BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047120
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/594 (65%), Positives = 480/594 (80%), Gaps = 4/594 (0%)
Query: 13 STQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIF 72
S ST+ +L CKT +DVNQIH R+I TG IKN++LTT++V +F+SS L +FAR +F
Sbjct: 11 SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 73 FKYH----AFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKA 128
+YH +F E +DPFLWNA+IK++SHG DP++AL++ CLML+NGVSVDKFS SLVLKA
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKA 130
Query: 129 CSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSY 188
CSRLG ++ G+QIHG L+K SDLFLQNCLI LY++CG L +RQ+FD+M RDSVSY
Sbjct: 131 CSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY 190
Query: 189 NSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPER 248
NSMIDGYVK G I SARELFD MP+ +NLISWNS+++GYAQ G+ A ++F MPE+
Sbjct: 191 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 249 DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMP 308
DLISWNSM+ G VK G+++DA+ LFD MP+RDVV+WA MIDGYAKLG V A+ LFD+MP
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
RDVVA N+MM GYV+N Y M+ALEIF +M+ E +L PDD +LVIVL AIAQLG + K +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 369 AIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHG 428
+H Y+ + QF L GK GVALIDMYSKCGSI++A+ VFE IE+ S+DHWNAMI GLAIHG
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 429 LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHY 488
LGE AFD+L+++ERLS++PDDITF G+LNAC+H+GLVKEGLLCFELMRR HK+EP LQHY
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 489 GCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDS 548
GCMVDIL R+G IE A+NLIE+MP+EPNDVIWRT L+AC +++ GE VAKHLI
Sbjct: 491 GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAG 550
Query: 549 SNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFV 602
N SSYVLLSNM+A GMW D RRVR+MMKER ++K+PGCSWIEL+G VHEFFV
Sbjct: 551 YNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/619 (38%), Positives = 354/619 (57%), Gaps = 24/619 (3%)
Query: 12 NSTQSTLL------LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLT 65
NST S +L LL KCK L + QI A+MI G I + +++L+A + S
Sbjct: 45 NSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE----- 99
Query: 66 EFARYIFFKYHAFREKKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGV---SVDKF 120
+RY+ + + ++P F WN I+ +S +PKE+ +++ ML +G D F
Sbjct: 100 --SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 157
Query: 121 SASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKM 180
+ ++ K C+ L L G I G + K+ + N I ++ CG +E AR++FD+
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 181 GIRDSVSYNSMIDGYVKSGNIESA---RELFDSMPIR--ERNLISWNSVLNGYAQLKSGL 235
+RD VS+N +I+GY K G E A +L +S ++ + +I S + L G
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 236 QFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLG 295
+F + E + N+++ KCG + +A+ +FD + KR +VSW MI GYA+ G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 296 RVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
+D++R+LFD+M ++DVV NAM+GG V+ AL +F MQ PD+ +++ L
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS-NTKPDEITMIHCL 396
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVD 415
SA +QLG +D G+ IHRY+EK SLN G +L+DMY+KCG+I A+ VF I+ +
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 416 HWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELM 475
+ A+I GLA+HG A EM I PD+ITF GLL+AC H G+++ G F M
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 476 RRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNV 535
+ L P+L+HY MVD+LGRAG +E A L+E MPME + +W LL CR + N+ +
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVEL 576
Query: 536 GEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEG 595
GE AK L+ +D S+S YVLL M+ MW DA+R R MM ER ++K+PGCS IE+ G
Sbjct: 577 GEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNG 636
Query: 596 VVHEFFVRDKSRLQVRDIY 614
+V EF VRDKSR + IY
Sbjct: 637 IVCEFIVRDKSRPESEKIY 655
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 359/619 (57%), Gaps = 15/619 (2%)
Query: 5 ANYNQPCNSTQST--LLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCT 62
+N NQP + + + + L+ +C +L + Q H MI TG + + +KL A + S
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 63 PLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLML-DNGVSVDKFS 121
L E+AR +F + K + F WN +I+ Y+ G DP ++ F M+ ++ +K++
Sbjct: 79 SL-EYARKVFDEI----PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 133
Query: 122 ASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMG 181
++KA + + + G +HG+ K A GSD+F+ N LI Y CG L+ A ++F +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 182 IRDSVSYNSMIDGYVKSGNIESARELFDSMPIRE--RNLISWNSVLNGYAQLKSGLQFAW 239
+D VS+NSMI+G+V+ G+ + A ELF M + + ++ VL+ A++++ L+F
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN-LEFGR 252
Query: 240 QIFEKMPER----DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLG 295
Q+ + E +L N+ML KCG ++DA+ LFD M ++D V+W M+DGYA
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 296 RVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
+ AR + + MP++D+VA NA++ Y +NG +AL +F +Q + + + +LV L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVD 415
SA AQ+G ++ G IH Y++K +N ALI MYSKCG +E + +VF +E V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 416 HWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELM 475
W+AMI GLA+HG G A D+ +M+ +++P+ +TFT + AC+H GLV E F M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 476 RRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNV 535
+ + PE +HY C+VD+LGR+G++E A IE MP+ P+ +W LL AC+ + NLN+
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 536 GEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEG 595
E L+ ++ N ++VLLSN++A LG W + +R M+ LKK PGCS IE++G
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 596 VVHEFFVRDKSRLQVRDIY 614
++HEF D + +Y
Sbjct: 613 MIHEFLSGDNAHPMSEKVY 631
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/608 (35%), Positives = 338/608 (55%), Gaps = 48/608 (7%)
Query: 21 LRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFRE 80
L KC LN V Q+HA++I ++ H+ KL+++ S R F +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALS---------LCRQTNLAVRVFNQ 76
Query: 81 KKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEG 138
++P L N++I+ ++ P +A +F M G+ D F+ +LKACS +
Sbjct: 77 VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 139 LQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKS 198
+H + K+ SD+++ N LI Y RCG L G+RD
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL----------GVRD-------------- 172
Query: 199 GNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG-LQFAWQIFEKMPERDLISWNSML 257
A +LF+ M ER+ +SWNS+L G +K+G L+ A ++F++MP+RDLISWN+ML
Sbjct: 173 -----AMKLFEKM--SERDTVSWNSMLGGL--VKAGELRDARRLFDEMPQRDLISWNTML 223
Query: 258 HGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMP--KRDVVAC 315
G +C +M A LF+KMP+R+ VSW+ M+ GY+K G +++AR +FD+MP ++VV
Sbjct: 224 DGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 316 NAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLE 375
++ GY G +A + D M L D A+++ +L+A + G + G+ IH L+
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVAS-GLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 376 KDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFD 435
+ N AL+DMY+KCG+++ A VF I + WN M++GL +HG G+ A +
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 436 LLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDIL 495
L M R I PD +TF +L +C HAGL+ EG+ F M +++ L P+++HYGC+VD+L
Sbjct: 403 LFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLL 462
Query: 496 GRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYV 555
GR G ++ A +++ MPMEPN VIW LL ACR + +++ + V +L+ +D + +Y
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 556 LLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYY 615
LLSN++A W +RS MK ++K G S +ELE +HEF V DKS + IY
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQ 582
Query: 616 MLDNMWTP 623
ML ++ P
Sbjct: 583 MLGSLIEP 590
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/620 (35%), Positives = 339/620 (54%), Gaps = 22/620 (3%)
Query: 20 LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFR 79
+L CKT + Q+H++ IT G N KL + S ++ + Y F
Sbjct: 40 ILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCS-------RLGGHVSYAYKLFV 92
Query: 80 EKKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSR-LGLIE 136
+ +P +WN +IK +S E + ++ ML GV+ D + +L R G +
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 137 EGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV 196
G ++H + K GS+L++QN L+ +Y CG ++ AR +FD+ D S+N MI GY
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 197 KSGNIESARELFDSMPIRERNLISWNSV-----LNGYAQLKSG---LQFAWQIFEKMPER 248
+ E + EL M ERNL+S SV L+ +++K + + E E
Sbjct: 213 RMKEYEESIELLVEM---ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 249 DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMP 308
L N++++ CG+MD A +F M RDV+SW +++ GY + G + +AR FD+MP
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
RD ++ M+ GY+R G ++LEIF MQ + PD+ ++V VL+A A LG ++ G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGE 388
Query: 369 AIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHG 428
I Y++K++ + G ALIDMY KCG E A KVF ++ W AM+ GLA +G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 429 LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHY 488
G+ A + +M+ +SI+PDDIT+ G+L+AC H+G+V + F MR H++EP L HY
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 489 GCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDS 548
GCMVD+LGRAG ++ A ++ MPM PN ++W LL A R + + + E AK ++ ++
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEP 568
Query: 549 SNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRL 608
N + Y LL N++AG W D R VR + + +KK PG S IE+ G HEF DKS L
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628
Query: 609 QVRDIYYMLDNMWTPDSVAT 628
Q +IY L+ + + A
Sbjct: 629 QSEEIYMKLEELAQESTFAA 648
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/628 (35%), Positives = 351/628 (55%), Gaps = 43/628 (6%)
Query: 30 VNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHA------------ 77
V +HA +I +GF + +L+ ++S C L E R +F K
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSK--CGSL-EDGRQVFDKMPQRNIYTWNSVVTG 95
Query: 78 -------------FRE--KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSA 122
FR ++D WN+++ ++ +EAL F +M G ++++S
Sbjct: 96 LTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 123 SLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGI 182
+ VL ACS L + +G+Q+H L+ K F SD+++ + L+ +Y +CG + A+++FD+MG
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 183 RDSVSYNSMIDGYVKSGNIESARELFDSM--PIRERNLISWNSVLNGYAQL---KSGLQF 237
R+ VS+NS+I + ++G A ++F M E + ++ SV++ A L K G +
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 238 AWQIFEKMPER-DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGR 296
++ + R D+I N+ + KC ++ +A+ +FD MP R+V++ +MI GYA
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 297 VDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLS 356
AR +F +M +R+VV+ NA++ GY +NG + +AL +F ++ E + P S +L
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE-SVCPTHYSFANILK 394
Query: 357 AIAQLGHIDKGVAIHRYLEKDQFSLNGKH------GVALIDMYSKCGSIENAIKVFEQIE 410
A A L + G+ H ++ K F G +LIDMY KCG +E VF ++
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 411 DGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLL 470
+ WNAMI G A +G G A +L EM +PD IT G+L+AC HAG V+EG
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 471 CFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNY 530
F M R + P HY CMVD+LGRAG +E A+++IE+MPM+P+ VIW +LL+AC+ +
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 531 ENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSW 590
N+ +G+ VA+ L+ ++ SNS YVLLSNM+A LG W D VR M++ + K PGCSW
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 591 IELEGVVHEFFVRDKSRLQVRDIYYMLD 618
I+++G H F V+DKS + + I+ +LD
Sbjct: 635 IKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 318/540 (58%), Gaps = 12/540 (2%)
Query: 81 KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQ 140
++D WN ++ Y+ +A +F M + + S + +L A + +EE
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC- 208
Query: 141 IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN 200
+L K L NCL+ +V+ + ARQ FD M +RD VS+N++I GY +SG
Sbjct: 209 ---MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 201 IESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGC 260
I+ AR+LFD P+++ + +W ++++GY Q + ++ A ++F+KMPER+ +SWN+ML G
Sbjct: 266 IDEARQLFDESPVQD--VFTWTAMVSGYIQNRM-VEEARELFDKMPERNEVSWNAMLAGY 322
Query: 261 VKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMG 320
V+ +M+ A+ LFD MP R+V +W MI GYA+ G++ A+ LFD+MPKRD V+ AM+
Sbjct: 323 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 321 GYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFS 380
GY ++G+S +AL +F M+ E + +S LS A + ++ G +H L K +
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 381 LNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEM 440
G AL+ MY KCGSIE A +F+++ + WN MI G + HG GE+A M
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Query: 441 ERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGH 500
+R ++PDD T +L+AC+H GLV +G F M + + + P QHY CMVD+LGRAG
Sbjct: 502 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 501 IEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNM 560
+E A NL+++MP EP+ IW TLL A R + N + E A + M+ NS YVLLSN+
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 621
Query: 561 FAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNM 620
+A G W D ++R M+++ +KK+PG SWIE++ H F V D+ + +I+ L+ +
Sbjct: 622 YASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 207/397 (52%), Gaps = 26/397 (6%)
Query: 152 SDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSM 211
SD+ N IS Y+R G A ++F +M SVSYN MI GY+++G E AR+LFD M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 212 PIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQA 271
P ER+L+SWN ++ GY + ++ L A ++FE MPERD+ SWN+ML G + G +DDA++
Sbjct: 122 P--ERDLVSWNVMIKGYVRNRN-LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 272 LFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKA 331
+FD+MP+++ VSW ++ Y + +++ A LF +V+ N ++GG+V+ ++A
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 332 LEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAI-HRYLEKDQFSLNGKHGVALI 390
+ FD+M D S +++ AQ G ID+ + +D F+ A++
Sbjct: 239 RQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW-----TAMV 288
Query: 391 DMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDI 450
Y + +E A ++F+++ + + WNAM+ G E+A +L M ++
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS---- 344
Query: 451 TFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIED 510
T+ ++ A G + E F+ ++ K +P + M+ ++GH A L
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFD---KMPKRDP--VSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 511 MPMEP---NDVIWRTLLSACRNYENLNVGEPVAKHLI 544
M E N + + LS C + L +G+ + L+
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 189/356 (53%), Gaps = 38/356 (10%)
Query: 179 KMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG-LQF 237
K G D +N I Y+++G A +F MP + +S+N +++GY L++G +
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP--RWSSVSYNGMISGY--LRNGEFEL 113
Query: 238 AWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRV 297
A ++F++MPERDL+SWN M+ G V+ + A+ LF+ MP+RDV SW M+ GYA+ G V
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 298 DIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSA 357
D AR +FD MP+++ V+ NA++ YV+N +A C L+ ++ +LV S
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA--------CMLFKSRENWALV---SW 222
Query: 358 IAQLGHIDKGVAIHRYLEKDQF--SLNGKHGVA---LIDMYSKCGSIENAIKVFEQIEDG 412
LG K I +E QF S+N + V+ +I Y++ G I+ A ++F++
Sbjct: 223 NCLLGGFVKKKKI---VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 413 SVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCF 472
V W AM++G + + E A +L +M E +++++ +L AG V+ +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAML-----AGYVQGERM-- 328
Query: 473 ELMRRIHKLEP--ELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSA 526
E+ + + + P + + M+ + G I A+NL + MP + + V W +++
Sbjct: 329 EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/662 (33%), Positives = 361/662 (54%), Gaps = 82/662 (12%)
Query: 2 FVSANYNQPCNSTQS--TLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSS 59
F+ ++ + P +S ++ +L LL CKTL + IHA+MI G + +KL+ S
Sbjct: 19 FLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS 78
Query: 60 PCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDK 119
P +A +F ++ + +WN + + ++ DP AL ++ M+ G+ +
Sbjct: 79 PHFEGLPYAISVFKTI----QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNS 134
Query: 120 FSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDK 179
++ VLK+C++ +EG QIHG + K+ DL++ LIS+YV
Sbjct: 135 YTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV-------------- 180
Query: 180 MGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAW 239
++G +E A ++FD P R+++S+ +++ GYA + ++ A
Sbjct: 181 -----------------QNGRLEDAHKVFDKSP--HRDVVSYTALIKGYAS-RGYIENAQ 220
Query: 240 QIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPK--------------------- 278
++F+++P +D++SWN+M+ G + G +A LF M K
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 279 -----RDVVSWAN-------------MIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMG 320
R V W + +ID Y+K G ++ A LF+ +P +DV++ N ++G
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 340
Query: 321 GYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFS 380
GY +AL +F M P+D +++ +L A A LG ID G IH Y++K
Sbjct: 341 GYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 381 LNGKHGV--ALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLM 438
+ + +LIDMY+KCG IE A +VF I S+ WNAMI G A+HG + +FDL
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 439 EMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRA 498
M ++ I+PDDITF GLL+AC+H+G++ G F M + +K+ P+L+HYGCM+D+LG +
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
Query: 499 GHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLS 558
G + A +I M MEP+ VIW +LL AC+ + N+ +GE A++LI ++ N SYVLLS
Sbjct: 520 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 579
Query: 559 NMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLD 618
N++A G WN+ + R+++ ++ +KK+PGCS IE++ VVHEF + DK + R+IY ML+
Sbjct: 580 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 639
Query: 619 NM 620
M
Sbjct: 640 EM 641
>sp|P0C8Q5|PP336_ARATH Pentatricopeptide repeat-containing protein At4g22760
OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1
Length = 578
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/578 (34%), Positives = 319/578 (55%), Gaps = 15/578 (2%)
Query: 19 LLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVAS---FSSSPCTPLTEFARYIFFKY 75
L++C L Q+HA+++ + HL LV F+ + + + I +
Sbjct: 8 FFLQRCVVLEQAKQVHAQLVVNRY---NHLEPILVHQTLHFTKEFSRNIVTYVKRILKGF 64
Query: 76 HAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLI 135
+ D F W +++ S KE + ++ M ++G+ + + VL+AC ++ +
Sbjct: 65 NG----HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 136 EEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGY 195
+G IH K +++Q L+ LY R GY+E A++ FD + +++VS+NS++ GY
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 196 VKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNS 255
++SG ++ AR +FD +P E++ +SWN +++ YA+ K + A +F MP + SWN
Sbjct: 181 LESGELDEARRVFDKIP--EKDAVSWNLIISSYAK-KGDMGNACSLFSAMPLKSPASWNI 237
Query: 256 MLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVAC 315
++ G V C +M A+ FD MP+++ VSW MI GY KLG V A LF M K+D +
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 316 NAMMGGYVRNGYSMKALEIFDNM-QCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYL 374
+AM+ Y +NG AL++F M + Y+ PD+ +L V+SA +QLG+ G + Y+
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 375 EKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAF 434
+ ++ +LID+Y K G A K+F + ++AMI G I+G+ A
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEAN 417
Query: 435 DLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDI 494
L M I P+ +TFTGLL+A +H+GLV+EG CF M+ H LEP HYG MVD+
Sbjct: 418 SLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDM 476
Query: 495 LGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSY 554
LGRAG +E A LI+ MPM+PN +W LL A + N+ GE H + +++ +
Sbjct: 477 LGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYL 536
Query: 555 VLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIE 592
L+ +++ +G W+DAR VR +KE+ L K GCSW+E
Sbjct: 537 SHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/627 (33%), Positives = 335/627 (53%), Gaps = 32/627 (5%)
Query: 19 LLLRKCKTLNDV---NQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKY 75
+ + C ++ V HA + TGFI N + LVA +S C L++ AR +F +
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR--CRSLSD-ARKVFDEM 188
Query: 76 HAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDN-GVSVDKFSASLVLKACSRLGL 134
+ D WN+II++Y+ PK AL MF M + G D + VL C+ LG
Sbjct: 189 SVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 135 IEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDG 194
G Q+H ++F+ NCL+ +Y +CG ++ A +F M ++D VS+N+M+ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 195 YVKSGNIESARELFDSMPIRE--RNLISWNSVLNGYAQLKSG---LQFAWQIFEKMPERD 249
Y + G E A LF+ M + ++++W++ ++GYAQ G L Q+ + +
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 250 LISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWAN-----------MIDGYAKLGRVD 298
++ S+L GC G + + + K + N +ID YAK +VD
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 299 IARRLFDEM-PK-RDVVACNAMMGGYVRNGYSMKALEIFDNM-QCELYLHPDDASLVIVL 355
AR +FD + PK RDVV M+GGY ++G + KALE+ M + + P+ ++ L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 356 SAIAQLGHIDKGVAIHRY-LEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSV 414
A A L + G IH Y L Q ++ LIDMY+KCGSI +A VF+ + +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 415 DHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFEL 474
W +++ G +HG GE A + EM R+ + D +T +L AC+H+G++ +G+ F
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 475 MRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLN 534
M+ + + P +HY C+VD+LGRAG + AA LIE+MPMEP V+W LS CR + +
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 535 VGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELE 594
+GE A+ + + S++ SY LLSN++A G W D R+RS+M+ + +KK PGCSW+E
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
Query: 595 GVVHEFFVRDKSRLQVRDIY-YMLDNM 620
FFV DK+ ++IY +LD+M
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 266/543 (48%), Gaps = 43/543 (7%)
Query: 12 NSTQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPC-----TPLTE 66
++ + T + KCKT++ V IH ++++ G I +LT+ L++++ S C + L
Sbjct: 26 SAPEITPPFIHKCKTISQVKLIHQKLLSFG-ILTLNLTSHLISTYISVGCLSHAVSLLRR 84
Query: 67 FARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVL 126
F YH WN++I++Y + L +F LM + D ++ V
Sbjct: 85 FPPSDAGVYH----------WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVF 134
Query: 127 KACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSV 186
KAC + + G H L F S++F+ N L+++Y RC L AR++FD+M + D V
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194
Query: 187 SYNSMIDGYVKSGNIESARELFDSMP----IRERNLISWNSVLNGYAQLKS-GLQFAWQI 241
S+NS+I+ Y K G + A E+F M R N I+ +VL A L + L
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDN-ITLVNVLPPCASLGTHSLGKQLHC 253
Query: 242 FEKMPE--RDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDI 299
F E +++ N ++ KCG MD+A +F M +DVVSW M+ GY+++GR +
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 300 ARRLFDEMP----KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
A RLF++M K DVV +A + GY + G +AL + M + P++ +L+ VL
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVL 372
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSL--NGKHG------VALIDMYSKCGSIENAIKVFE 407
S A +G + G IH Y K L NG HG LIDMY+KC ++ A +F+
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNG-HGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 408 QI--EDGSVDHWNAMINGLAIHGLGELAFDLLMEM--ERLSIEPDDITFTGLLNACAHAG 463
+ ++ V W MI G + HG A +LL EM E P+ T + L ACA
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 464 LVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTL 523
++ G R + L C++D+ + G I AR + ++M M N+V W +L
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSL 550
Query: 524 LSA 526
++
Sbjct: 551 MTG 553
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 348/624 (55%), Gaps = 26/624 (4%)
Query: 10 PCNSTQSTLLL--LRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEF 67
P ST + +L L CK+LN + Q+HA ++ T + N L + L SS +
Sbjct: 6 PIASTAANTILEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSS----SSIN 59
Query: 68 ARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLK 127
Y + + + ++N ++ S +P+ ++ + + G +D+FS +LK
Sbjct: 60 LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILK 119
Query: 128 ACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVS 187
A S++ + EG+++HG+ K+A D F++ + +Y CG + +AR +FD+M RD V+
Sbjct: 120 AVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVT 179
Query: 188 YNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQL--KSG-LQFAWQIFEK 244
+N+MI+ Y + G ++ A +LF+ M ++ N++ +L ++G +++ I+E
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEM--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237
Query: 245 MPERDLISWNSMLHGCVK----CGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIA 300
+ E D+ +L V G MD A+ F KM R++ M+ GY+K GR+D A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Query: 301 RRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQ 360
+ +FD+ K+D+V M+ YV + Y +AL +F+ M C + PD S+ V+SA A
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACAN 356
Query: 361 LGHIDKGVAIHRYLE----KDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDH 416
LG +DK +H + + + S+N ALI+MY+KCG ++ VFE++ +V
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINN----ALINMYAKCGGLDATRDVFEKMPRRNVVS 412
Query: 417 WNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMR 476
W++MIN L++HG A L M++ ++EP+++TF G+L C+H+GLV+EG F M
Sbjct: 413 WSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 472
Query: 477 RIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVG 536
+ + P+L+HYGCMVD+ GRA + A +IE MP+ N VIW +L+SACR + L +G
Sbjct: 473 DEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELG 532
Query: 537 EPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGV 596
+ AK ++ ++ + + VL+SN++A W D R +R +M+E+N+ K G S I+ G
Sbjct: 533 KFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGK 592
Query: 597 VHEFFVRDKSRLQVRDIYYMLDNM 620
HEF + DK Q +IY LD +
Sbjct: 593 SHEFLIGDKRHKQSNEIYAKLDEV 616
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 348 bits (893), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 306/574 (53%), Gaps = 75/574 (13%)
Query: 11 CNSTQSTLL-LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFAR 69
C+ST +L + K+L ++ Q HA M+ TG +T +KLVA +++P +A
Sbjct: 35 CSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAH 94
Query: 70 YIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKAC 129
I + + + F N++I+ Y++ P+ AL +F ML V DK+S + VLKAC
Sbjct: 95 SILNRIGS----PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKAC 150
Query: 130 SRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYN 189
+ EEG QIHGL K +D+F++ N
Sbjct: 151 AAFCGFEEGRQIHGLFIKSGLVTDVFVE-------------------------------N 179
Query: 190 SMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERD 249
++++ Y +SG E AR++ D +MP RD
Sbjct: 180 TLVNVYGRSGYFEIARKVLD----------------------------------RMPVRD 205
Query: 250 LISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPK 309
+SWNS+L ++ G +D+A+ALFD+M +R+V SW MI GYA G V A+ +FD MP
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPV 265
Query: 310 RDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVA 369
RDVV+ NAM+ Y G + LE+F+ M + PD +LV VLSA A LG + +G
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW 325
Query: 370 IHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGL 429
+H Y++K + G AL+DMYSKCG I+ A++VF V WN++I+ L++HGL
Sbjct: 326 VHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGL 385
Query: 430 GELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYG 489
G+ A ++ EM +P+ ITF G+L+AC H G++ + FE+M ++++EP ++HYG
Sbjct: 386 GKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYG 445
Query: 490 CMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSS 549
CMVD+LGR G IE A L+ ++P + ++ +LL AC+ + L E +A L+ ++
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Query: 550 NSSSYVLLSNMFAGLGMWN---DARRVRSMMKER 580
+SS Y +SN++A G W D R R+M ER
Sbjct: 506 DSSGYAQMSNLYASDGRWEKVIDGR--RNMRAER 537
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 308/543 (56%), Gaps = 38/543 (6%)
Query: 80 EKKDPFLWNAIIKTYSHGLDPKEALVMFC-LMLDNGVSVDKFSASLVLKACSRLGLIEEG 138
++ D FL N++IK Y ++ ++ L + + D F+ + + K+CS + +G
Sbjct: 38 QRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQG 97
Query: 139 LQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKS 198
LQ+H + + F +D+++ ++ +Y + F KMG
Sbjct: 98 LQLHSQIWRFGFCADMYVSTGVVDMYAK----------FGKMG----------------- 130
Query: 199 GNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPE-RDLISWNSML 257
AR FD MP R+ +SW ++++GY + L A ++F++MP +D++ +N+M+
Sbjct: 131 ----CARNAFDEMP--HRSEVSWTALISGYIRCGE-LDLASKLFDQMPHVKDVVIYNAMM 183
Query: 258 HGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNA 317
G VK G M A+ LFD+M + V++W MI GY + +D AR+LFD MP+R++V+ N
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNT 243
Query: 318 MMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKD 377
M+GGY +N + + +F MQ L PDD +++ VL AI+ G + G H ++++
Sbjct: 244 MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 378 QFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLL 437
+ K A++DMYSKCG IE A ++F+++ + V WNAMI+G A++G A DL
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 438 MEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGR 497
+ M + +PD+IT ++ AC H GLV+EG F +MR + L +++HYGCMVD+LGR
Sbjct: 364 VTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGR 421
Query: 498 AGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLL 557
AG ++ A +LI +MP EPN +I + LSAC Y+++ E + K + ++ N +YVLL
Sbjct: 422 AGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLL 481
Query: 558 SNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYML 617
N++A W+D V+++M++ KK GCS IE+ +V EF D + R I+ +L
Sbjct: 482 RNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Query: 618 DNM 620
++
Sbjct: 542 GDL 544
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 21/242 (8%)
Query: 297 VDIARRLFDEMPKR-DVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
+ AR+LFD+ P+R D N+M+ Y+ + ++ +++ E PD+ + +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVD 415
+ + + +G+ +H + + F + ++DMY+K G + A F+++ S
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 416 HWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELM 475
W A+I+G G +LA L +M + D + + +++ G VK G M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMD-----GFVKSG-----DM 192
Query: 476 RRIHKLEPELQH-----YGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSA-CRN 529
+L E+ H + M+ I+AAR L + MP E N V W T++ C+N
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIGGYCQN 251
Query: 530 YE 531
+
Sbjct: 252 KQ 253
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 329/592 (55%), Gaps = 49/592 (8%)
Query: 30 VNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNA 89
+ QIHAR++ G + L TKL+ +SS +T FAR +F + F WNA
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLI--HASSSFGDIT-FARQVFDDL----PRPQIFPWNA 89
Query: 90 IIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVA 149
II+ YS ++AL+M+ M VS D F+ +LKACS L ++ G +H + ++
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 150 FGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFD 209
F +D+F+QN LI+LY +C L SAR +F+
Sbjct: 150 FDADVFVQNGLIALYAKCRRLG-------------------------------SARTVFE 178
Query: 210 SMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDL----ISWNSMLHGCVKCGK 265
+P+ ER ++SW ++++ YAQ ++ A +IF +M + D+ ++ S+L+
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPME-ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 266 MDDAQALFDKMPKRDVVSWANMIDG----YAKLGRVDIARRLFDEMPKRDVVACNAMMGG 321
+ +++ + K + +++ YAK G+V A+ LFD+M +++ NAM+ G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 322 YVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSL 381
Y +NGY+ +A+++F M + PD S+ +SA AQ+G +++ +++ Y+ + +
Sbjct: 298 YAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 382 NGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEME 441
+ ALIDM++KCGS+E A VF++ D V W+AMI G +HG A L ME
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 442 RLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHI 501
R + P+D+TF GLL AC H+G+V+EG F M HK+ P+ QHY C++D+LGRAGH+
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHL 475
Query: 502 EAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMF 561
+ A +I+ MP++P +W LLSAC+ + ++ +GE A+ L +D SN+ YV LSN++
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535
Query: 562 AGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDI 613
A +W+ VR MKE+ L K GCSW+E+ G + F V DKS + +I
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/530 (36%), Positives = 308/530 (58%), Gaps = 13/530 (2%)
Query: 85 FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGL 144
++N ++K+ + G + L +F + G+ D F+ +VLK+ RL + EG ++HG
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 145 LRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESA 204
K D ++ N L+ +Y G +E ++FD+M RD VS+N +I YV +G E A
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 205 RELFDSMPIRERNLI----SWNSVLNGYAQLKSGLQFAWQIFEKMP---ERDLISWNSML 257
+F M +E NL + S L+ + LK+ L+ +I+ + E + N+++
Sbjct: 132 IGVFKRMS-QESNLKFDEGTIVSTLSACSALKN-LEIGERIYRFVVTEFEMSVRIGNALV 189
Query: 258 HGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNA 317
KCG +D A+A+FD M ++V W +M+ GY GR+D AR LF+ P +DVV A
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 318 MMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKD 377
MM GYV+ +ALE+F MQ + PD+ LV +L+ AQ G +++G IH Y+ ++
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTA-GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 378 QFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLL 437
+ +++ G AL+DMY+KCG IE A++VF +I++ W ++I GLA++G+ A DL
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 438 MEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGR 497
EME + + D ITF +L AC H G V EG F M H ++P+ +H C++D+L R
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Query: 498 AGHIEAARNLIEDMPMEPNDV---IWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSY 554
AG ++ A LI+ M E ++ ++ +LLSA RNY N+ + E VA+ L ++ S+SS++
Sbjct: 429 AGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH 488
Query: 555 VLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRD 604
LL++++A W D VR MK+ ++K PGCS IE++GV HEF V D
Sbjct: 489 TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGD 538
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 288/498 (57%), Gaps = 16/498 (3%)
Query: 126 LKACSRLGLIEEGLQIHGLLRKVAFGSD-----LFLQNCLISLYVRCGYLEFARQLFDKM 180
L+ CS+ EE QIH + K D FL C+ S +L +A+ +FD
Sbjct: 21 LQRCSKQ---EELKQIHARMLKTGLMQDSYAITKFLSFCISS--TSSDFLPYAQIVFDGF 75
Query: 181 GIRDSVSYNSMIDGYVKSGNIESARELFDSM--PIRERNLISWNSVLNGYAQLKS---GL 235
D+ +N MI G+ S E + L+ M N ++ S+L + L +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 236 QFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLG 295
Q QI + E D+ + NS+++ G A LFD++P+ D VSW ++I GY K G
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 296 RVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
++DIA LF +M +++ ++ M+ GYV+ + +AL++F MQ + PD+ SL L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ-NSDVEPDNVSLANAL 254
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVD 415
SA AQLG +++G IH YL K + ++ G LIDMY+KCG +E A++VF+ I+ SV
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 416 HWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELM 475
W A+I+G A HG G A MEM+++ I+P+ ITFT +L AC++ GLV+EG L F M
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 476 RRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNV 535
R + L+P ++HYGC+VD+LGRAG ++ A+ I++MP++PN VIW LL ACR ++N+ +
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 536 GEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEG 595
GE + + LI +D + YV +N+ A W+ A R +MKE+ + K+PGCS I LEG
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEG 494
Query: 596 VVHEFFVRDKSRLQVRDI 613
HEF D+S ++ I
Sbjct: 495 TTHEFLAGDRSHPEIEKI 512
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 234/438 (53%), Gaps = 21/438 (4%)
Query: 17 TLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYH 76
T+ L++C ++ QIHARM+ TG +++++ TK ++ SS + +A+ +F +
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF- 75
Query: 77 AFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIE 136
++ D FLWN +I+ +S +P+ +L+++ ML + + ++ +LKACS L E
Sbjct: 76 ---DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 137 EGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV 196
E QIH + K+ + +D++ N LI+ Y G + A LFD++ D VS+NS+I GYV
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 197 KSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMP----ERDLIS 252
K+G ++ A LF M E+N ISW ++++GY Q + A Q+F +M E D +S
Sbjct: 193 KAGKMDIALTLFRKMA--EKNAISWTTMISGYVQADMNKE-ALQLFHEMQNSDVEPDNVS 249
Query: 253 WNSMLHGCVKCGKMDDAQALFDKMPKR----DVVSWANMIDGYAKLGRVDIARRLFDEMP 308
+ L C + G ++ + + + K D V +ID YAK G ++ A +F +
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
K+ V A A++ GY +G+ +A+ F MQ ++ + P+ + VL+A + G +++G
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 369 AIHRYLEKD-QFSLNGKHGVALIDMYSKCGSIENAIKVFEQIE-DGSVDHWNAMINGLAI 426
I +E+D +H ++D+ + G ++ A + +++ + W A++ I
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428
Query: 427 HG---LGELAFDLLMEME 441
H LGE ++L+ ++
Sbjct: 429 HKNIELGEEIGEILIAID 446
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 336/600 (56%), Gaps = 23/600 (3%)
Query: 32 QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAII 91
QIH ++ G+ K+ + LV ++ C L + AR +F + +++ W ++I
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAE--CGEL-DSARKVFDEM----SERNVVSWTSMI 207
Query: 92 KTYSHGLDPKEALVMFCLML-DNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAF 150
Y+ K+A+ +F M+ D V+ + + V+ AC++L +E G +++ +R
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 151 GSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDS 210
+ + + L+ +Y++C ++ A++LFD+ G + N+M YV+ G A +F+
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 211 M------PIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISW----NSMLHGC 260
M P R IS S ++ +QL++ L + + SW N+++
Sbjct: 328 MMDSGVRPDR----ISMLSAISSCSQLRNIL-WGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 261 VKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMG 320
+KC + D A +FD+M + VV+W +++ GY + G VD A F+ MP++++V+ N ++
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 321 GYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFS 380
G V+ +A+E+F +MQ + ++ D +++ + SA LG +D I+ Y+EK+
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 381 LNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEM 440
L+ + G L+DM+S+CG E+A+ +F + + V W A I +A+ G E A +L +M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 441 ERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGH 500
++PD + F G L AC+H GLV++G F M ++H + PE HYGCMVD+LGRAG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 501 IEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNM 560
+E A LIEDMPMEPNDVIW +LL+ACR N+ + A+ + + + SYVLLSN+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 561 FAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNM 620
+A G WND +VR MKE+ L+K PG S I++ G HEF D+S ++ +I MLD +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 256/534 (47%), Gaps = 70/534 (13%)
Query: 14 TQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFF 73
T++T L+ CKT++++ H + G + TKLVA FA+ +F
Sbjct: 32 TKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFE 91
Query: 74 KYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLG 133
++ F++N++I+ Y+ EA+++F M+++G+S DK++ L AC++
Sbjct: 92 NSESY---GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 134 LIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMID 193
G+QIHGL+ K+ + DLF+QN L+ Y CG L+ AR++FD+M R+ VS+ SMI
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 194 GYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISW 253
GY + + A +LF M +R+ ++ NSV +
Sbjct: 209 GYARRDFAKDAVDLFFRM-VRDEE-VTPNSV---------------------------TM 239
Query: 254 NSMLHGCVKCGKMDDAQALFDKMPKRDV----VSWANMIDGYAKLGRVDIARRLFDEMPK 309
++ C K ++ + ++ + + + + ++D Y K +D+A+RLFDE
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 310 RDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVA 369
++ CNAM YVR G + +AL +F N+ + + PD S++ +S+ +QL +I G +
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 370 IHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQ----------------IEDGS 413
H Y+ ++ F ALIDMY KC + A ++F++ +E+G
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 414 VD---------------HWNAMINGLAIHGLGELAFDLLMEME-RLSIEPDDITFTGLLN 457
VD WN +I+GL L E A ++ M+ + + D +T + +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 458 ACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDM 511
AC H G + + + + + ++ +++ +VD+ R G E+A ++ +
Sbjct: 479 ACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 296/538 (55%), Gaps = 45/538 (8%)
Query: 125 VLKACSRLGLIEEGLQIHGLLRKVAFG-SDLFLQNCLISLYVRCGYLEFARQLFDKMGIR 183
+L+ C +++G IH L+ F + L N LI +Y++CG A ++FD+M +R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 184 DSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQ---LKSGLQFAWQ 240
+ S+N+M+ GYVKSG + AR +FDSMP ER+++SWN+++ GYAQ L L F +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMP--ERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 241 IFEKMPERDLISWNSMLHGCVK-----------------------------------CGK 265
+ + S+ +L CVK CG+
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 266 MDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRN 325
M+ A+ FD+M +D+ W +I GYAKLG ++ A +LF EMP+++ V+ A++ GYVR
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 326 GYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKH 385
G +AL++F M L + P+ + L A A + + G IH Y+ + N
Sbjct: 290 GSGNRALDLFRKM-IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 386 GVALIDMYSKCGSIENAIKVFEQIEDG-SVDHWNAMINGLAIHGLGELAFDLLMEMERLS 444
+LIDMYSK GS+E + +VF +D WN MI+ LA HGLG A +L +M +
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 445 IEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAA 504
++P+ T +LNAC+H+GLV+EGL FE M H + P+ +HY C++D+LGRAG +
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 505 RNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGL 564
IE+MP EP+ IW +L CR + N +G+ A LI +D +S+ Y+LLS+++A
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADH 528
Query: 565 GMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVR--DIYYMLDNM 620
G W ++R +MK+R + K SWIE+E V F V D S R +IY++L N+
Sbjct: 529 GKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 204/392 (52%), Gaps = 40/392 (10%)
Query: 81 KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQ 140
++D WN ++ Y+ + EAL + +G+ ++FS + +L AC + ++ Q
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 141 IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN 200
HG + F S++ L +I Y +CG +E A++ FD+M ++D + ++I GY K G+
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 201 IESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKM------PERDLISWN 254
+E+A +LF MP E+N +SW +++ GY + SG + A +F KM PE+ +++
Sbjct: 261 MEAAEKLFCEMP--EKNPVSWTALIAGYVRQGSGNR-ALDLFRKMIALGVKPEQ--FTFS 315
Query: 255 SMLHGCVKCGKMDDAQALFDKMPKRDV----VSWANMIDGYAKLGRVDIARRLF---DEM 307
S L + + + M + +V + +++ID Y+K G ++ + R+F D+
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD- 374
Query: 308 PKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKG 367
K D V N M+ ++G KAL + D+M + + P+ +LV++L+A + G +++G
Sbjct: 375 -KHDCVFWNTMISALAQHGLGHKALRMLDDM-IKFRVQPNRTTLVVILNACSHSGLVEEG 432
Query: 368 VAIHRYLEKDQFSLNGKHGVA--------LIDMYSKCGSIENAIKVFEQIEDGSVDH-WN 418
+ R+ E S+ +HG+ LID+ + G + ++ E++ H WN
Sbjct: 433 L---RWFE----SMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWN 485
Query: 419 AMINGLAIHG---LGELAFDLLMEMERLSIEP 447
A++ IHG LG+ A D L++++ S P
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAP 517
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 173/429 (40%), Gaps = 81/429 (18%)
Query: 23 KCKTLNDVNQIHARMITTGFIKNTHLTTKLVASF-------SSSPC-------------T 62
K + L Q H +++ GF+ N L+ ++ ++ S+ C T
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 63 PLTEFARY----IFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVD 118
++ +A+ K +K+P W A+I Y AL +F M+ GV +
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 119 KFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLF- 177
+F+ S L A + + + G +IHG + + + + + LI +Y + G LE + ++F
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 178 ---DKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG 234
DK D V +N+MI + G A + D M
Sbjct: 371 ICDDK---HDCVFWNTMISALAQHGLGHKALRMLDDM----------------------- 404
Query: 235 LQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKR-----DVVSWANMID 289
++F Q P R + +L+ C G +++ F+ M + D +A +ID
Sbjct: 405 IKFRVQ-----PNRTTLV--VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLID 457
Query: 290 GYAKLGRVDIARRLFDEMP-KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDD 348
+ G R +EMP + D NA++G +G + D + + L P+
Sbjct: 458 LLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL---IKLDPES 514
Query: 349 ASLVIVLSAI-AQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFE 407
++ I+LS+I A G + + ++K + +N + V+ I+ IE ++ F
Sbjct: 515 SAPYILLSSIYADHGKWELVEKLRGVMKKRR--VNKEKAVSWIE-------IEKKVEAF- 564
Query: 408 QIEDGSVDH 416
+ DGS H
Sbjct: 565 TVSDGSHAH 573
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 284/497 (57%), Gaps = 10/497 (2%)
Query: 120 FSASLVLKACSRLGLIEEGLQI-HGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFD 178
F + ++ C R G I+ L++ HG+ K + + + LI + + A QLFD
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 179 KMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFA 238
++ D+ SYN M+ YV++ N E A+ FD MP ++ SWN+++ GYA+ + ++ A
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD--AASWNTMITGYAR-RGEMEKA 174
Query: 239 WQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVD 298
++F M E++ +SWN+M+ G ++CG ++ A F P R VV+W MI GY K +V+
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 299 IARRLFDEMP-KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSA 357
+A +F +M +++V NAM+ GYV N L++F M E + P+ + L L
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSALLG 293
Query: 358 IAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHW 417
++L + G IH+ + K + +LI MY KCG + +A K+FE ++ V W
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 418 NAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRR 477
NAMI+G A HG + A L EM I PD ITF +L AC HAGLV G+ FE M R
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 478 IHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGE 537
+K+EP+ HY CMVD+LGRAG +E A LI MP P+ ++ TLL ACR ++N+ + E
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAE 473
Query: 538 PVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVV 597
A+ L+ ++S N++ YV L+N++A W D RVR MKE N+ K+PG SWIE+ V
Sbjct: 474 FAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533
Query: 598 HEFFVRDKSRLQVRDIY 614
H F D+ ++ I+
Sbjct: 534 HHFRSSDRIHPELDSIH 550
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 39/250 (15%)
Query: 82 KDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQI 141
K+ WNA+I Y P++ L +F ML+ G+ + S L CS L ++ G QI
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 142 HGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNI 201
H ++ K +D+ LIS+Y +CG L A +LF+ M +D V++N+MI GY + GN
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 202 ESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCV 261
+ A LF M + D I++ ++L C
Sbjct: 367 DKALCLFREM------------------------------IDNKIRPDWITFVAVLLACN 396
Query: 262 KCGKMDDAQALFDKM-------PKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVA 314
G ++ A F+ M P+ D + M+D + G+++ A +L MP R A
Sbjct: 397 HAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAA 454
Query: 315 CNAMMGGYVR 324
+ G R
Sbjct: 455 VFGTLLGACR 464
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 16/249 (6%)
Query: 9 QPCNSTQSTLLLLRKCKTLNDVN---QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLT 65
+P +S S+ LL C L+ + QIH + + + T L++ + C L
Sbjct: 281 RPNSSGLSSALL--GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK--CGELG 336
Query: 66 EFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLV 125
+ +K +KKD WNA+I Y+ + +AL +F M+DN + D + V
Sbjct: 337 DA-----WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Query: 126 LKACSRLGLIEEGLQ-IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRD 184
L AC+ GL+ G+ ++R C++ L R G LE A +L M R
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRP 451
Query: 185 SVS-YNSMIDGYVKSGNIESARELFDS-MPIRERNLISWNSVLNGYAQLKSGLQFAWQIF 242
+ + +++ N+E A + + + +N + + N YA K+ + ++
Sbjct: 452 HAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS-KNRWEDVARVR 510
Query: 243 EKMPERDLI 251
++M E +++
Sbjct: 511 KRMKESNVV 519
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 302/546 (55%), Gaps = 44/546 (8%)
Query: 87 WNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLR 146
WN+++ Y L P++A +F M D + S + ++ + G I+E ++ L+
Sbjct: 51 WNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMP 106
Query: 147 KVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYN----------------- 189
+ ++ L+ YV G ++ A LF KM ++ VS+
Sbjct: 107 E----RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACK 162
Query: 190 --------------SMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGL 235
SMI G K G ++ ARE+FD M ER++I+W +++ GY Q + +
Sbjct: 163 LYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS--ERSVITWTTMVTGYGQ-NNRV 219
Query: 236 QFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLG 295
A +IF+ MPE+ +SW SML G V+ G+++DA+ LF+ MP + V++ MI G + G
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 296 RVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
+ ARR+FD M +R+ + ++ + RNG+ ++AL++F MQ + + P +L+ +L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ-GVRPTFPTLISIL 338
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVD 415
S A L + G +H L + QF ++ L+ MY KCG + + +F++ +
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 416 HWNAMINGLAIHGLGELAFDLLMEME-RLSIEPDDITFTGLLNACAHAGLVKEGLLCFEL 474
WN++I+G A HGLGE A + EM S +P+++TF L+AC++AG+V+EGL +E
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 475 MRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLN 534
M + ++P HY CMVD+LGRAG A +I+ M +EP+ +W +LL ACR + L+
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 535 VGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELE 594
V E AK LI ++ NS +Y+LLSNM+A G W D +R +MK R ++K PGCSW E+E
Sbjct: 519 VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Query: 595 GVVHEF 600
VH F
Sbjct: 579 NKVHAF 584
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 174/340 (51%), Gaps = 57/340 (16%)
Query: 187 SYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGY-AQLKSGLQFAWQIFEKM 245
+ N I + G I AR+LFDS +++ SWNS++ GY A L + A ++F++M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDS--CDSKSISSWNSMVAGYFANLMP--RDARKLFDEM 74
Query: 246 PERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFD 305
P+R++ISWN ++ G +K G++D+A+ +FD MP+R+VVSW ++ GY G+VD+A LF
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 306 EMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELY-LHPDDASLVIVLSAIAQLGHI 364
+MP+++ V+ M+ G++++G A C+LY + PD + IA+ I
Sbjct: 135 KMPEKNKVSWTVMLIGFLQDGRIDDA--------CKLYEMIPDKDN-------IARTSMI 179
Query: 365 DKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGL 424
HG+ K G ++ A ++F+++ + SV W M+ G
Sbjct: 180 --------------------HGLC------KEGRVDEAREIFDEMSERSVITWTTMVTGY 213
Query: 425 AIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPE 484
+ + A + M E ++++T +L G +++ FE+M ++P
Sbjct: 214 GQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPV 265
Query: 485 LQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLL 524
+ M+ LG+ G I AR + + M E ND W+T++
Sbjct: 266 IA-CNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 8 NQPCNSTQSTLL-LLRKCKTLNDVN---QIHARMITTGFIKNTHLTTKLVASFSSSPCTP 63
Q T TL+ +L C +L ++ Q+HA+++ F + ++ + L+ + C
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK--CGE 381
Query: 64 LTEFARYIFFKYHAFREKKDPFLWNAIIKTY-SHGLDPKEALVMFCLM-LDNGVSVDKFS 121
L + ++ IF ++ + KD +WN+II Y SHGL +EAL +FC M L ++ +
Sbjct: 382 LVK-SKLIFDRFPS----KDIIMWNSIISGYASHGLG-EEALKVFCEMPLSGSTKPNEVT 435
Query: 122 ASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQN--CLISLYVRCGYLEFARQLFDK 179
L ACS G++EEGL+I+ + V FG + C++ + R G A ++ D
Sbjct: 436 FVATLSACSYAGMVEEGLKIYESMESV-FGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 180 MGIR-DSVSYNSMI 192
M + D+ + S++
Sbjct: 495 MTVEPDAAVWGSLL 508
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 201/577 (34%), Positives = 318/577 (55%), Gaps = 49/577 (8%)
Query: 20 LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFR 79
L + CK+ +NQIHAR+I G ++ +L + ++S SSS + + F
Sbjct: 16 LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS--------VFE 67
Query: 80 EKKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVS-VDKFSASLVLKACSRLGLIE 136
P +LWN +IK YS+ E + + M+ G++ D+++ LV+K CS G +
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 137 EGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV 196
G +HGL+ ++ F D+ + + Y +C + LF
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKC------KDLF------------------- 162
Query: 197 KSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG-LQFAWQIFEKMPERDLISWNS 255
SAR++F MP ERN +SW +++ Y +KSG L+ A +F+ MPER+L SWN+
Sbjct: 163 ------SARKVFGEMP--ERNAVSWTALVVAY--VKSGELEEAKSMFDLMPERNLGSWNA 212
Query: 256 MLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVAC 315
++ G VK G + +A+ LFD+MPKRD++S+ +MIDGYAK G + AR LF+E DV A
Sbjct: 213 LVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAW 272
Query: 316 NAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLE 375
+A++ GY +NG +A ++F M C + PD+ +V ++SA +Q+G + + YL
Sbjct: 273 SALILGYAQNGQPNEAFKVFSEM-CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 376 KDQFSLNGKHGV-ALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAF 434
+ + + V ALIDM +KCG ++ A K+FE++ + + +M+ G+AIHG G A
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 435 DLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDI 494
L +M I PD++ FT +L C + LV+EGL FELMR+ + + HY C+V++
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNL 451
Query: 495 LGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSY 554
L R G ++ A LI+ MP E + W +LL C + N + E VA+HL ++ ++ SY
Sbjct: 452 LSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSY 511
Query: 555 VLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWI 591
VLLSN++A L W D +R M E + K+ G SWI
Sbjct: 512 VLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 328 bits (841), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 220/692 (31%), Positives = 349/692 (50%), Gaps = 92/692 (13%)
Query: 4 SANYNQPC--NSTQSTLL-----LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASF 56
SAN Q C N +S + L R C L +HAR++ + I+N ++ KLV +
Sbjct: 37 SANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLY 96
Query: 57 SSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCL-MLDNGV 115
L AR+ F + +D + WN +I Y + E + F L ML +G+
Sbjct: 97 CYLGNVAL---ARHTFDHI----QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149
Query: 116 SVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQ 175
+ D + VLKAC + +G +IH L K F D+++ LI LY R + AR
Sbjct: 150 TPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206
Query: 176 LFDKMGIRDSVSYNSMIDGYVKSGNIESAREL------FDSMPI---------------- 213
LFD+M +RD S+N+MI GY +SGN + A L DS+ +
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 214 -----------RERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVK 262
E L N +++ YA+ L+ ++F++M RDLISWNS++
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGR-LRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 263 CGKMDDAQALFDKMPKRDV-------VSWANMIDG------------------------- 290
+ A +LF +M + +S A+++
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 291 --------YAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCEL 342
YAKLG VD AR +F+ +P DV++ N ++ GY +NG++ +A+E+++ M+ E
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 343 YLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENA 402
+ + + V VL A +Q G + +G+ +H L K+ L+ +L DMY KCG +E+A
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 403 IKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHA 462
+ +F QI + WN +I HG GE A L EM ++PD ITF LL+AC+H+
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 463 GLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRT 522
GLV EG CFE+M+ + + P L+HYGCMVD+ GRAG +E A I+ M ++P+ IW
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 523 LLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNL 582
LLSACR + N+++G+ ++HL ++ + +VLLSNM+A G W +RS+ + L
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Query: 583 KKLPGCSWIELEGVVHEFFVRDKSRLQVRDIY 614
+K PG S +E++ V F+ +++ ++Y
Sbjct: 686 RKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMY 717
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 16/314 (5%)
Query: 216 RNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGC--VKCGKMDDAQALF 273
R L S SV+ ++ + LQ W+ + E D + +++ C ++ K A+ +
Sbjct: 22 RVLQSIGSVIREFSASANALQDCWKNGNESKEIDDV--HTLFRYCTNLQSAKCLHARLVV 79
Query: 274 DKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALE 333
K + +S A +++ Y LG V +AR FD + RDV A N M+ GY R G S + +
Sbjct: 80 SKQIQNVCIS-AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIR 138
Query: 334 IFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMY 393
F L PD + VL A + ID G IH K F + +LI +Y
Sbjct: 139 CFSLFMLSSGLTPDYRTFPSVLKACRTV--ID-GNKIHCLALKFGFMWDVYVAASLIHLY 195
Query: 394 SKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFT 453
S+ ++ NA +F+++ + WNAMI+G G + A L + + D +T
Sbjct: 196 SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVV 251
Query: 454 GLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPM 513
LL+AC AG G+ + H LE EL ++D+ G + + + + M +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 514 EPNDVI-WRTLLSA 526
D+I W +++ A
Sbjct: 311 R--DLISWNSIIKA 322
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 294/538 (54%), Gaps = 29/538 (5%)
Query: 87 WNAIIKTY-SHGLDPKEALVMFCLMLD------NGVSVDKFSASLVLKACSRLGLIEE-- 137
WN+I+ Y S+GL PKEA +F M + NG+ ++++A + L+ E
Sbjct: 51 WNSIVSGYFSNGL-PKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 138 ----GLQIHGLLRK--VAFGSDLFLQ---------NCLISLYVRCGYLEFARQLFDKMGI 182
+ G +++ V LF + + + G ++ AR+L+D M +
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV 169
Query: 183 RDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIF 242
+D V+ +MI G + G ++ AR +FD M RERN+++W +++ GY Q + + A ++F
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEM--RERNVVTWTTMITGYRQ-NNRVDVARKLF 226
Query: 243 EKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARR 302
E MPE+ +SW SML G G+++DA+ F+ MP + V++ MI G+ ++G + ARR
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 303 LFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLG 362
+FD M RD M+ Y R G+ ++AL++F MQ + + P SL+ +LS A L
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCATLA 345
Query: 363 HIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMIN 422
+ G +H +L + QF + L+ MY KCG + A VF++ + WN++I+
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 423 GLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLE 482
G A HGLGE A + EM P+ +T +L AC++AG ++EGL FE M +
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVT 465
Query: 483 PELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKH 542
P ++HY C VD+LGRAG ++ A LIE M ++P+ +W LL AC+ + L++ E AK
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKK 525
Query: 543 LIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEF 600
L + N+ +YVLLS++ A W D VR M+ N+ K PGCSWIE+ VH F
Sbjct: 526 LFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMF 583
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 214/436 (49%), Gaps = 35/436 (8%)
Query: 123 SLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGI 182
S + SR+G I E + L+ A GS N ++S Y G + ARQLFD+M
Sbjct: 21 SFEISRLSRIGKINEARKFFDSLQFKAIGS----WNSIVSGYFSNGLPKEARQLFDEMSE 76
Query: 183 RDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIF 242
R+ VS+N ++ GY+K+ I AR +F+ MP ERN++SW +++ GY Q + + A +F
Sbjct: 77 RNVVSWNGLVSGYIKNRMIVEARNVFELMP--ERNVVSWTAMVKGYMQ-EGMVGEAESLF 133
Query: 243 EKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARR 302
+MPER+ +SW M G + G++D A+ L+D MP +DVV+ NMI G + GRVD AR
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 303 LFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLG 362
+FDEM +R+VV M+ GY +N A ++F+ M + S +L G
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP-----EKTEVSWTSMLLGYTLSG 248
Query: 363 HIDKGVAIHRYLE-KDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMI 421
I+ + K + N A+I + + G I A +VF+ +ED W MI
Sbjct: 249 RIEDAEEFFEVMPMKPVIACN-----AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 422 NGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIH-- 479
G A DL +M++ + P + +L+ CA ++ G R++H
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG-------RQVHAH 356
Query: 480 ----KLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNV 535
+ + ++ ++ + + G + A+ L+ D + ++W +++S Y + +
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAK-LVFDRFSSKDIIMWNSIISG---YASHGL 412
Query: 536 GEPVAKHLIGMDSSNS 551
GE K M SS +
Sbjct: 413 GEEALKIFHEMPSSGT 428
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 19/244 (7%)
Query: 80 EKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGL 139
E +D W +IK Y EAL +F M GV S +L C+ L ++ G
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 140 QIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSG 199
Q+H L + F D+++ + L+++YV+CG L A+ +FD+ +D + +NS+I GY G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 200 NIESARELFDSMP-----IRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWN 254
E A ++F MP + LI+ + + +L+ GL +IFE M + ++
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL----EIFESMESKFCVTPT 467
Query: 255 SMLHGCV-----KCGKMDDAQALFDKMP-KRDVVSWANMIDGYAKLGRVDI----ARRLF 304
+ C + G++D A L + M K D W ++ R+D+ A++LF
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 305 DEMP 308
+ P
Sbjct: 528 ENEP 531
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 296/521 (56%), Gaps = 16/521 (3%)
Query: 113 NGVSVDKFSASLVLKACSRLGLIE-------EGLQIHGLLRKVAFGSDLFLQNCLISLYV 165
+GV+V +S L + L LI+ E QIH L K SD + +++
Sbjct: 9 SGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCC 68
Query: 166 RCGY-LEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSM----PIRERNLIS 220
+ +A +F ++ ++ +N++I G+ +S E A +F M P + ++
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 128
Query: 221 WNSVLNGYAQL---KSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMP 277
+ SV Y +L + G Q + ++ E D N+MLH V CG + +A +F M
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 278 KRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDN 337
DVV+W +MI G+AK G +D A+ LFDEMP+R+ V+ N+M+ G+VRNG AL++F
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 338 MQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCG 397
MQ E + PD ++V +L+A A LG ++G IH Y+ +++F LN ALIDMY KCG
Sbjct: 249 MQ-EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 398 SIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLN 457
IE + VFE + WN+MI GLA +G E A DL E+ER +EPD ++F G+L
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 458 ACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPND 517
ACAH+G V F LM+ + +EP ++HY MV++LG AG +E A LI++MP+E +
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
Query: 518 VIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMM 577
VIW +LLSACR N+ + + AK L +D + YVLLSN +A G++ +A R +M
Sbjct: 428 VIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLM 487
Query: 578 KERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLD 618
KER ++K GCS IE++ VHEF + + +IY +LD
Sbjct: 488 KERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 255/486 (52%), Gaps = 31/486 (6%)
Query: 19 LLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAF 78
L+ +C T+ ++ QIHA +I TG I +T ++++A +SP +A +F + +
Sbjct: 30 LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSD--MNYAYLVFTRIN-- 85
Query: 79 REKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSV--DKFSASLVLKACSRLGLIE 136
K+PF+WN II+ +S P+ A+ +F ML + SV + + V KA RLG
Sbjct: 86 --HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQAR 143
Query: 137 EGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV 196
+G Q+HG++ K D F++N ++ +YV CG L A ++F M D V++NSMI G+
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 197 KSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDL----IS 252
K G I+ A+ LFD MP +RN +SWNS+++G+ + + A +F +M E+D+ +
Sbjct: 204 KCGLIDQAQNLFDEMP--QRNGVSWNSMISGFVR-NGRFKDALDMFREMQEKDVKPDGFT 260
Query: 253 WNSMLHGCVKCGKMDDAQALFDKMPKR----DVVSWANMIDGYAKLGRVDIARRLFDEMP 308
S+L+ C G + + + + + + + + +ID Y K G ++ +F+ P
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
K+ + N+M+ G NG+ +A+++F ++ L PD S + VL+A A G + +
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 369 AIHRYL-EKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQ--IEDGSVDHWNAMINGLA 425
R + EK + KH ++++ G +E A + + +E+ +V W+++++
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV-IWSSLLSACR 438
Query: 426 IHGLGELAFDLLMEMERLSIEPDDIT-FTGLLNACAHAGLVKEGLLCFELMRRIHKLEPE 484
G E+A +++L +PD+ + L NA A GL +E + LM+ ++E E
Sbjct: 439 KIGNVEMAKRAAKCLKKL--DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE-RQMEKE 495
Query: 485 LQHYGC 490
+ GC
Sbjct: 496 V---GC 498
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 203/619 (32%), Positives = 326/619 (52%), Gaps = 54/619 (8%)
Query: 12 NSTQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYI 71
+ Q L+ T+N + QIH +I +T L L+ T F R
Sbjct: 11 SKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKR---------TLFFRQT 61
Query: 72 FFKYHAFREKKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKAC 129
+ Y F + P FL+N++I + + E L +F + +G+ + F+ LVLKAC
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 130 SRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYN 189
+R + G+ +H SL V+CG+ D +
Sbjct: 122 TRASSRKLGIDLH-------------------SLVVKCGF------------NHDVAAMT 150
Query: 190 SMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPER- 248
S++ Y SG + A +LFD +P +R++++W ++ +GY + A +F+KM E
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIP--DRSVVTWTALFSGYTTSGRHRE-AIDLFKKMVEMG 207
Query: 249 ---DLISWNSMLHGCVKCGKMDDAQALFDKMP----KRDVVSWANMIDGYAKLGRVDIAR 301
D +L CV G +D + + M +++ +++ YAK G+++ AR
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 302 RLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQL 361
+FD M ++D+V + M+ GY N + + +E+F M E L PD S+V LS+ A L
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSIVGFLSSCASL 326
Query: 362 GHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMI 421
G +D G +++ +F N ALIDMY+KCG++ +VF+++++ + NA I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 422 NGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKL 481
+GLA +G +L+F + + E+L I PD TF GLL C HAGL+++GL F + ++ L
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 482 EPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAK 541
+ ++HYGCMVD+ GRAG ++ A LI DMPM PN ++W LLS CR ++ + E V K
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 542 HLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFF 601
LI ++ N+ +YV LSN+++ G W++A VR MM ++ +KK+PG SWIELEG VHEF
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566
Query: 602 VRDKSRLQVRDIYYMLDNM 620
DKS IY L+++
Sbjct: 567 ADDKSHPLSDKIYAKLEDL 585
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/470 (39%), Positives = 277/470 (58%), Gaps = 23/470 (4%)
Query: 170 LEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIES--ARELFDSM---PIRERNLISWNSV 224
L++A ++F++M R+ S+N++I G+ +S ++ A LF M E N ++ SV
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 225 LNGYAQ---LKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDK------ 275
L A+ ++ G Q + D ++++ V CG M DA+ LF K
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 276 ------MPKRD--VVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGY 327
KRD +V W MIDGY +LG AR LFD+M +R VV+ N M+ GY NG+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 328 SMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGV 387
A+E+F M+ + + P+ +LV VL AI++LG ++ G +H Y E ++ G
Sbjct: 255 FKDAVEVFREMK-KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 388 ALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEP 447
ALIDMYSKCG IE AI VFE++ +V W+AMING AIHG A D +M + + P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 448 DDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNL 507
D+ + LL AC+H GLV+EG F M + LEP ++HYGCMVD+LGR+G ++ A
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 508 IEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMW 567
I +MP++P+DVIW+ LL ACR N+ +G+ VA L+ M +S +YV LSNM+A G W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 568 NDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYML 617
++ +R MKE++++K PGCS I+++GV+HEF V D S + ++I ML
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 248/476 (52%), Gaps = 71/476 (14%)
Query: 21 LRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFRE 80
+ C+T+ D++QIHA I +G +++T L A+ C R + + + F +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDT-----LAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 81 --KKDPFLWNAIIKTYSHGLDPKEALVMFCL----MLDNGVSVDKFSASLVLKACSRLGL 134
+++ F WN II+ +S D +AL+ L M D V ++F+ VLKAC++ G
Sbjct: 85 MPQRNCFSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 135 IEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGI------------ 182
I+EG QIHGL K FG D F+ + L+ +YV CG+++ AR LF K I
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 183 RDS--VSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQ 240
RD V +N MIDGY++ G+ ++AR LFD M R+R+++SWN++++GY+ L + A +
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKM--RQRSVVSWNTMISGYS-LNGFFKDAVE 260
Query: 241 IFEKMPERDL----ISWNSMLHGCVKCGKMDDAQALF----DKMPKRDVVSWANMIDGYA 292
+F +M + D+ ++ S+L + G ++ + L D + D V + +ID Y+
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 293 KLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLV 352
K G ++ A +F+ +P+ +V+ +AM+ G+ +G + A++ F M+ + + P D + +
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYI 379
Query: 353 IVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDG 412
+L+A + G +++G RY +S+ S++ +
Sbjct: 380 NLLTACSHGGLVEEG---RRY-------------------FSQMVSVDGL--------EP 409
Query: 413 SVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEG 468
++H+ M++ L GL + A + ++ M I+PDD+ + LL AC G V+ G
Sbjct: 410 RIEHYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMG 462
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 325/672 (48%), Gaps = 75/672 (11%)
Query: 19 LLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSP------------------ 60
L LR+ +L +H +IT GF H+ +L+ + S
Sbjct: 23 LPLRR-TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKI 81
Query: 61 ----------CTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLM 110
+ AR +F K A +D ++NA+I +SH D A+ +FC M
Sbjct: 82 ARTTMVSGYCASGDITLARGVFEK--APVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM 139
Query: 111 LDNGVSVDKFSASLVLKACSRLGLIE-EGLQIHGLLRKVAFGSDLFLQNCLISLYVRCG- 168
G D F+ + VL + + E + +Q H K G + N L+S+Y +C
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 169 ---YLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVL 225
L AR++FD++ +D S+ +M+ GYVK+G + EL + M + L+++N+++
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK-LVAYNAMI 258
Query: 226 NGYAQ---LKSGLQFAWQIFEKMPERDLISWNSMLHGCV--------------------- 261
+GY + L+ ++ E D ++ S++ C
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 262 -------------KCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMP 308
KCGK D+A+A+F+KMP +D+VSW ++ GY G + A+ +F EM
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
++++++ M+ G NG+ + L++F M+ E + P D + + + A LG G
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF-EPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 369 AIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHG 428
H L K F + G ALI MY+KCG +E A +VF + WNA+I L HG
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Query: 429 LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHY 488
G A D+ EM + I PD IT +L AC+HAGLV +G F+ M ++++ P HY
Sbjct: 498 HGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY 557
Query: 489 GCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDS 548
++D+L R+G A ++IE +P +P IW LLS CR + N+ +G A L G+
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 549 SNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRL 608
+ +Y+LLSNM A G W + RVR +M++R +KK CSWIE+E VH F V D S
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Query: 609 QVRDIYYMLDNM 620
+ +Y L ++
Sbjct: 678 EAEAVYIYLQDL 689
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 212/487 (43%), Gaps = 83/487 (17%)
Query: 117 VDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQL 176
++++A+L L R ++ +HG + F + N LI +Y + L +ARQL
Sbjct: 12 ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 177 FDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQ 236
FD++ D ++ +M+ GY SG+I AR +F+ P+ R+ + +N+++ G++ G
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS 131
Query: 237 FAWQIFEKMPER----DLISWNSMLHG----------CV--------------------- 261
A +F KM D ++ S+L G CV
Sbjct: 132 -AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNAL 190
Query: 262 -----KCGK----MDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKR-D 311
KC + A+ +FD++ ++D SW M+ GY K G D+ L + M
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 312 VVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIH 371
+VA NAM+ GYV G+ +ALE+ M + D+ + V+ A A G + G +H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 372 RY-LEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNA----------- 419
Y L ++ FS + + +L+ +Y KCG + A +FE++ + WNA
Sbjct: 310 AYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 420 --------------------MINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNAC 459
MI+GLA +G GE L M+R EP D F+G + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 460 AHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVI 519
A G G + +I + L ++ + + G +E AR + MP + V
Sbjct: 428 AVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVS 485
Query: 520 WRTLLSA 526
W L++A
Sbjct: 486 WNALIAA 492
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 212/709 (29%), Positives = 346/709 (48%), Gaps = 94/709 (13%)
Query: 2 FVSANYNQPCNSTQ-STLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSP 60
F+S P N + LLL +C +L ++ QI + G + TKLV+ F
Sbjct: 24 FLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY- 82
Query: 61 CTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKF 120
+ E AR +F + K L++ ++K ++ D +AL F M + V +
Sbjct: 83 -GSVDEAAR-VFEPI----DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVY 136
Query: 121 SASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKM 180
+ + +LK C + G +IHGLL K F DLF L ++Y +C + AR++FD+M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 181 GIRDSVSYNSMIDGYVKSGNIESARELFDSM-----------------PIRERNLISWNS 223
RD VS+N+++ GY ++G A E+ SM + LIS
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 224 VLNGYAQLKSG--------------------LQFAWQIFEKMPERDLISWNSMLHGCVKC 263
++GYA ++SG L+ A Q+F+ M ER+++SWNSM+ V+
Sbjct: 257 EIHGYA-MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 264 GKMDDAQALFDKM------PK---------------------------------RDVVSW 284
+A +F KM P R+V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 285 ANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYL 344
++I Y K VD A +F ++ R +V+ NAM+ G+ +NG + AL F M+ +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-V 434
Query: 345 HPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIK 404
PD + V V++AIA+L IH + + N AL+DMY+KCG+I A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 405 VFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGL 464
+F+ + + V WNAMI+G HG G+ A +L EM++ +I+P+ +TF +++AC+H+GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 465 VKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLL 524
V+ GL CF +M+ + +E + HYG MVD+LGRAG + A + I MP++P ++ +L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 525 SACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKK 584
AC+ ++N+N E A+ L ++ + +VLL+N++ MW +VR M + L+K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 585 LPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNM--------WTPDS 625
PGCS +E++ VH FF + + IY L+ + + PD+
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT 723
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 321/612 (52%), Gaps = 76/612 (12%)
Query: 81 KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQ 140
K D FLWN +IK ++ EA+ + M+ GV D F+ V+K+ + + +EEG +
Sbjct: 92 KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKK 151
Query: 141 IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN 200
IH ++ K+ F SD+++ N LISLY++ G A ++F++M RD VS+NSMI GY+ G+
Sbjct: 152 IHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD 211
Query: 201 IESARELFDSM----------------------------------PIRER----NLISWN 222
S+ LF M +R R +++
Sbjct: 212 GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT 271
Query: 223 SVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKR--- 279
S+L+ Y++ + +A +IF M +R++++WN M+ + G++ DA F KM ++
Sbjct: 272 SILDMYSKYGE-VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL 330
Query: 280 --DVVSWANM-------------------------------IDGYAKLGRVDIARRLFDE 306
DV++ N+ ID Y + G++ A +FD
Sbjct: 331 QPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDR 390
Query: 307 MPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDK 366
M +++V++ N+++ YV+NG + ALE+F + + L PD ++ +L A A+ + +
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILPAYAESLSLSE 449
Query: 367 GVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAI 426
G IH Y+ K ++ N +L+ MY+ CG +E+A K F I V WN++I A+
Sbjct: 450 GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 427 HGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQ 486
HG G ++ L EM + P+ TF LL AC+ +G+V EG FE M+R + ++P ++
Sbjct: 510 HGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Query: 487 HYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGM 546
HYGCM+D++GR G+ AA+ +E+MP P IW +LL+A RN++++ + E A+ + M
Sbjct: 570 HYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKM 629
Query: 547 DSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKS 606
+ N+ YVLL NM+A G W D R++ +M+ + + + S +E +G H F D+S
Sbjct: 630 EHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRS 689
Query: 607 RLQVRDIYYMLD 618
+ IY +LD
Sbjct: 690 HVATNKIYEVLD 701
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 188/440 (42%), Gaps = 96/440 (21%)
Query: 170 LEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSM------------PIRERN 217
+E A QLFD+M D+ +N MI G+ G A + + M P ++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 218 LISWNS---------------------VLNGYAQLKSGLQFAW---QIFEKMPERDLISW 253
+ +S V N L L AW ++FE+MPERD++SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 254 NSMLHGCVKCGKMDDAQALFDKM------PKR---------------------------- 279
NSM+ G + G + LF +M P R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 280 ------DVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALE 333
DV+ +++D Y+K G V A R+F+ M +R++VA N M+G Y RNG A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 334 IFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMY 393
F M + L PD + + +L A A L +G IH Y + F + ALIDMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 394 SKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFT 453
+CG +++A +F+++ + +V WN++I +G A +L E+ S+ PD T
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 454 GLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYG------CMVDILGRAGHIEAARNL 507
+L A A + + EG R IH + +++ +V + G +E AR
Sbjct: 436 SILPAYAESLSLSEG-------REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 508 IEDMPMEPNDVI-WRTLLSA 526
+ ++ DV+ W +++ A
Sbjct: 489 FNHILLK--DVVSWNSIIMA 506
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 165/382 (43%), Gaps = 69/382 (18%)
Query: 225 LNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKM----PKRD 280
L G+A + ++ A Q+F++M + D WN M+ G CG +A + +M K D
Sbjct: 71 LRGFADSRL-MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKAD 129
Query: 281 VVSWA-----------------------------------NMIDGYAKLGRVDIARRLFD 305
++ ++I Y KLG A ++F+
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 306 EMPKRDVVACNAMMGGYVRNGYSMKALEIFDNM-QCELYLHPDDASLVIVLSAIAQLGHI 364
EMP+RD+V+ N+M+ GY+ G +L +F M +C PD S + L A + +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG--FKPDRFSTMSALGACSHVYSP 247
Query: 365 DKGVAIHRYLEKDQFSLNGKHGV-ALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMING 423
G IH + + + + +++DMYSK G + A ++F + ++ WN MI
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 424 LAIHGLGELAFDLLMEM-ERLSIEPDDITFTGLLNACA-------HAGLVKEGLLCFELM 475
A +G AF +M E+ ++PD IT LL A A H ++ G L
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL----- 362
Query: 476 RRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSA----CRNYE 531
P + ++D+ G G +++A + + M E N + W ++++A +NY
Sbjct: 363 -------PHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYS 414
Query: 532 NLNVGEPVAKHLIGMDSSNSSS 553
L + + + + DS+ +S
Sbjct: 415 ALELFQELWDSSLVPDSTTIAS 436
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 308/573 (53%), Gaps = 24/573 (4%)
Query: 21 LRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFRE 80
L C++L ++NQ+H MI + I+N ++L+ ++ P T +AR +F
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC--- 69
Query: 81 KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQ 140
++WN++I+ YS+ +P +AL+ + ML G S D F+ VLKACS L I+ G
Sbjct: 70 -PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 141 IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN 200
+HG + K F ++++ CL+ +Y+ CG + + ++F+ + + V++ S+I G+V +
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 201 IESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGC 260
A E F M + N + N + + G +D+++ HG
Sbjct: 189 FSDAIEAFREM---QSNGVKANETIMVDLLVACGRC-----------KDIVT-GKWFHGF 233
Query: 261 VKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMG 320
++ D F +V+ ++ID YAK G + AR LFD MP+R +V+ N+++
Sbjct: 234 LQGLGFD---PYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIIT 290
Query: 321 GYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFS 380
GY +NG + +AL +F +M +L + PD + + V+ A G G +IH Y+ K F
Sbjct: 291 GYSQNGDAEEALCMFLDM-LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFV 349
Query: 381 LNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEM 440
+ AL++MY+K G E+A K FE +E W +I GLA HG G A + M
Sbjct: 350 KDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
Query: 441 -ERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAG 499
E+ + PD IT+ G+L AC+H GLV+EG F MR +H LEP ++HYGCMVDIL RAG
Sbjct: 410 QEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAG 469
Query: 500 HIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSN 559
E A L++ MP++PN IW LL+ C +ENL + + + + + S YVLLSN
Sbjct: 470 RFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSN 529
Query: 560 MFAGLGMWNDARRVRSMMKERNLKKLPGCSWIE 592
++A G W D + +R MK + + K+ G S +E
Sbjct: 530 IYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 304/595 (51%), Gaps = 44/595 (7%)
Query: 32 QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIF-FKYHAFREKKDPFLWNAI 90
QIHA ++ G + L L+ S+ + R I K K+ W +
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSY--------VKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 91 IKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAF 150
+ Y KEA+ +F M G+ D ++ S +L +C+ L + G Q+H K
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 151 GSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN---IESAREL 207
G+D ++ N LI +Y +C L AR++FD D V +N+MI+GY + G + A +
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 208 FDSMPIR--ERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGK 265
F M R +L+++ S+L A L S + + +HG
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTS-----------------LGLSKQIHGL----- 479
Query: 266 MDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRN 325
+F D+ + + +ID Y+ + +R +FDEM +D+V N+M GYV+
Sbjct: 480 ------MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 326 GYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKH 385
+ +AL +F +Q PD+ + +++A L + G H L K N
Sbjct: 534 SENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYI 592
Query: 386 GVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSI 445
AL+DMY+KCGS E+A K F+ V WN++I+ A HG G+ A +L +M I
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI 652
Query: 446 EPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAAR 505
EP+ ITF G+L+AC+HAGLV++GL FELM R +EPE +HY CMV +LGRAG + AR
Sbjct: 653 EPNYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNKAR 711
Query: 506 NLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLG 565
LIE MP +P ++WR+LLS C N+ + E A+ I D +S S+ +LSN++A G
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKG 771
Query: 566 MWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNM 620
MW +A++VR MK + K PG SWI + VH F +DKS + IY +LD++
Sbjct: 772 MWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 233/532 (43%), Gaps = 80/532 (15%)
Query: 31 NQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAI 90
N +H ++I G +T+L+ L+ +S + +AR +F K +++ W+ +
Sbjct: 64 NVVHGQIIVWGLELDTYLSNILINLYSRAGGMV---YARKVFEKM----PERNLVSWSTM 116
Query: 91 IKTYSHGLDPKEALVMFC-LMLDNGVSVDKFSASLVLKACSRLGLIEEG----LQIHGLL 145
+ +H +E+LV+F S +++ S ++ACS GL G Q+ L
Sbjct: 117 VSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFL 174
Query: 146 RKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESAR 205
K F D+++ LI Y++ G +++AR +FD + + +V++ +MI G VK G +
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 206 ELFDSMPIRERNLISWNSVLNGYAQ-------LKSGLQFAWQIFEKMPERDLISWNSMLH 258
+LF + E N++ +L+ L+ G Q I E D N ++
Sbjct: 235 QLF--YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 259 GCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAM 318
VKCG++ A LF+ MP ++++SW ++ GY +
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ------------------------- 327
Query: 319 MGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQ 378
N +A+E+F +M + L PD + +L++ A L + G +H Y K
Sbjct: 328 ------NALHKEAMELFTSMS-KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
Query: 379 FSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLG-EL--AFD 435
+ +LIDMY+KC + +A KVF+ V +NAMI G + G EL A +
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 436 LLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDIL 495
+ +M I P +TF LL A A L L ++IH L + YG +DI
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRASA-------SLTSLGLSKQIHGL---MFKYGLNLDIF 490
Query: 496 GRAGHIEAARN--------LIEDMPMEPNDVIWRTLLSA----CRNYENLNV 535
+ I+ N L+ D + VIW ++ + N E LN+
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 312 bits (799), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 294/536 (54%), Gaps = 39/536 (7%)
Query: 118 DKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLF 177
D + + V+ +LG + E + L +V ++ ++S Y+R L A LF
Sbjct: 76 DVVTWTHVITGYIKLGDMREARE---LFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 178 DKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQF 237
+M R+ VS+N+MIDGY +SG I+ A ELFD MP ERN++SWNS++ Q + +
Sbjct: 133 QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP--ERNIVSWNSMVKALVQ-RGRIDE 189
Query: 238 AWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRV 297
A +FE+MP RD++SW +M+ G K GK+D+A+ LFD MP+R+++SW MI GYA+ R+
Sbjct: 190 AMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 298 DIARRLFDEMPKRDVVACNAMMGGYVRN--------------------------GY---- 327
D A +LF MP+RD + N M+ G++RN GY
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 328 -SMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHG 386
+ +AL +F M + + P+ + V +LSA + L + +G IH+ + K N
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVT 369
Query: 387 VALIDMYSKCGSIENAIKVFEQ--IEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLS 444
AL++MYSK G + A K+F+ + + WN+MI A HG G+ A ++ +M +
Sbjct: 370 SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
Query: 445 IEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAA 504
+P +T+ LL AC+HAGLV++G+ F+ + R L +HY C+VD+ GRAG ++
Sbjct: 430 FKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV 489
Query: 505 RNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGL 564
N I + + +LSAC + +++ + V K ++ S ++ +YVL+SN++A
Sbjct: 490 TNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAAN 549
Query: 565 GMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNM 620
G +A +R MKE+ LKK PGCSW+++ H F V DKS Q + +L ++
Sbjct: 550 GKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 213/370 (57%), Gaps = 18/370 (4%)
Query: 160 LISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLI 219
LI + G + AR+LFD + RD V++ +I GY+K G++ ARELFD + R +N++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR-KNVV 110
Query: 220 SWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKR 279
+W ++++GY + K L A +F++MPER+++SWN+M+ G + G++D A LFD+MP+R
Sbjct: 111 TWTAMVSGYLRSKQ-LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 280 DVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQ 339
++VSW +M+ + GR+D A LF+ MP+RDVV+ AM+ G +NG +A +FD M
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 340 CELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYL-EKDQFSLNGKHGVALIDMYSKCGS 398
+ S +++ AQ ID+ + + + E+D S N +I + +
Sbjct: 230 -----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWN-----TMITGFIRNRE 279
Query: 399 IENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMER-LSIEPDDITFTGLLN 457
+ A +F+++ + +V W MI G + E A ++ +M R S++P+ T+ +L+
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 458 ACAH-AGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPN 516
AC+ AGLV EG +L+ + + E+ ++++ ++G + AAR + ++ +
Sbjct: 340 ACSDLAGLV-EGQQIHQLISKSVHQKNEIV-TSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 517 DVI-WRTLLS 525
D+I W ++++
Sbjct: 398 DLISWNSMIA 407
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 224/462 (48%), Gaps = 67/462 (14%)
Query: 87 WNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLR 146
WN +I Y+ +AL +F M + + S + ++KA + G I+E + + +
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 147 KVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARE 206
+ D+ ++ + G ++ AR+LFD M R+ +S+N+MI GY ++ I+ A +
Sbjct: 199 R----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 207 LFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKM 266
LF MP ER+ SWN+++ G+ + + + A +F++MPE+++ISW +M+ G V+ +
Sbjct: 255 LFQVMP--ERDFASWNTMITGFIRNRE-MNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 267 DDAQALFDKM-----------------------------------------PKRDVVSWA 285
++A +F KM K ++V+ A
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 286 NMIDGYAKLGRVDIARRLFDE--MPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELY 343
+++ Y+K G + AR++FD + +RD+++ N+M+ Y +G+ +A+E+++ M+ +
Sbjct: 372 -LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 344 LHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQ-FSLNGKHGVALIDMYSKCGSIENA 402
P + + +L A + G ++KG+ + L +D+ L +H L+D+ + G +++
Sbjct: 431 -KPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKD- 488
Query: 403 IKVFEQIEDG--SVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDI-TFTGLLNAC 459
+ F +D S + A+++ +H +A +++ ++ L DD T+ + N
Sbjct: 489 VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKV--LETGSDDAGTYVLMSNIY 546
Query: 460 AHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHI 501
A G +E MR K + + GC +G+ H+
Sbjct: 547 AANGKREEAA----EMRMKMKEKGLKKQPGCSWVKVGKQNHL 584
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 24/177 (13%)
Query: 38 ITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHG 97
+ TGFI+N + K F P +K+ W +I Y
Sbjct: 270 MITGFIRNREMN-KACGLFDRMP--------------------EKNVISWTTMITGYVEN 308
Query: 98 LDPKEALVMFCLMLDNG-VSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFL 156
+ +EAL +F ML +G V + + +L ACS L + EG QIH L+ K + +
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 157 QNCLISLYVRCGYLEFARQLFDKMGI--RDSVSYNSMIDGYVKSGNIESARELFDSM 211
+ L+++Y + G L AR++FD + RD +S+NSMI Y G+ + A E+++ M
Sbjct: 369 TSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 32 QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAII 91
QIH + + KN +T+ L+ +S S AR +F + ++D WN++I
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIA---ARKMF--DNGLVCQRDLISWNSMI 406
Query: 92 KTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQ-IHGLLRKVAF 150
Y+H KEA+ M+ M +G + +L ACS GL+E+G++ L+R +
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 151 GSDLFLQNCLISLYVRCGYLE 171
CL+ L R G L+
Sbjct: 467 PLREEHYTCLVDLCGRAGRLK 487
>sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protein At3g21470
OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1
Length = 523
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 300/512 (58%), Gaps = 14/512 (2%)
Query: 90 IIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACS-RLGLIEEGLQIHGLLRKV 148
+IK + P +ALV++ + GV + L+L+AC+ + + G +H K
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESIKF 75
Query: 149 AFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELF 208
SD+ + + LIS+Y +CG + AR++FD+M R+ ++N+MI GY+ +G+ A LF
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 209 DSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMP--ERDLISWNSMLHGCVKCGKM 266
+ + + RN ++W ++ GY + + ++ A ++FE+MP +++ +W+ ML V KM
Sbjct: 136 EEISVC-RNTVTWIEMIKGYGK-RIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 267 DDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNG 326
+DA+ F+ +P+++ W+ M+ GY ++G V AR +F + RD+V N ++ GY +NG
Sbjct: 194 EDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNG 253
Query: 327 YSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHG 386
YS A++ F NMQ E Y PD ++ +LSA AQ G +D G +H + LN
Sbjct: 254 YSDDAIDAFFNMQGEGY-EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 312
Query: 387 VALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIE 446
ALIDMY+KCG +ENA VFE I SV N+MI+ LAIHG G+ A ++ ME L ++
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLK 372
Query: 447 PDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARN 506
PD+ITF +L AC H G + EGL F M + ++P ++H+GC++ +LGR+G ++ A
Sbjct: 373 PDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 507 LIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSY-----VLLSNMF 561
L+++M ++PND + LL AC+ + + + E V K +I S ++SY +SN++
Sbjct: 432 LVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLY 490
Query: 562 AGLGMWNDARRVRSMMKERNLKKLPGCSWIEL 593
A W A +R M++R L+K PG S + L
Sbjct: 491 AHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 68 ARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLK 127
AR IF++ A +D +WN +I Y+ +A+ F M G D + S +L
Sbjct: 227 ARAIFYRVFA----RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 128 ACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVS 187
AC++ G ++ G ++H L+ + F+ N LI +Y +CG LE A +F+ + +R
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 342
Query: 188 YNSMIDGYVKSGNIESARELFDSMPIRE--RNLISWNSVLNGYAQLKSG-LQFAWQIFEK 244
NSMI G + A E+F +M + + I++ +VL A + G L +IF +
Sbjct: 343 CNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT--ACVHGGFLMEGLKIFSE 400
Query: 245 MPERDLISWNSMLHGCV-----KCGKMDDAQALFDKM 276
M +D + N GC+ + GK+ +A L +M
Sbjct: 401 MKTQD-VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 336/646 (52%), Gaps = 76/646 (11%)
Query: 9 QPCNSTQSTLLLLRKCKTLNDVN---QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLT 65
+ ++ ++ + L C + NDV QIH R++ +G N ++ ++ ++ C L
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYA--KCRLLA 93
Query: 66 E----FARYIFFKYHAFREKKDPF-----LWNAI-----------------IKTYSHGLD 99
+ F + +F D + LW+A+ IK Y+
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 100 PKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNC 159
EA+ +F M + G+ +++ + + V+ ACS LG I + + L K+ +F+
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 160 LISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLI 219
L+ +Y C L+ AR+LFD+M R+ V++N M++GY K+G IE A ELFD I E++++
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQ--ITEKDIV 271
Query: 220 SWNSVLNGYAQLKSGLQFAWQIFEKM------PER----DLISWNS---------MLHGC 260
SW ++++G + K+ L A + +M P DL+S ++ LHG
Sbjct: 272 SWGTMIDGCLR-KNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGT 330
Query: 261 V-----KCGKMDDAQAL---------------FDKMPKRDVVSWANMIDGYAKLGRVDIA 300
+ C A + F+ K + S +I G+ K G V+ A
Sbjct: 331 IVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQA 390
Query: 301 RRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQ 360
R +FD+ +D+ + NAM+ GY ++ AL +F M + PD ++V V SAI+
Sbjct: 391 REVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISS 450
Query: 361 LGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQ---IEDGSVDHW 417
LG +++G H YL N A+IDMY+KCGSIE A+ +F Q I ++ W
Sbjct: 451 LGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPW 510
Query: 418 NAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRR 477
NA+I G A HG +LA DL +++ L I+P+ ITF G+L+AC HAGLV+ G FE M+
Sbjct: 511 NAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKS 570
Query: 478 IHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGE 537
H +EP+++HYGCMVD+LG+AG +E A+ +I+ MP++ + +IW LLSA R + N+ + E
Sbjct: 571 DHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAE 630
Query: 538 PVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLK 583
A L +D S+ V+LSN++A G W D VR M+ R+++
Sbjct: 631 LAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/587 (32%), Positives = 308/587 (52%), Gaps = 49/587 (8%)
Query: 15 QSTLL-LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFF 73
+S LL L+ +C +L QI ++IT +++ + K+V S +FA Y
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKS-----ADFASYSSV 60
Query: 74 KYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLG 133
H+ R F +N ++ +Y+ P+ + + + NG S D F+ V KAC +
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFS 120
Query: 134 LIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMID 193
I EG QIHG++ K+ F D+++QN L+ Y C
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVC-------------------------- 154
Query: 194 GYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGL-QFAWQIFEKMP-ERDLI 251
G +A ++F MP+R+ ++SW ++ G+ ++GL + A F KM E +L
Sbjct: 155 -----GESRNACKVFGEMPVRD--VVSWTGIITGFT--RTGLYKEALDTFSKMDVEPNLA 205
Query: 252 SWNSMLHGCVKCGKMDDAQALFDKMPKR-DVVSWAN---MIDGYAKLGRVDIARRLFDEM 307
++ +L + G + + + + KR ++S +ID Y K ++ A R+F E+
Sbjct: 206 TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 308 PKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKG 367
K+D V+ N+M+ G V S +A+++F MQ + PD L VLSA A LG +D G
Sbjct: 266 EKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325
Query: 368 VAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIH 427
+H Y+ + G A++DMY+KCG IE A+++F I +V WNA++ GLAIH
Sbjct: 326 RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIH 385
Query: 428 GLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMR-RIHKLEPELQ 486
G G + EM +L +P+ +TF LNAC H GLV EG F M+ R + L P+L+
Sbjct: 386 GHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLE 445
Query: 487 HYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENL-NVGEPVAKHLIG 545
HYGCM+D+L RAG ++ A L++ MP++P+ I +LSAC+N L + + + +
Sbjct: 446 HYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLD 505
Query: 546 MDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIE 592
++ +S YVLLSN+FA W+D R+R +MK + + K+PG S+IE
Sbjct: 506 IEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 332/662 (50%), Gaps = 94/662 (14%)
Query: 15 QSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFK 74
QS L ++++ +H +IT G + L+T S + + C +T +AR +F +
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGGRVSGHILST---LSVTYALCGHIT-YARKLFEE 74
Query: 75 YHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSV--DKFSASLVLKACSRL 132
+ +N +I+ Y +A+ +F M+ GV D ++ V KA L
Sbjct: 75 M----PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 133 GLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMI 192
++ GL +HG + + FG D ++QN L+++Y+ G +E AR +FD M RD +S+N+MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 193 DGYVKSGNIESARELFD-----SMPIRERNLISW-------------------------- 221
GY ++G + A +FD S+ + ++S
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 222 ------NSVLNGYAQLKSG-LQFAWQIFEKMPERDLISWNSMLHGCVK------------ 262
N+++N Y LK G + A +F++M RD+I+W M++G +
Sbjct: 251 DKIEVKNALVNMY--LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 263 --------------------CG---KMDDAQALFDKMPKR----DVVSWANMIDGYAKLG 295
CG K++D + L ++ D++ ++I YAK
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 296 RVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
RVD+ R+F K +A++ G V+N AL +F M+ E + P+ A+L +L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-DVEPNIATLNSLL 427
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDG--- 412
A A L + + + IH YL K F + L+ +YSKCG++E+A K+F I++
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 413 -SVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLC 471
V W A+I+G +HG G A + MEM R + P++ITFT LNAC+H+GLV+EGL
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 472 FELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYE 531
F M +K HY C+VD+LGRAG ++ A NLI +P EP +W LL+AC +E
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE 607
Query: 532 NLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWI 591
N+ +GE A L ++ N+ +YVLL+N++A LG W D +VRSMM+ L+K PG S I
Sbjct: 608 NVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Query: 592 EL 593
E+
Sbjct: 668 EI 669
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 232/357 (64%), Gaps = 1/357 (0%)
Query: 262 KCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGG 321
K G + AQ +FD+MP+R +VS MI YAK G V+ AR LFD M +RD+V+ N M+ G
Sbjct: 173 KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDG 232
Query: 322 YVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSL 381
Y ++G+ AL +F + E PD+ ++V LSA +Q+G ++ G IH +++ + L
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 382 NGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEME 441
N K LIDMYSKCGS+E A+ VF + WNAMI G A+HG + A L EM+
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 442 RLS-IEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGH 500
++ ++P DITF G L ACAHAGLV EG+ FE M + + ++P+++HYGC+V +LGRAG
Sbjct: 353 GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQ 412
Query: 501 IEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNM 560
++ A I++M M+ + V+W ++L +C+ + + +G+ +A++LIG++ NS YVLLSN+
Sbjct: 413 LKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNI 472
Query: 561 FAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYML 617
+A +G + +VR++MKE+ + K PG S IE+E VHEF D+ + ++IY ML
Sbjct: 473 YASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTML 529
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 227/430 (52%), Gaps = 40/430 (9%)
Query: 19 LLLRKCKTLNDVNQIHARMITTGFIKNTH---LTTKLVASFSSSPCTPLTEFARYIFFKY 75
+L+ K +++++V QIHA ++ + + L KL +++S I
Sbjct: 34 VLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHG---------KIRHSL 84
Query: 76 HAFREKKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLG 133
F + DP FL+ A I T S +A +++ +L + ++ ++F+ S +LK+CS
Sbjct: 85 ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS--- 141
Query: 134 LIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMID 193
+ G IH + K G D ++ L+ +Y + G + A+++FD+M R VS +MI
Sbjct: 142 -TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 194 GYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKM-----PER 248
Y K GN+E+AR LFDSM ER+++SWN +++GYAQ A +F+K+ P+
Sbjct: 201 CYAKQGNVEAARALFDSMC--ERDIVSWNVMIDGYAQ-HGFPNDALMLFQKLLAEGKPKP 257
Query: 249 DLISWNSMLHGCVKCGKMDDAQ--ALFDKMP--KRDVVSWANMIDGYAKLGRVDIARRLF 304
D I+ + L C + G ++ + +F K + +V +ID Y+K G ++ A +F
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF 317
Query: 305 DEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHI 364
++ P++D+VA NAM+ GY +GYS AL +F+ MQ L P D + + L A A G +
Sbjct: 318 NDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLV 377
Query: 365 DKGVAIHRYLEKDQFSLNGK--HGVALIDMYSKCGSIENAIKVFEQIEDGSVDH----WN 418
++G+ I + + ++ + K H L+ + + G ++ A +E I++ ++D W+
Sbjct: 378 NEGIRIFESMGQ-EYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKNMNMDADSVLWS 433
Query: 419 AMINGLAIHG 428
+++ +HG
Sbjct: 434 SVLGSCKLHG 443
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 347/697 (49%), Gaps = 96/697 (13%)
Query: 3 VSANYNQPCNSTQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCT 62
VS ++ + S L L K+L D ++ + GF+ +++L +KL S + C
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL--SLMYTNCG 143
Query: 63 PLTEFARYIFFKYHAFREKK--DPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKF 120
L E +R F E K WN ++ + D ++ +F M+ +GV +D +
Sbjct: 144 DLKEASR-------VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 121 SASLVLKACSRLGLIEEGLQIHGLLRKVAFGS---------------------------- 152
+ S V K+ S L + G Q+HG + K FG
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 153 ---DLFLQNCLISLYVRCGYLEFARQLFDKM----------------------------- 180
D+ N +I+ YV G E +F +M
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 181 -----GIRDSVSY-----NSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQ 230
G++ S N+++D Y K G+++SA+ +F M +R+++S+ S++ GYA
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS--DRSVVSYTSMIAGYA- 373
Query: 231 LKSGLQF-AWQIFEKMPER----DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDV---- 281
+ GL A ++FE+M E D+ + ++L+ C + +D+ + + + + + D+
Sbjct: 374 -REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 282 -VSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQC 340
VS A ++D YAK G + A +F EM +D+++ N ++GGY +N Y+ +AL +F+ +
Sbjct: 433 FVSNA-LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 341 ELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIE 400
E PD+ ++ VL A A L DKG IH Y+ ++ + + +L+DMY+KCG++
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 401 NAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACA 460
A +F+ I + W MI G +HG G+ A L +M + IE D+I+F LL AC+
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 461 HAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIW 520
H+GLV EG F +MR K+EP ++HY C+VD+L R G + A IE+MP+ P+ IW
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 521 RTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKER 580
LL CR + ++ + E VA+ + ++ N+ YVL++N++A W +R+R + +R
Sbjct: 672 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 731
Query: 581 NLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYML 617
L+K PGCSWIE++G V+ F D S + +I L
Sbjct: 732 GLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFL 768
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 305 bits (782), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 204/683 (29%), Positives = 331/683 (48%), Gaps = 92/683 (13%)
Query: 18 LLLLRKC----KTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSP--CTPLTEFARYI 71
L LLR+C K+L + +H R++T G ++ L L+ + + C+ AR++
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCS-----ARHV 61
Query: 72 FFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSV-DKFSASLVLKACS 130
F F + D ++WN+++ YS + L +F +L+ + V D F+ V+KA
Sbjct: 62 F---ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYG 118
Query: 131 RLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNS 190
LG G IH L+ K + D+ + + L+ +Y + E + Q+FD+M RD S+N+
Sbjct: 119 ALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNT 178
Query: 191 MIDGYVKSGNIESARELFDSMPIR--ERNLISWNSVLNGYAQL--------------KSG 234
+I + +SG E A ELF M E N +S ++ ++L K G
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 235 --------------------LQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFD 274
L+ A ++F+KMP + L++WNSM+ G V G + +
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 275 KM------PKR---------------------------------DVVSWANMIDGYAKLG 295
+M P + D+ ++ID Y K G
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 296 RVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVL 355
++A +F + K + N M+ Y+ G KA+E++D M + + PD + VL
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVL 417
Query: 356 SAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVD 415
A +QL ++KG IH + + + + AL+DMYSKCG+ + A ++F I V
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 416 HWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELM 475
W MI+ HG A EM++ ++PD +T +L+AC HAGL+ EGL F M
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 476 RRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMP-MEPNDVIWRTLLSACRNYENLN 534
R + +EP ++HY CM+DILGRAG + A +I+ P N + TL SAC + +
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 535 VGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELE 594
+G+ +A+ L+ ++S+Y++L N++A W+ ARRVR MKE L+K PGCSWIE+
Sbjct: 598 LGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Query: 595 GVVHEFFVRDKSRLQVRDIYYML 617
V FF D+S L+ ++Y L
Sbjct: 658 DKVCHFFAEDRSHLRAENVYECL 680
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 305 bits (780), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 337/682 (49%), Gaps = 82/682 (12%)
Query: 13 STQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIF 72
S + L ++ +++ + Q HA++I GF + L TKL S +AR IF
Sbjct: 19 SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAI---YYARDIF 75
Query: 73 FKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFC-LMLDNGVSVDKFSASLVLKACSR 131
++ D FL+N +++ +S P +L +F L + + + + + A S
Sbjct: 76 LSV----QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 132 LGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSM 191
G IHG S+L L + ++ +Y + +E AR++FD+M +D++ +N+M
Sbjct: 132 FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 192 IDGYVKSG----NIESAREL-------------FDSMP----IRERNL------------ 218
I GY K+ +I+ R+L D +P ++E L
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 219 -ISWNSVLNGYAQLKSG---LQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFD 274
S + VL G+ L S ++ +F + + D++++N+M+HG G+ + + +LF
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 275 KM----------------P----------------KRDVVSWANMIDG----YAKLGRVD 298
++ P K + +S A++ Y+KL ++
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 299 IARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAI 358
AR+LFDE P++ + + NAM+ GY +NG + A+ +F MQ + P+ ++ +LSA
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF-SPNPVTITCILSAC 430
Query: 359 AQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWN 418
AQLG + G +H + F + ALI MY+KCGSI A ++F+ + + WN
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 419 AMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRI 478
MI+G +HG G+ A ++ EM I P +TF +L AC+HAGLVKEG F M
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 479 HKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEP 538
+ EP ++HY CMVDILGRAGH++ A IE M +EP +W TLL ACR +++ N+
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 539 VAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVH 598
V++ L +D N +VLLSN+ + + A VR K+R L K PG + IE+ H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 599 EFFVRDKSRLQVRDIYYMLDNM 620
F D+S QV++IY L+ +
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKL 692
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 291/539 (53%), Gaps = 31/539 (5%)
Query: 87 WNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLR 146
WN ++ ++ E++ ++ ML +G S D FS +LK+C+ L L G Q+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 147 KVAFGSDLFLQNCLISLYVRCGYLEFARQLFDK--MGIRDSVSYNSMIDGYVKSGNIESA 204
K ++ F+ LIS+Y +CG + AR++F++ + SV YN++I GY + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 205 RELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHG-CVKC 263
+F M +E + + + G L + ++ W LHG CVK
Sbjct: 141 AYMFRRM--KETGVSVDSVTMLGLVPLCTVPEYLW-------------LGRSLHGQCVK- 184
Query: 264 GKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYV 323
G +D A+ + + I Y K G V+ RRLFDEMP + ++ NA++ GY
Sbjct: 185 GGLDSEVAVLN-----------SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 324 RNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNG 383
+NG + LE+++ M+ + PD +LV VLS+ A LG G + + +E + F N
Sbjct: 234 QNGLAYDVLELYEQMKSS-GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 384 KHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERL 443
A I MY++CG++ A VF+ + S+ W AMI +HG+GE+ L +M +
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 444 SIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEA 503
I PD F +L+AC+H+GL +GL F M+R +KLEP +HY C+VD+LGRAG ++
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 504 ARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAG 563
A IE MP+EP+ +W LL AC+ ++N+++ E +I + +N YVL+SN+++
Sbjct: 413 AMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSD 472
Query: 564 LGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNMWT 622
R+R MM+ER +K PG S++E +G VH F D+S Q +++ MLD + T
Sbjct: 473 SKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELET 531
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 304/562 (54%), Gaps = 37/562 (6%)
Query: 52 LVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLML 111
+++ + S E AR +F + + +D F WN +I Y+ EAL++F M
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 112 DNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLE 171
+ + S S ++ + G ++ + L RK+ L L++ ++ L
Sbjct: 164 ER----NAVSWSAMITGFCQNGEVDSAVV---LFRKMPVKDSSPL-CALVAGLIKNERLS 215
Query: 172 FARQLFDKMGIRDS------VSYNSMIDGYVKSGNIESARELFDSMP----------IRE 215
A + + G S +YN++I GY + G +E+AR LFD +P RE
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 216 R---NLISWNSVLNGYAQLKSG-LQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQA 271
R N++SWNS++ Y LK G + A +F++M +RD ISWN+M+ G V +M+DA A
Sbjct: 276 RFCKNVVSWNSMIKAY--LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFA 333
Query: 272 LFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKA 331
LF +MP RD SW M+ GYA +G V++AR F++ P++ V+ N+++ Y +N +A
Sbjct: 334 LFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 332 LEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALID 391
+++F M E PD +L +LSA L ++ G+ +H+ + K H ALI
Sbjct: 394 VDLFIRMNIEGE-KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHN-ALIT 451
Query: 392 MYSKCGSIENAIKVFEQIE-DGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDI 450
MYS+CG I + ++F++++ V WNAMI G A HG A +L M+ I P I
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 451 TFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIED 510
TF +LNACAHAGLV E F M ++K+EP+++HY +V++ G E A +I
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITS 571
Query: 511 MPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDA 570
MP EP+ +W LL ACR Y N+ + A+ + ++ +S+ YVLL NM+A +G+W++A
Sbjct: 572 MPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 631
Query: 571 RRVRSMMKERNLKKLPGCSWIE 592
+VR M+ + +KK G SW++
Sbjct: 632 SQVRMNMESKRIKKERGSSWVD 653
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 213/434 (49%), Gaps = 34/434 (7%)
Query: 165 VRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSV 224
+R GY+ AR +F+K+ R++V++N+MI GYVK + AR+LFD MP +R++++WN++
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP--KRDVVTWNTM 108
Query: 225 LNGYAQLKSGLQF---AWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDV 281
++GY G++F A ++F++MP RD SWN+M+ G K ++ +A LF+KMP+R+
Sbjct: 109 ISGYVSC-GGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNA 167
Query: 282 VSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCE 341
VSW+ MI G+ + G VD A LF +MP +D A++ G ++N +A +
Sbjct: 168 VSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 342 LYLHPDDA-SLVIVLSAIAQLGHIDKGVAIHRYLE-----------KDQFSLNGKHGVAL 389
+ D + ++ Q G ++ + + +++F N ++
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 390 IDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDD 449
I Y K G + +A +F+Q++D WN MI+G E AF L EM D
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDA 343
Query: 450 ITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQ--HYGCMVDILGRAGHIEAARNL 507
++ +++ A G V EL R + PE + ++ + + A +L
Sbjct: 344 HSWNMMVSGYASVGNV-------ELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Query: 508 IEDMPME---PNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGL 564
M +E P+ +LLSA NL +G + + ++ + + L M++
Sbjct: 397 FIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRC 456
Query: 565 GMWNDARRVRSMMK 578
G ++RR+ MK
Sbjct: 457 GEIMESRRIFDEMK 470
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 203/428 (47%), Gaps = 81/428 (18%)
Query: 158 NCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNI---ESARELFDSMPIR 214
N +IS YV+ + AR+LFD M RD V++N+MI GYV G I E AR+LFD MP
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP-- 132
Query: 215 ERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFD 274
R+ SWN++++GYA+ + + A +FEKMPER+ +SW++M+ G + G++D A LF
Sbjct: 133 SRDSFSWNTMISGYAKNRR-IGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 275 KMPKRD-------------------------------------VVSWANMIDGYAKLGRV 297
KMP +D V ++ +I GY + G+V
Sbjct: 192 KMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQV 251
Query: 298 DIARRLFDEMPK---------------RDVVACNAMMGGYVRNGYSMKALEIFDNMQCEL 342
+ AR LFD++P ++VV+ N+M+ Y++ G + A +FD M+
Sbjct: 252 EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK--- 308
Query: 343 YLHPDDASLVIVLSAIAQLGHIDKGVAIHRYL-EKDQFSLNGKHGVALIDMYSKCGSIEN 401
D S ++ + ++ A+ + +D S N ++ Y+ G++E
Sbjct: 309 --DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN-----MMVSGYASVGNVEL 361
Query: 402 AIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAH 461
A FE+ + WN++I + + A DL + M +PD T T LL+A
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST- 420
Query: 462 AGLVKEGLLCFELMRRIHKLE-----PELQHYGCMVDILGRAGHIEAARNLIEDMPMEPN 516
GL+ L ++H++ P++ + ++ + R G I +R + ++M ++
Sbjct: 421 ------GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKRE 474
Query: 517 DVIWRTLL 524
+ W ++
Sbjct: 475 VITWNAMI 482
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 46/262 (17%)
Query: 254 NSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVV 313
N L+ ++ G + +A+ +F+K+ R+ V+W MI GY K ++ AR+LFD MPKRDVV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 314 ACNAMMGGYVRNG---YSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAI 370
N M+ GYV G + +A ++FD M
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMP------------------------------- 132
Query: 371 HRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLG 430
+D FS N +I Y+K I A+ +FE++ + + W+AMI G +G
Sbjct: 133 ----SRDSFSWN-----TMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEV 183
Query: 431 ELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGC 490
+ A L +M P GL+ + L + + + + E + Y
Sbjct: 184 DSAVVLFRKMPVKDSSPLCALVAGLIK---NERLSEAAWVLGQYGSLVSGREDLVYAYNT 240
Query: 491 MVDILGRAGHIEAARNLIEDMP 512
++ G+ G +EAAR L + +P
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIP 262
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 19/268 (7%)
Query: 44 KNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEA 103
++ H +V+ ++S E AR+ F K +K WN+II Y D KEA
Sbjct: 341 RDAHSWNMMVSGYAS---VGNVELARHYFEK----TPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 104 LVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISL 163
+ +F M G D + + +L A + L + G+Q+H ++ K D+ + N LI++
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITM 452
Query: 164 YVRCGYLEFARQLFDKMGI-RDSVSYNSMIDGYVKSGNIESARELFDSMPIRE--RNLIS 220
Y RCG + +R++FD+M + R+ +++N+MI GY GN A LF SM + I+
Sbjct: 453 YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHIT 512
Query: 221 WNSVLNGYAQL----KSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKM 276
+ SVLN A ++ QF + E + ++S+++ G+ ++A + M
Sbjct: 513 FVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Query: 277 P-KRDVVSWANMIDG---YAKLGRVDIA 300
P + D W ++D Y +G +A
Sbjct: 573 PFEPDKTVWGALLDACRIYNNVGLAHVA 600
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 32 QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAII 91
Q+H ++ T I + + L+ +S C + E +R IF + K++ WNA+I
Sbjct: 430 QMHQIVVKT-VIPDVPVHNALITMYSR--CGEIME-SRRIF---DEMKLKREVITWNAMI 482
Query: 92 KTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFG 151
Y+ + EAL +F M NG+ + VL AC+ GL++E K F
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA--------KAQFV 534
Query: 152 SDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSM 211
S ++S+Y +E Y+S+++ G E A + SM
Sbjct: 535 S-------MMSVYKIEPQMEH---------------YSSLVNVTSGQGQFEEAMYIITSM 572
Query: 212 PIRERNLISWNSVLNG 227
P E + W ++L+
Sbjct: 573 PF-EPDKTVWGALLDA 587
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/507 (36%), Positives = 278/507 (54%), Gaps = 47/507 (9%)
Query: 127 KACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSV 186
K L I + ++GL+ ++ +L SL V G L++A +LFD++ D
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYS---ASLSVP-GALKYAHKLFDEIPKPDVS 78
Query: 187 SYNSMIDGYVKSGNIESARELFDSMPIR----ER----------NLISWNS--------- 223
N ++ G +S E L+ M R +R + + W S
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 224 -----VLNGYAQLK--------SGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQ 270
VLN Y + L A ++F+ + ++W+SM G K GK+D+A
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 271 ALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMK 330
LFD+MP +D V+W MI G K +D AR LFD ++DVV NAM+ GYV GY +
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 331 ALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRY-LEKDQFSLNGKHGV-- 387
AL IF M+ + HPD +++ +LSA A LG ++ G +H Y LE S + G
Sbjct: 259 ALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 388 --ALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSI 445
ALIDMY+KCGSI+ AI+VF ++D + WN +I GLA+H E + ++ EM+RL +
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKV 376
Query: 446 EPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAAR 505
P+++TF G++ AC+H+G V EG F LMR ++ +EP ++HYGCMVD+LGRAG +E A
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 506 NLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLG 565
+E M +EPN ++WRTLL AC+ Y N+ +G+ + L+ M S YVLLSN++A G
Sbjct: 437 MFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTG 496
Query: 566 MWNDARRVRSMMKERNLKKLPGCSWIE 592
W+ ++VR M + +KK G S IE
Sbjct: 497 QWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 250/538 (46%), Gaps = 92/538 (17%)
Query: 20 LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFR 79
L + CK + + QIHA M+ G + N + +L+ S S S L ++A +F +
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGAL-KYAHKLFDEI---- 72
Query: 80 EKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGL 139
K D + N +++ + + P++ + ++ M GVS D+++ + VLKACS+L G
Sbjct: 73 PKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 140 QIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSG 199
HG + + F + +++N LI + CG L A +LFD V+++SM GY K G
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 200 NIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHG 259
I+ A LFD MP +++ ++WN ++ G + K + A ++F++ E+D+++WN+M+ G
Sbjct: 193 KIDEAMRLFDEMPYKDQ--VAWNVMITGCLKCKE-MDSARELFDRFTEKDVVTWNAMISG 249
Query: 260 CVKCGKMDDAQALFDKM----PKRDVVS-------------------------------- 283
V CG +A +F +M DVV+
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 284 --------WANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIF 335
W +ID YAK G +D A +F + RD+ N ++ G + ++ ++E+F
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMF 368
Query: 336 DNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSK 395
+ MQ L + P++ + + V+ A + G +D+G + FSL + DMY
Sbjct: 369 EEMQ-RLKVWPNEVTFIGVILACSHSGRVDEG--------RKYFSL-------MRDMY-- 410
Query: 396 CGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGL 455
+IE IK H+ M++ L G E AF M +E + IEP+ I + L
Sbjct: 411 --NIEPNIK-----------HYGCMVDMLGRAGQLEEAF---MFVESMKIEPNAIVWRTL 454
Query: 456 LNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGH---IEAARNLIED 510
L AC G V+ G E + + K E Y + +I G ++ R + +D
Sbjct: 455 LGACKIYGNVELGKYANEKLLSMRK--DESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 275/479 (57%), Gaps = 13/479 (2%)
Query: 135 IEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDG 194
I + IHGL F+ ++ + +++A +LF+++ + YNS+I
Sbjct: 29 INASIIIHGL------SQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRA 82
Query: 195 YVKSGNIESARELFDSMPIRERNL---ISWNSVLNGYAQLKS---GLQFAWQIFEKMPER 248
Y + ++ + + L ++ + A L S G Q + + P
Sbjct: 83 YTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRF 142
Query: 249 DLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMP 308
+++ N+++ +K + DA +FD+M +RDV+SW +++ GYA+LG++ A+ LF M
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
+ +V+ AM+ GY G ++A++ F MQ + PD+ SL+ VL + AQLG ++ G
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGK 261
Query: 369 AIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHG 428
IH Y E+ F ALI+MYSKCG I AI++F Q+E V W+ MI+G A HG
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 321
Query: 429 LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHY 488
A + EM+R ++P+ ITF GLL+AC+H G+ +EGL F++MR+ +++EP+++HY
Sbjct: 322 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY 381
Query: 489 GCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDS 548
GC++D+L RAG +E A + + MPM+P+ IW +LLS+CR NL+V HL+ ++
Sbjct: 382 GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP 441
Query: 549 SNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSR 607
+ +YVLL+N++A LG W D R+R M++ N+KK PG S IE+ +V EF D S+
Sbjct: 442 EDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSK 500
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 236/461 (51%), Gaps = 35/461 (7%)
Query: 20 LLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFR 79
L++ K+ N+ +I+A +I G +++ + TK+V C + + + F
Sbjct: 16 FLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMV-----DFCDKIEDMD----YATRLFN 66
Query: 80 EKKDP--FLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSV-DKFSASLVLKACSRLGLIE 136
+ +P FL+N+II+ Y+H + + ++ +L + D+F+ + K+C+ LG
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 137 EGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV 196
G Q+HG L K + +N LI +Y++ L A ++FD+M RD +S+NS++ GY
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 197 KSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMP----ERDLIS 252
+ G ++ A+ LF M ++ ++SW ++++GY + ++ A F +M E D IS
Sbjct: 187 RLGQMKKAKGLFHLM--LDKTIVSWTAMISGYTGIGCYVE-AMDFFREMQLAGIEPDEIS 243
Query: 253 WNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWAN----MIDGYAKLGRVDIARRLFDEMP 308
S+L C + G ++ + + +R + +I+ Y+K G + A +LF +M
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 309 KRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGV 368
+DV++ + M+ GY +G + A+E F+ MQ + P+ + + +LSA + +G +G+
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 369 AIHRYLEKD-QFSLNGKHGVALIDMYSKCGSIENAIKVFEQI---EDGSVDHWNAMINGL 424
+ +D Q +H LID+ ++ G +E A+++ + + D + W ++++
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI--WGSLLSSC 420
Query: 425 AIHGLGELAFDLLMEMERL-SIEPDDI-TFTGLLNACAHAG 463
G ++A L+ M+ L +EP+D+ + L N A G
Sbjct: 421 RTPGNLDVA---LVAMDHLVELEPEDMGNYVLLANIYADLG 458
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 239/380 (62%), Gaps = 6/380 (1%)
Query: 247 ERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDE 306
++D S+L+ CG + AQ +FD +D+ +W ++++ YAK G +D AR+LFDE
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 307 MPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQC----ELYLHPDDASLVIVLSAIAQLG 362
MP+R+V++ + ++ GYV G +AL++F MQ E ++ P++ ++ VLSA +LG
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 363 HIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQI-EDGSVDHWNAMI 421
+++G +H Y++K ++ G ALIDMY+KCGS+E A +VF + V ++AMI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 422 NGLAIHGLGELAFDLLMEMERL-SIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHK 480
LA++GL + F L EM +I P+ +TF G+L AC H GL+ EG F++M
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 481 LEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVA 540
+ P +QHYGCMVD+ GR+G I+ A + I MPMEP+ +IW +LLS R ++ E
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 541 KHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEF 600
K LI +D NS +YVLLSN++A G W + + +R M+ + + K+PGCS++E+EGVVHEF
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 601 FVRDKSRLQVRDIYYMLDNM 620
V D+S+ + IY MLD +
Sbjct: 454 VVGDESQQESERIYAMLDEI 473
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 185/367 (50%), Gaps = 20/367 (5%)
Query: 75 YHAFREKKDPFLWNAIIKTYSHGLDPKE---ALVMFCLMLDNGVSVDKFSASLVLKACSR 131
+H K + FLWN II+ H + + + ++ M ++ VS D + +L +
Sbjct: 15 FHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHN 74
Query: 132 LGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSM 191
+ G + H + D F++ L+++Y CG L A+++FD G +D ++NS+
Sbjct: 75 PLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSV 134
Query: 192 IDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGY---AQLKSGLQFAWQIFEKMPER 248
++ Y K+G I+ AR+LFD MP ERN+ISW+ ++NGY + K L ++ P
Sbjct: 135 VNAYAKAGLIDDARKLFDEMP--ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 192
Query: 249 DLISWN-----SMLHGCVKCGKMDDAQ---ALFDKM-PKRDVVSWANMIDGYAKLGRVDI 299
+ N ++L C + G ++ + A DK + D+V +ID YAK G ++
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 300 ARRLFDEM-PKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAI 358
A+R+F+ + K+DV A +AM+ G + + ++F M ++P+ + V +L A
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 359 AQLGHIDKGVAIHRYL-EKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIE-DGSVDH 416
G I++G + + + E+ + + +H ++D+Y + G I+ A + + V
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 417 WNAMING 423
W ++++G
Sbjct: 373 WGSLLSG 379
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 312/584 (53%), Gaps = 47/584 (8%)
Query: 81 KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQ 140
++D W +I Y + +A+ + M+ G+ +F+ + VL + + +E G +
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 167
Query: 141 IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN 200
+H + K+ ++ + N L+++Y +CG A+ +FD+M +RD S+N+MI +++ G
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 201 IESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWN-----S 255
++ A F+ M ER++++WNS+++G+ Q L+ A IF KM L+S + S
Sbjct: 228 MDLAMAQFEQMA--ERDIVTWNSMISGFNQRGYDLR-ALDIFSKMLRDSLLSPDRFTLAS 284
Query: 256 MLHGCV-----------------------------------KCGKMDDAQALFDKMPKRD 280
+L C +CG ++ A+ L ++ +D
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 281 --VVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNM 338
+ + ++DGY KLG ++ A+ +F + RDVVA AM+ GY ++G +A+ +F +M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 339 QCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGS 398
P+ +L +LS + L + G IH K + ALI MY+K G+
Sbjct: 405 -VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 399 IENAIKVFEQIE-DGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLN 457
I +A + F+ I + W +MI LA HG E A +L M + PD IT+ G+ +
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Query: 458 ACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPND 517
AC HAGLV +G F++M+ + K+ P L HY CMVD+ GRAG ++ A+ IE MP+EP+
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 518 VIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMM 577
V W +LLSACR ++N+++G+ A+ L+ ++ NS +Y L+N+++ G W +A ++R M
Sbjct: 584 VTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Query: 578 KERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNMW 621
K+ +KK G SWIE++ VH F V D + + +IY + +W
Sbjct: 644 KDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIW 687
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 233/542 (42%), Gaps = 117/542 (21%)
Query: 141 IHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGN 200
+H + K ++L N L+++Y + GY AR+LFD+M +R + S+N+++ Y K G+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 201 IESARELFDSMPIRERNLISWNSVLNGYAQL--------------KSGL---QFAW---- 239
++S E FD +P +R+ +SW +++ GY + K G+ QF
Sbjct: 96 MDSTCEFFDQLP--QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 240 ----------------QIFEKMPERDLISW-NSMLHGCVKCGKMDDAQALFDKMPKRDVV 282
K+ R +S NS+L+ KCG A+ +FD+M RD+
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 283 SWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCEL 342
SW MI + ++G++D+A F++M +RD+V N+M+ G+ + GY ++AL+IF M +
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 343 YLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENA 402
L PD +L VLSA A L + G IH ++ F ++G ALI MYS+CG +E A
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 403 IKVFEQ---------------------------------IEDGSVDHWNAMINGLAIHGL 429
++ EQ ++D V W AMI G HG
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 430 GELAFDLLMEMERLSIEPDDITFT-----------------------------------G 454
A +L M P+ T
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA 453
Query: 455 LLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPME 514
L+ A AG + F+L+R E + + M+ L + GH E A L E M ME
Sbjct: 454 LITMYAKAGNITSASRAFDLIR----CERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 515 ---PNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDS--SNSSSYVLLSNMFAGLGMWND 569
P+ + + + SAC + +N G + +D S Y + ++F G+ +
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 570 AR 571
A+
Sbjct: 570 AQ 571
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 31 NQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYHAFREKKDPFLWNAI 90
QIH + +G I + ++ L+ ++ + +T +R + R ++D W ++
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAG--NITSASR----AFDLIRCERDTVSWTSM 486
Query: 91 IKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKV-A 149
I + +EAL +F ML G+ D + V AC+ GL+ +G Q +++ V
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDK 546
Query: 150 FGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIR-DSVSYNSMIDGYVKSGNIESARELF 208
L C++ L+ R G L+ A++ +KM I D V++ S++ NI+ +
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAA 606
Query: 209 DSMPIRE-RNLISWNSVLNGYA 229
+ + + E N +++++ N Y+
Sbjct: 607 ERLLLLEPENSGAYSALANLYS 628
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 299 bits (766), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 195/666 (29%), Positives = 331/666 (49%), Gaps = 85/666 (12%)
Query: 32 QIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEF--ARYIFFKYHAFREKKDPFLWNA 89
Q+H + I GF+ + + T LV ++ + F R +F + ++++ W
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKG-----SNFKDGRKVFDEM----KERNVVTWTT 164
Query: 90 IIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVA 149
+I Y+ E L +F M + G + F+ + L + G+ GLQ+H ++ K
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 150 FGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFD 209
+ + N LI+LY++CG + AR LFDK ++ V++NSMI GY +G A +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 210 SMPIRERNLI--SWNSVLNGYAQLKS--------------GLQF---------------- 237
SM + L S+ SV+ A LK G F
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 238 ----AWQIFEKMP-ERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDV----------- 281
A ++F+++ +++SW +M+ G ++ ++A LF +M ++ V
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 282 ------------------------VSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNA 317
++D Y KLG+V+ A ++F + +D+VA +A
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 318 MMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQL-GHIDKGVAIHRYLEK 376
M+ GY + G + A+++F + + + P++ + +L+ A + +G H + K
Sbjct: 465 MLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 377 DQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDL 436
+ + AL+ MY+K G+IE+A +VF++ + + WN+MI+G A HG A D+
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 437 LMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILG 496
EM++ ++ D +TF G+ AC HAGLV+EG F++M R K+ P +H CMVD+
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 497 RAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVL 556
RAG +E A +IE+MP IWRT+L+ACR ++ +G A+ +I M +S++YVL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 557 LSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYM 616
LSNM+A G W + +VR +M ERN+KK PG SWIE++ + F D+S IY
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 617 LDNMWT 622
L+++ T
Sbjct: 764 LEDLST 769
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 226/501 (45%), Gaps = 67/501 (13%)
Query: 1 MFVSANYNQPCNSTQSTLLLLRKCKTLNDV---NQIHARMITTGFIKNTHLTTKLVASFS 57
MF S N S S +++ C L ++ Q+H ++ GF+ + ++ T L+ ++S
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 58 SSPCTPLTEFARYIFFKYHAFRE---KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNG 114
CT + + R F+E + W A+I + +EA+ +F M G
Sbjct: 342 K--CTAMLDALRL-------FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 115 VSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFAR 174
V ++F+ S++L A L +I ++H + K + + L+ YV+ G +E A
Sbjct: 393 VRPNEFTYSVILTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 175 QLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIR--ERNLISWNSVLN----GY 228
++F + +D V++++M+ GY ++G E+A ++F + + N +++S+LN
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 229 AQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMI 288
A + G QF + + L +++L K G ++ A+ +F + ++D+VSW +MI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 289 DGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDD 348
GYA+ G+ A +F EM KR V D
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKV--------------------------------KMDG 596
Query: 349 ASLVIVLSAIAQLGHIDKGVAIHRYLEKD-QFSLNGKHGVALIDMYSKCGSIENAIKVFE 407
+ + V +A G +++G + +D + + +H ++D+YS+ G +E A+KV E
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 408 QIEDGSVDH-WNAMINGLAIHG---LGELAFDLLMEMERLSIEPDDITFTGLLNACAHAG 463
+ + + W ++ +H LG LA + ++ M+ D + L N A +G
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK----PEDSAAYVLLSNMYAESG 712
Query: 464 LVKEGLLCFELM-RRIHKLEP 483
+E +LM R K EP
Sbjct: 713 DWQERAKVRKLMNERNVKKEP 733
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 231/527 (43%), Gaps = 71/527 (13%)
Query: 94 YSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSD 153
+S +EA +F + G+ +D S VLK + L G Q+H K F D
Sbjct: 68 FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127
Query: 154 LFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPI 213
+ + L+ Y++ + R++FD+M R+ V++ ++I GY ++ + LF M
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 214 R--ERNLISWNSVLNGYAQLK---SGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDD 268
+ N ++ + L A+ GLQ + + ++ + NS+++ +KCG +
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 269 AQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYS 328
A+ LFDK + VV+W +MI GYA NG
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAA-------------------------------NGLD 276
Query: 329 MKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVA 388
++AL +F +M+ Y+ ++S V+ A L + +H + K F + A
Sbjct: 277 LEALGMFYSMRLN-YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 389 LIDMYSKCGSIENAIKVFEQIE-DGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEP 447
L+ YSKC ++ +A+++F++I G+V W AMI+G + E A DL EM+R + P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 448 DDITFTGLLNAC-------AHAGLVKE--------GLLCFELMRRIHKLE---------- 482
++ T++ +L A HA +VK G + ++ K+E
Sbjct: 396 NEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 483 -PELQHYGCMVDILGRAGHIEAARNLIEDMP---MEPNDVIWRTLLSACRNYENLNVGEP 538
++ + M+ + G EAA + ++ ++PN+ + ++L+ C N ++G+
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMGQG 514
Query: 539 VAKHLIGMDSSNSSSYVLLS---NMFAGLGMWNDARRVRSMMKERNL 582
H + S SS + S M+A G A V +E++L
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 190/445 (42%), Gaps = 77/445 (17%)
Query: 194 GYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQ--------------LKSGLQFAW 239
G V S + +A LFD P R+R S+ S+L G+++ + G++
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRE--SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC 93
Query: 240 QIFEKMPERDLISWNSM----LH-GCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKL 294
IF + + + + LH C+K G +D DV +++D Y K
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD------------DVSVGTSLVDTYMKG 141
Query: 295 GRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIV 354
R++FDEM +R+VV ++ GY RN + + L +F MQ E P+ +
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE-GTQPNSFTFAAA 200
Query: 355 LSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSV 414
L +A+ G +G+ +H + K+ +LI++Y KCG++ A +F++ E SV
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 415 DHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACA-----------HAG 463
WN+MI+G A +GL A + M + + +F ++ CA H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 464 LVKEGLLCFE-----LMRRIHKLEPEL------QHYGCMVDILGRAGHI---------EA 503
+VK G L + LM K L + GC+ +++ I E
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 504 ARNLIEDMP---MEPNDVIWRTLLSACRNYENLNVGEPVAKH--LIGMDSSNSSSY-VLL 557
A +L +M + PN+ + +L+A L V P H ++ + SS+ L
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTA------LPVISPSEVHAQVVKTNYERSSTVGTAL 434
Query: 558 SNMFAGLGMWNDARRVRSMMKERNL 582
+ + LG +A +V S + ++++
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDKDI 459
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 202/680 (29%), Positives = 332/680 (48%), Gaps = 87/680 (12%)
Query: 20 LLRKCKTLNDV---NQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFKYH 76
LL+ C L D+ +++H+ ++ G+ + LV+ ++ + AR +F
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA---ARRLF---D 241
Query: 77 AFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASLVLKACSRLGLIE 136
F+EK D LWN+I+ +YS E L +F M G + + ++ L AC +
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 137 EGLQIHG-LLRKVAFGSDLFLQNCLISLYVRCG--------------------------- 168
G +IH +L+ S+L++ N LI++Y RCG
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 169 --------YLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIR--ERNL 218
LEF + D VS S+I + N+ + EL + + NL
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 219 ISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPK 278
N++++ Y++ + + F +M ++DLISW +++ G + +A LF + K
Sbjct: 422 QVGNTLIDMYSKCNLTC-YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 279 R--------------------------------------DVVSWANMIDGYAKLGRVDIA 300
+ D V ++D Y K + A
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYA 540
Query: 301 RRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQ 360
R+F+ + +DVV+ +M+ NG +A+E+F M E L D +L+ +LSA A
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVALLCILSAAAS 599
Query: 361 LGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAM 420
L ++KG IH YL + F L G VA++DMY+ CG +++A VF++IE + + +M
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 421 INGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHK 480
IN +HG G+ A +L +M ++ PD I+F LL AC+HAGL+ EG ++M ++
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 481 LEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVA 540
LEP +HY C+VD+LGRA + A ++ M EP +W LL+ACR++ +GE A
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 779
Query: 541 KHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEF 600
+ L+ ++ N + VL+SN+FA G WND +VR+ MK ++K PGCSWIE++G VH+F
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839
Query: 601 FVRDKSRLQVRDIYYMLDNM 620
RDKS + ++IY L +
Sbjct: 840 TARDKSHPESKEIYEKLSEV 859
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 246/538 (45%), Gaps = 63/538 (11%)
Query: 3 VSANYNQPCNSTQSTLLLLRKCKTLNDVNQIHARMITT-GFIKNTHLTTKLVASFSSSPC 61
VS N N P + L L K + ++ Q+H+R+ T + L KLV F C
Sbjct: 73 VSEN-NSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV--FMYGKC 129
Query: 62 TPLTEFARYIFFKYHAFREKKD--PFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDK 119
L + + F E D F WN +I Y +P AL ++ M GV +
Sbjct: 130 GSLDDAEK-------VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGL 182
Query: 120 FSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDK 179
S +LKAC++L I G ++H LL K+ + S F+ N L+S+Y + L AR+LFD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 180 MGIR-DSVSYNSMIDGYVKSGNIESARELFDSMPI-----RERNLISWNSVLNGYAQLKS 233
+ D+V +NS++ Y SG ELF M + ++S + +G++ K
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 234 GLQFAWQIFEKMP-ERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYA 292
G + + + +L N+++ +CGKM A+ + +M DVV+W
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW-------- 354
Query: 293 KLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLV 352
N+++ GYV+N +ALE F +M + D+ S+
Sbjct: 355 -----------------------NSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMT 390
Query: 353 IVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDG 412
+++A +L ++ G+ +H Y+ K + N + G LIDMYSKC + F ++ D
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 413 SVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCF 472
+ W +I G A + A +L ++ + +E D++ +L A + ++K L+
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA---SSVLKSMLIVK 507
Query: 473 ELMRRIHK---LEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVI-WRTLLSA 526
E+ I + L+ +Q+ +VD+ G+ ++ A + E ++ DV+ W +++S+
Sbjct: 508 EIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFES--IKGKDVVSWTSMISS 561
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 263/460 (57%), Gaps = 12/460 (2%)
Query: 169 YLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLN-- 226
YL++A Q+ D+ + NSMI + KS E + + + + +L N +N
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 227 -----GYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDV 281
G ++GLQ + + D ++ + G +D +F+ +P D
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 282 VSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCE 341
V M+ A+ G V AR+LF+ MP+RD +A NAM+ GY + G S +AL +F MQ E
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 342 LYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIEN 401
+ + +++ VLSA QLG +D+G H Y+E+++ + + L+D+Y+KCG +E
Sbjct: 235 -GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 402 AIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAH 461
A++VF +E+ +V W++ +NGLA++G GE +L M++ + P+ +TF +L C+
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 462 AGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWR 521
G V EG F+ MR +EP+L+HYGC+VD+ RAG +E A ++I+ MPM+P+ +W
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 522 TLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERN 581
+LL A R Y+NL +G +K ++ ++++N +YVLLSN++A W++ VR MK +
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 582 LKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLDNMW 621
++K PGCS +E+ G VHEFFV DKS + Y +D +W
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPK----YTQIDAVW 509
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 232/445 (52%), Gaps = 30/445 (6%)
Query: 15 QSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSPCTPLTEFARYIFFK 74
+ LL T +V QIHA++ G +K+ HL V + + S L ++A I +
Sbjct: 7 HPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYL-DYANQILDR 65
Query: 75 YHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNG--VSVDKFSASLVLKACSRL 132
EK F N++I+ + P+++ + +L +G + D ++ + +++AC+ L
Sbjct: 66 ----SEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 133 GLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMI 192
+ E GLQ+HG+ + F +D +Q LISLY G L+ ++F+ + D V +M+
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 193 DGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDL-- 250
+ G++ AR+LF+ MP ER+ I+WN++++GYAQ+ + A +F M +
Sbjct: 182 TACARCGDVVFARKLFEGMP--ERDPIAWNAMISGYAQVGESRE-ALNVFHLMQLEGVKV 238
Query: 251 --ISWNSMLHGCVKCGKMDD---AQALFDKMPKRDVVSWA-NMIDGYAKLGRVDIARRLF 304
++ S+L C + G +D A + ++ + V A ++D YAK G ++ A +F
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 305 DEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHI 364
M +++V ++ + G NG+ K LE+F M+ + + P+ + V VL + +G +
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 365 DKGVAIHRYLE--KDQFSLNGK--HGVALIDMYSKCGSIENAIKVFEQIE-DGSVDHWNA 419
D+G R+ + +++F + + H L+D+Y++ G +E+A+ + +Q+ W++
Sbjct: 358 DEG---QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 420 MINGLAIHG---LGELAFDLLMEME 441
+++ ++ LG LA ++E+E
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELE 439
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 291/568 (51%), Gaps = 56/568 (9%)
Query: 65 TEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVDKFSASL 124
T F RY+ +K D F WN++I + D EAL+ F M + + S
Sbjct: 30 TLFNRYV--------DKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPC 81
Query: 125 VLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRD 184
+KACS L I G Q H + SD+F+ + LI +Y CG LE
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE------------- 128
Query: 185 SVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQ----FAWQ 240
AR++FD +P +RN++SW S++ GY + L F
Sbjct: 129 ------------------DARKVFDEIP--KRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 241 IFEKMPERDLISWNSM-----LHGCVKCGKMDDAQALFDKMPKRDV---VSWAN-MIDGY 291
+ ++ + D + +SM + C + +++ + KR VS N ++D Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 292 AKLGR--VDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDA 349
AK G V +AR++FD++ +D V+ N++M Y ++G S +A E+F + + +
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 350 SLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQI 409
+L VL A++ G + G IH + + + G ++IDMY KCG +E A K F+++
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 410 EDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGL 469
++ +V W AMI G +HG A +L M + P+ ITF +L AC+HAGL EG
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 470 LCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPNDVIWRTLLSACRN 529
F M+ +EP L+HYGCMVD+LGRAG ++ A +LI+ M M+P+ +IW +LL+ACR
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRI 468
Query: 530 YENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMMKERNLKKLPGCS 589
++N+ + E L +DSSN Y+LLS+++A G W D RVR +MK R L K PG S
Sbjct: 469 HKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS 528
Query: 590 WIELEGVVHEFFVRDKSRLQVRDIYYML 617
+EL G VH F + D+ Q IY L
Sbjct: 529 LLELNGEVHVFLIGDEEHPQREKIYEFL 556
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,537,618
Number of Sequences: 539616
Number of extensions: 9810048
Number of successful extensions: 38354
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 27417
Number of HSP's gapped (non-prelim): 2093
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)