BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047104
MATKYIVGSLIGSCALAYAFDQIIAEKKIFGGTTPKTVSDKEWWEETDKKFQAWPRVAGP
PVVMNPISRQNFIVKSSTEA

High Scoring Gene Products

Symbol, full name Information P value
AT1G01170 protein from Arabidopsis thaliana 6.4e-28
ATOZI1
AT4G00860 		protein from Arabidopsis thaliana 8.7e-24

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047104
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2035247 - symbol:AT1G01170 "AT1G01170" species...   312  6.4e-28   1
TAIR|locus:2134568 - symbol:ATOZI1 "AT4G00860" species:37...   273  8.7e-24   1


>TAIR|locus:2035247 [details] [associations]
            symbol:AT1G01170 "AT1G01170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
            EMBL:CP002684 GO:GO:0005739 GO:GO:0016020 UniGene:At.11894
            UniGene:At.71103 EMBL:BT024529 IPI:IPI00519801
            RefSeq:NP_001030926.1 RefSeq:NP_171625.1 STRING:Q2HIQ2 PaxDb:Q2HIQ2
            PRIDE:Q2HIQ2 EnsemblPlants:AT1G01170.1 EnsemblPlants:AT1G01170.2
            GeneID:839263 KEGG:ath:AT1G01170 TAIR:At1g01170 eggNOG:NOG269527
            HOGENOM:HOG000239250 InParanoid:Q2HIQ2 OMA:QATDTKF PhylomeDB:Q2HIQ2
            ProtClustDB:CLSN2682840 Genevestigator:Q2HIQ2 InterPro:IPR009515
            Pfam:PF06592 Uniprot:Q2HIQ2
        Length = 83

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 55/76 (72%), Positives = 66/76 (86%)

Query:     4 KYIVGSLIGSCALAYAFDQIIAEKKIFGGTTPKTVSDKEWWEETDKKFQAWPRVAGPPVV 63
             KYI+G+LIGS  ++Y FD++I++ KIFGGTTP TVS+KEWW  TD+KFQAWPR AGPPVV
Sbjct:     8 KYIIGALIGSFGISYIFDKVISDNKIFGGTTPGTVSNKEWWAATDEKFQAWPRTAGPPVV 67

Query:    64 MNPISRQNFIVKSSTE 79
             MNPISRQNFIVK+  E
Sbjct:    68 MNPISRQNFIVKTRPE 83


>TAIR|locus:2134568 [details] [associations]
            symbol:ATOZI1 "AT4G00860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0000302 "response to reactive oxygen species" evidence=IEP]
            [GO:0009617 "response to bacterium" evidence=IEP] [GO:0010193
            "response to ozone" evidence=IEP] GO:GO:0005739 GO:GO:0009536
            GO:GO:0009617 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005777
            GO:GO:0016020 GO:GO:0010193 EMBL:AL161472 EMBL:AF013294
            HOGENOM:HOG000239250 ProtClustDB:CLSN2682840 InterPro:IPR009515
            Pfam:PF06592 EMBL:U20347 EMBL:AY093001 EMBL:AY114604
            IPI:IPI00543581 PIR:S59544 RefSeq:NP_191995.1 UniGene:At.23328
            STRING:Q38842 PaxDb:Q38842 PRIDE:Q38842 EnsemblPlants:AT4G00860.1
            GeneID:826213 KEGG:ath:AT4G00860 TAIR:At4g00860 eggNOG:NOG262425
            InParanoid:Q38842 OMA:QAWPRVA PhylomeDB:Q38842
            Genevestigator:Q38842 Uniprot:Q38842
        Length = 80

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 48/75 (64%), Positives = 62/75 (82%)

Query:     5 YIVGSLIGSCALAYAFDQIIAEKKIFGGTTPKTVSDKEWWEETDKKFQAWPRVAGPPVVM 64
             YI+G+L GS  +AY  D++I++ K+FGGTTP T+++KEW   T+++ QAWPRVAGPPVVM
Sbjct:     6 YIIGALAGSAVVAYVCDKVISDDKLFGGTTPGTITNKEWGAATEERLQAWPRVAGPPVVM 65

Query:    65 NPISRQNFIVKSSTE 79
             NPISRQNFIVKS  E
Sbjct:    66 NPISRQNFIVKSRPE 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        80   0.00091  102 3  11 22  0.43    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  112 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.84u 0.17s 9.01t   Elapsed:  00:00:01
  Total cpu time:  8.84u 0.17s 9.01t   Elapsed:  00:00:01
  Start:  Tue May 21 00:05:07 2013   End:  Tue May 21 00:05:08 2013

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