Query 047125
Match_columns 166
No_of_seqs 117 out of 597
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 13:37:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047125.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047125hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y6ia2 a.261.1.1 (A:83-233) M 31.0 1.4 0.0001 32.8 -3.1 30 96-129 119-148 (151)
2 d1tjya_ c.93.1.1 (A:) AI-2 rec 30.0 27 0.002 24.3 4.0 29 113-141 4-35 (316)
3 d1unda_ a.14.1.1 (A:) Advillin 30.0 6.2 0.00045 22.9 0.4 18 121-138 1-18 (36)
4 d1t2da2 d.162.1.1 (A:151-315) 20.3 51 0.0037 22.5 3.9 32 102-137 126-157 (165)
5 d3buxb3 d.93.1.1 (B:264-351) C 17.6 43 0.0031 22.7 2.8 36 99-138 37-73 (88)
6 d1b0aa2 c.58.1.2 (A:2-122) Tet 16.1 1.1E+02 0.0078 20.4 4.7 55 97-165 31-87 (121)
7 d1nn7a_ d.42.1.2 (A:) Potassiu 16.0 11 0.00079 25.2 -0.7 57 102-164 2-59 (105)
8 d1yp2a2 c.68.1.6 (A:10-316) Gl 15.8 70 0.0051 22.7 3.9 47 89-136 24-82 (307)
9 d1y74b1 a.194.1.1 (B:83-132) P 15.5 25 0.0018 21.7 1.0 19 121-139 27-49 (50)
10 d1yu5x1 a.14.1.1 (X:10-76) Vil 15.4 17 0.0013 23.4 0.2 19 120-138 31-49 (67)
No 1
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=30.98 E-value=1.4 Score=32.75 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=19.1
Q ss_pred CCCCceEEEEEcCCCCceEEEEeccCCCCHHHHH
Q 047125 96 SIRSFLLEVEVGRPENQKLASTPVSFLSQPPFQE 129 (166)
Q Consensus 96 ~VPKG~faVYVG~e~e~rRFVVPv~yLnHPlFqe 129 (166)
..|+||+|+.- .-++ .| +--..|+||.|.+
T Consensus 119 ~AP~GHLP~~~-~lrG-~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 119 SAPQGHLPLLN-QLRG-VR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TSCTTCCSCCC-CTTC-TH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCccc-hhhh-HH--HHHHHHcCcchhh
Confidence 68999999853 3322 11 2234689998864
No 2
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=30.03 E-value=27 Score=24.29 Aligned_cols=29 Identities=10% Similarity=0.035 Sum_probs=24.1
Q ss_pred eEEEEeccCCCCHHHHHHH---HhHHHhcCCc
Q 047125 113 KLASTPVSFLSQPPFQELL---SKAEEEFGYN 141 (166)
Q Consensus 113 rRFVVPv~yLnHPlFqeLL---eqAEEEfGf~ 141 (166)
+|..+=+..+++|.|+.+. +++.+++|++
T Consensus 4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 6777778899999999997 5667788986
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.97 E-value=6.2 Score=22.93 Aligned_cols=18 Identities=22% Similarity=0.534 Sum_probs=16.2
Q ss_pred CCCCHHHHHHHHhHHHhc
Q 047125 121 FLSQPPFQELLSKAEEEF 138 (166)
Q Consensus 121 yLnHPlFqeLLeqAEEEf 138 (166)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 788899999999999887
No 4
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=20.27 E-value=51 Score=22.46 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=23.4
Q ss_pred EEEEEcCCCCceEEEEeccCCCCHHHHHHHHhHHHh
Q 047125 102 LEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEE 137 (166)
Q Consensus 102 faVYVG~e~e~rRFVVPv~yLnHPlFqeLLeqAEEE 137 (166)
+||-+|++. -.-++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~~G--v~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGANG--VEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEETTE--EEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcCCc--eEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 467778776 55677776 66 6678888888876
No 5
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.57 E-value=43 Score=22.69 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=26.2
Q ss_pred CceEEE-EEcCCCCceEEEEeccCCCCHHHHHHHHhHHHhc
Q 047125 99 SFLLEV-EVGRPENQKLASTPVSFLSQPPFQELLSKAEEEF 138 (166)
Q Consensus 99 KG~faV-YVG~e~e~rRFVVPv~yLnHPlFqeLLeqAEEEf 138 (166)
-|.-|+ ||-.+. =++-+.=.|.|++|+|++-++|-|
T Consensus 37 lGQWAIGyvt~dg----~IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 37 LGQWAIGYVTADG----NILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp TTSEEEEEECTTS----CEEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccceeeeeeccCC----ceeeeccCccHHHHHHHhccccee
Confidence 344444 665554 255667789999999999999876
No 6
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=16.06 E-value=1.1e+02 Score=20.42 Aligned_cols=55 Identities=24% Similarity=0.231 Sum_probs=39.9
Q ss_pred CCCceEEEEEcCCCCceEEEEeccCCCCHHHHHHHHhHHHhcCCcCCCCceEe--eccHHHHHHHHHhhcC
Q 047125 97 IRSFLLEVEVGRPENQKLASTPVSFLSQPPFQELLSKAEEEFGYNNPMGGLTI--PYREDIFINLTSGLNG 165 (166)
Q Consensus 97 VPKG~faVYVG~e~e~rRFVVPv~yLnHPlFqeLLeqAEEEfGf~~~~G~LtI--PCdv~~FE~VL~~I~~ 165 (166)
.+.+...|+||+.. ..-.....-.++.++.|+... .+.+ .|..+.+..++..+++
T Consensus 31 ~~P~LavI~vg~d~------------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~lN~ 87 (121)
T d1b0aa2 31 RAPGLAVVLVGSNP------------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLNA 87 (121)
T ss_dssp CCCEEEEEEESCCH------------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeCCCh------------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHHHhC
Confidence 35588899999874 122455677888999999876 5666 4667888888887764
No 7
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=16.03 E-value=11 Score=25.24 Aligned_cols=57 Identities=21% Similarity=0.200 Sum_probs=36.9
Q ss_pred EEEEEcCCCCceEEEEeccCC-CCHHHHHHHHhHHHhcCCcCCCCceEeeccHHHHHHHHHhhc
Q 047125 102 LEVEVGRPENQKLASTPVSFL-SQPPFQELLSKAEEEFGYNNPMGGLTIPYREDIFINLTSGLN 164 (166)
Q Consensus 102 faVYVG~e~e~rRFVVPv~yL-nHPlFqeLLeqAEEEfGf~~~~G~LtIPCdv~~FE~VL~~I~ 164 (166)
+.+-||. ++|.+..+-| ++|.. +|.+.....-++.+.|.+-|--+...|++||..+.
T Consensus 2 I~LNVGG----~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR 59 (105)
T d1nn7a_ 2 IVLNVSG----TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYR 59 (105)
T ss_dssp EEEEETT----EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEECC----EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 4556776 6898888766 45531 12222223333433389999999999999998764
No 8
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=15.78 E-value=70 Score=22.70 Aligned_cols=47 Identities=15% Similarity=-0.008 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCceEEEEEcCC------------CCceEEEEeccCCCCHHHHHHHHhHHH
Q 047125 89 RSRPPTRSIRSFLLEVEVGRP------------ENQKLASTPVSFLSQPPFQELLSKAEE 136 (166)
Q Consensus 89 ~~~~~~~~VPKG~faVYVG~e------------~e~rRFVVPv~yLnHPlFqeLLeqAEE 136 (166)
|.+|.+..+||..+|| .|+. .+-++++|=+.|.+...++.|.+....
T Consensus 24 RL~plT~~~PK~llpv-~g~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~ 82 (307)
T d1yp2a2 24 RLYPLTKKRAKPAVPL-GANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYAS 82 (307)
T ss_dssp CCTTTTTTSCGGGCEE-TTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC-
T ss_pred cCChhhcCCCcceEEE-CCCCCHHHHHHHHHHHcCCCEEEEEeccccccchhhhhccccc
Confidence 5555666789999998 2332 123889999999999999888765443
No 9
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.49 E-value=25 Score=21.67 Aligned_cols=19 Identities=42% Similarity=0.670 Sum_probs=14.4
Q ss_pred CCCCHHHHHHHH----hHHHhcC
Q 047125 121 FLSQPPFQELLS----KAEEEFG 139 (166)
Q Consensus 121 yLnHPlFqeLLe----qAEEEfG 139 (166)
.|+.|-|+.||. -|.+.||
T Consensus 27 lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 27 ILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCHHHHHHHHHHHHHHHHhcc
Confidence 578899999996 4566665
No 10
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=15.41 E-value=17 Score=23.45 Aligned_cols=19 Identities=21% Similarity=0.460 Sum_probs=17.8
Q ss_pred cCCCCHHHHHHHHhHHHhc
Q 047125 120 SFLSQPPFQELLSKAEEEF 138 (166)
Q Consensus 120 ~yLnHPlFqeLLeqAEEEf 138 (166)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6899999999999999997
Done!