Query 047114
Match_columns 116
No_of_seqs 103 out of 1052
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 07:46:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047114.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047114hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01960 nsLTP1 nsLTP1: Non-spe 99.9 2.8E-26 6.1E-31 148.5 4.9 87 26-112 2-89 (89)
2 cd04660 nsLTP_like nsLTP_like: 99.6 4.6E-16 9.9E-21 97.4 1.9 67 27-102 1-69 (73)
3 cd00010 AAI_LTSS AAI_LTSS: Alp 99.6 2E-15 4.4E-20 91.4 3.3 61 34-99 1-63 (63)
4 PF14368 LTP_2: Probable lipid 99.6 3.9E-16 8.4E-21 101.2 -0.6 72 23-103 18-93 (96)
5 cd01959 nsLTP2 nsLTP2: Non-spe 99.5 1.8E-14 4E-19 88.8 2.4 59 32-102 4-64 (66)
6 smart00499 AAI Plant lipid tra 99.1 9E-11 2E-15 72.3 3.4 70 27-103 1-76 (79)
7 PF00234 Tryp_alpha_amyl: Prot 99.1 2.2E-12 4.7E-17 82.9 -5.1 67 32-111 13-90 (90)
8 PF14547 Hydrophob_seed: Hydro 95.6 0.0067 1.5E-07 39.0 1.6 78 27-112 2-85 (85)
9 cd01958 HPS_like HPS_like: Hyd 93.6 0.047 1E-06 35.1 1.7 76 26-111 3-85 (85)
10 cd00261 AAI_SS AAI_SS: Alpha-A 54.6 2.7 5.9E-05 27.4 -0.9 62 32-101 13-104 (110)
11 PF05617 Prolamin_like: Prolam 32.2 37 0.00079 20.1 1.7 28 34-61 9-41 (70)
No 1
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.93 E-value=2.8e-26 Score=148.52 Aligned_cols=87 Identities=44% Similarity=1.017 Sum_probs=81.0
Q ss_pred CChhhhcCccCChHhhhCCCCCCCccchhhhhhhhhhcccccchhhhcccccccCCCC-CCCHHHHhhcccccCCCCCCC
Q 047114 26 SCSEAVTTLMPCVPFVVGSDPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPAL-GAKPEKAKQLPGLCGIKVPVP 104 (116)
Q Consensus 26 ~C~~~~~~L~pC~~yl~g~~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l-~i~~~~a~~LP~~Cgv~~~~~ 104 (116)
+|..+...|.||++|++|+..+|+++||++++++++.++|..+++++|+|+++....+ +||.+|+.+||++||++++|+
T Consensus 2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~~~~ 81 (89)
T cd01960 2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSIPYP 81 (89)
T ss_pred CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCCCCC
Confidence 6899999999999999985468999999999999999999999999999999876777 599999999999999999999
Q ss_pred CCCCCCcC
Q 047114 105 IDPNIDCN 112 (116)
Q Consensus 105 is~~~dC~ 112 (116)
|+++|||+
T Consensus 82 i~~~~dC~ 89 (89)
T cd01960 82 ISPSTDCS 89 (89)
T ss_pred CCCCCCCC
Confidence 99999996
No 2
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.58 E-value=4.6e-16 Score=97.41 Aligned_cols=67 Identities=31% Similarity=0.730 Sum_probs=53.9
Q ss_pred ChhhhcCccCChHhhhCCC--CCCCccchhhhhhhhhhcccccchhhhcccccccCCCCCCCHHHHhhcccccCCCCC
Q 047114 27 CSEAVTTLMPCVPFVVGSD--PRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPALGAKPEKAKQLPGLCGIKVP 102 (116)
Q Consensus 27 C~~~~~~L~pC~~yl~g~~--~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l~i~~~~a~~LP~~Cgv~~~ 102 (116)
|+.....|.||++|+++++ .+||+.||++++++ +++|+|.+++..... .||.++|.+||++||+++|
T Consensus 1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~--------~~~C~C~~~~~~~~~-~i~~~~a~~Lp~~Cgv~~p 69 (73)
T cd04660 1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA--------DLPCLCRYKTSLVLQ-IIDPDKAVYLPAKCGLPLP 69 (73)
T ss_pred CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC--------CcCCEeeccCCCccc-ccCHHHHHHHHHHcCCCCC
Confidence 5555677899999999753 36899999999984 567998887752111 5999999999999999988
No 3
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.56 E-value=2e-15 Score=91.39 Aligned_cols=61 Identities=36% Similarity=0.890 Sum_probs=52.0
Q ss_pred ccCChHhhhCCCCCCCccchhhhhhhhhhcccccchhhhcccccccCCCC-CC-CHHHHhhcccccCC
Q 047114 34 LMPCVPFVVGSDPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPAL-GA-KPEKAKQLPGLCGI 99 (116)
Q Consensus 34 L~pC~~yl~g~~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l-~i-~~~~a~~LP~~Cgv 99 (116)
|.||++|++|+..+||++||++++++++. ++.|+|+++++..... ++ |.+++.+||++||+
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~-----~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKS-----DPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhc-----ChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 57999999985468999999999999764 7899999999854443 55 79999999999996
No 4
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.55 E-value=3.9e-16 Score=101.17 Aligned_cols=72 Identities=39% Similarity=0.898 Sum_probs=49.0
Q ss_pred ccCCChhhhcCccCC---hHhhhCCCCCCCccchhhhhhhhhhcccccchhhhcccccccC-CCCCCCHHHHhhcccccC
Q 047114 23 HAMSCSEAVTTLMPC---VPFVVGSDPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAG-PALGAKPEKAKQLPGLCG 98 (116)
Q Consensus 23 ~~~~C~~~~~~L~pC---~~yl~g~~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~-~~l~i~~~~a~~LP~~Cg 98 (116)
...+|.. .|.|| ..|+.++ ..||++||++++++.+. ++.|+|+++++.. ..+++|.+|+.+||++||
T Consensus 18 ~~~~c~~---~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~-----~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg 88 (96)
T PF14368_consen 18 CCCSCAN---SLLPCCPCLCYVTGG-PAPSAACCSALKSVVQA-----DPPCLCQLLNSPGAPGFGINVTRALALPAACG 88 (96)
T ss_dssp BTTB-HC---CCCHH--HHHHHCC------HHHHHHHCC---------HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCT
T ss_pred CcchhHH---HHhccccchhccCCC-CCCCHHHHHHHHHhccC-----CCCCHHHhcCccccccCCcCHHHHHHHHHHcC
Confidence 3345644 57766 7888865 78999999999998653 7899999999854 445899999999999999
Q ss_pred CCCCC
Q 047114 99 IKVPV 103 (116)
Q Consensus 99 v~~~~ 103 (116)
++.+.
T Consensus 89 ~~~~~ 93 (96)
T PF14368_consen 89 VPVPP 93 (96)
T ss_dssp SS-S-
T ss_pred CCCCC
Confidence 99883
No 5
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.47 E-value=1.8e-14 Score=88.75 Aligned_cols=59 Identities=34% Similarity=0.824 Sum_probs=51.5
Q ss_pred cCccCChHhhhCCCCCCCccchhhhhhhhhhcccccchhhhcccccccCCCC--CCCHHHHhhcccccCCCCC
Q 047114 32 TTLMPCVPFVVGSDPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPAL--GAKPEKAKQLPGLCGIKVP 102 (116)
Q Consensus 32 ~~L~pC~~yl~g~~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l--~i~~~~a~~LP~~Cgv~~~ 102 (116)
.+|.+|++|++++ .+||++||+.+|+ +..|||+++++ +.| .||.++|.+||++||+++|
T Consensus 4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~---------~~~CLC~y~~~--p~l~~~i~~~~A~~l~~~Cgv~~P 64 (66)
T cd01959 4 TQLSPCLPAILGG-SPPSAACCAKLKE---------QQSCLCQYAKN--PSLKQYVNSPNARKVLAACGVPYP 64 (66)
T ss_pred hhcccCHHHHhCC-CCCCHHHHHHHhc---------CCCCeeeeecC--ccHHhhcCcHHHHHHHHHcCCCCC
Confidence 5799999999977 6899999999998 34899999987 334 4899999999999999986
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.09 E-value=9e-11 Score=72.29 Aligned_cols=70 Identities=26% Similarity=0.699 Sum_probs=55.8
Q ss_pred ChhhhcCccCChHhhhCC--CCCCCccchhhhhhhhhhcccccchhhhcccccccCCCC-C---CCHHHHhhcccccCCC
Q 047114 27 CSEAVTTLMPCVPFVVGS--DPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPAL-G---AKPEKAKQLPGLCGIK 100 (116)
Q Consensus 27 C~~~~~~L~pC~~yl~g~--~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l-~---i~~~~a~~LP~~Cgv~ 100 (116)
|..+...+.+|.+|++++ ...|+.+||++++.+. +..|+|..++...... . ++..++.+||+.||+.
T Consensus 1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~-------~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~ 73 (79)
T smart00499 1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN-------SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVP 73 (79)
T ss_pred ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc-------ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCC
Confidence 556666777999999974 3678999999999984 4579998887644333 2 5899999999999998
Q ss_pred CCC
Q 047114 101 VPV 103 (116)
Q Consensus 101 ~~~ 103 (116)
.++
T Consensus 74 ~~~ 76 (79)
T smart00499 74 PPY 76 (79)
T ss_pred CCC
Confidence 874
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=99.05 E-value=2.2e-12 Score=82.90 Aligned_cols=67 Identities=27% Similarity=0.783 Sum_probs=55.4
Q ss_pred cCccCChHhhhCCCCCCCccchhhhhhhhhhcccccchhhhcccccccCCC-----------CCCCHHHHhhcccccCCC
Q 047114 32 TTLMPCVPFVVGSDPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPA-----------LGAKPEKAKQLPGLCGIK 100 (116)
Q Consensus 32 ~~L~pC~~yl~g~~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~-----------l~i~~~~a~~LP~~Cgv~ 100 (116)
..+.+|.+|++++...|+..||++|+.+ ++.|.|..++..+.. .+++..+|.+||+.||++
T Consensus 13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l--------~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~ 84 (90)
T PF00234_consen 13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL--------DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVS 84 (90)
T ss_dssp SHHHGGHHHHTTSSSHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSS
T ss_pred ccccccHHHHhcccccchHHHhHHHHHH--------hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCC
Confidence 4578999999985357999999999998 678999999865443 158899999999999999
Q ss_pred CCCCCCCCCCc
Q 047114 101 VPVPIDPNIDC 111 (116)
Q Consensus 101 ~~~~is~~~dC 111 (116)
+++ +||
T Consensus 85 ~~~-----~~C 90 (90)
T PF00234_consen 85 PPY-----TDC 90 (90)
T ss_dssp SSS-----S-G
T ss_pred CCC-----CCC
Confidence 996 666
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=95.63 E-value=0.0067 Score=39.02 Aligned_cols=78 Identities=21% Similarity=0.438 Sum_probs=50.3
Q ss_pred ChhhhcCccCChHhhh--C-C-CCCCCccchhhhhhhhhhcccccchhhhcccccccCCC-CCCCHH-HHhhcccccCCC
Q 047114 27 CSEAVTTLMPCVPFVV--G-S-DPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPA-LGAKPE-KAKQLPGLCGIK 100 (116)
Q Consensus 27 C~~~~~~L~pC~~yl~--g-~-~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~-l~i~~~-~a~~LP~~Cgv~ 100 (116)
|.....+|.-|.+.+. + . ..++..+||.-++.+.+. ....|+|.-+|...-. +.++.+ ....|-..||..
T Consensus 2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~----~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~ 77 (85)
T PF14547_consen 2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADL----DAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKT 77 (85)
T ss_pred CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccc----hHHHHHHHHHhhhcccccccccccHHHHHHHHhCCc
Confidence 4443446777888872 1 1 135789999999999654 2346888888753222 233333 345578889998
Q ss_pred CCCCCCCCCCcC
Q 047114 101 VPVPIDPNIDCN 112 (116)
Q Consensus 101 ~~~~is~~~dC~ 112 (116)
.| .+++|.
T Consensus 78 ~p----~gf~C~ 85 (85)
T PF14547_consen 78 VP----SGFTCP 85 (85)
T ss_pred Cc----CCCcCC
Confidence 87 678874
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=93.56 E-value=0.047 Score=35.13 Aligned_cols=76 Identities=24% Similarity=0.472 Sum_probs=48.3
Q ss_pred CChhhhcCccCChHhhhC-C---CCCCCccchhhhhhhhhhcccccchhhhcccccccCCCCCCC--HH-HHhhcccccC
Q 047114 26 SCSEAVTTLMPCVPFVVG-S---DPRPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPALGAK--PE-KAKQLPGLCG 98 (116)
Q Consensus 26 ~C~~~~~~L~pC~~yl~g-~---~~~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l~i~--~~-~a~~LP~~Cg 98 (116)
.|.....++.-|..-+.. . ..+|..+||.-++.+.+. ....|+|.-+|. +-+||+ .+ +..-|-..||
T Consensus 3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dl----dAA~CLCtaika--n~lgi~~~~pv~l~llln~CG 76 (85)
T cd01958 3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADL----DAAVCLCTAIKA--NILGISINIPVALSLLLNSCG 76 (85)
T ss_pred CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhh----heeeeeeeeeec--cccCcccccChhHHHHHHHHc
Confidence 354444456677776642 1 146779999999999764 234688888774 334443 33 3444567899
Q ss_pred CCCCCCCCCCCCc
Q 047114 99 IKVPVPIDPNIDC 111 (116)
Q Consensus 99 v~~~~~is~~~dC 111 (116)
...| +++.|
T Consensus 77 k~~P----~gf~C 85 (85)
T cd01958 77 RNVP----PGFTC 85 (85)
T ss_pred CcCC----CCCcC
Confidence 9988 56665
No 10
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=54.56 E-value=2.7 Score=27.37 Aligned_cols=62 Identities=18% Similarity=0.435 Sum_probs=41.2
Q ss_pred cCccCChHhhhC---CCC-----------CCCccchhhhhhhhhhcccccchhhhcccccccCCCC--------------
Q 047114 32 TTLMPCVPFVVG---SDP-----------RPTASCCLGVKTVNDQATTKEDRRALCECLKKAGPAL-------------- 83 (116)
Q Consensus 32 ~~L~pC~~yl~g---~~~-----------~Ps~~CC~~l~~l~~~~~t~~~~~clC~cl~~~~~~l-------------- 83 (116)
..|.+|..|+.- +.. .....||..++.+ +..|-|.-+...+...
T Consensus 13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i--------~~qcrC~al~~~~~~~~~~~~~~~~~~~~~ 84 (110)
T cd00261 13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI--------PEQCRCEALRQMVQGVIQQQQQQQEQQQGQ 84 (110)
T ss_pred ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC--------cHhhhHHHHHHHHHHHHHhhhccccccCcC
Confidence 357889999872 111 1236899999987 5578887776422211
Q ss_pred --CCCHHHHhhcccccCCCC
Q 047114 84 --GAKPEKAKQLPGLCGIKV 101 (116)
Q Consensus 84 --~i~~~~a~~LP~~Cgv~~ 101 (116)
..-...|..||..||+..
T Consensus 85 ~~~~~~~~a~~Lp~~C~~~~ 104 (110)
T cd00261 85 EVERMRQAAQNLPSMCNLYP 104 (110)
T ss_pred hHHHHHHHHHhhchhcCCCC
Confidence 123457889999999986
No 11
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=32.25 E-value=37 Score=20.09 Aligned_cols=28 Identities=14% Similarity=0.395 Sum_probs=18.5
Q ss_pred ccCChHhhh-----CCCCCCCccchhhhhhhhh
Q 047114 34 LMPCVPFVV-----GSDPRPTASCCLGVKTVND 61 (116)
Q Consensus 34 L~pC~~yl~-----g~~~~Ps~~CC~~l~~l~~ 61 (116)
...|...+. |.....+++||.++..+.+
T Consensus 9 ~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~ 41 (70)
T PF05617_consen 9 SPGCGDEIFNSFFNGNKKNIGPECCKAINKMGK 41 (70)
T ss_pred ccchHHHHHHHHHcCCCCCCChHHHHHHHHHhH
Confidence 345665554 2225789999999998743
Done!