BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047125
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Query: 102 LEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTS 161
L V VG E K PVS+L+QP FQ+LLS+AEEEFGY++PMGGLTIP ED+F +TS
Sbjct: 22 LAVYVG--EKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITS 79
Query: 162 GLN 164
LN
Sbjct: 80 CLN 82
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Query: 102 LEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTS 161
L V VG EN K PVS L+QP FQ+LLS+AEEEFGY++PMGGLTIP ED+F ++TS
Sbjct: 30 LAVYVG--ENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITS 87
Query: 162 GLNG 165
L+
Sbjct: 88 CLSA 91
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 44/49 (89%)
Query: 116 STPVSFLSQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTSGLN 164
+ PVS+L++P FQELLS+AEEEFGY++PMGGLTIP +E+ F+N+T+ LN
Sbjct: 43 TIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 118 PVSFLSQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTSGLN 164
PVS+L+QP FQ+LL++AEEEFGY++PMGGLTIP +ED F+ +TS LN
Sbjct: 44 PVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 102 LEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTS 161
L V VG E K PVS+++QP FQ+LL++AEEEFGY++PMGGLTIP E++F +T
Sbjct: 22 LAVYVG--EKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITC 79
Query: 162 GLN 164
LN
Sbjct: 80 CLN 82
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Query: 102 LEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTS 161
L V VG E + PVS+L++P FQ+LLS+AEEEFGY++P GGLTIP ED+F ++TS
Sbjct: 30 LAVYVG--EKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITS 87
Query: 162 GLN 164
LN
Sbjct: 88 FLN 90
>sp|Q1GZF5|MNMA_METFK tRNA-specific 2-thiouridylase MnmA OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=mnmA PE=3 SV=1
Length = 360
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 71 YEQDYSARSRMYPPRGHSRSRPPTRSIRSFLLEVEVGRPENQKLASTPVSFLSQPPFQEL 130
Y + + S+ P GH R IR + G P ++K ST + F+ + PFQE
Sbjct: 152 YRLNQAQLSKTLFPLGHLLKR----EIRD--IARRAGLPTSEKKDSTGICFIGERPFQEF 205
Query: 131 LSK 133
LS+
Sbjct: 206 LSR 208
>sp|C0NF00|MDM12_AJECG Mitochondrial distribution and morphology protein 12 OS=Ajellomyces
capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC
2432) GN=MDM12 PE=3 SV=1
Length = 430
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 87 HSRSRPPTRSIRSFLLEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEEFGY 140
+S R P+ +R +E E+GR EN K A V L + +++ EEEF Y
Sbjct: 369 NSSRRKPSSLLREIRVESEIGRKENGKQALKNVGKLEKFVLEQVRRIFEEEFVY 422
>sp|A6NDI0|TR49B_HUMAN Putative tripartite motif-containing protein 49B OS=Homo sapiens
GN=TRIM49B PE=2 SV=1
Length = 452
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 21 YCWSTTLPNTRNWGTGVWGIYFDKASHDEQVSGSRIPRIGIFYRSLVAGEYEQDYSARSR 80
Y W + ++ NW GV +Y+ + + +E++ G G+F V + ++ S
Sbjct: 341 YYWEVHVGDSWNWAFGVCNMYWKEKNQNEKIDGED----GLFLLGCVKNDIQRSLFTTSP 396
Query: 81 M---YPPRGHSR 89
+ Y PR SR
Sbjct: 397 LLLQYIPRPTSR 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,383,698
Number of Sequences: 539616
Number of extensions: 2854402
Number of successful extensions: 5292
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5283
Number of HSP's gapped (non-prelim): 13
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)