Query 047136
Match_columns 142
No_of_seqs 129 out of 671
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 13:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047136.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047136hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y6ia2 a.261.1.1 (A:83-233) M 57.1 0.38 2.8E-05 34.8 -2.4 31 36-68 117-148 (151)
2 d1z3xa2 a.261.1.1 (A:88-235) G 56.8 0.31 2.2E-05 35.2 -3.0 30 36-66 117-146 (148)
3 d1unda_ a.14.1.1 (A:) Advillin 51.9 2.6 0.00019 23.4 1.2 18 60-77 1-18 (36)
4 d2bkfa1 d.15.2.2 (A:1-85) Next 44.4 11 0.0008 24.3 3.6 48 47-96 11-67 (85)
5 d1fc4a_ c.67.1.4 (A:) 2-amino- 41.1 15 0.0011 28.4 4.6 36 46-81 39-79 (401)
6 d2r85a1 c.30.1.8 (A:1-99) 5-fo 30.9 0.93 6.8E-05 30.7 -3.8 23 36-58 64-88 (99)
7 d1yu5x1 a.14.1.1 (X:10-76) Vil 30.4 8.5 0.00062 23.9 1.1 19 59-77 31-49 (67)
8 d1qzpa_ a.14.1.1 (A:) Dematin 23.6 9.4 0.00068 23.8 0.4 19 59-77 32-50 (68)
9 d2pbza1 c.30.1.8 (A:4-99) 5-fo 23.5 1.6 0.00011 29.4 -3.7 23 36-58 59-83 (96)
10 d1tjya_ c.93.1.1 (A:) AI-2 rec 23.5 39 0.0029 23.1 3.9 31 49-79 1-34 (316)
11 d2al3a1 d.15.1.2 (A:10-85) Tet 23.3 39 0.0028 21.1 3.4 37 43-81 2-38 (76)
12 d1ujsa_ a.14.1.1 (A:) Actin-bi 22.8 12 0.00088 24.4 0.8 20 59-78 46-65 (88)
13 d1yu8x1 a.14.1.1 (X:42-76) Vil 21.9 16 0.0012 19.9 1.1 17 61-77 1-17 (35)
14 d1qusa_ d.2.1.6 (A:) 36 kDa so 20.5 27 0.002 27.1 2.7 24 58-81 13-36 (322)
No 1
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=57.14 E-value=0.38 Score=34.78 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=20.6
Q ss_pred CCCCCCCeEEEEeccc-cEEeEeccCCCcHHHHH
Q 047136 36 SSVANKGHFVVYTTDN-MRFTVPLEYLSRNVFIE 68 (142)
Q Consensus 36 ~~~vpkG~~~VyVGe~-~RfvVp~~yL~hp~F~~ 68 (142)
+..+|+||+|+.-.-+ -| +=-..|+||.|.+
T Consensus 117 ~l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 117 DLSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp STTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred cCCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 5568999999864322 22 2334889999864
No 2
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=56.79 E-value=0.31 Score=35.18 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=19.8
Q ss_pred CCCCCCCeEEEEeccccEEeEeccCCCcHHH
Q 047136 36 SSVANKGHFVVYTTDNMRFTVPLEYLSRNVF 66 (142)
Q Consensus 36 ~~~vpkG~~~VyVGe~~RfvVp~~yL~hp~F 66 (142)
+..+|+||+|+. +..+-+-|=-.+|+||.|
T Consensus 117 ~l~AP~GHLP~~-~~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 117 DLSAPRGHLPLT-NQLRGVQVLNALLNHPAW 146 (148)
T ss_dssp STTSCTTCCSCC-CCTTCSHHHHHHHTCGGG
T ss_pred cCCCCCCCCCcC-CccchHHHHHHHhcCccc
Confidence 456899999974 443334444567788766
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.90 E-value=2.6 Score=23.42 Aligned_cols=18 Identities=28% Similarity=0.696 Sum_probs=16.9
Q ss_pred CCCcHHHHHHHHhhhHhc
Q 047136 60 YLSRNVFIELLRMSEEEF 77 (142)
Q Consensus 60 yL~hp~F~~LL~~aeeEf 77 (142)
||+...|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 799999999999999997
No 4
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.39 E-value=11 Score=24.32 Aligned_cols=48 Identities=13% Similarity=0.278 Sum_probs=34.0
Q ss_pred EeccccEEeEeccCCCcHHHHHHHHhhhHhcCCC--------C-CCCeeecCchHHHHH
Q 047136 47 YTTDNMRFTVPLEYLSRNVFIELLRMSEEEFGLP--------S-NGPITLPCDSTFLNY 96 (142)
Q Consensus 47 yVGe~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~--------~-~G~L~iPC~~~~Fe~ 96 (142)
|-||-+||.++.. +++.|.+|..+.+.-||.+ . +.-++|.|+.++=|-
T Consensus 11 f~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 11 FKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp ETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred ECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 4466799988533 4677899999999888853 2 334788998776443
No 5
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=41.12 E-value=15 Score=28.39 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=27.8
Q ss_pred EEeccccEEe--EeccCCC---cHHHHHHHHhhhHhcCCCC
Q 047136 46 VYTTDNMRFT--VPLEYLS---RNVFIELLRMSEEEFGLPS 81 (142)
Q Consensus 46 VyVGe~~Rfv--Vp~~yL~---hp~F~~LL~~aeeEfG~~~ 81 (142)
|++.|+++|+ ..-+||+ ||.+++....+-+.||...
T Consensus 39 v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~ 79 (401)
T d1fc4a_ 39 ITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGM 79 (401)
T ss_dssp EEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCC
T ss_pred EEecCCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCc
Confidence 4556778886 3556764 9999999999999999654
No 6
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=30.93 E-value=0.93 Score=30.72 Aligned_cols=23 Identities=26% Similarity=0.375 Sum_probs=17.7
Q ss_pred CCCCCCCeEEEEec-cc-cEEeEec
Q 047136 36 SSVANKGHFVVYTT-DN-MRFTVPL 58 (142)
Q Consensus 36 ~~~vpkG~~~VyVG-e~-~RfvVp~ 58 (142)
..-||.|.|++|+| |+ +.|.||+
T Consensus 64 ~I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 64 AVVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEEecCCCEEEEEcHHHHhcCCCCc
Confidence 55699999999999 32 3477775
No 7
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=30.39 E-value=8.5 Score=23.90 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhhhHhc
Q 047136 59 EYLSRNVFIELLRMSEEEF 77 (142)
Q Consensus 59 ~yL~hp~F~~LL~~aeeEf 77 (142)
.||++-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 5999999999999999998
No 8
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.59 E-value=9.4 Score=23.78 Aligned_cols=19 Identities=42% Similarity=0.541 Sum_probs=17.9
Q ss_pred cCCCcHHHHHHHHhhhHhc
Q 047136 59 EYLSRNVFIELLRMSEEEF 77 (142)
Q Consensus 59 ~yL~hp~F~~LL~~aeeEf 77 (142)
.||++-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 5999999999999999998
No 9
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=23.54 E-value=1.6 Score=29.40 Aligned_cols=23 Identities=22% Similarity=0.381 Sum_probs=17.4
Q ss_pred CCCCCCCeEEEEec-cc-cEEeEec
Q 047136 36 SSVANKGHFVVYTT-DN-MRFTVPL 58 (142)
Q Consensus 36 ~~~vpkG~~~VyVG-e~-~RfvVp~ 58 (142)
..-+|.|.|++|+| |+ +.+.||+
T Consensus 59 aI~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 59 GIVVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp SBCCCBTTHHHHSCHHHHHTCCSCC
T ss_pred eEEEcCCCEEEEecHHHHhhCCCCc
Confidence 66799999999999 32 4566664
No 10
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=23.48 E-value=39 Score=23.07 Aligned_cols=31 Identities=10% Similarity=0.115 Sum_probs=23.6
Q ss_pred ccccEEeEeccCCCcHHHHHHHHhhh---HhcCC
Q 047136 49 TDNMRFTVPLEYLSRNVFIELLRMSE---EEFGL 79 (142)
Q Consensus 49 Ge~~RfvVp~~yL~hp~F~~LL~~ae---eEfG~ 79 (142)
|..+|..+=+..++||.|.++.+-++ +++||
T Consensus 1 G~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~ 34 (316)
T d1tjya_ 1 GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGI 34 (316)
T ss_dssp CCCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 44567777788999999999976655 46786
No 11
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.26 E-value=39 Score=21.14 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=28.4
Q ss_pred eEEEEeccccEEeEeccCCCcHHHHHHHHhhhHhcCCCC
Q 047136 43 HFVVYTTDNMRFTVPLEYLSRNVFIELLRMSEEEFGLPS 81 (142)
Q Consensus 43 ~~~VyVGe~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~~ 81 (142)
++.|..-..+|..|++.= .-...+.|++|-+.|||+.
T Consensus 2 ~V~Vl~~~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~ 38 (76)
T d2al3a1 2 AVSVLAPNGRRHTVKVTP--STVLLQVLEDTCRRQDFNP 38 (76)
T ss_dssp CEEEECTTSCEEEECCCT--TSBHHHHHHHHHHHTTCCG
T ss_pred cEEEECCCCcEEEEEeCC--CcCHHHHHHHHHHHhCCCh
Confidence 456666678999998853 3367889999999999974
No 12
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.75 E-value=12 Score=24.40 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=18.5
Q ss_pred cCCCcHHHHHHHHhhhHhcC
Q 047136 59 EYLSRNVFIELLRMSEEEFG 78 (142)
Q Consensus 59 ~yL~hp~F~~LL~~aeeEfG 78 (142)
.||++-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 49999999999999999984
No 13
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.86 E-value=16 Score=19.86 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=14.5
Q ss_pred CCcHHHHHHHHhhhHhc
Q 047136 61 LSRNVFIELLRMSEEEF 77 (142)
Q Consensus 61 L~hp~F~~LL~~aeeEf 77 (142)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56778999999999987
No 14
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=20.54 E-value=27 Score=27.12 Aligned_cols=24 Identities=4% Similarity=0.103 Sum_probs=21.7
Q ss_pred ccCCCcHHHHHHHHhhhHhcCCCC
Q 047136 58 LEYLSRNVFIELLRMSEEEFGLPS 81 (142)
Q Consensus 58 ~~yL~hp~F~~LL~~aeeEfG~~~ 81 (142)
-+|.+||-+++++++..+++||+.
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~ 36 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDR 36 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCH
Confidence 369999999999999999999975
Done!