Query 047119
Match_columns 233
No_of_seqs 139 out of 684
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 13:30:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047119.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047119hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z3q_A Thaumatin-like protein; 100.0 2.9E-86 9.9E-91 568.5 13.7 200 25-233 1-200 (200)
2 1du5_A Zeamatin; beta sandwich 100.0 6.9E-86 2.4E-90 568.6 11.8 204 25-233 1-206 (206)
3 1aun_A PR-5D; antifungal prote 100.0 5.3E-85 1.8E-89 563.9 13.6 201 24-233 1-206 (208)
4 2ahn_A Thaumatin-like protein; 100.0 2.3E-84 7.8E-89 565.2 14.0 204 25-233 1-222 (222)
5 2vhk_A Thaumatin-I; kinetics o 100.0 1.6E-83 5.6E-88 553.6 14.4 198 25-233 1-205 (206)
6 3g7m_A Xylanase inhibitor TL-X 100.0 2.2E-54 7.7E-59 356.2 12.3 143 25-233 1-151 (151)
7 3gd0_A Laminaripentaose-produc 92.7 0.52 1.8E-05 43.4 9.4 103 22-138 4-147 (367)
8 3gd0_A Laminaripentaose-produc 79.9 2 6.7E-05 39.6 4.9 42 192-233 319-365 (367)
9 4aor_D Trypsin inhibitor 3; hy 71.7 1.3 4.4E-05 27.2 0.9 14 170-183 11-24 (37)
10 4ep8_B Urease subunit beta; al 46.0 32 0.0011 26.0 4.8 51 21-72 18-93 (101)
11 2hrv_A 2A cysteine proteinase; 40.5 8.4 0.00029 30.9 0.9 18 82-99 97-114 (142)
12 1z8r_A Coxsackievirus B4 polyp 39.6 10 0.00035 31.1 1.3 18 82-99 117-134 (166)
13 4ubp_B Protein (urease (chain 36.3 50 0.0017 25.8 4.7 51 21-72 24-99 (126)
14 4ac7_B Urease subunit beta; hy 36.3 50 0.0017 25.8 4.7 51 21-72 24-99 (126)
15 1lm8_V VHL, VON hippel-lindau 28.8 80 0.0027 25.5 5.0 37 22-58 16-57 (160)
16 4ajy_V VON hippel-lindau disea 28.2 82 0.0028 25.6 5.0 36 23-58 20-60 (163)
17 3kmh_A D-lyxose isomerase; cup 23.0 79 0.0027 27.4 4.1 26 44-73 171-196 (246)
18 3qga_A UREA2, fusion of urease 20.5 1.3E+02 0.0043 25.8 4.8 51 21-72 123-198 (225)
No 1
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata}
Probab=100.00 E-value=2.9e-86 Score=568.49 Aligned_cols=200 Identities=58% Similarity=1.226 Sum_probs=194.1
Q ss_pred eEEEEEeCCCCceeeeecCCCCeeecCCceEEEEcCCCCCCcceeeeeecccCCCCCCCCcCCCCCCCCceeccCCCCCC
Q 047119 25 TVFEVQNNCSYTVWAAANPSGGRELYQGQSWIVNTDPNFNDIGRIWARINCRFNVSNGTGKCESGDCNGVLYCVSDGAPP 104 (233)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p~~g~~L~~G~s~s~~vp~~~w~sGriW~RtgC~~~~~~g~~~C~TGdCgg~l~C~~~g~pp 104 (233)
++|||+|+|+||||||++|++|++|+|||++++++|++ |++|||||||||++|++ |+++|+||||+|.|+|++.|+||
T Consensus 1 ~t~ti~N~C~~tVWp~~~p~gG~~L~~G~s~~~~~p~~-w~~GRiWgRTgC~fd~~-g~~~C~TGdCgg~l~C~g~g~pP 78 (200)
T 1z3q_A 1 ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAG-TTGGRIWGRTGCSFDGS-GRGRCQTGDCGGVLSCTAYGNPP 78 (200)
T ss_dssp CEEEEEECSSSCEEEEEETTEEEEECTTCEEEEECCTT-CCSEEEEEEEEEEECTT-SBEEEEESCCTTBSSCSSCCCSS
T ss_pred CEEEEEeCCCCCeeceEeCCCCcccCCCCeEEEeCCCc-ccccceeccccCCCCCC-CCccccccCcCCeeecCCCCCCC
Confidence 58999999999999999999999999999999999999 86799999999999988 99999999999999999988999
Q ss_pred cceeEEEeeCCCCccceeeecccccCCceeeeecCCCccCCccCccccccCCCcCCccCCCccCCccccCCCCcccCCCC
Q 047119 105 VILAEYSFQGVNNMGFFDVSVVDGFNVPIEFKGTSSGCNKVIKCRGDINGLCPTELRHPGGCNHPCSVLKNDQFCCTCSN 184 (233)
Q Consensus 105 aTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~P~~g~C~~~~~C~~dln~~CP~~l~~~~gC~S~C~~~~~~~~CC~g~~ 184 (233)
+|||||+|++.+++|||||||||||||||+|+|+++.| +.++|.+|||+.||.||||++||+|+|++|++|||||+|
T Consensus 79 aTLaEftL~~~~~~dfYDVSlVDGfNlP~~i~P~~g~C-~~~~C~~dln~~CP~~L~v~~gC~saC~af~~~~yCC~g-- 155 (200)
T 1z3q_A 79 NTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGC-RGIRCAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNS-- 155 (200)
T ss_dssp CCEEEEEEEETTTEEEEEEECTTCBSSCEEEEESSSSS-CCEEECSCHHHHCCTTTEETTEECCHHHHHCCHHHHCTT--
T ss_pred cceEEEEecCCCCCceeeeeeeccccCCeeeeeCCCCC-CccccccchhhhCCHHHcccCcccCcccccCCCcccCCC--
Confidence 99999999987789999999999999999999998889 999999999999999999999999999999999999998
Q ss_pred CCCCCCCCChhhHHHHHhhCcccccccCCCCCceeecCCCCceEEEecC
Q 047119 185 STATNCGPTTAYFKIFKDLCPDAYSYALDDATSTFTCPTGTDYKVVFCP 233 (233)
Q Consensus 185 ~~~~~C~p~~~ys~~fK~~CP~AYsya~Dd~~st~tC~~~~~y~VtFCP 233 (233)
++|+|+ +||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 156 ---~~C~pt-~ys~~FK~~CP~AYsya~DD~tstftC~~~~~y~vtFCP 200 (200)
T 1z3q_A 156 ---GACSPT-DYSQFFKRNCPDAYSYPKDDQTTTFTCPGGTNYRVVFCP 200 (200)
T ss_dssp ---SCCCCC-HHHHHHHHHCTTEECSTTCCSSCCEEEETTCCEEEEECC
T ss_pred ---CCCCch-hHHHHHHhcCcccccCCCCCCCcCeECCCCCCEEEEeCC
Confidence 699999 999999999999999999999999999988999999998
No 2
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1
Probab=100.00 E-value=6.9e-86 Score=568.64 Aligned_cols=204 Identities=52% Similarity=1.113 Sum_probs=196.0
Q ss_pred eEEEEEeCCCCceeeeecC-CCCeeecCCceEEEEcCCCCCCcceeeeeecccCCCCCCCCcCCCCCCCCceeccCCCCC
Q 047119 25 TVFEVQNNCSYTVWAAANP-SGGRELYQGQSWIVNTDPNFNDIGRIWARINCRFNVSNGTGKCESGDCNGVLYCVSDGAP 103 (233)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p-~~g~~L~~G~s~s~~vp~~~w~sGriW~RtgC~~~~~~g~~~C~TGdCgg~l~C~~~g~p 103 (233)
++|||+|+|+||||||++| ++|++|+|||++++++|++.| +|||||||||++|++ |+++|+||||+|.|+|++.|.|
T Consensus 1 ~tfti~N~C~~tVWp~~~p~~gG~~L~~G~s~s~~vp~~~w-sGRiWgRTgC~fd~~-g~~~C~TGdCgg~l~C~g~g~p 78 (206)
T 1du5_A 1 AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTT-AARIWARTGCKFDAS-GRGSCRTGDCGGVLQCTGYGRA 78 (206)
T ss_dssp CEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTTCC-SEEEEEECSEEECTT-SBEEESSSCCTTBSSCCSCCCS
T ss_pred CEEEEEeCCCCCcCCeEecCCCCEecCCCCeEEEECCCCCc-ccceecccccCCCCC-CCccccccCCCCeeecCCCCCC
Confidence 5899999999999999998 789999999999999999845 999999999999988 9999999999999999998899
Q ss_pred CcceeEEEeeCCCCccceeeecccccCCceeeeecCC-CccCCccCccccccCCCcCCccCCCccCCccccCCCCcccCC
Q 047119 104 PVILAEYSFQGVNNMGFFDVSVVDGFNVPIEFKGTSS-GCNKVIKCRGDINGLCPTELRHPGGCNHPCSVLKNDQFCCTC 182 (233)
Q Consensus 104 paTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~P~~g-~C~~~~~C~~dln~~CP~~l~~~~gC~S~C~~~~~~~~CC~g 182 (233)
|+|||||+|++.+++|||||||||||||||+|+|+++ .|.+.++|.+|||+.||.|||+++||+|+|++|++|||||+|
T Consensus 79 PaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~C~~~~~C~~dln~~CP~~L~v~~gC~saC~~f~~~~yCC~g 158 (206)
T 1du5_A 79 PNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVG 158 (206)
T ss_dssp SCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSSSCCCCCEECSCTTTTCCGGGEETTEECCHHHHHCCHHHHCCG
T ss_pred cceeeEEEeccCCCCceeeeeeecccccCEEEecCCCCCCcCCCcccccchhhCCHHHhhccccCChhhccCCCcccccC
Confidence 9999999999877899999999999999999999986 787889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHhhCcccccccCCCCCceeecCCCCceEEEecC
Q 047119 183 SNSTATNCGPTTAYFKIFKDLCPDAYSYALDDATSTFTCPTGTDYKVVFCP 233 (233)
Q Consensus 183 ~~~~~~~C~p~~~ys~~fK~~CP~AYsya~Dd~~st~tC~~~~~y~VtFCP 233 (233)
+|++ +|+|+ +||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 159 ~~~~--~C~pt-~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~vtFCP 206 (206)
T 1du5_A 159 SAAN--DCHPT-NYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206 (206)
T ss_dssp GGGG--GCCCC-HHHHHHHHHCTTSBSSTTCHHHHCEEEETTCCEEEEECC
T ss_pred CCCC--cCCcc-hHHHHHHhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 9976 99999 999999999999999999999999999998999999998
No 3
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A
Probab=100.00 E-value=5.3e-85 Score=563.86 Aligned_cols=201 Identities=55% Similarity=1.133 Sum_probs=193.0
Q ss_pred ceEEEEEeCCCCceeeeecC-CCCeeecCCceEEEEcCCCCCCcceeeeeecccCCCCCCCCcCCCCCCCCceeccCCCC
Q 047119 24 ATVFEVQNNCSYTVWAAANP-SGGRELYQGQSWIVNTDPNFNDIGRIWARINCRFNVSNGTGKCESGDCNGVLYCVSDGA 102 (233)
Q Consensus 24 a~t~tv~N~C~~tVwp~~~p-~~g~~L~~G~s~s~~vp~~~w~sGriW~RtgC~~~~~~g~~~C~TGdCgg~l~C~~~g~ 102 (233)
+++|||+|+|+||||||++| ++|++|+|||++++++|++ |++|||||||+|+||++ |+++|+||||+|.|+|++.|+
T Consensus 1 ~~t~ti~N~C~~tVWp~~~p~~gG~~L~~G~s~~~~~p~~-w~~GRiWgRTgC~fd~~-g~~~C~TGdCgg~l~C~g~g~ 78 (208)
T 1aun_A 1 SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPG-TKMARIWGRTNCNFDGA-GRGWCQTGDCGGVLECKGWGK 78 (208)
T ss_dssp CCEEEEEECSSSCEEEEEETTTEEEEECTTCEEEEECCTT-CCSEEEEEEEEEEECTT-SBEEEEESCCTTBSSCSSCCC
T ss_pred CcEEEEEeCCCCCcCCeEecCCCCeeCCCCCeEEEECCCC-CcccceecccccCCCCC-CCcccccCCcCceeecCCCCC
Confidence 46999999999999999998 7899999999999999999 86799999999999987 999999999999999999889
Q ss_pred CCcceeEEEeeCCCCccceeeecccccCCceeeeecC---CCccCCccCccccccCCCcCCccCCCccCCccccCCCCcc
Q 047119 103 PPVILAEYSFQGVNNMGFFDVSVVDGFNVPIEFKGTS---SGCNKVIKCRGDINGLCPTELRHPGGCNHPCSVLKNDQFC 179 (233)
Q Consensus 103 ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~P~~---g~C~~~~~C~~dln~~CP~~l~~~~gC~S~C~~~~~~~~C 179 (233)
||+|||||+|++.+++|||||||||||||||+|+|++ +.| +.++|.+|||+.||.||||++||+|+|++|++||||
T Consensus 79 pPaTLaEftl~~~~~~dfYDVSlVDGfNlP~~i~P~~~g~g~C-~~~~C~~dln~~CP~~L~v~~~C~saC~af~~~~yC 157 (208)
T 1aun_A 79 PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKC-HGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYC 157 (208)
T ss_dssp SSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTC-SCEEECSCHHHHCCTTTEETTEECCHHHHTCSHHHH
T ss_pred CCcceEEEEecCCCCCceeeeecccCcccCeeeeeCCCCCCCC-CcccccCcchhhCCHHHcccccccCHhhhcCCCccc
Confidence 9999999999987789999999999999999999984 579 999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCChhhHHHHHhhCcccccccCCCCCceeecCC-CCceEEEecC
Q 047119 180 CTCSNSTATNCGPTTAYFKIFKDLCPDAYSYALDDATSTFTCPT-GTDYKVVFCP 233 (233)
Q Consensus 180 C~g~~~~~~~C~p~~~ys~~fK~~CP~AYsya~Dd~~st~tC~~-~~~y~VtFCP 233 (233)
|+| ++|+|+ +||++||++||+||+|||||++|+|+|++ +++|+|||||
T Consensus 158 C~g-----~~C~pt-~ys~~FK~~CP~AYsya~DD~tstftC~~~~~~y~vtFCP 206 (208)
T 1aun_A 158 CTQ-----GPCGPT-ELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 206 (208)
T ss_dssp CTT-----SCCCCC-HHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred ccC-----CCCCcc-hHHHHHHhcCcccccCCCCCCCcCeECCCCCCCEEEEeCC
Confidence 998 699999 99999999999999999999999999998 8999999998
No 4
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium}
Probab=100.00 E-value=2.3e-84 Score=565.16 Aligned_cols=204 Identities=39% Similarity=0.858 Sum_probs=194.9
Q ss_pred eEEEEEeCCCCceeeeecC--------CCCeeecCCceEEEEcCCCCCCcceeeeeecccCCCCCCCCcCCCCCCC-Cce
Q 047119 25 TVFEVQNNCSYTVWAAANP--------SGGRELYQGQSWIVNTDPNFNDIGRIWARINCRFNVSNGTGKCESGDCN-GVL 95 (233)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~p--------~~g~~L~~G~s~s~~vp~~~w~sGriW~RtgC~~~~~~g~~~C~TGdCg-g~l 95 (233)
++|||+|+|+||||||+++ ++|++|+||+++++.+|++ | +|||||||+|++|+. |+++|+||||+ |.|
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~-W-sGRiWgRTgC~~d~~-g~~~C~TGdCgsg~l 77 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVP-W-NGRFWARTGCSTDAS-GKFVCATADCASGQV 77 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSS-E-EEEEEEEEEEEECTT-SCEEEEESCCCSSSS
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCC-c-ceeEEeccccCCCCC-CCcccccCCccCCce
Confidence 5899999999999999863 5799999999999999999 9 899999999999987 99999999999 999
Q ss_pred eccC-CCCCCcceeEEEeeCCCCccceeeecccccCCceeeeecC--CCccCCccCccccccCCCcCCccC---C---Cc
Q 047119 96 YCVS-DGAPPVILAEYSFQGVNNMGFFDVSVVDGFNVPIEFKGTS--SGCNKVIKCRGDINGLCPTELRHP---G---GC 166 (233)
Q Consensus 96 ~C~~-~g~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~P~~--g~C~~~~~C~~dln~~CP~~l~~~---~---gC 166 (233)
+|++ .+.||+|||||+|++.+++|||||||||||||||+|+|++ +.| +.++|.+|||..||.|||++ + ||
T Consensus 78 ~C~g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C-~~~~C~~dln~~CP~eL~v~~~~G~~v~C 156 (222)
T 2ahn_A 78 MCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDC-KTASCPANVNAVCPSELQKKGSDGSVVAC 156 (222)
T ss_dssp SCTTCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCC-CCEEECSCGGGGCCGGGEEECTTSCEEEE
T ss_pred ecCCCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCc-ccCcccCchhhhCCHHHeeecCCCcEecc
Confidence 9998 6699999999999987789999999999999999999987 579 99999999999999999985 2 79
Q ss_pred cCCccccCCCCcccCCCCCCCCCCCCChhhHHHHHhhCcccccccCCCCCceeecCCCCceEEEecC
Q 047119 167 NHPCSVLKNDQFCCTCSNSTATNCGPTTAYFKIFKDLCPDAYSYALDDATSTFTCPTGTDYKVVFCP 233 (233)
Q Consensus 167 ~S~C~~~~~~~~CC~g~~~~~~~C~p~~~ys~~fK~~CP~AYsya~Dd~~st~tC~~~~~y~VtFCP 233 (233)
+|+|++|++|||||+|+|++|++|+|+ +||++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus 157 ~saC~af~~~~yCC~g~~~~p~~C~pt-~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP 222 (222)
T 2ahn_A 157 LSACVKFGTPQYCCTPPQNTPETCPPT-NYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222 (222)
T ss_dssp CCHHHHHCCHHHHCCTTSCSTTTSCCC-HHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred cccccccCCCccccCCCCCCCCCCCcc-hHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence 999999999999999999999999999 999999999999999999999999999998999999998
No 5
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ...
Probab=100.00 E-value=1.6e-83 Score=553.62 Aligned_cols=198 Identities=50% Similarity=1.142 Sum_probs=189.5
Q ss_pred eEEEEEeCCCCceeeeec------CCCCeeecCCceEEEEcCCCCCCcceeeeeecccCCCCCCCCcCCCCCCCCceecc
Q 047119 25 TVFEVQNNCSYTVWAAAN------PSGGRELYQGQSWIVNTDPNFNDIGRIWARINCRFNVSNGTGKCESGDCNGVLYCV 98 (233)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~------p~~g~~L~~G~s~s~~vp~~~w~sGriW~RtgC~~~~~~g~~~C~TGdCgg~l~C~ 98 (233)
++|||+|+|+||||||++ |++|++|+||+++++.+|++.| +|||||||+|+||++ |+++|+||||+|.|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~g~~~l~~gG~~L~~G~s~~~~vp~~~w-sGRiWgRTgC~fd~~-g~~~C~TGdCgg~l~C~ 78 (206)
T 2vhk_A 1 ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTN-GGKIWARTDCYFDDS-GSGICKTGDCGGLLRCK 78 (206)
T ss_dssp CEEEEEECSSSCEEEEEECSSSEEEEEEEEECTTCEEEEECCTTCC-SEEEEEEBSCEECTT-SBEECSBSCCTTBSSCS
T ss_pred CEEEEEeCCCCCcCCEEcCCCCcCCCCCeecCCCCEEEEECCCCCc-ccceeccccCCCCCC-CCcccccCCCCceeecC
Confidence 589999999999999997 4689999999999999999855 999999999999988 99999999999999999
Q ss_pred CCCCCCcceeEEEeeCCCCccceeeecccccCCceeeeecCCCccCCccCccccccCCCcCCccCC-CccCCccccCCCC
Q 047119 99 SDGAPPVILAEYSFQGVNNMGFFDVSVVDGFNVPIEFKGTSSGCNKVIKCRGDINGLCPTELRHPG-GCNHPCSVLKNDQ 177 (233)
Q Consensus 99 ~~g~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~P~~g~C~~~~~C~~dln~~CP~~l~~~~-gC~S~C~~~~~~~ 177 (233)
+.|+||+|||||+|++.++ |||||||||||||||+|+|+++.| +.++|.+|||+.||+|||+++ ||+|+|++|++||
T Consensus 79 g~g~pPaTLaEftl~~~~~-dfYDVSlVDGfNlP~~i~p~~g~C-~~~~C~~dln~~CP~eL~v~~~~C~saC~af~~~~ 156 (206)
T 2vhk_A 79 RFGRPPTTLAEFSLNQYGK-DYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSE 156 (206)
T ss_dssp SCCCSSCCEEEEEEEETTE-EEEEEECTTCBSSCEEEEESSSSC-CCEEECSCHHHHCCGGGBCTTSSBCCHHHHHCCHH
T ss_pred CCCCCCcceEEEEeccCCC-ceeeeeccCCccCCEEeeeCCCCC-CccccccchhhhCCHHHeeccccccChhhccCCCc
Confidence 9889999999999997656 999999999999999999998899 999999999999999999987 9999999999999
Q ss_pred cccCCCCCCCCCCCCChhhHHHHHhhCcccccccCCCCCceeecCCCCceEEEecC
Q 047119 178 FCCTCSNSTATNCGPTTAYFKIFKDLCPDAYSYALDDATSTFTCPTGTDYKVVFCP 233 (233)
Q Consensus 178 ~CC~g~~~~~~~C~p~~~ys~~fK~~CP~AYsya~Dd~~st~tC~~~~~y~VtFCP 233 (233)
|||+| ++|+|+ +||++||++||+||+|||||++| |+|+++++|+|||||
T Consensus 157 yCC~g-----~~C~pt-~ys~~FK~~CP~AYsya~Dd~ts-ftC~~~~~Y~VtFCP 205 (206)
T 2vhk_A 157 YCCTT-----GKCGPT-EYSRFFKRLCPDAFSYVLDKPTT-VTCPGSSNYRVTFCP 205 (206)
T ss_dssp HHTTT-----SCCCCC-HHHHHHHHHCTTSBCSTTSCCCC-EEEETTCCEEEEESC
T ss_pred ccccC-----CCCCcc-hhHHHHHhhCcccccCCCCCCCc-eecCCCCCEEEEeCC
Confidence 99998 699999 99999999999999999999999 999998999999998
No 6
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum}
Probab=100.00 E-value=2.2e-54 Score=356.20 Aligned_cols=143 Identities=34% Similarity=0.739 Sum_probs=128.8
Q ss_pred eEEEEEeCCCCceeeeec----C-CCCeeecCCceEEEEcCCCCCCcceeeeeecccCCCCCCCCcCCCCCC-CCceecc
Q 047119 25 TVFEVQNNCSYTVWAAAN----P-SGGRELYQGQSWIVNTDPNFNDIGRIWARINCRFNVSNGTGKCESGDC-NGVLYCV 98 (233)
Q Consensus 25 ~t~tv~N~C~~tVwp~~~----p-~~g~~L~~G~s~s~~vp~~~w~sGriW~RtgC~~~~~~g~~~C~TGdC-gg~l~C~ 98 (233)
++|||+|+|+||||||++ | ++||+|+||+++++.+|++ | +|||||||+|+||++ |+++|+|||| +|.|+|+
T Consensus 1 ~tfti~N~C~~tVWp~~~~~~~p~~gG~~L~~g~s~~~~~p~~-w-sGRiWgRTgC~fd~~-g~~~C~TGdCg~g~l~C~ 77 (151)
T 3g7m_A 1 APLTITNRCHFTVWPAVALVLAQGGGGTELHPGASWSLDTPVI-G-SQYIWGRTGCSFDRA-GKGRCQTGDCGGSSLTCG 77 (151)
T ss_dssp CCEEEEECSSSCEEEEEEETTSSCCEECCBCTTCEEEECCCSS-E-EEEEEEEESCEECSS-CCEECSBSCSSTTSCCSC
T ss_pred CEEEEEeCCCCCccCeeccCCCCCCCCeEcCCCCeEEEECCCC-C-cceeecccCCCCCCC-CCcccccCCccCCccccc
Confidence 479999999999999998 6 6899999999999999999 9 899999999999988 9999999999 7999999
Q ss_pred CCCCCCcceeEEEeeCCCCccceeeecc-cccCCceeeeecCCCccCCccCccccccCCCcCCccCCCccCCccccCCCC
Q 047119 99 SDGAPPVILAEYSFQGVNNMGFFDVSVV-DGFNVPIEFKGTSSGCNKVIKCRGDINGLCPTELRHPGGCNHPCSVLKNDQ 177 (233)
Q Consensus 99 ~~g~ppaTlaEftl~~~~~~d~YDVSlV-dG~NlP~~i~P~~g~C~~~~~C~~dln~~CP~~l~~~~gC~S~C~~~~~~~ 177 (233)
+.|+||+|||||+|+ +++|||||||| |||||||+|+|+++. ..
T Consensus 78 ~~g~pPaTlaEftl~--~~~d~YDVSlV~dG~NlP~~i~P~~g~---~~------------------------------- 121 (151)
T 3g7m_A 78 GNPAVPTTMAEVSVL--QGNYTYGVTSTLKGFNVPMNLKCSSGD---AL------------------------------- 121 (151)
T ss_dssp SCCCSSCCEEEEEEC--SSEEEEEEESSSSCCSSCEEEEESSSC---CE-------------------------------
T ss_pred CCCCCCceeEEEEcc--CCCceEEEEeccCCCCCCeEEEeCCCC---cC-------------------------------
Confidence 888999999999998 37999999999 999999999998741 11
Q ss_pred cccCCCCCCCCCCCCChhhHHHHHhhCcccccccCCCCCceeecCCCCc-eEEEecC
Q 047119 178 FCCTCSNSTATNCGPTTAYFKIFKDLCPDAYSYALDDATSTFTCPTGTD-YKVVFCP 233 (233)
Q Consensus 178 ~CC~g~~~~~~~C~p~~~ys~~fK~~CP~AYsya~Dd~~st~tC~~~~~-y~VtFCP 233 (233)
.|+. ..||+||.|+ +.|+..++ |+|||||
T Consensus 122 -----------~C~~---------~gC~dAy~~p-------~aC~~~~~~~~vtFCp 151 (151)
T 3g7m_A 122 -----------PCRK---------AGCDVVQPYA-------KSCSAAGSRLQIVFCP 151 (151)
T ss_dssp -----------EECS---------TTCCSSSCCE-------EEEECTTCCEEEEECC
T ss_pred -----------cCCC---------CCCCccccCC-------CcCCCCCCceEEEeCC
Confidence 2332 3799999888 79999887 9999998
No 7
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=92.71 E-value=0.52 Score=43.44 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=63.2
Q ss_pred ccceEEEEEeCCCC--ceeeeec---C----------------------------CCCeee-cCCceEEEEcCCCCCCcc
Q 047119 22 IDATVFEVQNNCSY--TVWAAAN---P----------------------------SGGREL-YQGQSWIVNTDPNFNDIG 67 (233)
Q Consensus 22 a~a~t~tv~N~C~~--tVwp~~~---p----------------------------~~g~~L-~~G~s~s~~vp~~~w~sG 67 (233)
...-.|+|+|+=.. .||..++ + +-...| .+|++.+++||.- +|
T Consensus 4 ~~tlpl~l~Nns~~~~~Vy~yi~G~d~~~g~~~~v~~dG~~~p~~~~~~~~~~~~d~aI~l~~~G~s~ti~iP~~---sG 80 (367)
T 3gd0_A 4 PATIPLTITNNSGRAEQIHIYNLGTELSSGRQGWADASGAFHPWPAGGNPPTPAPDASIPGPAPGRSTTIQIPKF---SG 80 (367)
T ss_dssp CSEEEEEEEECSCCCSCEEEEEEEEETTTCCEEEECTTCCEEECCCCCSSCEECCCCCEECCCTTCEEEEEEESE---EE
T ss_pred CCceeEEEEeCCCCCCcEEEEEEeEeCCCCcEEEEeCCCcEecCCcccCCCCCCcceeEECCCCCCceEEEccCc---Cc
Confidence 45678999999974 5887642 1 012344 3577889999973 89
Q ss_pred eeeeeecccCCCCCCCCcCCCCCCCCceeccC---CCCC----CcceeEEEeeCCCCccceeeecccccCCceeeeec
Q 047119 68 RIWARINCRFNVSNGTGKCESGDCNGVLYCVS---DGAP----PVILAEYSFQGVNNMGFFDVSVVDGFNVPIEFKGT 138 (233)
Q Consensus 68 riW~RtgC~~~~~~g~~~C~TGdCgg~l~C~~---~g~p----paTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~P~ 138 (233)
|||=..|=. =.|.=..| | +.-.. ..-| --.-+|||++. ..-|-++|.||-|.+||.|+-.
T Consensus 81 RIyfS~g~~-----L~f~~~~~---g-lv~Ps~~NpsDPN~~~~~~f~EfT~n~--~gl~~N~S~VD~~~~Pl~l~l~ 147 (367)
T 3gd0_A 81 RIYFSYGRK-----MEFRLTTG---G-LVQPAVQNPTDPNRDILFNWSEYTLND--SGLWINSTQVDMFSAPYTVGVR 147 (367)
T ss_dssp EEEEEESSC-----CCCEEETT---E-ECCCCTTSTTCTTTTSCEEEEEEEEET--TEEEEECCCSSEECSCEEEEEE
T ss_pred eEEEEcCCc-----cEEEecCC---C-ccCCCCCCCCCCCCCceeeEEEEEecC--cceecccceeccccCceEEEEE
Confidence 999444311 11221111 1 11111 0112 22348999994 4678999999999999999643
No 8
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A*
Probab=79.87 E-value=2 Score=39.60 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=31.6
Q ss_pred CChhhHHHHHhhCc--ccccccCCCC---CceeecCCCCceEEEecC
Q 047119 192 PTTAYFKIFKDLCP--DAYSYALDDA---TSTFTCPTGTDYKVVFCP 233 (233)
Q Consensus 192 p~~~ys~~fK~~CP--~AYsya~Dd~---~st~tC~~~~~y~VtFCP 233 (233)
|++.|++++++.=. .||.|||||- +++..-.....++||.-|
T Consensus 319 ptNhYar~vH~~~~dg~~YaF~YDDV~~qs~~v~~~~P~~ltitl~~ 365 (367)
T 3gd0_A 319 VTNHYARIIHAHMADGKAYGFAFDDVGHHESLVHDGDPRGASLTLDP 365 (367)
T ss_dssp SSCHHHHHHHHHBTTSCCCCSTTTTTTTCSCEEEESSCSEEEEEECC
T ss_pred CccHHHHHHHHhccCCCeeeCCccCCCCccccccCCCCCEEEEEEcC
Confidence 55699999998855 7899999973 355556666778887654
No 9
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=71.65 E-value=1.3 Score=27.20 Aligned_cols=14 Identities=29% Similarity=0.771 Sum_probs=12.0
Q ss_pred ccccCCCCcccCCC
Q 047119 170 CSVLKNDQFCCTCS 183 (233)
Q Consensus 170 C~~~~~~~~CC~g~ 183 (233)
|..|+.++|||+|.
T Consensus 11 c~~f~~p~~ccsg~ 24 (37)
T 4aor_D 11 CSGFGPPEQCCSGA 24 (37)
T ss_dssp ECTTSCGGGBTTSC
T ss_pred cCCCCCcccccccc
Confidence 66789999999985
No 10
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=46.01 E-value=32 Score=25.96 Aligned_cols=51 Identities=12% Similarity=0.078 Sum_probs=36.1
Q ss_pred cccceEEEEEeCCCCceeeeec------------------------C-CCCeeecCCceEEEEcCCCCCCcceeeee
Q 047119 21 SIDATVFEVQNNCSYTVWAAAN------------------------P-SGGRELYQGQSWIVNTDPNFNDIGRIWAR 72 (233)
Q Consensus 21 ~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~vp~~~w~sGriW~R 72 (233)
+....+++|.|.-.-+|.+|+. | ++..+.+||+++++++-+- =...+|+|-
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~~-~G~r~v~Gf 93 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVAF-AGHRAVFGF 93 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEEC-CTTCEECST
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEEc-cCceEEEcC
Confidence 4456899999999999999962 1 3456779999999986432 013456554
No 11
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=40.49 E-value=8.4 Score=30.86 Aligned_cols=18 Identities=56% Similarity=1.289 Sum_probs=15.7
Q ss_pred CCCcCCCCCCCCceeccC
Q 047119 82 GTGKCESGDCNGVLYCVS 99 (233)
Q Consensus 82 g~~~C~TGdCgg~l~C~~ 99 (233)
|.+.|+-|||||.|.|..
T Consensus 97 g~G~~epGDCGG~L~C~H 114 (142)
T 2hrv_A 97 GEGPCEPGDCGGKLLCKH 114 (142)
T ss_dssp EECCCCTTCTTCEEEETT
T ss_pred EEcCCCCCCCCceeeeCC
Confidence 557899999999999974
No 12
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=39.57 E-value=10 Score=31.13 Aligned_cols=18 Identities=44% Similarity=0.813 Sum_probs=15.8
Q ss_pred CCCcCCCCCCCCceeccC
Q 047119 82 GTGKCESGDCNGVLYCVS 99 (233)
Q Consensus 82 g~~~C~TGdCgg~l~C~~ 99 (233)
|.+.|+-|||||.|.|+.
T Consensus 117 ~~G~~epGDCGG~L~C~H 134 (166)
T 1z8r_A 117 ATGFSEPGDAGGILRCEH 134 (166)
T ss_dssp EECSSSCCCCBSEEECSS
T ss_pred EecCCCCCCCCceeeeCC
Confidence 557899999999999985
No 13
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=36.33 E-value=50 Score=25.84 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=35.8
Q ss_pred cccceEEEEEeCCCCceeeeec------------------------C-CCCeeecCCceEEEEcCCCCCCcceeeee
Q 047119 21 SIDATVFEVQNNCSYTVWAAAN------------------------P-SGGRELYQGQSWIVNTDPNFNDIGRIWAR 72 (233)
Q Consensus 21 ~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~vp~~~w~sGriW~R 72 (233)
+....+|+|.|.=.-+|.+|+. | ++..+.+||+++++++-+- =...+|+|-
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~-~G~r~v~G~ 99 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTEL-GGNREVFGI 99 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEEC-CTTCEECST
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEEc-cCCeEEeCc
Confidence 4456899999999999999962 2 3456789999999986432 013455543
No 14
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=36.33 E-value=50 Score=25.84 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=35.8
Q ss_pred cccceEEEEEeCCCCceeeeec------------------------C-CCCeeecCCceEEEEcCCCCCCcceeeee
Q 047119 21 SIDATVFEVQNNCSYTVWAAAN------------------------P-SGGRELYQGQSWIVNTDPNFNDIGRIWAR 72 (233)
Q Consensus 21 ~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~vp~~~w~sGriW~R 72 (233)
+....+|+|.|.=.-+|.+|+. | ++..+.+||+++++++-+- =...+|+|-
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~-~G~r~v~G~ 99 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTEL-GGNREVFGI 99 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEEC-CTTCEECST
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEEc-cCCeEEeCc
Confidence 4456899999999999999962 2 3456789999999986432 013455543
No 15
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=28.79 E-value=80 Score=25.55 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=28.6
Q ss_pred ccceEEEEEeCCCCceeeeecCCCC-----eeecCCceEEEE
Q 047119 22 IDATVFEVQNNCSYTVWAAANPSGG-----RELYQGQSWIVN 58 (233)
Q Consensus 22 a~a~t~tv~N~C~~tVwp~~~p~~g-----~~L~~G~s~s~~ 58 (233)
.....|+|+|+.+.+|-+-++--.| ..|+||+.+.+.
T Consensus 16 ~~~~~V~FvN~s~~~V~v~WIDy~G~~v~Y~~L~PG~~~~q~ 57 (160)
T 1lm8_V 16 REPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIH 57 (160)
T ss_dssp CCEEEEEEEECSSSCEEEEEECTTSCEEECCCBCTTEEEEEE
T ss_pred CceEEEEEEeCCCCeEEEEEECCCCCEEEeeeeCCCCEEeCC
Confidence 3468999999999999888764222 359999988775
No 16
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=28.25 E-value=82 Score=25.58 Aligned_cols=36 Identities=14% Similarity=0.071 Sum_probs=28.5
Q ss_pred cceEEEEEeCCCCceeeeecCCCC-----eeecCCceEEEE
Q 047119 23 DATVFEVQNNCSYTVWAAANPSGG-----RELYQGQSWIVN 58 (233)
Q Consensus 23 ~a~t~tv~N~C~~tVwp~~~p~~g-----~~L~~G~s~s~~ 58 (233)
....++|+|+++.+|-+-++--.| ..|+||+.+.+.
T Consensus 20 ~~~~V~FvN~s~~~V~v~WIDy~G~~~~Y~tL~PG~~~~~~ 60 (163)
T 4ajy_V 20 EPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIH 60 (163)
T ss_dssp CEEEEEEEECSSSCEEEEEECTTSCEEECCCBCTTEEEEEE
T ss_pred ceEEEEEEeCCCCeEEEEEECCCCCEEEeeeeCCCCeEEec
Confidence 467999999999999888764222 389999988775
No 17
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=23.00 E-value=79 Score=27.38 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=17.8
Q ss_pred CCCeeecCCceEEEEcCCCCCCcceeeeee
Q 047119 44 SGGRELYQGQSWIVNTDPNFNDIGRIWARI 73 (233)
Q Consensus 44 ~~g~~L~~G~s~s~~vp~~~w~sGriW~Rt 73 (233)
+.-.+|.||++.++. .+.| -++||..
T Consensus 171 G~~i~L~PGESiTl~--Pg~~--H~F~ae~ 196 (246)
T 3kmh_A 171 GSQLRLSPGESICLP--PGLY--HSFWAEA 196 (246)
T ss_dssp TCEEEECTTCEEEEC--TTEE--EEEEECT
T ss_pred CCEEEECCCCeEecC--CCCE--EEEEecC
Confidence 344689999987764 4425 6788764
No 18
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=20.47 E-value=1.3e+02 Score=25.76 Aligned_cols=51 Identities=16% Similarity=0.192 Sum_probs=35.8
Q ss_pred cccceEEEEEeCCCCceeeeec------------------------C-CCCeeecCCceEEEEcCCCCCCcceeeee
Q 047119 21 SIDATVFEVQNNCSYTVWAAAN------------------------P-SGGRELYQGQSWIVNTDPNFNDIGRIWAR 72 (233)
Q Consensus 21 ~a~a~t~tv~N~C~~tVwp~~~------------------------p-~~g~~L~~G~s~s~~vp~~~w~sGriW~R 72 (233)
+-...+++|.|.=.-+|.+|+. | ++..+.+||+++++++-+- =...+|+|-
T Consensus 123 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~~-gG~r~v~G~ 198 (225)
T 3qga_A 123 GKEITELKVTNKGPKSLHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLIPI-GGSKKIIGM 198 (225)
T ss_dssp TCCCEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEEC-STTCEECST
T ss_pred CCceEEEEEEECCCCceeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEEEc-cCCeEEeCC
Confidence 4456899999999999999962 2 3456779999999985432 013455543
Done!