCcEEeccCCCeEEEEEEEcCCeEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 445777888 643 33457888677888888777899999999985543 3 8999999999999999886
Q ss_pred hh
Q 047091 210 AS 211 (229)
Q Consensus 210 a~ 211 (229)
..
T Consensus 607 l~ 608 (612)
T 1xl7_A 607 MN 608 (612)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 12
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=78.57 E-value=21 Score=28.84 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=33.5
Q ss_pred CCccEEEeccCCCccceeecCceeeEeeeeecCCCceEEEEEEEeC-----CeEEEEEEecCCCCChhHHHHH
Q 047091 131 NNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQSLVVTIVSYM-----GNLRVSLGAEEGFIDSPKLKSC 198 (229)
Q Consensus 131 ~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~l~v~v~SY~-----g~l~l~v~aD~~~~d~~~l~~~ 198 (229)
...+.++||++.-. +..+.|+. .+|+...+++=.+. ..+.+++++|-.++|....+++
T Consensus 144 ~ggtftISnlG~~G---------~~~~tpii-n~pq~aIl~vG~~~~~p~r~~m~lsls~DHRviDGa~aa~F 206 (224)
T 3rqc_A 144 QDSTFTITNVGTIG---------GIMSTPII-NYPEVAILGVHRILEREGRKYMYLSLSCDHRLIDGAVATRF 206 (224)
T ss_dssp CCCSEEEEECTTTC---------CSEEECCC-CTTBSEEEEECCCEEETTEEECCEEEEEETTTSCHHHHHHH
T ss_pred CCCEEEEEcCCcCC---------ccceEecc-CCCCceEEEecccEEECCceEEEEEEEeccceecHHHHHHH
Confidence 35588999996432 12333333 34564222322222 2477999999999976554443
No 13
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=71.93 E-value=41 Score=27.72 Aligned_cols=18 Identities=6% Similarity=-0.056 Sum_probs=16.4
Q ss_pred cchhHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLY 19 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~y 19 (229)
.|+||.++-+++.||++|
T Consensus 65 ls~~~~iikAva~AL~~~ 82 (250)
T 3l60_A 65 ITPFALTLRLLVIALKHN 82 (250)
T ss_dssp CCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 389999999999999986
No 14
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=67.53 E-value=42 Score=29.57 Aligned_cols=60 Identities=12% Similarity=-0.061 Sum_probs=43.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLT 76 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~ 76 (229)
+|-+|++.|.+-.++-+-. +++ ..+...+||+|..-+. +-+..-.||-+.......+.++
T Consensus 273 ~St~d~l~A~lWr~~~~Ar------~~~-~~~l~~~vd~R~rl~p--------plP~~Y~GN~~~~~~~~~~~~e 332 (454)
T 2e1v_A 273 VSSFTVACAYIWSCIAKSR------NDK-LQLFGFPIDRRARMKP--------PIPTAYFGNCVGGCAAIAKTNL 332 (454)
T ss_dssp CCHHHHHHHHHHHHHHHHH------CCS-EEEEEEEEECGGGSSS--------CCCTTBCSCCEEEEEEEEEGGG
T ss_pred ccHHHHHHHHHHHHHhhhc------CCC-ceEEEEEecchhccCC--------CCCcccccceeeeEEeecchhh
Confidence 6889999998877776643 232 6788899999985321 0134568999988888887763
No 15
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=64.89 E-value=16 Score=29.93 Aligned_cols=67 Identities=16% Similarity=0.150 Sum_probs=37.9
Q ss_pred CCccEEEeccCCCccceeecCceeeEeeeeecCCCce--EEEEEEEe-----CCe------EEEEEEecCCCCChhHHHH
Q 047091 131 NNSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQS--LVVTIVSY-----MGN------LRVSLGAEEGFIDSPKLKS 197 (229)
Q Consensus 131 ~~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~--l~v~v~SY-----~g~------l~l~v~aD~~~~d~~~l~~ 197 (229)
...+.+|||++.-. +..+.|+. .+||+ ++++-+.. +|+ +.+++++|-.++|....++
T Consensus 157 ~ggtftISnlG~~g---------~~~~tpIi-n~pq~aIl~vG~~~~~pv~~~g~i~~~~~m~lsls~DHRviDGa~aa~ 226 (243)
T 1dpb_A 157 QGACFTISSLGHIG---------GTAFTPIV-NAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAAAR 226 (243)
T ss_dssp SCCSEEEEECTTTC---------CSCCCCCC-CTTSSEEEEECCCEEEEEECSSSEEEEEEEEEEEEEETTTSCHHHHHH
T ss_pred CCCEEEEEcCCCCC---------ccceECcc-CCCCCeEEEccccEEEEEEECCeEEEEEEEEEEEEECcccccHHHHHH
Confidence 35688999997543 12222322 23443 33332111 443 7899999999997666555
Q ss_pred HHHHHHHHHHH
Q 047091 198 CIENAFEMMLN 208 (229)
Q Consensus 198 ~~~~~l~el~~ 208 (229)
|-+.|+++.+
T Consensus 227 -Fl~~lk~~le 236 (243)
T 1dpb_A 227 -FTKRLGDLLA 236 (243)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHh
Confidence 4444555443
No 16
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=64.26 E-value=54 Score=26.26 Aligned_cols=18 Identities=6% Similarity=-0.136 Sum_probs=16.4
Q ss_pred cchhHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLY 19 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~y 19 (229)
.|+||.++-|++.||+++
T Consensus 50 ls~~~~~ikAv~~Al~~~ 67 (217)
T 2i9d_A 50 QSFFLHYLYAVLRAANEI 67 (217)
T ss_dssp CCHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 479999999999999986
No 17
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=64.12 E-value=25 Score=30.98 Aligned_cols=65 Identities=12% Similarity=-0.022 Sum_probs=44.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhc-C-CCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVN-Q-ESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g-~-~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+|-+|++.|.+=.++-+-..... . .++ ...+..++||+|..-+. +-+..-.||-+.......+.+
T Consensus 267 ~St~~~l~A~lW~~~~~Ar~~~~~~~~~~-~~~~l~~~vd~R~rl~p--------plP~~Y~GN~~~~~~~~~~~~ 333 (453)
T 2xr7_A 267 VTSFTVTCAYVWTCIIKSEAATGEEIDEN-GMEFFGCAADCRAQFNP--------PLPPSYFGNALVGYVARTRQV 333 (453)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCTT-SEEEEEEECCTTSCSSS--------CCCTTBCSCCCCEEEEEEEHH
T ss_pred ccHHHHHHHHHHHHHHHHhccccccCCCC-cceEEEEEecccccCCC--------CCCcccccceeeeeeeeeeHH
Confidence 68899999988777766543321 1 233 36788999999986421 013456899988887777775
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=63.47 E-value=21 Score=29.09 Aligned_cols=65 Identities=18% Similarity=0.150 Sum_probs=37.9
Q ss_pred CccEEEeccCCCccceeecCceeeEeeeeecCCCce--EEEEEEEe-----CC------eEEEEEEecCCCCChhHHHHH
Q 047091 132 NSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQS--LVVTIVSY-----MG------NLRVSLGAEEGFIDSPKLKSC 198 (229)
Q Consensus 132 ~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~--l~v~v~SY-----~g------~l~l~v~aD~~~~d~~~l~~~ 198 (229)
..+.+|||++.- |. ..+.|+. .+||+ ++++-+.. +| .+.+++++|-.++|....++
T Consensus 146 ggtftISnlG~~-------G~--~~~tpIi-n~pq~aIl~vG~~~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~- 214 (233)
T 1scz_A 146 GGNFTITNGGVF-------GS--LMSTPII-NPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVG- 214 (233)
T ss_dssp CCSEEEEEGGGG-------TC--CCCCCCC-CTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHH-
T ss_pred CCEEEEEeCCCC-------Cc--cceEccc-CCCCcEEEEccccEEEEEEECCEEEEEEEEEEEEEEcceeechHHHHH-
Confidence 457899999664 22 2222332 44554 55554333 44 37799999999997555544
Q ss_pred HHHHHHHHH
Q 047091 199 IENAFEMML 207 (229)
Q Consensus 199 ~~~~l~el~ 207 (229)
|-+.|+++.
T Consensus 215 Fl~~lk~~l 223 (233)
T 1scz_A 215 FLVTIKELL 223 (233)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333444433
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=62.08 E-value=62 Score=26.22 Aligned_cols=18 Identities=22% Similarity=0.139 Sum_probs=16.1
Q ss_pred cchhHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLY 19 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~y 19 (229)
.|+||.++-|++.||+++
T Consensus 66 ls~~~~~ikAv~~Al~~~ 83 (239)
T 3b8k_A 66 ISVNDFIIKASALACLKV 83 (239)
T ss_dssp CCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 479999999999999976
No 20
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=61.24 E-value=41 Score=29.40 Aligned_cols=65 Identities=15% Similarity=0.030 Sum_probs=43.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeeccccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQLT 76 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~ 76 (229)
+|-+|++.|.+=.++-+-.....+ ++ ...+..++||+|..-+. +-+..-.||-+.......+.+.
T Consensus 242 ~St~d~l~A~iW~~~~~Ar~~~~~-~~-~~~~l~~~vd~R~rl~p--------plP~~y~GN~~~~~~~~~~~~~ 306 (421)
T 2bgh_A 242 FSRVQLVVAYIWKHVIDVTRAKYG-AK-NKFVVVQAVNLRSRMNP--------PLPHYAMGNIATLLFAAVDAEW 306 (421)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSC-CC-SCEEEEEEEESGGGSSS--------CCCTTBCSCCEEEEEEEECTTC
T ss_pred CchhHhHHHHHHHHHHHHhcccCC-CC-CceEEEEEecCccccCC--------CCCCCccceEEEEEEEEecccc
Confidence 588999999877776655433221 22 25688899999985321 0134568999988888887764
No 21
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=55.54 E-value=50 Score=29.00 Aligned_cols=62 Identities=8% Similarity=-0.033 Sum_probs=42.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVNQESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+|-+|++.|.+=.++-+- ++..+++ ..+..++||.|..-+. +-+..-.||-+.......+.+
T Consensus 257 ~St~dal~A~iWr~~~rA---r~~~~~~-~~~l~~~vd~R~rl~P--------plp~~Y~GN~v~~~~~~~~~~ 318 (439)
T 4g22_A 257 YSSYEMLAGHVWRCACKA---RGLEVDQ-GTKLYIATDGRARLRP--------SLPPGYFGNVIFTATPIAIAG 318 (439)
T ss_dssp CCHHHHHHHHHHHHHHHH---TTCCTTC-EEEEEEEEECTTTSSS--------CCCTTBCSCCEEEECCEEEHH
T ss_pred ccHHHHHHHHHHHHHHHh---cCCCCCC-cEEEEEEEcccCCCCC--------CCCCCcccceeehhhcceEHH
Confidence 577899999877766553 3433443 6788899999986421 013456899988887777665
No 22
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=55.20 E-value=38 Score=28.07 Aligned_cols=18 Identities=11% Similarity=0.100 Sum_probs=16.2
Q ss_pred cchhHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLY 19 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~y 19 (229)
.|+||.++-|++.||++|
T Consensus 85 ls~~~~~ikAva~Al~~~ 102 (262)
T 2ii3_A 85 LSFMPFFLKAASLGLLQF 102 (262)
T ss_dssp CCSHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHhC
Confidence 478999999999999986
No 23
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=45.20 E-value=36 Score=28.11 Aligned_cols=66 Identities=11% Similarity=0.105 Sum_probs=37.9
Q ss_pred CccEEEeccCCCccceeecCceeeEeeeeecCCCce--EEEEEEE-----eCC------eEEEEEEecCCCCChhHHHHH
Q 047091 132 NSSIAITNMMGPVEKMTLANHAIKGLYFMVVGSPQS--LVVTIVS-----YMG------NLRVSLGAEEGFIDSPKLKSC 198 (229)
Q Consensus 132 ~~~~~vSNvpGP~~~l~l~G~~v~~~~~~~p~~~~~--l~v~v~S-----Y~g------~l~l~v~aD~~~~d~~~l~~~ 198 (229)
..+++|||++.- | +..+.|+. .+||+ ++++-+. -+| .+.+++++|-.++|....+++
T Consensus 160 ggTftISNlG~~-------G--~~~ftpII-nppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~F 229 (256)
T 3mae_A 160 GGTFTVNSTGSF-------G--SVQSMGII-NHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKF 229 (256)
T ss_dssp CCSEEEECGGGG-------T--CSEEECCC-CTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHH
T ss_pred CCEEEEecCCCC-------C--ccceEccc-CCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccccHHHHHHH
Confidence 458899999632 2 12333333 34443 4554332 145 367999999999976655443
Q ss_pred HHHHHHHHHH
Q 047091 199 IENAFEMMLN 208 (229)
Q Consensus 199 ~~~~l~el~~ 208 (229)
-+.|.++.+
T Consensus 230 -l~~lk~~Le 238 (256)
T 3mae_A 230 -LQAIKANVE 238 (256)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHh
Confidence 344555444
No 24
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=41.47 E-value=57 Score=28.53 Aligned_cols=61 Identities=8% Similarity=0.000 Sum_probs=42.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHhc-CCCCCceeEEEEEeeccCCCCchhhhhhcCCCCCCCCCceEEEEEeecccc
Q 047091 2 QTLNDVITGTIFLGTRLYMQAVN-QESTNLHSTAVVLLNTRMLKSISSVKEMVKPDSKAPWGNHFAFLHVSVPQL 75 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~yl~~~g-~~~~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~ 75 (229)
+|-+|++.|.+-.++-+-. .+ ..++ ...+..++||+|..-++ +..-.||-+.......+.+
T Consensus 259 ~St~d~l~A~~Wr~~~~Ar--~~~~~~~-~~~~l~~~vd~R~rl~l----------P~~y~GN~~~~~~~~~~~~ 320 (451)
T 2rkv_A 259 VSTDDALSAFIWKSASRVR--LERIDGS-APTEFCRAVDARPAMGV----------SNNYPGLLQNMTYHNSTIG 320 (451)
T ss_dssp CCHHHHHHHHHHHHHHHHH--TTTSCTT-SEEEEEEEEECHHHHTC----------CTTCCSCCEEEEEEEEEHH
T ss_pred ccHHHHHHHHHHHHHHHHH--hccCCCC-CceEEEEEecccccCCC----------CCCCcccceeeecccCcHH
Confidence 6889999998877776653 12 1233 36788999999975321 3456899988887776664
No 25
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=41.25 E-value=18 Score=22.85 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHhcCCC
Q 047091 9 TGTIFLGTRLYMQAVNQES 27 (229)
Q Consensus 9 LA~~agALr~yl~~~g~~~ 27 (229)
.|-+-.|||||.++-|+.|
T Consensus 52 tahirealrryieeigenp 70 (70)
T 2q2k_A 52 TAHIREALRRYIEEIGENP 70 (70)
T ss_dssp HHHHHHHHHHHHHHCC---
T ss_pred hHHHHHHHHHHHHHhccCC
Confidence 4667899999999988753
No 26
>1f8v_D Mature capsid protein gamma; nodavirus, coat protein, nucleoprotein, protein-RNA interactions, RNA duplex, RNA CAGE, gamma polypeptide; 3.00A {Pariacato virus} SCOP: b.121.4.4
Probab=40.80 E-value=4.5 Score=23.70 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=1.0
Q ss_pred EEEeccCCCccce
Q 047091 135 IAITNMMGPVEKM 147 (229)
Q Consensus 135 ~~vSNvpGP~~~l 147 (229)
...||||||..-.
T Consensus 16 ~~aS~iPGPVG~~ 28 (40)
T 1f8v_D 16 GTLSVIPGPVGTI 28 (40)
T ss_dssp CC-----------
T ss_pred HHHhcCCCchhHH
Confidence 4579999998654
No 27
>3f42_A Protein HP0035; helicobacter pylori unknown-function, structural genomics, P protein structure initiative; HET: MSE; 1.78A {Helicobacter pylori}
Probab=32.86 E-value=75 Score=22.30 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=31.0
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC-ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI-DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~-d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..--.+|..|++++ |++.|.|.+..++++-.+.+
T Consensus 40 V~Vt~--~G~~ev~~i~Idp~~~eD~E~LeDLI~aA~ndA~~k~ 81 (99)
T 3f42_A 40 VSVSF--NGLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAV 81 (99)
T ss_dssp EEEEE--ETTSCEEEEEECGGGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE--ecCceEEEEEECHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 44444 4555567888899999 99999999999988866544
No 28
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=30.88 E-value=58 Score=25.93 Aligned_cols=18 Identities=11% Similarity=0.052 Sum_probs=16.1
Q ss_pred cchhHHHHHHHHHHHHHH
Q 047091 2 QTLNDVITGTIFLGTRLY 19 (229)
Q Consensus 2 ~TvNDVlLA~~agALr~y 19 (229)
.|+||.++=|++.||+++
T Consensus 48 ls~~~~~ikAv~~Al~~~ 65 (213)
T 3cla_A 48 YKFYPVMIYLIAQAVNQF 65 (213)
T ss_dssp CCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhhC
Confidence 478999999999999976
No 29
>1nov_D Nodamura virus coat proteins; insect virus, icosahedral VIRU; 3.50A {Nodamura virus}
Probab=30.48 E-value=12 Score=22.27 Aligned_cols=11 Identities=27% Similarity=0.428 Sum_probs=8.6
Q ss_pred EEeccCCCccc
Q 047091 136 AITNMMGPVEK 146 (229)
Q Consensus 136 ~vSNvpGP~~~ 146 (229)
..||||||..-
T Consensus 17 ~aS~iPGPVG~ 27 (44)
T 1nov_D 17 FASTIPGPVGV 27 (44)
T ss_pred HHhcCCCchhH
Confidence 46999999754
No 30
>1j8b_A YBAB; hypothetical protein, structural genomics, structure function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae RD} SCOP: d.222.1.1 PDB: 1pug_A
Probab=25.24 E-value=1.2e+02 Score=21.59 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=29.5
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC--ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI--DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~--d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..--.+|..|++++ |.+.|.+.+..++++-.+.+
T Consensus 45 V~Vt~--~G~~ev~~i~Idp~~~~~d~E~LedlI~aA~ndA~~ka 87 (112)
T 1j8b_A 45 VKITI--NGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRA 87 (112)
T ss_dssp EEEEE--ETTCCEEEEEECGGGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE--ecCceEEEEEECHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 55555 3444456777799988 88999999999988865544
No 31
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=24.76 E-value=1.2e+02 Score=21.93 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=26.3
Q ss_pred ecCCCC-ChhHHHHHHHHHHHHHHHHhhcCCCCc
Q 047091 185 AEEGFI-DSPKLKSCIENAFEMMLNAASATPSNA 217 (229)
Q Consensus 185 aD~~~~-d~~~l~~~~~~~l~el~~~a~~~~~~~ 217 (229)
...+-+ .-+.+.+.+++++++|.+.|.+...+|
T Consensus 45 l~s~eidey~~~~ear~eA~~rM~e~A~~lGANA 78 (111)
T 3qkb_A 45 LASEDIDKYNMFDQLFDEAKQKLKKKADLLEGDG 78 (111)
T ss_dssp CCGGGTTCGGGHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred ecccccchhhhHHHHHHHHHHHHHHHHHHcCCCE
Confidence 333445 467899999999999999999888776
No 32
>1vr7_A Adometdc, samdc, S-adenosylmethionine decarboxylase proenzyme; TM0655, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.20A {Thermotoga maritima} SCOP: d.156.1.2 PDB: 1tlu_A 1tmi_A 3iwc_A* 3iwb_A* 3iwd_A* 3iwc_B* 3iwb_B* 3iwd_B*
Probab=23.60 E-value=2.3e+02 Score=21.09 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=30.5
Q ss_pred EEEEEEEeCCeEEEEEEecCCCCChhHHHHHHHHHHH
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFIDSPKLKSCIENAFE 204 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~d~~~l~~~~~~~l~ 204 (229)
++|..+-=-|...+-+.++.+.+||+...+++.++|.
T Consensus 77 IsIHTwPE~gyAavDVftCg~~~~P~~a~~~L~~~f~ 113 (142)
T 1vr7_A 77 LTIHTWPEYGYAAIDLFTCGEDVDPWKAFEHLKKALK 113 (142)
T ss_dssp EEEEEEGGGTEEEEEEEEESTTCCHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCeEEEEEEccCCCCCHHHHHHHHHHHhC
Confidence 6666666677888888898888899999999998885
No 33
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=23.54 E-value=1.5e+02 Score=22.28 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=28.6
Q ss_pred EEEEEEEeCCeEEEEEEecCCCC---ChhHHHHHHHHHHHHHHHHh
Q 047091 168 LVVTIVSYMGNLRVSLGAEEGFI---DSPKLKSCIENAFEMMLNAA 210 (229)
Q Consensus 168 l~v~v~SY~g~l~l~v~aD~~~~---d~~~l~~~~~~~l~el~~~a 210 (229)
+.|++ -+..--.+|..|++++ |.+.|.|.+..++++-.+.+
T Consensus 78 VkVtv--nG~~ev~~I~Idp~lldpeD~E~LeDLI~aAvNdA~~ka 121 (143)
T 1ybx_A 78 VTVVA--TGRKDIKEITIKPEVVDPDDVEMLQDLILAAVNEALRKA 121 (143)
T ss_dssp EEEEE--ETTCCEEEEEECGGGCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE--ecCceEEEEEECHHHcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 45554 3444455677788877 67889999998888866544
No 34
>2z2q_B Coat protein gamma; wild type, icosahedral virus, virus/RNA complex; 2.70A {Flock house virus} PDB: 2q26_B 3lob_D 2bbv_D
Probab=21.54 E-value=23 Score=21.07 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=9.5
Q ss_pred EEEeccCCCccce
Q 047091 135 IAITNMMGPVEKM 147 (229)
Q Consensus 135 ~~vSNvpGP~~~l 147 (229)
...|+||||..-.
T Consensus 16 ~a~S~iPGPVG~~ 28 (44)
T 2z2q_B 16 AAASNIPGPIGVA 28 (44)
T ss_pred HHHhcCCCchhHH
Confidence 3469999997543
Done!