BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047111
(106 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255634861|gb|ACU17789.1| unknown [Glycine max]
Length = 222
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 85/106 (80%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
M +E+EKAA RL+ A+LVLRR N++K +SRESK+DP+EL PVTK+ LVA+VA QL ++
Sbjct: 117 MMKEYEKAALRLDKAQLVLRRLINVQKAKSRESKEDPLELRYPVTKDTLVAEVARQLCVN 176
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
+ P+ LHLPSPLS GEYEVP+R+ ++IPLPEGKV W+ VKV K
Sbjct: 177 VAPDNLHLPSPLSTLGEYEVPLRIPRSIPLPEGKVNWSLKVKVRSK 222
>gi|356517474|ref|XP_003527412.1| PREDICTED: 50S ribosomal protein L9-like isoform 1 [Glycine max]
gi|356517476|ref|XP_003527413.1| PREDICTED: 50S ribosomal protein L9-like isoform 2 [Glycine max]
Length = 222
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 85/106 (80%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
M +E+EKAA RL+ A+LVLRR N++K +SRESK+DP+EL PVTK+ LVA+VA QL ++
Sbjct: 117 MMKEYEKAALRLDKAQLVLRRLINVQKAKSRESKEDPLELRYPVTKDTLVAEVARQLCVN 176
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
+ P+ LHLPSPLS GEYEVP+R+ ++IPLPEGKV W+ VKV K
Sbjct: 177 VAPDNLHLPSPLSTLGEYEVPLRIPRSIPLPEGKVNWSLKVKVRSK 222
>gi|356571485|ref|XP_003553907.1| PREDICTED: 50S ribosomal protein L9-like [Glycine max]
Length = 222
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 85/106 (80%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
M +E+EKAA RL+ A+LVLRR N++K +SRESK+DP+EL PVTK+ LVA+VA QL ++
Sbjct: 117 MMKEYEKAALRLDKAKLVLRRLINVQKAKSRESKEDPLELRYPVTKDILVAEVARQLCVN 176
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
+ P+ LHLPSPLS GEYEVP+RL ++IPLPEGKV W+ VK+ K
Sbjct: 177 VAPDNLHLPSPLSTLGEYEVPLRLPRSIPLPEGKVNWSLKVKIRSK 222
>gi|356558761|ref|XP_003547671.1| PREDICTED: 50S ribosomal protein L9-like [Glycine max]
Length = 222
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 85/106 (80%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
M +E+EKAA RL+ A+LVLRR N++K +SRESKDDP+EL PVTK+ LVA+V+ Q+ ++
Sbjct: 117 MMKEYEKAALRLDKAKLVLRRLINVQKAKSRESKDDPLELRYPVTKDILVAEVSRQICVN 176
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
+ P+ LHLPSPL+ GEYEVP+RL ++IPLPEGKV W+ VK+ K
Sbjct: 177 VAPDNLHLPSPLATLGEYEVPLRLPRSIPLPEGKVNWSLKVKIRSK 222
>gi|255645711|gb|ACU23349.1| unknown [Glycine max]
Length = 150
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 85/106 (80%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
M +E+EKAA RL+ A+LVLRR N++K +SRESKDDP+EL PVTK+ LVA+V+ Q+ ++
Sbjct: 45 MMKEYEKAALRLDKAKLVLRRLINVQKAKSRESKDDPLELRYPVTKDILVAEVSRQICVN 104
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
+ P+ LHLPSPL+ GEYEVP+RL ++IPLPEGKV W+ VK+ K
Sbjct: 105 VAPDNLHLPSPLATLGEYEVPLRLPRSIPLPEGKVNWSLKVKIRSK 150
>gi|224118314|ref|XP_002317788.1| predicted protein [Populus trichocarpa]
gi|222858461|gb|EEE96008.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E+E AA+R ARL R N K RSRESKDDPIE+ SPVTK++++ +V Q ++ IE
Sbjct: 116 KEYETAAKRFVKARLAFRVGINTAKFRSRESKDDPIEILSPVTKDDILKEVTRQFNVQIE 175
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
P+ +HLPSPL+A GE+EVP+R K+IPLPEGKV+WT VK+ GK
Sbjct: 176 PDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLQVKIRGK 219
>gi|388493818|gb|AFK34975.1| unknown [Lotus japonicus]
Length = 222
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 83/106 (78%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
+ +E+E AA RL+ A+LVLRR +++K ++R SKD+P+E+ PVTKE LVA+VA QL ++
Sbjct: 117 LMKEYEAAALRLDKAKLVLRRLIDVKKAKARASKDEPLEIRLPVTKEVLVAEVARQLCVN 176
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
I PE LHLPSPLS GEYEVP+RL ++IPLPEGKV W+ VKV K
Sbjct: 177 IAPENLHLPSPLSTVGEYEVPLRLPRSIPLPEGKVNWSLQVKVRSK 222
>gi|224146953|ref|XP_002336372.1| predicted protein [Populus trichocarpa]
gi|222834835|gb|EEE73284.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 80/104 (76%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E+E AA+RL ARL R N K R+RESKDDPIE+ SPVTK++++ +V Q ++ IE
Sbjct: 116 KEYETAAKRLVKARLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIE 175
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
P+ +HLPSPL+A GE+EVP+R K+IP+PEGKV+WT VK+ GK
Sbjct: 176 PDNVHLPSPLTALGEFEVPLRFPKSIPMPEGKVKWTLKVKIRGK 219
>gi|224115542|ref|XP_002332160.1| predicted protein [Populus trichocarpa]
gi|222875210|gb|EEF12341.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 80/104 (76%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E+E AA+RL A+L R N K R+RESKDDPIE+ SPVTK++++ +V Q ++ IE
Sbjct: 116 KEYETAAKRLVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIE 175
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
P+ +HLPSPL+A GE+EVP+R K+IPLPEGKV+WT VK+ GK
Sbjct: 176 PDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLKVKIRGK 219
>gi|449456985|ref|XP_004146229.1| PREDICTED: 50S ribosomal protein L9-like [Cucumis sativus]
gi|449517603|ref|XP_004165835.1| PREDICTED: 50S ribosomal protein L9-like [Cucumis sativus]
Length = 218
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 80/104 (76%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E+EKAARRL++ +LVLRR + EK R+R +KD+P+ L S VT +++VA+VA Q S+ I
Sbjct: 115 KEYEKAARRLDSKQLVLRRLIDKEKFRTRAAKDEPLALQSSVTVDDIVAEVARQFSVQIA 174
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
PE L+L SPLSA GEYEVP+R K+IPLPEGKV WT VKV K
Sbjct: 175 PENLNLASPLSACGEYEVPLRFPKSIPLPEGKVYWTLKVKVRSK 218
>gi|297792663|ref|XP_002864216.1| ribosomal protein L9 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310051|gb|EFH40475.1| ribosomal protein L9 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 80/104 (76%)
Query: 2 SREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISI 61
++E+EKAA+RL NA LVLR+ + EK ++R SKDD ++ +P+TKEE+V++VA QL + I
Sbjct: 117 TKEYEKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKI 176
Query: 62 EPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHG 105
+P+ + LP+PL FGEYEVP++ KTIPLP+G VQW +KV G
Sbjct: 177 DPDNVVLPAPLETFGEYEVPLKFPKTIPLPQGTVQWILKIKVRG 220
>gi|357486623|ref|XP_003613599.1| 50S ribosomal protein L9 [Medicago truncatula]
gi|355514934|gb|AES96557.1| 50S ribosomal protein L9 [Medicago truncatula]
Length = 222
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 81/106 (76%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
+ +E+E+AA L+ A+LVLRR +++K ++RESKD+P+EL PV+K LVA+VA QL ++
Sbjct: 117 LMKEYERAALILDKAKLVLRRLIDVKKAKARESKDEPLELQIPVSKNALVAEVARQLCVN 176
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
I E LHLP+PLS GEYEVP+RL ++IPLPEGK+ W VK+ K
Sbjct: 177 ITAENLHLPTPLSTIGEYEVPLRLPRSIPLPEGKLNWALKVKIRSK 222
>gi|15237342|ref|NP_200119.1| Ribosomal protein L9/RNase H1 [Arabidopsis thaliana]
gi|8809596|dbj|BAA97147.1| unnamed protein product [Arabidopsis thaliana]
gi|27754507|gb|AAO22701.1| unknown protein [Arabidopsis thaliana]
gi|28393965|gb|AAO42390.1| unknown protein [Arabidopsis thaliana]
gi|332008917|gb|AED96300.1| Ribosomal protein L9/RNase H1 [Arabidopsis thaliana]
Length = 221
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 79/104 (75%)
Query: 2 SREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISI 61
++E+EKAA+RL NA LVLR+ + EK ++R SKDD ++ +P+TKEE+V++VA QL + I
Sbjct: 117 TKEYEKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKI 176
Query: 62 EPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHG 105
+P+ + L +PL FGEYEVP++ KTIPLP+G VQW VKV G
Sbjct: 177 DPDNVVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVRG 220
>gi|388491354|gb|AFK33743.1| unknown [Medicago truncatula]
Length = 224
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 80/106 (75%)
Query: 1 MSREFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSIS 60
+ +E+E+A L+ A+LVL R +++K ++RESKD+P+EL PV+K+ LVA+VA QL ++
Sbjct: 119 LMKEYERAGLILDKAKLVLWRLIDVKKAKARESKDEPLELQIPVSKKALVAEVARQLCVN 178
Query: 61 IEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
I E LHLP+PLS GEYEVP+RL ++IPLPEGK+ W VK+ K
Sbjct: 179 ITAENLHLPTPLSTIGEYEVPLRLPRSIPLPEGKLNWALKVKIRSK 224
>gi|225455342|ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
gi|302143920|emb|CBI23025.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E+ AA+RLE R+ RRF EK + K +P+EL SP+TK++LVA+VA QLS+ +E
Sbjct: 115 KEYHTAAKRLETTRVAFRRFIKFEKGQP-VRKGEPLELRSPITKDDLVAEVARQLSVQVE 173
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
PE LHLPSPL+ GE+EVP+RL K+IPLPEGKV+WT VK+ K
Sbjct: 174 PESLHLPSPLTHVGEFEVPLRLPKSIPLPEGKVRWTLKVKIRCK 217
>gi|255561860|ref|XP_002521939.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223538864|gb|EEF40463.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 225
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 MSREFEKAARRLENARLV--LRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLS 58
M +E+E A +RL NA+LV L N +K R+R +KD+PIE+ SP+T +++V +VA QL+
Sbjct: 118 MMKEYETAVKRLSNAQLVCGLSLRINSQKFRARATKDEPIEILSPITTDDIVKEVARQLN 177
Query: 59 ISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKV 103
+ IEP+ LHLP+PL+ FGE+ V +R K+IPLPEGKV WT +K+
Sbjct: 178 VLIEPDNLHLPAPLTTFGEHYVQLRFPKSIPLPEGKVSWTLKIKI 222
>gi|218197140|gb|EEC79567.1| hypothetical protein OsI_20717 [Oryza sativa Indica Group]
Length = 206
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 76/104 (73%), Gaps = 11/104 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E++ AA+RL+NA LVLRRF ++ EL SPVTK+E+V++VA QL+I+I
Sbjct: 114 KEYQTAAKRLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIH 162
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
P+ LHLPSPL++ GE+E+P+RL + IP PEGK+QWT VK+ K
Sbjct: 163 PDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIRRK 206
>gi|115465037|ref|NP_001056118.1| Os05g0528900 [Oryza sativa Japonica Group]
gi|52353397|gb|AAU43965.1| unknown protein [Oryza sativa Japonica Group]
gi|113579669|dbj|BAF18032.1| Os05g0528900 [Oryza sativa Japonica Group]
gi|215704236|dbj|BAG93076.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704483|dbj|BAG93917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632311|gb|EEE64443.1| hypothetical protein OsJ_19289 [Oryza sativa Japonica Group]
Length = 206
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%), Gaps = 11/104 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E++ AA+ L+NA LVLRRF ++ EL SPVTK+E+V++VA QL+I+I
Sbjct: 114 KEYQTAAKCLDNALLVLRRFISVGN-----------ELRSPVTKDEIVSEVARQLNINIH 162
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
P+ LHLPSPL++ GE+E+P+RL + IP PEGK+QWT VK+ K
Sbjct: 163 PDNLHLPSPLASLGEFELPLRLPRDIPRPEGKLQWTLTVKIRRK 206
>gi|357110948|ref|XP_003557277.1| PREDICTED: 50S ribosomal protein L9-like [Brachypodium distachyon]
Length = 202
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 75/101 (74%), Gaps = 11/101 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E++ AA+RL+NA LVLRRF + + EL +PVTK+E+V++VA QL+I+I
Sbjct: 110 KEYQAAAKRLDNALLVLRRFIS-----------EGNELRNPVTKDEIVSEVARQLNINIH 158
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKV 103
P+ +HL SPLS+ GE+E+P+RL + IP PEGK+QWT NVK+
Sbjct: 159 PDNVHLLSPLSSLGEFELPLRLPRDIPRPEGKLQWTLNVKI 199
>gi|226500942|ref|NP_001148489.1| LOC100282104 [Zea mays]
gi|195619734|gb|ACG31697.1| ribosomal protein L9, N-terminal domain containing protein [Zea
mays]
Length = 203
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 11/104 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++VA QL+I+I
Sbjct: 111 KQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIH 159
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
PE LHL SPL++ GE+E+P+RL + IP PEGK+QWT VK+ K
Sbjct: 160 PENLHLQSPLASLGEFELPLRLPQNIPCPEGKLQWTLKVKIRRK 203
>gi|223974691|gb|ACN31533.1| unknown [Zea mays]
gi|413925255|gb|AFW65187.1| ribosomal protein L9 domain containing protein [Zea mays]
Length = 203
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 11/104 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++VA QL+I+I
Sbjct: 111 KQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIH 159
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
PE LHL SPL++ GE+E+P+RL + IP PEGK+QWT VK+ K
Sbjct: 160 PENLHLHSPLASLGEFELPLRLPQNIPCPEGKLQWTLKVKIRRK 203
>gi|242082383|ref|XP_002445960.1| hypothetical protein SORBIDRAFT_07g028700 [Sorghum bicolor]
gi|241942310|gb|EES15455.1| hypothetical protein SORBIDRAFT_07g028700 [Sorghum bicolor]
Length = 203
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 11/104 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++VA QL+I+I
Sbjct: 111 KQYQAAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNITIH 159
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
PE LHL SPL++ GE+E+P+RL + IP PEGK+QWT VK+ K
Sbjct: 160 PENLHLQSPLASLGEFELPLRLPQDIPRPEGKLQWTLKVKIRRK 203
>gi|326507364|dbj|BAK03075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 74/101 (73%), Gaps = 11/101 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++ + AA+RL+NA LV+RRF + + IEL +PVTK+E++++VA QL+++I
Sbjct: 113 KQCQAAAKRLDNALLVMRRFIS-----------EGIELRNPVTKDEIISEVARQLNVNIH 161
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKV 103
P+ LH+ SPLS+ GE+E+P+RL + IP PEGK+QWT VK+
Sbjct: 162 PDNLHVVSPLSSLGEFELPLRLPRDIPRPEGKLQWTLKVKI 202
>gi|326501486|dbj|BAK02532.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 74/101 (73%), Gaps = 11/101 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++ + AA+RL+NA LV+RRF + + IEL +PVTK+E++++VA QL+++I
Sbjct: 113 KQCQAAAKRLDNALLVMRRFIS-----------EGIELRNPVTKDEIISEVARQLNVNIH 161
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKV 103
P+ LH+ SPLS+ GE+E+P+RL + IP PEGK++WT VK+
Sbjct: 162 PDNLHVVSPLSSLGEFELPLRLPRDIPRPEGKLRWTLKVKI 202
>gi|413956073|gb|AFW88722.1| hypothetical protein ZEAMMB73_949646 [Zea mays]
Length = 239
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 11/91 (12%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++VA QL+I+I
Sbjct: 151 KQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINIH 199
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEG 93
PE LHL SPL++ GE+E+P+RL + IP PEG
Sbjct: 200 PENLHLHSPLASLGEFELPLRLPQNIPCPEG 230
>gi|414588238|tpg|DAA38809.1| TPA: hypothetical protein ZEAMMB73_917517 [Zea mays]
Length = 309
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 11/93 (11%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++VA QL+I++
Sbjct: 153 KQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNINVH 201
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKV 95
E LHL SPL++ GE+E+P+RL + IP PE
Sbjct: 202 LENLHLHSPLASLGEFELPLRLPQNIPCPEASC 234
>gi|379054902|gb|AFC88842.1| 50S ribosomal protein L9-like protein, partial [Miscanthus
sinensis]
Length = 154
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 11/86 (12%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++VA QL+I+I
Sbjct: 80 KQYQAAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEVARQLNITIH 128
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTI 88
PE LHL SPL++ GE+E+P+RL + I
Sbjct: 129 PENLHLQSPLASLGEFELPLRLPQDI 154
>gi|294464294|gb|ADE77660.1| unknown [Picea sitchensis]
Length = 213
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 12/102 (11%)
Query: 4 EFEKAARRLENARLVLRRFP-NIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
E++ AARRL+ L LRR N K EL P+TKEE++A+V QL + +E
Sbjct: 121 EYKSAARRLDRGLLGLRRIVLNYGK-----------ELRFPITKEEVLAEVQRQLGVILE 169
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVH 104
E L +PS ++ G YE+P+RL K++PLP GK Q + VKV
Sbjct: 170 EENLVMPSNITMCGRYEIPLRLPKSLPLPGGKPQISLKVKVQ 211
>gi|302812223|ref|XP_002987799.1| hypothetical protein SELMODRAFT_447126 [Selaginella moellendorffii]
gi|300144418|gb|EFJ11102.1| hypothetical protein SELMODRAFT_447126 [Selaginella moellendorffii]
Length = 230
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
R+ E+ R + LVL + DP L PVT +LV +VA QL I +
Sbjct: 113 RDIERMLHRFDTRGLVLYKIIK-----------DPTTLRFPVTARDLVPEVARQLQIEVV 161
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHGK 106
+ LP PL+ G ++VP+RL +PLP GK V++ K
Sbjct: 162 ERHFDLPEPLTQLGHFQVPIRLPPDLPLPGGKRTMFLKVRIRRK 205
>gi|266619594|ref|ZP_06112529.1| ribosomal protein L9 [Clostridium hathewayi DSM 13479]
gi|288868844|gb|EFD01143.1| ribosomal protein L9 [Clostridium hathewayi DSM 13479]
Length = 148
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
V+ +E+ + +ASQLS+ I+ + L LP PL FG ++VP++L K +
Sbjct: 91 GSVSSKEIASAIASQLSLDIDKKKLVLPEPLKTFGVHKVPIKLHKEV 137
>gi|295090612|emb|CBK76719.1| LSU ribosomal protein L9P [Clostridium cf. saccharolyticum K10]
Length = 148
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNV 101
V+ +E+ V+ QL + I+ + L LP PL FG +EVP++L K +V T V
Sbjct: 91 GSVSGKEIAKAVSEQLKVEIDKKKLVLPEPLKTFGTHEVPVKLHK-------EVTGTLRV 143
Query: 102 KV 103
KV
Sbjct: 144 KV 145
>gi|412986684|emb|CCO15110.1| predicted protein [Bathycoccus prasinos]
Length = 240
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 29/40 (72%)
Query: 43 PVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPM 82
P+TK+++V +VA Q S+ ++ + + L P+ + GE++VP+
Sbjct: 180 PITKDDVVKEVAKQKSVDLDTKSIMLDKPIDSLGEFDVPL 219
>gi|295115697|emb|CBL36544.1| LSU ribosomal protein L9P [butyrate-producing bacterium SM4/1]
Length = 148
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNV 101
V+ +E+ V+ QL + I+ + L LP PL FG +EVP++L K +V T V
Sbjct: 91 GSVSGKEIAKAVSEQLRVEIDKKKLVLPEPLKTFGTHEVPVKLHK-------EVTGTLRV 143
Query: 102 KV 103
KV
Sbjct: 144 KV 145
>gi|405354018|ref|ZP_11023427.1| LSU ribosomal protein L9p [Chondromyces apiculatus DSM 436]
gi|397092709|gb|EJJ23458.1| LSU ribosomal protein L9p [Myxococcus sp. (contaminant ex DSM 436)]
Length = 147
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 36 DPIELCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
D +L VT ++ VA++ SI+ ++HLP P+ A G YEV +RL + +
Sbjct: 85 DQDKLFGSVTALDIAEAVAAE-GQSIDRRHIHLPEPIKALGNYEVELRLHRDV 136
>gi|108760815|ref|YP_633234.1| 50S ribosomal protein L9 [Myxococcus xanthus DK 1622]
gi|118574312|sp|Q1D289.1|RL9_MYXXD RecName: Full=50S ribosomal protein L9
gi|108464695|gb|ABF89880.1| ribosomal protein L9 [Myxococcus xanthus DK 1622]
Length = 147
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 36 DPIELCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
D +L VT ++ VA++ SI+ ++HLP P+ A G YEV +RL + +
Sbjct: 85 DQDKLFGSVTALDIAEAVAAE-GQSIDRRHIHLPEPIKALGNYEVELRLHRDV 136
>gi|283798578|ref|ZP_06347731.1| ribosomal protein L9 [Clostridium sp. M62/1]
gi|291073662|gb|EFE11026.1| ribosomal protein L9 [Clostridium sp. M62/1]
Length = 148
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNV 101
V+ +E+ V QL + I+ + L LP PL FG +EVP++L K +V T V
Sbjct: 91 GSVSGKEIAKAVFEQLKVEIDKKKLVLPEPLKTFGTHEVPVKLHK-------EVTGTLRV 143
Query: 102 KV 103
KV
Sbjct: 144 KV 145
>gi|358066159|ref|ZP_09152693.1| 50S ribosomal protein L9 [Clostridium hathewayi WAL-18680]
gi|356696022|gb|EHI57647.1| 50S ribosomal protein L9 [Clostridium hathewayi WAL-18680]
Length = 148
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
V+ +E+ + QL + I+ + L LP PL FG +EVP++L K +
Sbjct: 91 GSVSSKEIGKAITEQLGLDIDKKKLVLPEPLKTFGTHEVPVKLHKDV 137
>gi|323485432|ref|ZP_08090780.1| hypothetical protein HMPREF9474_02531 [Clostridium symbiosum
WAL-14163]
gi|323695080|ref|ZP_08109223.1| ribosomal protein L9 [Clostridium symbiosum WAL-14673]
gi|355625676|ref|ZP_09048370.1| 50S ribosomal protein L9 [Clostridium sp. 7_3_54FAA]
gi|323401295|gb|EGA93645.1| hypothetical protein HMPREF9474_02531 [Clostridium symbiosum
WAL-14163]
gi|323500882|gb|EGB16801.1| ribosomal protein L9 [Clostridium symbiosum WAL-14673]
gi|354821229|gb|EHF05621.1| 50S ribosomal protein L9 [Clostridium sp. 7_3_54FAA]
Length = 148
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
V+ +E+ + QL + I+ + L LP PL FG +EVP++L + +
Sbjct: 91 GSVSSKEITKAIQDQLGMEIDKKKLVLPEPLKTFGTHEVPIKLHRDV 137
>gi|302669636|ref|YP_003829596.1| 50S ribosomal protein L9 [Butyrivibrio proteoclasticus B316]
gi|302394109|gb|ADL33014.1| ribosomal protein L9 RplI [Butyrivibrio proteoclasticus B316]
Length = 148
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRL 84
V+ +E+V Q I+ + L +P P+ +FG YE+P++L
Sbjct: 91 GSVSTKEIVTAAKQQFGFDIDKKKLQMPEPIKSFGTYEIPVKL 133
>gi|116490140|ref|YP_809671.1| 50S ribosomal protein L9 [Oenococcus oeni PSU-1]
gi|118587180|ref|ZP_01544608.1| 50S ribosomal protein L9 [Oenococcus oeni ATCC BAA-1163]
gi|290889534|ref|ZP_06552624.1| hypothetical protein AWRIB429_0014 [Oenococcus oeni AWRIB429]
gi|419759173|ref|ZP_14285479.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB304]
gi|419857268|ref|ZP_14379978.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB202]
gi|419858845|ref|ZP_14381504.1| 50S ribosomal protein L9P [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421183930|ref|ZP_15641359.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB318]
gi|421186523|ref|ZP_15643914.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB418]
gi|421188518|ref|ZP_15645855.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB419]
gi|421190358|ref|ZP_15647660.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB422]
gi|421191231|ref|ZP_15648509.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB548]
gi|421192984|ref|ZP_15650236.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB553]
gi|421195795|ref|ZP_15652998.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB568]
gi|421196272|ref|ZP_15653461.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB576]
gi|122277669|sp|Q04HQ3.1|RL9_OENOB RecName: Full=50S ribosomal protein L9
gi|116090865|gb|ABJ56019.1| LSU ribosomal protein L9P [Oenococcus oeni PSU-1]
gi|118432322|gb|EAV39060.1| 50S ribosomal protein L9 [Oenococcus oeni ATCC BAA-1163]
gi|290480732|gb|EFD89366.1| hypothetical protein AWRIB429_0014 [Oenococcus oeni AWRIB429]
gi|399904095|gb|EJN91557.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB304]
gi|399964998|gb|EJN99625.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB419]
gi|399966865|gb|EJO01366.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB418]
gi|399968567|gb|EJO03000.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB318]
gi|399970261|gb|EJO04566.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB422]
gi|399972358|gb|EJO06559.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB548]
gi|399973394|gb|EJO07569.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB553]
gi|399974921|gb|EJO08990.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB568]
gi|399977472|gb|EJO11452.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB576]
gi|410497723|gb|EKP89193.1| 50S ribosomal protein L9P [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410498333|gb|EKP89789.1| 50S ribosomal protein L9P [Oenococcus oeni AWRIB202]
Length = 151
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 4 EFEKAARRLENARLVLRRFPNIEKLRSRESKDDPI-ELCSPVTKEELVAKVASQLSISIE 62
E +KAA LE A+ + + + + + P L VT +E+ ++A Q +++++
Sbjct: 54 EAKKAAEILEEAKQLKNKLASTKTIVQFSEHVGPDGRLNGSVTAKEIADQLAKQFNLTVD 113
Query: 63 PEYLHLPSPLSAFGEYEVPMRL 84
L LP P+ G +EVP +L
Sbjct: 114 KRKLQLPQPIKTIGLHEVPAKL 135
>gi|413956074|gb|AFW88723.1| hypothetical protein ZEAMMB73_949646 [Zea mays]
Length = 350
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 11/55 (20%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQL 57
++++ AA+RL+NA LVLRRF + EL +PVTK+E+V++ + L
Sbjct: 151 KQYQTAAKRLDNALLVLRRFISTGN-----------ELRTPVTKDEIVSEFSHDL 194
>gi|338536296|ref|YP_004669630.1| 50S ribosomal protein L9 [Myxococcus fulvus HW-1]
gi|337262392|gb|AEI68552.1| 50S ribosomal protein L9 [Myxococcus fulvus HW-1]
Length = 147
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 40 LCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
L VT ++ VA++ SI+ ++HLP P+ A G YEV +RL + +
Sbjct: 89 LFGSVTALDIAEAVAAE-GQSIDRRHIHLPEPIKALGNYEVELRLHREV 136
>gi|420157741|ref|ZP_14664569.1| ribosomal protein L9 [Clostridium sp. MSTE9]
gi|394755569|gb|EJF38768.1| ribosomal protein L9 [Clostridium sp. MSTE9]
Length = 150
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 40 LCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIP 89
L VT +E+ + Q + ++ + LP + AFG YE +RL +++
Sbjct: 89 LFGSVTAKEIAEAIKKQFGVDVDKRKIELPGDIKAFGTYECEVRLHQSVT 138
>gi|34557658|ref|NP_907473.1| 50S ribosomal protein L9 [Wolinella succinogenes DSM 1740]
gi|81832889|sp|Q7M8Z5.1|RL9_WOLSU RecName: Full=50S ribosomal protein L9
gi|34483375|emb|CAE10373.1| 50S RIBOSOMAL PROTEIN L9 [Wolinella succinogenes]
Length = 150
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
R EK A+ LE + V + ++ L+ + L +TKE+L A + +Q I ++
Sbjct: 53 RRAEKEAQELERLKNVAKELASV-TLKIVQKVGANGSLYGAITKEDLSAALMAQKGIEVD 111
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKTI 88
+ L +P+ + G YE+ ++L I
Sbjct: 112 KKSFELKTPIKSTGIYEIEVKLGHGI 137
>gi|451981706|ref|ZP_21930054.1| 50S ribosomal protein L9 [Nitrospina gracilis 3/211]
gi|451761054|emb|CCQ91319.1| 50S ribosomal protein L9 [Nitrospina gracilis 3/211]
Length = 169
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 25 IEKLRSRESK--DDPIELCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPM 82
I KLR + SK D +L VT +E+ V +Q + I+ + L P+ A GE+EVP+
Sbjct: 72 IGKLRIQVSKKVGDQGKLFGSVTSQEIADLVEAQ-GVQIDRRKIQLSDPIKALGEFEVPL 130
Query: 83 RL 84
+L
Sbjct: 131 KL 132
>gi|145354350|ref|XP_001421450.1| Putative mitochondrial ribosomal protein L9A, imported to
mitochondria [Ostreococcus lucimarinus CCE9901]
gi|144581687|gb|ABO99743.1| Putative mitochondrial ribosomal protein L9A, imported to
mitochondria [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 44 VTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPM 82
VT+E +V ++ Q S+++ P L L P+ FGEY++P+
Sbjct: 131 VTRENIVEEIRRQKSLNLTPGALMLERPIVDFGEYDIPL 169
>gi|416115285|ref|ZP_11594051.1| LSU ribosomal protein L9p [Campylobacter concisus UNSWCD]
gi|384577825|gb|EIF07100.1| LSU ribosomal protein L9p [Campylobacter concisus UNSWCD]
Length = 148
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPI---------ELCSPVTKEELVAKV 53
R++E A +R A + N+EKL+ SK + L V+KEE+ A++
Sbjct: 45 RQYEAAQKR--KAEELKYEIANLEKLKEELSKVTVVVKKTLGANGSLFGSVSKEEIAAEL 102
Query: 54 ASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHG 105
+ +E + + L + L A G Y+V ++L +I T V V G
Sbjct: 103 EKTHHLVVEKKAIDLDTHLKAVGLYDVSIKLGHSI-------NATLKVDVQG 147
>gi|410582461|ref|ZP_11319567.1| LSU ribosomal protein L9P [Thermaerobacter subterraneus DSM 13965]
gi|410505281|gb|EKP94790.1| LSU ribosomal protein L9P [Thermaerobacter subterraneus DSM 13965]
Length = 149
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 7 KAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEPEYL 66
+A + LE AR + +R + R + L VT +++V +A + I+ + +
Sbjct: 57 RARQELEQARSLAQRLDG-RAVEVRARAGESGRLFGSVTSQDVVEALARTFGVKIDRKRV 115
Query: 67 HLPSPLSAFGEYEVPMRL 84
LP PL G Y+V +RL
Sbjct: 116 ELPEPLRQLGSYDVVLRL 133
>gi|440794040|gb|ELR15211.1| ribosomal protein L9, Nterminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 185
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIE 62
+E KA +RL ++++R I +++ + L +PVT + +V K+ Q I +
Sbjct: 98 QELAKAKKRLSKVEVLMKR--QIIQVQPEQI------LHAPVTADNIVEKLWLQHKIQLA 149
Query: 63 PEYLHLPSPLSAFGEYEVPMRLSKT-IPL 90
+ L L +P+S G + VP++L +PL
Sbjct: 150 KDQLDLEAPISQLGTFSVPVKLEDIDVPL 178
>gi|347533597|ref|YP_004840360.1| 50S ribosomal protein L9 [Roseburia hominis A2-183]
gi|345503745|gb|AEN98428.1| 50S ribosomal protein L9 [Roseburia hominis A2-183]
Length = 155
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNV 101
V+ +E+ A QL + ++ + + LP P+ +FG EV +RL P KV TF V
Sbjct: 98 GSVSTKEIAAAAKEQLGMELDKKKMQLPEPIRSFGMTEVAIRLH---P----KVTGTFTV 150
Query: 102 KV 103
V
Sbjct: 151 HV 152
>gi|419720226|ref|ZP_14247469.1| ribosomal protein L9 [Lachnoanaerobaculum saburreum F0468]
gi|383303594|gb|EIC95036.1| ribosomal protein L9 [Lachnoanaerobaculum saburreum F0468]
Length = 148
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 8 AARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEPEYLH 67
A +LE AR + + N S +S D S V+ +E+ + +QL + I+ + L
Sbjct: 58 AKEKLEAARELAAKLNNANISLSIKSGKDGRAFGS-VSSKEIEEAIKAQLGLEIDKKKLV 116
Query: 68 LPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKV 103
+ P+ FG +EV ++L K V NVKV
Sbjct: 117 IAEPIKTFGNHEVKVKLHKD-------VTAGLNVKV 145
>gi|302384748|ref|YP_003820570.1| 50S ribosomal protein L9 [Clostridium saccharolyticum WM1]
gi|302195376|gb|ADL02947.1| ribosomal protein L9 [Clostridium saccharolyticum WM1]
Length = 148
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIP 89
V+ +E+ + +QL I+ + L L PL FG +EVP++L K +
Sbjct: 91 GSVSGKEISIAIKNQLGYDIDKKKLILSEPLKTFGSHEVPVKLHKDVT 138
>gi|315453299|ref|YP_004073569.1| 50S ribosomal protein L9 [Helicobacter felis ATCC 49179]
gi|315132351|emb|CBY82979.1| 50S ribosomal protein L9 [Helicobacter felis ATCC 49179]
Length = 148
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 40 LCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
L +TKEE+V + +Q S+ I+ + L L +P+ + G YE+ ++L +
Sbjct: 89 LFGSITKEEVVEALRAQHSLEIDKKTLELKTPIKSTGIYEIEVKLGAGV 137
>gi|315651989|ref|ZP_07904991.1| 50S ribosomal protein L9 [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485818|gb|EFU76198.1| 50S ribosomal protein L9 [Lachnoanaerobaculum saburreum DSM 3986]
Length = 148
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 8 AARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEPEYLH 67
A +LE AR + + N S +S D S V+ +E+ + +QL + I+ + L
Sbjct: 58 AKEKLEAARELAAKLNNASISLSIKSGKDGRAFGS-VSSKEIEEAIKAQLGLEIDKKKLV 116
Query: 68 LPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKV 103
+ P+ FG +EV ++L K V NVKV
Sbjct: 117 IAEPIKTFGNHEVKVKLHKD-------VTAGLNVKV 145
>gi|237752723|ref|ZP_04583203.1| 50s ribosomal protein l9 [Helicobacter winghamensis ATCC BAA-430]
gi|229376212|gb|EEO26303.1| 50s ribosomal protein l9 [Helicobacter winghamensis ATCC BAA-430]
Length = 149
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 5 FEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEPE 64
E AA+++E L + ++K+ + S L +TKE++ +A + I I+ +
Sbjct: 66 MEMAAKKIEEVTLKI-----VQKVGANGS------LYGAITKEDIAESLAKEHRIEIDKK 114
Query: 65 YLHLPSPLSAFGEYEVPMRLSKTI 88
+ L SP+ + G YEV ++L I
Sbjct: 115 TIELKSPIKSTGVYEVEIKLGHGI 138
>gi|166030701|ref|ZP_02233530.1| hypothetical protein DORFOR_00375 [Dorea formicigenerans ATCC
27755]
gi|346308707|ref|ZP_08850817.1| 50S ribosomal protein L9 [Dorea formicigenerans 4_6_53AFAA]
gi|166029493|gb|EDR48250.1| ribosomal protein L9 [Dorea formicigenerans ATCC 27755]
gi|345902364|gb|EGX72145.1| 50S ribosomal protein L9 [Dorea formicigenerans 4_6_53AFAA]
Length = 149
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRL 84
V+ +E+ A+V SQL + ++ + + L P+ + G + VP++L
Sbjct: 91 GSVSSKEIAAEVKSQLGLEVDKKKVQLKDPIKSLGTHNVPIKL 133
>gi|313672070|ref|YP_004050181.1| 50S ribosomal protein L9 [Calditerrivibrio nitroreducens DSM 19672]
gi|312938826|gb|ADR18018.1| LSU ribosomal protein L9P [Calditerrivibrio nitroreducens DSM
19672]
Length = 148
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 4 EFEKAARRLENARLVLRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEP 63
E +K A +L L+L+R EK R L +T E +A+ ++ I+I+
Sbjct: 64 EAKKVAEKLNGTNLILKRKAG-EKGR----------LFGAITNTE-IAEELEKIGITIDK 111
Query: 64 EYLHLPSPLSAFGEYEVPMRLSKTIP 89
+++ L +P+ GEY++ + L K I
Sbjct: 112 KHIDLKNPIKELGEYKIKVNLYKEIK 137
>gi|157164966|ref|YP_001466811.1| 50S ribosomal protein L9 [Campylobacter concisus 13826]
gi|365153088|ref|ZP_09349532.1| 50S ribosomal protein L9 [Campylobacter sp. 10_1_50]
gi|166223787|sp|A7ZDF3.1|RL9_CAMC1 RecName: Full=50S ribosomal protein L9
gi|112801338|gb|EAT98682.1| ribosomal protein L9 [Campylobacter concisus 13826]
gi|363652404|gb|EHL91444.1| 50S ribosomal protein L9 [Campylobacter sp. 10_1_50]
Length = 148
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLRSRESKDDPI---------ELCSPVTKEELVAKV 53
R++E A +R A + N+EKL+ +K + L V+KEE+ A++
Sbjct: 45 RQYEAAQKR--KAEELKYEIANLEKLKEELAKVTVVVKKTLGANGSLFGSVSKEEIAAEL 102
Query: 54 ASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNVKVHG 105
+ +E + + L + L A G Y+V ++L +I T V V G
Sbjct: 103 EKTHHLVVEKKAIDLDTHLKAVGLYDVSIKLGHSI-------NATLKVDVQG 147
>gi|291561878|emb|CBL40679.1| LSU ribosomal protein L9P [butyrate-producing bacterium SS3/4]
Length = 148
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTI 88
V+ +E+ QL + I+ + + LP P+ + G +EVP++L K +
Sbjct: 91 GSVSTKEIAKAAKDQLKLDIDKKKMVLPEPIKSIGSFEVPIKLHKEV 137
>gi|404493639|ref|YP_006717745.1| 50S ribosomal protein L9 [Pelobacter carbinolicus DSM 2380]
gi|115305539|sp|Q3A320.1|RL9_PELCD RecName: Full=50S ribosomal protein L9
gi|77545675|gb|ABA89237.1| ribosomal protein L9 [Pelobacter carbinolicus DSM 2380]
Length = 148
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 3 REFEKAARRLENARLVLRRFPNIEKLR---SRESKDDPIELCSPVTKEELVAKVASQLSI 59
R+ E A+++ A V++ IEK+ + + DD +L VT E+ AK+A +
Sbjct: 52 RQLEHKAQKVLQASEVVK--AQIEKVTCEFALRAGDDG-KLFGSVTSMEIQAKLAES-GV 107
Query: 60 SIEPEYLHLPSPLSAFGEYEVPMRL 84
++ + + L P+ A GEYEV ++L
Sbjct: 108 EVDRKKIQLDEPIKALGEYEVAVKL 132
>gi|134080241|emb|CAK97144.1| unnamed protein product [Aspergillus niger]
Length = 931
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 19 LRRFPNIEKLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEY 78
L+ EKL RE + I V + L+ + +LSI EP+YLH S L A G++
Sbjct: 270 LKNISRAEKLDLREHLVETIGATQSVIMDALIQPLQEELSIEYEPDYLH--SLLHAVGKF 327
Query: 79 EVPM 82
+P
Sbjct: 328 GLPF 331
>gi|260893965|ref|YP_003240062.1| 50S ribosomal protein L9 [Ammonifex degensii KC4]
gi|260866106|gb|ACX53212.1| ribosomal protein L9 [Ammonifex degensii KC4]
Length = 148
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 27 KLRSRESKDDPIELCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLS 85
K+R+ E +L VT +E+ A +A +L I+ + + L SP+ G Y V +RL+
Sbjct: 80 KVRAGEGG----KLFGAVTAKEIAAAIAQELGTEIDKKQVMLESPIKEIGTYTVEVRLA 134
>gi|339442220|ref|YP_004708225.1| hypothetical protein CXIVA_11570 [Clostridium sp. SY8519]
gi|338901621|dbj|BAK47123.1| hypothetical protein CXIVA_11570 [Clostridium sp. SY8519]
Length = 148
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 40 LCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRL 84
+ V+ +E+ QLS++++ + + L P+ A G YEVP++L
Sbjct: 89 IFGSVSTKEIAEAAKEQLSLTLDKKKMVLSDPIKALGTYEVPIKL 133
>gi|444909607|ref|ZP_21229797.1| LSU ribosomal protein L9p [Cystobacter fuscus DSM 2262]
gi|444719979|gb|ELW60766.1| LSU ribosomal protein L9p [Cystobacter fuscus DSM 2262]
Length = 148
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 40 LCSPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIP 89
L VT ++ +A+Q S++ LHL P+ A G+YEV +RL + +
Sbjct: 89 LYGSVTVLDIAEALAAQ-GQSVDRRQLHLAEPIKATGQYEVELRLHREVT 137
>gi|291537121|emb|CBL10233.1| LSU ribosomal protein L9P [Roseburia intestinalis M50/1]
Length = 148
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 42 SPVTKEELVAKVASQLSISIEPEYLHLPSPLSAFGEYEVPMRLSKTIPLPEGKVQWTFNV 101
V+ +E+ A +QL + ++ + + LP P+ FG EV ++L P KV FNV
Sbjct: 91 GSVSTKEIAAAAKAQLGMELDKKKMQLPEPIRTFGVTEVAIKLH---P----KVVGKFNV 143
Query: 102 KV 103
V
Sbjct: 144 HV 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,580,008,143
Number of Sequences: 23463169
Number of extensions: 57742462
Number of successful extensions: 149152
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 149083
Number of HSP's gapped (non-prelim): 83
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)