Your job contains 1 sequence.
>047095
MTFISEMFDTSIDNILSFNPQVPDKDILSVGSRIKVPFKCNCINGQFLANNFSYKIISHD
TYAKVAETYYANLTTVDWLRANNIFPDNNIPDVNTTINVVVNCSCGDKKVSKDYGLFLTY
PIELGENLSTIANMSGLSPELLQSYNRGSDFSSGLVFIPEKDQSGKYPPLQMSRDGTDFF
ECASLLLI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047095
(188 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089860 - symbol:CERK1 "chitin elicitor recept... 452 9.3e-43 1
UNIPROTKB|D7UPN3 - symbol:CERK1 "Chitin elicitor receptor... 328 6.2e-29 1
UNIPROTKB|Q8H8C7 - symbol:CEBIP "Chitin elicitor-binding ... 136 4.4e-08 1
TAIR|locus:2204720 - symbol:LYM3 "lysin-motif (LysM) doma... 135 1.3e-07 1
TAIR|locus:2201143 - symbol:LYP2 "LysM-containing recepto... 133 2.9e-07 1
TAIR|locus:2049029 - symbol:LYK4 "LysM-containing recepto... 125 1.0e-05 1
TAIR|locus:2050987 - symbol:LYK5 "LysM-containing recepto... 123 2.1e-05 1
TAIR|locus:2827686 - symbol:LYP1 "LysM-containing recepto... 119 2.7e-05 1
TAIR|locus:2082359 - symbol:LYK2 "LysM-containing recepto... 119 6.9e-05 1
>TAIR|locus:2089860 [details] [associations]
symbol:CERK1 "chitin elicitor receptor kinase 1"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0019199
"transmembrane receptor protein kinase activity" evidence=IMP;IDA]
[GO:0032491 "detection of molecule of fungal origin"
evidence=IEP;IMP] [GO:0035556 "intracellular signal transduction"
evidence=RCA;IDA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] [GO:0009817 "defense response to fungus, incompatible
interaction" evidence=IMP] [GO:0010200 "response to chitin"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0002752 "cell surface pattern recognition receptor signaling
pathway" evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=IDA] [GO:0008061 "chitin binding" evidence=IDA]
[GO:2001080 "chitosan binding" evidence=IDA] [GO:0032499 "detection
of peptidoglycan" evidence=IMP] [GO:0045087 "innate immune
response" evidence=IMP] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031347 "regulation of defense
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0071219 "cellular
response to molecule of bacterial origin" evidence=IEP] [GO:0071323
"cellular response to chitin" evidence=IEP] InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR018392 Pfam:PF00069 Pfam:PF01476 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0042803
EMBL:AB019232 GO:GO:0035556 eggNOG:COG0515 GO:GO:0042742
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0046777 GO:GO:0009817
GO:GO:0005622 GO:GO:0043621 Gene3D:2.60.120.200 InterPro:IPR013320
GO:GO:0019199 GO:GO:0071219 GO:GO:0008061 HOGENOM:HOG000116550
GO:GO:0016998 EMBL:AB367524 IPI:IPI00521578 RefSeq:NP_566689.2
UniGene:At.5663 PDB:4EBY PDB:4EBZ PDBsum:4EBY PDBsum:4EBZ
ProteinModelPortal:A8R7E6 SMR:A8R7E6 STRING:A8R7E6 PRIDE:A8R7E6
EnsemblPlants:AT3G21630.1 GeneID:821717 KEGG:ath:AT3G21630
GeneFarm:2740 TAIR:At3g21630 InParanoid:A8R7E6 KO:K13429
OMA:ARACTQE PhylomeDB:A8R7E6 ProtClustDB:CLSN2918177
Genevestigator:A8R7E6 GO:GO:2001080 GO:GO:0002752 GO:GO:0071323
GO:GO:0032491 GO:GO:0032499 Uniprot:A8R7E6
Length = 617
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 85/169 (50%), Positives = 122/169 (72%)
Query: 11 SIDNILSFNPQVPDKDILSVGSRIKVPFKCNCINGQFLANNFSYKIISHDTYAKVAETYY 70
+ D IL +N + DKD + +GSR+ VPF C C G FL +NFSY + DTY +VA + Y
Sbjct: 62 NFDPILRYNSNIKDKDRIQMGSRVLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNY 121
Query: 71 ANLTTVDWLRANNIFPDNNIPDVNTTINVVVNCSCGDKKVSKDYGLFLTYPIELGENLST 130
ANLTT++ L+A N FP NIP ++ T+NV+VNCSCGD+ VSKD+GLF+TYP+ ++LS+
Sbjct: 122 ANLTTMESLQARNPFPATNIP-LSATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSS 180
Query: 131 IANMSGLSPELLQSYNRGSDFSSG--LVFIPEKDQSGKYPPLQMSR-DG 176
IA SG+S ++LQ YN G +F+SG +V++P +D +G +PP + S+ DG
Sbjct: 181 IARSSGVSADILQRYNPGVNFNSGNGIVYVPGRDPNGAFPPFKSSKQDG 229
>UNIPROTKB|D7UPN3 [details] [associations]
symbol:CERK1 "Chitin elicitor receptor kinase 1"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] [GO:0008061 "chitin binding" evidence=IDA]
[GO:0010200 "response to chitin" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IDA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0006952 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0043621 Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0010200
GO:GO:0008061 EMBL:AP008215 EMBL:CM000146 HOGENOM:HOG000116550
EMBL:AB510402 EMBL:AK061724 KEGG:dosa:Os09t0325000-00
KEGG:dosa:Os09t0325140-00 KEGG:dosa:Os09t0511000-02 OMA:PEARYGE
Uniprot:D7UPN3
Length = 605
Score = 328 (120.5 bits), Expect = 6.2e-29, P = 6.2e-29
Identities = 78/190 (41%), Positives = 105/190 (55%)
Query: 1 MTFISEMFDTS---IDNILSFNPQVPDKDILSVGSRIKVPFKCNCIN------GQFLANN 51
+TFI+ +F +L +NP + + D + G R+ VPF C+C+ FLA
Sbjct: 45 LTFIATIFAIGGGGYQALLPYNPAITNPDYVVTGDRVLVPFPCSCLGLPAAPASTFLAGA 104
Query: 52 FSYKII----SHDTYAKVAETYYANLTTVDWLRANNIFPDNNIPDVNTTINVVVNCSCGD 107
Y + DTY VA Y A+LTT WL A N +P IP + +NV +NCSCGD
Sbjct: 105 IPYPLPLPRGGGDTYDAVAANY-ADLTTAAWLEATNAYPPGRIPGGDGRVNVTINCSCGD 163
Query: 108 KKVSKDYGLFLTYPIELGENLSTIANMSGLS-P---ELLQSYNRGSDFSSG--LVFIPEK 161
++VS YGLFLTYP+ GE L ++A G S P EL++ YN G SG +VFIP K
Sbjct: 164 ERVSPRYGLFLTYPLWDGETLESVAAQYGFSSPAEMELIRRYNPGMGGVSGKGIVFIPVK 223
Query: 162 DQSGKYPPLQ 171
D +G Y PL+
Sbjct: 224 DPNGSYHPLK 233
>UNIPROTKB|Q8H8C7 [details] [associations]
symbol:CEBIP "Chitin elicitor-binding protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IDA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016021 GO:GO:0005886 GO:GO:0006952
EMBL:DP000009 EMBL:AP008209 GO:GO:0043621 GO:GO:0008061
EMBL:CM000146 EMBL:AB206975 EMBL:AC099399 EMBL:AK073032
RefSeq:NP_001048875.1 UniGene:Os.11983 ProteinModelPortal:Q8H8C7
STRING:Q8H8C7 EnsemblPlants:LOC_Os03g04110.1 GeneID:4331523
KEGG:dosa:Os03t0133400-01 KEGG:osa:4331523 Gramene:Q8H8C7
eggNOG:NOG329912 HOGENOM:HOG000239699 KO:K13473 OMA:LRIPLPC
ProtClustDB:CLSN2693483 GO:GO:0016998 Uniprot:Q8H8C7
Length = 356
Score = 136 (52.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 42/147 (28%), Positives = 70/147 (47%)
Query: 10 TSIDNILSFNPQVPDKDILSV----GSRIKVPFKCNCINGQFLANNFS--YKIISHDTYA 63
T++ ++L N +PD + S S +K+PF+C C NG ++ Y + D
Sbjct: 65 TTLPDLLGANG-LPDGTLSSAPVAANSTVKIPFRCRC-NGDVGQSDRLPIYVVQPQDGLD 122
Query: 64 KVAETYYANLTTVDWLRANNIFPDNNIPDVNTTINVVVNCSCGDKKVSKDYGLFLTYPIE 123
+A + T + A N PD N +V+ T+ + + CSC DK+ + + L Y +
Sbjct: 123 AIARNVFNAFVTYQEIAAANNIPDPNKINVSQTLWIPLPCSC-DKEEGSNV-MHLAYSVG 180
Query: 124 LGENLSTIANMSGLSPELLQSYNRGSD 150
GEN S IA G++ L + N+ D
Sbjct: 181 KGENTSAIAAKYGVTESTLLTRNKIDD 207
>TAIR|locus:2204720 [details] [associations]
symbol:LYM3 "lysin-motif (LysM) domain protein 3"
species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA;ISS] [GO:0031225 "anchored to membrane"
evidence=TAS] [GO:0046658 "anchored to plasma membrane"
evidence=IDA] [GO:0006955 "immune response" evidence=IMP]
[GO:0042834 "peptidoglycan binding" evidence=IDA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002482
InterPro:IPR018392 Pfam:PF01476 SMART:SM00257 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006955 GO:GO:0006952 EMBL:AC010704
GO:GO:0042834 GO:GO:0046658 GO:GO:0016998 HOGENOM:HOG000083326
ProtClustDB:CLSN2714457 EMBL:BT010885 EMBL:AK176769 IPI:IPI00520912
PIR:H96805 RefSeq:NP_177886.2 UniGene:At.24354
ProteinModelPortal:Q6NPN4 SMR:Q6NPN4 PaxDb:Q6NPN4 PRIDE:Q6NPN4
EnsemblPlants:AT1G77630.1 GeneID:844098 KEGG:ath:AT1G77630
TAIR:At1g77630 eggNOG:NOG309651 InParanoid:Q6NPN4 OMA:YCEPASI
PhylomeDB:Q6NPN4 Genevestigator:Q6NPN4 GermOnline:AT1G77630
Uniprot:Q6NPN4
Length = 423
Score = 135 (52.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 41/168 (24%), Positives = 82/168 (48%)
Query: 4 ISEMFDTSIDNILSFNPQVPDKDILSVGSRIKVPFKCNCINGQFLANNFSYKIISHDTYA 63
+S + SID +S+ P V + +L +K+P C+C++G + + YK + DT
Sbjct: 63 VSMLLSNSID--ISY-PDV-ENHVLPAKLFLKIPITCSCVDGIRKSLSTHYKTRTSDTLG 118
Query: 64 KVAETYYANLTTVDWLRANNIFPDNNIPDVNTTINVVVNCSCGDKKVSKDYGLFLTYPIE 123
+A++ Y L + + ++ N D ++ DV T + + + C+C + L+L+Y +
Sbjct: 119 SIADSVYGGLVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDESLPALYLSYVVR 178
Query: 124 LGENLSTIANMSGLSPELLQSYNR-GS-DFSSG-LVFIPEKDQSGKYP 168
+ ++ IA S L + N G+ D + G ++ +P S +P
Sbjct: 179 GIDTMAGIAKRFSTSVTDLTNVNAMGAPDINPGDILAVPLLACSSNFP 226
>TAIR|locus:2201143 [details] [associations]
symbol:LYP2 "LysM-containing receptor protein 2"
species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA;ISS] [GO:0031225 "anchored to membrane"
evidence=TAS] [GO:0046658 "anchored to plasma membrane"
evidence=IDA] [GO:0006955 "immune response" evidence=IMP]
[GO:0042834 "peptidoglycan binding" evidence=IDA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0016570
"histone modification" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0006955 GO:GO:0006952 GO:GO:0042834
GO:GO:0046658 GO:GO:0016998 EMBL:AC013482 EMBL:AY057542
IPI:IPI00535769 IPI:IPI00539017 PIR:B86352 RefSeq:NP_564153.1
RefSeq:NP_849697.1 UniGene:At.25611 UniGene:At.48217
ProteinModelPortal:Q93ZH0 SMR:Q93ZH0 STRING:Q93ZH0 PaxDb:Q93ZH0
PRIDE:Q93ZH0 EnsemblPlants:AT1G21880.2 GeneID:838790
KEGG:ath:AT1G21880 TAIR:At1g21880 eggNOG:NOG305960
HOGENOM:HOG000083326 InParanoid:Q93ZH0 OMA:SAGCNVT PhylomeDB:Q93ZH0
ProtClustDB:CLSN2714457 Genevestigator:Q93ZH0 GermOnline:AT1G21880
Uniprot:Q93ZH0
Length = 416
Score = 133 (51.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 42/168 (25%), Positives = 84/168 (50%)
Query: 4 ISEMFDTSIDNILSFNPQVPDKDILSVGSRIKVPFKCNCINGQFLANNFSYKIISHDTYA 63
IS + +ID +S+ P V + IL +K+P C+C++G + + YK D
Sbjct: 66 ISILLANAID--ISY-PDV-ENHILPSKLFLKIPITCSCVDGIRKSVSTHYKTRPSDNLG 121
Query: 64 KVAETYYANLTTVDWLRANNIFPDNNIPDVNTTINVVVNCSCGDKKVSKDYGLFLTYPIE 123
+A++ Y L + + ++ N D ++ DV T++ + + C+C + + ++L+Y ++
Sbjct: 122 SIADSVYGGLVSAEQIQEANSVNDPSLLDVGTSLVIPLPCACFNGTDNSLPAVYLSYVVK 181
Query: 124 LGENLSTIANMSGLSPELLQSYNR-GS-DFSSG-LVFIPEKDQSGKYP 168
+ L IA + L + N G+ D SSG ++ +P + K+P
Sbjct: 182 EIDTLVGIARRYSTTITDLMNVNAMGAPDVSSGDILAVPLSACASKFP 229
>TAIR|locus:2049029 [details] [associations]
symbol:LYK4 "LysM-containing receptor-like kinase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0008061 "chitin
binding" evidence=IDA] [GO:0045087 "innate immune response"
evidence=IMP] [GO:0071219 "cellular response to molecule of
bacterial origin" evidence=IEP] [GO:0071323 "cellular response to
chitin" evidence=IEP] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR002482 InterPro:IPR007110 InterPro:IPR011009
InterPro:IPR018392 Pfam:PF01476 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00257 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0045087 Gene3D:2.60.120.200
InterPro:IPR013320 GO:GO:0004672 GO:GO:0071219 GO:GO:0008061
EMBL:AC004482 GO:GO:0016998 GO:GO:0071323 IPI:IPI00520503
PIR:T02414 RefSeq:NP_179957.1 UniGene:At.39248
ProteinModelPortal:O64825 SMR:O64825 PaxDb:O64825 PRIDE:O64825
EnsemblPlants:AT2G23770.1 GeneID:816909 KEGG:ath:AT2G23770
GeneFarm:2738 TAIR:At2g23770 HOGENOM:HOG000238861 InParanoid:O64825
OMA:YFAIAND PhylomeDB:O64825 ProtClustDB:CLSN2683013
Genevestigator:O64825 Uniprot:O64825
Length = 612
Score = 125 (49.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 1 MTFISEMFDTSIDNILSFNPQVPDKDILSVGSRIKVPFKCNCINGQFLANNFSYKIISHD 60
+T IS +F + S N P S G ++ +P C+C G +N +Y I +D
Sbjct: 70 VTSISSLFSVDPSLVSSLNDASPSTSFPS-GQQVIIPLTCSC-TGDDSQSNITYTIQPND 127
Query: 61 TYAKVAETYYANLTTVDWL-RANNIFPDNNIPDVNTTINVVVNCSCGD-KKVSKDYGLFL 118
+Y +A L+T L + NN+ + P + I V + C+C K++++D +L
Sbjct: 128 SYFAIANDTLQGLSTCQALAKQNNVSSQSLFPGMR--IVVPIRCACPTAKQINEDGVKYL 185
Query: 119 -TYPIELGENLSTIANMSGLSPELLQSYNRGSDFSSGLVF 157
+Y + + ++ I++ G+ N S F + VF
Sbjct: 186 MSYTVVFEDTIAIISDRFGVETSKTLKANEMS-FENSEVF 224
>TAIR|locus:2050987 [details] [associations]
symbol:LYK5 "LysM-containing receptor-like kinase 5"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0010200 "response
to chitin" evidence=RCA] [GO:0008061 "chitin binding" evidence=IDA]
[GO:0071323 "cellular response to chitin" evidence=IEP]
InterPro:IPR000719 InterPro:IPR011009 InterPro:IPR018392
Pfam:PF00069 Pfam:PF01476 PROSITE:PS00107 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0004672 GO:GO:0008061
GO:GO:0016998 GO:GO:0071323 EMBL:AC002332 HOGENOM:HOG000238861
EMBL:AF370600 EMBL:BT046191 IPI:IPI00525328 PIR:C84747
RefSeq:NP_180916.1 UniGene:At.12134 ProteinModelPortal:O22808
SMR:O22808 STRING:O22808 PaxDb:O22808 PRIDE:O22808
EnsemblPlants:AT2G33580.1 GeneID:817923 KEGG:ath:AT2G33580
GeneFarm:2737 TAIR:At2g33580 InParanoid:O22808 OMA:LTRHVVG
PhylomeDB:O22808 ProtClustDB:CLSN2913107 Genevestigator:O22808
Uniprot:O22808
Length = 664
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/154 (23%), Positives = 77/154 (50%)
Query: 11 SIDNILSFNPQVPDKDILSVGSRIKVPFKCNCIN--GQFLANNFSYKIISH---DTYAKV 65
SI+N+ + ++P +++ + +P C+C + G F +N +Y + + +TY V
Sbjct: 89 SINNLPTATTRIPTREL------VVIPANCSCSSSSGGFYQHNATYNLSGNRGDETYFSV 142
Query: 66 AETYYANLTTVDWLRANNIFPDNNI-PDVNTTINVVVNCSCGD-KKVSKDYGLFLTYPIE 123
A Y L+T + + N + + + P +N + V + C+C K+ + + LTY +
Sbjct: 143 ANDTYQALSTCQAMMSQNRYGERQLTPGLN--LLVPLRCACPTAKQTTAGFKYLLTYLVA 200
Query: 124 LGENLSTIANMSGLSPELLQSYNRGSDFSSGLVF 157
+G+++S IA M + + G++ +S +F
Sbjct: 201 MGDSISGIAEMFNSTSAAI---TEGNELTSDNIF 231
>TAIR|locus:2827686 [details] [associations]
symbol:LYP1 "LysM-containing receptor protein 1"
species:3702 "Arabidopsis thaliana" [GO:0016998 "cell wall
macromolecule catabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] [GO:0008061 "chitin
binding" evidence=IDA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0008061 GO:GO:0046658
eggNOG:NOG329912 HOGENOM:HOG000239699 GO:GO:0016998
UniGene:At.12294 UniGene:At.48484 EMBL:AF428464 EMBL:AY056221
EMBL:AY125560 EMBL:AY088373 IPI:IPI00521359 PIR:C84548
RefSeq:NP_565406.1 ProteinModelPortal:O23006 SMR:O23006
PaxDb:O23006 PRIDE:O23006 EnsemblPlants:AT2G17120.1 GeneID:816217
KEGG:ath:AT2G17120 TAIR:At2g17120 InParanoid:O23006 OMA:DVPLRAC
PhylomeDB:O23006 ProtClustDB:CLSN2715733 Genevestigator:O23006
GermOnline:AT2G17120 Uniprot:O23006
Length = 350
Score = 119 (46.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 34 IKVPFKCNCINGQFLAN-NFSYKIISHDTYAKVAETYYANLTTVDWLRANNIFPDNNIPD 92
++VP C+C NG ++N + Y I D + VA + L T + + N PD N +
Sbjct: 89 VRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIE 148
Query: 93 VNTTINVVVNCSCGDKKVSKDYGLFLTYPIELGENLSTIANMSGLSPELLQSYN 146
+ + + CSC DK +D + + ++LG +L IA G L N
Sbjct: 149 IGQKFWIPLPCSC-DKLNGEDV-VHYAHVVKLGSSLGEIAAQFGTDNTTLAQLN 200
>TAIR|locus:2082359 [details] [associations]
symbol:LYK2 "LysM-containing receptor-like kinase 2"
species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016301 "kinase activity"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF56112
GO:GO:0004672 EMBL:AC010797 UniGene:At.41224 IPI:IPI00541235
RefSeq:NP_186833.1 UniGene:At.41222 ProteinModelPortal:Q9SGI7
SMR:Q9SGI7 PRIDE:Q9SGI7 EnsemblPlants:AT3G01840.1 GeneID:820047
KEGG:ath:AT3G01840 GeneFarm:2726 TAIR:At3g01840 eggNOG:NOG303928
HOGENOM:HOG000090363 InParanoid:Q9SGI7 OMA:FIASCYC PhylomeDB:Q9SGI7
ProtClustDB:CLSN2685019 Genevestigator:Q9SGI7 Uniprot:Q9SGI7
Length = 654
Score = 119 (46.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 24 DKDILSVGSRIKVPFKCNCINGQFLANNFSYKIISHDTYAKVAETYYANLTTVDWLRANN 83
D + + G + +P +C C NG + + DT+ V+++ LTT +R N
Sbjct: 84 DDEYVPKGQLLLIPIECRC-NGSIYEASLIKNCVKGDTFRSVSQSLQG-LTTCLSIREKN 141
Query: 84 I-FPDNNIPDVNTTINVVVNCSCGDKKVSKDYGLFLTYPIELGENLSTIANMSGLSPELL 142
++ + D N + + + CSC + VS + +TYP+ + +++S++A + + +
Sbjct: 142 PHISEDKLGD-NIKLRLAIRCSCPQEGVS-NASFLVTYPVGVRDSVSSLAVRFNTTEDAI 199
Query: 143 QSYNRGSD---FSSGLVFI---PEKDQSGKYPPLQMSR 174
S N S L+ + PEK S K P + R
Sbjct: 200 VSANNKSGVVPLKPALIPLDHKPEKQGSRKRNPSKKKR 237
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 188 188 0.00087 110 3 11 22 0.45 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 587 (62 KB)
Total size of DFA: 161 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.06u 0.18s 18.24t Elapsed: 00:00:01
Total cpu time: 18.06u 0.18s 18.24t Elapsed: 00:00:01
Start: Fri May 10 16:14:17 2013 End: Fri May 10 16:14:18 2013