Your job contains 1 sequence.
>047092
MEPLAPKIISPKSPNPIPVKLYPHRFWCSNRCKSKKWSMPMHSCASDNVKLAESSKLQLN
NRKDFIESIAKGFVGFAAAATALASICFDSPAFAESLTVAFPASRAPEVNTVQRTLVEAW
GLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAYSKISGMLSTLGDPFTRIISPKE
YQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDG
IDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPD
GHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPVILRLDVAQIWLDGD
ETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHK
TFGKGKIQSVTELHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTTDMLSSPKESLLKN
KSSVSSLEADSCIMVAEHELDVQESKGTAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047092
(510 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P73458 - symbol:prc "Carboxyl-terminal protease... 642 6.9e-63 1
UNIPROTKB|P75023 - symbol:ctpB "Carboxyl-terminal proteas... 596 5.1e-58 1
TAIR|locus:2129411 - symbol:AT4G17740 species:3702 "Arabi... 576 6.8e-56 1
TAIR|locus:2170443 - symbol:AT5G46390 species:3702 "Arabi... 487 1.8e-46 1
TIGR_CMR|CHY_0170 - symbol:CHY_0170 "carboxyl-terminal pr... 437 3.6e-41 1
TIGR_CMR|GSU_0969 - symbol:GSU_0969 "carboxy-terminal pro... 391 2.7e-36 1
TIGR_CMR|GSU_1772 - symbol:GSU_1772 "carboxy-terminal pro... 381 3.1e-35 1
TIGR_CMR|CBU_1538 - symbol:CBU_1538 "carboxyl-terminal pr... 375 1.3e-34 1
TIGR_CMR|DET_0364 - symbol:DET_0364 "carboxyl-terminal pr... 349 2.7e-34 2
TIGR_CMR|CJE_0618 - symbol:CJE_0618 "carboxyl-terminal pr... 365 1.5e-33 1
TIGR_CMR|SPO_3812 - symbol:SPO_3812 "carboxyl-terminal pr... 364 2.0e-33 1
TIGR_CMR|BA_5414 - symbol:BA_5414 "carboxyl-terminal prot... 355 1.8e-32 1
TIGR_CMR|SO_0047 - symbol:SO_0047 "carboxyl-terminal prot... 328 1.3e-29 1
TIGR_CMR|CPS_2810 - symbol:CPS_2810 "carboxyl-terminal pr... 268 3.1e-20 1
UNIPROTKB|P23865 - symbol:prc species:83333 "Escherichia ... 256 7.0e-19 1
UNIPROTKB|Q9KRY7 - symbol:VC_1496 "Tail-specific protease... 241 3.2e-17 1
TIGR_CMR|VC_1496 - symbol:VC_1496 "tail-specific protease... 241 3.2e-17 1
UNIPROTKB|Q4K8E7 - symbol:prc "Peptidase, S41 family" spe... 240 4.6e-17 1
TIGR_CMR|SO_2601 - symbol:SO_2601 "carboxyl-terminal prot... 228 9.4e-16 1
>UNIPROTKB|P73458 [details] [associations]
symbol:prc "Carboxyl-terminal protease" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IDA]
InterPro:IPR001478 InterPro:IPR004447 InterPro:IPR005151
Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106 SMART:SM00228
SMART:SM00245 GO:GO:0006508 GO:GO:0004252 GO:GO:0030288
SUPFAM:SSF50156 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0070008 eggNOG:COG0793 KO:K03797 TIGRFAMs:TIGR00225
Gene3D:3.30.750.44 InterPro:IPR024070 HSSP:O04073
HOGENOM:HOG000038766 PIR:S77395 RefSeq:NP_440818.1
RefSeq:YP_005650877.1 ProteinModelPortal:P73458 STRING:P73458
MEROPS:S41.010 GeneID:12254881 GeneID:954121 KEGG:syn:slr1751
KEGG:syy:SYNGTS_0924 PATRIC:23838874 OMA:DILGEIM Uniprot:P73458
Length = 423
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 142/350 (40%), Positives = 214/350 (61%)
Query: 118 EAWGLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAYSKISGMLSTLGDPFTRIIS 177
E W ++ T+VD TFN +DW + Q + + K+ + AY+ I ML L DP+TR +S
Sbjct: 46 EVWQIVNRTYVDGTFNGEDWVAVRQDYLTRDY--KNQEEAYTAIREMLEKLNDPYTRFMS 103
Query: 178 PKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGER 237
P E+QS RI + G L GVG+ I+ + T +VV++ +ED+PA AGI D + +I+G+
Sbjct: 104 PDEFQSMRIDTSGELTGVGIQITQDQDTKKIVVVAPIEDTPAYNAGILSKDVITKIDGKS 163
Query: 238 LDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHR 297
DG++ + A +RG+ GT V + + RE E + R I++ P+ +
Sbjct: 164 TDGMEVDDAVKLIRGKPGTSVVLTIE------REGQAIEYPLTRTLIEIHPVRAQV---- 213
Query: 298 TPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNP---VILRLDVAQ 354
D + + GY++L+ FS A+ +M + +LE E YI DLR+NP + +D+A+
Sbjct: 214 -EDINGARVGYIRLNQFSAQASEEMRQAVQKLEKENVVGYIFDLRSNPGGLLYSSVDIAR 272
Query: 355 IWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRA 414
IWLD + +V+ VDR G + + +++ PLVVLV+ GSASASEI++GAL DN RA
Sbjct: 273 IWLD-EGGIVSTVDRRGE-VEQQSANKRQLSNRPLVVLVDGGSASASEIVSGALQDNQRA 330
Query: 415 ILVGHKTFGKGKIQSVTELHDGSALFVTVAKYLSPALHDIDQVGITPDVQ 464
++VG KTFGKG +QSV EL DGS + VT+AKYL+P DI++ GI PDV+
Sbjct: 331 VIVGTKTFGKGLVQSVRELGDGSGMAVTIAKYLTPNGRDINKHGIDPDVE 380
>UNIPROTKB|P75023 [details] [associations]
symbol:ctpB "Carboxyl-terminal protease" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IDA] Pfam:PF00595
InterPro:IPR001478 InterPro:IPR004447 InterPro:IPR005151
Pfam:PF03572 PROSITE:PS50106 SMART:SM00228 SMART:SM00245
GO:GO:0006508 GO:GO:0004252 GO:GO:0030288 SUPFAM:SSF50156
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0070008
eggNOG:COG0793 KO:K03797 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 HSSP:O04073 HOGENOM:HOG000038766 PIR:S74579
RefSeq:NP_440051.1 RefSeq:YP_005650108.1 ProteinModelPortal:P75023
IntAct:P75023 STRING:P75023 MEROPS:S41.009 GeneID:12253942
GeneID:953350 KEGG:syn:slr0257 KEGG:syy:SYNGTS_0155 PATRIC:23837182
OMA:ALQDSPK Uniprot:P75023
Length = 462
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 134/357 (37%), Positives = 209/357 (58%)
Query: 110 NTVQRTLVEAWGLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAYSKISGMLSTLG 169
N+ + + E W L+ + FVD FNH +W SK Q+ + + +A+A Y +I +L L
Sbjct: 61 NSPKAVVDEVWQLVNQQFVDKDFNHSNWLSKRQELLGRNYQ-DNAEA-YRQIGRILKDLN 118
Query: 170 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDE 229
DP+TR +SP+E+ + G GVG+ + ++ R+ LVV+ + +PA +AGI GD
Sbjct: 119 DPYTRFLSPEEFAILSSQTSGEASGVGIRVLMDKRSSDLVVVDVMRGTPALKAGIRPGDR 178
Query: 230 LIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPI 289
++ ING+ + E A ++G GT +++++ K SG V + R I++ +
Sbjct: 179 IVRINGQPAALMSLEQATEAIQGEIGTELSLQLSRPK-----SGVFSVTLKRENIEIDSV 233
Query: 290 SRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNP---V 346
+ + +G L + GY++L FS +A M I EL Y+LDLR NP +
Sbjct: 234 TYNV----KEEGEL-RVGYIRLDEFSSHSAEQMEKAITELNKSRISGYVLDLRGNPGGLL 288
Query: 347 ILRLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAG 406
+ +D+A++WL+ E +V+ +DR G + +G ++T PLVVLVNE SASASEILAG
Sbjct: 289 LSSIDIARLWLNRGE-IVSTIDRRGGDRHFS-ANGRSLTDLPLVVLVNERSASASEILAG 346
Query: 407 ALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAKYLSPALHDIDQVGITPDV 463
AL + GRA +VG T+GKG +QSV L DGS L VT+A+Y P+ DI++ GI+PD+
Sbjct: 347 ALKEQGRATVVGTATYGKGTVQSVNTLSDGSGLAVTIARYYPPSGTDINRKGISPDI 403
>TAIR|locus:2129411 [details] [associations]
symbol:AT4G17740 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008236 "serine-type peptidase
activity" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=ISS] [GO:0009543 "chloroplast thylakoid
lumen" evidence=IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0006655 "phosphatidylglycerol biosynthetic
process" evidence=RCA] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006508 GO:GO:0004252 EMBL:AL161547
SUPFAM:SSF50156 GO:GO:0031977 GO:GO:0070008 EMBL:Z97344
eggNOG:COG0793 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 UniGene:At.4498 UniGene:At.54 EMBL:AY054171
EMBL:AF424602 EMBL:BT006343 IPI:IPI00533411 PIR:E71447
RefSeq:NP_193509.1 HSSP:O04073 ProteinModelPortal:O23614
IntAct:O23614 STRING:O23614 MEROPS:S41.002 PaxDb:O23614
PRIDE:O23614 EnsemblPlants:AT4G17740.1 GeneID:827495
KEGG:ath:AT4G17740 TAIR:At4g17740 HOGENOM:HOG000038766
InParanoid:O23614 OMA:DDSHTIG PhylomeDB:O23614 ProtClustDB:PLN00049
ArrayExpress:O23614 Genevestigator:O23614 Uniprot:O23614
Length = 515
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 141/356 (39%), Positives = 204/356 (57%)
Query: 117 VEAWGLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAYSKISGMLSTLGDPFTRII 176
+EAW I ++D TFN Q W + ++T + P+ + + Y I M++TL DPFTR +
Sbjct: 135 LEAWRTIDRAYIDKTFNGQSW-FRYRETALRNEPMNTREETYMAIKKMVATLDDPFTRFL 193
Query: 177 SPKEYQSFRIGSDGNLQGVGLFI-----SVEPRTGHLVVLSCVEDSPAARAGIHEGDELI 231
P +++S R G+ G + GVGL I S P G LVV+S PA RAGI GD +
Sbjct: 194 EPGKFKSLRSGTQGAVTGVGLSIGYPTASDGPPAG-LVVISAAPGGPANRAGILPGDVIQ 252
Query: 232 EINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISR 291
I+ + + AA L+G G+ V + + SG + TR + + R + ++P+
Sbjct: 253 GIDNTTTETLTIYDAAQMLQGPEGSAVELAIRSGPE------TRLLTLTRERVSVNPVKS 306
Query: 292 TIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNP---VIL 348
+ + K GY+KL+ F+Q A++ + I L ++++LDLR+N
Sbjct: 307 RLCELPGSGSNSPKIGYIKLTTFNQNASSAVREAIETLRGNNVNAFVLDLRDNSGGSFPE 366
Query: 349 RLDVAQIWLDGDETLVNAVDREGHTLPINMVDG-HAI-THDPLVVLVNEGSASASEILAG 406
+++A+ WLD +V D G I DG +AI T +PL VLVN+G+ASASEILAG
Sbjct: 367 GIEIAKFWLDKG-VIVYICDSRG-VRDIYDTDGSNAIATSEPLAVLVNKGTASASEILAG 424
Query: 407 ALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAKYLSPALHDIDQVGITPD 462
AL DN RA++ G T+GKGKIQSV EL DGS L VTVA+Y +PA DID+VG+TPD
Sbjct: 425 ALKDNKRALVYGEPTYGKGKIQSVFELSDGSGLAVTVARYETPAHTDIDKVGVTPD 480
>TAIR|locus:2170443 [details] [associations]
symbol:AT5G46390 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008236 "serine-type peptidase
activity" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=ISS] [GO:0009543 "chloroplast thylakoid
lumen" evidence=IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] Pfam:PF00595
InterPro:IPR001478 InterPro:IPR004447 InterPro:IPR005151
Pfam:PF03572 PROSITE:PS50106 SMART:SM00228 SMART:SM00245
EMBL:CP002688 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50156
GO:GO:0031977 GO:GO:0070008 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 IPI:IPI00528811 RefSeq:NP_974893.1
UniGene:At.9191 ProteinModelPortal:F4KHG6 SMR:F4KHG6 MEROPS:S41.A02
PRIDE:F4KHG6 EnsemblPlants:AT5G46390.2 GeneID:834682
KEGG:ath:AT5G46390 OMA:GIVEEAW Uniprot:F4KHG6
Length = 489
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 127/365 (34%), Positives = 204/365 (55%)
Query: 107 PEVNTVQRTLVEAWGLIRETFVDPTFNHQDWDSKL-QQTMVEIF--PLKSADAAYSKISG 163
P++ T + + EAW ++ F+D T +H W + Q+ +I P+KS A+ I
Sbjct: 114 PQLVTNEGIVEEAWEIVNGAFLD-TRSHS-WTPETWQKQKDDILASPIKSRSKAHEVIKN 171
Query: 164 MLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFI-SVEPRTGH--LVVLSCVEDSPAA 220
ML++LGD +TR +SP E+ S ++ G+G+ + V G+ L VL V DS A
Sbjct: 172 MLASLGDQYTRFLSPDEFSRM---SKYDITGIGINLREVSDGGGNVKLKVLGLVLDSAAD 228
Query: 221 RAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIP 280
AG+ +GDE++ +NG + G S + L+G + T V +KV GK G + + I
Sbjct: 229 IAGVKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVVLKVKHGK-CGP---VKSLKIQ 284
Query: 281 RGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILD 340
R +P+S + + +G ++ GY++L F+ A D+ + L +GA +++D
Sbjct: 285 RQVNAQTPVSYRL--EKVDNGTVS-VGYIRLKEFNALARKDLVIAMKRLLDKGASYFVMD 341
Query: 341 LRNNP---VILRLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGS 397
LR+N V ++ A+++LD +T++ R+ + D + PL+V+VN +
Sbjct: 342 LRDNLGGLVQAGIETAKLFLDEGDTVIYTAGRDPEAQKTVVSDKKPLITAPLIVMVNNRT 401
Query: 398 ASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAKYLSPALHDIDQV 457
ASASEI+A ALHDN +A+LVG +T+GKG IQSV EL DGS + VT+ KY++P DI+
Sbjct: 402 ASASEIVASALHDNCKAVLVGERTYGKGLIQSVYELRDGSGVVVTIGKYVTPNHMDINGG 461
Query: 458 GITPD 462
GI PD
Sbjct: 462 GIEPD 466
>TIGR_CMR|CHY_0170 [details] [associations]
symbol:CHY_0170 "carboxyl-terminal protease"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006508 "proteolysis" evidence=ISS] InterPro:IPR001478
InterPro:IPR004447 InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180
PROSITE:PS50106 SMART:SM00228 SMART:SM00245 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50156 GO:GO:0070008 eggNOG:COG0793 KO:K03797
TIGRFAMs:TIGR00225 Gene3D:3.30.750.44 InterPro:IPR024070
RefSeq:YP_359042.1 ProteinModelPortal:Q3AFP2 STRING:Q3AFP2
MEROPS:S41.004 GeneID:3727085 KEGG:chy:CHY_0170 PATRIC:21273525
HOGENOM:HOG000038764 OMA:ITTFNES BioCyc:CHYD246194:GJCN-171-MONOMER
Uniprot:Q3AFP2
Length = 377
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 112/318 (35%), Positives = 172/318 (54%)
Query: 150 PLKSADAAYSKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLV 209
P+ + I GM+ L DP++ + P++++ G GVGL +++E H+V
Sbjct: 51 PVSTEKLINGAIKGMVEGLDDPYSTYLDPEQFKHLNEQITGTFGGVGLIVTMEEN--HIV 108
Query: 210 VLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKV-HSGKDV 268
V+ + D+PAA+AGI GD ++ I+G G+D + A +RG GT V V + G
Sbjct: 109 VVKPIPDTPAAKAGIKAGDIIVNISGRDTKGMDLDTAVSLMRGPVGTRVEVGILRPG--- 165
Query: 269 GRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHE 328
E TR + R I + + ++ K GY+ LS F++ + + I +
Sbjct: 166 --EKETRMFTLVRENITIPTVESKMLDD--------KIGYIMLSQFTENSPQAVRKAIGD 215
Query: 329 LESEGAHSYILDLRNNP---VILRLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAIT 385
L+ +G I DLR+NP + +++A I++ +T+V VD + +
Sbjct: 216 LKKKGMKGLIFDLRDNPGGELKAAVEIADIFVPRGKTIVY-VDYRNQPDEEEKAEVPELG 274
Query: 386 HDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAK 445
P+VVLVN GSASASEI+AGAL D G A+LVG KTFGKG +QS+ L + L +TVA+
Sbjct: 275 I-PVVVLVNGGSASASEIVAGALKDWGVAVLVGEKTFGKGVVQSIFRLPGNAGLKLTVAR 333
Query: 446 YLSPALHDIDQVGITPDV 463
YL+P HDI++ GI PDV
Sbjct: 334 YLTPKKHDINKKGIMPDV 351
>TIGR_CMR|GSU_0969 [details] [associations]
symbol:GSU_0969 "carboxy-terminal processing protease"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0006508 GO:GO:0004252
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF50156
GO:GO:0070008 KO:K03797 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 MEROPS:S41.004 HOGENOM:HOG000038764
RefSeq:NP_952023.1 ProteinModelPortal:Q74EJ3 GeneID:2685693
KEGG:gsu:GSU0969 PATRIC:22024712 OMA:KEAGHYD
ProtClustDB:CLSK2391725 BioCyc:GSUL243231:GH27-986-MONOMER
Uniprot:Q74EJ3
Length = 450
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 117/318 (36%), Positives = 171/318 (53%)
Query: 161 ISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAA 220
I+GML++L DP + + P+ + + G+ G+G+ IS+ R G L V++ +ED+PA
Sbjct: 69 INGMLASL-DPHSSYLPPEPFTEMKTEISGSFGGLGIEISM--RDGKLTVVAPIEDTPAW 125
Query: 221 RAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIP 280
RAGI GD + +I+ G+ A ++RG GT V++ + R + + P
Sbjct: 126 RAGIQSGDHIWKIDDTPTRGLTITQAVKQMRGEKGTQVSLSIL------RNGNGKPLVFP 179
Query: 281 --RGYIKLSPI-SRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSY 337
R IK + SRT+ P G+ GYV++S F + D A + +L S+ S
Sbjct: 180 LVRDIIKTRSLKSRTLEP-----GY----GYVRISQFQERTGDDFAAALAKLRSDNGGSL 230
Query: 338 ---ILDLRNNPVILRLDVAQIWLDG---DETLVNA--VDREG--HTLP--INMVDGHAIT 385
+LDLRNNP L LD A + + G E L N V EG H + G
Sbjct: 231 KGLVLDLRNNPGGL-LDAA-VAVAGRFVGERLDNGLIVYTEGREHFAKRSYSATIGEKEP 288
Query: 386 HDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAK 445
PLVVL+N GSASASEI+AGAL D+GRA+++G +FGKG +Q+V L DG+ L +T A+
Sbjct: 289 RYPLVVLINGGSASASEIVAGALQDHGRAVIMGTTSFGKGSVQTVVPLKDGAGLKLTTAR 348
Query: 446 YLSPALHDIDQVGITPDV 463
Y +P I GI PD+
Sbjct: 349 YYTPKGRSIQARGIEPDI 366
>TIGR_CMR|GSU_1772 [details] [associations]
symbol:GSU_1772 "carboxy-terminal processing protease"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0006508 GO:GO:0004252
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF50156
GO:GO:0070008 KO:K03797 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 MEROPS:S41.004 HOGENOM:HOG000038764 OMA:KITTALY
RefSeq:NP_952822.1 ProteinModelPortal:Q74CA2 GeneID:2686575
KEGG:gsu:GSU1772 PATRIC:22026387 ProtClustDB:CLSK828543
BioCyc:GSUL243231:GH27-1775-MONOMER Uniprot:Q74CA2
Length = 443
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 104/316 (32%), Positives = 173/316 (54%)
Query: 158 YSKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDS 217
Y I+GML++L DP + + P Y+ +I + G+ G+G+ I++ + G L V+S +ED+
Sbjct: 68 YGAINGMLASL-DPHSSFMPPDMYKEMKIDTKGSFGGLGIEITI--KDGLLTVISPIEDT 124
Query: 218 PAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKV-HSGKDVGRESGTRE 276
PA +AGI GD++++I + A ++RG GT VT+ + G D +E
Sbjct: 125 PAFKAGIKAGDQILKIEDRFTKDMTIMDAVKRMRGPKGTKVTLTIMREGFDK-----PKE 179
Query: 277 VNIPRGYIKLSPISRTIIPHRTPD-GHLTKTGYVKLSAFSQTAAADMANTIHELESEGA- 334
+ R I++ + ++ D G+ GY++++ F + D+ + L+ E
Sbjct: 180 FTLVRDTIQVKSVR-----FKSMDQGY----GYIRIAQFQEKTDDDLVKALKALKEENGG 230
Query: 335 --HSYILDLRNNPVILRLD----VAQIWLDGDETLVNAVDREGHT-LPINMVDGHAITHD 387
+LDLRN+P L LD VA +++ D +V RE + + +
Sbjct: 231 DLRGLVLDLRNDPGGL-LDQAVKVADHFVE-DGLIVYTEGREKESRMQFTARKSGTEPNY 288
Query: 388 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAKYL 447
P+VVL+N GSASASEI+AGAL D+ RA+++G ++FGKG +Q++ L D S L +T A+Y
Sbjct: 289 PMVVLINSGSASASEIVAGALQDHKRAVVMGTQSFGKGSVQTIIPLSDESGLRLTTARYF 348
Query: 448 SPALHDIDQVGITPDV 463
+P+ I GITPD+
Sbjct: 349 TPSGRSIQAKGITPDI 364
>TIGR_CMR|CBU_1538 [details] [associations]
symbol:CBU_1538 "carboxyl-terminal protease family
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0006508 GO:GO:0004252
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF50156
GO:GO:0070008 KO:K03797 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 HSSP:O04073 MEROPS:S41.004 HOGENOM:HOG000038764
OMA:KITTALY RefSeq:NP_820521.1 ProteinModelPortal:Q83BH0
PRIDE:Q83BH0 GeneID:1209448 KEGG:cbu:CBU_1538 PATRIC:17931845
ProtClustDB:CLSK914853 BioCyc:CBUR227377:GJ7S-1519-MONOMER
Uniprot:Q83BH0
Length = 456
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 117/332 (35%), Positives = 180/332 (54%)
Query: 159 SKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSP 218
S ISGM++ L DP + + + + + G GVG+ ++V + G L V+S +EDSP
Sbjct: 78 SAISGMMANL-DPHSSYLDNNDLKELKTTVSGEFVGVGIELTVS-KDGLLKVISPLEDSP 135
Query: 219 AARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREV- 277
AARAGI D +++I+ + + + A +++G+ T TVK+ V R+S + +
Sbjct: 136 AARAGIQPNDYIVKIDDQLVQNMSLPEAVSRIKGKKET--TVKL----TVLRKSANKPLI 189
Query: 278 -NIPRGYIKLSPI-SRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHEL--ESEG 333
+I R I L + S+T+ P G+ GYV+++ F + + I +L ES+G
Sbjct: 190 FSIQREPIHLVSVKSKTLEP-----GY----GYVRITFFQGPVENQLRDAIDKLKKESQG 240
Query: 334 A-HSYILDLRNNPVILRLDV-AQI---WLDG------DETLVNAVDR-EGHTLPINMVDG 381
+LDLRNNP L LDV AQ+ +LD ++ +V R G + I G
Sbjct: 241 PLKGLVLDLRNNPGGL-LDVSAQVADSFLDASKMHRYNDLIVYTKGRVPGADIQIKATPG 299
Query: 382 HAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFV 441
I H P+VVL+N GSASASEI+AGAL D RAI++G +FGKG +Q+V + A+ +
Sbjct: 300 DLIPHTPMVVLINGGSASASEIVAGALQDYKRAIIMGTPSFGKGSVQTVLPIGKEDAIKL 359
Query: 442 TVAKYLSPALHDIDQVGITPDVQCTTDMLSSP 473
T A Y +PA +I GI P+V ++ P
Sbjct: 360 TTALYYTPAGREIQAKGIIPNVAVPEFSITPP 391
>TIGR_CMR|DET_0364 [details] [associations]
symbol:DET_0364 "carboxyl-terminal protease"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0006508 GO:GO:0004252
EMBL:CP000027 GenomeReviews:CP000027_GR SUPFAM:SSF50156
GO:GO:0070008 eggNOG:COG0793 KO:K03797 TIGRFAMs:TIGR00225
Gene3D:3.30.750.44 InterPro:IPR024070 HOGENOM:HOG000038764
RefSeq:YP_181110.1 ProteinModelPortal:Q3Z9I9 STRING:Q3Z9I9
GeneID:3230330 KEGG:det:DET0364 PATRIC:21607797 OMA:QIITTEY
ProtClustDB:CLSK837532 BioCyc:DETH243164:GJNF-364-MONOMER
Uniprot:Q3Z9I9
Length = 377
Score = 349 (127.9 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 97/323 (30%), Positives = 162/323 (50%)
Query: 146 VEIFPLKSADAAYSKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRT 205
VE + A A + I GM+ L DP + ++ ++YQS DG G+G + +E
Sbjct: 55 VEPDSIDQAALAEAAIKGMMDELDDPHSVYLNAEDYQSSLEYDDGKYVGIGATVQIEDEA 114
Query: 206 GHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSG 265
+VL + SPAA AGI GD L+E++G+ + G + +RG GT +T+ V
Sbjct: 115 ---IVLVPYDGSPAALAGIQAGDILLEVDGQSVAGFSLADLSPLVRGEKGTSLTLLVE-- 169
Query: 266 KDVGRESGTREV--NIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMA 323
R S + + + R I +S ++ ++ G + Y+++S FS+ ++
Sbjct: 170 ----RSSSDQPLLFEVTRDEILISSVTSEMM------GDIA---YIRISRFSERTDEELE 216
Query: 324 NTIHELESEGAHSYILDLRNNPVILRLDVAQIW--LDGDETLVNAVDREGHTLPINMVDG 381
+ L S A +LDLR NP L V + ++ VD EG++ ++V
Sbjct: 217 QVLKNLGS--AEGIVLDLRGNPGGLVSSVINVTSRFVSSGVVLTTVDNEGNSSEYSVVPK 274
Query: 382 HAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFV 441
T P+VVLV++ SAS SE L+GAL D GRA + G T+GKG + + + +++
Sbjct: 275 TVTTSLPMVVLVDQYSASGSEALSGALQDYGRATIAGKTTYGKGSVNRTFNVTPDTGIYL 334
Query: 442 TVAKYLSPALHDIDQVGITPDVQ 464
T+ ++ +P I+ GITPD++
Sbjct: 335 TIGRWYTPNGRMIEGQGITPDIE 357
Score = 39 (18.8 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 115 TLVEAWGLIRETFVDP 130
++V AW +I +V+P
Sbjct: 42 SIVNAWQIITTEYVEP 57
>TIGR_CMR|CJE_0618 [details] [associations]
symbol:CJE_0618 "carboxyl-terminal protease"
species:195099 "Campylobacter jejuni RM1221" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0006508 GO:GO:0004252
EMBL:CP000025 GenomeReviews:CP000025_GR SUPFAM:SSF50156
GO:GO:0070008 eggNOG:COG0793 KO:K03797 TIGRFAMs:TIGR00225
Gene3D:3.30.750.44 InterPro:IPR024070 MEROPS:S41.004
HOGENOM:HOG000038764 RefSeq:YP_178633.1 ProteinModelPortal:Q5HVQ2
STRING:Q5HVQ2 GeneID:3232059 KEGG:cjr:CJE0618 PATRIC:20042956
OMA:KITTALY ProtClustDB:CLSK872543
BioCyc:CJEJ195099:GJC0-633-MONOMER Uniprot:Q5HVQ2
Length = 444
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 105/319 (32%), Positives = 175/319 (54%)
Query: 154 ADAAYSKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSC 213
+D +SG+LS L D + ++ K++ +I ++G G+G I+V + G L V+S
Sbjct: 71 SDLVDKSLSGLLSNL-DAHSSFLNEKDFNDMKIQTNGEFGGLG--ITVGMKDGALTVVSP 127
Query: 214 VEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESG 273
+E +PA +AGI GD +++IN E GI+ A K+RG+ T +T+ + R+
Sbjct: 128 IEGTPADKAGIKSGDIILKINDEATLGINLNDAVDKMRGKPKTQITLTIF------RKGA 181
Query: 274 TR--EVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELES 331
T+ +V + R IK+ + +I + + L Y++++ F + D+A+ EL+
Sbjct: 182 TKPFDVTLTREIIKIESVYAKMIEN---ENIL----YLRVTNFDKNVV-DVASK--ELKK 231
Query: 332 -EGAHSYILDLRNNPV-ILRLDVAQIWLDGDETLVNAVDREGHTLPINM---VDG-HAIT 385
ILDLRNNP +L + + L D+ ++ V ++G N D + I+
Sbjct: 232 YPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVI--VSQKGRIASENQEYKADPKNKIS 289
Query: 386 HDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAK 445
+ LVVLVN GSASASEI++GAL D R ++VG TFGKG +Q + ++ AL +T+A+
Sbjct: 290 NASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQIIPINKTEALRLTIAR 349
Query: 446 YLSPALHDIDQVGITPDVQ 464
Y P+ I VG+ PD++
Sbjct: 350 YYLPSGRTIQAVGVKPDIE 368
>TIGR_CMR|SPO_3812 [details] [associations]
symbol:SPO_3812 "carboxyl-terminal protease family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50156 GO:GO:0070008 KO:K03797
TIGRFAMs:TIGR00225 Gene3D:3.30.750.44 InterPro:IPR024070
MEROPS:S41.004 HOGENOM:HOG000038764 RefSeq:YP_169000.1
ProteinModelPortal:Q5LLV9 GeneID:3196132 KEGG:sil:SPO3812
PATRIC:23381125 OMA:AINGMME ProtClustDB:CLSK934283 Uniprot:Q5LLV9
Length = 443
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 103/313 (32%), Positives = 173/313 (55%)
Query: 161 ISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAA 220
I GML++L DP + +SP + R+ + G G+G+ ++ E G + V+S ++ +PA
Sbjct: 69 IDGMLTSL-DPHSSYLSPDDAAQMRVQTRGEFGGLGIEVTQEE--GFVKVVSPIDGTPAD 125
Query: 221 RAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKV-HSGKDVGRESGTREVNI 279
AGI GD + ++GE + G+ + A +RG G+ + + V G+D +V+I
Sbjct: 126 EAGIEAGDFITHVDGESVLGLTLDKAVDLMRGPVGSEIVITVVREGEDE-----PFDVSI 180
Query: 280 PRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTI-HELESEGA---- 334
R IKL T + RT +G T ++++ F+ +++ + + ++E+ G
Sbjct: 181 IRDTIKL-----TAVRART-EG--TSV-VLRVTTFNDQTYSNLEDGLAKQVEAAGGIDKI 231
Query: 335 HSYILDLRNNP---VILRLDVAQIWLDGDETLVNAVDREGHTLP-INMVDGHAITHDPLV 390
+ ++LDLRNNP + + V+ +LD E +V+ R N G P+V
Sbjct: 232 NGFVLDLRNNPGGLLTQAIKVSDAFLDSGE-IVSTRGRNPEDGERFNATLGDLAQGKPVV 290
Query: 391 VLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAKYLSPA 450
VL+N GSASASEI+AGAL D+ RAI+VG K+FGKG +Q+V L A+ +T A+Y +P+
Sbjct: 291 VLINGGSASASEIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLRGDGAMRLTTARYYTPS 350
Query: 451 LHDIDQVGITPDV 463
I +G++PD+
Sbjct: 351 GRSIQALGVSPDI 363
>TIGR_CMR|BA_5414 [details] [associations]
symbol:BA_5414 "carboxyl-terminal protease" species:198094
"Bacillus anthracis str. Ames" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR001478 InterPro:IPR004447 InterPro:IPR005151
Pfam:PF03572 Pfam:PF13180 PROSITE:PS50106 SMART:SM00228
SMART:SM00245 InterPro:IPR002477 Pfam:PF01471 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50156 SUPFAM:SSF47090
GO:GO:0070008 Gene3D:1.10.101.10 HSSP:P31016 KO:K03797
TIGRFAMs:TIGR00225 Gene3D:3.30.750.44 InterPro:IPR024070
OMA:AINGMME RefSeq:NP_847585.1 RefSeq:YP_022076.1
ProteinModelPortal:Q81X31 IntAct:Q81X31 DNASU:1085000
EnsemblBacteria:EBBACT00000008065 EnsemblBacteria:EBBACT00000016596
GeneID:1085000 GeneID:2815429 KEGG:ban:BA_5414 KEGG:bar:GBAA_5414
PATRIC:18788452 HOGENOM:HOG000038765 ProtClustDB:CLSK2391404
BioCyc:BANT261594:GJ7F-5283-MONOMER Uniprot:Q81X31
Length = 469
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 92/307 (29%), Positives = 157/307 (51%)
Query: 161 ISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAA 220
I GMLSTL DP++ + + + F D L+G+G V G L+++S ++ SPA
Sbjct: 70 IQGMLSTLKDPYSTYMDKETAKQFSESLDPELEGIGA--EVNKTDGKLIIVSPIKGSPAE 127
Query: 221 RAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIP 280
+ GI D+++ ++G + + E A LK+RG+ GT V +++ K G + I
Sbjct: 128 KIGIKPNDQILSVDGNSVKDLSREEAVLKIRGKKGTTVAIEI---KRAG-VADPIVFKIK 183
Query: 281 RGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILD 340
R I + + ++ D GY+++++F++ A + + + ELE + ++D
Sbjct: 184 REKIPIFTVFSSVKQESGKD-----IGYMQITSFAENTAKEFKDQLKELEKKNIKGLVID 238
Query: 341 LRNNPVILRLDVAQIW---LDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGS 397
+R NP V +I + + ++ R G + + P+ VL++ GS
Sbjct: 239 VRGNPGGYLNSVEEILGEIMTDKKPMLQVEQRNGEKKKFSTELKERKPY-PISVLIDNGS 297
Query: 398 ASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHDGSALFVTVAKYLSPALHDIDQV 457
ASASEILAGAL + L+G KTFGKG +Q DGS + +T+ K+L+P + I +
Sbjct: 298 ASASEILAGALKEGEGYDLIGEKTFGKGTVQQAVPFKDGSNIKLTMFKWLTPDGNWIHKK 357
Query: 458 GITPDVQ 464
GI P V+
Sbjct: 358 GIKPTVE 364
>TIGR_CMR|SO_0047 [details] [associations]
symbol:SO_0047 "carboxyl-terminal protease, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] Pfam:PF00595 InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 PROSITE:PS50106 SMART:SM00228
SMART:SM00245 GO:GO:0006508 GO:GO:0008236 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF50156 KO:K03797
TIGRFAMs:TIGR00225 MEROPS:S41.004 HOGENOM:HOG000038764
RefSeq:NP_715689.1 ProteinModelPortal:Q8EKP4 GeneID:1167946
KEGG:son:SO_0047 PATRIC:23519795 OMA:KSYRSDF ProtClustDB:CLSK905565
Uniprot:Q8EKP4
Length = 402
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 100/345 (28%), Positives = 179/345 (51%)
Query: 136 DWDSKLQQTM---VEIFPLKSA---DAAYSKISGMLSTLGDPFTRIISPKEYQSFRIGSD 189
D+D L Q + VE + +K+ + + I G+ L DP++ ++ +E + +
Sbjct: 35 DFDYPLLQDVLETVETYYVKTVTKDELVQAAIKGIFEHL-DPYSSFLNHQELLDLKDSNR 93
Query: 190 GNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALK 249
G G G ++ E H+ +++ +SPA +AGI GD +I++N + +
Sbjct: 94 GEYFGFGFEVASEK--DHISIIAPFANSPAEQAGIQAGDIIIKLNNTPTTETNLADILNQ 151
Query: 250 LRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYV 309
++ + + ++++ + + E + +K S I+ + + DG++ GYV
Sbjct: 152 IKQHSLSHQSIRL----TLKHRNDEAEFEV---MLKPSTITIQSVASKLLDGNI---GYV 201
Query: 310 KLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPVILRLDVAQIWLDGDETLVNAVDR 369
+LS+F + + DM T+ + + ILDLRNNP L LD A D V
Sbjct: 202 RLSSFQEDSTEDMVRTLSQWQGTQLTGLILDLRNNPGGL-LDQAINIADLFLAKGRIVST 260
Query: 370 EGHTLPINMVDGHA-----ITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGK 424
G N D +A + + P++VL+N+GSASASE+LA AL +NGRA L+G +FGK
Sbjct: 261 SGRFFDANS-DYYASPQTMLANVPMLVLINKGSASASEVLAAALQENGRAKLLGETSFGK 319
Query: 425 GKIQSVTE-LHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTTD 468
G +QS+ L++G+A+ +T+A+Y +P +I +GI PD++ ++
Sbjct: 320 GTVQSLIPILNNGNAVKLTIAQYNTPKGENIHDIGIKPDIKVVSE 364
>TIGR_CMR|CPS_2810 [details] [associations]
symbol:CPS_2810 "carboxyl-terminal protease Prc"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006508
"proteolysis" evidence=ISS] Pfam:PF00595 InterPro:IPR001478
InterPro:IPR004447 InterPro:IPR005151 Pfam:PF03572 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0006508 GO:GO:0004252
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF50156
GO:GO:0070008 MEROPS:S41.001 eggNOG:COG0793 HOGENOM:HOG000277886
KO:K03797 OMA:GHVQYTI ProtClustDB:PRK11186 InterPro:IPR020992
Pfam:PF11818 TIGRFAMs:TIGR00225 Gene3D:3.30.750.44
InterPro:IPR024070 RefSeq:YP_269522.1 ProteinModelPortal:Q480J7
STRING:Q480J7 GeneID:3518874 KEGG:cps:CPS_2810 PATRIC:21468655
BioCyc:CPSY167879:GI48-2871-MONOMER Uniprot:Q480J7
Length = 683
Score = 268 (99.4 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 110/405 (27%), Positives = 197/405 (48%)
Query: 93 FAESLTVAFPASRAP-EVNTVQRTLVEAWGL-IRETFVDPTFNHQDWDSKLQQTMVEIFP 150
F + +F AP V+ + L E W L ++ ++ T ++W K+++ + + +
Sbjct: 146 FTKEEIYSFDREEAPWPVSEAE--LNELWRLKVKSDVLNLTLTKKEWP-KIKEVLTKRYE 202
Query: 151 -----LKSADA--AYSKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFI-SVE 202
LK +++ A+ + + + +P T +SP+ + F++ + +L+G+G + S+E
Sbjct: 203 YAIKRLKQSESEDAFQLVMNSFARVVEPHTSYLSPRNAERFQVDMNLSLEGIGAELRSIE 262
Query: 203 PRTG-HLVVLSCVED-SPAARA-----GIHEGDELIE-INGERLDGIDSEAAALKLRGRA 254
T H VV D S ++ G+ +GD+ E + G RLD + L ++G
Sbjct: 263 DYTVIHRVVTGGPADKSKQLKSKDRIVGVAQGDKDFEDVIGWRLDDV----VEL-IKGAK 317
Query: 255 GTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSP-ISRTIIPHRTPD-GHLTKTGYVKLS 312
GT V +++ SG D E+ + V+I R IKL +++ + PD K G + +
Sbjct: 318 GTTVRLQILSG-DSDDEANIKVVSIVRDIIKLEDRAAKSEVYLENPDVADSKKLGVITIP 376
Query: 313 AFSQTAAADMANTIHELESEGAHSYILDLRNNPVILRLDVAQIWLDG---DETLVNAVDR 369
+F + D+ I +L+ + I+DLR N L A + L G D+ V + R
Sbjct: 377 SFYNNLSKDVKKEIAKLKEQEVEGIIVDLRGNGGG-SLSEATL-LTGLFIDKGPVVQI-R 433
Query: 370 EG-HTLPINMV-DGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKI 427
+G + + +N DG + PL V+V+ SASASEI + A+ D GR +++G TFGKG +
Sbjct: 434 DGANRIQVNSDRDGVSFFDGPLTVMVDRYSASASEIFSAAIQDYGRGVIIGEHTFGKGTV 493
Query: 428 QS------VTELHD---GSALFVTVAKYLSPALHDIDQVGITPDV 463
Q V +L++ GS + T+AK+ G+ PD+
Sbjct: 494 QQHRGLGRVYDLYEKPLGSIQY-TIAKFYRINGGSTQHRGVLPDI 537
>UNIPROTKB|P23865 [details] [associations]
symbol:prc species:83333 "Escherichia coli K-12"
[GO:0030163 "protein catabolic process" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008236
"serine-type peptidase activity" evidence=IEA] [GO:0042493
"response to drug" evidence=EXP] Pfam:PF00595 InterPro:IPR001478
InterPro:IPR004447 InterPro:IPR005151 Pfam:PF03572 PROSITE:PS50106
SMART:SM00228 SMART:SM00245 GO:GO:0005886 GO:GO:0042493 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006508 GO:GO:0008236 GO:GO:0004175 GO:GO:0030163
SUPFAM:SSF50156 EMBL:D00674 EMBL:M75634 EMBL:S49803 EMBL:L48409
PIR:A41798 RefSeq:NP_416344.1 RefSeq:YP_490092.1
ProteinModelPortal:P23865 SMR:P23865 DIP:DIP-10557N IntAct:P23865
MINT:MINT-1283244 MEROPS:S41.001 PRIDE:P23865
EnsemblBacteria:EBESCT00000004142 EnsemblBacteria:EBESCT00000015918
GeneID:12934469 GeneID:946096 KEGG:ecj:Y75_p1806 KEGG:eco:b1830
PATRIC:32118981 EchoBASE:EB0753 EcoGene:EG10760 eggNOG:COG0793
HOGENOM:HOG000277886 KO:K03797 OMA:GHVQYTI ProtClustDB:PRK11186
BioCyc:EcoCyc:EG10760-MONOMER BioCyc:ECOL316407:JW1819-MONOMER
BioCyc:MetaCyc:EG10760-MONOMER Genevestigator:P23865
InterPro:IPR020992 Pfam:PF11818 TIGRFAMs:TIGR00225 Uniprot:P23865
Length = 682
Score = 256 (95.2 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 89/317 (28%), Positives = 151/317 (47%)
Query: 170 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARA-GIHEGD 228
DP T +SP+ + F +L+G+G + ++ + V+ S V PAA++ I GD
Sbjct: 223 DPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDD--DYTVINSMVAGGPAAKSKAISVGD 280
Query: 229 ELIEIN--GERL-DGID---SEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRG 282
+++ + G+ + D I + AL ++G G+ V +++ G+ + TR V + R
Sbjct: 281 KIVGVGQTGKPMVDVIGWRLDDVVAL-IKGPKGSKVRLEI---LPAGKGTKTRTVTLTRE 336
Query: 283 YIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLR 342
I+L R + G K G + + F D+ + +LE + S I+DLR
Sbjct: 337 RIRLE--DRAVKMSVKTVGK-EKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLR 393
Query: 343 NN---PVILRLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSAS 399
+N + + ++ +++ +V D G + DG PLVVLV+ SAS
Sbjct: 394 SNGGGALTEAVSLSGLFIPAGP-IVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSAS 452
Query: 400 ASEILAGALHDNGRAILVGHKTFGKGKIQ---SVTELHD----------GSALFVTVAKY 446
ASEI A A+ D GRA++VG TFGKG +Q S+ ++D GS + T+ K+
Sbjct: 453 ASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQY-TIQKF 511
Query: 447 LSPALHDIDQVGITPDV 463
+ G+TPD+
Sbjct: 512 YRVNGGSTQRKGVTPDI 528
>UNIPROTKB|Q9KRY7 [details] [associations]
symbol:VC_1496 "Tail-specific protease" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] Pfam:PF00595 InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 PROSITE:PS50106 SMART:SM00228
SMART:SM00245 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508
GO:GO:0004252 SUPFAM:SSF50156 GO:GO:0008233 InterPro:IPR012530
Pfam:PF08180 GO:GO:0070008 MEROPS:S41.001 KO:K03797 OMA:GHVQYTI
ProtClustDB:PRK11186 InterPro:IPR020992 Pfam:PF11818
TIGRFAMs:TIGR00225 Gene3D:3.30.750.44 InterPro:IPR024070 PIR:C82192
RefSeq:NP_231137.1 ProteinModelPortal:Q9KRY7 DNASU:2614002
GeneID:2614002 KEGG:vch:VC1496 PATRIC:20082048 Uniprot:Q9KRY7
Length = 665
Score = 241 (89.9 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 98/370 (26%), Positives = 167/370 (45%)
Query: 120 WGLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAYSKISGMLSTLGDPFTRIISPK 179
W I+ET +D +N+ +L QT KS D + ++ + DP T +SP+
Sbjct: 185 WPEIKET-LDKRYNNAI--KRLTQT-------KSEDVFQTYMNAFAREV-DPHTSYLSPR 233
Query: 180 EYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAG-IHEGDELIEINGERL 238
+ F+ + +L+G+G + + + ++ S V PAA + + EGD +I + E
Sbjct: 234 NAEQFQSEMNLSLEGIGAVLQMTD--DYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGE 291
Query: 239 DGIDSEAAALK-----LRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTI 293
D +D L ++G G+ V + V G+++ + V I R I+L R +
Sbjct: 292 DVVDVVGWRLDDVVQLIKGPKGSKVKLLV---LPEGKDAKSHVVTIVRDKIRLE--DRAV 346
Query: 294 IPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNN---PVILRL 350
+ K G +++ +F A D + EL+++ I+DLRNN +
Sbjct: 347 -KSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEAT 405
Query: 351 DVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHD 410
++ +++ +V D G + DG P+ VL+N SASASEI A A+ D
Sbjct: 406 ALSGLFITSGP-VVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYSASASEIFAAAMQD 464
Query: 411 NGRAILVGHKTFGKGKIQSVTELHDGSALF---VTVAKYLSPALHDID-----QVGITPD 462
GRAI++G +FGKG +Q L+ LF + +Y + ID G+ PD
Sbjct: 465 YGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPD 524
Query: 463 VQCTTDMLSS 472
+ T + S
Sbjct: 525 IAYPTAIAPS 534
>TIGR_CMR|VC_1496 [details] [associations]
symbol:VC_1496 "tail-specific protease" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0006508 "proteolysis" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=ISS] Pfam:PF00595
InterPro:IPR001478 InterPro:IPR004447 InterPro:IPR005151
Pfam:PF03572 PROSITE:PS50106 SMART:SM00228 SMART:SM00245
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006508 GO:GO:0004252
SUPFAM:SSF50156 GO:GO:0008233 InterPro:IPR012530 Pfam:PF08180
GO:GO:0070008 MEROPS:S41.001 KO:K03797 OMA:GHVQYTI
ProtClustDB:PRK11186 InterPro:IPR020992 Pfam:PF11818
TIGRFAMs:TIGR00225 Gene3D:3.30.750.44 InterPro:IPR024070 PIR:C82192
RefSeq:NP_231137.1 ProteinModelPortal:Q9KRY7 DNASU:2614002
GeneID:2614002 KEGG:vch:VC1496 PATRIC:20082048 Uniprot:Q9KRY7
Length = 665
Score = 241 (89.9 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 98/370 (26%), Positives = 167/370 (45%)
Query: 120 WGLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAYSKISGMLSTLGDPFTRIISPK 179
W I+ET +D +N+ +L QT KS D + ++ + DP T +SP+
Sbjct: 185 WPEIKET-LDKRYNNAI--KRLTQT-------KSEDVFQTYMNAFAREV-DPHTSYLSPR 233
Query: 180 EYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAG-IHEGDELIEINGERL 238
+ F+ + +L+G+G + + + ++ S V PAA + + EGD +I + E
Sbjct: 234 NAEQFQSEMNLSLEGIGAVLQMTD--DYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGE 291
Query: 239 DGIDSEAAALK-----LRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTI 293
D +D L ++G G+ V + V G+++ + V I R I+L R +
Sbjct: 292 DVVDVVGWRLDDVVQLIKGPKGSKVKLLV---LPEGKDAKSHVVTIVRDKIRLE--DRAV 346
Query: 294 IPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNN---PVILRL 350
+ K G +++ +F A D + EL+++ I+DLRNN +
Sbjct: 347 -KSEVIEKAGKKIGVLEVPSFYVGLAQDTEKLLAELKAKKVDGIIVDLRNNGGGALTEAT 405
Query: 351 DVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHD 410
++ +++ +V D G + DG P+ VL+N SASASEI A A+ D
Sbjct: 406 ALSGLFITSGP-VVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYSASASEIFAAAMQD 464
Query: 411 NGRAILVGHKTFGKGKIQSVTELHDGSALF---VTVAKYLSPALHDID-----QVGITPD 462
GRAI++G +FGKG +Q L+ LF + +Y + ID G+ PD
Sbjct: 465 YGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQNKGVVPD 524
Query: 463 VQCTTDMLSS 472
+ T + S
Sbjct: 525 IAYPTAIAPS 534
>UNIPROTKB|Q4K8E7 [details] [associations]
symbol:prc "Peptidase, S41 family" species:220664
"Pseudomonas protegens Pf-5" [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0008236
"serine-type peptidase activity" evidence=ISS] Pfam:PF00595
InterPro:IPR001478 InterPro:IPR004447 InterPro:IPR005151
Pfam:PF03572 PROSITE:PS50106 SMART:SM00228 SMART:SM00245
GO:GO:0005886 GO:GO:0006508 GO:GO:0008236 EMBL:CP000076
GenomeReviews:CP000076_GR SUPFAM:SSF50156 MEROPS:S41.001
eggNOG:COG0793 HOGENOM:HOG000277886 KO:K03797 OMA:GHVQYTI
InterPro:IPR020992 Pfam:PF11818 TIGRFAMs:TIGR00225
RefSeq:YP_261486.1 ProteinModelPortal:Q4K8E7 STRING:Q4K8E7
GeneID:3478517 KEGG:pfl:PFL_4394 PATRIC:19878216
ProtClustDB:CLSK867855 BioCyc:PFLU220664:GIX8-4429-MONOMER
Uniprot:Q4K8E7
Length = 705
Score = 240 (89.5 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 78/268 (29%), Positives = 135/268 (50%)
Query: 217 SPAARA-GIHEGD-ELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGT 274
+PA + G+ +GD E++++ G RLD E L +RG GT V ++V + + +
Sbjct: 290 APADKIIGVAQGDKEMVDVVGWRLD----EVVKL-IRGPKGTLVRLEVIPASNAPNDQTS 344
Query: 275 REVNIPRGYIKLSP--ISRTIIPHRTPDGHLTKTGYVKLSAFS-------------QTAA 319
+ V I R +KL + ++I+ + DG K G +++ AF ++
Sbjct: 345 KIVPITREAVKLEDQAVKKSIL-NLKQDGKDYKLGVIEIPAFYLDFKAFRAGDPDYKSTT 403
Query: 320 ADMANTIHELESEGAHSYILDLRNN---PVILRLDVAQIWLD-GDETLVNAVDREGHTLP 375
D+ + EL+ + ++DLRNN + ++ +++D G LV D G
Sbjct: 404 RDVKKLLTELQKDKVDGVVIDLRNNGGGSLQEATELTSLFIDKGPTVLVRNAD--GRVDV 461
Query: 376 INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTELHD 435
+ + A P+ +LVN SASASEI AGA+ D RA+++G +TFGKG +Q++ L+
Sbjct: 462 LEDENPGAFYKGPMALLVNRLSASASEIFAGAMQDYHRALIIGGQTFGKGTVQTIQPLNH 521
Query: 436 GSALFVTVAKYLSPALHDIDQVGITPDV 463
G L +T+AK+ + G+ PD+
Sbjct: 522 GE-LKLTLAKFYRVSGQSTQHQGVLPDI 548
>TIGR_CMR|SO_2601 [details] [associations]
symbol:SO_2601 "carboxyl-terminal protease" species:211586
"Shewanella oneidensis MR-1" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
Pfam:PF00595 InterPro:IPR001478 InterPro:IPR004447
InterPro:IPR005151 Pfam:PF03572 PROSITE:PS50106 SMART:SM00228
SMART:SM00245 GO:GO:0006508 GO:GO:0008236 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF50156 MEROPS:S41.001
HOGENOM:HOG000277886 KO:K03797 OMA:GHVQYTI ProtClustDB:PRK11186
InterPro:IPR020992 Pfam:PF11818 TIGRFAMs:TIGR00225
RefSeq:NP_718187.1 ProteinModelPortal:Q8EDY9 GeneID:1170303
KEGG:son:SO_2601 PATRIC:23524827 Uniprot:Q8EDY9
Length = 682
Score = 228 (85.3 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 94/389 (24%), Positives = 173/389 (44%)
Query: 99 VAFPASRAPEVNTVQRTLVEAWGLIRETFVDPTFNHQDWDSKLQQTMVEIFPLKSADAAY 158
VA+P +A E+N + R V+ L + D K ++ +++ +
Sbjct: 154 VAWPKDQA-EINELWRQRVKYDALNLKLTGKKWLEIVDILQKRYNNAIKRLTQTNSEDVF 212
Query: 159 SKISGMLSTLGDPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSP 218
+ S +P T +SP+ + F++ + +L+G+G + +E + V+ S + P
Sbjct: 213 QAVMNAFSRSIEPHTSYLSPRNAERFQMEMNLSLEGIGAQLQLED--DYTVIKSLIAGGP 270
Query: 219 AARA----------GI-HEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKD 267
AA + G+ EG E++++ G RLD + L ++G G+ V +++ K
Sbjct: 271 AAGSEKLSPEDKIVGVGQEGGEIVDVIGWRLDDV----VEL-IKGPKGSKVVLQILPKKG 325
Query: 268 VGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLT--KTGYVKLSAFSQTAAADMANT 325
G + V + R I+L + T DG K G +++ F + D+
Sbjct: 326 -GSNAKPFNVTLVRDKIRLEDRAATSKIIEPKDGVYANRKVGVIQIPGFYMNLSQDVEKE 384
Query: 326 IHELESEGAHSYILDLRNN---PVILRLDVAQIWLDGDETLVNAVDREGHTLPINMVDGH 382
+ +L ++DLR N + + + +++D +V D +G DG
Sbjct: 385 LLKLNEAKVEGVVIDLRGNGGGALTEAVLLTGLFIDMGP-VVQVRDADGRVSAHRDNDGK 443
Query: 383 AITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQ---SVTELHDGSAL 439
PL V+V+ SASASEI A AL D RA++VG +FGKG +Q S+ ++D
Sbjct: 444 TTYTGPLTVMVDRYSASASEIFAAALQDYDRALIVGESSFGKGTVQQHKSLGRIYDMYEK 503
Query: 440 FVTVAKYLSPALHDID----QV-GITPDV 463
+ +Y + I+ Q+ G+TP++
Sbjct: 504 PIGHVQYTIQKFYRINGGSTQLKGVTPNI 532
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 510 475 0.00078 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 621 (66 KB)
Total size of DFA: 281 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.45u 0.10s 37.55t Elapsed: 00:00:01
Total cpu time: 37.46u 0.10s 37.56t Elapsed: 00:00:01
Start: Fri May 10 16:12:39 2013 End: Fri May 10 16:12:40 2013