Query 047129
Match_columns 126
No_of_seqs 103 out of 1086
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 07:55:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047129.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047129hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 2.6E-31 5.6E-36 213.9 10.6 123 1-126 27-176 (447)
2 PLN00140 alcohol acetyltransfe 100.0 1.5E-30 3.3E-35 209.5 10.7 121 4-126 31-178 (444)
3 PLN02663 hydroxycinnamoyl-CoA: 100.0 9.3E-30 2E-34 203.9 10.8 122 3-126 28-175 (431)
4 PF02458 Transferase: Transfer 100.0 4.6E-30 9.9E-35 204.2 7.2 124 2-126 28-177 (432)
5 PLN02481 Omega-hydroxypalmitat 100.0 2.3E-28 5E-33 196.4 10.3 124 1-126 38-188 (436)
6 PF00668 Condensation: Condens 96.4 0.0088 1.9E-07 44.3 5.4 45 81-125 112-158 (301)
7 PF03007 WES_acyltransf: Wax e 94.7 0.051 1.1E-06 41.2 4.2 115 7-121 16-154 (263)
8 PRK09294 acyltransferase PapA5 94.6 0.063 1.4E-06 42.9 4.8 41 84-124 98-139 (416)
9 COG4908 Uncharacterized protei 94.6 0.061 1.3E-06 43.6 4.5 55 67-123 98-153 (439)
10 TIGR02946 acyl_WS_DGAT acyltra 92.4 0.17 3.8E-06 40.6 3.8 39 83-121 107-148 (446)
11 PF00198 2-oxoacid_dh: 2-oxoac 89.3 0.49 1.1E-05 35.4 3.5 29 95-123 195-223 (231)
12 PRK10252 entF enterobactin syn 89.3 0.56 1.2E-05 42.4 4.4 42 83-124 118-161 (1296)
13 PRK11856 branched-chain alpha- 88.6 0.46 9.9E-06 38.4 3.1 28 96-123 375-402 (411)
14 PF07247 AATase: Alcohol acety 88.5 1.5 3.3E-05 35.6 6.1 40 83-122 124-167 (480)
15 PRK11857 dihydrolipoamide acet 88.2 0.51 1.1E-05 36.9 3.0 28 96-123 270-297 (306)
16 PF00302 CAT: Chloramphenicol 88.1 1.1 2.4E-05 33.1 4.6 38 82-119 164-205 (206)
17 TIGR01349 PDHac_trf_mito pyruv 88.0 0.52 1.1E-05 38.6 3.0 28 96-123 400-427 (435)
18 PLN02528 2-oxoisovalerate dehy 87.8 0.58 1.2E-05 38.1 3.2 28 96-123 378-405 (416)
19 PTZ00144 dihydrolipoamide succ 86.8 0.72 1.6E-05 37.7 3.2 27 96-122 381-407 (418)
20 PRK14843 dihydrolipoamide acet 86.3 0.75 1.6E-05 36.6 3.0 27 97-123 313-339 (347)
21 PRK11855 dihydrolipoamide acet 86.0 0.78 1.7E-05 38.5 3.1 28 96-123 512-539 (547)
22 PRK05704 dihydrolipoamide succ 85.9 0.83 1.8E-05 37.1 3.1 27 97-123 371-397 (407)
23 TIGR01347 sucB 2-oxoglutarate 85.8 0.89 1.9E-05 36.9 3.3 27 97-123 367-393 (403)
24 PRK13757 chloramphenicol acety 85.7 1 2.3E-05 33.6 3.4 41 83-123 168-212 (219)
25 PLN02226 2-oxoglutarate dehydr 85.4 0.89 1.9E-05 37.6 3.1 28 96-123 426-453 (463)
26 PRK11854 aceF pyruvate dehydro 84.7 1 2.2E-05 38.6 3.2 28 96-123 598-625 (633)
27 TIGR02927 SucB_Actino 2-oxoglu 84.3 1 2.2E-05 38.3 3.1 26 98-123 554-579 (590)
28 PLN02744 dihydrolipoyllysine-r 83.8 1.1 2.3E-05 37.9 3.0 27 96-122 504-530 (539)
29 PRK12467 peptide synthase; Pro 83.6 2.2 4.8E-05 43.5 5.4 45 81-125 2754-2800(3956)
30 TIGR01348 PDHac_trf_long pyruv 83.6 1.2 2.7E-05 37.5 3.3 27 97-123 512-538 (546)
31 PRK12316 peptide synthase; Pro 79.9 3.7 8E-05 43.0 5.5 45 81-125 1664-1710(5163)
32 PRK12316 peptide synthase; Pro 78.8 4.1 8.8E-05 42.7 5.4 45 81-125 4210-4256(5163)
33 PRK12467 peptide synthase; Pro 76.8 4.6 0.0001 41.4 5.1 44 81-124 1223-1268(3956)
34 PRK05691 peptide synthase; Val 75.4 5.5 0.00012 41.1 5.3 43 81-123 784-828 (4334)
35 PRK05691 peptide synthase; Val 74.1 5.6 0.00012 41.1 5.0 43 81-123 3367-3411(4334)
36 KOG0558 Dihydrolipoamide trans 68.5 5.5 0.00012 32.1 2.9 27 96-122 436-462 (474)
37 PRK12270 kgd alpha-ketoglutara 58.2 11 0.00025 34.4 3.3 32 95-126 320-351 (1228)
38 COG4845 Chloramphenicol O-acet 47.7 26 0.00055 26.2 3.2 40 82-121 166-209 (219)
39 COG0508 AceF Pyruvate/2-oxoglu 37.5 33 0.00071 27.9 2.7 29 95-123 367-395 (404)
40 KOG0559 Dihydrolipoamide succi 35.5 39 0.00084 27.6 2.8 26 97-122 421-446 (457)
41 KOG0557 Dihydrolipoamide acety 33.5 54 0.0012 27.3 3.4 25 98-122 437-461 (470)
42 PF00541 Adeno_knob: Adenovira 27.4 61 0.0013 23.4 2.4 18 85-102 20-37 (171)
43 PF00755 Carn_acyltransf: Chol 26.0 1E+02 0.0022 26.2 3.9 29 88-118 294-324 (591)
44 PF13092 CENP-L: Kinetochore c 24.2 64 0.0014 22.7 2.1 14 87-100 137-152 (162)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=99.97 E-value=2.6e-31 Score=213.93 Aligned_cols=123 Identities=30% Similarity=0.506 Sum_probs=104.1
Q ss_pred CCccccccccccEEEEecCCCCC---C-cccccccCc-----cc----------------ccCCCCcEEEEEEecCChhh
Q 047129 1 MDDQESLRFQIPGILFYKNNPSS---S-PTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQ 55 (126)
Q Consensus 1 lddq~~~~~~v~~i~fY~~~~~~---~-~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~ 55 (126)
|| |+.+++|++.||||+++... + .++||+||| || +|||+||+|+||+++++++|
T Consensus 27 lD-~~~~~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~g~~~i~c~~~Gv~fveA~~~~~l~~ 105 (447)
T PLN03157 27 WD-QVGTITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWIGGGRLELECNAMGVLLIEAESEAKLDD 105 (447)
T ss_pred hh-hccccccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEcCCCcEEEEECCCCeEEEEEEeCCcHHH
Confidence 45 55679999999999865321 2 378999999 77 99999999999999999999
Q ss_pred hcCCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 56 LGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 56 l~~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
+.+. .+.+.+++|+|..+........|++.||||+ |||++||+++||+++||.|+++||++||++|||+
T Consensus 106 ~~~~--~~~~~~~~l~P~~~~~~~~~~~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~~~rg~ 176 (447)
T PLN03157 106 FGDF--SPTPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCGGISLGLGISHAVADGQSALHFISEWARIARGE 176 (447)
T ss_pred hhcc--CCCHHHHhhcCCCCcccccccCceEEEEEEEecCCCEEEEEEeeccccchHhHHHHHHHHHHHhcCC
Confidence 9863 3556788899976543344567999999998 9999999999999999999999999999999984
No 2
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=99.97 E-value=1.5e-30 Score=209.52 Aligned_cols=121 Identities=26% Similarity=0.379 Sum_probs=100.7
Q ss_pred cccccccccEEEEecCCCCC-----C-cccccccCc-----cc------------ccCCCCcEEEEEEecCChhhhcCCC
Q 047129 4 QESLRFQIPGILFYKNNPSS-----S-PTVQKEKIP-----LW------------WIASEGILFLKAEANFKLEQLGDAV 60 (126)
Q Consensus 4 q~~~~~~v~~i~fY~~~~~~-----~-~~~Lk~sLs-----fy------------~c~~~Gv~f~ea~~~~~l~~l~~~~ 60 (126)
|+.++.|++.+|||+.+... + .++||+||| || +|||+||+|+||+++++++|+..
T Consensus 31 ~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~i~cn~~Gv~fveA~~~~~l~d~l~-- 108 (444)
T PLN00140 31 QLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLK-- 108 (444)
T ss_pred hcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCccccCCceeEccCCCceEEEEEecCcHHHhcC--
Confidence 56789999999999975421 1 388999999 77 89999999999999999999965
Q ss_pred CCCchHHhhhhccCCCC--CCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 61 QPPYPYLEQLLCNVPGS--QGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 61 ~~~~~~~~~l~~~~~~~--~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
.+....+++|+|..+.. ......|++.||||+ |||++||+++||+++||.|+++|+++||++|||+
T Consensus 109 ~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~rg~ 178 (444)
T PLN00140 109 HPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGH 178 (444)
T ss_pred CCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeeceEcccHHHHHHHHHHHHHHhcCC
Confidence 23334667888864321 122457999999999 9999999999999999999999999999999984
No 3
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=99.96 E-value=9.3e-30 Score=203.89 Aligned_cols=122 Identities=33% Similarity=0.556 Sum_probs=103.4
Q ss_pred ccccccccccEEEEecCCCCC---CcccccccCc-----cc----------------ccCCCCcEEEEEEecCChhhhcC
Q 047129 3 DQESLRFQIPGILFYKNNPSS---SPTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQLGD 58 (126)
Q Consensus 3 dq~~~~~~v~~i~fY~~~~~~---~~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~l~~ 58 (126)
||+.+++|++.||||+.+... +.++||+||| || +||++||.|+||+++++++++.+
T Consensus 28 D~~~~~~~~~~v~fY~~~~~~~~~~~~~Lk~sLs~~L~~~yplaGRl~~~~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~ 107 (431)
T PLN02663 28 DLVVPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLRRDEDGRIEIDCNAEGVLFVEADTPSVIDDFGD 107 (431)
T ss_pred hcccccccccEEEEEcCCCCCCccCHHHHHHHHHHHHhhccccceeeeECCCCCEEEEECCCCceEEEEecCCCHHHhhc
Confidence 366789999999999965432 2478999999 77 89999999999999999999986
Q ss_pred CCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 59 AVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 59 ~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
. .+...+++|+|..+......+.|+|.+|||+ |||++||+++||+++||.|+.+|+++||+++||+
T Consensus 108 ~--~~~~~~~~l~P~~~~~~~~~~~P~l~vQvt~F~cGG~~lg~~~~H~v~Dg~g~~~fl~awa~~~rg~ 175 (431)
T PLN02663 108 F--APTLELRQLIPTVDYSGGISSYPLLVLQVTHFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGL 175 (431)
T ss_pred c--CCCHHHHhhcCCCCCccccccCceEEEEEEEeccCCEEEEEEecccccchHHHHHHHHHHHHHhcCC
Confidence 3 2446677899875433333468999999998 9999999999999999999999999999999984
No 4
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=99.96 E-value=4.6e-30 Score=204.23 Aligned_cols=124 Identities=35% Similarity=0.542 Sum_probs=101.0
Q ss_pred CccccccccccEEEEecCCCCCC----cccccccCc-----cc---------------ccCCCCcEEEEEEecCChhhhc
Q 047129 2 DDQESLRFQIPGILFYKNNPSSS----PTVQKEKIP-----LW---------------WIASEGILFLKAEANFKLEQLG 57 (126)
Q Consensus 2 ddq~~~~~~v~~i~fY~~~~~~~----~~~Lk~sLs-----fy---------------~c~~~Gv~f~ea~~~~~l~~l~ 57 (126)
|.|+.+++|++.||||+.+.+.. .+.||+||| || +|||+||+|+||+++.+++++.
T Consensus 28 D~~~~~~~~~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~~lAGrl~~~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~ 107 (432)
T PF02458_consen 28 DLQLMPPYYVPVLLFYRPPSSSDDSDIVDNLKESLSKTLVHYYPLAGRLRDPDGRLEIDCNDDGVEFVEAEADGTLDDLL 107 (432)
T ss_dssp HHHCCGCSEEEEEEEEE--SSCHHHHHHHHHHHHHHHHHTTSGGGGSEEESSCTTTEEEECTTTEEEEEEEESS-HHHHC
T ss_pred hcCcccccEEEEEEEecCccccccchHHHHHHHHHHHhHhhCcccCcEEcccccceEEEEecCCCEEEEEecccceeecc
Confidence 54788999999999999886542 378999999 66 8999999999999999999999
Q ss_pred CCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 58 DAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 58 ~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
... ++......|+|..+...+..+.|++.||||+ |||++||+++||.++||.|+.+|+++||+++||.
T Consensus 108 ~~~-~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~ 177 (432)
T PF02458_consen 108 DLE-PPSEFLRDLVPQLPVSSEGEDAPLLAVQVTRFKCGGLALGVSFHHAVADGTGFSQFLKAWAEICRGG 177 (432)
T ss_dssp SSS-CCGGGGGGGSSS-SSSEEETTEBSEEEEEEEETTTEEEEEEEEETTT--HHHHHHHHHHHHHHHHTT
T ss_pred ccc-cchHHHHHHhhhcccCCcccccceeEeeeeeecccceeeeeeceeccCcccchhHHHHHHHhhhcCC
Confidence 843 4545566788866544444458999999998 9999999999999999999999999999999984
No 5
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=99.95 E-value=2.3e-28 Score=196.39 Aligned_cols=124 Identities=34% Similarity=0.613 Sum_probs=101.5
Q ss_pred CCccccccccccEEEEecCCCCC--C--cccccccCc-----cc----------------ccCCCCcEEEEEEecCChhh
Q 047129 1 MDDQESLRFQIPGILFYKNNPSS--S--PTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQ 55 (126)
Q Consensus 1 lddq~~~~~~v~~i~fY~~~~~~--~--~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~ 55 (126)
||.+ .+.|++.+|||+.+... . .++||+||+ || +|||+||.|+||+++.++++
T Consensus 38 lD~~--~~~~~~~~~fy~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRL~~~~~g~~~i~c~~~Gv~fvea~~d~~l~~ 115 (436)
T PLN02481 38 LDQN--IAVIVRTVYCFKSEERGSNEDPVDVIKKALSKVLVHYYPLAGRLTISSEGKLIVDCTGEGVVFVEAEANCSIEE 115 (436)
T ss_pred cccC--cceeeeEEEEECCCCcccccCHHHHHHHHHHHHhccccCCCCeeeeCCCCcEEEEEcCCCeEEEEEEecCcHHH
Confidence 4654 34799999999976432 1 488999999 66 99999999999999999999
Q ss_pred hcCCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 56 LGDAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 56 l~~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
+.....+..+.+++|+|..+........|++.+|||+ |||++||+++||.++||.|+.+|+++||++|||+
T Consensus 116 l~~~~~p~~~~~~~l~~~~~~~~~~~~~Pll~vQvT~F~~GG~~lg~~~~H~v~Dg~g~~~fl~~WA~~~rg~ 188 (436)
T PLN02481 116 IGDITKPDPETLGKLVYDVPGAKNILEIPPLTAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGETARGL 188 (436)
T ss_pred hccccCCCCHHHHHhCCCCCCcccccccceeeeccceEecCcEEEEEEeccccccHHHHHHHHHHHHHHhcCC
Confidence 9763223345678888765433333457999999998 9999999999999999999999999999999984
No 6
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=96.37 E-value=0.0088 Score=44.26 Aligned_cols=45 Identities=22% Similarity=0.410 Sum_probs=36.3
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++.+.+-+ .++..|.+.+||.++||.|...|++.+.+...|
T Consensus 112 ~~~pl~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~~ 158 (301)
T PF00668_consen 112 SEGPLFRFTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYAG 158 (301)
T ss_dssp CTSBSEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHHH
T ss_pred cccchhhccccccccccchhcccccccccccccchhhhhhhHHhhhc
Confidence 345888888877 569999999999999999999999998876543
No 7
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=94.66 E-value=0.051 Score=41.21 Aligned_cols=115 Identities=14% Similarity=0.278 Sum_probs=62.4
Q ss_pred ccccccEEEEecCCCC---C-CcccccccCc--------cc----cc-CCCCcEEEEEEecCChhhhcCC--CCCC--ch
Q 047129 7 LRFQIPGILFYKNNPS---S-SPTVQKEKIP--------LW----WI-ASEGILFLKAEANFKLEQLGDA--VQPP--YP 65 (126)
Q Consensus 7 ~~~~v~~i~fY~~~~~---~-~~~~Lk~sLs--------fy----~c-~~~Gv~f~ea~~~~~l~~l~~~--~~~~--~~ 65 (126)
.+.++-.+++|..+.. . +.+.|++.+. |. .- -+-|-..=+...+.+++.=... +..| ..
T Consensus 16 ~pmhv~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~fDl~~Hv~~~~l~~pg~~~ 95 (263)
T PF03007_consen 16 NPMHVGALAIFDPPTDGAPPLDVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDFDLDYHVRRVALPAPGDRA 95 (263)
T ss_pred CCceEEEEEEEEcCCCCCCcchHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCCChHHceEEecCCCCCCHH
Confidence 3567888899987721 1 2234444333 22 11 1234433344444555543321 1111 23
Q ss_pred HHhhhhccCCCCCCCCCCCeeEEeEEe---cCeEEEEecccccccchhHHHHHHHHHHH
Q 047129 66 YLEQLLCNVPGSQGILGCPLLLIQVTR---CGGFILALRFNHTMCDAIGLVQFLKTIEE 121 (126)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~pll~vQvT~---cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~ 121 (126)
.+.+++-......-..+.|+=.+-+-. .|+++|-+.+||+++||.+..+++..+..
T Consensus 96 ~l~~~v~~l~~~pLd~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~ 154 (263)
T PF03007_consen 96 ELQALVSRLASTPLDRSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLD 154 (263)
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhC
Confidence 444444332111111235665555544 67799999999999999999999987654
No 8
>PRK09294 acyltransferase PapA5; Provisional
Probab=94.61 E-value=0.063 Score=42.86 Aligned_cols=41 Identities=27% Similarity=0.345 Sum_probs=35.2
Q ss_pred CeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 84 PLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 84 pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
|++.+.+.. +++..|.+.+||.++||.|+..|++.+.....
T Consensus 98 ~l~~~~~~~~~~~~~l~l~~hH~i~DG~S~~~ll~el~~~Y~ 139 (416)
T PRK09294 98 SLLALDVVPDDGGARVTLYIHHSIADAHHSASLLDELWSRYT 139 (416)
T ss_pred ceEEEEEEEcCCCEEEEEEeccEeEccccHHHHHHHHHHHHH
Confidence 477777766 78899999999999999999999999987653
No 9
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=94.58 E-value=0.061 Score=43.61 Aligned_cols=55 Identities=18% Similarity=0.382 Sum_probs=42.8
Q ss_pred HhhhhccCCCCCCCCCCCeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 67 LEQLLCNVPGSQGILGCPLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 67 ~~~l~~~~~~~~~~~~~pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+.+++-..... +...|...+-+++ |-|=.|.+.+||+++||.|+.+.+...+++-
T Consensus 98 fs~Fi~~k~~~--t~~~PqI~v~~~r~~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Y 153 (439)
T COG4908 98 FSRFIVRKLNI--TKESPQIKVFVVRQTVGDTLVINLHHAVCDGRGFLEYLYLLARLY 153 (439)
T ss_pred HHHHHhccccc--ccCCCeEEEeeehhccCcEEEEEechhhhcchhHHHHHHHHHHHH
Confidence 44555443321 2447888888899 9999999999999999999999998888764
No 10
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=92.37 E-value=0.17 Score=40.61 Aligned_cols=39 Identities=18% Similarity=0.428 Sum_probs=33.4
Q ss_pred CCeeEEeEEe---cCeEEEEecccccccchhHHHHHHHHHHH
Q 047129 83 CPLLLIQVTR---CGGFILALRFNHTMCDAIGLVQFLKTIEE 121 (126)
Q Consensus 83 ~pll~vQvT~---cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~ 121 (126)
.|+..+.+.+ .|+.++-+.+||.++||.|...|++.+.+
T Consensus 107 ~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~ 148 (446)
T TIGR02946 107 RPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLD 148 (446)
T ss_pred CCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcC
Confidence 3888887766 57899999999999999999999987765
No 11
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=89.35 E-value=0.49 Score=35.44 Aligned_cols=29 Identities=31% Similarity=0.476 Sum_probs=24.6
Q ss_pred eEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 95 GFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 95 G~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-+-+++++.|.+.||.-+..|++.+.+..
T Consensus 195 ~~~lslt~DHRvidG~~aa~Fl~~l~~~l 223 (231)
T PF00198_consen 195 VMNLSLTFDHRVIDGAEAARFLKDLKELL 223 (231)
T ss_dssp EEEEEEEEETTTS-HHHHHHHHHHHHHHH
T ss_pred EEEeEEeccceEEcHHHHHHHHHHHHHHH
Confidence 35678999999999999999999998764
No 12
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=89.25 E-value=0.56 Score=42.39 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=36.7
Q ss_pred CCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 83 CPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 83 ~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
.|++++.+.+ -+...+-+++||.++||.|...+++.+++..+
T Consensus 118 ~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~ 161 (1296)
T PRK10252 118 KPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYC 161 (1296)
T ss_pred CCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHH
Confidence 4899999888 67889999999999999999999998877643
No 13
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=88.62 E-value=0.46 Score=38.36 Aligned_cols=28 Identities=32% Similarity=0.552 Sum_probs=25.5
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.++||.-+.+|++.+.+..
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~l 402 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELL 402 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHH
Confidence 6799999999999999999999998753
No 14
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=88.55 E-value=1.5 Score=35.60 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=30.3
Q ss_pred CCeeEEeEEe----cCeEEEEecccccccchhHHHHHHHHHHHH
Q 047129 83 CPLLLIQVTR----CGGFILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 83 ~pll~vQvT~----cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
.|+-.+-|-. .+..-|.+.+||+++||.|+..|.++.-+.
T Consensus 124 ~P~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~ 167 (480)
T PF07247_consen 124 KPLWRLIVLPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEA 167 (480)
T ss_pred CCCeEEEEECCCCCCcceEEEEEecccccccHHHHHHHHHHHHH
Confidence 3666655544 346788999999999999999998876543
No 15
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=88.20 E-value=0.51 Score=36.90 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=24.9
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|++++.|.+.||..+.+|++.|.+.-
T Consensus 270 m~lslt~DHRviDGa~aa~Fl~~lk~~L 297 (306)
T PRK11857 270 MHLTVAADHRWIDGATIGRFASRVKELL 297 (306)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHh
Confidence 3488899999999999999999998764
No 16
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=88.07 E-value=1.1 Score=33.05 Aligned_cols=38 Identities=16% Similarity=0.360 Sum_probs=25.8
Q ss_pred CCCeeEE-eEEe-cCe--EEEEecccccccchhHHHHHHHHH
Q 047129 82 GCPLLLI-QVTR-CGG--FILALRFNHTMCDAIGLVQFLKTI 119 (126)
Q Consensus 82 ~~pll~v-QvT~-cGG--~~lg~~~~H~v~Dg~~~~~Fl~~W 119 (126)
..|.++. |.+. .|- +-|++..||+++||.=+.+|++..
T Consensus 164 ~~P~it~GK~~~~~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 164 SIPRITWGKYFEENGRLLMPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp SS-EEEEE--EEETTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred cccEEEeeeeEeECCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence 3577665 5666 444 889999999999999999998753
No 17
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=87.95 E-value=0.52 Score=38.58 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=25.1
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|++++.|.+.||..+.+|++.|.+.-
T Consensus 400 m~lsls~DHRviDGa~aa~Fl~~lk~~l 427 (435)
T TIGR01349 400 MSVTLSCDHRVIDGAVGAEFLKSFKKYL 427 (435)
T ss_pred EEEeEeecchhhCcHHHHHHHHHHHHHH
Confidence 4589999999999999999999998763
No 18
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=87.78 E-value=0.58 Score=38.11 Aligned_cols=28 Identities=11% Similarity=0.236 Sum_probs=24.9
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|++++.|.|.||.-+.+||+.|.+.-
T Consensus 378 m~lslt~DHRviDGa~aa~Fl~~lk~~l 405 (416)
T PLN02528 378 MTVTIGADHRVLDGATVARFCNEWKSYV 405 (416)
T ss_pred EEEeEeccchhcCcHHHHHHHHHHHHHH
Confidence 4489999999999999999999998753
No 19
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=86.79 E-value=0.72 Score=37.68 Aligned_cols=27 Identities=37% Similarity=0.630 Sum_probs=24.8
Q ss_pred EEEEecccccccchhHHHHHHHHHHHH
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+-|++++.|.+.||..+.+|++.|.+.
T Consensus 381 m~lsLs~DHRviDGa~AA~FL~~lk~~ 407 (418)
T PTZ00144 381 MYLALTYDHRLIDGRDAVTFLKKIKDL 407 (418)
T ss_pred EEEEEecchhhhChHHHHHHHHHHHHH
Confidence 568999999999999999999999875
No 20
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=86.30 E-value=0.75 Score=36.61 Aligned_cols=27 Identities=26% Similarity=0.476 Sum_probs=24.3
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|.+++.|.+.||..+.+|++.|.+.-
T Consensus 313 ~lsls~DHRviDGa~aa~Fl~~lk~~l 339 (347)
T PRK14843 313 SLGLTIDHRVVDGMAGAKFMKDLKELI 339 (347)
T ss_pred EEEEecchhhhCcHHHHHHHHHHHHHh
Confidence 478999999999999999999998753
No 21
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=86.02 E-value=0.78 Score=38.54 Aligned_cols=28 Identities=18% Similarity=0.376 Sum_probs=25.0
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.|.+..
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~l 539 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLL 539 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHH
Confidence 5589999999999999999999998753
No 22
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=85.92 E-value=0.83 Score=37.12 Aligned_cols=27 Identities=41% Similarity=0.540 Sum_probs=24.4
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|++++.|.+.||..+.+||+.|.+.-
T Consensus 371 ~lsls~DHRviDGa~aa~Fl~~l~~~l 397 (407)
T PRK05704 371 YLALSYDHRIIDGKEAVGFLVTIKELL 397 (407)
T ss_pred EEEEEechhhhCcHHHHHHHHHHHHHh
Confidence 388999999999999999999998753
No 23
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=85.82 E-value=0.89 Score=36.91 Aligned_cols=27 Identities=41% Similarity=0.556 Sum_probs=24.6
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|++++.|.+.||..+.+||+.|.+.-
T Consensus 367 ~lsLt~DHRviDGa~aa~Fl~~l~~~l 393 (403)
T TIGR01347 367 YLALSYDHRLIDGKEAVTFLVTIKELL 393 (403)
T ss_pred EEEEEecchhhChHHHHHHHHHHHHHh
Confidence 489999999999999999999998763
No 24
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=85.74 E-value=1 Score=33.58 Aligned_cols=41 Identities=17% Similarity=0.427 Sum_probs=30.4
Q ss_pred CCeeEE-eEEe-cCe--EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 83 CPLLLI-QVTR-CGG--FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 83 ~pll~v-QvT~-cGG--~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
.|.++. +... .|. +.|++..||+++||.=..+|+....+..
T Consensus 168 ~P~it~GKy~~~~gr~~mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~ 212 (219)
T PRK13757 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYC 212 (219)
T ss_pred CcEEEeeceEEECCEEEEEEEEEEehhccchHHHHHHHHHHHHHH
Confidence 355543 4444 454 7888899999999999999998877653
No 25
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=85.35 E-value=0.89 Score=37.65 Aligned_cols=28 Identities=25% Similarity=0.509 Sum_probs=25.3
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.+++.|.+.||..+.+|++.|.+.-
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~L 453 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVV 453 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHh
Confidence 5688999999999999999999998753
No 26
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=84.66 E-value=1 Score=38.61 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=24.8
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|+++++|.+.||.-+.+|++.|.+.-
T Consensus 598 m~lslt~DHRviDGa~aa~Fl~~lk~~L 625 (633)
T PRK11854 598 LPLSLSYDHRVIDGADGARFITIINDRL 625 (633)
T ss_pred EEEeEEccchhcchHHHHHHHHHHHHHH
Confidence 3488999999999999999999998753
No 27
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=84.33 E-value=1 Score=38.32 Aligned_cols=26 Identities=35% Similarity=0.624 Sum_probs=24.0
Q ss_pred EEecccccccchhHHHHHHHHHHHHh
Q 047129 98 LALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 98 lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
|.+++.|.|.||..+.+||+.|.+.-
T Consensus 554 lsls~DHRviDGa~aa~Fl~~lk~~L 579 (590)
T TIGR02927 554 LPLTYDHQLIDGADAGRFLTTIKDRL 579 (590)
T ss_pred EeeeccchhcCcHHHHHHHHHHHHHH
Confidence 89999999999999999999998753
No 28
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=83.78 E-value=1.1 Score=37.87 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=24.5
Q ss_pred EEEEecccccccchhHHHHHHHHHHHH
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+-|++++.|.|.||..+.+||+.|.+.
T Consensus 504 m~lsLs~DHRvIDGa~AA~FL~~lk~~ 530 (539)
T PLN02744 504 MSVTLSCDHRVIDGAIGAEWLKAFKGY 530 (539)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHH
Confidence 458899999999999999999999875
No 29
>PRK12467 peptide synthase; Provisional
Probab=83.57 E-value=2.2 Score=43.53 Aligned_cols=45 Identities=24% Similarity=0.318 Sum_probs=38.8
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++++.+-+ .+...+-+++||.++||.|..-+++.+.+..+|
T Consensus 2754 ~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~~ 2800 (3956)
T PRK12467 2754 LSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYFG 2800 (3956)
T ss_pred CCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhcC
Confidence 457899888887 678889999999999999999999999887654
No 30
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=83.56 E-value=1.2 Score=37.45 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=24.3
Q ss_pred EEEecccccccchhHHHHHHHHHHHHh
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
-|.+++.|.|.||.-+.+||+.|.+.-
T Consensus 512 ~ltls~DHRviDGa~aa~Fl~~~~~~l 538 (546)
T TIGR01348 512 PLSLSYDHRVIDGADAARFTTYICESL 538 (546)
T ss_pred EEeEeccchhcChHHHHHHHHHHHHHH
Confidence 378999999999999999999998753
No 31
>PRK12316 peptide synthase; Provisional
Probab=79.93 E-value=3.7 Score=42.96 Aligned_cols=45 Identities=24% Similarity=0.271 Sum_probs=38.4
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++++.+.+ .+...+-+++||.++||.|...+++.++...+|
T Consensus 1664 ~~~pl~r~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~Y~~ 1710 (5163)
T PRK12316 1664 TRAPLLRLVLVRTGEGRHHLIYTNHHILMDGWSNAQLLGEVLQRYAG 1710 (5163)
T ss_pred CCCCcEEEEEEEECCCeEEEEEEecceeeccccHHHHHHHHHHHhcC
Confidence 346888888877 677888999999999999999999999887654
No 32
>PRK12316 peptide synthase; Provisional
Probab=78.76 E-value=4.1 Score=42.67 Aligned_cols=45 Identities=27% Similarity=0.277 Sum_probs=37.8
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++++-+.+ .|...+-+++||.+.||.|..-+++.+.+...|
T Consensus 4210 ~~~pl~R~~l~~~~~~~~~l~l~~HH~i~DGwS~~il~~el~~~Y~~ 4256 (5163)
T PRK12316 4210 QRAPLLRLVLVRTAEGRHHLIYTNHHILMDGWSNSQLLGEVLERYSG 4256 (5163)
T ss_pred CCCCceEEEEEEEcCCEEEEEEEccceeeccccHHHHHHHHHHHhcC
Confidence 346888887777 677888899999999999999999998877654
No 33
>PRK12467 peptide synthase; Provisional
Probab=76.81 E-value=4.6 Score=41.37 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=36.7
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
...|++++.+-+ .+...+-+++||.++||.|...+++.+.+..+
T Consensus 1223 ~~~pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ill~el~~~Y~ 1268 (3956)
T PRK12467 1223 EQGPLLRVGLLRLAADEHVLVLTLHHIVSDGWSMQVLVDELVALYA 1268 (3956)
T ss_pred CCCcceeEEEEEECCCeEEEEEecchhhhhHhHHHHHHHHHHHHHH
Confidence 356888888777 56677889999999999999999998887653
No 34
>PRK05691 peptide synthase; Validated
Probab=75.41 E-value=5.5 Score=41.10 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=37.1
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
...|++.+.+.+ .+...+-+++||.++||.|...+++.+++..
T Consensus 784 ~~~pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ll~~el~~~Y 828 (4334)
T PRK05691 784 EKGPLLRVTLVRLDDEEHQLLVTLHHIVADGWSLNILLDEFSRLY 828 (4334)
T ss_pred CCCCceEEEEEEEcCCeEEEEEeeCceeeccchHHHHHHHHHHHH
Confidence 456899988888 6778899999999999999999999888764
No 35
>PRK05691 peptide synthase; Validated
Probab=74.08 E-value=5.6 Score=41.08 Aligned_cols=43 Identities=16% Similarity=0.212 Sum_probs=36.2
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
...|++++.+.+ .+...+-+++||.++||.|..-+++.+.+..
T Consensus 3367 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~DGwS~~ll~~dl~~~Y 3411 (4334)
T PRK05691 3367 LNQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMNDFFEIY 3411 (4334)
T ss_pred CCCCcEEEEEEEecCcEEEEEEEehhhhhccccHHHHHHHHHHHH
Confidence 346888888887 5667889999999999999999998887654
No 36
>KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion]
Probab=68.47 E-value=5.5 Score=32.13 Aligned_cols=27 Identities=15% Similarity=0.334 Sum_probs=24.0
Q ss_pred EEEEecccccccchhHHHHHHHHHHHH
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+-+.|+..|.|.||.+..+|-..|-+.
T Consensus 436 M~VswsADHRViDGaTmarFsn~WK~Y 462 (474)
T KOG0558|consen 436 MMVSWSADHRVIDGATMARFSNQWKEY 462 (474)
T ss_pred EEEEeecCceeeccHHHHHHHHHHHHH
Confidence 567789999999999999999999764
No 37
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=58.21 E-value=11 Score=34.39 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=27.4
Q ss_pred eEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 95 GFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 95 G~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
-+-|.+++.|.|.||.....|++.|.++--||
T Consensus 320 vMtLTlTyDHRVIdGA~sg~FL~~ik~lLeG~ 351 (1228)
T PRK12270 320 VMTLTSTYDHRIIQGAESGEFLRTIHQLLLGE 351 (1228)
T ss_pred eEEeeeeccceeeccHhHHHHHHHHHHHHhcc
Confidence 34677889999999999999999999886654
No 38
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=47.70 E-value=26 Score=26.20 Aligned_cols=40 Identities=20% Similarity=0.389 Sum_probs=27.5
Q ss_pred CCCeeEE-eEEe-cCe--EEEEecccccccchhHHHHHHHHHHH
Q 047129 82 GCPLLLI-QVTR-CGG--FILALRFNHTMCDAIGLVQFLKTIEE 121 (126)
Q Consensus 82 ~~pll~v-QvT~-cGG--~~lg~~~~H~v~Dg~~~~~Fl~~WA~ 121 (126)
..|.+.. |-+. .|= +-+++..||+.+||.=..+|+.-.-+
T Consensus 166 ~~PiF~~Grf~~~~Gkl~lPlavq~hHA~vDG~Hi~~l~~~lQ~ 209 (219)
T COG4845 166 GQPIFYAGRFYEEDGKLTLPLAVQAHHANVDGFHIGQLFDQLQT 209 (219)
T ss_pred cceeEeecceeccCCeEEEeEEEEecccccchhhHHHHHHHHHH
Confidence 3555543 3333 453 45678899999999999999876544
No 39
>COG0508 AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion]
Probab=37.52 E-value=33 Score=27.91 Aligned_cols=29 Identities=24% Similarity=0.426 Sum_probs=24.6
Q ss_pred eEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 95 GFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 95 G~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
=+-+.+++.|.+.||.-+..|++...++.
T Consensus 367 mm~lsls~DHRviDGa~aa~Fl~~ik~~l 395 (404)
T COG0508 367 MMYLSLSYDHRVIDGAEAARFLVALKELL 395 (404)
T ss_pred eEeecccccccccccHHHHHHHHHHHHHh
Confidence 35677899999999999999999877653
No 40
>KOG0559 consensus Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) [Energy production and conversion]
Probab=35.54 E-value=39 Score=27.55 Aligned_cols=26 Identities=35% Similarity=0.620 Sum_probs=21.8
Q ss_pred EEEecccccccchhHHHHHHHHHHHH
Q 047129 97 ILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 97 ~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
=|++++.|.+.||.-+..||+..-+.
T Consensus 421 YvALTYDHRliDGREAVtFLr~iK~~ 446 (457)
T KOG0559|consen 421 YVALTYDHRLIDGREAVTFLRKIKEA 446 (457)
T ss_pred EEEeeccccccccHHHHHHHHHHHHH
Confidence 35678999999999999999876554
No 41
>KOG0557 consensus Dihydrolipoamide acetyltransferase [Energy production and conversion]
Probab=33.55 E-value=54 Score=27.34 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=21.6
Q ss_pred EEecccccccchhHHHHHHHHHHHH
Q 047129 98 LALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 98 lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+.++..|.+.||.-+.+||+.+.++
T Consensus 437 VTls~DhRvvdga~aa~Fl~~fk~~ 461 (470)
T KOG0557|consen 437 VTLSADHRVVDGAVAARFLDEFKEN 461 (470)
T ss_pred EEEecCcceecHHHHHHHHHHHHHH
Confidence 4457789999999999999998875
No 42
>PF00541 Adeno_knob: Adenoviral fibre protein (knob domain); InterPro: IPR000978 Adenoviruses are responsible for diseases such as pneumonia, cystitis, conjunctivitis and diarrhoea, all of which can be fatal to patients who are immunocompromised []. Viral infection commences with recognition of host cell receptors by means of specialised proteins on viral surfaces. Specific attachment of adenovirus is achieved through interactions between host-cell receptors and the adenovirus fibre protein and is mediated by the globular carboxy-terminal domain of the adenovirus fibre protein, termed the carboxy-terminal knob domain.; GO: 0007155 cell adhesion, 0019058 viral infectious cycle, 0019062 virion attachment to host cell surface receptor; PDB: 3EXW_A 3F0Y_I 2W9L_S 2J1K_I 2J2J_F 2WBV_E 2WGU_C 1UXE_B 2WGT_B 3QND_E ....
Probab=27.44 E-value=61 Score=23.36 Aligned_cols=18 Identities=28% Similarity=0.471 Sum_probs=13.9
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 20 KL~L~LTKcGs~Vlgtvs 37 (171)
T PF00541_consen 20 KLTLCLTKCGSQVLGTVS 37 (171)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeeCCEEEEEEE
Confidence 466778889999998653
No 43
>PF00755 Carn_acyltransf: Choline/Carnitine o-acyltransferase; InterPro: IPR000542 A number of eukaryotic acetyltransferases can, on the basis of sequence similarities, be grouped together into a family. These enzymes include: Choline o-acetyltransferase 2.3.1.6 from EC, an enzyme that catalyses the biosynthesis of the neurotransmitter acetylcholine []. Carnitine o-acetyltransferase 2.3.1.7 from EC []. Peroxisomal carnitine octanoyltransferase 2.3.1.137 from EC, a fatty acid beta-oxidation pathway enzyme which is involved in the transport of medium-chain acyl-coenzyme A's from peroxisome to mitochondria []. Mitochondrial carnitine palmitoyltransferases I and II 2.3.1.21 from EC (CPT), enzymes involved in fatty acid metabolism and transport []. Mycoplasma pneumoniae putative acetyltransferase C09_orf600. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 2DEB_B 2H4T_A 2FW3_A 2RCU_B 2FYO_A 1S5O_A 1NM8_A 1T7Q_B 2H3W_B 1NDI_B ....
Probab=26.01 E-value=1e+02 Score=26.15 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=19.4
Q ss_pred EeEEe--cCeEEEEecccccccchhHHHHHHHH
Q 047129 88 IQVTR--CGGFILALRFNHTMCDAIGLVQFLKT 118 (126)
Q Consensus 88 vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~ 118 (126)
+|+.. +|- .|+.+.|..+||.....++..
T Consensus 294 lq~iV~~nG~--~g~~~EHS~~DG~~~~~~~~~ 324 (591)
T PF00755_consen 294 LQLIVFKNGR--AGLNFEHSWADGTVVLRLVEF 324 (591)
T ss_dssp EEEEEETTS---EEEEE-STT--HHHHHHHHHH
T ss_pred ceEEEcCCCC--eEEecCCCCchhHHHHHHHHh
Confidence 55544 554 489999999999999988876
No 44
>PF13092 CENP-L: Kinetochore complex Sim4 subunit Fta1
Probab=24.16 E-value=64 Score=22.75 Aligned_cols=14 Identities=36% Similarity=1.108 Sum_probs=12.1
Q ss_pred EEeEEe--cCeEEEEe
Q 047129 87 LIQVTR--CGGFILAL 100 (126)
Q Consensus 87 ~vQvT~--cGG~~lg~ 100 (126)
.+++++ |||++||.
T Consensus 137 ~~~L~kI~~~~~~l~~ 152 (162)
T PF13092_consen 137 AVRLSKISCGGFVLGS 152 (162)
T ss_pred eeEEEEEecceeEeec
Confidence 788999 99999883
Done!