Query 047129
Match_columns 126
No_of_seqs 103 out of 1086
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 13:41:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 6E-31 2.1E-35 209.7 12.5 122 2-126 33-180 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 1.9E-28 6.5E-33 194.3 10.3 122 2-126 32-182 (421)
3 2xr7_A Malonyltransferase; xen 99.9 1.7E-27 5.7E-32 190.0 8.2 126 1-126 27-188 (453)
4 2e1v_A Acyl transferase; BAHD 99.9 2.7E-27 9.2E-32 189.0 7.1 126 1-126 32-193 (454)
5 2rkv_A Trichothecene 3-O-acety 99.9 2.9E-23 1E-27 165.1 8.5 119 7-126 17-178 (451)
6 4hvm_A Tlmii; PSI-biology, mid 96.0 0.014 4.9E-07 45.8 6.4 45 81-125 117-163 (493)
7 1q9j_A PAPA5, polyketide synth 96.0 0.0092 3.2E-07 45.5 5.1 44 81-124 100-144 (422)
8 2jgp_A Tyrocidine synthetase 3 95.8 0.023 7.8E-07 44.9 6.8 45 81-125 197-243 (520)
9 1l5a_A Amide synthase, VIBH; n 95.7 0.02 6.8E-07 43.9 5.9 44 81-124 101-146 (436)
10 2xhg_A Tyrocidine synthetase A 94.3 0.081 2.8E-06 40.9 5.8 43 81-123 123-166 (466)
11 2vsq_A Surfactin synthetase su 92.5 0.18 6.3E-06 44.6 5.7 44 81-124 122-167 (1304)
12 3cla_A Type III chloramphenico 92.4 0.11 3.7E-06 37.4 3.5 28 96-123 181-208 (213)
13 2i9d_A Chloramphenicol acetylt 92.2 0.12 4.1E-06 37.3 3.5 27 96-122 189-215 (217)
14 1q23_A Chloramphenicol acetylt 92.1 0.12 4.3E-06 37.2 3.5 28 96-123 185-212 (219)
15 3b8k_A PDCE2;, dihydrolipoylly 91.9 0.15 5.1E-06 37.3 3.8 28 96-123 204-231 (239)
16 3rqc_A Probable lipoamide acyl 91.5 0.13 4.5E-06 37.2 3.1 28 96-123 187-214 (224)
17 1dpb_A Dihydrolipoyl-transacet 91.5 0.16 5.4E-06 37.2 3.5 28 96-123 208-235 (243)
18 1scz_A E2, dihydrolipoamide su 91.5 0.16 5.5E-06 37.0 3.5 28 96-123 196-223 (233)
19 2ii3_A Lipoamide acyltransfera 91.0 0.19 6.4E-06 37.3 3.5 28 96-123 224-251 (262)
20 3mae_A 2-oxoisovalerate dehydr 90.4 0.23 7.7E-06 36.8 3.5 28 96-123 210-237 (256)
21 3l60_A Branched-chain alpha-ke 90.2 0.24 8.3E-06 36.5 3.5 28 96-123 205-232 (250)
22 3dva_I Dihydrolipoyllysine-res 80.1 0.35 1.2E-05 38.3 0.0 28 96-123 391-418 (428)
23 2xt6_A 2-oxoglutarate decarbox 70.2 3.3 0.00011 36.6 3.5 28 96-123 192-219 (1113)
24 3fot_A 15-O-acetyltransferase; 62.9 4.7 0.00016 32.5 2.9 27 95-121 177-203 (519)
25 2bzv_A Fiber protein 2; recept 32.1 31 0.0011 24.1 2.6 18 85-102 37-54 (181)
26 1h7z_A Adenovirus fibre protei 30.5 31 0.0011 24.4 2.4 18 85-102 30-47 (194)
27 1qhv_A Protein (adenovirus fib 29.5 33 0.0011 24.2 2.4 18 85-102 33-50 (195)
28 2j2j_A Fiber protein; CAR, KNO 28.7 36 0.0012 24.1 2.5 17 85-101 39-55 (197)
29 1knb_A Adenovirus type 5 fiber 28.5 35 0.0012 24.1 2.4 18 85-102 35-52 (196)
30 1kac_A Protein (fiber KNOB pro 28.4 36 0.0012 23.8 2.4 18 85-102 27-44 (185)
31 1uxa_A Fiber protein; viral pr 28.2 36 0.0012 24.0 2.4 17 85-101 34-50 (194)
32 2qlk_A Fiber, PIV; fibre, CD46 27.0 39 0.0013 24.2 2.4 18 85-102 46-63 (213)
33 3exv_A Fiber protein, PIV; fib 27.0 39 0.0013 24.2 2.4 19 85-103 45-63 (213)
34 3cnc_A Fiber protein; adenovir 26.2 41 0.0014 24.2 2.4 18 85-102 52-69 (220)
35 2wst_A Putative fiber protein; 25.5 43 0.0015 23.9 2.4 17 85-101 59-75 (208)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=99.97 E-value=6e-31 Score=209.66 Aligned_cols=122 Identities=30% Similarity=0.495 Sum_probs=104.4
Q ss_pred CccccccccccEEEEecCCCCCC---cccccccCc-----cc----------------ccCCCCcEEEEEEecCChhhhc
Q 047129 2 DDQESLRFQIPGILFYKNNPSSS---PTVQKEKIP-----LW----------------WIASEGILFLKAEANFKLEQLG 57 (126)
Q Consensus 2 ddq~~~~~~v~~i~fY~~~~~~~---~~~Lk~sLs-----fy----------------~c~~~Gv~f~ea~~~~~l~~l~ 57 (126)
|.+ .+++|++.+|||+.+.... .++||+||| || +|||+||.|+||+++++++++.
T Consensus 33 D~~-~~~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~ 111 (439)
T 4g22_A 33 DLV-VPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFG 111 (439)
T ss_dssp HHS-CCTTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGT
T ss_pred HhC-ccccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhc
Confidence 555 6789999999999754321 488999999 77 8999999999999999999997
Q ss_pred CCCCCCchHHhhhhccCCCCCCCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 58 DAVQPPYPYLEQLLCNVPGSQGILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 58 ~~~~~~~~~~~~l~~~~~~~~~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
+. . |.+.+++|+|..+...+..+.|++.||||+ |||++||+++||.++||.|+++|+++||+++||+
T Consensus 112 ~~-~-p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~ 180 (439)
T 4g22_A 112 DF-A-PTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGL 180 (439)
T ss_dssp TC-C-CCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTTC
T ss_pred CC-C-CCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCCC
Confidence 73 3 556788999876544444568999999999 9999999999999999999999999999999984
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=99.95 E-value=1.9e-28 Score=194.33 Aligned_cols=122 Identities=25% Similarity=0.373 Sum_probs=101.2
Q ss_pred CccccccccccEEEEecCCCCC--C----cccccccCc-----cc------------ccCCCCcEEEEEEecCChhhhcC
Q 047129 2 DDQESLRFQIPGILFYKNNPSS--S----PTVQKEKIP-----LW------------WIASEGILFLKAEANFKLEQLGD 58 (126)
Q Consensus 2 ddq~~~~~~v~~i~fY~~~~~~--~----~~~Lk~sLs-----fy------------~c~~~Gv~f~ea~~~~~l~~l~~ 58 (126)
|++ .++.|++.+|||+.+... + .+.||+||+ || +||++||.|+||+++++++++..
T Consensus 32 D~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~ 110 (421)
T 2bgh_A 32 DQL-LLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQ 110 (421)
T ss_dssp HHT-SCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEETTTEEECCCCCEEEEEEEESSCHHHHHS
T ss_pred Hhc-ccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccCCCcEEEEcCCceEEEEEEEcCCHHHHhc
Confidence 554 578999999999975431 1 388999999 77 79999999999999999999986
Q ss_pred CCCCCchHHhhhhccCCCCCC----CCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcCC
Q 047129 59 AVQPPYPYLEQLLCNVPGSQG----ILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWHE 126 (126)
Q Consensus 59 ~~~~~~~~~~~l~~~~~~~~~----~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg~ 126 (126)
. .++.+.+++|+|... ... ..+.|++.+|||+ |||++||+++||.++||.|+++|+++||+++||+
T Consensus 111 ~-~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~ 182 (421)
T 2bgh_A 111 N-VVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGE 182 (421)
T ss_dssp C-CSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTC
T ss_pred c-CCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCC
Confidence 3 234346778988652 211 3458999999999 9999999999999999999999999999999984
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=99.94 E-value=1.7e-27 Score=190.01 Aligned_cols=126 Identities=17% Similarity=0.184 Sum_probs=100.4
Q ss_pred CCccccccccccEEEEecCCCCC-----C-cccccccCc-----cc------------------ccC-CCCcEEEEEEec
Q 047129 1 MDDQESLRFQIPGILFYKNNPSS-----S-PTVQKEKIP-----LW------------------WIA-SEGILFLKAEAN 50 (126)
Q Consensus 1 lddq~~~~~~v~~i~fY~~~~~~-----~-~~~Lk~sLs-----fy------------------~c~-~~Gv~f~ea~~~ 50 (126)
||++..+..|++.+|||+.+.+. + .+.||+||+ || +|| ++||.|+||+++
T Consensus 27 lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~ 106 (453)
T 2xr7_A 27 FDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESD 106 (453)
T ss_dssp HHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTTCCCEEEEETTCCCEEEEEECC
T ss_pred HHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCCCCEEEEecCCCceEEEEEecC
Confidence 35655555699999999865431 1 378999999 76 688 599999999999
Q ss_pred CChhhhcCCCCCCchHHhhhhccCCCCCC---CCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc-
Q 047129 51 FKLEQLGDAVQPPYPYLEQLLCNVPGSQG---ILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW- 124 (126)
Q Consensus 51 ~~l~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r- 124 (126)
.+++++......+.+.+++|+|..+.... ..+.|++.+|||+ |||++||+++||.++||.|+++|+++||+++|
T Consensus 107 ~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~ 186 (453)
T 2xr7_A 107 MDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKF 186 (453)
T ss_dssp SCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHT
T ss_pred CCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhc
Confidence 99999975322345567889886543221 1127999999999 99999999999999999999999999999999
Q ss_pred CC
Q 047129 125 HE 126 (126)
Q Consensus 125 g~ 126 (126)
|+
T Consensus 187 G~ 188 (453)
T 2xr7_A 187 GG 188 (453)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=99.94 E-value=2.7e-27 Score=189.00 Aligned_cols=126 Identities=20% Similarity=0.200 Sum_probs=99.6
Q ss_pred CCccccccccccEEEEecCCCC-C----C-cccccccCc-----cc------------------ccC-CCCcEEEEEEec
Q 047129 1 MDDQESLRFQIPGILFYKNNPS-S----S-PTVQKEKIP-----LW------------------WIA-SEGILFLKAEAN 50 (126)
Q Consensus 1 lddq~~~~~~v~~i~fY~~~~~-~----~-~~~Lk~sLs-----fy------------------~c~-~~Gv~f~ea~~~ 50 (126)
||++..+..|++.+|||+.+.. . + .++||+||+ || +|| ++||.|+||+++
T Consensus 32 lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~ 111 (454)
T 2e1v_A 32 FDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECN 111 (454)
T ss_dssp HHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEEC
T ss_pred HHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeeeccCCCCCEEEEECCCCcEEEEEEEeC
Confidence 3565555569999999996543 1 1 378999999 66 688 599999999999
Q ss_pred CChhhhcCCCCCCchHHhhhhccCCCCC---CCCCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc-
Q 047129 51 FKLEQLGDAVQPPYPYLEQLLCNVPGSQ---GILGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW- 124 (126)
Q Consensus 51 ~~l~~l~~~~~~~~~~~~~l~~~~~~~~---~~~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r- 124 (126)
.+++++......+.+.+++|+|..+... ...+.|++.+|||+ |||++||+++||.++||.|+++|+++||+++|
T Consensus 112 ~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~ 191 (454)
T 2e1v_A 112 LDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARS 191 (454)
T ss_dssp SCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhcc
Confidence 9999997521123456778988654321 11335999999999 99999999999999999999999999999999
Q ss_pred CC
Q 047129 125 HE 126 (126)
Q Consensus 125 g~ 126 (126)
|+
T Consensus 192 g~ 193 (454)
T 2e1v_A 192 GN 193 (454)
T ss_dssp TS
T ss_pred CC
Confidence 63
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.88 E-value=2.9e-23 Score=165.11 Aligned_cols=119 Identities=16% Similarity=0.159 Sum_probs=86.7
Q ss_pred ccccccEEEEecCCCCC--C--cccccccCc-----cc---------------------ccCCCCcEEEEEEecC-----
Q 047129 7 LRFQIPGILFYKNNPSS--S--PTVQKEKIP-----LW---------------------WIASEGILFLKAEANF----- 51 (126)
Q Consensus 7 ~~~~v~~i~fY~~~~~~--~--~~~Lk~sLs-----fy---------------------~c~~~Gv~f~ea~~~~----- 51 (126)
+++|++.+|||+.+.+. + .+.||+||+ || +|+++++.|++++++.
T Consensus 17 ~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~~~va~~~~d~~~p 96 (451)
T 2rkv_A 17 LSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRVVVKDLRDDPSAP 96 (451)
T ss_dssp GGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCEEEEEECTTCTTSC
T ss_pred cccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCeEEEEeCCCCCCCC
Confidence 68999999999954321 1 388999999 77 2455555578888865
Q ss_pred ChhhhcCCCCCCchHHh--hhhccC--CCC---CCCCCCCeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 52 KLEQLGDAVQPPYPYLE--QLLCNV--PGS---QGILGCPLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 52 ~l~~l~~~~~~~~~~~~--~l~~~~--~~~---~~~~~~pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+++++... ..|.+.++ .|.|.. +.. ....+.|++.||||. |||++||+++||.++||.|+++|+++||+++
T Consensus 97 ~~~~l~~~-~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg~~~~H~v~Dg~g~~~Fl~awa~~~ 175 (451)
T 2rkv_A 97 TIEGMRKA-GYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAMDMVGQDAVIRLLSKAC 175 (451)
T ss_dssp BHHHHHHH-TSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHc-CCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEecCceeeeeeehhccccHHHHHHHHHHHHHHh
Confidence 57777532 23333333 243432 111 122358999999999 9999999999999999999999999999999
Q ss_pred cCC
Q 047129 124 WHE 126 (126)
Q Consensus 124 rg~ 126 (126)
||+
T Consensus 176 rg~ 178 (451)
T 2rkv_A 176 RND 178 (451)
T ss_dssp HTC
T ss_pred cCC
Confidence 984
No 6
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=96.00 E-value=0.014 Score=45.79 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=39.0
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++.+.+-+ .+...+-+.+||.++||.|...+++.+.+...|
T Consensus 117 ~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g 163 (493)
T 4hvm_A 117 ERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYG 163 (493)
T ss_dssp TTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCC
Confidence 346889988887 666899999999999999999999999987655
No 7
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=95.99 E-value=0.0092 Score=45.50 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=39.1
Q ss_pred CCCCeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 81 LGCPLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 81 ~~~pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
...|++.+.+.+ .++..+.+.+||.++||.|...|++.|.+..+
T Consensus 100 ~~~pl~r~~l~~~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 100 QSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp TTTCSEEEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEecCCCeEEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 457899988888 78899999999999999999999999988754
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=95.81 E-value=0.023 Score=44.91 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=39.1
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhcC
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRWH 125 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~rg 125 (126)
...|++.+.+-+ .+...+-+++||.++||.|...|++.+.+..++
T Consensus 197 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~ 243 (520)
T 2jgp_A 197 EVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQG 243 (520)
T ss_dssp TSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTT
T ss_pred CCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHcc
Confidence 347888888877 677899999999999999999999999987664
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=95.68 E-value=0.02 Score=43.95 Aligned_cols=44 Identities=20% Similarity=0.355 Sum_probs=37.9
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
...|++.+.+-+ .+...+-+.+||.++||.|...|++.+.+..+
T Consensus 101 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~ 146 (436)
T 1l5a_A 101 IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (436)
T ss_dssp BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHH
Confidence 346888888876 67899999999999999999999999987654
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=94.25 E-value=0.081 Score=40.85 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=35.1
Q ss_pred CCCCeeEEeEEe-cCeEEEEecccccccchhHHHHHHHHHHHHh
Q 047129 81 LGCPLLLIQVTR-CGGFILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 81 ~~~pll~vQvT~-cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
...|++.+.+.+ .++-.|-+.+||.++||.|...|++.+.+..
T Consensus 123 ~~~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y 166 (466)
T 2xhg_A 123 QEGPLVKVALFQTLHGDHLFLAIHHLVVDGISWRILFEDLATGY 166 (466)
T ss_dssp TTCCCEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEEcCCCCEEEEEeeeeeechhhHHHHHHHHHHHH
Confidence 346889888877 4444477999999999999999999888764
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=92.50 E-value=0.18 Score=44.58 Aligned_cols=44 Identities=7% Similarity=-0.004 Sum_probs=38.0
Q ss_pred CCCCeeEEeEEe--cCeEEEEecccccccchhHHHHHHHHHHHHhc
Q 047129 81 LGCPLLLIQVTR--CGGFILALRFNHTMCDAIGLVQFLKTIEERRW 124 (126)
Q Consensus 81 ~~~pll~vQvT~--cGG~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~r 124 (126)
...|++.+.+-+ .+...+-+++||.++||.|...+++.+.+..+
T Consensus 122 ~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~ 167 (1304)
T 2vsq_A 122 TRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYN 167 (1304)
T ss_dssp TTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHH
Confidence 346899998887 67889999999999999999999999987643
No 12
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=92.44 E-value=0.11 Score=37.38 Aligned_cols=28 Identities=21% Similarity=0.609 Sum_probs=25.3
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.++||.-+.+|++.+.+..
T Consensus 181 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 208 (213)
T 3cla_A 181 LPLSVQVHHAVCDGFHVARFINRLQELC 208 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcccccChHHHHHHHHHHHHHH
Confidence 6788999999999999999999998764
No 13
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=92.18 E-value=0.12 Score=37.30 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=24.7
Q ss_pred EEEEecccccccchhHHHHHHHHHHHH
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEER 122 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~ 122 (126)
+-|.++++|.++||.-+.+|++.+.+.
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~ 215 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDF 215 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHH
Confidence 678899999999999999999999875
No 14
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=92.10 E-value=0.12 Score=37.22 Aligned_cols=28 Identities=21% Similarity=0.525 Sum_probs=25.2
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.+.+..
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 212 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYC 212 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHH
Confidence 6788999999999999999999998753
No 15
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=91.89 E-value=0.15 Score=37.25 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=25.6
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.+.+..
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~l 231 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYL 231 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHH
Confidence 7789999999999999999999998764
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=91.50 E-value=0.13 Score=37.25 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=25.4
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-+.++++|.+.||.-+.+|++.+.+..
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~l 214 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVI 214 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHH
Confidence 5588999999999999999999998864
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=91.46 E-value=0.16 Score=37.24 Aligned_cols=28 Identities=14% Similarity=0.316 Sum_probs=25.5
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~l 235 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLL 235 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=91.46 E-value=0.16 Score=36.99 Aligned_cols=28 Identities=39% Similarity=0.529 Sum_probs=25.4
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-+.++++|.+.||.-+.+|++.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~l 223 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELL 223 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHH
Confidence 6689999999999999999999998764
No 19
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=90.95 E-value=0.19 Score=37.32 Aligned_cols=28 Identities=11% Similarity=0.163 Sum_probs=25.4
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~L 251 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYL 251 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHH
Confidence 5688999999999999999999998764
No 20
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=90.41 E-value=0.23 Score=36.80 Aligned_cols=28 Identities=25% Similarity=0.392 Sum_probs=25.3
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.|.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~L 237 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANV 237 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHH
Confidence 4589999999999999999999998764
No 21
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=90.19 E-value=0.24 Score=36.50 Aligned_cols=28 Identities=21% Similarity=0.417 Sum_probs=25.3
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.|.+..
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~L 232 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLI 232 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHH
Confidence 4688999999999999999999998764
No 22
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=80.15 E-value=0.35 Score=38.32 Aligned_cols=28 Identities=29% Similarity=0.403 Sum_probs=0.0
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.+.||.-+.+|++.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~L 418 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLL 418 (428)
T ss_dssp ----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHH
Confidence 4589999999999999999999988754
No 23
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=70.18 E-value=3.3 Score=36.61 Aligned_cols=28 Identities=21% Similarity=0.363 Sum_probs=25.2
Q ss_pred EEEEecccccccchhHHHHHHHHHHHHh
Q 047129 96 FILALRFNHTMCDAIGLVQFLKTIEERR 123 (126)
Q Consensus 96 ~~lg~~~~H~v~Dg~~~~~Fl~~WA~~~ 123 (126)
+-|.++++|.|.||.-+.+|++.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~L 219 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLL 219 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHT
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHH
Confidence 6788999999999999999999988754
No 24
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=62.86 E-value=4.7 Score=32.51 Aligned_cols=27 Identities=22% Similarity=0.342 Sum_probs=22.7
Q ss_pred eEEEEecccccccchhHHHHHHHHHHH
Q 047129 95 GFILALRFNHTMCDAIGLVQFLKTIEE 121 (126)
Q Consensus 95 G~~lg~~~~H~v~Dg~~~~~Fl~~WA~ 121 (126)
-.-|-+.++|.++||.|...|+++.=+
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~ 203 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFR 203 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHH
Confidence 367788999999999999999887644
No 25
>2bzv_A Fiber protein 2; receptor, viral protein; 1.15A {Human adenovirus type 41} PDB: 2bzu_A
Probab=32.06 E-value=31 Score=24.08 Aligned_cols=18 Identities=22% Similarity=0.322 Sum_probs=14.7
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 37 KLtL~LTKcGs~VlGtVs 54 (181)
T 2bzv_A 37 NLFLCLTKNGAHVLGTIT 54 (181)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEecCCEEEEEEE
Confidence 577888899999999643
No 26
>1h7z_A Adenovirus fibre protein; cell receptor recognition, receptor; 1.6A {Human adenovirus type 3} SCOP: b.21.1.1
Probab=30.51 E-value=31 Score=24.36 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=14.7
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 30 KLtL~LTK~Gs~Vlgtvs 47 (194)
T 1h7z_A 30 KLTLILVKNGGIVNGYVT 47 (194)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEeeCCEEEEEEE
Confidence 577888899999999754
No 27
>1qhv_A Protein (adenovirus fibre); receptor binding, extra-ordinary stability, viral protein; 1.51A {Human adenovirus 2} SCOP: b.21.1.1
Probab=29.48 E-value=33 Score=24.23 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=14.6
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 33 KLtL~LTKcGs~Vlgtvs 50 (195)
T 1qhv_A 33 KFTLVLTKCGSQVLATVA 50 (195)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeeCCEEEEEEE
Confidence 577888899999998653
No 28
>2j2j_A Fiber protein; CAR, KNOB, head, fiber fibre, coxsackievirus, adenovirus receptor, viral protein; 1.5A {Canine adenovirus 2} SCOP: b.21.1.1 PDB: 2j1k_C 2w9l_C* 2wbv_A*
Probab=28.73 E-value=36 Score=24.08 Aligned_cols=17 Identities=18% Similarity=0.135 Sum_probs=13.5
Q ss_pred eeEEeEEecCeEEEEec
Q 047129 85 LLLIQVTRCGGFILALR 101 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~ 101 (126)
-|.+-+|+|||.++|.-
T Consensus 39 KLtL~LTKcGs~Vlgtv 55 (197)
T 2j2j_A 39 RCFICLTRDSNLVTVNA 55 (197)
T ss_dssp EEEEEEEECSSEEEEEE
T ss_pred EEEEEEEecCCEEEEEE
Confidence 46777888999999864
No 29
>1knb_A Adenovirus type 5 fiber protein; cell receptor recognition; 1.70A {Human adenovirus 5} SCOP: b.21.1.1
Probab=28.53 E-value=35 Score=24.11 Aligned_cols=18 Identities=39% Similarity=0.540 Sum_probs=14.6
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 35 KLtL~LTKcGs~Vlgtvs 52 (196)
T 1knb_A 35 KLTLVLTKCGSQILATVS 52 (196)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeeCCEEEEEEE
Confidence 477888889999998653
No 30
>1kac_A Protein (fiber KNOB protein); adhesion protein receptor complex, viral protein/receptor complex; 2.60A {Human adenovirus 12} SCOP: b.21.1.1 PDB: 1nob_A 1p6a_A 1p69_A
Probab=28.38 E-value=36 Score=23.85 Aligned_cols=18 Identities=17% Similarity=0.239 Sum_probs=14.6
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 27 KLtL~LTK~Gs~Vlgtvs 44 (185)
T 1kac_A 27 KLTLCLTKNGSIVNGIVS 44 (185)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeeCCEEEEEEE
Confidence 477888889999999653
No 31
>1uxa_A Fiber protein; viral protein, fibre, receptor, sialic acid, neuraminic acid, CD46, DAF, conjunctivitis; HET: SIA GAL; 1.5A {Human adenovirus type 37} SCOP: b.21.1.1 PDB: 1uxe_A 2j12_A 2wbw_A* 2wgt_A* 2wgu_A* 3n0i_A* 3qnd_A* 1uxb_A*
Probab=28.15 E-value=36 Score=24.01 Aligned_cols=17 Identities=41% Similarity=0.593 Sum_probs=14.1
Q ss_pred eeEEeEEecCeEEEEec
Q 047129 85 LLLIQVTRCGGFILALR 101 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~ 101 (126)
-|.+-+|+|||.++|.-
T Consensus 34 KLtL~LTKcGs~Vlgtv 50 (194)
T 1uxa_A 34 KLTLVLTKCGSQILANV 50 (194)
T ss_dssp EEEEEEEEETTEEEEEE
T ss_pred EEEEEEEeeCCEEEEEE
Confidence 47788888999999864
No 32
>2qlk_A Fiber, PIV; fibre, CD46-bindning, viral protein; 2.02A {Human adenovirus 35} PDB: 3bq4_A 3l88_A 3l89_A*
Probab=26.98 E-value=39 Score=24.23 Aligned_cols=18 Identities=17% Similarity=0.290 Sum_probs=14.6
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 46 KLtL~LTKcGs~VlgtvS 63 (213)
T 2qlk_A 46 KLTLVLVKNGGLVNGYVS 63 (213)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeeCCEEEEEEE
Confidence 577888889999998654
No 33
>3exv_A Fiber protein, PIV; fiber KNOB, attachment protein, trimer, CD46, MCP, viral protein; 1.45A {Human adenovirus B} PDB: 3o8e_A* 3exw_A 2o39_A* 3f0y_A
Probab=26.97 E-value=39 Score=24.23 Aligned_cols=19 Identities=16% Similarity=0.487 Sum_probs=14.8
Q ss_pred eeEEeEEecCeEEEEeccc
Q 047129 85 LLLIQVTRCGGFILALRFN 103 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~~ 103 (126)
-|.+-+|+|||.++|...-
T Consensus 45 KLtL~LTKcGs~VlgtvSl 63 (213)
T 3exv_A 45 KLILTLVKTGALVTAFVYV 63 (213)
T ss_dssp EEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEeeCCEEEEEEEE
Confidence 4677788899999997543
No 34
>3cnc_A Fiber protein; adenovirus fiber KNOB, viral protein; 2.40A {Human adenovirus 16}
Probab=26.18 E-value=41 Score=24.24 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=14.7
Q ss_pred eeEEeEEecCeEEEEecc
Q 047129 85 LLLIQVTRCGGFILALRF 102 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~~ 102 (126)
-|.+-+|+|||.++|.-.
T Consensus 52 KLtL~LTKcGs~VlgtvS 69 (220)
T 3cnc_A 52 KLTLVLVKNGGLINGYIT 69 (220)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEeeCCEEEEEEE
Confidence 577888999999998653
No 35
>2wst_A Putative fiber protein; viral protein; 3.20A {Porcine adenovirus 4}
Probab=25.45 E-value=43 Score=23.90 Aligned_cols=17 Identities=24% Similarity=0.518 Sum_probs=13.9
Q ss_pred eeEEeEEecCeEEEEec
Q 047129 85 LLLIQVTRCGGFILALR 101 (126)
Q Consensus 85 ll~vQvT~cGG~~lg~~ 101 (126)
-|.+-+|+|||.++|.-
T Consensus 59 KLtL~LTKcGs~Vlgtv 75 (208)
T 2wst_A 59 ILRLCLSRTGGTVIGTL 75 (208)
T ss_dssp EEEEEEEEETTEEEEEE
T ss_pred EEEEEEEeeCCEEEEEE
Confidence 57788888999999864
Done!