BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047137
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana
GN=At1g07440 PE=1 SV=1
Length = 266
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 10/93 (10%)
Query: 7 ELNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNI----------HATT 56
ELN+ + +W KG +V+GSVCD R +REKL +TVSS++ GKL+I T
Sbjct: 50 ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTL 109
Query: 57 EYTMEDFSTTMTTNFESAYHLSQFAYTLLKASG 89
+YT EDFS ++TN ESAYHLSQ A+ LLKASG
Sbjct: 110 DYTAEDFSFHISTNLESAYHLSQLAHPLLKASG 142
>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1
Length = 273
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 10/92 (10%)
Query: 7 ELNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATT---------- 56
EL++ ++ W KGL V GSVCDL SR +R+KL +TV+ V+DGKLNI
Sbjct: 57 ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAK 116
Query: 57 EYTMEDFSTTMTTNFESAYHLSQFAYTLLKAS 88
++T +D++ M TNFE+AYHLSQ AY LLKAS
Sbjct: 117 DFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS 148
>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1
Length = 260
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 10/92 (10%)
Query: 7 ELNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATT---------- 56
EL++ + +W SKG V SVCDL SR++RE+ KTVS+ + GKLNI
Sbjct: 45 ELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAK 104
Query: 57 EYTMEDFSTTMTTNFESAYHLSQFAYTLLKAS 88
+YTMED+S M+ NFE+AYHLS A+ LKAS
Sbjct: 105 DYTMEDYSHIMSINFEAAYHLSVLAHPFLKAS 136
>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1
Length = 260
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 10/92 (10%)
Query: 7 ELNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATT---------- 56
ELN + +W SKG KV SVCDL SR++R++L TV++ + GKLNI
Sbjct: 45 ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAK 104
Query: 57 EYTMEDFSTTMTTNFESAYHLSQFAYTLLKAS 88
+YT+ED+S M+ NFE+AYHLS A+ LKAS
Sbjct: 105 DYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS 136
>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1
Length = 268
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 10/94 (10%)
Query: 7 ELNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNI----------HATT 56
+L++ +++W KG KVSG VCD+ S +QR+ L ++V+S ++GKLNI T
Sbjct: 53 DLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEAT 112
Query: 57 EYTMEDFSTTMTTNFESAYHLSQFAYTLLKASGK 90
+T ED+S M TNFE++Y+L Q A+ LLKASG
Sbjct: 113 NFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGN 146
>sp|Q8FDU7|NANA2_ECOL6 N-acetylneuraminate lyase 2 OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=nanA2 PE=3 SV=1
Length = 305
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 14 EWNSKGLKVSGSVCD--LKSRAQREKLAKTVSSVYDGKLNIHA 54
E N KGL V GS + L++ A+REK+ +TV+ DG+L + A
Sbjct: 36 EQNIKGLYVGGSTGEAFLQNVAEREKILETVADESDGRLTLIA 78
>sp|P16542|DHK1_STRVN Granaticin polyketide synthase putative ketoacyl reductase 1
OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1
Length = 272
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 8 LNQRIKEWNSKGLKVSGSVCDLKSRAQ-REKLAKTVS--SVYD------GKLNIHATTEY 58
L Q +KE +G V G+VCD+ AQ R +A V D G+ AT E
Sbjct: 54 LAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRYGTVDILVNNAGRSGGGATAEI 113
Query: 59 TMEDFSTTMTTNFESAYHLSQFAYTLLKASG 89
E + +TTN S + +++ +L A G
Sbjct: 114 ADELWLDVITTNLTSVFLMTK---EVLNAGG 141
>sp|O13816|SCC3_SCHPO Cohesin subunit psc3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=psc3 PE=1 SV=3
Length = 962
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 16 NSKGLKVSGSVCDLKSRAQREK---LAKTVSSVYDGKLNIHATTEYTMEDFSTTMTTNF 71
NS+ LKV + D+ R QRE L K V + K+++ +Y ++ FS T T F
Sbjct: 410 NSEILKVLKLILDINPRVQREAVLFLCKVVDESVNEKIDLWGEEDYILKAFSQTSLTTF 468
>sp|A5N4I2|MURC_CLOK5 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium kluyveri
(strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=murC PE=3
SV=1
Length = 457
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 18 KGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATTEYTMEDFSTTMTTNFE 72
KG KVSGS D+KS E+L + VY G+++ + T++ + ++ ++ N E
Sbjct: 31 KGFKVSGS--DVKSSEATERLELKGAKVYIGQISQNITSDIDLVVYTAAISKNNE 83
>sp|B9DY44|MURC_CLOK1 UDP-N-acetylmuramate--L-alanine ligase OS=Clostridium kluyveri
(strain NBRC 12016) GN=murC PE=3 SV=1
Length = 457
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 18 KGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATTEYTMEDFSTTMTTNFE 72
KG KVSGS D+KS E+L + VY G+++ + T++ + ++ ++ N E
Sbjct: 31 KGFKVSGS--DVKSSEATERLELKGAKVYIGQISQNITSDIDLVVYTAAISKNNE 83
>sp|Q9UMN6|MLL4_HUMAN Histone-lysine N-methyltransferase MLL4 OS=Homo sapiens GN=WBP7 PE=1
SV=1
Length = 2715
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 86 KASGKWKHYICLLCRKCYSCTAKP 109
+A+ K +H+IC C +C SC A P
Sbjct: 1287 RATRKRRHWICSACVRCKSCGATP 1310
>sp|Q0HVY2|SYM_SHESR Methionine--tRNA ligase OS=Shewanella sp. (strain MR-7) GN=metG
PE=3 SV=1
Length = 676
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 1 MAALVTELNQRIKEWNSKGLKVSG-SVCDLKSRAQREKLAKTVSSVYDGKLNIHATTE 57
+A V Q+ W+S G ++G + K+ QR +L K + V D K N+ AT+E
Sbjct: 497 LALDVEAFFQQTLTWDSLGQDMAGHEIAPFKAMMQRVELDKVNAMVADSKENLQATSE 554
>sp|Q8EDX2|SYM_SHEON Methionine--tRNA ligase OS=Shewanella oneidensis (strain MR-1)
GN=metG PE=3 SV=1
Length = 676
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 1 MAALVTELNQRIKEWNSKGLKVSG-SVCDLKSRAQREKLAKTVSSVYDGKLNIHATTE 57
+A V Q+ W+ G ++G + K+ QR +L K + V D K N+ ATTE
Sbjct: 497 LAQDVEAFFQQTLTWDGLGQDMAGHEIAPFKAMMQRVELDKVNAMVADSKENLQATTE 554
>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens
GN=DHRS4 PE=1 SV=3
Length = 278
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 8 LNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATTEYTMEDFSTTM 67
++Q + +GL V+G+VC + RE+L T ++ G ++I + F + M
Sbjct: 69 VDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSIM 127
Query: 68 TTNFE 72
E
Sbjct: 128 DVTEE 132
>sp|Q98R27|SYP_MYCPU Proline--tRNA ligase OS=Mycoplasma pulmonis (strain UAB CTIP)
GN=proS PE=3 SV=2
Length = 476
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 29 LKSRAQREKLAKTVSS------VYDGKLNIHATTEYTMEDFSTTMTTNFESAYHLSQFAY 82
+ + REK + S+ + DGK TT Y ++FS NF+ + + QF Y
Sbjct: 196 MGKKTPREKFSGAYSTYTLEAMMKDGKALQSGTTHYLAQNFSEAYDVNFKDSENKKQFVY 255
>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii
GN=DHRS4 PE=2 SV=3
Length = 278
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 8 LNQRIKEWNSKGLKVSGSVCDLKSRAQREKLAKTVSSVYDGKLNIHATTEYTMEDFSTTM 67
++Q + +GL V+G+VC + RE+L T ++ G ++I + F + M
Sbjct: 69 VDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSLM 127
Query: 68 TTNFE 72
E
Sbjct: 128 DVTEE 132
>sp|Q5ADL4|SLU7_CANAL Pre-mRNA-splicing factor SLU7 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=SLU7 PE=3 SV=1
Length = 350
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 20 LKVSGSVCDLKSRA-QREKLAKTVSSVYDGKLNIHATTEYTMEDFSTTMTTNFESAYHLS 78
L+ S ++ LKS+ Q EKLAK++ S + +A+TE ++ + T + E L+
Sbjct: 261 LEASPTLMMLKSKQLQNEKLAKSIQSKQEVMEKYNASTE--SDEKESKKTGHLEDKLFLN 318
Query: 79 -QFAYTLLKASGKWKHYICLLCRKCYSCTA 107
++ Y +GKW + C K CTA
Sbjct: 319 HKYIYGSYYENGKWGYKCCKQFDKNSRCTA 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.126 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,938,543
Number of Sequences: 539616
Number of extensions: 1222358
Number of successful extensions: 3993
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3971
Number of HSP's gapped (non-prelim): 29
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)