BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047140
(313 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEF 95
GV V + ++ +VA+K + + + F E E + RH +L+ +I C
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 96 KALVLEYMPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLK 152
L+ +YM +G+L+++LY S+ + QRL I I A L YLH + +IH D+K
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVK 166
Query: 153 PINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
IN+LLD+N V ++DF I+K T Q+ T+G I PEY KGR + DVYS
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYS 226
Query: 213 FGIMLMETFTRKKPTDEIFNREM-TLKHWGNNWLPISTME-VVDANLLSQEDIHFVAKEQ 270
FG++L E + + REM L W +E +VD NL + + E
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPES 281
Query: 271 CVSFVFNLAIECTVESPEQRINAREIVAKL 300
F + A++C S E R + +++ KL
Sbjct: 282 LRKF-GDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEF 95
GV V + ++ +VA+K + + + F E E + RH +L+ +I C
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 96 KALVLEYMPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLK 152
L+ +YM +G+L+++LY S+ + QRL I I A L YLH + +IH D+K
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVK 166
Query: 153 PINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
IN+LLD+N V ++DF I+K T Q+ T+G I PEY KGR + DVYS
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYS 226
Query: 213 FGIMLMETFTRKKPTDEIFNREM-TLKHWGNNWLPISTME-VVDANLLSQEDIHFVAKEQ 270
FG++L E + + REM L W +E +VD NL + + E
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPES 281
Query: 271 CVSFVFNLAIECTVESPEQRINAREIVAKL 300
F + A++C S E R + +++ KL
Sbjct: 282 LRKF-GDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 24 TSDFQILNFFICGVIIPVAQFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRN 82
+ +F N G V + ++ VAVK + + + F E EM+ HRN
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 83 LIKVISTCSNEEFKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLH 139
L+++ C + LV YM +GS+ L S LD +R I + A L YLH
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSM-TQTQTLATIGCIAPEY 198
++IH D+K N+LLD+ A + DF +AKL+ +Y+ TIG IAPEY
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXAVRGTIGHIAPEY 214
Query: 199 RRKGRESTNGDVYSFGIMLMETFTRKKPTDEIF---NREMTLKHWGNNWLPISTME-VVD 254
G+ S DV+ +G+ML+E T ++ D + ++ L W L +E +VD
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 274
Query: 255 ANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKL 300
+L K++ V + +A+ CT SP +R E+V L
Sbjct: 275 VDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 24 TSDFQILNFFICGVIIPVAQFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRN 82
+ +F N G V + ++ VAVK + + + F E EM+ HRN
Sbjct: 29 SDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 83 LIKVISTCSNEEFKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLH 139
L+++ C + LV YM +GS+ L S LD +R I + A L YLH
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSM-TQTQTLATIGCIAPEY 198
++IH D+K N+LLD+ A + DF +AKL+ +Y+ IG IAPEY
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXAVRGXIGHIAPEY 206
Query: 199 RRKGRESTNGDVYSFGIMLMETFTRKKPTDEIF---NREMTLKHWGNNWLPISTMEVVDA 255
G+ S DV+ +G+ML+E T ++ D + ++ L W L +E
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA--- 263
Query: 256 NLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKL 300
L D+ K++ V + +A+ CT SP +R E+V L
Sbjct: 264 --LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 50 MEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLE 109
M VAVK A K F E E++ +++H +++K C + + +V EYM HG L
Sbjct: 46 MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 110 KYLYS---------------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
K+L + + L + Q L+I +AS + YL S +H DL
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATR 162
Query: 155 NVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFG 214
N L+ N++ + DF +++ + T+ I + PE + +T DV+SFG
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 222
Query: 215 IMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSF 274
++L E FT K W +S EV++ ++Q + C
Sbjct: 223 VILWEIFTYGK----------------QPWFQLSNTEVIEC--ITQGRV-LERPRVCPKE 263
Query: 275 VFNLAIECTVESPEQRINAREI 296
V+++ + C P+QR+N +EI
Sbjct: 264 VYDVMLGCWQREPQQRLNIKEI 285
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 176
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 237 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 288
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 289 NNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 51 EVAVKVFNLQCGRAFK--SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ Q A + F E +MK +RH N++ + + ++V EY+ GSL
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 109 EKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+ L+ S LD +RL++ DVA + YLH + ++H DLK N+L+D +
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKV 180
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
DF +++L + + T +APE R + DVYSFG++L E T ++P
Sbjct: 181 CDFGLSRLKASXF--LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 158
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 219 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 270
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 163
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 164 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 223
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 224 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 275
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 276 NNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 176
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 237 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 288
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 289 NNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 164
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 165 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 224
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 225 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 276
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 277 NNVNQRPSFRDLALRVDQIRDNM 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 165
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 166 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 225
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 226 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 277
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 278 NNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 162
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 163 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 222
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 223 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 274
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 275 NNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 157
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 158 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 217
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 218 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 269
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 270 NNVNQRPSFRDLALRVDQIRDNM 292
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 189
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 250 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 301
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD +
Sbjct: 302 NNVNQRPSFRDLALRVDQIRDQM 324
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 158
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 219 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 270
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL + +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 161
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 222 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 273
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 274 NNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 161
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 222 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 273
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 274 NNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 156
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 157 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 216
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 217 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 268
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD +
Sbjct: 269 NNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF +A++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 158
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 219 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 270
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 51 EVAVKVFNLQCGRAFK--SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ Q A + F E +MK +RH N++ + + ++V EY+ GSL
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 109 EKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+ L+ S LD +RL++ DVA + YLH + ++H +LK N+L+D +
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
DF +++L + ++ T +APE R + DVYSFG++L E T ++P
Sbjct: 181 CDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++E++P+GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+YL +D + L + +EYL + + IH DL N+L+++ + DF
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDF 161
Query: 170 SIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----RK 224
+ K+L + + + + I APE + + S DV+SFG++L E FT K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 222 SPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN 273
Query: 285 ESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 274 NNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK--ALVLEYMPHGSLE 109
VAVK + F E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
YL +D + L + +EYL + + IH +L N+L+++ + DF
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDF 159
Query: 170 SIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT----R 223
+ K+L EY + + + I APE + + S DV+SFG++L E FT
Sbjct: 160 GLTKVLPQDKEYYKVKEPGE-SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 218
Query: 224 KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECT 283
K P E ++ GN+ M V L + + + C ++ + EC
Sbjct: 219 KSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 270
Query: 284 VESPEQRINAREIVAKLFKIRDSL 307
+ QR + R++ ++ +IRD++
Sbjct: 271 NNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 52 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 111
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 112 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 167
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 168 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 227
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 228 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 267
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 268 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 300
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 35 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 94
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 95 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 150
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 151 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 211 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 250
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 251 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 283
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF + ++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 62 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 121
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 122 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 177
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 178 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 238 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 277
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 278 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + +V V + L+ G R + F E +M H N+I++ + +
Sbjct: 68 GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + I Q + ++ V + + YL GY +H DL NVL
Sbjct: 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVL 183
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQ-SMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
+D N+V +SDF ++++L + + T T I APE S+ DV+SFG++
Sbjct: 184 VDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
+ E ++P + NR++ IS++E E A C +
Sbjct: 244 MWEVLAYGERPYWNMTNRDV-----------ISSVE---------EGYRLPAPMGCPHAL 283
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRN 310
L ++C + QR +IV+ L D+L+R+
Sbjct: 284 HQLMLDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + +V V + L+ G R + F E +M H N+I++ + +
Sbjct: 68 GRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + I Q + ++ V + + YL GY +H DL NVL
Sbjct: 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVL 183
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
+D N+V +SDF ++++L + + T T I APE S+ DV+SFG++
Sbjct: 184 VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
+ E ++P + NR++ IS++E E A C +
Sbjct: 244 MWEVLAYGERPYWNMTNRDV-----------ISSVE---------EGYRLPAPMGCPHAL 283
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRN 310
L ++C + QR +IV+ L D+L+R+
Sbjct: 284 HQLMLDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 126/269 (46%), Gaps = 31/269 (11%)
Query: 47 SSAMEVAVKVFNLQCGRAFK---SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
S EV V + L+ G K F E +M H N+I++ S + ++ EYM
Sbjct: 69 SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+G+L+K+L + + Q + ++ +A+ ++YL + +H DL N+L++ N+V
Sbjct: 129 ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLV 185
Query: 164 AHLSDFSIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+SDF ++++L + ++ T + I APE + ++ DV+SFGI++ E T
Sbjct: 186 CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
Query: 223 -RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
++P E+ N E+ M+ ++ + C S ++ L ++
Sbjct: 246 YGERPYWELSNHEV--------------MKAIN------DGFRLPTPMDCPSAIYQLMMQ 285
Query: 282 CTVESPEQRINAREIVA---KLFKIRDSL 307
C + +R +IV+ KL + DSL
Sbjct: 286 CWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQL 106
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 107 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 163
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 164 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V+EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 106
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ +DV + YL A VIH DL N L+ +N V +SDF + + + + Q + T
Sbjct: 107 GMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSST 162
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
T + +PE R S+ DV+SFG+++ E F+ K P + N E+
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 131/277 (47%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L + + Q + ++ +AS ++YL G+ +H DL N+L
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V+EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 50 MEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLE 109
M VAVK A + F E E++ ++H+++++ C+ +V EYM HG L
Sbjct: 43 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 110 KYLYS--------------SNCILDIFQRLNIMIDVASALEY---LHFGYSAQVIHCDLK 152
++L S + L + Q L + VA+ + Y LHF +H DL
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 156
Query: 153 PINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
N L+ +V + DF +++ + +T+ I + PE + +T DV+S
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 216
Query: 213 FGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCV 272
FG++L E FT K W +S E +D +E C
Sbjct: 217 FGVVLWEIFTYGK----------------QPWYQLSNTEAIDCITQGRE---LERPRACP 257
Query: 273 SFVFNLAIECTVESPEQRINAREIVAKL 300
V+ + C P+QR + +++ A+L
Sbjct: 258 PEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 50 MEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLE 109
M VAVK A + F E E++ ++H+++++ C+ +V EYM HG L
Sbjct: 72 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 110 KYLYS--------------SNCILDIFQRLNIMIDVASALEY---LHFGYSAQVIHCDLK 152
++L S + L + Q L + VA+ + Y LHF +H DL
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 185
Query: 153 PINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
N L+ +V + DF +++ + +T+ I + PE + +T DV+S
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 245
Query: 213 FGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCV 272
FG++L E FT K W +S E +D +E C
Sbjct: 246 FGVVLWEIFTYGK----------------QPWYQLSNTEAIDCITQGRE---LERPRACP 286
Query: 273 SFVFNLAIECTVESPEQRINAREIVAKL 300
V+ + C P+QR + +++ A+L
Sbjct: 287 PEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK IRH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 50 MEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLE 109
M VAVK A + F E E++ ++H+++++ C+ +V EYM HG L
Sbjct: 49 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 110 KYLYS--------------SNCILDIFQRLNIMIDVASALEY---LHFGYSAQVIHCDLK 152
++L S + L + Q L + VA+ + Y LHF +H DL
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 162
Query: 153 PINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
N L+ +V + DF +++ + +T+ I + PE + +T DV+S
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 222
Query: 213 FGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCV 272
FG++L E FT K W +S E +D +E C
Sbjct: 223 FGVVLWEIFTYGK----------------QPWYQLSNTEAIDCITQGRE---LERPRACP 263
Query: 273 SFVFNLAIECTVESPEQRINAREIVAKL 300
V+ + C P+QR + +++ A+L
Sbjct: 264 PEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 109
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 110 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 166
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 167 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 217
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 340 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 340 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 109
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ +DV + YL A VIH DL N L+ +N V +SDF + + + + Q + T
Sbjct: 110 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSST 165
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T + +PE R S+ DV+SFG+++ E F+ K E NR
Sbjct: 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NR------------ 211
Query: 246 PISTMEVVDANLLSQEDI----HFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
S EVV EDI + V+ + C E PE R ++ +L
Sbjct: 212 --SNSEVV-------EDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262
Query: 302 KIRDSLL 308
+I +S L
Sbjct: 263 EIAESGL 269
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 171 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 106
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ +DV + YL A VIH DL N L+ +N V +SDF + + + + Q + T
Sbjct: 107 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSST 162
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T + +PE R S+ DV+SFG+++ E F+ K E NR
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NR------------ 208
Query: 246 PISTMEVVDANLLSQEDI----HFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
S EVV EDI + V+ + C E PE R ++ +L
Sbjct: 209 --SNSEVV-------EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 259
Query: 302 KIRDSLL 308
+I +S L
Sbjct: 260 EIAESGL 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 31/242 (12%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+M + H L+++ C + LV E+M HG L YL + + L + +D
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 131
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
V + YL A VIH DL N L+ +N V +SDF + + + + Q + T T
Sbjct: 132 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFP 187
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTM 250
+ +PE R S+ DV+SFG+++ E F+ K E NR S
Sbjct: 188 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NR--------------SNS 231
Query: 251 EVVDANLLSQEDI----HFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDS 306
EVV EDI + V+ + C E PE R ++ +L +I +S
Sbjct: 232 EVV-------EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
Query: 307 LL 308
L
Sbjct: 285 GL 286
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 105
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 106 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 162
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 163 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 104
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ +DV + YL A VIH DL N L+ +N V +SDF + + + + Q + T
Sbjct: 105 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSST 160
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T + +PE R S+ DV+SFG+++ E F+ K E NR
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NR------------ 206
Query: 246 PISTMEVVDANLLSQEDI----HFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
S EVV EDI + V+ + C E PE R ++ +L
Sbjct: 207 --SNSEVV-------EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 257
Query: 302 KIRDSLL 308
+I +S L
Sbjct: 258 EIAESGL 264
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 107
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 108 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 165 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 213
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 214 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 250
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 366 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 423 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 170
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 171 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 6/166 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDIFQ 123
+ F+ E ++M +H NL++++ S+ + LV YMP+GSL L L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
R I A+ + +LH + IH D+K N+LLD+ A +SDF +A+ Q++
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
++ + T +APE R G + D+YSFG++L+E T DE
Sbjct: 192 XSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V E M +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 179
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 279
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 280 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 35 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 94
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V E M +GSL+ +L + + Q + ++ +AS ++YL GY +H DL N+L
Sbjct: 95 VTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNIL 150
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+
Sbjct: 151 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
L E + ++P E+ N+++ ++ VD E C + +
Sbjct: 211 LWEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAAL 250
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
+ L ++C + R +IV+ I D L+RN G
Sbjct: 251 YQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 283
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 340 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 31/247 (12%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLL 107
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ +DV + YL A VIH DL N L+ +N V +SDF + + + + Q + T
Sbjct: 108 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSST 163
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T + +PE R S+ DV+SFG+++ E F+ K E NR
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NR------------ 209
Query: 246 PISTMEVVDANLLSQEDI----HFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
S EVV EDI + V+ + C E PE R ++ +L
Sbjct: 210 --SNSEVV-------EDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260
Query: 302 KIRDSLL 308
+I +S L
Sbjct: 261 EIAESGL 267
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDIFQ 123
+ F+ E ++M +H NL++++ S+ + LV YMP+GSL L L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
R I A+ + +LH + IH D+K N+LLD+ A +SDF +A+ Q++
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+ + T +APE R G + D+YSFG++L+E T DE
Sbjct: 192 XXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 34/257 (13%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
VAVK A K F+ E E++ +++H +++K C + +V EYM HG L K+
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 112 L--YSSNCI----------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD 159
L + + + L Q L+I +A+ + YL S +H DL N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVG 162
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+N++ + DF +++ + T+ I + PE + +T DV+S G++L E
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT K W +S EV++ ++Q + C V+ L
Sbjct: 223 IFTYGK----------------QPWYQLSNNEVIEC--ITQGRV-LQRPRTCPQEVYELM 263
Query: 280 IECTVESPEQRINAREI 296
+ C P R N + I
Sbjct: 264 LGCWQREPHMRKNIKGI 280
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V+EYM G L +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 123
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K S T
Sbjct: 104 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 155
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
Q + APE R+ + ST DV+SFGI+L E ++
Sbjct: 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 123
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K S T
Sbjct: 119 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 170
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
Q + APE R+ + ST DV+SFGI+L E ++
Sbjct: 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
F E ++K H N++++I C+ ++ +V+E + G +L + L + L +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ D A+ +EYL S IH DL N L+ + V +SDF +++ + +
Sbjct: 219 VGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPI 247
+ APE GR S+ DV+SFGI+L ETF+ G + P
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL-----------------GASPYP- 317
Query: 248 STMEVVDANLLSQEDIHFVAK-------EQCVSFVFNLAIECTVESPEQRINAREIVAKL 300
NL +Q+ FV K E C VF L +C P QR + I +L
Sbjct: 318 --------NLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Query: 301 FKIR 304
IR
Sbjct: 370 QSIR 373
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK+ + + F E + M + H L+K CS E +V EY+ +G L
Sbjct: 34 DVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL S L+ Q L + DV + +L S Q IH DL N L+D ++ +SDF
Sbjct: 93 YLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFG 149
Query: 171 IAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDE 229
+ + + + Q ++ T + APE + S+ DV++FGI++ E F+ K P D
Sbjct: 150 MTRYVLDD-QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
Query: 230 IFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVS-FVFNLAIECTVESPE 288
N E+ LK +SQ H + + S ++ + C E PE
Sbjct: 209 YTNSEVVLK-------------------VSQG--HRLYRPHLASDTIYQIMYSCWHELPE 247
Query: 289 QRINAREIVAKLFKIRD 305
+R +++++ + +R+
Sbjct: 248 KRPTFQQLLSSIEPLRE 264
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 128/276 (46%), Gaps = 32/276 (11%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + S E++V + L+ G + + F E +M H N+I++ + + +
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
V E M +GSL+ +L + + Q + ++ +AS ++YL +H DL N+L+
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNILI 180
Query: 159 DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ N+V +SDF ++++L + ++ T+ I +PE + ++ DV+S+GI+L
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 218 METFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVF 276
E + ++P E+ N+++ ++ VD E C + ++
Sbjct: 241 WEVMSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALY 280
Query: 277 NLAIECTVESPEQRINAREIVAKLFKIRDSLLRNVG 312
L ++C + R +IV+ I D L+RN G
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVS----ILDKLIRNPG 312
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDIFQ 123
+ F+ E ++M +H NL++++ S+ + LV YMP+GSL L L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
R I A+ + +LH + IH D+K N+LLD+ A +SDF +A+ Q +
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTL 237
+ + T +APE R G + D+YSFG++L+E T DE +RE L
Sbjct: 186 XXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE--HREPQL 236
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
F E ++K H N++++I C+ ++ +V+E + G +L + L + L +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ D A+ +EYL S IH DL N L+ + V +SDF +++ + +
Sbjct: 219 VGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR 275
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPI 247
+ APE GR S+ DV+SFGI+L ETF+ G + P
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL-----------------GASPYP- 317
Query: 248 STMEVVDANLLSQEDIHFVAK-------EQCVSFVFNLAIECTVESPEQRINAREIVAKL 300
NL +Q+ FV K E C VF L +C P QR + I +L
Sbjct: 318 --------NLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Query: 301 FKIR 304
IR
Sbjct: 370 QSIR 373
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF + +L+ + Q
Sbjct: 284 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREM 235
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 341 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 123
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K S T
Sbjct: 110 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 161
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
Q + APE R+ ST DV+SFGI+L E ++
Sbjct: 162 QDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQ 123
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K S T
Sbjct: 291 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 342
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
Q + APE R+ + ST DV+SFGI+L E ++
Sbjct: 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 124
++F E ++MK +RH L+++ + S E +V EYM G L +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ +AS + Y+ +H DL+ N+L+ +N+V ++DF +A+L+ + Q
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NR
Sbjct: 174 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---------- 222
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
EV+D + +C + +L +C + PE+R
Sbjct: 223 -------EVLDQ---VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 51 EVAVKVFNL--QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ + F++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSL 118
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
K+L+ +FQ ++I A ++YLH + +IH D+K N+ L + + + D
Sbjct: 119 YKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRE---STNGDVYSFGIMLMETFTRKK 225
F +A + + S Q ++ +APE R S DVYS+GI+L E T +
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 226 PTDEIFNRE 234
P I NR+
Sbjct: 236 PYSHINNRD 244
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E +V EYMP+G+L
Sbjct: 57 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 115
Query: 109 EKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N V ++
Sbjct: 116 LDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVA 172
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
DF +++L+TG+ + I APE S DV++FG++L E T
Sbjct: 173 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E +++E+M +G+L
Sbjct: 43 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 101
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 158
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 213 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 288 EQRINAREI 296
R + EI
Sbjct: 259 SDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E +++E+M +G+L
Sbjct: 39 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 97
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 98 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 154
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 155 DFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 208
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 209 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 254
Query: 288 EQRINAREI 296
R + EI
Sbjct: 255 SDRPSFAEI 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E +++E+M +G+L
Sbjct: 38 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 208 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 288 EQRINAREI 296
R + EI
Sbjct: 254 SDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 39 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 97
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 98 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 154
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 155 DFGLSRLMTGDTYTAPAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 208
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 209 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 254
Query: 288 EQRINAREI 296
R + EI
Sbjct: 255 SDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 40 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 155
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 156 DFGLSRLMTGDTYTAPAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 209
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 210 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 288 EQRINAREI 296
R + EI
Sbjct: 256 SDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 38 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 97 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 208 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 288 EQRINAREI 296
R + EI
Sbjct: 254 SDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E +++E+M +G+L
Sbjct: 38 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 208 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 288 EQRINAREI 296
R + EI
Sbjct: 254 SDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 38 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 97 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 208 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 288 EQRINAREI 296
R + EI
Sbjct: 254 SDRPSFAEI 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 43 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 158
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 159 DFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 213 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 288 EQRINAREI 296
R + EI
Sbjct: 259 SDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 43 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 158
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 213 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 288 EQRINAREI 296
R + EI
Sbjct: 259 SDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 42 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 100
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 101 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 157
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 158 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 211
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 212 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 257
Query: 288 EQRINAREI 296
R + EI
Sbjct: 258 SDRPSFAEI 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 51 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 109
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 110 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 166
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 167 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 220
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 221 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 266
Query: 288 EQRINAREI 296
R + EI
Sbjct: 267 SDRPSFAEI 275
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E +++E+M +G+L
Sbjct: 36 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 94
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 151
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 152 DFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 205
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P ++ L ++D E C V+ L C +P
Sbjct: 206 ------------YGMS--PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 288 EQRINAREI 296
R + EI
Sbjct: 252 SDRPSFAEI 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 43 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 158
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 213 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 288 EQRINAREI 296
R + EI
Sbjct: 259 SDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 40 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 155
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 156 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 209
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 210 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 288 EQRINAREI 296
R + EI
Sbjct: 256 SDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 40 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 99 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 155
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 156 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 209
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 210 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 288 EQRINAREI 296
R + EI
Sbjct: 256 SDRPSFAEI 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQR 124
+SF E ++MK ++H L+++ + S E +V EYM GSL +L L +
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNL 107
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
+++ VA+ + Y+ IH DL+ N+L+ + ++ ++DF +A+L+ + Q
Sbjct: 108 VDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTDEIFNREMTLKHWGNN 243
I APE GR + DV+SFGI+L E T+ + P + NRE+
Sbjct: 165 GAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV-------- 215
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQR 290
+E V+ + C + L I C + PE+R
Sbjct: 216 ------LEQVERGY------RMPCPQDCPISLHELMIHCWKKDPEER 250
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 38 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 208 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 288 EQRINAREI 296
R + EI
Sbjct: 254 SDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 38 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 208 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 288 EQRINAREI 296
R + EI
Sbjct: 254 SDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 43 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 102 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 158
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 212
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 213 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 258
Query: 288 EQRINAREI 296
R + EI
Sbjct: 259 SDRPSFAEI 267
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 51 EVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEE--FKALVLEYMPHG 106
++ VKV ++ R + FN EC ++ H N++ V+ C + L+ +MP+G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94
Query: 107 SLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
SL L+ +N ++D Q + +D+A + +LH H L +V++D++M A
Sbjct: 95 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMTAR 153
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTN---GDVYSFGIMLMETFT 222
+S + +QS + A +APE +K E TN D++SF ++L E T
Sbjct: 154 ISMADV----KFSFQSPGRMYAPA---WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
Query: 223 RKKPTDEIFNREMTLK 238
R+ P ++ N E+ +K
Sbjct: 207 REVPFADLSNMEIGMK 222
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDIFQ 123
+ F+ E ++ +H NL++++ S+ + LV Y P+GSL L L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 124 RLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
R I A+ + +LH + IH D+K N+LLD+ A +SDF +A+ Q +
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTL 237
++ + T APE R G + D+YSFG++L+E T DE +RE L
Sbjct: 183 XSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE--HREPQL 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
A +VA+K + R K+F +E + + H N++K+ C N LV+EY GSL
Sbjct: 32 AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL 87
Query: 109 EKYLYSSNCILDIFQRLNIM---IDVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVA 164
L+ + L + + M + + + YLH +IH DLKP N+LL V
Sbjct: 88 YNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 146
Query: 165 HLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
+ DF A + T + +APE S DV+S+GI+L E TR+
Sbjct: 147 KICDFGTACDI-----QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 201
Query: 225 KPTDEIFN---REMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
KP DEI R M H G T + NL + +L
Sbjct: 202 KPFDEIGGPAFRIMWAVHNG-------TRPPLIKNLPKP--------------IESLMTR 240
Query: 282 CTVESPEQRINAREIVAKLFKIRDSLLRNVGG 313
C + P QR + EIV KI L+R G
Sbjct: 241 CWSKDPSQRPSMEEIV----KIMTHLMRYFPG 268
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 70 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 130 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 228
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 229 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 75 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 135 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 233
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 234 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 97 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 157 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 255
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 256 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 136 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 234
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 235 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 36 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 151
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 152 DFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 205
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P ++ L ++D E C V+ L C +P
Sbjct: 206 ------------YGMS--PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 288 EQRINAREI 296
R + EI
Sbjct: 252 SDRPSFAEI 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 96 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 156 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 254
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 255 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 52 VAVKVFNLQCGRAFKS-FNIECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSL 108
VAVK CG +S + E ++++++ H ++IK C ++ K+L V+EY+P GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
YL + + + Q L + + YLH S IH +L NVLLD++ + + D
Sbjct: 106 RDYLPRHS--IGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 169 FSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
F +AK + G + + + APE ++ + DV+SFG+ L E T
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 73 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 133 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 231
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 232 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 90
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L+ ++ + ++I A ++YLH + +IH DLK N+ L +++ + D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 147
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + + S Q +I +APE R K S DVY+FGI+L E T +
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 226 PTDEIFNREMTLKHWGNNWL 245
P I NR+ + G +L
Sbjct: 208 PYSNINNRDQIIFMVGRGYL 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 236
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 237 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
A +VA+K + R K+F +E + + H N++K+ C N LV+EY GSL
Sbjct: 31 AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL 86
Query: 109 EKYLYSSNCILDIFQRLNIM---IDVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVA 164
L+ + L + + M + + + YLH +IH DLKP N+LL V
Sbjct: 87 YNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 165 HLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
+ DF A + T + +APE S DV+S+GI+L E TR+
Sbjct: 146 KICDFGTACDI-----QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP DEI + +N T + NL + +L C
Sbjct: 201 KPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTRCWS 242
Query: 285 ESPEQRINAREIVAKLFKIRDSLLRNVGG 313
+ P QR + EIV KI L+R G
Sbjct: 243 KDPSQRPSMEEIV----KIMTHLMRYFPG 267
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 236
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 237 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + EY S+ +
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 235
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 236 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + +VAV + L+ G + + F E +M H N++ + + + +
Sbjct: 62 GRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMI 121
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V+E+M +G+L+ +L + + Q + ++ +A+ + YL GY +H DL N+L
Sbjct: 122 VIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY----VHRDLAARNIL 177
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSM-TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF +++++ + +++ T T + APE + + ++ DV+S+GI+
Sbjct: 178 VNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIV 237
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
+ E + ++P +W +S +V+ A +E A C + +
Sbjct: 238 MWEVMSYGERP------------YWD-----MSNQDVIKA---IEEGYRLPAPMDCPAGL 277
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRN 310
L ++C + +R +IV I D ++RN
Sbjct: 278 HQLMLDCWQKERAERPKFEQIVG----ILDKMIRN 308
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 52 VAVKVFNLQCGRAFKS-FNIECEMMKSIRHRNLIKVISTCSNEEFKA--LVLEYMPHGSL 108
VAVK CG +S + E E+++++ H +++K C ++ K+ LV+EY+P GSL
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
YL +C+ + Q L + + YLH + IH L NVLLD++ + + D
Sbjct: 101 RDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGD 155
Query: 169 FSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
F +AK + G + + + APE ++ + DV+SFG+ L E T
Sbjct: 156 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 95
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L+ ++ + ++I A ++YLH + +IH DLK N+ L +++ + D
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 152
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + + S Q +I +APE R K S DVY+FGI+L E T +
Sbjct: 153 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
Query: 226 PTDEIFNREMTLKHWGNNWL 245
P I NR+ + G +L
Sbjct: 213 PYSNINNRDQIIFMVGRGYL 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 92
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L+ ++ + ++I A ++YLH + +IH DLK N+ L +++ + D
Sbjct: 93 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 149
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + + S Q +I +APE R K S DVY+FGI+L E T +
Sbjct: 150 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
Query: 226 PTDEIFNREMTLKHWGNNWL 245
P I NR+ + G +L
Sbjct: 210 PYSNINNRDQIIFMVGRGYL 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 52 VAVKVFNLQCGRAFKS-FNIECEMMKSIRHRNLIKVISTCSNEEFKA--LVLEYMPHGSL 108
VAVK CG +S + E E+++++ H +++K C ++ K+ LV+EY+P GSL
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
YL +C+ + Q L + + YLH + IH L NVLLD++ + + D
Sbjct: 100 RDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGD 154
Query: 169 FSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
F +AK + G + + + APE ++ + DV+SFG+ L E T
Sbjct: 155 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 94
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L++S ++ + ++I A ++YLH + +IH DLK N+ L ++ + D
Sbjct: 95 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 151
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + + S Q +I +APE R S DVY+FGI+L E T +
Sbjct: 152 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
Query: 226 PTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVE 285
P I NR+ + E+V LS D+ V + C + L EC +
Sbjct: 212 PYSNINNRDQII-------------EMVGRGSLS-PDLSKV-RSNCPKRMKRLMAECLKK 256
Query: 286 SPEQRINAREIVAKLFKIRDSLLRNVGG 313
++R + I+A++ + L R + G
Sbjct: 257 KRDERPSFPRILAEI----EELARELSG 280
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 95
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L+ ++ + ++I A ++YLH + +IH DLK N+ L +++ + D
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 152
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + + S Q +I +APE R K S DVY+FGI+L E T +
Sbjct: 153 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
Query: 226 PTDEIFNREMTLKHWGNNWL 245
P I NR+ + G +L
Sbjct: 213 PYSNINNRDQIIFMVGRGYL 232
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + E+ V + L+ G + + F E +M H N+I + + + +
Sbjct: 41 GRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMI 100
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL-HFGYSAQVIHCDLKPINVL 157
V EYM +GSL+ +L ++ + Q + ++ +++ ++YL GY +H DL N+L
Sbjct: 101 VTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY----VHRDLAARNIL 156
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIM 216
++ N+V +SDF ++++L + ++ T+ I APE + ++ DV+S+GI+
Sbjct: 157 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIV 216
Query: 217 LMETFT-RKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 275
+ E + ++P E+ N+++ I +E E + C + +
Sbjct: 217 MWEVVSYGERPYWEMTNQDV-----------IKAVE---------EGYRLPSPMDCPAAL 256
Query: 276 FNLAIECTVESPEQRINAREIVAKLFKIRDSLLRN 310
+ L ++C + R EIV L D L+RN
Sbjct: 257 YQLMLDCWQKERNSRPKFDEIVNML----DKLIRN 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSL 90
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L+ ++ + ++I A ++YLH + +IH DLK N+ L +++ + D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 147
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + + S Q +I +APE R K S DVY+FGI+L E T +
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 226 PTDEIFNREMTLKHWGNNWL 245
P I NR+ + G +L
Sbjct: 208 PYSNINNRDQIIFMVGRGYL 227
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 24/241 (9%)
Query: 20 RRSQTSDFQILNFFICGVIIPVAQFLISSAM----------EVAVKVFNLQCG--RAFKS 67
RR + D++I + I V Q + S + +VAVK+ N+ + ++
Sbjct: 24 RRDSSDDWEIPDGQIT-----VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA 78
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
F E +++ RH N++ + + + A+V ++ SL +L+ ++ + ++I
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
A ++YLH + +IH DLK N+ L +++ + DF +A + + S Q
Sbjct: 138 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 188 LATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
+I +APE R K S DVY+FGI+L E T + P I NR+ + G +
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 254
Query: 245 L 245
L
Sbjct: 255 L 255
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 24/241 (9%)
Query: 20 RRSQTSDFQILNFFICGVIIPVAQFLISSAM----------EVAVKVFNLQCG--RAFKS 67
RR + D++I + I V Q + S + +VAVK+ N+ + ++
Sbjct: 23 RRDSSDDWEIPDGQIT-----VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA 77
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
F E +++ RH N++ + + + A+V ++ SL +L+ ++ + ++I
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 136
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
A ++YLH + +IH DLK N+ L +++ + DF +A + + S Q
Sbjct: 137 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 188 LATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
+I +APE R K S DVY+FGI+L E T + P I NR+ + G +
Sbjct: 194 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 253
Query: 245 L 245
L
Sbjct: 254 L 254
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEE 94
G+ +P + + + VA+K+ N G +A F E +M S+ H +L++++ C +
Sbjct: 34 GIWVPEGE---TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT 90
Query: 95 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
+ LV + MPHG L +Y++ + LN + +A + YL +++H DL
Sbjct: 91 IQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAAR 146
Query: 155 NVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVY 211
NVL+ ++DF +A+LL G+ + I +A E YR+ +S DV+
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS---DVW 203
Query: 212 SFGIMLMETFT-RKKPTDEIFNREMT 236
S+G+ + E T KP D I RE+
Sbjct: 204 SYGVTIWELMTFGGKPYDGIPTREIP 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEE 94
G+ +P + + + VA+K+ N G +A F E +M S+ H +L++++ C +
Sbjct: 57 GIWVPEGE---TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT 113
Query: 95 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
+ LV + MPHG L +Y++ + LN + +A + YL +++H DL
Sbjct: 114 IQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAAR 169
Query: 155 NVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVY 211
NVL+ ++DF +A+LL G+ + I +A E YR+ +S DV+
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS---DVW 226
Query: 212 SFGIMLMETFT-RKKPTDEIFNREMT 236
S+G+ + E T KP D I RE+
Sbjct: 227 SYGVTIWELMTFGGKPYDGIPTREIP 252
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 51 EVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
E+ V + L+ G + + F E +M H N+I + + ++ E+M +GS
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L+ +L ++ + Q + ++ +A+ ++YL +H DL N+L++ N+V +S
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVS 177
Query: 168 DFSIAKLLTGEYQSMTQTQTLA---TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-R 223
DF +++ L + T T L I APE + + ++ DV+S+GI++ E +
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 224 KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECT 283
++P +W ++ +V++A ++D C S + L ++C
Sbjct: 238 ERP------------YWD-----MTNQDVINA---IEQDYRLPPPMDCPSALHQLMLDCW 277
Query: 284 VESPEQRINAREIVAKLFKIRDSLLRN 310
+ R +IV L D ++RN
Sbjct: 278 QKDRNHRPKFGQIVNTL----DKMIRN 300
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ +L E+ S+ +
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 237
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 238 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 52 VAVKVFNLQCGRAFKS-FNIECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSL 108
VAVK CG +S + E ++++++ H ++IK C ++ K+L V+EY+P GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
YL + + + Q L + + YLH + IH +L NVLLD++ + + D
Sbjct: 106 RDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 169 FSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
F +AK + G + + + APE ++ + DV+SFG+ L E T
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 51 EVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
E V + L+ G R + F E +M H N+I++ +N ++ E+M +G+
Sbjct: 44 ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 103
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L+ +L ++ + Q + ++ +AS + YL +H DL N+L++ N+V +S
Sbjct: 104 LDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVS 160
Query: 168 DFSIAKLLTGEYQSMTQTQTLA---TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-R 223
DF +++ L T+T +L I APE + ++ D +S+GI++ E +
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 224 KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECT 283
++P +W +S +V++A ++D C + + L ++C
Sbjct: 221 ERP------------YWD-----MSNQDVINA---IEQDYRLPPPPDCPTSLHQLMLDCW 260
Query: 284 VESPEQRINAREIVAKLFKIRDSLLRN 310
++ NAR ++ D ++RN
Sbjct: 261 ----QKDRNARPRFPQVVSALDKMIRN 283
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 36 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH DL N L+ +N + ++
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 151
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 152 DFGLSRLMTGDTFTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 205
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P ++ L ++D E C V+ L C +P
Sbjct: 206 ------------YGMS--PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 288 EQRINAREI 296
R + EI
Sbjct: 252 SDRPSFAEI 260
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 154 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 213 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 289 QR 290
R
Sbjct: 253 DR 254
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 41 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 98
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 99 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 155
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 156 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 214
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 215 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 254
Query: 289 QR 290
R
Sbjct: 255 DR 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 40 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 97
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 98 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 154
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 155 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 213
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 214 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 253
Query: 289 QR 290
R
Sbjct: 254 DR 255
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 34 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 91
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 92 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 148
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PT 227
+A+L+ EY + + I APE G + DV+SFGI+L E T + P
Sbjct: 149 GLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+ N E V NL + V + C ++ L C E P
Sbjct: 207 PGMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERP 246
Query: 288 EQR 290
E R
Sbjct: 247 EDR 249
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PT 227
+A+L+ EY + + I APE G + DV+SFGI+L E T + P
Sbjct: 154 GLARLIEDNEYTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+ N E V NL + V + C ++ L C E P
Sbjct: 212 PGMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 288 EQR 290
E R
Sbjct: 252 EDR 254
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 154 GLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 213 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 289 QR 290
R
Sbjct: 253 DR 254
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 154 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 213 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 289 QR 290
R
Sbjct: 253 DR 254
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 48 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 105
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 106 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 162
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 163 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 221
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 222 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 261
Query: 289 QR 290
R
Sbjct: 262 DR 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 90
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L+ ++ + ++I A ++YLH + +IH DLK N+ L +++ + D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 147
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + S Q +I +APE R K S DVY+FGI+L E T +
Sbjct: 148 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 226 PTDEIFNREMTLKHWGNNWL 245
P I NR+ + G +L
Sbjct: 208 PYSNINNRDQIIFMVGRGYL 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 45 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 102
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 159
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PT 227
+A+L+ EY + + I APE G + DV+SFGI+L E T + P
Sbjct: 160 GLARLIEDNEYTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+ N E V NL + V + C ++ L C E P
Sbjct: 218 PGMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERP 257
Query: 288 EQR 290
E R
Sbjct: 258 EDR 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 44 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 101
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 102 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 158
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PT 227
+A+L+ EY + + I APE G + DV+SFGI+L E T + P
Sbjct: 159 GLARLIEDNEYTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+ N E V NL + V + C ++ L C E P
Sbjct: 217 PGMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERP 256
Query: 288 EQR 290
E R
Sbjct: 257 EDR 259
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 30 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 89 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 145
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+++ +L EY S ++ + PE + S+ D+++FG+++ E ++ K E
Sbjct: 146 LSRYVLDDEYTSSVGSK--FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
Query: 230 IFNREMTLKH 239
F T +H
Sbjct: 204 RFTNSETAEH 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 35 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 94 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+++ +L EY S ++ + PE + S+ D+++FG+++ E ++ K E
Sbjct: 151 LSRYVLDDEYTSSVGSK--FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
Query: 230 IFNREMTLKH 239
F T +H
Sbjct: 209 RFTNSETAEH 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 284 SLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 342
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH +L N L+ +N + ++
Sbjct: 343 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVA 399
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 400 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 453
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 454 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 499
Query: 288 EQRINAREI 296
R + EI
Sbjct: 500 SDRPSFAEI 508
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 34 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 92
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 93 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 149
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+++ +L EY S ++ + PE + S+ D+++FG+++ E ++ K E
Sbjct: 150 LSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
Query: 230 IFNREMTLKH 239
F T +H
Sbjct: 208 RFTNSETAEH 217
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
+ VA ++YL S + +H DL N +LD+ ++DF +A+ + + +
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 187 TLA--TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T A + +A E + + +T DV+SFG++L E TR P
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 235
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 236 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 47 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 104
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 105 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 161
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 162 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 220
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 221 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 260
Query: 289 QR 290
R
Sbjct: 261 DR 262
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 41 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 100 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 156
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+++ +L EY S ++ + PE + S+ D+++FG+++ E ++ K E
Sbjct: 157 LSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
Query: 230 IFNREMTLKH 239
F T +H
Sbjct: 215 RFTNSETAEH 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 28/276 (10%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVIS-TCSNEE 94
G I AQ I A++ ++ +Q AF E +M+ + H N++ +I E
Sbjct: 40 GEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR---EGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 95 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
++L YM HG L +++ S + ++ + VA +EYL + +H DL
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAAR 153
Query: 155 NVLLDDNMVAHLSDFSIAK-LLTGEYQSMTQ-TQTLATIGCIAPEYRRKGRESTNGDVYS 212
N +LD++ ++DF +A+ +L EY S+ Q + A E + R +T DV+S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 213 FGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCV 272
FG++L E TR P P ++ D + E C
Sbjct: 214 FGVLLWELLTRGAP-------------------PYRHIDPFDLTHFLAQGRRLPQPEYCP 254
Query: 273 SFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLL 308
++ + +C P R R +V ++ +I +LL
Sbjct: 255 DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 45 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 102
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 159
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PTD 228
+A+L+ + + I APE G + DV+SFGI+L E T + P
Sbjct: 160 GLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 218
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ N E V NL + V + C ++ L C E PE
Sbjct: 219 GMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 258
Query: 289 QR 290
R
Sbjct: 259 DR 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 50 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+++ +L EY S ++ + PE + S+ D+++FG+++ E ++ K E
Sbjct: 166 LSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
Query: 230 IFNREMTLKH 239
F T +H
Sbjct: 224 RFTNSETAEH 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA--LVLEYM 103
++ +VAVK + G E E+++++ H N++K C+ + L++E++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
P GSL++YL + +++ Q+L + + ++YL S Q +H DL NVL++
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQ 164
Query: 164 AHLSDFSIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF + K + + + T + + + APE + + DV+SFG+ L E T
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA--LVLEYM 103
++ +VAVK + G E E+++++ H N++K C+ + L++E++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
P GSL++YL + +++ Q+L + + ++YL S Q +H DL NVL++
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQ 152
Query: 164 AHLSDFSIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF + K + + + T + + + APE + + DV+SFG+ L E T
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 49 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 106
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D + ++DF
Sbjct: 107 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 163
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PT 227
+A+L+ EY + + I APE G + DV+SFGI+L E T + P
Sbjct: 164 GLARLIEDNEYTAREGAK--FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+ N E V NL + V + C ++ L C E P
Sbjct: 222 PGMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERP 261
Query: 288 EQR 290
E R
Sbjct: 262 EDR 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 106
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L++S ++ + ++I A ++YLH + +IH DLK N+ L ++ + D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + S Q +I +APE R S DVY+FGI+L E T +
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 226 PTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVE 285
P I NR+ + E+V LS D+ V + C + L EC +
Sbjct: 224 PYSNINNRDQII-------------EMVGRGSLS-PDLSKV-RSNCPKRMKRLMAECLKK 268
Query: 286 SPEQRINAREIVAKLFKIRDSLLRNVGG 313
++R + I+A++ + L R + G
Sbjct: 269 KRDERPSFPRILAEI----EELARELSG 292
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 242 SLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 300
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N ++ L + ++SA+EYL IH +L N L+ +N + ++
Sbjct: 301 LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVA 357
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 358 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG--- 413
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
M+ P +++ L ++D E C V+ L C +P
Sbjct: 414 -------MS---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 457
Query: 288 EQRINAREI 296
R + EI
Sbjct: 458 SDRPSFAEI 466
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 35 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 94 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+++ +L EY S ++ + PE + S+ D+++FG+++ E ++ K E
Sbjct: 151 LSRYVLDDEYTSSRGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
Query: 230 IFNREMTLKH 239
F T +H
Sbjct: 209 RFTNSETAEH 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 51 EVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
E V + L+ G R + F E +M H N+I++ +N ++ E+M +G+
Sbjct: 42 ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 101
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L+ +L ++ + Q + ++ +AS + YL +H DL N+L++ N+V +S
Sbjct: 102 LDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVS 158
Query: 168 DFSIAKLLTGEYQSMTQTQTLA---TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-R 223
DF +++ L T T +L I APE + ++ D +S+GI++ E +
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 224 KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECT 283
++P +W +S +V++A ++D C + + L ++C
Sbjct: 219 ERP------------YWD-----MSNQDVINA---IEQDYRLPPPPDCPTSLHQLMLDCW 258
Query: 284 VESPEQRINAREIVAKLFKIRDSLLRN 310
++ NAR ++ D ++RN
Sbjct: 259 ----QKDRNARPRFPQVVSALDKMIRN 281
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 20 RRSQTSDFQILNFFICGVIIPVAQFLISSAM----------EVAVKVFNLQCG--RAFKS 67
RR + D++I + I V Q + S + +VAVK+ N+ + ++
Sbjct: 24 RRDSSDDWEIPDGQIT-----VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA 78
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
F E +++ RH N++ + + + A+V ++ SL +L+ ++ + ++I
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
A ++YLH + +IH DLK N+ L +++ + DF +A + S Q
Sbjct: 138 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 188 LATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
+I +APE R K S DVY+FGI+L E T + P I NR+ + G +
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 254
Query: 245 L 245
L
Sbjct: 255 L 255
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 20 RRSQTSDFQILNFFICGVIIPVAQFLISSAM----------EVAVKVFNLQCG--RAFKS 67
RR + D++I + I V Q + S + +VAVK+ N+ + ++
Sbjct: 16 RRDSSDDWEIPDGQIT-----VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA 70
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
F E +++ RH N++ + + + A+V ++ SL +L+ ++ + ++I
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 129
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
A ++YLH + +IH DLK N+ L +++ + DF +A + S Q
Sbjct: 130 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 188 LATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
+I +APE R K S DVY+FGI+L E T + P I NR+ + G +
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 246
Query: 245 L 245
L
Sbjct: 247 L 247
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++ VAVK + + F E +MK I+H NL++++ C+ E ++ E+M +G+L
Sbjct: 245 SLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303
Query: 109 EKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
YL N + L + ++SA+EYL IH +L N L+ +N + ++
Sbjct: 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVA 360
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF +++L+TG+ + I APE + S DV++FG++L E T
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 414
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+G + P +++ L ++D E C V+ L C +P
Sbjct: 415 ------------YGMS--PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 460
Query: 288 EQRINAREI 296
R + EI
Sbjct: 461 SDRPSFAEI 469
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ + E+ S+ +
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 237
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 238 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++ ++H N+I + C E LV+E+ G L + L DI +N +
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQ 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLD--------DNMVAHLSDFSIAKLLTGEYQSM 182
+A + YLH +IH DLK N+L+ N + ++DF +A+ E+
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRT 169
Query: 183 TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T+ +APE R S DV+S+G++L E T + P
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ + E+ S+ +
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 236
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 237 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ + E+ S+ +
Sbjct: 136 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 234
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 235 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ + E+ S+ +
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 236
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 237 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 83 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 142
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ + E+ S+ +
Sbjct: 143 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 241
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 242 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 122
K F E + H+N++ +I ++ LV+EY+ +L +Y+ S+ L +
Sbjct: 53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVD 111
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSM 182
+N + +++ H +++H D+KP N+L+D N + DF IAK L+ S+
Sbjct: 112 TAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS--ETSL 166
Query: 183 TQT-QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNRE----MTL 237
TQT L T+ +PE + D+YS GI+L E + P FN E + +
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAI 222
Query: 238 KHWGNNWLPIST 249
KH ++ ++T
Sbjct: 223 KHIQDSVPNVTT 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 24/255 (9%)
Query: 51 EVAVKVFNLQCG--RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSL 106
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+L++S ++ + ++I A ++YLH + +IH DLK N+ L ++ + D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRR---KGRESTNGDVYSFGIMLMETFTRKK 225
F +A + S Q +I +APE R S DVY+FGI+L E T +
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 226 PTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVE 285
P I NR+ + E+V LS D+ V + C + L EC +
Sbjct: 224 PYSNINNRDQII-------------EMVGRGSLS-PDLSKV-RSNCPKRMKRLMAECLKK 268
Query: 286 SPEQRINAREIVAKL 300
++R + I+A++
Sbjct: 269 KRDERPSFPRILAEI 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 126
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 196
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSM-TQ 184
+ VA +++L S + +H DL N +LD+ ++DF +A+ + E+ S+ +
Sbjct: 197 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
T + +A E + + +T DV+SFG++L E TR P
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP------------------ 295
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
P + D + + + E C ++ + ++C E R + E+V+++ I
Sbjct: 296 -PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 35 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 92
Query: 111 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L + + I L I + L++ +A + ++ IH +L+ N+L+ D + ++DF
Sbjct: 93 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADF 149
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-PT 227
+A+L+ EY + + I APE G + DV+SFGI+L E T + P
Sbjct: 150 GLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESP 287
+ N E V NL + V + C ++ L C E P
Sbjct: 208 PGMTNPE------------------VIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERP 247
Query: 288 EQR 290
E R
Sbjct: 248 EDR 250
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 50 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL Q L + DV A+EYL S Q +H DL N L++D V +SDF
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 171 IAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEI 230
+++ + + + + + + PE + S+ D+++FG+++ E ++ K E
Sbjct: 166 LSRYVLDD-EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 231 FNREMTLKH 239
F T +H
Sbjct: 225 FTNSETAEH 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 51 EVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
E+ V + L+ G + + F E +M H N+I + + ++ E+M +GS
Sbjct: 35 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 94
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L+ +L ++ + Q + ++ +A+ ++YL +H L N+L++ N+V +S
Sbjct: 95 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVS 151
Query: 168 DFSIAKLLTGEYQSMTQTQTLA---TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-R 223
DF +++ L + T T L I APE + + ++ DV+S+GI++ E +
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 224 KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECT 283
++P ++ N+++ I+ +E +D C S + L ++C
Sbjct: 212 ERPYWDMTNQDV-----------INAIE---------QDYRLPPPMDCPSALHQLMLDCW 251
Query: 284 VESPEQRINAREIVAKLFKIRDSLLRN 310
+ R +IV L D ++RN
Sbjct: 252 QKDRNHRPKFGQIVNTL----DKMIRN 274
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 52 VAVKVFNLQCGRAFKS-FNIECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSL 108
VAVK G +S + E ++++++ H ++IK C + +L V+EY+P GSL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
YL + + + Q L + + YLH + IH DL NVLLD++ + + D
Sbjct: 123 RDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGD 177
Query: 169 FSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
F +AK + G + + + APE ++ + DV+SFG+ L E T
Sbjct: 178 FGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK + ++F E +MK+++H L+K+ + + E ++ E+M GSL
Sbjct: 41 KVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLD 98
Query: 111 YLYSSNCILDIFQRLNIMIDVASAL-EYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L S Q L +ID ++ + E + F IH DL+ N+L+ ++V ++DF
Sbjct: 99 FLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF 155
Query: 170 SIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
+A+++ EY + + I APE G + DV+SFGI+LME T
Sbjct: 156 GLARVIEDNEYTAREGAKF--PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT------ 207
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ R +P M + + E C ++N+ + C PE
Sbjct: 208 --YGR-----------IPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 254
Query: 289 QR 290
+R
Sbjct: 255 ER 256
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + E+ V + L+ G + + F E +M H N+I + + + +
Sbjct: 48 GRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMI 107
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+ EYM +GSL+ +L ++ + Q + ++ + S ++YL +H DL N+L+
Sbjct: 108 ITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILV 164
Query: 159 DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ N+V +SDF ++++L + ++ T+ I APE + ++ DV+S+GI++
Sbjct: 165 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 224
Query: 218 METFT-RKKPTDEIFNREM 235
E + ++P ++ N+++
Sbjct: 225 WEVMSYGERPYWDMSNQDV 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 66 KSFNIECEMM-KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 118
+ F E E++ K H N+I ++ C + + L +EY PHG+L +L S +
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 119
Query: 119 ---------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
L Q L+ DVA ++YL Q IH DL N+L+ +N VA ++DF
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF 176
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+++ G+ + +T + +A E +TN DV+S+G++L E
Sbjct: 177 GLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 66 KSFNIECEMM-KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 118
+ F E E++ K H N+I ++ C + + L +EY PHG+L +L S +
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 129
Query: 119 ---------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
L Q L+ DVA ++YL Q IH DL N+L+ +N VA ++DF
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF 186
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+++ G+ + +T + +A E +TN DV+S+G++L E
Sbjct: 187 GLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + E+ V + L+ G + + F E +M H N+I + + + +
Sbjct: 27 GRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMI 86
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+ EYM +GSL+ +L ++ + Q + ++ + S ++YL +H DL N+L+
Sbjct: 87 ITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILV 143
Query: 159 DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ N+V +SDF ++++L + ++ T+ I APE + ++ DV+S+GI++
Sbjct: 144 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 203
Query: 218 METFT-RKKPTDEIFNREM 235
E + ++P ++ N+++
Sbjct: 204 WEVMSYGERPYWDMSNQDV 222
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 42 AQFLISSAMEVAVKVFNLQCG---RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL 98
+ + E+ V + L+ G + + F E +M H N+I + + + +
Sbjct: 33 GRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMI 92
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+ EYM +GSL+ +L ++ + Q + ++ + S ++YL +H DL N+L+
Sbjct: 93 ITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILV 149
Query: 159 DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ N+V +SDF ++++L + ++ T+ I APE + ++ DV+S+GI++
Sbjct: 150 NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 209
Query: 218 METFT-RKKPTDEIFNREM 235
E + ++P ++ N+++
Sbjct: 210 WEVMSYGERPYWDMSNQDV 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK + ++F E +MK+++H L+K+ + + E ++ E+M GSL
Sbjct: 214 KVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLD 271
Query: 111 YLYSSNCILDIFQRLNIMIDVASAL-EYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L S Q L +ID ++ + E + F IH DL+ N+L+ ++V ++DF
Sbjct: 272 FLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF 328
Query: 170 SIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
+A+++ EY + + I APE G + DV+SFGI+LME T
Sbjct: 329 GLARVIEDNEYTAREGAKF--PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT------ 380
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPE 288
+ R +P M + + E C ++N+ + C PE
Sbjct: 381 --YGR-----------IPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 427
Query: 289 QR 290
+R
Sbjct: 428 ER 429
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 47 SSAMEVAVKVFNLQCGR-AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ +VAVK L+ G + ++F E +MK+++H L+++ + + EE ++ EYM
Sbjct: 35 NNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAK 92
Query: 106 GSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA 164
GSL +L S + +L + +A + Y+ IH DL+ NVL+ ++++
Sbjct: 93 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMC 149
Query: 165 HLSDFSIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTR 223
++DF +A+++ EY + + I APE G + DV+SFGI+L E T
Sbjct: 150 KIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTY 207
Query: 224 KK 225
K
Sbjct: 208 GK 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 13 ILSRDVFRRSQTSDFQILNFFICGVI-----IPVAQFLISSAMEVAVKVFNLQCGR-AFK 66
+L+R +F+ ++ ++L + G + IP + S + V +KV + GR +F+
Sbjct: 23 VLAR-IFKETELRKLKVLGSGVFGTVHKGVWIPEGE---SIKIPVCIKVIEDKSGRQSFQ 78
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 126
+ + S+ H ++++++ C + LV +Y+P GSL ++ L LN
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLN 137
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
+ +A + YL ++H +L NVLL ++DF +A LL + + + ++
Sbjct: 138 WGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
I +A E G+ + DV+S+G+ + E T
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 13 ILSRDVFRRSQTSDFQILNFFICGVI-----IPVAQFLISSAMEVAVKVFNLQCGR-AFK 66
+L+R +F+ ++ ++L + G + IP + S + V +KV + GR +F+
Sbjct: 5 VLAR-IFKETELRKLKVLGSGVFGTVHKGVWIPEGE---SIKIPVCIKVIEDKSGRQSFQ 60
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 126
+ + S+ H ++++++ C + LV +Y+P GSL ++ L LN
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
+ +A + YL ++H +L NVLL ++DF +A LL + + + ++
Sbjct: 120 WGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
I +A E G+ + DV+S+G+ + E T
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 51 EVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEE--FKALVLEYMPHG 106
++ VKV ++ R + FN EC ++ H N++ V+ C + L+ + P+G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYG 94
Query: 107 SLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
SL L+ +N ++D Q + +D A +LH H L +V +D++ A
Sbjct: 95 SLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNSRSVXIDEDXTAR 153
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTN---GDVYSFGIMLMETFT 222
+S + +QS + A +APE +K E TN D +SF ++L E T
Sbjct: 154 ISXADV----KFSFQSPGRXYAPA---WVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
Query: 223 RKKPTDEIFNREMTLK 238
R+ P ++ N E+ K
Sbjct: 207 REVPFADLSNXEIGXK 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 66 KSFNIECEMM-KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 118
+ F E E++ K H N+I ++ C + + L +EY PHG+L +L S +
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 126
Query: 119 ---------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
L Q L+ DVA ++YL Q IH +L N+L+ +N VA ++DF
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADF 183
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+++ G+ + +T + +A E +TN DV+S+G++L E
Sbjct: 184 GLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAE 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + S + D+++ G ++ +
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQ 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 25/187 (13%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
++F E ++M+ + H N++K I ++ + EY+ G+L + S + QR+
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV 111
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ D+AS + YLH S +IH DL N L+ +N ++DF +A+L+ E TQ
Sbjct: 112 SFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE---KTQP 165
Query: 186 QTLATIGCIAPEYRRK----------GRESTNG-------DVYSFGIMLMETFTRKKPTD 228
+ L ++ P+ +++ E NG DV+SFGI+L E R
Sbjct: 166 EGLRSLK--KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADP 223
Query: 229 EIFNREM 235
+ R M
Sbjct: 224 DYLPRTM 230
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 19 FRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSI 78
+ + D +L G++ A +S+ + +A+K + R + + E + K +
Sbjct: 5 YEYDENGDRVVLGKGTYGIV--YAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL 62
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMI-DVASALE 136
+H+N+++ + + S F + +E +P GSL L S + D Q + + L+
Sbjct: 63 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 122
Query: 137 YLHFGYSAQVIHCDLKPINVLLDD-NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIA 195
YLH Q++H D+K NVL++ + V +SDF +K L G T+T T T+ +A
Sbjct: 123 YLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-INPCTETFT-GTLQYMA 177
Query: 196 PEYRRKGRESTN--GDVYSFGIMLMETFTRKKPTDEI 230
PE KG D++S G ++E T K P E+
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 19 FRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSI 78
+ + D +L G++ A +S+ + +A+K + R + + E + K +
Sbjct: 19 YEYDENGDRVVLGKGTYGIV--YAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL 76
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMI-DVASALE 136
+H+N+++ + + S F + +E +P GSL L S + D Q + + L+
Sbjct: 77 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 137 YLHFGYSAQVIHCDLKPINVLLDD-NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIA 195
YLH Q++H D+K NVL++ + V +SDF +K L G T+T T T+ +A
Sbjct: 137 YLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-INPCTETFT-GTLQYMA 191
Query: 196 PEYRRKGRESTN--GDVYSFGIMLMETFTRKKP 226
PE KG D++S G ++E T K P
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 39/259 (15%)
Query: 47 SSAMEVAVKVF--NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA------L 98
S ++VAVK+ ++ + F E MK H ++ K++ K +
Sbjct: 49 GSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV 108
Query: 99 VLEYMPHGSLEKYLYSSNCILDIFQR-----LNIMIDVASALEYLHFGYSAQVIHCDLKP 153
+L +M HG L +L +S + F + M+D+A +EYL S IH DL
Sbjct: 109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAA 165
Query: 154 INVLLDDNMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
N +L ++M ++DF ++ K+ +G+Y L + +A E + + DV++
Sbjct: 166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL-PVKWLALESLADNLYTVHSDVWA 224
Query: 213 FGIMLMETFTRKK-PTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQC 271
FG+ + E TR + P I N E+ N+L + N L Q +C
Sbjct: 225 FGVTMWEIMTRGQTPYAGIENAEIY------NYL-------IGGNRLKQ-------PPEC 264
Query: 272 VSFVFNLAIECTVESPEQR 290
+ V++L +C P+QR
Sbjct: 265 MEEVYDLMYQCWSADPKQR 283
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 47 SSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKAL-----V 99
++++VAVK L R + F E MK H N+I+++ C + + +
Sbjct: 60 GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI 119
Query: 100 LEYMPHGSLEKYLYSSNCI-----LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
L +M +G L YL S + + L M+D+A +EYL + +H DL
Sbjct: 120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAAR 176
Query: 155 NVLLDDNMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
N +L D+M ++DF ++ K+ +G+Y + + + IA E ++ DV++F
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP-VKWIAIESLADRVYTSKSDVWAF 235
Query: 214 GIMLMETFTRK-KPTDEIFNREM 235
G+ + E TR P + N EM
Sbjct: 236 GVTMWEIATRGMTPYPGVQNHEM 258
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 51 EVAVKVFNLQCGRA---FKSFNIECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYM 103
+VAVKV R + F E + ++ H ++ V T E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+L +++ + + I + +A A + L+F + +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF IA+ + S+TQT + T ++PE R DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 RKKPTDEIFNREMTLKHWGNNWLPIST 249
+ P + +H + +P S
Sbjct: 215 GEPPFTGDSPDSVAYQHVREDPIPPSA 241
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 117 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQ 202
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 51 EVAVKVFNLQCGRA---FKSFNIECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYM 103
+VAVKV R + F E + ++ H ++ V +T E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+L +++ + + I + +A A + L+F + +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF IA+ + S+TQT + T ++PE R DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 RKKPTDEIFNREMTLKHWGNNWLPIST 249
+ P + +H + +P S
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 117
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQ 203
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 115
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 116 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQ 201
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 137
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQ 223
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 122
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQ 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 51 EVAVKVFNLQCGRA---FKSFNIECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYM 103
+VAVKV R + F E + ++ H ++ V T E +V+EY+
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+L +++ + + I + +A A + L+F + +IH D+KP N+++
Sbjct: 116 DGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNA 171
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF IA+ + S+TQT + T ++PE R DVYS G +L E T
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 223 RKKPTDEIFNREMTLKHWGNNWLPIST 249
+ P + +H + +P S
Sbjct: 232 GEPPFTGDSPVSVAYQHVREDPIPPSA 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 137
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQ 223
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 118
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 119 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQ 204
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 141
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQ 227
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQ 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQ 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQ 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQ 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQ 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQ 224
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQ 224
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 141
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQ 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQ 226
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 51 EVAVKVFNLQCGRA---FKSFNIECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYM 103
+VAVKV R + F E + ++ H ++ V T E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+L +++ + + I + +A A + L+F + +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF IA+ + S+TQT + T ++PE R DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 RKKPTDEIFNREMTLKHWGNNWLPIST 249
+ P + +H + +P S
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFN-----IECEMMKSIRHRNLIKV------ISTCSNEEFK 96
+ +VA+K QC + N +E ++MK + H N++ + + +
Sbjct: 38 TGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93
Query: 97 ALVLEYMPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
L +EY G L KYL + + C L ++ D++SAL YLH ++IH DLKP
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPE 150
Query: 155 NVLLDDN---MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVY 211
N++L ++ + D AK L Q T+ + T+ +APE + + + D +
Sbjct: 151 NIVLQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 207
Query: 212 SFGIMLMETFTRKKP 226
SFG + E T +P
Sbjct: 208 SFGTLAFECITGFRP 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ T ++E L Y +G L KY+ + R +
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 143
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 144 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQ 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 51 EVAVKVFNLQCGRA---FKSFNIECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYM 103
+VAVKV R + F E + ++ H ++ V T E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+L +++ + + I + +A A + L+F + +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF IA+ + S+TQT + T ++PE R DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 RKKPTDEIFNREMTLKHWGNNWLPIST 249
+ P + +H + +P S
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFN-----IECEMMKSIRHRNLIKV------ISTCSNEEFK 96
+ +VA+K QC + N +E ++MK + H N++ + + +
Sbjct: 39 TGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 94
Query: 97 ALVLEYMPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
L +EY G L KYL + + C L ++ D++SAL YLH ++IH DLKP
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPE 151
Query: 155 NVLLDDN---MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVY 211
N++L ++ + D AK L Q T+ + T+ +APE + + + D +
Sbjct: 152 NIVLQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 208
Query: 212 SFGIMLMETFTRKKP 226
SFG + E T +P
Sbjct: 209 SFGTLAFECITGFRP 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 42/248 (16%)
Query: 65 FKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
F+ F E +M ++ H N++K+ N +V+E++P G L L + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDN--MVAHLSDFSIAKL----- 174
L +M+D+A +EY+ + ++H DL+ N+ L D+N + A ++DFS+++
Sbjct: 125 LRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV 183
Query: 175 --LTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFN 232
L G +Q M TIG Y K D YSF ++L T + P DE
Sbjct: 184 SGLLGNFQWMAPE----TIGAEEESYTEKA------DTYSFAMILYTILTGEGPFDE--- 230
Query: 233 REMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRIN 292
S ++ N++ +E + E C + N+ C P++R +
Sbjct: 231 --------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 293 AREIVAKL 300
IV +L
Sbjct: 277 FSYIVKEL 284
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 36/241 (14%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
+VAVK + ++F E +MK+++H L+K+ + + E ++ E+M GSL
Sbjct: 208 KVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLD 265
Query: 111 YLYSSNCILDIFQRLNIMIDVASAL-EYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L S Q L +ID ++ + E + F IH DL+ N+L+ ++V ++DF
Sbjct: 266 FLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF 322
Query: 170 SIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+A++ I APE G + DV+SFGI+LME T
Sbjct: 323 GLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT------- 364
Query: 230 IFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQ 289
+ R +P M + + E C ++N+ + C PE+
Sbjct: 365 -YGR-----------IPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 412
Query: 290 R 290
R
Sbjct: 413 R 413
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 168
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 169 DLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 227
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 228 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 268
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 269 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 47 SSAMEVAVKVFNLQCGR-AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ +VAVK L+ G + ++F E +MK+++H L+++ + + EE ++ E+M
Sbjct: 34 NNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAK 91
Query: 106 GSLEKYLYSSNCILDIFQRL-NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA 164
GSL +L S + +L + +A + Y+ IH DL+ NVL+ ++++
Sbjct: 92 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMC 148
Query: 165 HLSDFSIAKLL-TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTR 223
++DF +A+++ EY + + I APE G + +V+SFGI+L E T
Sbjct: 149 KIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTY 206
Query: 224 KK 225
K
Sbjct: 207 GK 208
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 182 DLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 240
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 241 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 281
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 92
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 148 DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 206
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 207 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 248
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 249 VQCWAHKPEDR 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 39/274 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGD 209
DL NVL+ +N V ++DF +A+ + T + +APE + D
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 210 VYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE 269
V+SFG+++ E FT G + P + V + L +E
Sbjct: 242 VWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKPA 282
Query: 270 QCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 283 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 39/274 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGD 209
DL NVL+ +N V ++DF +A+ + T + +APE + D
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 210 VYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE 269
V+SFG+++ E FT G + P + V + L +E
Sbjct: 242 VWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKPA 282
Query: 270 QCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 283 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 41/273 (15%)
Query: 49 AMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHG 106
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY G
Sbjct: 56 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 115
Query: 107 SLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHCDL 151
+L +YL Y N + + F+ L + +A +EYL S + IH DL
Sbjct: 116 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDL 172
Query: 152 KPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDV 210
NVL+ +N V ++DF +A+ + +Y T L + +APE + DV
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQSDV 231
Query: 211 YSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQ 270
+SFG+++ E FT G + P + V + L +E
Sbjct: 232 WSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKPAN 272
Query: 271 CVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 273 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 41/273 (15%)
Query: 49 AMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHG 106
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY G
Sbjct: 113 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 107 SLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHCDL 151
+L +YL Y N + + F+ L + +A +EYL S + IH DL
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDL 229
Query: 152 KPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDV 210
NVL+ +N V ++DF +A+ + +Y T L + +APE + DV
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQSDV 288
Query: 211 YSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQ 270
+SFG+++ E FT G + P + V + L +E
Sbjct: 289 WSFGVLMWEIFT-----------------LGGS--PYPGIPVEELFKLLKEGHRMDKPAN 329
Query: 271 CVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 330 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL YS N +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 241 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 289
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 290 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 340
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 341 KQLVEDLDRI 350
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 120/267 (44%), Gaps = 42/267 (15%)
Query: 52 VAVKVFNLQC-GRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K + G + F E + ++H N++ ++ + ++ +++ Y HG L +
Sbjct: 42 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 111 YLYSSNCILDIFQR---------------LNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
+L + D+ ++++ +A+ +EYL S V+H DL N
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRN 158
Query: 156 VLLDDNMVAHLSDFSIAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFG 214
VL+ D + +SD + + + +Y + +L I +APE G+ S + D++S+G
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLL-GNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 217
Query: 215 IMLMETFTRKKPTDEIFNREMTLKHWG-NNWLPISTMEVVDANLLSQEDIHFVAKEQCVS 273
++L E F+ +G + S +VV+ ++ + + C +
Sbjct: 218 VVLWEVFS-----------------YGLQPYCGYSNQDVVE--MIRNRQV-LPCPDDCPA 257
Query: 274 FVFNLAIECTVESPEQRINAREIVAKL 300
+V+ L IEC E P +R ++I ++L
Sbjct: 258 WVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 173
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 174 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 232
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 233 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 273
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 274 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 200 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 248
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 249 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 300 KQLVEDLDRI 309
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 102
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 103 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 158 DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 216
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 217 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 258
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 259 VQCWAHKPEDR 269
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL YS N +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 193 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 241
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 242 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 292
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 293 KQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL YS N +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 192 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 240
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 241 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 291
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 292 KQLVEDLDRI 301
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 120/267 (44%), Gaps = 42/267 (15%)
Query: 52 VAVKVFNLQC-GRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K + G + F E + ++H N++ ++ + ++ +++ Y HG L +
Sbjct: 59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 111 YLYSSNCILDIFQR---------------LNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
+L + D+ ++++ +A+ +EYL S V+H DL N
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRN 175
Query: 156 VLLDDNMVAHLSDFSIAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFG 214
VL+ D + +SD + + + +Y + +L I +APE G+ S + D++S+G
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLL-GNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 234
Query: 215 IMLMETFTRKKPTDEIFNREMTLKHWG-NNWLPISTMEVVDANLLSQEDIHFVAKEQCVS 273
++L E F+ +G + S +VV+ ++ + + C +
Sbjct: 235 VVLWEVFS-----------------YGLQPYCGYSNQDVVE--MIRNRQV-LPCPDDCPA 274
Query: 274 FVFNLAIECTVESPEQRINAREIVAKL 300
+V+ L IEC E P +R ++I ++L
Sbjct: 275 WVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL YS N +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 189 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 237
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 238 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 288
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 289 KQLVEDLDRI 298
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 92
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 206
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 207 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 248
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 249 VQCWAHKPEDR 259
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 200 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 248
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 249 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 300 KQLVEDLDRI 309
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 92
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 206
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 207 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 248
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 249 VQCWAHKPEDR 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 240
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 241 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 281
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 240
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 241 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 281
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 38 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 96
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 97 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 152 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 210
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 211 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 252
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 253 VQCWAHKPEDR 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 38 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 96
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 97 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 152 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 210
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 211 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 252
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 253 VQCWAHKPEDR 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 39/274 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGD 209
DL NVL+ +N V ++DF +A+ + T + +APE + D
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 210 VYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE 269
V+SFG+++ E FT G + P + V + L +E
Sbjct: 242 VWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKPA 282
Query: 270 QCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 283 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 51 EVAVKVFNLQCGRA---FKSFNIECEMMKSIRHRNLIKVISTCSNE----EFKALVLEYM 103
+VAVKV R + F E + ++ H ++ V T E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+L +++ + + I + +A A + L+F + +IH D+KP N+L+
Sbjct: 99 DGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSHQNGIIHRDVKPANILISATNA 154
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ DF IA+ + S+ QT + T ++PE R DVYS G +L E T
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 223 RKKPTDEIFNREMTLKHWGNNWLPIST 249
+ P + +H + +P S
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 32/251 (12%)
Query: 47 SSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 103
+ VAVK L A F E M S+ HRNLI++ K +V E
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 102
Query: 104 PHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
P GSL L + + +L R + VA + YL S + IH DL N+LL
Sbjct: 103 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 162 MVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + DF + + L ++ M + + + C APE + S D + FG+ L E
Sbjct: 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC-APESLKTRTFSHASDTWMFGVTLWE 216
Query: 220 TFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLA 279
FT + +E W+ ++ +++ + + +E E C ++N+
Sbjct: 217 MFT--------YGQE--------PWIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVM 258
Query: 280 IECTVESPEQR 290
++C PE R
Sbjct: 259 VQCWAHKPEDR 269
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 118
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 119 LD---IFQRL-NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
+ F+ L + +A +EYL S + IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG+++ E FT
Sbjct: 207 INNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL---------- 255
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 256 -------GGS--PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 307 KQLVEDLDRI 316
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 65 FKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
F+ F E +M ++ H N++K+ N +V+E++P G L L + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDN--MVAHLSDFSIAKL----- 174
L +M+D+A +EY+ + ++H DL+ N+ L D+N + A ++DF +++
Sbjct: 125 LRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV 183
Query: 175 --LTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFN 232
L G +Q M TIG Y K D YSF ++L T + P DE
Sbjct: 184 SGLLGNFQWMAPE----TIGAEEESYTEKA------DTYSFAMILYTILTGEGPFDE--- 230
Query: 233 REMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRIN 292
S ++ N++ +E + E C + N+ C P++R +
Sbjct: 231 --------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 293 AREIVAKL 300
IV +L
Sbjct: 277 FSYIVKEL 284
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M + H +K+ ++E L Y +G L KY+ + R +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 145
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + + T
Sbjct: 146 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
++PE + + D+++ G ++ +
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQ 231
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 42/248 (16%)
Query: 65 FKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
F+ F E +M ++ H N++K+ N +V+E++P G L L + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDN--MVAHLSDFSIAKL----- 174
L +M+D+A +EY+ + ++H DL+ N+ L D+N + A ++DF ++
Sbjct: 125 LRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV 183
Query: 175 --LTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFN 232
L G +Q M TIG Y K D YSF ++L T + P DE
Sbjct: 184 SGLLGNFQWMAPE----TIGAEEESYTEKA------DTYSFAMILYTILTGEGPFDE--- 230
Query: 233 REMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRIN 292
S ++ N++ +E + E C + N+ C P++R +
Sbjct: 231 --------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 293 AREIVAKL 300
IV +L
Sbjct: 277 FSYIVKEL 284
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 38/249 (15%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL +S N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 175 LTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNRE 234
+ T + +APE + DV+SFG++L E FT
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------ 247
Query: 235 MTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAR 294
G + P + V + L +E C + ++ + +C P QR +
Sbjct: 248 -----LGGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 295 EIVAKLFKI 303
++V L +I
Sbjct: 301 QLVEDLDRI 309
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 23/192 (11%)
Query: 48 SAMEVAVKVFNLQCGRAFK---SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
+ +VAVK+ N Q R+ E + +K RH ++IK+ S +V+EY+
Sbjct: 40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA 164
G L Y+ N LD + + + S ++Y H V+H DLKP NVLLD +M A
Sbjct: 100 GGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNA 155
Query: 165 HLSDFSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRK----GR--ESTNGDVYSFGIML 217
++DF ++ +++ GE+ + C +P Y GR D++S G++L
Sbjct: 156 KIADFGLSNMMSDGEFLRXS---------CGSPNYAAPEVISGRLYAGPEVDIWSSGVIL 206
Query: 218 METFTRKKPTDE 229
P D+
Sbjct: 207 YALLCGTLPFDD 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL Y N +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 185 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 233
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 234 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 284
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 285 KQLVEDLDRI 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 71 ECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 120
E EMMK I +H+N+I ++ C+ + +++EY G+L +YL Y N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 121 IFQRL------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL 174
++L + VA +EYL S + IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 175 LTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNR 233
+ +Y T L + +APE + DV+SFG++L E FT
Sbjct: 200 IHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------- 248
Query: 234 EMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINA 293
G + P + V + L +E C + ++ + +C P QR
Sbjct: 249 -------GGS--PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF 299
Query: 294 REIVAKLFKI 303
+++V L +I
Sbjct: 300 KQLVEDLDRI 309
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++ Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 240
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 241 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 281
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 48 SAMEVAVKVFNLQCGRAFK---SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
+ +VAVK+ N Q R+ E + +K RH ++IK+ S +V+EY+
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA 164
G L Y+ + ++ R + + SA++Y H V+H DLKP NVLLD +M A
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNA 150
Query: 165 HLSDFSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRK----GR--ESTNGDVYSFGIML 217
++DF ++ +++ GE+ + C +P Y GR D++S G++L
Sbjct: 151 KIADFGLSNMMSDGEFLRTS---------CGSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
Query: 218 METFTRKKPTDE 229
P D+
Sbjct: 202 YALLCGTLPFDD 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLE 109
VAVK + F E +++K++ ++K +S + LV+EY+P G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L LD + L + +EYL S + +H DL N+L++ ++DF
Sbjct: 102 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 158
Query: 170 SIAKLLTGEYQ-SMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+AKLL + + + + I APE S DV+SFG++L E FT
Sbjct: 159 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 29/276 (10%)
Query: 52 VAVKVFNLQC-GRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K+ + G E E +K++RH+++ ++ +VLEY P G L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
Y+ S + + + R+ + + SA+ Y+H S H DLKP N+L D+ L DF
Sbjct: 98 YIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFG 153
Query: 171 IAKLLTGEYQSMTQTQTLATIGCIAPEY-RRKGRESTNGDVYSFGIMLMETFTRKKPTDE 229
+ G QT ++ APE + K + DV+S GI+L P D+
Sbjct: 154 LCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
Query: 230 -----IFNREMTLKHWGNNWLPIST------MEVVDA-------NLLSQ----EDIHFVA 267
++ + M K+ WL S+ M VD NLL+ +D ++
Sbjct: 213 DNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPV 272
Query: 268 KEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
+ Q + +L +C E N R+ + L +
Sbjct: 273 EWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDLISL 308
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLE 109
VAVK + F E +++K++ ++K +S LV+EY+P G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L LD + L + +EYL S + +H DL N+L++ ++DF
Sbjct: 99 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 155
Query: 170 SIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+AKLL + + + + I APE S DV+SFG++L E FT
Sbjct: 156 GLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 47 SSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 104
A+ VAVK+ + E EMMK I +H+N+I ++ C+ + +++ Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 105 HGSLEKYL-----------YSSNCILD---IFQRL-NIMIDVASALEYLHFGYSAQVIHC 149
G+L +YL Y N + + F+ L + +A +EYL S + IH
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHR 181
Query: 150 DLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL NVL+ +N V ++DF +A+ + +Y T L + +APE +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-VKWMAPEALFDRVYTHQS 240
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG+++ E FT G + P + V + L +E
Sbjct: 241 DVWSFGVLMWEIFTL-----------------GGS--PYPGIPVEELFKLLKEGHRMDKP 281
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI 303
C + ++ + +C P QR +++V L +I
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLE 109
VAVK + F E +++K++ ++K +S + LV+EY+P G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L LD + L + +EYL S + +H DL N+L++ ++DF
Sbjct: 115 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 171
Query: 170 SIAKLLTGEYQ-SMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+AKLL + + + + I APE S DV+SFG++L E FT
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKV--ISTCSNEEFKALVLEYMPHGSLE 109
VAVK + F E +++K++ ++K +S + LV+EY+P G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+L LD + L + +EYL S + +H DL N+L++ ++DF
Sbjct: 103 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 159
Query: 170 SIAKLLTGEYQ-SMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+AKLL + + + + I APE S DV+SFG++L E FT
Sbjct: 160 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 119
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 48 SAMEVAVKVFNLQCGRAFK---SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
+ +VAVK+ N Q R+ E + +K RH ++IK+ S +V+EY+
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA 164
G L Y+ + ++ R + + SA++Y H V+H DLKP NVLLD +M A
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNA 150
Query: 165 HLSDFSIAKLLT-GEYQSMTQTQTLATIGCIAPEYRRK----GR--ESTNGDVYSFGIML 217
++DF ++ +++ GE+ + C +P Y GR D++S G++L
Sbjct: 151 KIADFGLSNMMSDGEFLRDS---------CGSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
Query: 218 METFTRKKPTDE 229
P D+
Sbjct: 202 YALLCGTLPFDD 213
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 114 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 115
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 116 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 119
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 125
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 126 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H DL N ++ +
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 163
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 224 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 264
Query: 282 CTVESPEQRINAREIV 297
C +P+ R EIV
Sbjct: 265 CWQFNPKMRPTFLEIV 280
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 282 CTVESPEQRINAREIV 297
C +P+ R EIV
Sbjct: 268 CWQFNPKMRPTFLEIV 283
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 133
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 134 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 46 ISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ EVA++ NLQ + E +M+ ++ N++ + + + +V+EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
GSL + + C +D Q + + ALE+LH S QVIH D+K N+LL +
Sbjct: 102 GSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVK 156
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
L+DF +T E +++ + T +APE + D++S GIM +E +
Sbjct: 157 LTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 226 P 226
P
Sbjct: 215 P 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 135
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 135
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 477
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 478 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++M+ + H L+ + + +EE +V++ + G L +L + + +L + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICE 123
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA- 189
+ AL+YL + ++IH D+KP N+LLD++ H++DF+IA +L E TQ T+A
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAG 176
Query: 190 TIGCIAPEY---RRKGRESTNGDVYSFGIMLMETFTRKKP 226
T +APE R+ S D +S G+ E ++P
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 478
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTG-EYQSMTQTQTLA 189
V+ ++YL + +H DL NVLL A +SDF ++K L E QT
Sbjct: 479 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
+ APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 282 CTVESPEQRINAREIV 297
C +P R EIV
Sbjct: 268 CWQFNPNMRPTFLEIV 283
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 39 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 98
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 155
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 257
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +F L C +P+ R + EI++ + + + R V
Sbjct: 258 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 138
+H N++ ++ C++ ++ EY +G L +L + +L+ I AS + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 139 HFGYSAQV------------IHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
HF S+QV IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 168 HF--SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+S+GI+L E F+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 46 ISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ EVA++ NLQ + E +M+ ++ N++ + + + +V+EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
GSL + + C +D Q + + ALE+LH S QVIH D+K N+LL +
Sbjct: 102 GSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVK 156
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
L+DF +T E QS T + T +APE + D++S GIM +E +
Sbjct: 157 LTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 226 P 226
P
Sbjct: 215 P 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 282 CTVESPEQRINAREIV 297
C +P+ R EIV
Sbjct: 268 CWQFNPKMRPTFLEIV 283
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 52 VAVKVFNLQCGRAFKS-FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK+ + ++ F E +M + N++K++ C+ + L+ EYM +G L +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 111 YLYS-----------------------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVI 147
+L S L ++L I VA+ + YL + +
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV 196
Query: 148 HCDLKPINVLLDDNMVAHLSDFSIAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGREST 206
H DL N L+ +NMV ++DF +++ + + +Y + I + PE R +T
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI-PIRWMPPESIFYNRYTT 255
Query: 207 NGDVYSFGIMLMETFT 222
DV+++G++L E F+
Sbjct: 256 ESDVWAYGVVLWEIFS 271
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 46 ISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ EVA++ NLQ + E +M+ ++ N++ + + + +V+EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
GSL + + C +D Q + + ALE+LH S QVIH D+K N+LL +
Sbjct: 102 GSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVK 156
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
L+DF +T E ++ + T +APE + D++S GIM +E +
Sbjct: 157 LTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 226 P 226
P
Sbjct: 215 P 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 46 ISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ EVA++ NLQ + E +M+ ++ N++ + + + +V+EY+
Sbjct: 43 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
GSL + + C +D Q + + ALE+LH S QVIH D+K N+LL +
Sbjct: 103 GSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVK 157
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
L+DF +T E ++ + T +APE + D++S GIM +E +
Sbjct: 158 LTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 226 P 226
P
Sbjct: 216 P 216
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 282 CTVESPEQRINAREIV 297
C +P+ R EIV
Sbjct: 268 CWQFNPKMRPTFLEIV 283
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H DL N ++ +
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 165
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 226 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 266
Query: 282 CTVESPEQRINAREIV 297
C +P+ R EIV
Sbjct: 267 CWQFNPKMRPTFLEIV 282
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 67 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 126
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 183
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 184 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 243
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 244 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 285
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +F L C +P+ R + EI++ + + + R V
Sbjct: 286 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 32 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 91
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 148
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 149 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 250
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +F L C +P+ R + EI++ + + + R V
Sbjct: 251 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 36 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 95
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 152
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 153 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 212
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 213 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 254
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +F L C +P+ R + EI++ + + + R V
Sbjct: 255 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 296
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 32/270 (11%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 111 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S +N +L + + + + ++A + YL+ + + +H DL N ++ ++
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 168
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + ++PE + G +T DV+SFG++L E
Sbjct: 169 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
T + + + E L+ V++ LL + D C +F L
Sbjct: 229 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 269
Query: 282 CTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +P+ R + EI++ + + + R V
Sbjct: 270 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 35 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 94
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 151
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 152 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 211
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 212 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 253
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +F L C +P+ R + EI++ + + + R V
Sbjct: 254 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 295
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 32/270 (11%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 111 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S +N +L + + + + ++A + YL+ + + +H DL N ++ ++
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 167
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + ++PE + G +T DV+SFG++L E
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
T + + + E L+ V++ LL + D C +F L
Sbjct: 228 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 268
Query: 282 CTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +P+ R + EI++ + + + R V
Sbjct: 269 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 32/270 (11%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 111 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S +N +L + + + + ++A + YL+ + + +H DL N ++ ++
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 167
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + ++PE + G +T DV+SFG++L E
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
T + + + E L+ V++ LL + D C +F L
Sbjct: 228 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 268
Query: 282 CTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +P+ R + EI++ + + + R V
Sbjct: 269 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 29 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 87
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H + ++H DLK N+LLD +M
Sbjct: 88 ASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADM 143
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPE-YRRKGRESTNGDVYSFGIMLMET 220
++DF + E+ + T + APE ++ K + DV+S G++L
Sbjct: 144 NIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 199
Query: 221 FTRKKPTD 228
+ P D
Sbjct: 200 VSGSLPFD 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 32/270 (11%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 111 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S +N +L + + + + ++A + YL+ + + +H DL N ++ ++
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + ++PE + G +T DV+SFG++L E
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
T + + + E L+ V++ LL + D C +F L
Sbjct: 235 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 275
Query: 282 CTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +P+ R + EI++ + + + R V
Sbjct: 276 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 48 SAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
+ EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYAS 97
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA 164
G + YL + + + R + SA++Y H Y ++H DLK N+LLD +M
Sbjct: 98 GGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNI 153
Query: 165 HLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPE-YRRKGRESTNGDVYSFGIMLMETFT 222
++DF + E+ + T + APE ++ K + DV+S G++L +
Sbjct: 154 KIADFG----FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 223 RKKPTD 228
P D
Sbjct: 210 GSLPFD 215
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 45 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 161
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 263
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C +F L C +P+ R + EI++ + + + R V
Sbjct: 264 -NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 46 ISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+++ EVA++ NLQ + E +M+ ++ N++ + + + +V+EY+
Sbjct: 43 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
GSL + + C +D Q + + ALE+LH S QVIH ++K N+LL +
Sbjct: 103 GSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVK 157
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
L+DF +T E QS T + T +APE + D++S GIM +E +
Sbjct: 158 LTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 226 P 226
P
Sbjct: 216 P 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
H ++I +I + + F LV + M G L YL + L + +IM + A+ +LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPEY 198
+ ++H DLKP N+LLDDNM LSDF + L GE + T G +APE
Sbjct: 218 ---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEI 270
Query: 199 RRKGRESTNG------DVYSFGIMLMETFTRKKP 226
+ + T+ D+++ G++L P
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 19 FRRSQTSDFQILNFFICGVIIPVAQFLISS---AMEVAVKVFNLQCGRAFK-SFNIECEM 74
F R ++L G ++ + IS +++VAVK+ + + + + E +M
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 75 MKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-------------YSSNCILD 120
M + H N++ ++ C+ L+ EY +G L YL Y + L+
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 121 IFQRLNIMI---------DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ LN++ VA +E+L F +H DL NVL+ V + DF +
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 172 AKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
A+ + + + + + +APE +G + DV+S+GI+L E F+
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 30 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 89
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 146
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N ++ ++ + DF + + + + L + ++PE + G +T
Sbjct: 147 RDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 206
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 207 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 248
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C + L C +P+ R + EI++ + + + R V
Sbjct: 249 -NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 290
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H + ++H DLK N+LLD +M
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPE-YRRKGRESTNGDVYSFGIMLMET 220
++DF + E+ + T + APE ++ K + DV+S G++L
Sbjct: 151 NIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 221 FTRKKPTD 228
+ P D
Sbjct: 207 VSGSLPFD 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 138
+H N++ ++ C++ ++ EY +G L +L + +L+ I S + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 139 HFGYSAQV------------IHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
HF S+QV IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 168 HF--SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+S+GI+L E F+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H + ++H DLK N+LLD +M
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPE-YRRKGRESTNGDVYSFGIMLMET 220
++DF + E+ + T + APE ++ K + DV+S G++L
Sbjct: 151 NIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 221 FTRKKPTD 228
+ P D
Sbjct: 207 VSGSLPFD 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVA+K+ + L K F E +MK + H N++K+ E+ L++EY
Sbjct: 34 ILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 92
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H +++H DLK N+LLD +M
Sbjct: 93 ASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHRDLKAENLLLDADM 148
Query: 163 VAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLME 219
++DF + T G+ + + A APE ++ K + DV+S G++L
Sbjct: 149 NIKIADFGFSNEFTVGGKLDTFCGSPPYA-----APELFQGKKYDGPEVDVWSLGVILYT 203
Query: 220 TFTRKKPTD 228
+ P D
Sbjct: 204 LVSGSLPFD 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVA+K+ + L K F E +MK + H N++K+ E+ L++EY
Sbjct: 37 ILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H +++H DLK N+LLD +M
Sbjct: 96 ASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHRDLKAENLLLDADM 151
Query: 163 VAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLME 219
++DF + T G+ + A APE ++ K + DV+S G++L
Sbjct: 152 NIKIADFGFSNEFTVGGKLDAFCGAPPYA-----APELFQGKKYDGPEVDVWSLGVILYT 206
Query: 220 TFTRKKPTD 228
+ P D
Sbjct: 207 LVSGSLPFD 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H +L N ++ +
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 167
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 227
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 228 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 268
Query: 282 CTVESPEQRINAREIV 297
C +P R EIV
Sbjct: 269 CWQFNPNMRPTFLEIV 284
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 115
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 173
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 32/256 (12%)
Query: 52 VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 111 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDN 161
YL S + + + + ++A + YL+ + + +H +L N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 166
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETF 221
+ DF + + + + L + +APE + G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 222 TRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIE 281
+ + + + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 282 CTVESPEQRINAREIV 297
C +P R EIV
Sbjct: 268 CWQFNPNMRPTFLEIV 283
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 69 NIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 128
N E M+ + H +I++ T + + ++++Y+ G L L S + +
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YA 112
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
+V ALEYLH S +I+ DLKP N+LLD N ++DF AK Y
Sbjct: 113 AEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYXLC 164
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T IAPE + + D +SFGI++ E P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 74 MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 133
++K+++H L+ + + + VL+Y+ G L +L C L+ R ++AS
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIAS 150
Query: 134 ALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGC 193
AL YLH S +++ DLKP N+LLD L+DF + K E+ S T T T
Sbjct: 151 ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTST-FCGTPEY 205
Query: 194 IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP---------TDEIFNREMTLK 238
+APE K D + G +L E P D I N+ + LK
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +K +RH ++IK+ + +V+EY G L Y+ + + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGR-RFFQQ 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ A+EY H +++H DLKP N+LLDDN+ ++DF ++ + MT L T
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNI-------MTDGNFLKT 166
Query: 191 IGCIAPEYRRKGRESTNG--------DVYSFGIMLMETFTRKKPTDEIF 231
C +P Y E NG DV+S GI+L + P D+ F
Sbjct: 167 -SCGSPNY--AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAV++ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 36 ILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H + ++H DLK N+LLD +M
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPE-YRRKGRESTNGDVYSFGIMLMET 220
++DF + E+ + T + APE ++ K + DV+S G++L
Sbjct: 151 NIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 221 FTRKKPTD 228
+ P D
Sbjct: 207 VSGSLPFD 214
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 115
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 173
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+V+EY GS+ + N L + I+ LEYLHF + IH D+K N+L
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNIL 157
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L+ A L+DF +A LT + + T +APE ++ + D++S GI
Sbjct: 158 LNTEGHAKLADFGVAGQLTDXM--AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITA 215
Query: 218 METFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 277
+E K P +I P+ + ++ N F E +
Sbjct: 216 IEMAEGKPPYADIH--------------PMRAIFMIPTNPPPT----FRKPELWSDNFTD 257
Query: 278 LAIECTVESPEQRINAREIVAKLF 301
+C V+SPEQR A +++ F
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPF 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H + ++H DLK N+LLD +M
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEY------RRKGRESTNGDVYSFGIM 216
++DF + T L C AP Y + K + DV+S G++
Sbjct: 151 NIKIADFGFS-------NEFTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 217 LMETFTRKKPTD 228
L + P D
Sbjct: 203 LYTLVSGSLPFD 214
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 27/255 (10%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
+ +VAVK +L+ + + E +M+ H N++ + S+ + +V+E++ G+
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L + ++ ++ Q + + V AL YLH + VIH D+K ++LL + LS
Sbjct: 129 LTDIV--THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLS 183
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPT 227
DF ++ E + + T +APE + T D++S GIM++E + P
Sbjct: 184 DFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP- 240
Query: 228 DEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVES 286
FN P+ M + +L + +D+H V+ + +L + V
Sbjct: 241 --YFNEP-----------PLQAMRRIRDSLPPRVKDLHKVSS--VLRGFLDLML---VRE 282
Query: 287 PEQRINAREIVAKLF 301
P QR A+E++ F
Sbjct: 283 PSQRATAQELLGHPF 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 109
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 167
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 112
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 170
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ VAVK C K F E +MK++ H +++K+I EE +++E P+
Sbjct: 34 GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPY 92
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L YL + L + + + + A+ YL S +H D+ N+L+
Sbjct: 93 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVK 149
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RK 224
L DF +++ + E + T I ++PE R +T DV+ F + + E + K
Sbjct: 150 LGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
+P + N+++ I +E D L + D+ C ++ L C
Sbjct: 209 QPFFWLENKDV-----------IGVLEKGDR--LPKPDL-------CPPVLYTLMTRCWD 248
Query: 285 ESPEQRINAREIVAKL 300
P R E+V L
Sbjct: 249 YDPSDRPRFTELVCSL 264
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 71 ECEMMKSIRHRNLIKVI----STCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQR 124
E +++K +H N+I + T EFK++ VL+ M L + ++SS L +
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHV 160
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLL---TGEYQS 181
+ + L+Y+H SAQVIH DLKP N+L+++N + DF +A+ L E+Q
Sbjct: 161 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 182 MTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRKK 225
T+ +AT APE E T D++S G + E R++
Sbjct: 218 FM-TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ VAVK C K F E +MK++ H +++K+I EE +++E P+
Sbjct: 38 GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPY 96
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L YL + L + + + + A+ YL S +H D+ N+L+
Sbjct: 97 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVK 153
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RK 224
L DF +++ + E + T I ++PE R +T DV+ F + + E + K
Sbjct: 154 LGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
+P + N+++ I +E D L + D+ C ++ L C
Sbjct: 213 QPFFWLENKDV-----------IGVLEKGDR--LPKPDL-------CPPVLYTLMTRCWD 252
Query: 285 ESPEQRINAREIVAKL 300
P R E+V L
Sbjct: 253 YDPSDRPRFTELVCSL 268
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 27/251 (10%)
Query: 52 VAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
VAVK C K F E +MK++ H +++K+I EE +++E P+G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGH 113
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
YL + L + + + + A+ YL S +H D+ N+L+ L DF
Sbjct: 114 YLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFG 170
Query: 171 IAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDE 229
+++ + E + T I ++PE R +T DV+ F + + E + K+P
Sbjct: 171 LSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 229
Query: 230 IFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQ 289
+ N+++ I +E D L + D+ C ++ L C P
Sbjct: 230 LENKDV-----------IGVLEKGDR--LPKPDL-------CPPVLYTLMTRCWDYDPSD 269
Query: 290 RINAREIVAKL 300
R E+V L
Sbjct: 270 RPRFTELVCSL 280
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 71 ECEMMKSIRHRNLIKVI----STCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQR 124
E +++K +H N+I + T EFK++ VL+ M L + ++SS L +
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHV 161
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLL---TGEYQS 181
+ + L+Y+H SAQVIH DLKP N+L+++N + DF +A+ L E+Q
Sbjct: 162 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 182 MTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRKK 225
T+ +AT APE E T D++S G + E R++
Sbjct: 219 FM-TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 120/283 (42%), Gaps = 34/283 (12%)
Query: 41 VAQFLISSAME--VAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
VA+ ++ E VA+K N R F E +MK ++++++ S +
Sbjct: 32 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 91
Query: 98 LVLEYMPHGSLEKYLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGYSAQVIH 148
+++E M G L+ YL S +N +L + + + + ++A + YL+ + + +H
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 148
Query: 149 CDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG 208
DL N + ++ + DF + + + + L + ++PE + G +T
Sbjct: 149 RDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 209 DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAK 268
DV+SFG++L E T + + + E L+ V++ LL + D
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD------ 250
Query: 269 EQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDSLLRNV 311
C + L C +P+ R + EI++ + + + R V
Sbjct: 251 -NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ + H N+I ++ ++ +LV ++M LE + ++ +L M+
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
LEYLH + ++H DLKP N+LLD+N V L+DF +AK ++ + T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVT 175
Query: 191 IGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTR 223
APE R G D+++ G +L E R
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ + H+N+++ I + ++LE M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 172
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 173 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 233 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 266
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 267 PPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 30/211 (14%)
Query: 22 SQTSDFQILNFFICGVIIPVAQFL-ISSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSI 78
S T ++Q+ G V + + I + E A K+ N + R + E + + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLNIMI 129
+H N++++ + S E F LV + + G L + YS S+CI I + +N
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--- 117
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
+ H ++H DLKP N+LL L+DF +A + G+ Q+
Sbjct: 118 -------HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T G ++PE RK D+++ G++L
Sbjct: 168 --GTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G + K L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITE 121
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVIST---CSNEEFK-ALVLEYMPHGS 107
VAVK+F LQ ++++S E ++H NL++ I+ SN E + L+ + GS
Sbjct: 41 VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGS 99
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF--------GYSAQVIHCDLKPINVLLD 159
L YL + I+ + ++ ++ L YLH G+ + H D K NVLL
Sbjct: 100 LTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLK 157
Query: 160 DNMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPEYRRKG----RES-TNGDVYSF 213
++ A L+DF +A + G+ T Q + T +APE R++ D+Y+
Sbjct: 158 SDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEVLEGAINFQRDAFLRIDMYAM 216
Query: 214 GIMLMETFTRKKPTD 228
G++L E +R K D
Sbjct: 217 GLVLWELVSRCKAAD 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+++EY+ GS L + D FQ ++ ++ L+YLH S + IH D+K NVL
Sbjct: 98 IIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVL 152
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L + L+DF +A LT + + + T +APE ++ + D++S GI
Sbjct: 153 LSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 210
Query: 218 METFTRKKPTDEI 230
+E + P ++
Sbjct: 211 IELAKGEPPNSDM 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ + H+N+++ I + ++LE M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 186
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 247 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 280
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 281 PPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 30/211 (14%)
Query: 22 SQTSDFQILNFFICGVIIPVAQFL-ISSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSI 78
S T ++Q+ G V + + I + E A K+ N + R + E + + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLNIMI 129
+H N++++ + S E F LV + + G L + YS S+CI I + +N
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--- 117
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
+ H ++H DLKP N+LL L+DF +A + G+ Q+
Sbjct: 118 -------HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T G ++PE RK D+++ G++L
Sbjct: 168 --GTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+++EY+ GS L LD Q I+ ++ L+YLH S + IH D+K NVL
Sbjct: 82 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L ++ L+DF +A LT + + + T +APE ++ + D++S GI
Sbjct: 137 LSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 218 METFTRKKPTDEI 230
+E + P E+
Sbjct: 195 IELARGEPPHSEL 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T+ T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAV++ + L K F E +MK + H N++K+ E+ LV+EY
Sbjct: 36 ILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + + R + SA++Y H + ++H DLK N+LLD +M
Sbjct: 95 ASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADM 150
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLMETF 221
++DF + T + + APE ++ K + DV+S G++L
Sbjct: 151 NIKIADFGFSNEFT---FGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Query: 222 TRKKPTD 228
+ P D
Sbjct: 208 SGSLPFD 214
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 24 TSDFQILNFFICGVIIPVAQFLISSA-MEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRH 80
T D+Q+ G V + + + E A K+ N + R + E + + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 81 RNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 131
N++++ + S E F LV + + G L + YS S+CI I + +N
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN----- 144
Query: 132 ASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
++H ++H DLKP N+LL L+DF +A + GE Q+
Sbjct: 145 -----HIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA-- 194
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T G ++PE RK D+++ G++L
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+++EY+ GS L LD Q I+ ++ L+YLH S + IH D+K NVL
Sbjct: 82 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L ++ L+DF +A LT + + + T +APE ++ + D++S GI
Sbjct: 137 LSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 218 METFTRKKPTDEI 230
+E + P E+
Sbjct: 195 IELARGEPPHSEL 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+++EY+ GS L LD Q I+ ++ L+YLH S + IH D+K NVL
Sbjct: 97 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 151
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L ++ L+DF +A LT + + + T +APE ++ + D++S GI
Sbjct: 152 LSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209
Query: 218 METFTRKKPTDEI 230
+E + P E+
Sbjct: 210 IELARGEPPHSEL 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++KS+ H N+IK+ ++++ LV E+ G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQ 154
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDN---MVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ S + YLH ++H D+KP N+LL++ + + DF ++ + +Y+ +
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--- 208
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L T IAPE +K + + DV+S G+++
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIM 237
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 109
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 110 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 163
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 164 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 223
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 224 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 257
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 258 PPKNCPGPVYRIMTQCWQHQPEDRPN 283
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+++EY+ GS L LD Q I+ ++ L+YLH S + IH D+K NVL
Sbjct: 102 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 156
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L ++ L+DF +A LT + + + T +APE ++ + D++S GI
Sbjct: 157 LSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 214
Query: 218 METFTRKKPTDEI 230
+E + P E+
Sbjct: 215 IELARGEPPHSEL 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 23 QTSDFQILNFFICGVIIPVAQF-LISSAMEVAVKVFNLQC-------GRAFKSFNIECEM 74
+ DF++ N G V + I + +EVA+K+ + + R I C++
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
+H +++++ + + + LVLE +G + +YL + + + M + +
Sbjct: 69 ----KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGC 193
+ YLH S ++H DL N+LL NM ++DF +A L ++ + TL T
Sbjct: 125 MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---KHYTLCGTPNY 178
Query: 194 IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
I+PE + DV+S G M + P D
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA +E+L S + IH DL N+LL +N V + DF +A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTM 250
+ +APE ST DV+S+G++L E F+ G + P M
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-----------------LGGSPYPGVQM 307
Query: 251 EVVDANLLS--QEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKL 300
D + S +E + A E ++ + ++C P++R E+V KL
Sbjct: 308 ---DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEF 95
G I+ + +FL S ++ K+ A + E +++K +RH NL+ ++ C ++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKI-------AMR----EIKLLKQLRHENLVNLLEVCKKKKR 98
Query: 96 KALVLEYMPHGSLEKY-LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
LV E++ H L+ L+ + + Q+ I + + F +S +IH D+KP
Sbjct: 99 WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----INGIGFCHSHNIIHRDIKPE 153
Query: 155 NVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSF 213
N+L+ + V L DF A+ L + +AT APE + DV++
Sbjct: 154 NILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAI 211
Query: 214 GIMLMETF 221
G ++ E F
Sbjct: 212 GCLVTEMF 219
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 117
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 171
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 231
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 232 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 265
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 266 PPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 135 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 188
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 189 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 248
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 249 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 282
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 283 PPKNCPGPVYRIMTQCWQHQPEDRPN 308
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 172
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 173 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 233 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 266
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 267 PPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL N ++D
Sbjct: 100 YREL-QKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIAD 155
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E P
Sbjct: 156 FGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 178
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 179 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 238
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 239 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 272
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 273 PPKNCPGPVYRIMTQCWQHQPEDRPN 298
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 92
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 93 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 148
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E K P
Sbjct: 149 FG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 165
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 145 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 198
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 199 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 258
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 259 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 292
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 293 PPKNCPGPVYRIMTQCWQHQPEDRPN 318
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 165
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 136 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 189
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 190 LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 249
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 250 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 283
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 284 PPKNCPGPVYRIMTQCWQHQPEDRPN 309
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCG-RAFKSFNIECEMMKSIRHRNLIKVISTCSNEE 94
G+ IP + + + VA+KV +A K E +M + + +++ C
Sbjct: 36 GIWIPDGE---NVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST 92
Query: 95 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
+ LV + MP+G L ++ + L LN + +A + YL +++H DL
Sbjct: 93 VQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAAR 148
Query: 155 NVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFG 214
NVL+ ++DF +A+LL + I +A E + R + DV+S+G
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYG 208
Query: 215 IMLMETFT-RKKPTDEIFNREMT 236
+ + E T KP D I RE+
Sbjct: 209 VTVWELMTFGAKPYDGIPAREIP 231
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 99 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E K P
Sbjct: 155 FG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 50 MEVAVKVFNLQCGRA-FKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++VA+KV +A + E ++M + + ++++I C E LV+E G L
Sbjct: 38 IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPL 96
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
K+L + + ++ V+ ++YL +H DL NVLL + A +SD
Sbjct: 97 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISD 153
Query: 169 FSIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKP 226
F ++K L + T ++ + APE + S+ DV+S+G+ + E + +KP
Sbjct: 154 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
Query: 227 TDEIFNREM 235
++ E+
Sbjct: 214 YKKMKGPEV 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 111
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 110
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 94
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 95 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 150
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E K P
Sbjct: 151 FG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 109
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 118
E ++K + H ++IK+ CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 119 -----------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L + ++ ++ ++YL +++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKIS 192
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-- 225
DF +++ + E + ++Q + +A E +T DV+SFG++L E T
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 226 ----PTDEIFN 232
P + +FN
Sbjct: 253 YPGIPPERLFN 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 170
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 110
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 111
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 100 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 155
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E K P
Sbjct: 156 FG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 112
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 170
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 212
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 213 LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 272
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 273 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 306
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 307 PPKNCPGPVYRIMTQCWQHQPEDRPN 332
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 109
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + ++LE M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 172
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 173 LLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 233 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 266
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 267 PPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G + K L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITE 121
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S + T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 110
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 64
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW 123
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 124 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 230
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 231 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 280
Query: 306 S 306
Sbjct: 281 P 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 172
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 65
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 231
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 232 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
Query: 306 S 306
Sbjct: 282 P 282
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 64
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 123
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 124 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 230
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 231 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 280
Query: 306 S 306
Sbjct: 281 P 281
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 67
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 233
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 234 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 283
Query: 306 S 306
Sbjct: 284 P 284
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 54 VKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLE---K 110
V++F+L +A E +++K + H N+IK ++ + +VLE G L K
Sbjct: 65 VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK 124
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
+ ++ + + SALE++H S +V+H D+KP NV + V L D
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 171 IAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + + ++ + T ++PE + + D++S G +L E + P
Sbjct: 182 LGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 22 SQTSDFQILNFFICGVIIPVAQFL-ISSAMEVAVKVFNLQCGRAFKSFNI-ECEMMKSIR 79
S +S F+ L G V + L ++ + VA+K L S I E +MK ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV---ASALE 136
H N++++ E LV E+M L+KY+ S + + + L + + L+
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFM-DNDLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 137 YLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAP 196
L F + +++H DLKP N+L++ L DF +A+ + + + T+ AP
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYRAP 177
Query: 197 EYRRKGRE-STNGDVYSFGIMLMETFTRKKPTDEIFNREMTLK 238
+ R ST+ D++S G +L E T KP N E LK
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLK 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + +++E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 171
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 231
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 232 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 265
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 266 PPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 118
E ++K + H ++IK+ CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 119 -----------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L + ++ ++ ++YL +++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKIS 192
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-- 225
DF +++ + E + ++Q + +A E +T DV+SFG++L E T
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 226 ----PTDEIFN 232
P + +FN
Sbjct: 253 YPGIPPERLFN 263
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 66
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 232
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 233 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 282
Query: 306 S 306
Sbjct: 283 P 283
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + VA+K + +A K
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKE 63
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 229
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 230 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
Query: 306 S 306
Sbjct: 280 P 280
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVFNLQCGRAFK-SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK C + F +E ++ H+N+++ I + +++E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 132
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 186
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 247 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 280
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 281 PPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 118
E ++K + H ++IK+ CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 119 -----------LDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L + ++ ++ ++YL ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKIS 192
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK-- 225
DF +++ + E + ++Q + +A E +T DV+SFG++L E T
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 226 ----PTDEIFN 232
P + +FN
Sbjct: 253 YPGIPPERLFN 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S +T T
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGT 170
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 70
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 236
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 237 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
Query: 306 S 306
Sbjct: 287 P 287
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL N ++D
Sbjct: 100 YREL-QKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIAD 155
Query: 169 FSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + + ++ TL T+ + PE D++S G++ E P
Sbjct: 156 FGWSV-----HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 113 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 168
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E K P
Sbjct: 169 FG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ + H N++++ + + L+LEY P G L K L S C D + IM +
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEE 131
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A AL Y H +VIH D+KP N+LL ++DF + S+ + T
Sbjct: 132 LADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGT 184
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE + D++ G++ E P
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
Query: 47 SSAMEVAVKVFNLQC-GRAFKSFNIECEM--MKSIRHRNLIKVISTCSNEEFKALVLEYM 103
++ +VA+K+ N + ++ IE E+ ++ +RH ++IK+ +++ +V+EY
Sbjct: 27 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 86
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+ L Y+ + + + R + SA+EY H +++H DLKP N+LLD+++
Sbjct: 87 GN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 141
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG--------DVYSFGI 215
++DF ++ + MT L T C +P Y E +G DV+S G+
Sbjct: 142 VKIADFGLSNI-------MTDGNFLKT-SCGSPNY--AAPEVISGKLYAGPEVDVWSCGV 191
Query: 216 MLMETFTRKKPTDE 229
+L R+ P D+
Sbjct: 192 ILYVMLCRRLPFDD 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
Query: 47 SSAMEVAVKVFNLQC-GRAFKSFNIECEM--MKSIRHRNLIKVISTCSNEEFKALVLEYM 103
++ +VA+K+ N + ++ IE E+ ++ +RH ++IK+ +++ +V+EY
Sbjct: 37 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 96
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+ L Y+ + + + R + SA+EY H +++H DLKP N+LLD+++
Sbjct: 97 GN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 151
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG--------DVYSFGI 215
++DF ++ + MT L T C +P Y E +G DV+S G+
Sbjct: 152 VKIADFGLSNI-------MTDGNFLKT-SCGSPNY--AAPEVISGKLYAGPEVDVWSCGV 201
Query: 216 MLMETFTRKKPTDE 229
+L R+ P D+
Sbjct: 202 ILYVMLCRRLPFDD 215
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 27/289 (9%)
Query: 26 DFQILNFFICGVIIPV-AQFLISSAMEVAVKVFNLQ-CGRAFKSFNIECEMMKSIRHRNL 83
D+++ G V A + +VA+K NL+ C + E + M H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 84 IKVISTCSNEEFKALVLEYMPHGS---LEKYLYSS----NCILDIFQRLNIMIDVASALE 136
+ ++ ++ LV++ + GS + K++ + + +LD I+ +V LE
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 137 YLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGC- 193
YLH IH D+K N+LL ++ ++DF ++ L G+ +T C
Sbjct: 131 YLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 194 IAPEYRRKGREST-NGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEV 252
+APE + R D++SFGI +E T P + ++ + N+ P V
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND-PPSLETGV 246
Query: 253 VDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
D +L + F + +S C + PE+R A E++ F
Sbjct: 247 QDKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELLRHKF 285
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 121/302 (40%), Gaps = 30/302 (9%)
Query: 8 LAFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFK 66
+A IL F++ + G+ IP + + VA+K + +A K
Sbjct: 3 MALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANK 59
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 126
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 60 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 118
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQ 186
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 119 WCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWL 245
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS--------- 226
Query: 246 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-R 304
S +E L Q I C V+ + ++C + + R RE++ + K+ R
Sbjct: 227 --SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 275
Query: 305 DS 306
D
Sbjct: 276 DP 277
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPL-IKSY 107
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
Query: 47 SSAMEVAVKVFNLQC-GRAFKSFNIECEM--MKSIRHRNLIKVISTCSNEEFKALVLEYM 103
++ +VA+K+ N + ++ IE E+ ++ +RH ++IK+ +++ +V+EY
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 90
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+ L Y+ + + + R + SA+EY H +++H DLKP N+LLD+++
Sbjct: 91 GN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 145
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG--------DVYSFGI 215
++DF ++ + MT L T C +P Y E +G DV+S G+
Sbjct: 146 VKIADFGLSNI-------MTDGNFLKT-SCGSPNY--AAPEVISGKLYAGPEVDVWSCGV 195
Query: 216 MLMETFTRKKPTDE 229
+L R+ P D+
Sbjct: 196 ILYVMLCRRLPFDD 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
Query: 47 SSAMEVAVKVFNLQC-GRAFKSFNIECEM--MKSIRHRNLIKVISTCSNEEFKALVLEYM 103
++ +VA+K+ N + ++ IE E+ ++ +RH ++IK+ +++ +V+EY
Sbjct: 36 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
+ L Y+ + + + R + SA+EY H +++H DLKP N+LLD+++
Sbjct: 96 GN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLN 150
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG--------DVYSFGI 215
++DF ++ + MT L T C +P Y E +G DV+S G+
Sbjct: 151 VKIADFGLSNI-------MTDGNFLKT-SCGSPNY--AAPEVISGKLYAGPEVDVWSCGV 200
Query: 216 MLMETFTRKKPTDE 229
+L R+ P D+
Sbjct: 201 ILYVMLCRRLPFDD 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 122 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 177
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S +T T+ + PE D++S G++ E K P
Sbjct: 178 FG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ AM VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 36 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 94
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 95 GELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 151
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 152 LGDFGLSRYMEDSTXXKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 250
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 251 YDPSRRPRFTELKAQLSTI 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S + T
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 27/289 (9%)
Query: 26 DFQILNFFICGVIIPV-AQFLISSAMEVAVKVFNLQ-CGRAFKSFNIECEMMKSIRHRNL 83
D+++ G V A + +VA+K NL+ C + E + M H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 84 IKVISTCSNEEFKALVLEYMPHGS---LEKYLYSS----NCILDIFQRLNIMIDVASALE 136
+ ++ ++ LV++ + GS + K++ + + +LD I+ +V LE
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 137 YLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGC- 193
YLH IH D+K N+LL ++ ++DF ++ L G+ +T C
Sbjct: 136 YLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 194 IAPEYRRKGREST-NGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEV 252
+APE + R D++SFGI +E T P + ++ + N+ + T V
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET-GV 251
Query: 253 VDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
D +L + F + +S C + PE+R A E++ F
Sbjct: 252 QDKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELLRHKF 290
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 63
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW 122
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 229
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 230 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
Query: 306 S 306
Sbjct: 280 P 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++ +I +E LV E+M L+K L + L Q I I
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIY 124
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L + + +++H DLKP N+L++ + L+DF +A+ +S T + T
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 191 IGCIAPEYRRKGRE-STNGDVYSFGIMLMETFTRK 224
+ AP+ ++ ST+ D++S G + E T K
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEM-----MKSIRHRNLIKVISTCS----NEEFK-ALVLE 101
VA+K +Q G + E+ +++ H N++++ C+ + E K LV E
Sbjct: 40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 99
Query: 102 YMPHGSLEKYL-------YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPI 154
++ L YL + I D+ M + L++LH S +V+H DLKP
Sbjct: 100 HVDQ-DLTTYLDKVPEPGVPTETIKDM------MFQLLRGLDFLH---SHRVVHRDLKPQ 149
Query: 155 NVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFG 214
N+L+ + L+DF +A++ + + M T + T+ APE + +T D++S G
Sbjct: 150 NILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 215 IMLMETFTRK 224
+ E F RK
Sbjct: 207 CIFAEMFRRK 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 64 AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 123
++ +E +++ + R ++ + + LV+ M G + ++Y+ + FQ
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 124 RLNIMI---DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQ 180
+ + S LE+LH +I+ DLKP NVLLDD+ +SD +A L
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--- 341
Query: 181 SMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP----TDEIFNREM 235
T+T+ A T G +APE + D ++ G+ L E + P +++ N+E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 64 AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 123
++ +E +++ + R ++ + + LV+ M G + ++Y+ + FQ
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 124 RLNIMI---DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQ 180
+ + S LE+LH +I+ DLKP NVLLDD+ +SD +A L
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--- 341
Query: 181 SMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP----TDEIFNREM 235
T+T+ A T G +APE + D ++ G+ L E + P +++ N+E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSFNIECEM-----MKSIRHRNLIKVISTCS----N 92
A+ L + VA+K +Q G + E+ +++ H N++++ C+ +
Sbjct: 30 ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89
Query: 93 EEFK-ALVLEYMPHGSLEKYL-------YSSNCILDIFQRLNIMIDVASALEYLHFGYSA 144
E K LV E++ L YL + I D+ M + L++LH S
Sbjct: 90 RETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDM------MFQLLRGLDFLH---SH 139
Query: 145 QVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRE 204
+V+H DLKP N+L+ + L+DF +A++ + + M T + T+ APE +
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSY 196
Query: 205 STNGDVYSFGIMLMETFTRK 224
+T D++S G + E F RK
Sbjct: 197 ATPVDLWSVGCIFAEMFRRK 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++ +I +E LV E+M L+K L + L Q I I
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIY 124
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L + + +++H DLKP N+L++ + L+DF +A+ +S T + T
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 191 IGCIAPEYRRKGRE-STNGDVYSFGIMLMETFTRK 224
+ AP+ ++ ST+ D++S G + E T K
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+A+AL Y H S +VIH D+KP N+LL ++DF + + ++ TL
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRDTLCG 169
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T+ + PE D++S G++ E K P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 51 EVAVKVFNLQCGRAFKSFNI---------ECEMMKSIR-HRNLIKVISTCSNEEFKALVL 100
E AVK+ ++ G +F + + E ++++ + H N+I++ T F LV
Sbjct: 31 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 90
Query: 101 EYMPHGSLEKYLYSSNCILDIFQR--LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+ M G L YL + + R + +++V AL L+ ++H DLKP N+LL
Sbjct: 91 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILL 144
Query: 159 DDNMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPE 197
DD+M L+DF + +L GE + T +APE
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPE 180
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 64 AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 123
++ +E +++ + R ++ + + LV+ M G + ++Y+ + FQ
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 124 RLNIMI---DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQ 180
+ + S LE+LH +I+ DLKP NVLLDD+ +SD +A L
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--- 341
Query: 181 SMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP----TDEIFNREM 235
T+T+ A T G +APE + D ++ G+ L E + P +++ N+E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S + T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 63
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 229
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 230 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
Query: 306 S 306
Sbjct: 280 P 280
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 66
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 232
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 233 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 282
Query: 306 S 306
Sbjct: 283 P 283
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + VA+K + +A K
Sbjct: 1 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKE 57
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 58 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 116
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 117 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 223
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 224 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273
Query: 306 S 306
Sbjct: 274 P 274
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 65
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 231
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 232 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
Query: 306 S 306
Sbjct: 282 P 282
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 51 EVAVKVFNLQCGRAFKSFNI---------ECEMMKSIR-HRNLIKVISTCSNEEFKALVL 100
E AVK+ ++ G +F + + E ++++ + H N+I++ T F LV
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 101 EYMPHGSLEKYLYSSNCILDIFQR--LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+ M G L YL + + R + +++V AL L+ ++H DLKP N+LL
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILL 157
Query: 159 DDNMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPE 197
DD+M L+DF + +L GE + T +APE
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPE 193
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 7 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 63
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 229
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 230 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
Query: 306 S 306
Sbjct: 280 P 280
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 66
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 232
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 233 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 282
Query: 306 S 306
Sbjct: 283 P 283
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 64 AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 123
++ +E +++ + R ++ + + LV+ M G + ++Y+ + FQ
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 124 RLNIMI---DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQ 180
+ + S LE+LH +I+ DLKP NVLLDD+ +SD +A L
Sbjct: 288 EPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--- 341
Query: 181 SMTQTQTLA-TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP----TDEIFNREM 235
T+T+ A T G +APE + D ++ G+ L E + P +++ N+E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S + T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 172
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 70
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 236
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 237 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
Query: 306 S 306
Sbjct: 287 P 287
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 99 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S + T+ + PE D++S G++ E K P
Sbjct: 155 FG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLY---------SSNCILDIFQRLNIMI 129
+H N++ ++ C++ ++ EY +G L +L L++ L+
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA 189
VA + +L S IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 160 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+S+GI+L E F+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 13 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 69
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 70 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 128
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 129 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 235
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 236 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 285
Query: 306 S 306
Sbjct: 286 P 286
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 70
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 236
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 237 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
Query: 306 S 306
Sbjct: 287 P 287
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSFNIECEM-----MKSIRHRNLIKVISTCS----N 92
A+ L + VA+K +Q G + E+ +++ H N++++ C+ +
Sbjct: 30 ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89
Query: 93 EEFK-ALVLEYMPHGSLEKYL-------YSSNCILDIFQRLNIMIDVASALEYLHFGYSA 144
E K LV E++ L YL + I D+ M + L++LH S
Sbjct: 90 RETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDM------MFQLLRGLDFLH---SH 139
Query: 145 QVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRE 204
+V+H DLKP N+L+ + L+DF +A++ + + M T + T+ APE +
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSY 196
Query: 205 STNGDVYSFGIMLMETFTRK 224
+T D++S G + E F RK
Sbjct: 197 ATPVDLWSVGCIFAEMFRRK 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S + T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 169
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 99 YREL-QKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S + T+ + PE D++S G++ E K P
Sbjct: 155 FG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVIST----CSNEEFKALVLEYMPHGS 107
VAVK+F +Q +++++ E + ++H N+++ I S + L+ + GS
Sbjct: 50 VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS 108
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF-------GYSAQVIHCDLKPINVLLDD 160
L +L ++ ++ + +I +A L YLH G+ + H D+K NVLL +
Sbjct: 109 LSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166
Query: 161 NMVAHLSDFSIA-KLLTGEYQSMTQTQTLATIGCIAPEYRRKG----RES-TNGDVYSFG 214
N+ A ++DF +A K G+ T Q + T +APE R++ D+Y+ G
Sbjct: 167 NLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG 225
Query: 215 IMLMETFTR----KKPTDE 229
++L E +R P DE
Sbjct: 226 LVLWELASRCTAADGPVDE 244
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 47 SSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
++ +E A K+ N + R F+ E + + ++H N++++ + E F LV + +
Sbjct: 29 TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 88
Query: 105 HGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
G L + YS S+CI I LE + + +S ++H +LKP N
Sbjct: 89 GGELFEDIVAREFYSEADASHCIQQI-------------LESIAYCHSNGIVHRNLKPEN 135
Query: 156 VLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
+LL L+DF +A + S T G ++PE +K S D+++
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192
Query: 213 FGIML 217
G++L
Sbjct: 193 CGVIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 47 SSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
++ +E A K+ N + R F+ E + + ++H N++++ + E F LV + +
Sbjct: 28 TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 87
Query: 105 HGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
G L + YS S+CI I LE + + +S ++H +LKP N
Sbjct: 88 GGELFEDIVAREFYSEADASHCIQQI-------------LESIAYCHSNGIVHRNLKPEN 134
Query: 156 VLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
+LL L+DF +A + S T G ++PE +K S D+++
Sbjct: 135 LLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 191
Query: 213 FGIML 217
G++L
Sbjct: 192 CGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 47 SSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
++ +E A K+ N + R F+ E + + ++H N++++ + E F LV + +
Sbjct: 29 TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 88
Query: 105 HGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
G L + YS S+CI I LE + + +S ++H +LKP N
Sbjct: 89 GGELFEDIVAREFYSEADASHCIQQI-------------LESIAYCHSNGIVHRNLKPEN 135
Query: 156 VLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
+LL L+DF +A + S T G ++PE +K S D+++
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192
Query: 213 FGIML 217
G++L
Sbjct: 193 CGVIL 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 75 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 128
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
L++LH + ++H DLKP N+L+ L+DF +A++ + YQ M T +
Sbjct: 127 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQ-MALTPVV 180
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
T+ APE + +T D++S G + E F RK
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLY---------SSNCILDIFQRLNIMI 129
+H N++ ++ C++ ++ EY +G L +L L++ L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA 189
VA + +L S IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 168 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+S+GI+L E F+
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ AM VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 36 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 94
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 95 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 151
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 250
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 251 YDPSRRPRFTELKAQLSTI 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 122
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A AL Y H +VIH D+KP N+L+ ++DF + S+ + T
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 175
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTM 250
+ + PE D++ G++ E P D + E + I +
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--------IVNV 227
Query: 251 EVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFK 302
++ LS ++K L ++ +E P + N+R ++ +++
Sbjct: 228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 123
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A AL Y H +VIH D+KP N+L+ ++DF + S+ + T
Sbjct: 124 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 176
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTM 250
+ + PE D++ G++ E P D + E + I +
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--------IVNV 228
Query: 251 EVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFK 302
++ LS ++K L ++ +E P + N+R ++ +++
Sbjct: 229 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 280
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 32 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 88
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 89 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 147
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 148 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 254
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 255 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 304
Query: 306 S 306
Sbjct: 305 P 305
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 118
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL ++DF + S + T
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 171
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 122
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A AL Y H +VIH D+KP N+L+ ++DF + S+ + T
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 175
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTM 250
+ + PE D++ G++ E P D + E + I +
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR--------IVNV 227
Query: 251 EVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFK 302
++ LS ++K L ++ +E P + N+R ++ +++
Sbjct: 228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 279
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL +++F + S +T T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGT 172
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+ ++ +S + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDAS-ALTGIPLPL-IKSY 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 65
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF AKLL E +
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 231
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 232 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
Query: 306 S 306
Sbjct: 282 P 282
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ H L+ ++ +S + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDAS-ALTGIPLPL-IKSY 111
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 34/303 (11%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVKVFNLQ---CGRAF 65
A IL F++ + G+ IP + +++ V + L+ +A
Sbjct: 41 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIMELREATSPKAN 95
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
K E +M S+ + ++ +++ C + L+ + MP G L Y+ + L
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLL 154
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
N + +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 155 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNW 244
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-------- 263
Query: 245 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI- 303
S +E L Q I C V+ + ++C + + R RE++ + K+
Sbjct: 264 ---SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 311
Query: 304 RDS 306
RD
Sbjct: 312 RDP 314
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 51 EVAVKVFNLQCGRAFKSFNI---------ECEMMKSIR-HRNLIKVISTCSNEEFKALVL 100
E AVK+ ++ G +F + + E ++++ + H N+I++ T F LV
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 101 EYMPHGSLEKYLYSSNCILDIFQR--LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+ M G L YL + + R + +++V AL L+ ++H DLKP N+LL
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILL 157
Query: 159 DDNMVAHLSDFSIA-KLLTGE 178
DD+M L+DF + +L GE
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGE 178
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 118
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+A+AL Y H S +VIH D+KP N+LL +++F + S +T T
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGT 171
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ + PE D++S G++ E K P
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + VA+K + +A K
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKE 67
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF AKLL E +
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 233
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 234 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 283
Query: 306 S 306
Sbjct: 284 P 284
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 47 SSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 104
++ +E A K+ N + R F+ E + + ++H N++++ + E F LV + +
Sbjct: 52 TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 111
Query: 105 HGSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
G L + YS S+CI I LE + + +S ++H +LKP N
Sbjct: 112 GGELFEDIVAREFYSEADASHCIQQI-------------LESIAYCHSNGIVHRNLKPEN 158
Query: 156 VLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYS 212
+LL L+DF +A + S T G ++PE +K S D+++
Sbjct: 159 LLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 215
Query: 213 FGIML 217
G++L
Sbjct: 216 CGVIL 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 47 SSAMEVAVKVFNLQCGR-AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
SS +E +K N + + E E++KS+ H N+IK+ + +V+E
Sbjct: 45 SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG 104
Query: 106 GSLEKYLYSSNC---ILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD-- 160
G L + + S+ L +M + +AL Y H S V+H DLKP N+L D
Sbjct: 105 GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTS 161
Query: 161 -NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGREST-NGDVYSFGIML 217
+ + DF +A+L + S T T +APE + R+ T D++S G+++
Sbjct: 162 PHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVM 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 9/230 (3%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + VA+K + +A K
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKE 63
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 44/201 (21%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMPH 105
VAVK+F+ R KS+ E E+ ++ RH N++ I++ + L+ Y
Sbjct: 63 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 119
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGYSAQ--VIHCDLKPINVLLDD 160
GSL YL + LD L I++ +AS L +LH FG + + H DLK N+L+
Sbjct: 120 GSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 177
Query: 161 NMVAHLSDFSIAKLLTGEYQSMTQTQT-----LATIGCIAPE-------------YRRKG 202
N ++D +A + + QS Q + T +APE Y+R
Sbjct: 178 NGQCCIADLGLAVMHS---QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV- 233
Query: 203 RESTNGDVYSFGIMLMETFTR 223
D+++FG++L E R
Sbjct: 234 ------DIWAFGLVLWEVARR 248
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 26/175 (14%)
Query: 55 KVFNLQC---GRAFKSFNIECEM--MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS-- 107
K+F L+C AF+ ++E E+ +K I+H N++ + + LV++ + G
Sbjct: 35 KLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF 94
Query: 108 ---LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDN 161
LE+ +Y+ + Q+ V SA++YLH ++H DLKP N+L ++N
Sbjct: 95 DRILERGVYTEKDASLVIQQ------VLSAVKYLH---ENGIVHRDLKPENLLYLTPEEN 145
Query: 162 MVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
++DF ++K+ Q+ + T G +APE + S D +S G++
Sbjct: 146 SKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKV-FNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ AM VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 474
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 475 GELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 531
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 532 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 591 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 630
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 631 YDPSRRPRFTELKAQLSTI 649
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 44/201 (21%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMPH 105
VAVK+F+ R KS+ E E+ ++ RH N++ I++ + L+ Y
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGYSAQ--VIHCDLKPINVLLDD 160
GSL YL + LD L I++ +AS L +LH FG + + H DLK N+L+
Sbjct: 91 GSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 148
Query: 161 NMVAHLSDFSIAKLLTGEYQSMTQTQT-----LATIGCIAPE-------------YRRKG 202
N ++D +A + + QS Q + T +APE Y+R
Sbjct: 149 NGQCCIADLGLAVMHS---QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV- 204
Query: 203 RESTNGDVYSFGIMLMETFTR 223
D+++FG++L E R
Sbjct: 205 ------DIWAFGLVLWEVARR 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 38/174 (21%)
Query: 69 NIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN-- 126
+E +++ + H ++K+ E L+L+++ G D+F RL+
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKE 121
Query: 127 ----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
+ ++A AL++LH S +I+ DLKP N+LLD+ L+DF ++K
Sbjct: 122 VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--- 175
Query: 177 GEYQSMTQTQTL----ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+S+ + T+ +APE + + + D +SFG+++ E T P
Sbjct: 176 ---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 44/201 (21%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMPH 105
VAVK+F+ R KS+ E E+ ++ RH N++ I++ + L+ Y
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGYSAQ--VIHCDLKPINVLLDD 160
GSL YL + LD L I++ +AS L +LH FG + + H DLK N+L+
Sbjct: 91 GSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 148
Query: 161 NMVAHLSDFSIAKLLTGEYQSMTQTQT-----LATIGCIAPE-------------YRRKG 202
N ++D +A + + QS Q + T +APE Y+R
Sbjct: 149 NGQCCIADLGLAVMHS---QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV- 204
Query: 203 RESTNGDVYSFGIMLMETFTR 223
D+++FG++L E R
Sbjct: 205 ------DIWAFGLVLWEVARR 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 38/174 (21%)
Query: 69 NIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN-- 126
+E +++ + H ++K+ E L+L+++ G D+F RL+
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKE 120
Query: 127 ----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
+ ++A AL++LH S +I+ DLKP N+LLD+ L+DF ++K
Sbjct: 121 VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--- 174
Query: 177 GEYQSMTQTQTL----ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+S+ + T+ +APE + + + D +SFG+++ E T P
Sbjct: 175 ---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEF 95
G I+ + +FL S V K+ A + E M+K ++H NL+ ++ +
Sbjct: 28 GQIVAIKKFLESEDDPVIKKI-------ALR----EIRMLKQLKHPNLVNLLEVFRRKRR 76
Query: 96 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS----ALEYLHFGYSAQVIHCDL 151
LV EY H L + LD +QR V S L+ ++F + IH D+
Sbjct: 77 LHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDV 128
Query: 152 KPINVLLDDNMVAHLSDFSIAKLLTG 177
KP N+L+ + V L DF A+LLTG
Sbjct: 129 KPENILITKHSVIKLCDFGFARLLTG 154
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 9/230 (3%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 66
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
S +VAVK+ +L+ + + E +M+ +H N++++ + E +++E++ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
L + S L+ Q + V AL YLH + VIH D+K ++LL + LS
Sbjct: 129 LTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
DF ++ + + + T +APE + +T D++S GIM++E + P
Sbjct: 184 DFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 50 MEVAVKVFNLQCGRA-FKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
++VA+KV +A + E ++M + + ++++I C E LV+E G L
Sbjct: 364 IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPL 422
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
K+L + + ++ V+ ++YL +H +L NVLL + A +SD
Sbjct: 423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 169 FSIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKP 226
F ++K L + T ++ + APE + S+ DV+S+G+ + E + +KP
Sbjct: 480 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
Query: 227 TDEIFNREM 235
++ E+
Sbjct: 540 YKKMKGPEV 548
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 119
Q ++ E ++ +RH N I+ E LV+EY L S++ +L
Sbjct: 54 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--------LGSASDLL 105
Query: 120 DIFQRLNIMIDVAS----ALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLL 175
++ ++ +++A+ AL+ L + +S +IH D+K N+LL + + L DF A ++
Sbjct: 106 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
Query: 176 TGEYQSMTQTQTLATIGCIAPEY---RRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFN 232
+ T +APE +G+ DV+S GI +E RK P +FN
Sbjct: 166 A------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 52 VAVKV-FNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
+A+KV F Q +A + E E+ +RH N++++ + L+LEY P G++
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ L + D + + ++A+AL Y H S +VIH D+KP N+LL ++D
Sbjct: 122 YRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 177
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
F + S + T+ + PE D++S G++ E K P
Sbjct: 178 FG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 69 NIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 128
+E +++ + H ++K+ E L+L+++ G L L S + +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYL 132
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
++A AL++LH S +I+ DLKP N+LLD+ L+DF ++K +S+ +
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKA 183
Query: 189 ----ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T+ +APE + + + D +SFG+++ E T P
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 119
Q ++ E ++ +RH N I+ E LV+EY L S++ +L
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--------LGSASDLL 144
Query: 120 DIFQRLNIMIDVAS----ALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLL 175
++ ++ +++A+ AL+ L + +S +IH D+K N+LL + + L DF A ++
Sbjct: 145 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
Query: 176 TGEYQSMTQTQTLATIGCIAPEY---RRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFN 232
+ T +APE +G+ DV+S GI +E RK P +FN
Sbjct: 205 A------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 255
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 9/230 (3%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 17 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 73
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 132
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF +AKLL E +
Sbjct: 133 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ A+ VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 36 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 94
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 95 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 151
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 250
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 251 YDPSRRPRFTELKAQLSTI 269
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 22 SQTSDFQILNFFICGVIIPVAQFL-ISSAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSI 78
S T ++Q+ G V + + + + E A K+ N + R + E + + +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLNIMI 129
+H N++++ + S E F LV + + G L + YS S+CI I
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI-------- 112
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQ 186
LE + + V+H DLKP N+LL L+DF +A + G+ Q+
Sbjct: 113 -----LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 187 TLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T G ++PE RK D+++ G++L
Sbjct: 168 --GTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ A+ VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 33 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 91
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 92 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 148
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 149 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 208 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 247
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 248 YDPSRRPRFTELKAQLSTI 266
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ A+ VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 64 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 122
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 123 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 179
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 180 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 238
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 239 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 278
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 279 YDPSRRPRFTELKAQLSTI 297
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
S ++VAVK + + F +E ++ H+N+++ I + ++LE M
Sbjct: 73 PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 106 GSLEKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGYSAQVIHCDLKPINV 156
G L+ +L S L + L++ D+A +YL HF IH D+ N
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNC 186
Query: 157 LL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL VA + DF +A+ + + + + PE +G ++ D +SF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 214 GIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFV------- 266
G++L E F+ ++P + +QE + FV
Sbjct: 247 GVLLWEIFSL-------------------GYMPYPSKS-------NQEVLEFVTSGGRMD 280
Query: 267 AKEQCVSFVFNLAIECTVESPEQRIN 292
+ C V+ + +C PE R N
Sbjct: 281 PPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ A+ VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 41 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 99
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 100 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 156
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 157 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 215
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 216 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 255
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 256 YDPSRRPRFTELKAQLSTI 274
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 78 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 137
+ RN +K ++ + + +EY +G+L ++S N + + + AL Y
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 138 LHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-------LLTGEYQSMTQ-----T 185
+H S +IH DLKP+N+ +D++ + DF +AK +L + Q++ T
Sbjct: 132 IH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 186 QTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLME 219
+ T +A E G + D+YS GI+ E
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 9/230 (3%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 65
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+++ MP G L Y+ + LN
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF AKLL E +
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVIS---TCSNEEFK-ALVLEYMPH 105
VAVK+F+ R +S+ E E+ ++ RH N++ I+ T N + L+ Y H
Sbjct: 34 VAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEH 90
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGYSAQ--VIHCDLKPINVLLDD 160
GSL +L L+ L + + A L +LH FG + + H D K NVL+
Sbjct: 91 GSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKS 148
Query: 161 NMVAHLSDFSIAKLLT--GEYQSMTQTQTLATIGCIAPEY-----RRKGRESTNG-DVYS 212
N+ ++D +A + + +Y + + T +APE R ES D+++
Sbjct: 149 NLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWA 208
Query: 213 FGIMLMETFTR----------KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQED 262
FG++L E R + P ++ + + + +VV + +
Sbjct: 209 FGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFE---------DMKKVVCVDQQTPTI 259
Query: 263 IHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDS 306
+ +A + +S + + EC +P R+ A I L KI +S
Sbjct: 260 PNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 70
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF AKLL E +
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 236
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 237 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
Query: 306 S 306
Sbjct: 287 P 287
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 30/301 (9%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 63
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF AKLL E +
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMTLKHWGNNWLP 246
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------- 229
Query: 247 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKI-RD 305
S +E L Q I C V+ + ++C + + R RE++ + K+ RD
Sbjct: 230 -SILE--KGERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
Query: 306 S 306
Sbjct: 280 P 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
SS VAVK +L+ + + E +M+ +H N++++ ++ + +V+E++ G
Sbjct: 43 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+L + ++ ++ Q + + V AL LH + VIH D+K ++LL + L
Sbjct: 103 ALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 157
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
SDF ++ E + + T +APE + D++S GIM++E + P
Sbjct: 158 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
Query: 227 TDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVE 285
FN P+ M+++ NL + +++H V+ F+ L V
Sbjct: 216 ---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVR 256
Query: 286 SPEQRINAREIVAKLF 301
P QR A E++ F
Sbjct: 257 DPAQRATAAELLKHPF 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ A+ VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 38 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 96
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 97 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 153
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 154 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 212
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 213 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 252
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 253 YDPSRRPRFTELKAQLSTI 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ A+ VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 39 NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 97
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+ N
Sbjct: 98 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVK 154
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 155 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 213
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 214 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 253
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 254 YDPSRRPRFTELKAQLSTI 272
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYL---------YSSNCILDIFQRLNIMI 129
H N++ ++ C+ +V+ E+ G+L YL Y + F L +I
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 130 ----DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
SS VAVK +L+ + + E +M+ +H N++++ ++ + +V+E++ G
Sbjct: 47 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 106
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+L + ++ ++ Q + + V AL LH + VIH D+K ++LL + L
Sbjct: 107 ALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 161
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
SDF ++ E + + T +APE + D++S GIM++E + P
Sbjct: 162 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
Query: 227 TDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVE 285
FN P+ M+++ NL + +++H V+ F+ L V
Sbjct: 220 ---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVR 260
Query: 286 SPEQRINAREIVAKLF 301
P QR A E++ F
Sbjct: 261 DPAQRATAAELLKHPF 276
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 26/230 (11%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEM--MKSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLS 259
V+S GI+L + P D+ + W ++ + +D+ L+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILDIFQRL---- 125
+H N++ ++ C++ ++ EY +G L +L YS N + ++L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 126 --NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
+ VA + +L S IH D+ NVLL + VA + DF +A+ + + +
Sbjct: 168 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+S+GI+L E F+
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
SS VAVK +L+ + + E +M+ +H N++++ ++ + +V+E++ G
Sbjct: 54 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 113
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+L + ++ ++ Q + + V AL LH + VIH D+K ++LL + L
Sbjct: 114 ALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 168
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
SDF ++ E + + T +APE + D++S GIM++E + P
Sbjct: 169 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
Query: 227 TDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVE 285
FN P+ M+++ NL + +++H V+ F+ L V
Sbjct: 227 ---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVR 267
Query: 286 SPEQRINAREIVAKLF 301
P QR A E++ F
Sbjct: 268 DPAQRATAAELLKHPF 283
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 75 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 128
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
L++LH + ++H DLKP N+L+ L+DF +A++ + YQ M +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQ-MALAPVV 172
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
T+ APE + +T D++S G + E F RK
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ L+K++ +S + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDAS-ALTGIPLPL-IKSY 109
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 20/191 (10%)
Query: 51 EVAVKVFNLQCGR--AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
EVA+++ +++ K+F E + RH N++ + C + A++ +L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+ + +LD+ + I ++ + YLH + ++H DLK NV D+ V ++D
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITD 172
Query: 169 FSI----AKLLTGEYQSMTQTQTLATIGCIAPEYRRKGREST---------NGDVYSFGI 215
F + L G + + Q + +APE R+ T + DV++ G
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQN-GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 216 MLMETFTRKKP 226
+ E R+ P
Sbjct: 232 IWYELHAREWP 242
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
SS VAVK +L+ + + E +M+ +H N++++ ++ + +V+E++ G
Sbjct: 52 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 111
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+L + ++ ++ Q + + V AL LH + VIH D+K ++LL + L
Sbjct: 112 ALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 166
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
SDF ++ E + + T +APE + D++S GIM++E + P
Sbjct: 167 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
Query: 227 TDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVE 285
FN P+ M+++ NL + +++H V+ F+ L V
Sbjct: 225 ---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVR 265
Query: 286 SPEQRINAREIVAKLF 301
P QR A E++ F
Sbjct: 266 DPAQRATAAELLKHPF 281
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ L+K++ +S + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDAS-ALTGIPLPL-IKSY 111
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAF---KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA ++ E + K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMI 129
E ++++ + R ++ + ++ LVL M G L+ ++Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA 189
++ LE LH ++++ DLKP N+LLDD+ +SD +A + + T +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVG 347
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T+G +APE + R + + D ++ G +L E + P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAF---KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA ++ E + K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMI 129
E ++++ + R ++ + ++ LVL M G L+ ++Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA 189
++ LE LH ++++ DLKP N+LLDD+ +SD +A + + T +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVG 347
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T+G +APE + R + + D ++ G +L E + P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 84/200 (42%), Gaps = 35/200 (17%)
Query: 52 VAVKVFNLQCGRAF-KSFNI-ECEMMKSIRHRNLIKVISTCSNEEFKA-------LVLEY 102
VAVKVF+ + F NI +M+ H N+ + I +E A LV+EY
Sbjct: 39 VAVKVFSFANRQNFINEKNIYRVPLME---HDNIARFI--VGDERVTADGRMEYLLVMEY 93
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG------YSAQVIHCDLKPINV 156
P+GSL KYL S D + V L YLH Y + H DL NV
Sbjct: 94 YPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 157 LLDDNMVAHLSDFSIAKLLTGEY------QSMTQTQTLATIGCIAPEYRRKG---RESTN 207
L+ ++ +SDF ++ LTG + + TI +APE R+ +
Sbjct: 152 LVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXES 211
Query: 208 G----DVYSFGIMLMETFTR 223
D+Y+ G++ E F R
Sbjct: 212 ALKQVDMYALGLIYWEIFMR 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ L+K++ +S + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDAS-ALTGIPLPL-IKSY 111
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
SS VAVK +L+ + + E +M+ +H N++++ ++ + +V+E++ G
Sbjct: 97 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+L + ++ ++ Q + + V AL LH + VIH D+K ++LL + L
Sbjct: 157 ALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 211
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
SDF ++ E + + T +APE + D++S GIM++E + P
Sbjct: 212 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
Query: 227 TDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVE 285
FN P+ M+++ NL + +++H V+ F+ L V
Sbjct: 270 ---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVR 310
Query: 286 SPEQRINAREIVAKLF 301
P QR A E++ F
Sbjct: 311 DPAQRATAAELLKHPF 326
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 75 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 128
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
L++LH + ++H DLKP N+L+ L+DF +A++ + YQ M +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQ-MALDPVV 172
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
T+ APE + +T D++S G + E F RK
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 9/230 (3%)
Query: 9 AFKTILSRDVFRRSQTSDFQILNFFICGVIIPVAQFLISSAMEVAVK-VFNLQCGRAFKS 67
A IL F++ + G+ IP + + + VA+K + +A K
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKE 65
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 127
E +M S+ + ++ +++ C + L+ + MP G L Y+ + LN
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ +A + YL +++H DL NVL+ ++DF AKLL E +
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT-RKKPTDEIFNREMT 236
I +A E + DV+S+G+ + E T KP D I E++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 22/192 (11%)
Query: 46 ISSAMEVAVKVFN---LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 102
I + EVAVK+ + L K F E + K + H N++K+ E+ LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEY 94
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM 162
G + YL + + R + SA++Y H + ++H DLK N+LLD +
Sbjct: 95 ASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLLDADX 150
Query: 163 VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEY------RRKGRESTNGDVYSFGIM 216
++DF + T L C AP Y + K + DV+S G++
Sbjct: 151 NIKIADFGFS-------NEFTFGNKLDAF-CGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 217 LMETFTRKKPTD 228
L + P D
Sbjct: 203 LYTLVSGSLPFD 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTC--SNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 128
E ++K + H N++K++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
D+ +EYLH+ ++IH D+KP N+L+ ++ ++DF ++ G + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG--SDALLSNTV 198
Query: 189 ATIGCIAPEYRRKGRESTNG---DVYSFGIML 217
T +APE + R+ +G DV++ G+ L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAF---KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA ++ E + K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 32/171 (18%)
Query: 69 NIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN-- 126
+E +++ + H ++K+ E L+L+++ G D+F RL+
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKE 124
Query: 127 ----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-LL 175
+ ++A L++LH S +I+ DLKP N+LLD+ L+DF ++K +
Sbjct: 125 VMFTEEDVKFYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI 181
Query: 176 TGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
E ++ + T+ +APE + S + D +S+G+++ E T P
Sbjct: 182 DHEKKAYS---FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 48 SAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ E A K+ N + R + E + + ++H N++++ + S E L+ + +
Sbjct: 46 AGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 105
Query: 106 GSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
G L + YS S+CI I LE + + V+H DLKP N+
Sbjct: 106 GELFEDIVAREYYSEADASHCIQQI-------------LEAVLHCHQMGVVHRDLKPENL 152
Query: 157 LLDDNM---VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL + L+DF +A + GE Q+ T G ++PE RK D+++
Sbjct: 153 LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWAC 210
Query: 214 GIML 217
G++L
Sbjct: 211 GVIL 214
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 75 MKSIRHRNLIKVISTC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 128
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
L++LH + ++H DLKP N+L+ L+DF +A++ + YQ M +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQ-MALFPVV 172
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKK 225
T+ APE + +T D++S G + E F RK
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKVF-NLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ AM VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 36 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 94
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+
Sbjct: 95 GELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVK 151
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 211 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 250
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 251 YDPSRRPRFTELKAQLSTI 269
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSNC-----------ILDIFQRLNI 127
H N++ ++ C+ +V+ E+ G+L YL S L + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMK-SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLE 109
+VAVK +C F + E ++++ S H N+I+ T + +F+ + +E + +L+
Sbjct: 50 DVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE-LCAATLQ 105
Query: 110 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD-----DNMVA 164
+Y+ + + + ++ S L +LH S ++H DLKP N+L+ + A
Sbjct: 106 EYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKA 162
Query: 165 HLSDFSI-AKLLTGEYQSMTQTQTLATIGCIAPE 197
+SDF + KL G + ++ T G IAPE
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
A KV + + + + +E +++ S H N++K++ E +++E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 112 LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ L Q + AL YLH ++IH DLK N+L + L+DF +
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 172 AKLLTGEYQSMTQTQTLATIGCIAPEY----RRKGRE-STNGDVYSFGIMLMETFTRKKP 226
+ T Q + + T +APE K R DV+S GI L+E + P
Sbjct: 182 SAKNTRXIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
Query: 227 TDEIFNREMTLK 238
E+ + LK
Sbjct: 240 HHELNPMRVLLK 251
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
A KV + + + + +E +++ S H N++K++ E +++E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 112 LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ L Q + AL YLH ++IH DLK N+L + L+DF +
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 172 AKLLTGEYQSMTQTQTLATIGCIAPEY----RRKGRE-STNGDVYSFGIMLMETFTRKKP 226
+ T Q + + T +APE K R DV+S GI L+E + P
Sbjct: 182 SAKNTRXIQR--RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
Query: 227 TDEIFNREMTLK 238
E+ + LK
Sbjct: 240 HHELNPMRVLLK 251
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ S++ + L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K + H N++K++ E LV E++ S++ + L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ L+ L F +S +V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 191 IGCIAPEYRRKGR-ESTNGDVYSFGIMLMETFTRK 224
+ APE + ST D++S G + E TR+
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN----CILDIFQRLNIM------ 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 129 -IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 22 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 81
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 82 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 128
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 129 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 189 VWSCGIVLTAMLAGELPWDQ 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
A KV + + + + +E +++ S H N++K++ E +++E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 112 LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ L Q + AL YLH ++IH DLK N+L + L+DF +
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 172 AKLLTGEYQSMTQTQTLATIGCIAPEY----RRKGRE-STNGDVYSFGIMLMETFTRKKP 226
+ T Q + + T +APE K R DV+S GI L+E + P
Sbjct: 182 SAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
Query: 227 TDEIFNREMTLK 238
E+ + LK
Sbjct: 240 HHELNPMRVLLK 251
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
SS VAVK +L+ + + E +M+ +H N++++ ++ + +V+E++ G
Sbjct: 174 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 233
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
+L + ++ ++ Q + + V AL LH + VIH D+K ++LL + L
Sbjct: 234 ALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKL 288
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
SDF ++ E + + T +APE + D++S GIM++E + P
Sbjct: 289 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
Query: 227 TDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAIECTVE 285
FN P+ M+++ NL + +++H V+ F+ L V
Sbjct: 347 ---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVR 387
Query: 286 SPEQRINAREIVAKLF 301
P QR A E++ F
Sbjct: 388 DPAQRATAAELLKHPF 403
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 27/259 (10%)
Query: 47 SSAMEVAVKV-FNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ AM VA+K N + F E M+ H +++K+I + E +++E
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTL 474
Query: 106 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH 165
G L +L LD+ + +++AL YL S + +H D+ NVL+
Sbjct: 475 GELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVK 531
Query: 166 LSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK- 224
L DF +++ + L I +APE R ++ DV+ FG+ + E
Sbjct: 532 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
Query: 225 KPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTV 284
KP + N ++ + LP+ C +++L +C
Sbjct: 591 KPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWA 630
Query: 285 ESPEQRINAREIVAKLFKI 303
P +R E+ A+L I
Sbjct: 631 YDPSRRPRFTELKAQLSTI 649
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++ IRH N+I + N+ L+LE + G L +L + + + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQ 123
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH----LSDFSIA-KLLTG-EYQSMTQ 184
+ + YLH S ++ H DLKP N++L D V + L DF IA K+ G E++++
Sbjct: 124 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-- 178
Query: 185 TQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 179 ---FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSS-------NCILDIFQRLNIM--- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 129 ----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ 184
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 185 TQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 100 LEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+E+ G+LE+++ LD L + + ++Y+H S ++IH DLKP N+ L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFL 169
Query: 159 DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLM 218
D + DF L+T +T++ T+ ++PE D+Y+ G++L
Sbjct: 170 VDTKQVKIGDFG---LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 226
Query: 219 E 219
E
Sbjct: 227 E 227
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++ IRH N+I + N+ L+LE + G L +L + + + +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQ 137
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH----LSDFSIA-KLLTG-EYQSMTQ 184
+ + YLH S ++ H DLKP N++L D V + L DF IA K+ G E++++
Sbjct: 138 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-- 192
Query: 185 TQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 193 ---FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 167 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 215
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 265
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 266 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 321
Query: 207 NG--DVYSFGIMLMETFTRKKPTDE 229
N D +S G++L + P E
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 83 LIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 142
++++ ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 185
Query: 143 SAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPE-YRR 200
S IH D+KP N+LLD + L+DF + E M + T + T I+PE +
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDTAVGTPDYISPEVLKS 243
Query: 201 KGRESTNG---DVYSFGIMLMETFTRKKP 226
+G + G D +S G+ L E P
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
A KV + + + +E E++ + H ++K++ ++ +++E+ P G+++
Sbjct: 39 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 98
Query: 112 LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ + L Q I + LE L+F +S ++IH DLK NVL+ L+DF +
Sbjct: 99 MLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 155
Query: 172 AKLLTGEYQSMTQTQTLATIGCIAPEY-----RRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ Q + + T +APE + D++S GI L+E + P
Sbjct: 156 SAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
Query: 227 TDEIFNREMTLK 238
E+ + LK
Sbjct: 214 HHELNPMRVLLK 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 83 LIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 142
++++ ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 190
Query: 143 SAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPE-YRR 200
S IH D+KP N+LLD + L+DF + E M + T + T I+PE +
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDTAVGTPDYISPEVLKS 248
Query: 201 KGRESTNG---DVYSFGIMLMETFTRKKP 226
+G + G D +S G+ L E P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++ IRH N+I + N+ L+LE + G L +L + + + +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQ 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAH----LSDFSIA-KLLTG-EYQSMTQ 184
+ + YLH S ++ H DLKP N++L D V + L DF IA K+ G E++++
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-- 171
Query: 185 TQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 172 ---FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 200
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 83 LIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 142
++++ ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 190
Query: 143 SAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPE-YRR 200
S IH D+KP N+LLD + L+DF + E M + T + T I+PE +
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE--GMVRCDTAVGTPDYISPEVLKS 248
Query: 201 KGRESTNG---DVYSFGIMLMETFTRKKP 226
+G + G D +S G+ L E P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFK-ALVLEYMPHGS 107
AM+V K +Q + + E ++++ IR + + E K L+L+Y+ G
Sbjct: 86 AMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGE 145
Query: 108 LEKYLYSSNCILDIFQRLNIMI-DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
L +L + + I + ++ ALE+LH +I+ D+K N+LLD N L
Sbjct: 146 LFTHLSQRERFTE--HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVL 200
Query: 167 SDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG--DVYSFGIMLMETFTRK 224
+DF ++K + ++ TI +AP+ R G + D +S G+++ E T
Sbjct: 201 TDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259
Query: 225 KP 226
P
Sbjct: 260 SP 261
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ K + H N++K + L
Sbjct: 23 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 82
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 83 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 129
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 190 VWSCGIVLTAMLAGELPWDQ 209
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 181 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 229
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 279
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 280 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 335
Query: 207 NG--DVYSFGIMLMETFTRKKPTDE 229
N D +S G++L + P E
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + T+ +
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 238
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 239 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 279
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 44/185 (23%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
E + +FN+Q +F++FN E +++ + +L +VIST +
Sbjct: 69 ENIITIFNIQRPDSFENFN-EVYIIQELMQTDLHRVIST--------------------Q 107
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
L + I+Q L A++ LH + VIH DLKP N+L++ N + DF
Sbjct: 108 MLSDDHIQYFIYQTLR-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFG 157
Query: 171 IAKLL----------TGEYQSMTQTQTLATIGCIAPEYR-RKGRESTNGDVYSFGIMLME 219
+A+++ TG+ M T+ +AT APE + S DV+S G +L E
Sbjct: 158 LARIIDESAADNSEPTGQQSGM--TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
Query: 220 TFTRK 224
F R+
Sbjct: 216 LFLRR 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 135
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 216 MLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE---QCV 272
L+E + P +E ++ P++ E++D ++ E +
Sbjct: 192 SLVEMAVGRYPIPPPDAKE-------DSRPPMAIFELLD----------YIVNEPPPKLP 234
Query: 273 SFVFNLAIE-----CTVESPEQRINAREIVAKLF 301
S VF+L + C +++P +R + ++++ F
Sbjct: 235 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 268
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + T+ +
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 234
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 235 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR---LNI 127
E ++ +++H N+++ + +V++Y G L K + + +L FQ L+
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDW 130
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
+ + AL+++H +++H D+K N+ L + L DF IA++L T
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-----TVELA 182
Query: 188 LATIGC---IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNW 244
A IG ++PE + D+++ G +L E T K + + + LK ++
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF 242
Query: 245 LPISTMEVVD-ANLLSQ 260
P+S D +L+SQ
Sbjct: 243 PPVSLHYSYDLRSLVSQ 259
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+++EY+ GS L L+ I+ ++ L+YLH S + IH D+K NVL
Sbjct: 94 IIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLH---SERKIHRDIKAANVL 148
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L + L+DF +A LT + + + T +APE ++ D++S GI
Sbjct: 149 LSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 206
Query: 218 METFTRKKPTDEI 230
+E + P ++
Sbjct: 207 IELAKGEPPNSDL 219
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
A KV + + + +E E++ + H ++K++ ++ +++E+ P G+++
Sbjct: 47 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 106
Query: 112 LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ + L Q I + LE L+F +S ++IH DLK NVL+ L+DF +
Sbjct: 107 MLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 163
Query: 172 AKLLTGEYQSMTQTQTLATIGCIAPEY-----RRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ Q + + T +APE + D++S GI L+E + P
Sbjct: 164 SAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
Query: 227 TDEIFNREMTLK 238
E+ + LK
Sbjct: 222 HHELNPMRVLLK 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 128
E ++++ +RH+N+I+++ NEE + +V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL 188
+ LEYLH S ++H D+KP N+LL +S +A+ L + + +T
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH-PFAADDTCRTS 171
Query: 189 ATIGCIAPEYRRKGRESTNG---DVYSFGIMLMETFTRKKP--TDEIFN 232
P G ++ +G D++S G+ L T P D I+
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + T+ +
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 254
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 255 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 295
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 44/185 (23%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
E + +FN+Q +F++FN E +++ + +L +VIST +
Sbjct: 69 ENIITIFNIQRPDSFENFN-EVYIIQELMQTDLHRVIST--------------------Q 107
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
L + I+Q L A++ LH + VIH DLKP N+L++ N + DF
Sbjct: 108 MLSDDHIQYFIYQTLR-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFG 157
Query: 171 IAKLL----------TGEYQSMTQTQTLATIGCIAPEYR-RKGRESTNGDVYSFGIMLME 219
+A+++ TG+ M T+ +AT APE + S DV+S G +L E
Sbjct: 158 LARIIDESAADNSEPTGQQSGM--TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
Query: 220 TFTRK 224
F R+
Sbjct: 216 LFLRR 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 62 GRAFKSFNIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYL 112
G+AFK N E ++M+ + H N++++ +E + LVL+Y+P + Y
Sbjct: 56 GKAFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS 113
Query: 113 YSSNCILDIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFS 170
+ + I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF
Sbjct: 114 RAKQTLPVIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
AK L+ GE + + APE + T+ DV+S G +L E
Sbjct: 169 SAKQLVRGE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 38/193 (19%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 42 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 90
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 140
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 196
Query: 207 NG--DVYSFGIML 217
N D +S G++L
Sbjct: 197 NRAVDCWSLGVIL 209
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMP 104
EVAVK+F+ R +S+ E E+ +++ RH N++ I+ + + LV +Y
Sbjct: 28 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF---GYSAQ--VIHCDLKPINVLLD 159
HGSL YL ++ + + + AS L +LH G + + H DLK N+L+
Sbjct: 85 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 142
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLA------TIGCIAPEY-----RRKGRES-TN 207
N ++D +A + S T T +A T +APE K ES
Sbjct: 143 KNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198
Query: 208 GDVYSFGIMLMETFTR 223
D+Y+ G++ E R
Sbjct: 199 ADIYAMGLVFWEIARR 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 74 MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 133
++K ++H+N++++ +++ LV E+ L+KY S N LD + + +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 134 ALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
L + H S V+H DLKP N+L++ N L+DF +A+
Sbjct: 113 GLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 41 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 89
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 139
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 140 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 195
Query: 207 NG--DVYSFGIMLMETFTRKKPTDE 229
N D +S G++L + P E
Sbjct: 196 NRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + T+ +
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 235
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 236 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 276
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 187 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 42 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 90
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 140
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 196
Query: 207 NG--DVYSFGIMLMETFTRKKPTDE 229
N D +S G++L + P E
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 78 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 137
+ RN +K ++ + + +EY + +L ++S N + + + AL Y
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 138 LHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-------LLTGEYQSMTQ-----T 185
+H S +IH DLKP+N+ +D++ + DF +AK +L + Q++ T
Sbjct: 132 IH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 186 QTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLME 219
+ T +A E G + D+YS GI+ E
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMP 104
EVAVK+F+ R +S+ E E+ +++ RH N++ I+ + + LV +Y
Sbjct: 29 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 85
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF---GYSAQ--VIHCDLKPINVLLD 159
HGSL YL ++ + + + AS L +LH G + + H DLK N+L+
Sbjct: 86 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 143
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLA------TIGCIAPEY-----RRKGRES-TN 207
N ++D +A + S T T +A T +APE K ES
Sbjct: 144 KNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 199
Query: 208 GDVYSFGIMLMETFTR 223
D+Y+ G++ E R
Sbjct: 200 ADIYAMGLVFWEIARR 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 48 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 96
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 146
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 147 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 202
Query: 207 NG--DVYSFGIMLMETFTRKKPTDE 229
N D +S G++L + P E
Sbjct: 203 NRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 38/205 (18%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA 97
II +F I SA E A N++ E E++K + H +IK+ + E++
Sbjct: 42 IISKRKFAIGSARE-ADPALNVE---------TEIEILKKLNHPCIIKIKNFFDAEDY-Y 90
Query: 98 LVLEYMPHGSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDL 151
+VLE M G L K L + C L +Q L A++YLH +IH DL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 140
Query: 152 KPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRK-GREST 206
KP NVLL +++ + ++DF +K+L GE M +TL T +APE G
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCGTPTYLAPEVLVSVGTAGY 196
Query: 207 NG--DVYSFGIMLMETFTRKKPTDE 229
N D +S G++L + P E
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMP 104
EVAVK+F+ R +S+ E E+ +++ RH N++ I+ + + LV +Y
Sbjct: 31 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 87
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF---GYSAQ--VIHCDLKPINVLLD 159
HGSL YL ++ + + + AS L +LH G + + H DLK N+L+
Sbjct: 88 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 145
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLA------TIGCIAPEY-----RRKGRES-TN 207
N ++D +A + S T T +A T +APE K ES
Sbjct: 146 KNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 201
Query: 208 GDVYSFGIMLMETFTR 223
D+Y+ G++ E R
Sbjct: 202 ADIYAMGLVFWEIARR 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
A KV + + + + +E +++ S H N++K++ E +++E+ G+++
Sbjct: 38 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 97
Query: 112 LYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSI 171
+ L Q + AL YLH ++IH DLK N+L + L+DF +
Sbjct: 98 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 154
Query: 172 AKLLTGEYQSMTQTQT--LATIGCIAPEY----RRKGRE-STNGDVYSFGIMLMETFTRK 224
+ T ++ Q + + T +APE K R DV+S GI L+E +
Sbjct: 155 SAKNT---RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
Query: 225 KPTDEIFNREMTLK 238
P E+ + LK
Sbjct: 212 PPHHELNPMRVLLK 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMP 104
EVAVK+F+ R +S+ E E+ +++ RH N++ I+ + + LV +Y
Sbjct: 54 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 110
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF---GYSAQ--VIHCDLKPINVLLD 159
HGSL YL + + + + + + AS L +LH G + + H DLK N+L+
Sbjct: 111 HGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 168
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLA------TIGCIAPEY-----RRKGRES-TN 207
N ++D +A + S T T +A T +APE K ES
Sbjct: 169 KNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 224
Query: 208 GDVYSFGIMLMETFTR 223
D+Y+ G++ E R
Sbjct: 225 ADIYAMGLVFWEIARR 240
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLY----------------------SSN 116
+H N++ ++ C++ ++ EY +G L +L
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
L++ L+ VA + +L S IH D+ NVLL + VA + DF +A+ +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + + + +APE + DV+S+GI+L E F+
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMP 104
EVAVK+F+ R +S+ E E+ +++ RH N++ I+ + + LV +Y
Sbjct: 34 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 90
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF---GYSAQ--VIHCDLKPINVLLD 159
HGSL YL ++ + + + AS L +LH G + + H DLK N+L+
Sbjct: 91 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 148
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLA------TIGCIAPEY-----RRKGRES-TN 207
N ++D +A + S T T +A T +APE K ES
Sbjct: 149 KNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 204
Query: 208 GDVYSFGIMLMETFTR 223
D+Y+ G++ E R
Sbjct: 205 ADIYAMGLVFWEIARR 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 80 HRNLIKVISTCSNEEFKALVL-EYMPHGSLEKYLYSS--------NCILDIFQRLNIM-- 128
H N++ ++ C+ +V+ E+ G+L YL S D+++ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 129 -----IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
VA +E+L S + IH DL N+LL + V + DF +A+ + + +
Sbjct: 152 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+SFG++L E F+
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + T+ +
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 282
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 283 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 323
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSI--RHRNLIKVISTCSNEEFKA----LVLEYMP 104
EVAVK+F+ R +S+ E E+ +++ RH N++ I+ + + LV +Y
Sbjct: 67 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF---GYSAQ--VIHCDLKPINVLLD 159
HGSL YL ++ + + + AS L +LH G + + H DLK N+L+
Sbjct: 124 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLA------TIGCIAPEY-----RRKGRES-TN 207
N ++D +A + S T T +A T +APE K ES
Sbjct: 182 KNGTCCIADLGLAV----RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 237
Query: 208 GDVYSFGIMLMETFTR 223
D+Y+ G++ E R
Sbjct: 238 ADIYAMGLVFWEIARR 253
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 26/188 (13%)
Query: 45 LISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKV------ISTCSNEEFKAL 98
L S VA+K LQ G+AFK N E ++M+ + H N++++ +E + L
Sbjct: 41 LCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 99 VLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPI 154
VL+Y+P + Y + + I+ +L M + +L Y+H FG + H D+KP
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQ 151
Query: 155 NVLLD-DNMVAHLSDFSIAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVY 211
N+LLD D V L DF AK L+ GE + + APE + T+ DV+
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSYICSRYYRAPELIFGATDYTSSIDVW 207
Query: 212 SFGIMLME 219
S G +L E
Sbjct: 208 SAGCVLAE 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 62 GRAFKSFNIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYL 112
G+AFK N E ++M+ + H N++++ +E + LVL+Y+P + Y
Sbjct: 56 GKAFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 113 YSSNCILDIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFS 170
+ + I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF
Sbjct: 114 RAKQTLPVIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 171 IAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
AK L+ GE + + APE + T+ DV+S G +L E
Sbjct: 169 SAKQLVRGE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 26/200 (13%)
Query: 43 QFLISSAMEVAVKVFNLQCGRAFK-SFNIECEMM--KSIRHRNLIKVISTCSNEEFKALV 99
Q ++ E AV V + RA NI+ E+ + H N++K + L
Sbjct: 24 QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLF 83
Query: 100 LEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEYLH-------FGYSAQVIHCD 150
LEY G L F R+ +I + A + H + + + H D
Sbjct: 84 LEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGD 209
+KP N+LLD+ +SDF +A + + + T+ +APE +R+ + D
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 210 VYSFGIMLMETFTRKKPTDE 229
V+S GI+L + P D+
Sbjct: 191 VWSCGIVLTAMLAGELPWDQ 210
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + T+ +
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 282
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 283 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 323
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K ++H N++ + E+ LV EY+ L++YL I+++ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
+ L Y H +V+H DLKP N+L+++ L+DF +A+
Sbjct: 109 LLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 135
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T TL
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCG 186
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 110 KYLYSSNCILD--IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS 167
KY+YS +LD I + + I +A+ H + ++IH D+KP N+LLD + L
Sbjct: 112 KYVYS---VLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLC 168
Query: 168 DFSIAKLLTGEYQSMTQTQTLATIGCIAPEY-----RRKGRESTNGDVYSFGIMLMETFT 222
DF I+ L S+ +T+ +APE R+G + DV+S GI L E T
Sbjct: 169 DFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQGYD-VRSDVWSLGITLYELAT 224
Query: 223 RKKP 226
+ P
Sbjct: 225 GRFP 228
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 69 NIECEMMK------SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 122
++EC M++ + H L + T +E V+EY+ G L ++ S + D+
Sbjct: 61 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLS 119
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL-LTGEYQS 181
+ ++ L++LH S +++ DLK N+LLD + ++DF + K + G+ ++
Sbjct: 120 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 176
Query: 182 MTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+ T IAPE + + + D +SFG++L E + P
Sbjct: 177 ---NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T TL
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCG 201
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + + + + T+ +
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 254
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 255 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 295
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 83 LIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 142
++++ ++++ +V+EYMP G L L S+ + + + + +V AL+ +H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLALDAIH--- 191
Query: 143 SAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT-LATIGCIAPE-YRR 200
S +IH D+KP N+LLD + L+DF + + M T + T I+PE +
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 201 KGRESTNG---DVYSFGIMLMETFTRKKP 226
+G + G D +S G+ L E P
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSLEKYLYSSNC---ILDIFQRL 125
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 126 NIMIDVASALEYLHFGYSA--QVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
+M + AL+ H V+H DLKP NV LD L DF +A++L + S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFA 173
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+T + T ++PE + + D++S G +L E
Sbjct: 174 KT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + +A+ Y+ +E LY +L
Sbjct: 85 CQRTLR----EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLK 137
Query: 121 IFQRLN-----IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLL 175
Q N + + L+Y+H SA V+H DLKP N+L++ + DF +A++
Sbjct: 138 SQQLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIA 194
Query: 176 TGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
E+ T+ +AT APE + T D++S G +L E + +
Sbjct: 195 DPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + Q++H D+KP N
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKH--QIMHRDVKPSN 145
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T +APE + S D++S G+
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 216 MLMETFTRKKPTDEIFNREM 235
L+E + P +E+
Sbjct: 202 SLVELAVGRYPIPPPDAKEL 221
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EYMP G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANI 323
Query: 157 LLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKG-RESTNGDVYSFGI 215
LLD++ +SD +A ++ ++ T G +APE +KG ++ D +S G
Sbjct: 324 LLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 216 MLMETFTRKKP 226
ML + P
Sbjct: 380 MLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANI 323
Query: 157 LLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKG-RESTNGDVYSFGI 215
LLD++ +SD +A ++ ++ T G +APE +KG ++ D +S G
Sbjct: 324 LLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 216 MLMETFTRKKP 226
ML + P
Sbjct: 380 MLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANI 323
Query: 157 LLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKG-RESTNGDVYSFGI 215
LLD++ +SD +A ++ ++ T G +APE +KG ++ D +S G
Sbjct: 324 LLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 216 MLMETFTRKKP 226
ML + P
Sbjct: 380 MLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 267 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANI 322
Query: 157 LLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKG-RESTNGDVYSFGI 215
LLD++ +SD +A ++ ++ T G +APE +KG ++ D +S G
Sbjct: 323 LLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 378
Query: 216 MLMETFTRKKP 226
ML + P
Sbjct: 379 MLFKLLRGHSP 389
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EYMP G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNIECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHG 106
++ E AVK+ Q G E EM+ + HRN++++I E+ LV E M G
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD-DNMVA- 164
S+ +++ ++ + ++ DVASAL++LH + + H DLKP N+L + N V+
Sbjct: 97 SILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSP 152
Query: 165 -HLSDFSIAK--LLTGEYQSMTQTQTLATIGC---IAPEYRRKGRESTN-----GDVYSF 213
+ DF + L G+ ++ + L G +APE E + D++S
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 214 GIML 217
G++L
Sbjct: 213 GVIL 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSLEKYLYSSNC---ILDIFQRL 125
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 126 NIMIDVASALEYLHFGYSA--QVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
+M + AL+ H V+H DLKP NV LD L DF +A++L +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDEDF 172
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ + T ++PE + + D++S G +L E
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 44/214 (20%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 138
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L E + + T ++PE + S D++S G+
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGL 194
Query: 216 MLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE---QCV 272
L+E + P P++ E++D ++ E +
Sbjct: 195 SLVEMAVGRYPRP-----------------PMAIFELLD----------YIVNEPPPKLP 227
Query: 273 SFVFNLAIE-----CTVESPEQRINAREIVAKLF 301
S VF+L + C +++P +R + ++++ F
Sbjct: 228 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 261
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ ++E + +S+ H++++ + +F +VLE SL + L+ L +
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 118
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + +YLH +VIH DLK N+ L++++ + DF +A + EY +
Sbjct: 119 YYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKK 173
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T IAPE K S DV+S G ++ K P + +E L+ N +
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 233
Query: 246 PISTMEVVDANLLSQ 260
+ V A+L+ +
Sbjct: 234 IPKHINPVAASLIQK 248
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ + E + KS+ + +++ +++F +VLE SL + + + R
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
M ++YLH + +VIH DLK N+ L+D+M + DF +A + E+ +
Sbjct: 131 -FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 184
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T IAPE K S D++S G +L K P
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
I + + ALE+LH S VIH D+KP NVL++ + DF I+ L S+ +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 186 QTLATIGC--------IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
GC I PE +KG S D++S GI ++E + P D
Sbjct: 212 ---IDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD 258
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ ++E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + +YLH +VIH DLK N+ L++++ + DF +A + EY +
Sbjct: 122 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKK 175
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T IAPE K S DV+S G ++ K P + +E L+ N +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 235
Query: 246 PISTMEVVDANLLSQ 260
+ V A+L+ +
Sbjct: 236 IPKHINPVAASLIQK 250
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPAFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 69 NIECEMMK------SIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 122
++EC M++ + H L + T +E V+EY+ G L ++ S + D+
Sbjct: 60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLS 118
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL-LTGEYQS 181
+ ++ L++LH S +++ DLK N+LLD + ++DF + K + G+ ++
Sbjct: 119 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175
Query: 182 MTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T IAPE + + + D +SFG++L E + P
Sbjct: 176 ---NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKAL--VLEYMPHGSLEKYLYSSNC---ILDIFQRL 125
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 126 NIMIDVASALEYLHFGYSA--QVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT 183
+M + AL+ H V+H DLKP NV LD L DF +A++L + +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSF 172
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ T ++PE + + D++S G +L E
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNIECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHG 106
++ E AVK+ Q G E EM+ + HRN++++I E+ LV E M G
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD-DNMVA- 164
S+ +++ ++ + ++ DVASAL++LH + + H DLKP N+L + N V+
Sbjct: 97 SILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSP 152
Query: 165 -HLSDFSIAK--LLTGEYQSMTQTQTLATIGC---IAPEYRRKGRESTN-----GDVYSF 213
+ DF + L G+ ++ + L G +APE E + D++S
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 214 GIML 217
G++L
Sbjct: 213 GVIL 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ ++E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + +YLH +VIH DLK N+ L++++ + DF +A + EY +
Sbjct: 122 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKK 175
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T IAPE K S DV+S G ++ K P + +E L+ N +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 235
Query: 246 PISTMEVVDANLLSQ 260
+ V A+L+ +
Sbjct: 236 IPKHINPVAASLIQK 250
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 2 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 56
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 115
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 173 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 205
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 28 QILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQCGRAFK------SFNIECEM 74
++ +F+ G + QF I S+ +E A K + RA + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
++ + H N+I + N L+LE + G L +L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 135 LEYLHFGYSAQVIHCDLKPINV-LLDDNM-VAHLS--DFSIAKLLTG--EYQSMTQTQTL 188
+ YLH + ++ H DLKP N+ LLD N+ + H+ DF +A + E++++
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-----F 179
Query: 189 ATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 2 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 56
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 115
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 173 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 74 MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 133
++K ++H+N++++ +++ LV E+ L+KY S N LD + + +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 134 ALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
L + H S V+H DLKP N+L++ N L++F +A+
Sbjct: 113 GLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 41/225 (18%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECE-MMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
++ ME AVKV + ++ + + E E +++ +H N+I + + + LV E M
Sbjct: 50 ATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG 105
Query: 106 GSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD 159
G L +K+ ++ + +EYLH S V+H DLKP N+L
Sbjct: 106 GELLDKILRQKFFSEREASF-------VLHTIGKTVEYLH---SQGVVHRDLKPSNILYV 155
Query: 160 DNM----VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
D + DF AK L E + T T +APE ++ D++S GI
Sbjct: 156 DESGNPECLRICDFGFAKQLRAE-NGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGI 213
Query: 216 MLMETFTRKKP--------TDEIFNR----EMTLKHWGNNWLPIS 248
+L P +EI R + TL G NW +S
Sbjct: 214 LLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS--GGNWNTVS 256
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 28 QILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQCGRAFK------SFNIECEM 74
++ +F+ G + QF I S+ +E A K + RA + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
++ + H N+I + N L+LE + G L +L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 135 LEYLHFGYSAQVIHCDLKPINV-LLDDNM-VAHLS--DFSIAKLLTG--EYQSMTQTQTL 188
+ YLH + ++ H DLKP N+ LLD N+ + H+ DF +A + E++++
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-----F 179
Query: 189 ATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ ++E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 125
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + +YLH +VIH DLK N+ L++++ + DF +A + EY +
Sbjct: 126 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKK 179
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T IAPE K S DV+S G ++ K P + +E L+ N +
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 239
Query: 246 PISTMEVVDANLLSQ 260
+ V A+L+ +
Sbjct: 240 IPKHINPVAASLIQK 254
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 28 QILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQCGRAFK------SFNIECEM 74
++ +F+ G + QF I S+ +E A K + RA + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
++ + H N+I + N L+LE + G L +L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 135 LEYLHFGYSAQVIHCDLKPINV-LLDDNM-VAHLS--DFSIAKLLTG--EYQSMTQTQTL 188
+ YLH + ++ H DLKP N+ LLD N+ + H+ DF +A + E++++
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-----F 179
Query: 189 ATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 162
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
Query: 216 MLMETFTRKKPTDEIFNREMTL 237
L+E + P +E+ L
Sbjct: 219 SLVEMAVGRYPIPPPDAKELEL 240
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M L +L + D
Sbjct: 85 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGA----D 131
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 132 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDF 188
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 189 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 44/185 (23%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEK 110
E + +FN+Q +F++FN E +++ + +L +VIST +
Sbjct: 69 ENIITIFNIQRPDSFENFN-EVYIIQELMQTDLHRVIST--------------------Q 107
Query: 111 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
L + I+Q L A++ LH + VIH DLKP N+L++ N + DF
Sbjct: 108 MLSDDHIQYFIYQTLR-------AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFG 157
Query: 171 IAKLL----------TGEYQSMTQTQTLATIGCIAPEYR-RKGRESTNGDVYSFGIMLME 219
+A+++ TG+ M + +AT APE + S DV+S G +L E
Sbjct: 158 LARIIDESAADNSEPTGQQSGM--VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
Query: 220 TFTRK 224
F R+
Sbjct: 216 LFLRR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 29/190 (15%)
Query: 41 VAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMM--KSIRHRNLIKVISTCSNEEFKAL 98
VA+ + + V V ++ G A N++ E++ +S+RH N+++ A+
Sbjct: 35 VARLMRDKLTKELVAVKYIERGAAIDE-NVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93
Query: 99 VLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKP 153
++EY G L + + +S + FQ+L S + Y H S Q+ H DLK
Sbjct: 94 IMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---SMQICHRDLKL 144
Query: 154 INVLLDDNMVAHLS--DFSIAKLLTGEYQSMTQTQTLATIGC---IAPE-YRRKGRESTN 207
N LLD + L DF +K S+ +Q +T+G IAPE R+ +
Sbjct: 145 ENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 208 GDVYSFGIML 217
DV+S G+ L
Sbjct: 199 ADVWSCGVTL 208
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 135
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 216 MLMETFTRKKPTDEIFNREMTL 237
L+E + P +E+ L
Sbjct: 192 SLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 135
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 216 MLMETFTRKKPTDEIFNREMTL 237
L+E + P +E+ L
Sbjct: 192 SLVEMAVGRYPIPPPDAKELEL 213
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 41/225 (18%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECE-MMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
++ ME AVKV + ++ + + E E +++ +H N+I + + + LV E M
Sbjct: 50 ATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG 105
Query: 106 GSL------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD 159
G L +K+ ++ + +EYLH S V+H DLKP N+L
Sbjct: 106 GELLDKILRQKFFSEREASF-------VLHTIGKTVEYLH---SQGVVHRDLKPSNILYV 155
Query: 160 DNM----VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
D + DF AK L E + T T +APE ++ D++S GI
Sbjct: 156 DESGNPECLRICDFGFAKQLRAE-NGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGI 213
Query: 216 MLMETFTRKKP--------TDEIFNR----EMTLKHWGNNWLPIS 248
+L P +EI R + TL G NW +S
Sbjct: 214 LLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS--GGNWNTVS 256
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 142
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T L
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCG 193
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 28 QILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQCGRAFK------SFNIECEM 74
++ +F+ G + QF I S+ +E A K + RA + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
++ + H N+I + N L+LE + G L +L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 135 LEYLHFGYSAQVIHCDLKPINV-LLDDNM-VAHLS--DFSIAKLLTG--EYQSMTQTQTL 188
+ YLH + ++ H DLKP N+ LLD N+ + H+ DF +A + E++++
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-----F 179
Query: 189 ATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 135
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 216 MLMETFTRKKPTDEIFNREMTL 237
L+E + P +E+ L
Sbjct: 192 SLVEMAVGRYPIPPPDAKELEL 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ + E + KS+ + +++ +++F +VLE SL + + + R
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
M ++YLH + +VIH DLK N+ L+D+M + DF +A + E+ +
Sbjct: 147 -FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 200
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T IAPE K S D++S G +L K P
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 205
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 206 ---LAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 135
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 216 MLMETFTRKKPTDEIFNREMTL 237
L+E + P +E+ L
Sbjct: 192 SLVEMAVGRYPIPPPDAKELEL 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 28 QILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQCGRAFK------SFNIECEM 74
++ +F+ G + QF I S+ +E A K + RA + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
++ + H N+I + N L+LE + G L +L + + + + + +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDG 127
Query: 135 LEYLHFGYSAQVIHCDLKPINV-LLDDNM-VAHLS--DFSIAKLLTG--EYQSMTQTQTL 188
+ YLH + ++ H DLKP N+ LLD N+ + H+ DF +A + E++++
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-----F 179
Query: 189 ATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
AM+V K ++ + E +++ ++H ++ +I L+LEY+ G L
Sbjct: 49 AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
L ++ + +++ AL +LH +I+ DLKP N++L+ L+D
Sbjct: 109 FMQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTD 164
Query: 169 FSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP- 226
F + K T T T TI +APE + + D +S G ++ + T P
Sbjct: 165 FGLCKE---SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Query: 227 TDEIFNREMTL 237
T E NR+ T+
Sbjct: 222 TGE--NRKKTI 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
I + + ALE+LH S VIH D+KP NVL++ + DF I+ L +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 186 QTLATIGC--------IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
GC I PE +KG S D++S GI ++E + P D
Sbjct: 171 ------GCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD 214
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 197
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 253
Query: 216 MLMETFTRKKPTDEIFNREMTL 237
L+E + P +E+ L
Sbjct: 254 SLVEMAVGRYPIPPPDAKELEL 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 48 SAMEVAVKVFNLQ--CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ E A + N + R + E + + ++H N++++ + S E L+ + +
Sbjct: 35 AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94
Query: 106 GSL-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
G L + YS S+CI I LE + + V+H +LKP N+
Sbjct: 95 GELFEDIVAREYYSEADASHCIQQI-------------LEAVLHCHQMGVVHRNLKPENL 141
Query: 157 LLDDNM---VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL + L+DF +A + GE Q+ T G ++PE RK D+++
Sbjct: 142 LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWAC 199
Query: 214 GIML 217
G++L
Sbjct: 200 GVIL 203
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 28 QILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQCGRAFK------SFNIECEM 74
++ +F+ G + QF I S+ +E A K + RA + E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 75 MKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
++ + H N+I + N L+LE + G L +L + + + + + +
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILDG 127
Query: 135 LEYLHFGYSAQVIHCDLKPINV-LLDDNM-VAHLS--DFSIAKLLTG--EYQSMTQTQTL 188
+ YLH + ++ H DLKP N+ LLD N+ + H+ DF +A + E++++
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-----F 179
Query: 189 ATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA---DMWSIGVI 207
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ + E + KS+ + +++ +++F +VLE SL + + + R
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
M ++YLH + +VIH DLK N+ L+D+M + DF +A + E+ +
Sbjct: 147 -FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 200
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T IAPE K S D++S G +L K P
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
LE +H + ++H DLKP N L+ D M+ L DF IA + + S+ + + + +
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 195 APEYRRKGRES-TNG----------DVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNN 243
PE + S NG DV+S G +L K P +I N+ L +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID- 282
Query: 244 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLF 301
P +E D + ++D+ V K C C P+QRI+ E++A +
Sbjct: 283 --PNHEIEFPD---IPEKDLQDVLK--C----------CLKRDPKQRISIPELLAHPY 323
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ ++E + +S+ H++++ + +F +VLE SL + L+ L +
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 142
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + +YLH +VIH DLK N+ L++++ + DF +A + EY +
Sbjct: 143 YYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKK 197
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T IAPE K S DV+S G ++ K P + +E L+ N +
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 257
Query: 246 PISTMEVVDANLLSQ 260
+ V A+L+ +
Sbjct: 258 IPKHINPVAASLIQK 272
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 64 AFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL---EKYLY----SSN 116
+ F E +++ I++ + +N + ++ EYM + S+ ++Y + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
C + I I+ V ++ Y+H + H D+KP N+L+D N LSDF
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDF------- 196
Query: 177 GEYQSMTQTQTLATIGC---IAPEYRRKGRESTNG---DVYSFGIMLMETFTRKKPTD-- 228
GE + M + + G + PE+ S NG D++S GI L F P
Sbjct: 197 GESEYMVDKKIKGSRGTYEFMPPEFFS-NESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
Query: 229 ----EIFN--REMTLKHW--GNNWL-PISTME-VVDANLLSQEDIHFVA 267
E+FN R +++ N++L P++ + N LS EDI F+
Sbjct: 256 ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK 304
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ + E + KS+ + +++ +++F +VLE SL + + + R
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
M ++YLH + +VIH DLK N+ L+D+M + DF +A + E+ +
Sbjct: 147 -FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 200
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
T IAPE K S D++S G +L K P
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYSSNCILD 120
K E ++ + H N+IK+ +LVLE + G L EK YS D
Sbjct: 93 KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD 152
Query: 121 IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDNMVAHLSDFSIAKLLTG 177
++ + A+ YLH ++H DLKP N+L + ++DF ++K++
Sbjct: 153 AVKQ------ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-- 201
Query: 178 EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
E+Q + +T T G APE R D++S GI+
Sbjct: 202 EHQVLMKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+LE + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 66 KSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 125
+ ++E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 145
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + +YLH +VIH DLK N+ L++++ + DF +A + EY +
Sbjct: 146 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKK 199
Query: 186 QTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLKHWGNNWL 245
T IAPE K S DV+S G ++ K P + +E L+ N +
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 259
Query: 246 PISTMEVVDANLLSQ 260
+ V A+L+ +
Sbjct: 260 IPKHINPVAASLIQK 274
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K I+H N+I + N+ L+LE + G L +L + + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQ 122
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GEYQSMTQ 184
+ + + YLH S Q+ H DLKP N++L D V + DF +A + E++++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-- 177
Query: 185 TQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 178 ---FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ + + Y H +V+H DLKP N+L++ ++DF +A+ + T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVT 163
Query: 191 IGCIAPEYRRKGRE-STNGDVYSFGIMLME 219
+ AP+ ++ ST D++S G + E
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 111
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDF 168
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K I+H N+I + N+ L+LE + G L +L + + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQ 122
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GEYQSMTQ 184
+ + + YLH S Q+ H DLKP N++L D V + DF +A + E++++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-- 177
Query: 185 TQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
T +APE Y G E+ D++S G++
Sbjct: 178 ---FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 205
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 206 ---LAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 142
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T L
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCG 193
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ + + Y H +V+H DLKP N+L++ ++DF +A+ + T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVT 163
Query: 191 IGCIAPEYRRKGRE-STNGDVYSFGIMLME 219
+ AP+ ++ ST D++S G + E
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 205
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 206 ---LAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 205
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 206 ---LAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ + + Y H +V+H DLKP N+L++ ++DF +A+ + T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVT 163
Query: 191 IGCIAPEYRRKGRE-STNGDVYSFGIMLME 219
+ AP+ ++ ST D++S G + E
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T L
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCG 201
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 73/194 (37%), Gaps = 52/194 (26%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL------YSSNCILDIFQR 124
E +MK + H N+ ++ +E++ LV+E G L L + C +D+ +
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 125 L---------------------------------NIMIDVASALEYLHFGYSAQVIHCDL 151
NIM + SAL YLH + + H D+
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDI 194
Query: 152 KPINVLLDDN--MVAHLSDFSIA----KLLTGEYQSMTQTQTLATIGCIAPEYRRKGRES 205
KP N L N L DF ++ KL GEY MT T +APE ES
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA--GTPYFVAPEVLNTTNES 252
Query: 206 TNG--DVYSFGIML 217
D +S G++L
Sbjct: 253 YGPKCDAWSAGVLL 266
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ + RH N+I + N+ +A +E M + Y+ D
Sbjct: 67 CQRTLR----EIKILLAFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 113
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDF 170
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 17/186 (9%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECE-MMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
++ ME AVK+ + ++ + E E +++ +H N+I + + ++ +V E M
Sbjct: 45 ATNMEFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100
Query: 106 GSL-EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM-- 162
G L +K L + ++ + +EYLH + V+H DLKP N+L D
Sbjct: 101 GELLDKILRQK--FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGN 155
Query: 163 --VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMET 220
+ DF AK L E + T T +APE + D++S G++L
Sbjct: 156 PESIRICDFGFAKQLRAE-NGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 221 FTRKKP 226
T P
Sbjct: 214 LTGYTP 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 40/214 (18%)
Query: 97 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
++ +E+M GSL++ L + I + I +++I V L YL + +++H D+KP N
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH--KIMHRDVKPSN 154
Query: 156 VLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGI 215
+L++ L DF ++ L SM + + T ++PE + S D++S G+
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 210
Query: 216 MLMETFTRKKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE---QCV 272
L+E + P G+ ++ E++D ++ E +
Sbjct: 211 SLVEMAVGRYPI-------------GSGSGSMAIFELLD----------YIVNEPPPKLP 247
Query: 273 SFVFNLAIE-----CTVESPEQRINAREIVAKLF 301
S VF+L + C +++P +R + ++++ F
Sbjct: 248 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 281
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 55 KVFNLQC--GRAFK----SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
K+F ++C +A K S E +++ I+H N++ + + LV++ + G L
Sbjct: 48 KLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL 107
Query: 109 -----EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DD 160
EK Y+ + ++ V A+ YLH ++H DLKP N+L D+
Sbjct: 108 FDRIVEKGFYTEKDASTLIRQ------VLDAVYYLH---RMGIVHRDLKPENLLYYSQDE 158
Query: 161 NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
+SDF ++K+ E + + T G +APE + S D +S G++
Sbjct: 159 ESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 225
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 226 ---LAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 27/202 (13%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
+ + AVK L+ RA + + C + S R ++ + + + +E + GS
Sbjct: 98 TGFQCAVKKVRLEVFRAEEL--MACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGS 152
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVAHL 166
L + + C+ + + L + LEYLH S +++H D+K NVLL D A L
Sbjct: 153 LGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAAL 208
Query: 167 SDFSIA----------KLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
DF A LLTG+Y T+T +APE DV+S M
Sbjct: 209 CDFGHAVCLQPDGLGKDLLTGDYIPGTETH-------MAPEVVLGRSCDAKVDVWSSCCM 261
Query: 217 LMETFTRKKPTDEIFNREMTLK 238
++ P + F + LK
Sbjct: 262 MLHMLNGCHPWTQFFRGPLCLK 283
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 51 EVAVKVF-NLQCGRAFKSFNIECEMMKSI--RHRNLIKVIS-----TCSNEEFKALVLEY 102
+VAVKVF + F+ E E+ +++ RH N++ I+ T S + L+ +Y
Sbjct: 62 KVAVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFIAADIKGTGSWTQL-YLITDY 116
Query: 103 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-YSAQ----VIHCDLKPINVL 157
+GSL YL S+ LD L + S L +LH +S Q + H DLK N+L
Sbjct: 117 HENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL 174
Query: 158 LDDNMVAHLSDFSIA-KLLTGEYQ-SMTQTQTLATIGCIAPEY------RRKGRESTNGD 209
+ N ++D +A K ++ + + + T + PE R + D
Sbjct: 175 VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMAD 234
Query: 210 VYSFGIMLMETFTR----------KKPTDEIFNREMTLKHWGNNWLPISTMEVVDANLLS 259
+YSFG++L E R + P ++ + + + E+V L
Sbjct: 235 MYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE---------DMREIVCIKKLR 285
Query: 260 QEDIHFVAKEQCVSFVFNLAIECTVESPEQRINAREIVAKLFKIRDS 306
+ + ++C+ + L EC +P R+ A + L K+ +S
Sbjct: 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 200 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 120
S E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 121 IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL---LDDNMVAHLSDFSIAKLLTG 177
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDF ++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 178 EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
E + T G +APE + S D +S G++
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ + RH N+I + N+ +A +E M + Y+ D
Sbjct: 67 CQRTLR----EIKILLAFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 113
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 170
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 27/202 (13%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 107
+ + AVK L+ RA + + C + S R ++ + + + +E + GS
Sbjct: 117 TGFQCAVKKVRLEVFRAEEL--MACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGS 171
Query: 108 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVAHL 166
L + + C+ + + L + LEYLH S +++H D+K NVLL D A L
Sbjct: 172 LGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAAL 227
Query: 167 SDFSIA----------KLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
DF A LLTG+Y T+T +APE DV+S M
Sbjct: 228 CDFGHAVCLQPDGLGKSLLTGDYIPGTETH-------MAPEVVLGRSCDAKVDVWSSCCM 280
Query: 217 LMETFTRKKPTDEIFNREMTLK 238
++ P + F + LK
Sbjct: 281 MLHMLNGCHPWTQFFRGPLCLK 302
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 120
S E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 121 IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL---LDDNMVAHLSDFSIAKLLTG 177
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDF ++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 178 EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
E + T G +APE + S D +S G++
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 68 FNIECEMMKSIRHRNLIKVI----STCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 123
F E E +K ++H N+++ ST ++ LV E G+L+ YL F+
Sbjct: 72 FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR-------FK 124
Query: 124 RLNIMI------DVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA-HLSDFSIAKLLT 176
I + + L++LH + +IH DLK N+ + + + D +A L
Sbjct: 125 VXKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183
Query: 177 GEYQSMTQTQTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFN 232
+ + T APE Y K ES DVY+FG +E T + P E N
Sbjct: 184 ASFAKAV----IGTPEFXAPEXYEEKYDESV--DVYAFGXCXLEXATSEYPYSECQN 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 120
S E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 121 IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL---LDDNMVAHLSDFSIAKLLTG 177
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDF ++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 178 EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
E + T G +APE + S D +S G++
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 67 SFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 120
S E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 121 IFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL---LDDNMVAHLSDFSIAKLLTG 177
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDF ++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 178 EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
E + T G +APE + S D +S G++
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 207 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 111
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDF 168
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 138
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYR 199
+I+ DLK NVLLD L+D+ + K G T + T IAPE
Sbjct: 139 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 200 RKGRESTNGDVYSFGIMLMETFTRKKPTD 228
R + D ++ G+++ E + P D
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 123
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYR 199
+I+ DLK NVLLD L+D+ + K G T + T IAPE
Sbjct: 124 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 200 RKGRESTNGDVYSFGIMLMETFTRKKPTD 228
R + D ++ G+++ E + P D
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 127
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYR 199
+I+ DLK NVLLD L+D+ + K G T + T IAPE
Sbjct: 128 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 200 RKGRESTNGDVYSFGIMLMETFTRKKPTD 228
R + D ++ G+++ E + P D
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 111
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDF 168
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 115
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDF 172
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+VLEY P G + +L + R + EYLH S +I+ DLKP N+L
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+D ++DF AK + G + T +APE + D ++ G+++
Sbjct: 175 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEY-----LAPEIILSKGYNKAVDWWALGVLI 229
Query: 218 ME 219
E
Sbjct: 230 YE 231
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA +E+L S + IH DL N+LL + V + DF +A+ + + + +
Sbjct: 209 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+SFG++L E F+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 100 LEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
+E+ G+LE+++ LD L + + ++Y+H S ++I+ DLKP N+ L
Sbjct: 99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFL 155
Query: 159 DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLM 218
D + DF L+T + ++ T+ ++PE D+Y+ G++L
Sbjct: 156 VDTKQVKIGDFG---LVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 212
Query: 219 E 219
E
Sbjct: 213 E 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 170
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYR 199
+I+ DLK NVLLD L+D+ + K G T + T IAPE
Sbjct: 171 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 200 RKGRESTNGDVYSFGIMLMETFTRKKPTD 228
R + D ++ G+++ E + P D
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ E AVKV N + + I E E++K + H N++K+ + +V E
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE---- 101
Query: 106 GSLEKYLYSSNCILD-IFQR--------LNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
LY+ + D I +R I+ V S + Y+H ++H DLKP N+
Sbjct: 102 ------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENI 152
Query: 157 LLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL+ + + DF ++ Q+ + T IAPE R G DV+S
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSA 208
Query: 214 GIML 217
G++L
Sbjct: 209 GVIL 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 69 NIECEMM--KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDI 121
N++ E++ +S+RH N+++ A+V+EY G L + + +S +
Sbjct: 60 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 119
Query: 122 FQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS--DFSIAKLLTGEY 179
FQ+L S + Y H + QV H DLK N LLD + L DF +K
Sbjct: 120 FQQL------ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------ 164
Query: 180 QSMTQTQTLATIGC---IAPE-YRRKGRESTNGDVYSFGIML 217
S+ +Q +T+G IAPE +K + DV+S G+ L
Sbjct: 165 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 69 NIECEMM--KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDI 121
N++ E++ +S+RH N+++ A+V+EY G L + + +S +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 122 FQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL--SDFSIAKLLTGEY 179
FQ+L S + Y H + QV H DLK N LLD + L +DF +K
Sbjct: 121 FQQL------ISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK------ 165
Query: 180 QSMTQTQTLATIGC---IAPE-YRRKGRESTNGDVYSFGIML 217
S+ +Q + +G IAPE +K + DV+S G+ L
Sbjct: 166 ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ E AVKV N + + I E E++K + H N++K+ + +V E
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE---- 101
Query: 106 GSLEKYLYSSNCILD-IFQR--------LNIMIDVASALEYLHFGYSAQVIHCDLKPINV 156
LY+ + D I +R I+ V S + Y+H ++H DLKP N+
Sbjct: 102 ------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENI 152
Query: 157 LLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSF 213
LL+ + + DF ++ Q+ + T IAPE R G DV+S
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSA 208
Query: 214 GIML 217
G++L
Sbjct: 209 GVIL 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 69 NIECEMM--KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDI 121
N++ E++ +S+RH N+++ A+V+EY G L + + +S +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 122 FQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS--DFSIAKLLTGEY 179
FQ+L S + Y H + QV H DLK N LLD + L DF +K
Sbjct: 121 FQQL------ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------ 165
Query: 180 QSMTQTQTLATIGC---IAPE-YRRKGRESTNGDVYSFGIML 217
S+ +Q +T+G IAPE +K + DV+S G+ L
Sbjct: 166 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+++D ++DF +AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
V V F G + + E + ++H ++++++ T S++ +V E+M
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD------- 109
Query: 112 LYSSNCILDIFQRLNIMIDVASA---------LEYLHFGYSAQVIHCDLKPINVLL---D 159
++ +I +R + + A LE L + + +IH D+KP NVLL +
Sbjct: 110 --GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKE 167
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
++ L DF +A L GE + + T +APE ++ DV+ G++L
Sbjct: 168 NSAPVKLGDFGVAIQL-GE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---- 126
E +++ RH N+I + N+ +A +E M + Y+ D+++ L
Sbjct: 75 EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETDLYKLLKTQHL 125
Query: 127 -------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEY 179
+ + L+Y+H SA V+H DLKP N+LL+ + DF +A++ ++
Sbjct: 126 SNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
Query: 180 QSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
T+ +AT APE + T D++S G +L E + +
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 85 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 131
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 132 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 188
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 189 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 67 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 113
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 170
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLN 126
F E E+MKS+ H N+I++ T + LV+E G L E+ ++ +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAAR 110
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVL-LDDNMVAHLS--DFSI-AKLLTGEYQSM 182
IM DV SA+ Y H V H DLKP N L L D+ + L DF + A+ G+ M
Sbjct: 111 IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---M 164
Query: 183 TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLK 238
+T+ + T ++P+ +G D +S G+M+ P + E+ LK
Sbjct: 165 MRTK-VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 218
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 111
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 168
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 115
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 63 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 109
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 110 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 166
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 167 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 73 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 119
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 120 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 176
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 177 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 111
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 168
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 23/180 (12%)
Query: 48 SAMEVAVKVFNLQCGRAFKSFNI--ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
+ E AVKV N + + I E E++K + H N++K+ + +V E
Sbjct: 46 TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105
Query: 106 GSL-----EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD 160
G L ++ +S + I ++ V S + Y+H ++H DLKP N+LL+
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH---KHNIVHRDLKPENILLES 156
Query: 161 NMVA---HLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ DF ++ Q+ + T IAPE R G DV+S G++L
Sbjct: 157 KEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 115
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 116 LYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 70 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 116
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 117 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 173
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 174 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 63 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 109
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 110 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 166
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 167 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 71 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 117
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 118 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 174
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 175 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 62 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 108
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 109 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 165
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 166 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 68 FNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLN 126
F E E+MKS+ H N+I++ T + LV+E G L E+ ++ +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAAR 127
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVL-LDDNMVAHLS--DFSI-AKLLTGEYQSM 182
IM DV SA+ Y H V H DLKP N L L D+ + L DF + A+ G+ M
Sbjct: 128 IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---M 181
Query: 183 TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLK 238
+T+ + T ++P+ +G D +S G+M+ P + E+ LK
Sbjct: 182 MRTK-VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 235
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 115
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ T+ +AT APE + T D++S G +L E + +
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+++D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+++D ++DF +AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMT- 183
L+I + +A A+E+LH S ++H DLKP N+ + V + DF + + + + T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 184 ---------QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T + T ++PE S D++S G++L E
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++K ++HRN+I++ S + L+ EY L+KY+ + D+ R+ I
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSF 137
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLL-----DDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + ++F +S + +H DLKP N+LL + V + DF +A+ + T
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--T 195
Query: 186 QTLATIGCIAPEYRRKGRE-STNGDVYS----FGIMLMET--FTRKKPTDEIFN 232
+ T+ PE R ST+ D++S + MLM+T F D++F
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 62 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 121
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 122 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 176
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 177 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 121 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 176 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+++D ++DF AK + G +T L
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG------RTWXLCG 200
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 80 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 139
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 140 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 194
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 195 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 133 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 188 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 121 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 176 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 132
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 133 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 188 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 69 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 128
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 129 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 183
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 184 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 49 AMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 108
AM+V K ++ + E +++ ++H ++ +I L+LEY+ G L
Sbjct: 49 AMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 109 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
L ++ + +++ AL +LH +I+ DLKP N++L+ L+D
Sbjct: 109 FMQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTD 164
Query: 169 FSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP- 226
F + K T T TI +APE + + D +S G ++ + T P
Sbjct: 165 FGLCKE---SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Query: 227 TDEIFNREMTL 237
T E NR+ T+
Sbjct: 222 TGE--NRKKTI 230
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 65 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 124
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 125 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 179
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 180 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 219
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 18 VFRRSQTSDFQILNFFICGVIIPVAQFLI-------SSAMEVAVKVFNLQ----CGRAFK 66
VFR+ D+ + G + QF + S+ ++ A K + R
Sbjct: 3 VFRQENVDDY-----YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS 57
Query: 67 SFNIECE--MMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 124
+IE E ++K I+H N+I + N+ L+ E + G L +L + + +
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EA 116
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVA----HLSDFSIAKLLT--GE 178
+ + + + YLH S Q+ H DLKP N++L D V + DF +A + E
Sbjct: 117 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 179 YQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFGIM 216
++++ T +APE Y G E+ D++S G++
Sbjct: 174 FKNI-----FGTPEFVAPEIVNYEPLGLEA---DMWSIGVI 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 155 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 177 GE 178
GE
Sbjct: 210 GE 211
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
I + + ALE+LH S VIH D+KP NVL++ DF I+ L +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 186 QTLATIGC--------IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
GC I PE +KG S D++S GI +E + P D
Sbjct: 198 ------GCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYD 241
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 22/181 (12%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKA----LVLEYMPHGSLE---KYLYSSNCILDIFQ 123
E +M + H N++++++ C E L+L + G+L + L L Q
Sbjct: 76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ 135
Query: 124 RLNIMIDVASALEYLHF-GYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL----LTGE 178
L +++ + LE +H GY+ H DLKP N+LL D L D + G
Sbjct: 136 ILWLLLGICRGLEAIHAKGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 179 YQSMTQTQTLA---TIGCIAPEYRRKGRE---STNGDVYSFGIMLMETFTRKKPTDEIFN 232
Q++T A TI APE DV+S G +L + P D +F
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
Query: 233 R 233
+
Sbjct: 252 K 252
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 97 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 156
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 157 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 211
Query: 177 GE 178
GE
Sbjct: 212 GE 213
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 154
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 155 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 210 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 99 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 158
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 159 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 213
Query: 177 GE 178
GE
Sbjct: 214 GE 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 42/190 (22%)
Query: 51 EVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVIS------TCSNEEFKALVLEYMP 104
EVA+K LQ R FK N E ++M+ ++H N++ + + +E F LVLEY+P
Sbjct: 66 EVAIKKV-LQDKR-FK--NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121
Query: 105 HGSLEKYLYSSNCILDIFQRLNI------MIDVASALEYLHFGYSAQVIHCDLKPINVLL 158
E +S + Q + + M + +L Y+H S + H D+KP N+LL
Sbjct: 122 ----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLL 174
Query: 159 D-DNMVAHLSDFSIAK-LLTGEYQSMTQTQTLATIGCIAPEYRRKGR-------ESTNGD 209
D + V L DF AK L+ GE + I Y R +TN D
Sbjct: 175 DPPSGVLKLIDFGSAKILIAGE----------PNVSXICSRYYRAPELIFGATNYTTNID 224
Query: 210 VYSFGIMLME 219
++S G ++ E
Sbjct: 225 IWSTGCVMAE 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
H N++K+ ++ LV+E + G L + + + + IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 140 FGYSAQVIHCDLKPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAP 196
V+H DLKP N+L +DN+ + DF A+L + Q + T+ AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
Query: 197 EYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
E + + D++S G++L + + P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+V+EY P G + +L + R + EYLH S +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+D ++DF AK + G + T +APE + D ++ G+++
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-----LAPEIILSKGYNKAVDWWALGVLI 229
Query: 218 ME 219
E
Sbjct: 230 YE 231
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 78 IRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 137
+ RN +K + + + EY + +L ++S N + + + AL Y
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 138 LHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK-------LLTGEYQSMTQ-----T 185
+H S +IH +LKP N+ +D++ + DF +AK +L + Q++ T
Sbjct: 132 IH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 186 QTLATIGCIAPE-YRRKGRESTNGDVYSFGIMLME 219
+ T +A E G + D YS GI+ E
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+++D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 140 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 199
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 200 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 254
Query: 177 GE 178
GE
Sbjct: 255 GE 256
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+++D ++DF AK + G +T L
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCG 201
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 89 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 148
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 149 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
Query: 177 GE 178
GE
Sbjct: 204 GE 205
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 121 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 176 GE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 70 IECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 129
+ C + S R ++ + + + +E + GSL + + C+ + + L +
Sbjct: 116 VACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLG 171
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVAHLSDFSIA----------KLLTGE 178
LEYLH + +++H D+K NVLL D A L DF A LLTG+
Sbjct: 172 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 179 YQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLK 238
Y T+T +APE D++S M++ P + F + LK
Sbjct: 229 YIPGTETH-------MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 74 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 133
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 134 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 188
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 189 GE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 69 NIECEMMKSIRHRNLIKV------ISTCSNEEFKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ +E + LVL+Y+P + Y + +
Sbjct: 66 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 125
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 126 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 180
Query: 177 GE 178
GE
Sbjct: 181 GE 182
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEF 95
GV V + EV +KV + +SF MM + H++L+ C +
Sbjct: 27 GVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86
Query: 96 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
LV E++ GSL+ YL + ++I +L + +A+A +HF +IH ++ N
Sbjct: 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFLEENTLIHGNVCAKN 143
Query: 156 VLL 158
+LL
Sbjct: 144 ILL 146
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 70 IECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 129
+ C + S R ++ + + + +E + GSL + + C+ + + L +
Sbjct: 102 VACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLG 157
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVAHLSDFSIA----------KLLTGE 178
LEYLH + +++H D+K NVLL D A L DF A LLTG+
Sbjct: 158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 179 YQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLK 238
Y T+T +APE D++S M++ P + F + LK
Sbjct: 215 YIPGTETH-------MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 125 LNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIA----------KL 174
L+I I +A A+E+LH S ++H DLKP N+ + V + DF + +
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 175 LTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
LT T + T ++PE S D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 45 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 100
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 155
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 156 LKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 211 IWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 45 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 100
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 155
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 156 LKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 211 IWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 51 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 106
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 107 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 161
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 162 LKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 216
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 217 IWSVGCIMAELLTGR 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+V+EY P G + +L + R + EYLH S +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-ATIGCIAPEYRRKGRESTNGDVYSFGIM 216
+D ++DF AK + G +T L T +APE + D ++ G++
Sbjct: 175 IDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 217 LME 219
+ E
Sbjct: 229 IYE 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI- 119
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 120 --QMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHG 106
++ +++A K+ + + + E +M + H NLI++ ++ LV+EY+ G
Sbjct: 112 ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLL--DDNMVA 164
L + + L + M + + ++H Y ++H DLKP N+L D
Sbjct: 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQI 228
Query: 165 HLSDFSIAKLLTGEYQSMTQTQ-TLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
+ DF +A+ Y+ + + T +APE S D++S G++
Sbjct: 229 KIIDFGLAR----RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 70 IECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 129
+ C + S R ++ + + + +E + GSL + + C+ + + L +
Sbjct: 118 VACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLG 173
Query: 130 DVASALEYLHFGYSAQVIHCDLKPINVLL-DDNMVAHLSDFSIA----------KLLTGE 178
LEYLH + +++H D+K NVLL D A L DF A LLTG+
Sbjct: 174 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 179 YQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKPTDEIFNREMTLK 238
Y T+T +APE D++S M++ P + F + LK
Sbjct: 231 YIPGTETH-------MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+V+EY P G + +L + R + EYLH S +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+D ++DF AK + G + T +APE + D ++ G+++
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-----LAPEIILSKGYNKAVDWWALGVLI 229
Query: 218 ME 219
E
Sbjct: 230 YE 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLA- 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T LA
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAG 200
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNAMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 54/142 (38%), Gaps = 26/142 (18%)
Query: 107 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHL 166
SL+++ + L Q + D AL +LH S ++H D+KP N+ L L
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198
Query: 167 SDFS----IAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
DF + GE Q +APE +G T DV+S G+ ++E
Sbjct: 199 GDFGLLVELGTAGAGEVQEGDPR-------YMAPEL-LQGSYGTAADVFSLGLTILEVAC 250
Query: 223 RKKPTDEIFNREMTLKHWGNNW 244
M L H G W
Sbjct: 251 -----------NMELPHGGEGW 261
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + S D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF + + E T +AT APE D
Sbjct: 151 LKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMT 183
IM D+ +A+++LH S + H D+KP N+L + + V L+DF AK T Q+
Sbjct: 114 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNAL 167
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
QT T +APE + + D++S G+++
Sbjct: 168 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---- 126
E ++K + H N++K+ ++ LV+E G L +I R+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNEV 136
Query: 127 ----IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEY 179
I+ V S + YLH ++H DLKP N+LL+ + + + DF ++ + +
Sbjct: 137 DAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193
Query: 180 QSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ + L T IAPE RK + DV+S G++L
Sbjct: 194 K---MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVIL 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G T TL
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCG 221
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLL---DDNMVAHLSDFSIAKLLTGEYQSMT 183
IM D+ +A+++LH S + H D+KP N+L + + V L+DF AK T Q+
Sbjct: 133 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNAL 186
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
QT T +APE + + D++S G+++
Sbjct: 187 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 118
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K G T T
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 173
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K + ++ T+ T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKT 164
Query: 191 IGCIAPEY 198
C PEY
Sbjct: 165 F-CGTPEY 171
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---I 127
E ++K + H N++K+ ++ LV+E G L + + F ++ I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 126
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQ-SMT 183
M V S YLH ++H DLKP N+LL+ + + + DF L+ ++
Sbjct: 127 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFG----LSAHFEVGGK 179
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ L T IAPE RK + DV+S G++L
Sbjct: 180 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVIL 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K G T T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 37 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 92
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 93 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 147
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 148 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 202
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 203 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 115
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ + +AT APE + T D++S G +L E + +
Sbjct: 173 GLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 61 CGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 120
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 70 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 116
Query: 121 IFQRLN-----------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF 169
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 117 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 173
Query: 170 SIAKLLTGEYQSMT-QTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTRK 224
+A++ ++ + +AT APE + T D++S G +L E + +
Sbjct: 174 GLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 38 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 93
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 94 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 148
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 149 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 203
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 204 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 36 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 91
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 146
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 202 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 47 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 102
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 157
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 213 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTC----S 91
A F + + VAVK + R F+S E ++K ++H N+I ++ S
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 92 NEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 136
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D+ ++DF AK + G +T L
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG------RTWXLCG 187
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 42 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 97
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 152
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 153 LKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 208 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTC----S 91
A F + + VAVK + R F+S E ++K ++H N+I ++ S
Sbjct: 46 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 101
Query: 92 NEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 156
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 157 LKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 212 IWSVGCIMAELLTGR 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 69 NIECEMMKSIRHRNLIKV----ISTCSNEE--FKALVLEYMP---HGSLEKYLYSSNCIL 119
N E ++M+ + H N++++ S+ ++ + LVL+Y+P + Y + +
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 120 DIFQRLNIMIDVASALEYLH-FGYSAQVIHCDLKPINVLLD-DNMVAHLSDFSIAK-LLT 176
I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DF AK L+
Sbjct: 121 VIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLME 219
GE + + APE + T+ DV+S G +L E
Sbjct: 176 GE----PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 47 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 102
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 157
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 213 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K + ++ T+ T
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKT 167
Query: 191 IGCIAPEY 198
C PEY
Sbjct: 168 F-CGTPEY 174
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 126 NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQT 185
+ + + AL YL + VIH D+KP N+LLD+ L DF I+ L +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 186 QTLATIGC--IAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
A + I P K DV+S GI L+E T + P
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K G T T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 204 --ALAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 37 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 92
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 93 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 147
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 148 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 202
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 203 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K + ++ T+ T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKT 164
Query: 191 IGCIAPEY 198
C PEY
Sbjct: 165 F-CGTPEY 171
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 45 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 100
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 155
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 156 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 211 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
S T + T APE N D++S G+++ E
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 45 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 100
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 155
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 156 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 211 IWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 39 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 94
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 95 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 149
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 150 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 204
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 205 IWSVGCIMAELLTGR 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 120
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 59 HAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 113
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 114 ME---LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 168 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 27 FQILNFFICGVIIPV-AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIR 79
+Q L+ G V + + + S +++AVK + R F+S E ++K ++
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVK----KLSRPFQSIIHAKRTYRELRLLKHMK 108
Query: 80 HRNLIKVI----STCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 134
H N+I ++ S EEF + L ++ L + D Q L + +
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRG 166
Query: 135 LEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCI 194
L+Y+H SA +IH DLKP N+ ++++ + DF +A+ E T +AT
Sbjct: 167 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYR 218
Query: 195 APEYRRKGRE-STNGDVYSFGIMLMETFTRK 224
APE + D++S G ++ E T +
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTC----S 91
A F + + VAVK + R F+S E ++K ++H N+I ++ S
Sbjct: 47 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 102
Query: 92 NEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 157
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 213 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---I 127
E ++K + H N++K+ ++ LV+E G L + + F ++ I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 109
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQ-SMT 183
M V S YLH ++H DLKP N+LL+ + + + DF L+ ++
Sbjct: 110 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFG----LSAHFEVGGK 162
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ L T IAPE RK + DV+S G++L
Sbjct: 163 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVIL 195
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
S T + T APE N D++S G+++ E
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + V+EY G L +L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SALEYLH S V++ D+K N++LD + ++DF + K G T T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 42 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 97
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 152
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 208 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 144
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTL-A 189
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T L
Sbjct: 145 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCG 195
Query: 190 TIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
T +APE + D ++ G+++ E
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 42 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 97
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 152
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 208 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 59 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 114
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 115 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 169
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 170 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 225 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 60 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 115
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 116 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 170
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 226 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 46 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 101
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 156
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 212 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 42 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 97
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 152
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 153 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 208 IWSVGCIMAELLTGR 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKV--------------ISTCSNEEFKA 97
VA+K L ++ K E ++++ + H N++KV + + +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+V EYM L L +L+ RL M + L+Y+H SA V+H DLKP N+
Sbjct: 99 IVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKYIH---SANVLHRDLKPANLF 152
Query: 158 LD-DNMVAHLSDFSIAKLLTGEYQSMTQ-TQTLATIGCIAPEYRRKGRESTNG-DVYSFG 214
++ +++V + DF +A+++ Y ++ L T +P T D+++ G
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG 212
Query: 215 IMLMETFTRK 224
+ E T K
Sbjct: 213 CIFAEMLTGK 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 47 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 102
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 157
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 158 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 213 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 51 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 106
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 107 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 161
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 162 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 216
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 217 IWSVGCIMAELLTGR 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 52 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 107
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 108 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 162
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 218 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 52 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 107
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 108 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 162
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 218 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 63 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 118
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 119 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 173
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 174 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 228
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 229 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 120
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 121 ME---LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE--- 203
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 46 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 101
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 156
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 212 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 148 HCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQ-TQTLATIGCIAPEYRRKGREST 206
H D+KP N+L+ + A+L DF IA T E +TQ T+ T+ APE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDE--KLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 207 NGDVYSFGIMLMETFTRKKP 226
D+Y+ +L E T P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 170
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 225
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 226 ---LAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 174
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T+ T +APE + + D++S G+++
Sbjct: 175 -TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------- 198
Query: 191 IGCIAPEYRRKGRESTNG-----DVYSFGIMLME 219
C PEY + G D ++ G+++ E
Sbjct: 199 --CGTPEYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFN------LQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + + R ++ E ++K ++H N+I ++ +
Sbjct: 52 AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----ELRLLKHMKHENVIGLLDVFTPARS 107
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 108 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 162
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 163 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 218 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 26/161 (16%)
Query: 69 NIECEMM--KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDI 121
N++ E++ +S+RH N+++ A+V+EY G L + + +S +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 122 FQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS----DFSIAKLLTG 177
FQ+L S + Y H + QV H DLK N LLD + L +S + +L
Sbjct: 121 FQQL------ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS 171
Query: 178 EYQSMTQTQTLATIGCIAPE-YRRKGRESTNGDVYSFGIML 217
+ +S T+ T IAPE +K + DV+S G+ L
Sbjct: 172 QPKS-----TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 36 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 91
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + + D Q L + + L+Y+H SA +IH D
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 146
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 202 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 36 GVIIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEF 95
GV V + EV +KV + +SF MM + H++L+ C +
Sbjct: 27 GVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDE 86
Query: 96 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPIN 155
LV E++ GSL+ YL + ++I +L + +A A +HF +IH ++ N
Sbjct: 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFLEENTLIHGNVCAKN 143
Query: 156 VLL 158
+LL
Sbjct: 144 ILL 146
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 205
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 206 ---LAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 140
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQT 187
V S + Y+H +++H DLKP N+LL+ + + DF ++ S
Sbjct: 141 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDK 194
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ T IAPE G DV+S G++L
Sbjct: 195 IGTAYYIAPEVLH-GTYDEKCDVWSTGVIL 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 36 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 91
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 146
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 202 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 138 LHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE 197
LH + A V+H DL P N+LL DN + DF++A+ T + +T + APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPE 203
Query: 198 YRRKGRESTN-GDVYSFGIMLMETFTRK 224
+ + T D++S G ++ E F RK
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 127 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 181
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 182 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 176
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 177 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 138 LHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE 197
LH + A V+H DL P N+LL DN + DF++A+ T + +T + APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPE 203
Query: 198 YRRKGRESTN-GDVYSFGIMLMETFTRK 224
+ + T D++S G ++ E F RK
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 180
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 181 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 175
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 176 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------- 198
Query: 191 IGCIAPEY 198
C PEY
Sbjct: 199 --CGTPEY 204
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 182
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 183 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + D+ +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 166 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 220
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 221 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 174
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 175 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 50 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 105
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 106 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 160
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 161 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 215
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 216 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 247
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 59 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 114
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 115 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 169
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 170 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 225 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKA------LVLEYMPHGSLEKYLYSSN 116
RA++ E ++K +RH N+I ++ + +E LV+ +M L K +
Sbjct: 70 RAYR----ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK 124
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
D Q L + + L Y+H +A +IH DLKP N+ ++++ + DF +A+
Sbjct: 125 LGEDRIQFL--VYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 177 GE------------------YQSMTQTQTLATIGCIAPE 197
E + TQT + ++GCI E
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 176
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 177 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 17/186 (9%)
Query: 47 SSAMEVAVKVFNLQCGRAFKSFNIECE-MMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 105
++ E AVK+ + ++ + E E +++ +H N+I + + ++ +V E
Sbjct: 45 ATNXEFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKG 100
Query: 106 GSL-EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNM-- 162
G L +K L + ++ + +EYLH + V+H DLKP N+L D
Sbjct: 101 GELLDKILRQK--FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGN 155
Query: 163 --VAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMET 220
+ DF AK L E + T T +APE + D++S G++L
Sbjct: 156 PESIRICDFGFAKQLRAE-NGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 221 FTRKKP 226
T P
Sbjct: 214 LTGYTP 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 60 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 115
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 116 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 170
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 226 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 136 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 190
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 191 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 46 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 101
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 156
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 157 LKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 212 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
IM + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 172 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 226
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
T T +APE + + D++S G+++
Sbjct: 227 -TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 63 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 118
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 119 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 173
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E +AT APE D
Sbjct: 174 LKPSNLAVNEDCELKILDFGLARHTDDEMXGY-----VATRWYRAPEIMLNWMHYNQTVD 228
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 229 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 125
H N++ ++ C+ ++ EY +G L +L +S I++ +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 126 ---NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSM 182
+ VA + +L S IH DL N+LL + + DF +A+ + + +
Sbjct: 162 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 183 TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+S+GI L E F+
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 177 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+S+GI L E F+
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQT 187
V S + Y+H +++H DLKP N+LL+ + + DF ++ S
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDK 188
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ T IAPE G DV+S G++L
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVIL 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
V+E++ G L ++ S + R ++ SAL +LH +I+ DLK NVL
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH---DKGIIYRDLKLDNVL 156
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
LD L+DF + K G +T T IAPE ++ D ++ G++L
Sbjct: 157 LDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLL 214
Query: 218 METFTRKKP-----TDEIF----NREMTLKHW 240
E P D++F N E+ W
Sbjct: 215 YEMLCGHAPFEAENEDDLFEAILNDEVVYPTW 246
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
VA + +L S IH DL N+LL + + DF +A+ + + + +
Sbjct: 172 VAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ +APE + DV+S+GI L E F+
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 38/185 (20%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINV---------LLDDNMVAHLSDFSIAKLLTGEYQS---------MTQTQTLATIG 192
LKP N+ +LD + H D + T Y++ QT + ++G
Sbjct: 151 LKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 193 CIAPE 197
CI E
Sbjct: 211 CIMAE 215
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 80 HRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 125
H N++ ++ C+ ++ EY +G L +L +S I++ +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 126 ---NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSM 182
+ VA + +L S IH DL N+LL + + DF +A+ + + +
Sbjct: 146 DLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 183 TQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + +APE + DV+S+GI L E F+
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 36/175 (20%)
Query: 51 EVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVI----STCSNEEFKALVL 100
+VAVK + R F+S E ++K ++H N+I ++ S E+F + L
Sbjct: 55 KVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYL 110
Query: 101 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD 160
G+ + S + D + ++ + L+Y+H SA +IH DLKP NV +++
Sbjct: 111 VTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNE 166
Query: 161 NMVAHLSDFSIAKL----LTG--------------EYQSMTQTQTLATIGCIAPE 197
+ + DF +A+ +TG + QT + ++GCI E
Sbjct: 167 DSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 19 FRRSQTSDFQILNFFICGVIIPVAQF-LISS--AMEVAVKVFNLQCGRAFK-SFNIECEM 74
F R++ S + L G ++ + LI S AM VAVK+ + + E ++
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 102
Query: 75 MKSI-RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQ 123
+ + H N++ ++ C+ ++ EY +G L +L +S I++ +
Sbjct: 103 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 124 RL-------NIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
+ VA + +L S IH DL N+LL + + DF +A+ +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFT 222
+ + + + +APE + DV+S+GI L E F+
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 26/161 (16%)
Query: 69 NIECEMM--KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDI 121
N++ E++ +S+RH N+++ A+V+EY G L + + +S +
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 122 FQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS----DFSIAKLLTG 177
FQ+L S + Y H + QV H DLK N LLD + L +S + +L
Sbjct: 121 FQQL------ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS 171
Query: 178 EYQSMTQTQTLATIGCIAPE-YRRKGRESTNGDVYSFGIML 217
+ + T+ T IAPE +K + DV+S G+ L
Sbjct: 172 QPKD-----TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 38/185 (20%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINV---------LLDDNMVAHLSDFSIAKLLTGEYQS---------MTQTQTLATIG 192
LKP N+ +LD + H D + T Y++ QT + ++G
Sbjct: 151 LKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 193 CIAPE 197
CI E
Sbjct: 211 CIMAE 215
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 158
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQT 187
V S + Y+H +++H DLKP N+LL+ + + DF ++ S
Sbjct: 159 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDK 212
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ T IAPE G DV+S G++L
Sbjct: 213 IGTAYYIAPEVLH-GTYDEKCDVWSTGVIL 241
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGE 178
IM + A++YLH S + H D+KP N+L N + L+DF AK TGE
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++++ L+K+ + + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ EYLH S +I+ DLKP N+++D ++DF AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-- 204
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+APE + D ++ G+++ E
Sbjct: 205 ---LAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK 224
++S G ++ E T +
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 36 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 91
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 146
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E +AT APE D
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATRWYRAPEIMLNWMHYNQTVD 201
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 202 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 157
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQT 187
V S + Y+H +++H DLKP N+LL+ + + DF ++ S
Sbjct: 158 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDK 211
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ T IAPE G DV+S G++L
Sbjct: 212 IGTAYYIAPEVLH-GTYDEKCDVWSTGVIL 240
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
S T + T APE N D++S G ++ E
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 38/185 (20%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINV---------LLDDNMVAHLSDFSIAKLLTGEYQS---------MTQTQTLATIG 192
LKP N+ +LD + H D + T Y++ QT + ++G
Sbjct: 151 LKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 193 CIAPE 197
CI E
Sbjct: 211 CIMAE 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 69 NIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS-LEKYLYSSNCILDIFQRLN- 126
+E ++ + H N+IKV+ N+ F LV+E HGS L+ + + +D RL+
Sbjct: 77 TLEIAILSRVEHANIIKVLDIFENQGFFQLVMEK--HGSGLDLFAF-----IDRHPRLDE 129
Query: 127 -----IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLL 175
I + SA+ YL +IH D+K N+++ ++ L DF A L
Sbjct: 130 PLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 62 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 115
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 116 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 171 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDF-SIAKLLTGEYQSMTQTQ 186
M+ ++ LH+ +H D+KP N+L+D N L+DF S KL+ E ++ +
Sbjct: 184 MVIAIDSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSV 235
Query: 187 TLATIGCIAPEYRR-----KGRESTNGDVYSFGIMLMETFTRKKP 226
+ T I+PE + KGR D +S G+ + E + P
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 63 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 116
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 117 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 172 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 68 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 121
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 122 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 176
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 177 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 123
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 179 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 63 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 116
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 117 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 172 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 123
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 179 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 60 QCGRAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLY 113
RA++ E +MK + H+N+I +++ + EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 114 SSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK 173
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 120 --QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 174 LLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
S T + T APE N D++S G ++ E
Sbjct: 175 TAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 107 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 160
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 216 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ +V+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---Q 120
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
S T + T APE N D++S G ++ E
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 60 AAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 115
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 116 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 170
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + DF +A+ E +AT APE D
Sbjct: 171 LKPSNLAVNEDCELKILDFGLARHTDDEMXG-----XVATRWYRAPEIMLNWMHYNQTVD 225
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 226 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E ++K + H+N+I +++ + EEF+ LV+E M +L + ++
Sbjct: 69 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 122
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ T + T APE + N D++S G ++ E
Sbjct: 178 TNF---MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 107 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 160
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
S T + T APE N D++S G ++ E K
Sbjct: 216 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 42 AQFLISSAMEVAVKVFNLQCGRAFKSF------NIECEMMKSIRHRNLIKVISTCSN--- 92
A F + + VAVK + R F+S E ++K ++H N+I ++ +
Sbjct: 40 AAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 95
Query: 93 -EEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
EEF + L ++ L + D Q L + + L+Y+H SA +IH D
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRD 150
Query: 151 LKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNG-D 209
LKP N+ ++++ + F +A+ E T +AT APE D
Sbjct: 151 LKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 210 VYSFGIMLMETFTRK---KPTDEIFNREMTLK 238
++S G ++ E T + TD I ++ L+
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E ++K + H+N+I +++ + EEF+ LV+E M +L + ++
Sbjct: 67 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 120
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+ +
Sbjct: 121 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
+ T + T APE N D++S G ++ E
Sbjct: 176 TNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 116
RA++ E +MK + H+N+I +++ + EEF+ +V+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME- 122
Query: 117 CILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLT 176
LD + ++ + +++LH SA +IH DLKP N+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 177 GEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
S T + T APE N D++S G ++ E
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +++K + H N+ K+ ++ + LV E G L + S ++ I+
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMTQTQT 187
V S + Y H +++H DLKP N+LL+ + + DF ++ S
Sbjct: 135 VLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKXKDK 188
Query: 188 LATIGCIAPEYRRKGRESTNGDVYSFGIML 217
+ T IAPE G DV+S G++L
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVIL 217
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
+V+EY+ SL++ S L + + + ++++ AL YLH S +++ DLKP N++
Sbjct: 161 IVMEYVGGQSLKR---SKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIM 214
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
L + + + +++++ + Y T G APE R G + D+Y+ G L
Sbjct: 215 LTEEQLKLIDLGAVSRINSFGY-------LYGTPGFQAPEIVRTG-PTVATDIYTVGRTL 266
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
V+EY+ G L ++ + F+ + + A L F S +I+ DLK NV+
Sbjct: 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFG 214
LD ++DF + K + +T T IAPE Y+ G+ D ++FG
Sbjct: 475 LDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV---DWWAFG 529
Query: 215 IMLMETFTRKKP-----TDEIF 231
++L E + P DE+F
Sbjct: 530 VLLYEMLAGQAPFEGEDEDELF 551
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E +M + H LI + ++ L+LE++ G L + + + + + +N M
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS--DFSIAKLLTGEYQSMTQTQTL 188
L+++H ++H D+KP N++ + + + DF +A L + T
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---EIVKVTT 211
Query: 189 ATIGCIAPEYRRKGRESTNGDVYSFGIM 216
AT APE + D+++ G++
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + + V+EY G L +L + R +
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 256
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SAL+YLH V++ DLK N++LD + ++DF + K G T T
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 36/171 (21%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
F +A+ S T + T APE N D++S G ++ E
Sbjct: 170 FGLARTAG---TSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + + V+EY G L +L + R +
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 259
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SAL+YLH V++ DLK N++LD + ++DF + K + + T+ T
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKT 311
Query: 191 IGCIAPEY 198
C PEY
Sbjct: 312 F-CGTPEY 318
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + + V+EY G L +L + R +
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 117
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SAL+YLH V++ DLK N++LD + ++DF + K G T T
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 40/237 (16%)
Query: 28 QILNFFICGVIIPVAQFLISSAMEVAVKVFNLQ-CGRAFKSFNIECEMMKSIRHRNLIKV 86
+IL + G ++ F VAVK + C A + + +S H N+I+
Sbjct: 21 KILGYGSSGTVVFQGSF---QGRPVAVKRMLIDFCDIALMEIKL---LTESDDHPNVIRY 74
Query: 87 ISTCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHF 140
+ + + F + LE + + +L+ + S N + + ++++ +AS + +LH
Sbjct: 75 YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 141 GYSAQVIHCDLKPINVLLD-------------DNMVAHLSDFSIAKLL-TGEYQSMTQ-T 185
S ++IH DLKP N+L+ +N+ +SDF + K L +G+ T
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 186 QTLATIGCIAPE-------YRRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNRE 234
T G APE + K R + + D++S G + ++ K P + ++RE
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + + V+EY G L +L + R +
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 116
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SAL+YLH V++ DLK N++LD + ++DF + K G T T
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 36/176 (20%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 63 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 106
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 107 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 163
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
F +A+ S T + T APE N D++S G ++ E K
Sbjct: 164 FGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 98 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVL 157
V+EY+ G L ++ + F+ + + A L F S +I+ DLK NV+
Sbjct: 98 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 153
Query: 158 LDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPE---YRRKGRESTNGDVYSFG 214
LD ++DF + K + +T T IAPE Y+ G+ D ++FG
Sbjct: 154 LDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV---DWWAFG 208
Query: 215 IMLMETFTRKKP-----TDEIFNREM 235
++L E + P DE+F M
Sbjct: 209 VLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 36/171 (21%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 70 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 113
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 114 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 170
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
F +A+ S T + T APE N D++S G ++ E
Sbjct: 171 FGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 36/171 (21%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
F +A+ S T + T APE N D++S G ++ E
Sbjct: 170 FGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 82 NLIKVISTCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
N+IK+I T + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 154
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVA-HLSDFSIAKLL--TGEYQSMTQTQTLATIGCIAP 196
S ++H D+KP NV++D L D+ +A+ EY ++ +
Sbjct: 155 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLV- 210
Query: 197 EYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+Y+ + D++S G ML R++P
Sbjct: 211 DYQMY---DYSLDMWSLGCMLASMIFRREP 237
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E ++++ RH L + + + V+EY G L +L + R +
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 118
Query: 131 VASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQTLAT 190
+ SAL+YLH V++ DLK N++LD + ++DF + K G T T
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 191 IGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+APE D + G+++ E + P
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 36/176 (20%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 74 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 117
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 118 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 174
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
F +A+ S T + T APE N D++S G ++ E K
Sbjct: 175 FGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 36/171 (21%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
F +A+ S T + T APE N D++S G ++ E
Sbjct: 170 FGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 46 ISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMP 104
+ + E AVK+ Q G + E E + + ++N++++I ++ LV E +
Sbjct: 35 LQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQ 94
Query: 105 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLD 159
GS+ ++ + + ++ DVA+AL++LH + + H DLKP N+L +
Sbjct: 95 GGSILAHIQKQK-HFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCE 145
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 82 NLIKVISTCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 139
N+IK+I T + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 149
Query: 140 FGYSAQVIHCDLKPINVLLDDNMVA-HLSDFSIAKLL--TGEYQSMTQTQTLATIGCIAP 196
S ++H D+KP NV++D L D+ +A+ EY ++ +
Sbjct: 150 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLV- 205
Query: 197 EYRRKGRESTNGDVYSFGIMLMETFTRKKP 226
+Y+ + D++S G ML R++P
Sbjct: 206 DYQMY---DYSLDMWSLGCMLASMIFRREP 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
V V F G + + E + ++H ++++++ T S++ +V E+M
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD------- 109
Query: 112 LYSSNCILDIFQRLNIMIDVASA---------LEYLHFGYSAQVIHCDLKPINVLL---D 159
++ +I +R + + A LE L + + +IH D+KP VLL +
Sbjct: 110 --GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE 167
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
++ L F +A L GE + + T +APE ++ DV+ G++L
Sbjct: 168 NSAPVKLGGFGVAIQL-GE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 52 VAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY 111
V V F G + + E + ++H ++++++ T S++ +V E+M
Sbjct: 59 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD------- 111
Query: 112 LYSSNCILDIFQRLNIMIDVASA---------LEYLHFGYSAQVIHCDLKPINVLL---D 159
++ +I +R + + A LE L + + +IH D+KP VLL +
Sbjct: 112 --GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE 169
Query: 160 DNMVAHLSDFSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIML 217
++ L F +A L GE + + T +APE ++ DV+ G++L
Sbjct: 170 NSAPVKLGGFGVAIQL-GE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 28 QILNFFICGVIIPVAQFLISSAMEVAVKVFNLQ-CGRAFKSFNIECEMMKSIRHRNLIKV 86
+IL + G ++ F VAVK + C A + E S H N+I+
Sbjct: 39 KILGYGSSGTVVFQGSF---QGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRY 92
Query: 87 ISTCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHF 140
+ + + F + LE + + +L+ + S N + + ++++ +AS + +LH
Sbjct: 93 YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 150
Query: 141 GYSAQVIHCDLKPINVLLD-------------DNMVAHLSDFSIAKLL-TGEYQ-SMTQT 185
S ++IH DLKP N+L+ +N+ +SDF + K L +G+
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 186 QTLATIGCIAPEY---RRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNRE 234
T G APE K R + + D++S G + ++ K P + ++RE
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 28 QILNFFICGVIIPVAQFLISSAMEVAVKVFNLQ-CGRAFKSFNIECEMMKSIRHRNLIKV 86
+IL + G ++ F VAVK + C A + E S H N+I+
Sbjct: 39 KILGYGSSGTVVFQGSF---QGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRY 92
Query: 87 ISTCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHF 140
+ + + F + LE + + +L+ + S N + + ++++ +AS + +LH
Sbjct: 93 YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 150
Query: 141 GYSAQVIHCDLKPINVLLD-------------DNMVAHLSDFSIAKLL-TGEYQ-SMTQT 185
S ++IH DLKP N+L+ +N+ +SDF + K L +G+
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 186 QTLATIGCIAPEY---RRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNRE 234
T G APE K R + + D++S G + ++ K P + ++RE
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 71 ECEMMKSIRHRNLIKVI----STCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 126
E ++K ++H N+I ++ S E+F + L G+ + + D +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 135
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL----LTG----- 177
++ + L+Y+H SA +IH DLKP NV ++++ + DF +A+ +TG
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
Query: 178 ---------EYQSMTQTQTLATIGCIAPE 197
+ QT + ++GCI E
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNE-----EFKA---LVLEYMPHGSLEKYLYSSNCILDIF 122
E ++++ ++H N++ +I C + KA LV ++ H L L + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLS 125
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL--LTGEYQ 180
+ +M + + L Y+H +++H D+K NVL+ + V L+DF +A+ L Q
Sbjct: 126 EIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 181 SMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTR 223
+ T+ PE R+ D++ G ++ E +TR
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 71 ECEMMKSIRHRNLIKVI----STCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 126
E ++K ++H N+I ++ S E+F + L G+ + + D +
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 127
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL----LTG----- 177
++ + L+Y+H SA +IH DLKP NV ++++ + DF +A+ +TG
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR 184
Query: 178 ---------EYQSMTQTQTLATIGCIAPE 197
+ QT + ++GCI E
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKA--------LVLEYMPHGSLEKYLYSSNCILDIF 122
E ++++ ++H N++ +I C + LV ++ H L L + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 125
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL--LTGEYQ 180
+ +M + + L Y+H +++H D+K NVL+ + V L+DF +A+ L Q
Sbjct: 126 EIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 181 SMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTR 223
+ T+ PE R+ D++ G ++ E +TR
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 127 IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDD---NMVAHLSDFSIAKLLTGEYQSMT 183
I + A++YLH S + H D+KP N+L N + L+DF AK T + S+
Sbjct: 166 IXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSL- 220
Query: 184 QTQTLATIGCIAPEYRRKGRESTNGDVYSFGIM 216
T T +APE + + D +S G++
Sbjct: 221 -TTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVI 252
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 36/176 (20%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
F +A+ T M + + + T APE N D++S G ++ E K
Sbjct: 170 FGLAR--TAGTSFMMEPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKA--------LVLEYMPHGSLEKYLYSSNCILDIF 122
E ++++ ++H N++ +I C + LV ++ H L L + +
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 124
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL--LTGEYQ 180
+ +M + + L Y+H +++H D+K NVL+ + V L+DF +A+ L Q
Sbjct: 125 EIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
Query: 181 SMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTR 223
+ T+ PE R+ D++ G ++ E +TR
Sbjct: 182 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 21 RSQTSDFQILNFFICGVIIPVAQFLISSAMEV-AVKVFN----LQCGRAFKSFNIECEMM 75
R Q DF+IL G VA + +V A+K+ N L+ G F E +++
Sbjct: 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV-SCFREERDVL 115
Query: 76 KSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 135
+ R + ++ +E + LV+EY G L L + + ++ A+
Sbjct: 116 VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAI 175
Query: 136 EYLH-FGYSAQVIHCDLKPINVLLDDNMVAHLSDFS 170
+ +H GY +H D+KP N+LLD L+DF
Sbjct: 176 DSVHRLGY----VHRDIKPDNILLDRCGHIRLADFG 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKA--------LVLEYMPHGSLEKYLYSSNCILDIF 122
E ++++ ++H N++ +I C + LV ++ H L L + +
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS 125
Query: 123 QRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKL--LTGEYQ 180
+ +M + + L Y+H +++H D+K NVL+ + V L+DF +A+ L Q
Sbjct: 126 EIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 181 SMTQTQTLATIGCIAPEYRRKGRESTNG-DVYSFGIMLMETFTR 223
+ T+ PE R+ D++ G ++ E +TR
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 42 AQFLISSAMEVAVKVF--NLQCGRAFKSFNIECEMMKSI--------RHRNLIKVISTCS 91
A ++ ++VA+KV N G + S ++ C + ++ H +I+++
Sbjct: 49 AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108
Query: 92 NEEFKALVLEY-MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCD 150
+E LVLE +P L Y+ + + R V +A+++ H S V+H D
Sbjct: 109 TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH---SRGVVHRD 164
Query: 151 LKPINVLLD-DNMVAHLSDFSIAKLLTGE-YQSMTQTQTLATIGCIAPEY-RRKGRESTN 207
+K N+L+D A L DF LL E Y T+ + PE+ R +
Sbjct: 165 IKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSP-----PEWISRHQYHALP 219
Query: 208 GDVYSFGIMLME 219
V+S GI+L +
Sbjct: 220 ATVWSLGILLYD 231
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 138 LHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAK--LLTGEYQSMTQTQTLATIGCIA 195
L F + +I+ DLK NV+LD ++DF + K ++ G +T + T IA
Sbjct: 133 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTREFCGTPDYIA 188
Query: 196 PE---YRRKGRESTNGDVYSFGIMLMETFTRKKPTD 228
PE Y+ G+ D +++G++L E + P D
Sbjct: 189 PEIIAYQPYGKSV---DWWAYGVLLYEMLAGQPPFD 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E + M +RH L+ + ++ ++ E+M G L + + + + + + M
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 131 VASALEYLHFGYSAQVIHCDLKPINV-----------LLDDNMVAHLSDFSIAKLLTG 177
V L ++H +H DLKP N+ L+D + AHL K+ TG
Sbjct: 264 VCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG 318
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 28 QILNFFICGVIIPVAQFLISSAMEVAVKVFNLQ-CGRAFKSFNIECEMMKSIRHRNLIKV 86
+IL + G ++ F VAVK + C A + + +S H N+I+
Sbjct: 21 KILGYGSSGTVVFQGSF---QGRPVAVKRMLIDFCDIALMEIKL---LTESDDHPNVIRY 74
Query: 87 ISTCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHF 140
+ + + F + LE + + +L+ + S N + + ++++ +AS + +LH
Sbjct: 75 YCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 141 GYSAQVIHCDLKPINVLLD-------------DNMVAHLSDFSIAKLL-TGEYQ-SMTQT 185
S ++IH DLKP N+L+ +N+ +SDF + K L +G+
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 186 QTLATIGCIAPE-------YRRKGRESTNGDVYSFGIMLMETFTR-KKPTDEIFNRE 234
T G APE + K R + + D++S G + ++ K P + ++RE
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 130
E + M +RH L+ + ++ ++ E+M G L + + + + + + M
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 131 VASALEYLHFGYSAQVIHCDLKPINV-----------LLDDNMVAHLSDFSIAKLLTG 177
V L ++H +H DLKP N+ L+D + AHL K+ TG
Sbjct: 158 VCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG 212
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 39/221 (17%)
Query: 71 ECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---- 126
E ++ RHRN++ + + + E ++ E++ LDIF+R+N
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISG-------------LDIFERINTSAF 97
Query: 127 ------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLS--DFSIAKLLT-G 177
I+ V E L F +S + H D++P N++ + + +F A+ L G
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157
Query: 178 EYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRKKP---------TD 228
+ + T APE + ST D++S G ++ + P +
Sbjct: 158 DNFRLLFTAP----EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE 213
Query: 229 EIFNREMTLKHWGNNWLPISTMEVVDANLLSQEDIHFVAKE 269
I N E T + I M+ VD L+ + A E
Sbjct: 214 NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASE 254
>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|D Chain D, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|G Chain G, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|H Chain H, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|K Chain K, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|L Chain L, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|O Chain O, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|P Chain P, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|S Chain S, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|T Chain T, Paf-Ah Holoenzyme: Lis1ALFA2
Length = 410
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 33/57 (57%)
Query: 38 IIPVAQFLISSAMEVAVKVFNLQCGRAFKSFNIECEMMKSIRHRNLIKVISTCSNEE 94
I+P ++S++ + +K++ +Q G K+F E ++ +R +I++CSN++
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 36/176 (20%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLMETFTRK 224
F +A+ T M + + + T APE N D++S G ++ E K
Sbjct: 170 FGLAR--TAGTSFMMEPEVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 25/115 (21%)
Query: 129 IDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGE----YQSMTQ 184
I++ AL YL + H DLKP N+LLDD S ++ ++ G+ Y++ +
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDDPYFEK-SLITVRRVTDGKKIQIYRTKST 199
Query: 185 TQTLATIGCI-----------------APEYRRKGRESTNGDVYSFGIMLMETFT 222
L GC APE + D++SFG +L E +T
Sbjct: 200 GIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
M+ ++ LH+ +H D+KP NVLLD N L+DF + L + ++ +
Sbjct: 184 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 236
Query: 188 LATIGCIAPEYRRK-----GRESTNGDVYSFGIMLMETFTRKKP 226
+ T I+PE + G+ D +S G+ + E + P
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 128 MIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSDFSIAKLLTGEYQSMTQTQT 187
M+ ++ LH+ +H D+KP NVLLD N L+DF + L + ++ +
Sbjct: 200 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 252
Query: 188 LATIGCIAPEYRRK-----GRESTNGDVYSFGIMLMETFTRKKP 226
+ T I+PE + G+ D +S G+ + E + P
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 36/171 (21%)
Query: 63 RAFKSFNIECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSLEKY--------LYS 114
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 71 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 114
Query: 115 SNCILDIFQRLN------IMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMVAHLSD 168
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 115 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 171
Query: 169 FSIAKLLTGEYQSMTQTQTLATIGCIAPEYRRKGRESTNGDVYSFGIMLME 219
F +A+ S + T APE N D++S G ++ E
Sbjct: 172 FGLARTAG---TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 219
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASAL 135
+H ++++ S + ++ + EY GSL + + I+ F+ ++++ V L
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 136 EYLHFGYSAQVIHCDLKPINVLL 158
Y+H S ++H D+KP N+ +
Sbjct: 129 RYIH---SMSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASAL 135
+H ++++ S + ++ + EY GSL + + I+ F+ ++++ V L
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 136 EYLHFGYSAQVIHCDLKPINVLL 158
Y+H S ++H D+KP N+ +
Sbjct: 125 RYIH---SMSLVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASAL 135
+H ++++ S + ++ + EY GSL + + I+ F+ ++++ V L
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 136 EYLHFGYSAQVIHCDLKPINVLL 158
Y+H S ++H D+KP N+ +
Sbjct: 127 RYIH---SMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 79 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASAL 135
+H ++++ S + ++ + EY GSL + + I+ F+ ++++ V L
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 136 EYLHFGYSAQVIHCDLKPINVLL 158
Y+H S ++H D+KP N+ +
Sbjct: 127 RYIH---SMSLVHMDIKPSNIFI 146
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 49 AMEVAVKVFN--LQCGRAFKSFNIECEMMKSIRHRNLIKVISTC---SNEEFKALVLEYM 103
A++ ++VF + C R + E ++ + H +++KV+ E+F L +
Sbjct: 82 AIKKILRVFEDLIDCKRILR----EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137
Query: 104 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAQVIHCDLKPINVLLDDNMV 163
S K L+ + L ++ ++ ++Y+H SA ++H DLKP N L++ +
Sbjct: 138 IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCS 194
Query: 164 AHLSDFSIAKLLTGEYQSMTQTQ 186
+ DF +A+ T +Y +Q
Sbjct: 195 VKVCDFGLAR--TVDYPENGNSQ 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,989,657
Number of Sequences: 62578
Number of extensions: 301551
Number of successful extensions: 3197
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 369
Number of HSP's that attempted gapping in prelim test: 1311
Number of HSP's gapped (non-prelim): 1071
length of query: 313
length of database: 14,973,337
effective HSP length: 99
effective length of query: 214
effective length of database: 8,778,115
effective search space: 1878516610
effective search space used: 1878516610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)