BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047131
(889 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 322/820 (39%), Positives = 460/820 (56%), Gaps = 93/820 (11%)
Query: 102 YEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWVQPLAIDAQK 160
Y+A+F+ S FG G +++ Q E YLK ++L+ + G ++ C+SWV
Sbjct: 95 YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 161 RVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPE 220
R+FF N +YLPS+TP L + R+EEL ++RG G GER+ +DRIYDYDVYNDLGDPD E
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKG-E 213
Query: 221 LHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDPESETRSDSN 280
+ ++ S L + +K DP SE D
Sbjct: 214 KYARPVLGGSALPYPRRGRTGRGKTRK----------------------DPNSEKPGDFV 251
Query: 281 YVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGENK-DLGFPYFTAIDTLFNQGIA 339
Y+PRDEAF +K + F A + S+ ++P + AF N L F F + L+ G+
Sbjct: 252 YLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVT 311
Query: 340 LPPQEQEEFWGRNLPELIQL----AKHILKF---ATMERHQFFWFRDEEFGRQTLAGLNP 392
LP +P + +L + LK+ M+ + W DEEF R+T+AGLNP
Sbjct: 312 LPTNFLSNI--TPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNP 369
Query: 393 CAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLL 452
I+++ ++PL S LD YG IT E +E +GG +TV +AI+ KKLFILD++D L
Sbjct: 370 NVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGG-LTVEQAIQNKKLFILDHHDYL 428
Query: 453 LPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQPQW--KQAFQPSWQS 510
+PY+ K+ T Y +RT+FFL ++GTL PL IEL++P G+ + + PS +
Sbjct: 429 IPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEG 487
Query: 511 TESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTH 570
E+++W LAKA+V+ +D+ YHQ++SHW L TH
Sbjct: 488 VEAYIWLLAKAYVVVNDACYHQIISHW-----------------------------LNTH 518
Query: 571 ACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA--------------- 615
A EP+V AT RHLS +HPI LL PH R TM N+LAR+SL+NA
Sbjct: 519 AVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSL 578
Query: 616 ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKK 675
E+S+ +Y W F +ALP DL+KRG+AV DP+AP+G++L IEDYPYA+DGL +W A+K
Sbjct: 579 EMSAVIYKD-WVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKS 637
Query: 676 WVTDS-----NHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTI 730
WV + D+ L Q D ELQAWW E+ VGH D KD+PWW ++T E+L+E T+
Sbjct: 638 WVEEYVSFYYKSDEEL-QKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATL 696
Query: 731 VWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFP 790
+W+AS HAAVNFGQY Y G + NRP+I+R MP E+ E D +NP+ L++
Sbjct: 697 IWIASALHAAVNFGQYPYGGLILNRPTISRRFMP-EKGSPEYDA--LAKNPEKEFLKTIT 753
Query: 791 TQLQAIQVMAVLDVLSTHSPDEEYLGNQ-MEPTWGKDPTIFAAFERFSGRMMELEGIIDE 849
+ + + + ++++LS H+ DE YLG + W D AF+RF + E+E + E
Sbjct: 754 GKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIE 813
Query: 850 RNADMKLKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
+N D L+NR G +PY LL P S G+T +G+P SISI
Sbjct: 814 KNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 551 bits (1420), Expect = e-157, Method: Compositional matrix adjust.
Identities = 322/815 (39%), Positives = 448/815 (54%), Gaps = 92/815 (11%)
Query: 106 FEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWVQPLAIDAQKRVFF 164
FE +SFG G +++ E +L V L+ + G + C+SWV + R+FF
Sbjct: 111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFF 170
Query: 165 TNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPELHDL 224
N +YLPS TP L + R EE LRG G G+R+ +DRIYDYDVYNDLG+PD
Sbjct: 171 VNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGG------ 224
Query: 225 CLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDPESETRSDSNYVPR 284
D + + PY L TDP SE + YVPR
Sbjct: 225 ---------------DPRPILGGCSIYPYPLRVRTG---RERTRTDPNSE-KPGEVYVPR 265
Query: 285 DEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGENKDLG--FPYFTAIDTLFNQGIALPP 342
DE F +K + F + SL H +IP K+A + + F F + +L+ GI LP
Sbjct: 266 DENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPT 325
Query: 343 QEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFGRQTLAGLNPCAI 395
+ LP L ++ +++L+F + + DEEF R+ +AG+NP I
Sbjct: 326 DILSQI--SPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVI 383
Query: 396 QLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLLLPY 455
+ + ++P +STLDP +YG S IT E++E MGG +TV EA+ ++LFILDY D +PY
Sbjct: 384 RRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPY 442
Query: 456 VEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQPQWKQAFQ--PSWQSTES 513
+ ++ L Y +RT+ FL +GTL+PL IEL++P +G ++ P+ + +S
Sbjct: 443 LTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDS 502
Query: 514 WLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACT 573
+W LAKAHV+ +DSGYHQLVSHW L THA
Sbjct: 503 TIWLLAKAHVIVNDSGYHQLVSHW-----------------------------LNTHAVM 533
Query: 574 EPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA---------------ELS 618
EP+ AT RHLS +HPI LL PH R T+ N LAR+SLINA E+S
Sbjct: 534 EPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMS 593
Query: 619 SAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVT 678
S+VY W F ++ALP DL+KRG+A++DP+AP+GL+L IEDYPYA DGL +W A+K WV
Sbjct: 594 SSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVH 652
Query: 679 DSNH----DQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVWVA 734
+ + VQ D ELQAWW E GH D K++PWWP +T+EDLI+ + IVW A
Sbjct: 653 EYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTA 712
Query: 735 SGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQ 794
S HAAVNFGQY Y G + NRP++AR +P E +M ++NPQ LR+ + +
Sbjct: 713 SALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEM---VKNPQKAYLRTITPKFE 769
Query: 795 AIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADM 854
+ ++V+++LS H+ DE YLG + P W D AF+RF ++ +EG I+ RN+D
Sbjct: 770 TLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDP 829
Query: 855 KLKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
L+NR G +PY LL S G+T KG+P SISI
Sbjct: 830 SLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 318/819 (38%), Positives = 458/819 (55%), Gaps = 91/819 (11%)
Query: 102 YEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWVQPLAIDAQK 160
++ FE G G +++ Q E +L + L+ + G ++ C+SW+ +
Sbjct: 99 FKINFEWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSD 158
Query: 161 RVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPE 220
R+FF N++YLPS+TP L + R+EEL +LRG G GER+ ++RIYDYDVYNDLGDPD E
Sbjct: 159 RIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKG-E 217
Query: 221 LHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDPESETRSDSN 280
H + +LG + + + +P + DP SE+RS+
Sbjct: 218 NH-------ARPVLGGNDTFPYPRRGRTGRKPTR--------------KDPNSESRSNDV 256
Query: 281 YVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGEN-KDLGFPYFTAIDTLFNQGIA 339
Y+PRDEAF +K + F L S+ ++P +++AF N F F + L++ GI
Sbjct: 257 YLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFDEVHGLYSGGIK 316
Query: 340 LPPQEQEEFWGRNLPELIQL----AKHILKF---ATMERHQFFWFRDEEFGRQTLAGLNP 392
LP + LP L ++ + LKF ++ + W DEEF R+ LAG+NP
Sbjct: 317 LPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNP 374
Query: 393 CAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLL 452
I+ + +P S LD +YG S IT E +E + G +TV EAI+ K+LF+LD++D +
Sbjct: 375 NLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVDEAIQNKRLFLLDHHDPI 433
Query: 453 LPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQPQ--WKQAFQPSWQS 510
+PY+ ++ T Y +RT+ FL ++GTLRPL IEL+ P G + Q F P+ +
Sbjct: 434 MPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEG 492
Query: 511 TESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTH 570
ES +W LAKA+V+ +DS YHQLVSHW L TH
Sbjct: 493 VESSIWLLAKAYVVVNDSCYHQLVSHW-----------------------------LNTH 523
Query: 571 ACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLIN---------------A 615
A EP++ AT RHLS +HPI LL PH R TM N LAR SL+N
Sbjct: 524 AVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSV 583
Query: 616 ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKK 675
E+S+ VY W F +ALP DLIKRGMA++DP+ P+G++L IEDYPY DGL +W A+K
Sbjct: 584 EMSAVVYKD-WVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKT 642
Query: 676 WVTDS-----NHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTI 730
WV + D +L + D ELQA W E+ VGH DKK+EPWWP ++T E+L+E I
Sbjct: 643 WVHEYVFLYYKSDDTL-REDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAII 701
Query: 731 VWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFP 790
+W AS HAAVNFGQY Y G + NRP+++R MP + ++++ +NPQ L++
Sbjct: 702 IWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELR---KNPQKAYLKTIT 758
Query: 791 TQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDER 850
+ Q + ++V+++LS H+ DE YLG + P W D AF+RF ++ ++E + ER
Sbjct: 759 PKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSER 818
Query: 851 NADMKLKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
N D KL+NR G +PY LL P S G+T +G+P SISI
Sbjct: 819 NNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 547 bits (1410), Expect = e-156, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGILET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 547 bits (1410), Expect = e-156, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 547 bits (1409), Expect = e-155, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIVET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 547 bits (1409), Expect = e-155, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 547 bits (1409), Expect = e-155, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust.
Identities = 326/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIGET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 545 bits (1405), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFG+Y Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 545 bits (1405), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YH+L+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHELMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 545 bits (1404), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/830 (39%), Positives = 454/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAV+FGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 545 bits (1403), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/830 (39%), Positives = 453/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFG Y Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/830 (39%), Positives = 453/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTII--PLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YHQL+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAV FGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/830 (39%), Positives = 453/830 (54%), Gaps = 99/830 (11%)
Query: 93 AGVDLFNIRYEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWV 151
AG FNI +E + S G G +++ Q E +LK + L+ + G + C+SWV
Sbjct: 76 AGESAFNIHFEWD----GSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV 131
Query: 152 QPLAIDAQKRVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYND 211
+ R+FF N +Y+PS+TP L R+EEL SLRG+G GER+ YDRIYDYDVYND
Sbjct: 132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYND 191
Query: 212 LGDPDNNPELHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDP 271
LG+PD + +L L ST PY + TDP
Sbjct: 192 LGNPDKSEKLARPVLGGSSTF-------------------PYPRRGRTGRGPTV---TDP 229
Query: 272 ESETRSDSNYVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFG-ENKDLGFPYFTAI 330
+E + + YVPRDE +K SL + PA ++AF ++ + F F +
Sbjct: 230 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDV 289
Query: 331 DTLFNQGIALPPQEQEEFWGRNLPELIQL----AKHILKFA---TMERHQFFWFRDEEFG 383
L+ GI LP LP + +L +HILKF ++ Q W DEEF
Sbjct: 290 HDLYEGGIKLPRDVISTIIP--LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFA 347
Query: 384 RQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKL 443
R+ +AG+NPC I+ + ++P +S LDPAIYG S IT + ++ L G T+ EA+ ++L
Sbjct: 348 REMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD-LDG--YTMDEALGSRRL 404
Query: 444 FILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNG--QPQWK 501
F+LDY+D+ +PYV ++ QL Y +RT+ FL +GTL+P+ IEL+ P G
Sbjct: 405 FMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVS 464
Query: 502 QAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNC 561
Q P+ + ES +W LAKA+V+ +DS YH L+SHW
Sbjct: 465 QVVLPAKEGVESTIWLLAKAYVIVNDSCYHALMSHW------------------------ 500
Query: 562 IHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA------ 615
L THA EP+V AT RHLS +HPI LL PH R M N LAR+SLINA
Sbjct: 501 -----LNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIET 555
Query: 616 ---------ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDG 666
E+SSAVY W F +ALP DLIKRG+A+ DP+ P+G++L IEDYPYA DG
Sbjct: 556 TFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADG 614
Query: 667 LNLWFALKKWVTD------SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTS 720
L +W A+K WV + + D V++D ELQ WW E GH D KD+PWWP L+T
Sbjct: 615 LEIWAAIKTWVQEYVPLYYARDDD--VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672
Query: 721 EDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLEN 780
EDL+E+ I+W+AS HAAVNFGQY Y G + NRP+ +R +P + ++M + N
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEM---INN 729
Query: 781 PQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRM 840
+ LR+ ++L + ++V+++LSTH+ DE YLG + P W D AF++F ++
Sbjct: 730 HEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKL 789
Query: 841 MELEGIIDERNADMKLK-NRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
E+E + RN D L+ NR G +PY LL P S G+T +G+P SISI
Sbjct: 790 KEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 543 bits (1399), Expect = e-154, Method: Compositional matrix adjust.
Identities = 316/819 (38%), Positives = 456/819 (55%), Gaps = 91/819 (11%)
Query: 102 YEAEFEVPSSFGDVGGILVQHENQKEMYLKDVVLDGFLD-GPMNITCDSWVQPLAIDAQK 160
++ FE G G +++ Q E +L + L+ + G ++ C+SW+ +
Sbjct: 99 FKINFEWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSD 158
Query: 161 RVFFTNKSYLPSQTPNGLTRLRDEELISLRGSGQGERQPYDRIYDYDVYNDLGDPDNNPE 220
R+FF N++YLPS+TP L + R+EEL +LRG G GER+ ++RIYDYDVYNDLGDPD E
Sbjct: 159 RIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKG-E 217
Query: 221 LHDLCLVAKSTLILGVAEQDALTVQQKIWLEPYKLEEHLPDLINLYYCTDPESETRSDSN 280
H + +LG + + + +P + DP SE+RS+
Sbjct: 218 NH-------ARPVLGGNDTFPYPRRGRTGRKPTR--------------KDPNSESRSNDV 256
Query: 281 YVPRDEAFSRIKQATFSAKTLYSLLHGLIPAIKAAFGEN-KDLGFPYFTAIDTLFNQGIA 339
Y+PRDEAF +K + F L S+ ++P +++AF N F F + L++ GI
Sbjct: 257 YLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFDEVHGLYSGGIK 316
Query: 340 LPPQEQEEFWGRNLPELIQL----AKHILKF---ATMERHQFFWFRDEEFGRQTLAGLNP 392
LP + LP L ++ + LKF ++ + W DEEF R+ LAG+NP
Sbjct: 317 LPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNP 374
Query: 393 CAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVAEAIEQKKLFILDYNDLL 452
I+ + +P S LD +YG S IT E +E + G +TV EAI+ K+LF+LD++D +
Sbjct: 375 NLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEG-LTVDEAIQNKRLFLLDHHDPI 433
Query: 453 LPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMNGQPQ--WKQAFQPSWQS 510
+PY+ ++ T Y +RT+ FL ++GTLRPL IEL+ P G + Q F P+ +
Sbjct: 434 MPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEG 492
Query: 511 TESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKKDYLTNCIHIGRLRTH 570
ES +W LAKA+V+ +DS YHQLVSH L TH
Sbjct: 493 VESSIWLLAKAYVVVNDSCYHQLVSH-----------------------------XLNTH 523
Query: 571 ACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLIN---------------A 615
A EP++ AT RHLS +HPI LL PH R TM N LAR S +N
Sbjct: 524 AVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSV 583
Query: 616 ELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKK 675
E+S+ VY W F +ALP DLIKRGMA++DP+ P+G++L IEDYPY DGL +W A+K
Sbjct: 584 EMSAVVYKD-WVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKT 642
Query: 676 WVTDS-----NHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDLIEIITTI 730
WV + D +L + D ELQA W E+ VGH DKK+EPWWP ++T E+L+E I
Sbjct: 643 WVHEYVFLYYKSDDTL-REDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAII 701
Query: 731 VWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFP 790
+W AS HAAVNFGQY Y G + NRP+++R MP + ++++ +NPQ L++
Sbjct: 702 IWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELR---KNPQKAYLKTIT 758
Query: 791 TQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDER 850
+ Q + ++V+++LS H+ DE YLG + P W D AF+RF ++ ++E + ER
Sbjct: 759 PKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSER 818
Query: 851 NADMKLKNRNGARVVPYELLKPFSGRGVTEKGVPYSISI 889
N D KL+NR G +PY LL P S G+T +G+P SISI
Sbjct: 819 NNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 233/542 (42%), Gaps = 120/542 (22%)
Query: 375 FWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITV 434
+W D FG Q L G NP I+ K P + E VEKL+ T+
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 435 AEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRT----LFFLTSEGTLRPLVIELT 490
+A+++ +FI DY L E + ++ R T LF+L + + P+ I+L
Sbjct: 298 EKAMKEGLIFITDYKIL-----EGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLY 352
Query: 491 RPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLR 550
+ P W + TE W W +AK + D+ YHQ+++H
Sbjct: 353 QQPGENNSIWTPL-----KDTE-WDWIMAKLWLRCADTQYHQMITH-------------- 392
Query: 551 HLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARE 610
LR H EP ++ R+L ++HP+ LL PH + M NTL R
Sbjct: 393 ---------------LLRCHLMMEPTAVSSWRNLPSVHPVWKLLYPHTKGIMAINTLGRN 437
Query: 611 SLI------NAELSSAVYDQL------WR---FDYEALPKDLIKRGMAVDDPTAPNGLKL 655
LI + LS Q+ +R FD L KDL +RG+ +GL+
Sbjct: 438 DLIPTGGAADKVLSIGGGGQVTLMQKHYRSVTFDSYDLVKDLRQRGV--------DGLR- 488
Query: 656 TIEDYPYANDGLNLWFALKKWVTD-----SNHDQSLVQSDKELQAWWTEIRTVGH---AD 707
+ Y +D L LW + ++V D N D S V+ D E+Q W ++ G+ +D
Sbjct: 489 ---KFYYKDDALLLWNVIHQFVQDIIQIYYNDDDS-VKKDNEIQDWIRDLHENGYPAGSD 544
Query: 708 KKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEE 767
D+ + + E+L+ +T +V+ S HAAVNF Q A G+ PN P++ R PTE+
Sbjct: 545 GTDKKVPKSFENREELVHFLTVVVFTCSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTEK 604
Query: 768 PISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDP 827
S V++ S + QA+ +++V++ L+T P E++LG+ + +G D
Sbjct: 605 GKSN----------HKVIMASLANKHQAVTMVSVVNALTTIYPTEKFLGDYADNLFG-DA 653
Query: 828 TIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKPFSGRGVTEKGVPYSI 887
AA +F + + I ERN M V PY L P VP SI
Sbjct: 654 AAHAAMAKFKSNLANITKQITERNQGM---------VSPYTWLIP--------GHVPNSI 696
Query: 888 SI 889
+I
Sbjct: 697 AI 698
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 228/541 (42%), Gaps = 126/541 (23%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP + P +T E V + +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 436 EAIEQKKLFILDYNDLLL------PYVEKV--------RQLEGTTLYRSR--TLFFLTSE 479
E I+ ++I+D+ L+ P +E + + E Y + LF++
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 480 GTLRPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYV 539
G L P+ I++ + P P W P ++ W+ +AK + +S +HQL +H
Sbjct: 337 GHLMPIAIQINQEPGPENPIWT----PHEENEHDWM--MAKFWLGVAESNFHQLNTH--- 387
Query: 540 VTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLR 599
LRTH TE + +T R+L++ HPI LL+PH+
Sbjct: 388 --------------------------LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIY 421
Query: 600 YTMETNTLARESLINAELSSAVYDQLWRF-------------------DYEALPKDLIKR 640
+ +T+ R+ LI S + DQ DY LP L KR
Sbjct: 422 GVLAIDTIGRKELIG---SGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH-LPNALKKR 477
Query: 641 GMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD------SNHDQSLVQSDKELQ 694
G VDDP+ G + Y +DGL LW A++ ++ + N D V+ D E+Q
Sbjct: 478 G--VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDD--VKRDNEIQ 526
Query: 695 AWWTEIRTVG---HADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGY 751
+W ++ G + +D + ++ E L E++T++V+ S HAAVNF Q + G+
Sbjct: 527 SWIYDVHKNGWRVNPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGF 586
Query: 752 VPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPD 811
PN P+I R P +K + L++ +L + P++ QA + +A + +L+ S D
Sbjct: 587 TPNAPAILR------HPPPKKKGEATLQS----ILSTLPSKSQAAKAIATVYILTKFSED 636
Query: 812 EEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLK 871
E YLGN W +D A RF ++ ++ I +RN +++ VPY L
Sbjct: 637 ERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLL 686
Query: 872 P 872
P
Sbjct: 687 P 687
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 228/541 (42%), Gaps = 126/541 (23%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP + P +T E V + +
Sbjct: 599 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 646
Query: 436 EAIEQKKLFILDYNDLLL------PYVEKV--------RQLEGTTLYRSR--TLFFLTSE 479
E I+ ++I+D+ L+ P +E + + E Y + LF++
Sbjct: 647 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 706
Query: 480 GTLRPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYV 539
G L P+ I++ + P P W P ++ W+ +AK + +S +HQL +H
Sbjct: 707 GHLMPIAIQINQEPGPENPIW----TPHEENEHDWM--MAKFWLGVAESNFHQLNTHL-- 758
Query: 540 VTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLR 599
LRTH TE + +T R+L++ HPI LL+PH+
Sbjct: 759 ---------------------------LRTHLTTESFALSTWRNLASAHPIFKLLQPHIY 791
Query: 600 YTMETNTLARESLINAELSSAVYDQLWRF-------------------DYEALPKDLIKR 640
+ +T+ R+ LI S + DQ DY LP L KR
Sbjct: 792 GVLAIDTIGRKELIG---SGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH-LPNALKKR 847
Query: 641 GMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD------SNHDQSLVQSDKELQ 694
G VDDP+ G + Y +DGL LW A++ ++ + N D V+ D E+Q
Sbjct: 848 G--VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDD--VKRDNEIQ 896
Query: 695 AWWTEIRTVG---HADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGY 751
+W ++ G + +D + ++ E L E++T++V+ S HAAVNF Q + G+
Sbjct: 897 SWIYDVHKNGWRVNPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGF 956
Query: 752 VPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPD 811
PN P+I R P +K + L++ +L + P++ QA + +A + +L+ S D
Sbjct: 957 TPNAPAILR------HPPPKKKGEATLQS----ILSTLPSKSQAAKAIATVYILTKFSED 1006
Query: 812 EEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLK 871
E YLGN W +D A RF ++ ++ I +RN +++ VPY L
Sbjct: 1007 ERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLL 1056
Query: 872 P 872
P
Sbjct: 1057 P 1057
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 228/541 (42%), Gaps = 126/541 (23%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP + P +T E V + +
Sbjct: 232 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 279
Query: 436 EAIEQKKLFILDYNDLLL------PYVEKV--------RQLEGTTLYRSR--TLFFLTSE 479
E I+ ++I+D+ L+ P +E + + E Y + LF++
Sbjct: 280 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 339
Query: 480 GTLRPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYV 539
G L P+ I++ + P P W P ++ W+ +AK + +S +HQL +H
Sbjct: 340 GHLMPIAIQINQEPGPENPIWT----PHEENEHDWM--MAKFWLGVAESNFHQLNTH--- 390
Query: 540 VTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLR 599
LRTH TE + +T R+L++ HP+ LL+PH+
Sbjct: 391 --------------------------LLRTHLTTESFALSTWRNLASAHPVFKLLQPHIY 424
Query: 600 YTMETNTLARESLINAELSSAVYDQLWRF-------------------DYEALPKDLIKR 640
+ +T+ R+ LI S + DQ DY LP L KR
Sbjct: 425 GVLAIDTIGRKELIG---SGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH-LPNALKKR 480
Query: 641 GMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD------SNHDQSLVQSDKELQ 694
G VDDP+ G + Y +DGL LW A++ ++ + N D V+ D E+Q
Sbjct: 481 G--VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDD--VKRDNEIQ 529
Query: 695 AWWTEIRTVG---HADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGY 751
+W ++ G + +D + ++ E L E++T++V+ S HAAVNF Q + G+
Sbjct: 530 SWIYDVHKNGWRVNPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGF 589
Query: 752 VPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPD 811
PN P++ R P +K + L++ +L + P++ QA + +A + +L+ S D
Sbjct: 590 TPNAPAVLR------HPPPKKKGEATLQS----ILSTLPSKSQAAKAIATVYILTKFSED 639
Query: 812 EEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLK 871
E YLGN W +D A RF ++ ++ I +RN +++ VPY L
Sbjct: 640 ERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLL 689
Query: 872 P 872
P
Sbjct: 690 P 690
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 227/541 (41%), Gaps = 126/541 (23%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP + P +T E V + +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 436 EAIEQKKLFILDYNDLLL------PYVEKV--------RQLEGTTLYRSR--TLFFLTSE 479
E I+ ++I+D+ L+ P +E + + E Y + LF++
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 480 GTLRPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYV 539
G L P+ I++ + P P W P ++ W+ +AK + +S +HQL +H
Sbjct: 337 GHLMPIAIQINQEPGPENPIWT----PHEENEHDWM--MAKFWLGVAESNFHQLNTH--- 387
Query: 540 VTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLR 599
LRTH TE + +T R+L++ HPI LL+PH+
Sbjct: 388 --------------------------LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIY 421
Query: 600 YTMETNTLARESLINAELSSAVYDQLWRF-------------------DYEALPKDLIKR 640
+ +T+ R+ L S + DQ DY LP L KR
Sbjct: 422 GVLAIDTIGRKELAG---SGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH-LPNALKKR 477
Query: 641 GMAVDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD------SNHDQSLVQSDKELQ 694
G VDDP+ G + Y +DGL LW A++ ++ + N D V+ D E+Q
Sbjct: 478 G--VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDD--VKRDNEIQ 526
Query: 695 AWWTEIRTVG---HADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGY 751
+W ++ G + +D + ++ E L E++T++V+ S HAAVNF Q + G+
Sbjct: 527 SWIYDVHKNGWRVNPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGF 586
Query: 752 VPNRPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPD 811
PN P+I R P +K + L++ +L + P++ QA + +A + +L+ S D
Sbjct: 587 TPNAPAILR------HPPPKKKGEATLQS----ILSTLPSKSQAAKAIATVYILTKFSED 636
Query: 812 EEYLGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLK 871
E YLGN W +D A RF ++ ++ I +RN +++ VPY L
Sbjct: 637 ERYLGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLL 686
Query: 872 P 872
P
Sbjct: 687 P 687
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 230/538 (42%), Gaps = 120/538 (22%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP + P +T E V + +
Sbjct: 229 WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHVNASLDRGKNLD 276
Query: 436 EAIEQKKLFILDYNDLLL------PYVEKV--------RQLEGTTLYRSR--TLFFLTSE 479
E I+ ++I+D+ L+ P +E + + E Y + LF++
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 480 GTLRPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYV 539
G L P+ I++ + P P W P ++ W+ +AK + +S +HQL +H
Sbjct: 337 GHLMPIAIQINQEPGPENPIWT----PHEENEHDWM--MAKFWLGVAESNFHQLNTH--- 387
Query: 540 VTLFQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLR 599
LRTH TE + +T R+L++ HPI LL+PH+
Sbjct: 388 --------------------------LLRTHLTTESFALSTWRNLASAHPIFKLLQPHIY 421
Query: 600 YTMETNTLARESL------INAELS----------SAVYDQLWRFDYEALPKDLIKRGMA 643
+ +T+ R+ L ++ LS + ++ DY LP L KRG
Sbjct: 422 GVLAIDTIGRKELWGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH-LPNALKKRG-- 478
Query: 644 VDDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTD------SNHDQSLVQSDKELQAWW 697
VDDP+ G + Y +DGL LW A++ ++ + N D V+ D E+Q+W
Sbjct: 479 VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDD--VKRDNEIQSWI 529
Query: 698 TEIRTVG---HADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPN 754
++ G + +D + ++ E L E++T++V+ S HAAVNF Q + G+ PN
Sbjct: 530 YDVHKNGWRVNPGHQDHGVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPN 589
Query: 755 RPSIARTNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEY 814
P+I R P +K + L++ +L + P++ QA + +A + +L+ S DE Y
Sbjct: 590 APAILR------HPPPKKKGEATLQS----ILSTLPSKSQAAKAIATVYILTKFSEDERY 639
Query: 815 LGNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKP 872
LGN W +D A RF ++ ++ I +RN +++ VPY L P
Sbjct: 640 LGNYSATAW-EDKDALDAINRFQDKLEDISKKIKQRNENLE---------VPYIYLLP 687
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 216/518 (41%), Gaps = 88/518 (16%)
Query: 370 ERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMG 429
ER W D FG Q L G NP I+ T+ P + +TTE VE +
Sbjct: 238 ERVMNHWQEDLMFGYQFLNGANPVLIRRCTELP------------EKLPVTTEMVECSLE 285
Query: 430 GDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIEL 489
+++ + ++Q +FI+D+ L K L L + + P+ I+L
Sbjct: 286 RQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQL 345
Query: 490 TRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQL 549
+ P + P F PS + W LAK V + D HQ ++H
Sbjct: 346 NQIPGDENP----IFLPS---DAKYDWLLAKIWVRSSDFHVHQTITHL------------ 386
Query: 550 RHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLAR 609
LRTH +E + A R L A+HPI LL H+R+T+ NT AR
Sbjct: 387 -----------------LRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAR 429
Query: 610 ESLI---------NAELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGL--KLTIE 658
E LI NA + R KDL + + G+ K I
Sbjct: 430 EQLICECGLFDKANATGGGGHVQMVQR-----AMKDLTYASLCFPEAIKARGMESKEDIP 484
Query: 659 DYPYANDGLNLWFALKKW---VTDSNHD-QSLVQSDKELQAWWTEIRTVGHADKKDEPWW 714
Y Y +DGL +W A++ + V D ++ +V+ D ELQ + ++ G +K +
Sbjct: 485 YYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFP 544
Query: 715 PALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDM 774
++K+ E L E +T +++ AS HAAVNFGQY +A ++PN P R PT + + +
Sbjct: 545 KSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIPNAPPTMRAPPPTAKGVVTIEQ 604
Query: 775 KFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFE 834
++ + P + ++ + + LS +E +LG E + + P + A
Sbjct: 605 ----------IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKP-VKEAMA 653
Query: 835 RFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKP 872
RF + + +I ERN +++L PY L P
Sbjct: 654 RFRKNLEAIVSVIAERNENLQL---------PYYYLSP 682
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 216/518 (41%), Gaps = 88/518 (16%)
Query: 370 ERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMG 429
ER W D FG Q L G NP I+ T+ P + +TTE VE +
Sbjct: 238 ERVMNHWQEDLMFGYQFLNGANPVLIRRCTELP------------EKLPVTTEMVECSLE 285
Query: 430 GDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIEL 489
+++ + ++Q +FI+D+ L K L L + + P+ I+L
Sbjct: 286 RQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQL 345
Query: 490 TRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQL 549
+ P + P F PS + W LAK V + D HQ ++H
Sbjct: 346 NQIPGDENP----IFLPS---DAKYDWLLAKIWVRSSDFHVHQTITHL------------ 386
Query: 550 RHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLAR 609
LRTH +E + A R L A+HPI LL H+R+T+ NT AR
Sbjct: 387 -----------------LRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAR 429
Query: 610 ESLI---------NAELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGL--KLTIE 658
E LI NA + R KDL + + G+ K I
Sbjct: 430 EQLICECGLFDKANATGGGGHVQMVQR-----AMKDLTYASLCFPEAIKARGMESKEDIP 484
Query: 659 DYPYANDGLNLWFALKKW---VTDSNHD-QSLVQSDKELQAWWTEIRTVGHADKKDEPWW 714
Y Y +DGL +W A++ + V D ++ +V+ D ELQ + ++ G +K +
Sbjct: 485 YYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFP 544
Query: 715 PALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDM 774
++K+ E L E +T +++ AS HAAVNFGQY +A ++PN P R PT + + +
Sbjct: 545 KSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIPNAPPTMRAPPPTAKGVVTIEQ 604
Query: 775 KFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFE 834
++ + P + ++ + + LS +E +LG E + + P + A
Sbjct: 605 ----------IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKP-VKEAMA 653
Query: 835 RFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKP 872
RF + + +I ERN +++L PY L P
Sbjct: 654 RFRKNLEAIVSVIAERNENLQL---------PYYYLAP 682
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 216/518 (41%), Gaps = 88/518 (16%)
Query: 370 ERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMG 429
ER W D FG Q L G NP I+ T+ P + +TTE VE +
Sbjct: 238 ERVMNHWQEDLMFGYQFLNGANPVLIRRCTELP------------EKLPVTTEMVECSLE 285
Query: 430 GDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIEL 489
+++ + ++Q +FI+D+ L K L L + + P+ I+L
Sbjct: 286 RQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQL 345
Query: 490 TRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQL 549
+ P + P F PS + W LAK V + D HQ ++H
Sbjct: 346 NQIPGDENP----IFLPS---DAKYDWLLAKIWVRSSDFHVHQTITHL------------ 386
Query: 550 RHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLAR 609
LRTH +E + A R L A+HPI LL H+R+T+ NT AR
Sbjct: 387 -----------------LRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAR 429
Query: 610 ESLI---------NAELSSAVYDQLWRFDYEALPKDLIKRGMAVDDPTAPNGL--KLTIE 658
E LI NA + R KDL + + G+ K I
Sbjct: 430 EQLICECGLFDKANATGGGGHVQMVQR-----AMKDLTYASLCFPEAIKARGMESKEDIP 484
Query: 659 DYPYANDGLNLWFALKKW---VTDSNHD-QSLVQSDKELQAWWTEIRTVGHADKKDEPWW 714
Y Y +DGL +W A++ + V D ++ +V+ D ELQ + ++ G +K +
Sbjct: 485 YYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFP 544
Query: 715 PALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDM 774
++K+ E L E +T +++ AS HAAVNFGQY +A ++PN P R PT + + +
Sbjct: 545 KSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWASWIPNAPPTMRAPPPTAKGVVTIEQ 604
Query: 775 KFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIFAAFE 834
++ + P + ++ + + LS +E +LG E + + P + A
Sbjct: 605 ----------IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKP-VKEAMA 653
Query: 835 RFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKP 872
RF + + +I ERN +++L PY L P
Sbjct: 654 RFRKNLEAIVSVIAERNENLQL---------PYYYLDP 682
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 206/532 (38%), Gaps = 112/532 (21%)
Query: 365 KFATMERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERV 424
K A E+ + W DE F Q L G NP ++ T P L S + R
Sbjct: 57 KSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVL--------PSGMEELRA 108
Query: 425 EKLMGGDITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSE--GTL 482
+ + + ++ LF D+ +LL + + G Y + L L E G L
Sbjct: 109 Q--------LEKELQNGSLFEADF--ILLDGI-PANVIRGEKQYLAAPLVMLKMEPNGKL 157
Query: 483 RPLVIELTRPPMNGQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTL 542
+P+VI++ N F PS W LAK+ V D H++ H
Sbjct: 158 QPMVIQIQP--PNPSSPTPTLFLPS---DPPLAWLLAKSWVRNSDFQLHEIQYHL----- 207
Query: 543 FQFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTM 602
L TH E AT R L +HPI L PH+RYTM
Sbjct: 208 ------------------------LNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTM 243
Query: 603 ETNTLARESLINAELSSAVYD-----------QLWR-----FDYEAL--PKDLIKRGMAV 644
E NT AR LI+ ++D QL R Y +L P DL RG+
Sbjct: 244 EINTRARTQLIS---DGGIFDKAVSTGGGGHVQLLRRAAAQLTYCSLCPPDDLADRGL-- 298
Query: 645 DDPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTDSNH----DQSLVQSDKELQAWWTEI 700
L + YA+D L LW + ++V H +V+ D ELQAW EI
Sbjct: 299 ----------LGLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREI 348
Query: 701 RTVGHADKKDEPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIAR 760
VG +D + + ++ L +T V+ + HAA+N GQ + +VPN P R
Sbjct: 349 TEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMR 408
Query: 761 TNMPTEEPISEKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQME 820
MP P +++D+ ++ S P QA MA+ LS PD LG+ E
Sbjct: 409 --MPP--PTTKEDVTM------ATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE 458
Query: 821 PTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKP 872
+ P A +F + +LE I RN + PYE LKP
Sbjct: 459 -KYFSGPKPKAVLNQFRTDLEKLEKEITARNEQLDW---------PYEYLKP 500
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 212/522 (40%), Gaps = 103/522 (19%)
Query: 370 ERHQFFWFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMG 429
ER + W D FG Q L G NP ++ + P P + + + ++L G
Sbjct: 127 ERVRDSWKEDALFGYQFLNGTNPMLLRHSVELPARLKFPPGM-----EELQAQLEKELQG 181
Query: 430 G-----DITVAEAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRP 484
G D ++ + I + + + L +P V + L +G L P
Sbjct: 182 GTLFEADFSLLDGI-KANVILSSQQYLAVPLV----------------MLKLQPDGKLLP 224
Query: 485 LVIELTRPPMNGQPQWKQAFQPSWQSTES-WLWRLAKAHVLAHDSGYHQLVSHWYVVTLF 543
+VI+L + P G P P + T+ +W LAK V + D H+L SH
Sbjct: 225 MVIQL-QLPREGSP-----LPPLFLPTDPPMVWLLAKCWVRSSDFQLHELHSHL------ 272
Query: 544 QFFLQLRHLKKKDYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTME 603
LR H E AT R L ++HPI LL PH RYTME
Sbjct: 273 -----------------------LRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTME 309
Query: 604 TNTLARESLINAELSSAVYDQLWRFDYEALPKDLIKRGMAV--------DDPTAPNGLKL 655
N AR L++ ++DQ+ +L++R A+ D A GL L
Sbjct: 310 INVRARNGLVS---DLGIFDQVVSTGGGG-HVELLRRAAALLTYSSFCPPDDLADRGL-L 364
Query: 656 TIEDYPYANDGLNLWFALKKWVTD--SNH---DQSLVQSDKELQAWWTEIRTVGHADKKD 710
+E YA D L LW + ++V S H D+S V+ D ELQAW E +G +D
Sbjct: 365 GVESSFYAQDALRLWEVISRYVEGIVSLHYKTDES-VKEDFELQAWCREFTEIGLLGAQD 423
Query: 711 EPWWPALKTSEDLIEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPIS 770
+ +L++ E L +T ++ +G H++ + GQ + +VPN P R PT + +
Sbjct: 424 RGFPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTTKDAT 483
Query: 771 EKDMKFFLENPQVVLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTWGKDPTIF 830
LE ++ + P QA M++ L P LG Q E + P
Sbjct: 484 -------LET----VMATLPNFHQASLQMSITWQLGRCQPTMVALG-QHEEEYFSGPGPK 531
Query: 831 AAFERFSGRMMELEGIIDERNADMKLKNRNGARVVPYELLKP 872
A +F + L+ I+ RNA + L PYE L+P
Sbjct: 532 AVLTKFREELAALDKDIEVRNAKLAL---------PYEYLRP 564
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 201/510 (39%), Gaps = 91/510 (17%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP ++ + P P + E ++ + ++
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM----------EELQAQLEKELKAG 271
Query: 436 EAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMN 495
E + + ++ Y ++ L + L +G L P+VI+L P +
Sbjct: 272 TLFEADFALLDNIKANVILYCQQY-------LAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 496 GQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKK 555
P F P+ +W LAK V + D H+L SH
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSH------------------- 360
Query: 556 DYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA 615
LR H E + AT R L ++HP+ L+ PHLRYT+E N AR L++
Sbjct: 361 ----------LLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVS- 409
Query: 616 ELSSAVYDQLWRFD-------YEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLN 668
++DQ+ + L R D A GL L +E YA D L
Sbjct: 410 --DFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL-LGVESSFYAQDALR 466
Query: 669 LWFALKKWVTD-----SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDL 723
LW + ++V D++ V+ D ELQ+W EI +G + + + +L++
Sbjct: 467 LWEIISRYVQGIMGLYYKTDEA-VRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQA 525
Query: 724 IEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQV 783
+T ++ +G H++++ GQ + +VPN P R PT + + LE
Sbjct: 526 CHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDAT-------LET--- 575
Query: 784 VLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTW-GKDPTIFAAFERFSGRMME 842
++ + P Q+ M+++ L P LG E + G +P A E+F +
Sbjct: 576 -VMATLPNLKQSSLQMSIVWQLGRDQPIMVPLGQHQEEYFSGPEPR--AVLEKFREELAI 632
Query: 843 LEGIIDERNADMKLKNRNGARVVPYELLKP 872
++ I+ RN + +PYE L+P
Sbjct: 633 MDKEIEVRNEKLD---------IPYEYLRP 653
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 201/510 (39%), Gaps = 91/510 (17%)
Query: 376 WFRDEEFGRQTLAGLNPCAIQLVTKWPLESTLDPAIYGPPESAITTERVEKLMGGDITVA 435
W D FG Q L G NP ++ + P P + E ++ + ++
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM----------EELQAQLEKELKAG 271
Query: 436 EAIEQKKLFILDYNDLLLPYVEKVRQLEGTTLYRSRTLFFLTSEGTLRPLVIELTRPPMN 495
E + + ++ Y ++ L + L +G L P+VI+L P +
Sbjct: 272 TLFEADFALLDNIKANVILYCQQY-------LAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 496 GQPQWKQAFQPSWQSTESWLWRLAKAHVLAHDSGYHQLVSHWYVVTLFQFFLQLRHLKKK 555
P F P+ +W LAK V + D H+L SH
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSH------------------- 360
Query: 556 DYLTNCIHIGRLRTHACTEPYVTATTRHLSAMHPICTLLKPHLRYTMETNTLARESLINA 615
LR H E + AT R L ++HP+ L+ PHLRYT+E N AR L++
Sbjct: 361 ----------LLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVS- 409
Query: 616 ELSSAVYDQLWRFD-------YEALPKDLIKRGMAVDDPTAPNGLKLTIEDYPYANDGLN 668
++DQ+ + L R D A GL L +E YA D L
Sbjct: 410 --DFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL-LGVESSFYAQDALR 466
Query: 669 LWFALKKWVTD-----SNHDQSLVQSDKELQAWWTEIRTVGHADKKDEPWWPALKTSEDL 723
LW + ++V D++ V+ D ELQ+W EI +G + + + +L++
Sbjct: 467 LWEIISRYVQGIMGLYYKTDEA-VRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQA 525
Query: 724 IEIITTIVWVASGHHAAVNFGQYAYAGYVPNRPSIARTNMPTEEPISEKDMKFFLENPQV 783
+T ++ +G H++++ GQ + +VPN P R PT + + LE
Sbjct: 526 CHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDAT-------LET--- 575
Query: 784 VLLRSFPTQLQAIQVMAVLDVLSTHSPDEEYLGNQMEPTW-GKDPTIFAAFERFSGRMME 842
++ + P Q+ M+++ L P LG E + G +P A E+F +
Sbjct: 576 -VMATLPNLHQSSLQMSIVWQLGRDQPIMVPLGQHQEEYFSGPEPR--AVLEKFREELAI 632
Query: 843 LEGIIDERNADMKLKNRNGARVVPYELLKP 872
++ I+ RN + +PYE L+P
Sbjct: 633 MDKEIEVRNEKLD---------IPYEYLRP 653
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 750 GYVPNRPSIARTNMPTEEPISEKDMKFFL-ENPQVVLLRSFPTQLQAIQVMAVLDV 804
G VP +AR N P ++ K+M+F + NP L F +L+ V ++ V
Sbjct: 13 GLVPRGSHMARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRV 68
>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker
Derived From Snake Venom
Length = 221
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 18/134 (13%)
Query: 646 DPTAPNGLKLTIEDYPYANDGLNLWFALKKWVTDSNHDQSLVQSDK--------ELQAWW 697
+PTA N LK+ E YP A W A + + S+ D ++ K A W
Sbjct: 30 NPTASNMLKM--EWYPEAAANAERW-AYRCIESHSSRDSRVIGGIKCGENIYMATYPAKW 86
Query: 698 TEIRTVGHADKKDEPWWPALKTSEDLIEIITTIVW-------VASGHHAAVNFGQYAYAG 750
T+I H + KD + S+ +I T IVW A+ + + + +
Sbjct: 87 TDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAAYCPSSKYSYFYVCQ 146
Query: 751 YVPNRPSIARTNMP 764
Y P I +T P
Sbjct: 147 YCPAGNIIGKTATP 160
>pdb|1ZCL|A Chain A, Prl-1 C104s Mutant In Complex With Sulfate
pdb|1ZCL|B Chain B, Prl-1 C104s Mutant In Complex With Sulfate
Length = 180
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 750 GYVPNRPSIARTNMPTEEPISEKDMKFFL-ENPQVVLLRSFPTQLQAIQVMAVLDV 804
G VP +AR N P ++ K+M+F + NP L F +L+ V ++ V
Sbjct: 13 GLVPRGSHMARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRV 68
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 750 GYVPNRPSIARTNMPTEEPISEKDMKFFL-ENPQVVLLRSFPTQLQAIQVMAVLDV 804
G VP +AR N P ++ K+M+F + NP L F +L+ V ++ V
Sbjct: 13 GLVPRGSHMARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRV 68
>pdb|2H2U|A Chain A, Crystal Structure Of The E130y Mutant Of Human Soluble
Calcium-Activated Nucleotidase (Scan) With Calcium Ion
pdb|2H2U|B Chain B, Crystal Structure Of The E130y Mutant Of Human Soluble
Calcium-Activated Nucleotidase (Scan) With Calcium Ion
Length = 339
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 816 GNQMEPTWGKDPTIFAAFERFSGRMMELEGIIDERNADMKLKNRN-------GARVVPYE 868
G+++ W KD + + + GR MEL +I + +R G++ VP+
Sbjct: 78 GDKVAVEWDKDHGVLESHLAYKGRGMELSDLIVFNGKLYSVDDRTGVVYQIEGSKAVPWV 137
Query: 869 LLKPFSGRGVTEKG 882
+L G G EKG
Sbjct: 138 ILS--DGDGTVEKG 149
>pdb|2RBG|A Chain A, Crystal Structure Of Hypothetical Protein(St0493) From
Sulfolobus Tokodaii
pdb|2RBG|B Chain B, Crystal Structure Of Hypothetical Protein(St0493) From
Sulfolobus Tokodaii
Length = 126
Score = 30.0 bits (66), Expect = 6.1, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 46 RTILGGTRSNNREDVTYFEKPLFLGLVCAELDSNGSEKPTINVYASVAGVDLFNIRYEAE 105
+ IL NN YF K +FL ++ S+GS+K TINV+ + +L + EA
Sbjct: 4 KNILTLISVNNDNFENYFRK-IFL-----DVRSSGSKKTTINVFTEIQYQELVTLIREAL 57
Query: 106 FEVPSSFGDVG-GILVQHENQKEMYLKDV---VLDGFLDGPMNITCD 148
E D+G + + +N+ +++LK++ +DG L + CD
Sbjct: 58 LENI----DIGYELFLWKKNEVDIFLKNLEKSEVDGLL-----VYCD 95
>pdb|3N70|A Chain A, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|B Chain B, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|C Chain C, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|D Chain D, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|E Chain E, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|F Chain F, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|G Chain G, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
pdb|3N70|H Chain H, The Crystal Structure Of The P-Loop Ntpase Domain Of The
Sigma-54 Transport Activator From E. Coli To 2.8a
Length = 145
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 208 VYNDLGDPDNNPELHDLCLVAK-STLILGVAEQDALTVQQKIWLEPYKLEEHLP 260
VY +L PDN P+L+D +A+ TL+L E LT +Q+ L + +EH P
Sbjct: 56 VYREL-TPDNAPQLNDFIALAQGGTLVLSHPEH--LTREQQYHLVQLQSQEHRP 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,501,845
Number of Sequences: 62578
Number of extensions: 1199623
Number of successful extensions: 2930
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2685
Number of HSP's gapped (non-prelim): 71
length of query: 889
length of database: 14,973,337
effective HSP length: 107
effective length of query: 782
effective length of database: 8,277,491
effective search space: 6472997962
effective search space used: 6472997962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)