Query 047141
Match_columns 215
No_of_seqs 298 out of 1681
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 13:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.5E-51 5.2E-56 341.5 20.4 194 21-215 1-197 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 3E-33 1E-37 257.0 13.6 146 64-214 296-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 4.3E-32 1.5E-36 250.9 15.8 146 64-214 331-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 1.7E-32 5.8E-37 251.9 12.9 147 63-214 295-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.1E-31 3.8E-36 246.9 13.3 147 63-214 294-442 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 2.8E-31 9.4E-36 245.9 12.3 153 57-214 359-514 (531)
7 2cav_A Protein (canavalin); vi 100.0 3.1E-30 1.1E-34 236.6 14.1 156 52-213 243-411 (445)
8 1uij_A Beta subunit of beta co 100.0 4.8E-30 1.6E-34 233.8 14.8 157 52-214 211-383 (416)
9 3c3v_A Arachin ARAH3 isoform; 100.0 1.2E-29 4.1E-34 235.4 16.0 147 63-214 344-492 (510)
10 1fxz_A Glycinin G1; proglycini 100.0 1.8E-29 6E-34 233.2 16.8 147 63-214 310-458 (476)
11 2ea7_A 7S globulin-1; beta bar 100.0 2.1E-29 7E-34 230.6 14.1 158 50-213 226-398 (434)
12 2d5f_A Glycinin A3B4 subunit; 100.0 1.3E-29 4.4E-34 235.0 12.6 146 63-214 339-484 (493)
13 3s7i_A Allergen ARA H 1, clone 100.0 1.3E-28 4.5E-33 224.1 11.8 154 54-213 226-407 (418)
14 1dgw_A Canavalin; duplicated s 99.9 4.8E-27 1.6E-31 191.1 14.8 149 55-213 3-166 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 2.1E-26 7E-31 208.5 14.1 137 69-214 223-371 (397)
16 2e9q_A 11S globulin subunit be 99.9 1.1E-24 3.7E-29 200.4 14.1 139 70-214 43-235 (459)
17 2vqa_A SLL1358 protein, MNCA; 99.9 3E-24 1E-28 190.6 16.0 158 48-214 194-351 (361)
18 2ea7_A 7S globulin-1; beta bar 99.9 2.5E-24 8.6E-29 196.9 13.2 151 54-212 21-185 (434)
19 2cav_A Protein (canavalin); vi 99.9 8.1E-24 2.8E-28 194.1 16.6 153 53-213 46-211 (445)
20 1uij_A Beta subunit of beta co 99.9 3.4E-24 1.2E-28 195.2 12.6 137 69-212 24-173 (416)
21 1fxz_A Glycinin G1; proglycini 99.9 4.8E-24 1.6E-28 197.0 13.1 138 70-214 28-227 (476)
22 2phl_A Phaseolin; plant SEED s 99.9 6.1E-24 2.1E-28 192.3 12.5 151 54-212 12-181 (397)
23 3qac_A 11S globulin SEED stora 99.9 9.2E-24 3.1E-28 194.0 13.3 139 69-213 29-236 (465)
24 3s7i_A Allergen ARA H 1, clone 99.9 2.9E-23 9.9E-28 188.9 15.2 135 69-212 19-168 (418)
25 3ksc_A LEGA class, prolegumin; 99.9 2.2E-23 7.6E-28 192.8 14.0 137 70-212 26-214 (496)
26 2d5f_A Glycinin A3B4 subunit; 99.9 1.2E-22 4.1E-27 188.2 13.6 140 70-214 25-230 (493)
27 3kgl_A Cruciferin; 11S SEED gl 99.9 1.8E-22 6.2E-27 185.4 12.8 140 69-213 22-244 (466)
28 3c3v_A Arachin ARAH3 isoform; 99.9 6.1E-22 2.1E-26 183.8 13.4 139 70-213 28-268 (510)
29 3fz3_A Prunin; TREE NUT allerg 99.9 1.9E-21 6.6E-26 180.1 12.1 140 69-213 27-296 (531)
30 2vqa_A SLL1358 protein, MNCA; 99.9 1.6E-20 5.6E-25 166.5 16.7 148 56-213 21-171 (361)
31 1j58_A YVRK protein; cupin, de 99.8 4.8E-19 1.7E-23 158.5 16.8 153 52-214 222-374 (385)
32 1j58_A YVRK protein; cupin, de 99.8 3E-19 1E-23 159.9 11.0 147 56-213 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 6.6E-20 2.3E-24 130.6 4.6 73 58-131 4-76 (79)
34 3h8u_A Uncharacterized conserv 99.6 2.2E-14 7.6E-19 108.2 10.4 84 90-179 38-121 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.5 4.1E-14 1.4E-18 120.0 9.4 117 51-171 7-137 (239)
36 3l2h_A Putative sugar phosphat 99.5 1.4E-13 4.7E-18 108.8 11.7 86 90-182 45-132 (162)
37 2fqp_A Hypothetical protein BP 99.5 1.4E-13 4.9E-18 100.0 8.6 76 90-171 17-93 (97)
38 1v70_A Probable antibiotics sy 99.5 3.1E-13 1.1E-17 97.4 10.2 78 89-173 26-103 (105)
39 1lr5_A Auxin binding protein 1 99.5 3.6E-13 1.2E-17 106.6 11.4 85 90-175 40-127 (163)
40 2oa2_A BH2720 protein; 1017534 99.4 1.1E-12 3.7E-17 102.4 12.4 84 90-174 42-125 (148)
41 3i7d_A Sugar phosphate isomera 99.4 6.1E-13 2.1E-17 106.0 11.1 86 89-181 41-129 (163)
42 3ibm_A Cupin 2, conserved barr 99.4 2.9E-12 9.8E-17 102.6 14.6 117 49-174 12-132 (167)
43 1x82_A Glucose-6-phosphate iso 99.4 3.4E-12 1.2E-16 104.2 14.4 84 89-174 65-156 (190)
44 3es1_A Cupin 2, conserved barr 99.4 7.2E-13 2.5E-17 107.1 9.8 81 89-177 77-157 (172)
45 3ht1_A REMF protein; cupin fol 99.4 1.7E-12 5.8E-17 99.7 11.2 86 89-180 37-122 (145)
46 2gu9_A Tetracenomycin polyketi 99.4 1.6E-12 5.5E-17 95.3 10.6 78 89-173 19-98 (113)
47 3lag_A Uncharacterized protein 99.4 2E-13 6.7E-18 100.4 4.8 77 90-170 16-92 (98)
48 1o4t_A Putative oxalate decarb 99.4 3.1E-12 1.1E-16 98.2 10.3 78 87-171 53-130 (133)
49 3kgz_A Cupin 2 conserved barre 99.4 2.9E-12 9.9E-17 101.7 10.2 79 89-175 42-120 (156)
50 4e2g_A Cupin 2 conserved barre 99.4 2.1E-12 7.1E-17 97.3 9.0 76 90-174 40-115 (126)
51 3fjs_A Uncharacterized protein 99.4 1.9E-12 6.5E-17 97.1 8.6 73 90-170 35-107 (114)
52 2bnm_A Epoxidase; oxidoreducta 99.4 5.7E-12 1.9E-16 102.2 11.8 84 84-171 110-197 (198)
53 2b8m_A Hypothetical protein MJ 99.4 1E-11 3.5E-16 92.5 12.1 74 90-171 26-100 (117)
54 3jzv_A Uncharacterized protein 99.3 3.9E-12 1.3E-16 102.0 9.9 78 89-174 51-128 (166)
55 2f4p_A Hypothetical protein TM 99.3 2.3E-11 7.8E-16 95.1 14.0 99 88-201 45-144 (147)
56 2ozi_A Hypothetical protein RP 99.3 1.7E-12 5.8E-17 95.5 5.9 78 90-171 16-93 (98)
57 2pfw_A Cupin 2, conserved barr 99.3 8.6E-12 2.9E-16 92.5 9.7 76 90-175 33-108 (116)
58 4i4a_A Similar to unknown prot 99.3 1.7E-11 5.9E-16 92.5 11.0 76 89-172 32-107 (128)
59 1vj2_A Novel manganese-contain 99.3 7.8E-12 2.7E-16 94.9 9.1 77 88-172 45-121 (126)
60 2o8q_A Hypothetical protein; c 99.3 1.1E-11 3.7E-16 94.5 9.5 78 91-175 43-120 (134)
61 3cew_A Uncharacterized cupin p 99.3 7.1E-12 2.4E-16 94.6 8.3 80 88-174 23-103 (125)
62 1yhf_A Hypothetical protein SP 99.3 3.3E-11 1.1E-15 89.1 10.5 73 90-172 39-111 (115)
63 1y9q_A Transcriptional regulat 99.3 2E-11 6.8E-16 98.8 9.7 79 86-173 99-179 (192)
64 2vpv_A Protein MIF2, MIF2P; nu 99.3 2.1E-11 7.1E-16 98.0 9.4 74 91-171 88-162 (166)
65 1rc6_A Hypothetical protein YL 99.3 1.9E-11 6.4E-16 104.0 9.6 78 88-172 176-254 (261)
66 3h7j_A Bacilysin biosynthesis 99.2 3.2E-11 1.1E-15 101.6 9.4 77 91-175 145-222 (243)
67 2q30_A Uncharacterized protein 99.2 7.6E-11 2.6E-15 86.1 9.4 75 90-172 32-107 (110)
68 2ozj_A Cupin 2, conserved barr 99.2 1.3E-10 4.4E-15 86.1 10.3 72 91-172 38-109 (114)
69 1sef_A Conserved hypothetical 99.2 2.1E-10 7.1E-15 98.4 12.1 77 88-172 179-257 (274)
70 1y3t_A Hypothetical protein YX 99.2 1.2E-10 4.1E-15 101.4 10.2 77 90-174 45-121 (337)
71 2d40_A Z3393, putative gentisa 99.1 1.1E-10 3.9E-15 103.9 8.6 76 90-172 99-174 (354)
72 3lwc_A Uncharacterized protein 99.1 2.2E-10 7.7E-15 86.8 8.7 73 90-172 39-111 (119)
73 2d40_A Z3393, putative gentisa 99.1 3.8E-10 1.3E-14 100.5 11.2 89 71-171 249-338 (354)
74 1juh_A Quercetin 2,3-dioxygena 99.1 5.7E-10 1.9E-14 99.0 12.3 80 91-174 48-130 (350)
75 3h7j_A Bacilysin biosynthesis 99.1 2E-10 6.7E-15 96.8 8.8 73 92-172 35-108 (243)
76 3d82_A Cupin 2, conserved barr 99.1 2.8E-10 9.6E-15 81.9 8.2 70 87-169 29-98 (102)
77 2i45_A Hypothetical protein; n 99.1 2E-10 7E-15 84.2 7.5 69 93-170 30-98 (107)
78 1sfn_A Conserved hypothetical 99.1 7.8E-10 2.7E-14 93.5 12.0 77 88-172 162-239 (246)
79 1y3t_A Hypothetical protein YX 99.1 8.1E-10 2.8E-14 96.1 12.3 74 93-174 219-293 (337)
80 1sq4_A GLXB, glyoxylate-induce 99.1 2.8E-10 9.4E-15 98.1 9.2 77 88-172 65-143 (278)
81 2opk_A Hypothetical protein; p 99.1 8.1E-10 2.8E-14 82.4 9.9 74 90-172 30-109 (112)
82 1rc6_A Hypothetical protein YL 99.1 3.9E-10 1.3E-14 95.8 8.8 77 89-172 57-134 (261)
83 2pyt_A Ethanolamine utilizatio 99.0 4.3E-10 1.5E-14 86.9 7.6 71 90-172 56-126 (133)
84 4b29_A Dimethylsulfoniopropion 99.0 7E-10 2.4E-14 92.3 9.1 77 88-172 129-205 (217)
85 3rns_A Cupin 2 conserved barre 99.0 8.4E-10 2.9E-14 92.0 9.6 73 90-171 152-224 (227)
86 4e2q_A Ureidoglycine aminohydr 99.0 1.3E-09 4.3E-14 93.6 10.6 106 48-172 37-142 (266)
87 1sef_A Conserved hypothetical 99.0 7.7E-10 2.6E-14 94.8 8.8 77 89-172 60-137 (274)
88 4h7l_A Uncharacterized protein 99.0 1.4E-09 4.7E-14 86.5 9.5 72 90-174 46-119 (157)
89 3rns_A Cupin 2 conserved barre 99.0 2E-09 6.8E-14 89.8 10.2 74 90-173 36-109 (227)
90 3bu7_A Gentisate 1,2-dioxygena 99.0 2.2E-09 7.5E-14 96.9 10.9 78 88-172 120-198 (394)
91 1sq4_A GLXB, glyoxylate-induce 99.0 3.8E-09 1.3E-13 91.0 11.7 86 83-176 183-270 (278)
92 3nw4_A Gentisate 1,2-dioxygena 99.0 1.2E-09 4.1E-14 97.7 8.7 78 89-173 101-178 (368)
93 1vr3_A Acireductone dioxygenas 98.9 1.1E-08 3.7E-13 83.8 12.8 84 92-179 75-168 (191)
94 4axo_A EUTQ, ethanolamine util 98.9 2.2E-09 7.4E-14 84.9 8.3 73 90-174 65-137 (151)
95 3bu7_A Gentisate 1,2-dioxygena 98.9 8.3E-09 2.9E-13 93.1 13.1 91 72-171 276-367 (394)
96 1dgw_Y Canavalin; duplicated s 98.9 7.7E-09 2.6E-13 75.3 10.3 72 137-213 6-81 (93)
97 4e2q_A Ureidoglycine aminohydr 98.9 6E-09 2.1E-13 89.4 11.3 76 88-171 183-259 (266)
98 1o5u_A Novel thermotoga mariti 98.8 8.8E-09 3E-13 75.9 6.9 64 95-167 35-98 (101)
99 3ebr_A Uncharacterized RMLC-li 98.7 3.6E-08 1.2E-12 78.4 8.5 87 71-172 27-115 (159)
100 3bcw_A Uncharacterized protein 98.7 1.9E-08 6.3E-13 76.7 6.5 68 90-165 48-115 (123)
101 1zrr_A E-2/E-2' protein; nicke 98.7 7.9E-09 2.7E-13 83.8 4.6 70 104-178 93-162 (179)
102 2q1z_B Anti-sigma factor CHRR, 98.7 3.1E-08 1.1E-12 81.1 8.2 70 91-172 125-194 (195)
103 1sfn_A Conserved hypothetical 98.7 4.1E-08 1.4E-12 82.8 8.9 71 90-172 49-119 (246)
104 1yfu_A 3-hydroxyanthranilate-3 98.7 1.4E-07 4.7E-12 75.8 10.7 69 88-161 33-101 (174)
105 2o1q_A Putative acetyl/propion 98.6 2.8E-08 9.5E-13 77.6 5.0 91 71-174 29-120 (145)
106 3eqe_A Putative cystein deoxyg 98.6 6.1E-07 2.1E-11 72.2 12.8 86 90-176 68-156 (171)
107 3cjx_A Protein of unknown func 98.6 8.3E-08 2.8E-12 76.8 7.4 74 90-172 42-117 (165)
108 1juh_A Quercetin 2,3-dioxygena 98.6 2.4E-07 8.1E-12 82.1 10.6 80 85-172 243-325 (350)
109 2y0o_A Probable D-lyxose ketol 98.6 3.2E-07 1.1E-11 74.0 9.9 78 91-174 53-154 (175)
110 3st7_A Capsular polysaccharide 98.5 8.9E-07 3E-11 77.5 11.4 84 93-179 274-365 (369)
111 1zvf_A 3-hydroxyanthranilate 3 98.5 1.2E-06 4.2E-11 70.2 10.7 62 98-160 41-103 (176)
112 2gm6_A Cysteine dioxygenase ty 98.4 2.7E-06 9.2E-11 70.3 12.5 83 90-173 78-167 (208)
113 3d0j_A Uncharacterized protein 98.4 5.8E-07 2E-11 69.7 7.7 78 92-171 26-108 (140)
114 3nw4_A Gentisate 1,2-dioxygena 98.4 1.7E-06 5.9E-11 77.3 11.4 87 72-170 260-348 (368)
115 2arc_A ARAC, arabinose operon 98.4 4.3E-06 1.5E-10 64.3 11.2 71 93-171 15-91 (164)
116 2qnk_A 3-hydroxyanthranilate 3 98.3 4E-06 1.4E-10 71.9 10.3 73 99-177 39-111 (286)
117 3o14_A Anti-ecfsigma factor, C 98.3 4.1E-06 1.4E-10 69.9 10.1 84 71-172 27-110 (223)
118 3bal_A Acetylacetone-cleaving 98.3 1E-06 3.5E-11 69.6 5.8 90 71-172 31-120 (153)
119 3eln_A Cysteine dioxygenase ty 98.2 3.4E-05 1.2E-09 63.3 13.5 87 91-177 70-163 (200)
120 3myx_A Uncharacterized protein 97.9 7.8E-05 2.7E-09 62.8 10.6 81 90-181 46-130 (238)
121 3uss_A Putative uncharacterize 97.9 0.00027 9.2E-09 58.5 13.5 84 91-175 73-163 (211)
122 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.9 0.00018 6.3E-09 55.8 11.6 95 72-172 17-113 (141)
123 3ejk_A DTDP sugar isomerase; Y 97.9 0.00023 7.8E-09 57.2 12.1 75 98-172 60-141 (174)
124 3es4_A Uncharacterized protein 97.8 0.00012 4.1E-09 55.1 8.8 64 91-162 42-105 (116)
125 3myx_A Uncharacterized protein 97.5 0.00044 1.5E-08 58.2 9.4 63 90-160 166-228 (238)
126 3gbg_A TCP pilus virulence reg 97.3 0.00077 2.6E-08 56.4 8.6 73 91-169 7-83 (276)
127 1yud_A Hypothetical protein SO 97.1 0.014 4.8E-07 46.5 13.7 131 69-211 26-164 (170)
128 2vec_A YHAK, pirin-like protei 97.1 0.004 1.4E-07 52.8 10.5 73 93-171 66-141 (256)
129 3o14_A Anti-ecfsigma factor, C 97.0 0.0035 1.2E-07 52.0 9.6 78 71-169 133-210 (223)
130 3kmh_A D-lyxose isomerase; cup 97.0 0.0042 1.4E-07 52.0 9.9 80 91-170 106-206 (246)
131 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.0 0.0039 1.3E-07 50.4 9.6 73 99-172 56-136 (185)
132 2ixk_A DTDP-4-dehydrorhamnose 96.9 0.0053 1.8E-07 49.6 9.3 73 99-172 57-137 (184)
133 1dzr_A DTDP-4-dehydrorhamnose 96.8 0.009 3.1E-07 48.1 9.9 71 99-170 55-134 (183)
134 1tq5_A Protein YHHW; bicupin, 96.8 0.011 3.7E-07 49.6 10.6 73 93-171 43-118 (242)
135 1vrb_A Putative asparaginyl hy 96.8 0.013 4.4E-07 51.5 11.4 74 96-170 145-251 (342)
136 4gjz_A Lysine-specific demethy 96.7 0.0048 1.6E-07 50.0 7.5 68 94-162 126-226 (235)
137 3ryk_A DTDP-4-dehydrorhamnose 96.6 0.017 5.7E-07 47.5 10.2 71 99-170 78-157 (205)
138 1wlt_A 176AA long hypothetical 96.5 0.03 1E-06 45.6 11.3 71 99-170 73-152 (196)
139 1oi6_A PCZA361.16; epimerase, 96.5 0.035 1.2E-06 45.5 11.4 73 99-172 55-136 (205)
140 3bb6_A Uncharacterized protein 96.5 0.028 9.7E-07 42.6 10.0 71 99-171 22-99 (127)
141 2c0z_A NOVW; isomerase, epimer 96.4 0.034 1.2E-06 45.9 11.0 71 99-170 63-142 (216)
142 3d8c_A Hypoxia-inducible facto 96.2 0.019 6.4E-07 50.5 9.0 75 96-171 187-296 (349)
143 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.2 0.028 9.7E-07 45.8 9.3 72 99-172 68-143 (197)
144 1upi_A DTDP-4-dehydrorhamnose 96.2 0.06 2E-06 44.7 11.4 71 99-170 74-153 (225)
145 4hn1_A Putative 3-epimerase in 95.9 0.056 1.9E-06 44.1 9.9 73 99-172 52-133 (201)
146 2qdr_A Uncharacterized protein 95.5 0.26 9E-06 41.8 12.6 86 69-172 75-161 (303)
147 3al5_A HTYW5, JMJC domain-cont 95.5 0.042 1.4E-06 48.0 8.2 72 96-170 171-271 (338)
148 1e5r_A Proline oxidase; oxidor 95.4 0.019 6.5E-07 49.5 5.3 73 91-167 91-170 (290)
149 2xdv_A MYC-induced nuclear ant 95.4 0.15 5.1E-06 46.3 11.5 65 96-161 143-223 (442)
150 4diq_A Lysine-specific demethy 95.1 0.19 6.4E-06 46.3 11.5 74 96-170 168-261 (489)
151 2p17_A Pirin-like protein; GK1 95.1 0.15 5E-06 43.5 10.1 83 93-182 42-133 (277)
152 3k2o_A Bifunctional arginine d 95.0 0.093 3.2E-06 46.0 8.8 68 96-163 176-282 (336)
153 2qjv_A Uncharacterized IOLB-li 95.0 0.17 5.7E-06 43.1 9.9 82 90-174 152-248 (270)
154 1j1l_A Pirin; beta sandwich, c 94.9 0.18 6.1E-06 43.3 10.2 103 72-182 21-135 (290)
155 2yu1_A JMJC domain-containing 94.9 0.048 1.6E-06 49.8 6.6 77 99-175 204-304 (451)
156 3kv5_D JMJC domain-containing 94.8 0.057 2E-06 49.7 7.0 64 99-162 274-361 (488)
157 3kv4_A PHD finger protein 8; e 94.6 0.12 4.1E-06 47.1 8.5 65 99-163 239-327 (447)
158 1eyb_A Homogentisate 1,2-dioxy 94.4 0.15 5.1E-06 46.5 8.7 56 105-169 171-226 (471)
159 3k3o_A PHF8, PHD finger protei 94.3 0.095 3.3E-06 46.6 7.0 64 99-162 155-242 (371)
160 1xru_A 4-deoxy-L-threo-5-hexos 94.0 0.4 1.4E-05 41.0 10.1 82 90-175 179-266 (282)
161 2qnk_A 3-hydroxyanthranilate 3 93.9 0.16 5.3E-06 43.5 7.3 61 98-170 214-275 (286)
162 3rcq_A Aspartyl/asparaginyl be 93.6 0.44 1.5E-05 38.7 9.2 88 81-176 91-184 (197)
163 3kv9_A JMJC domain-containing 93.6 0.15 5.1E-06 45.7 7.0 63 99-161 183-269 (397)
164 2oyz_A UPF0345 protein VPA0057 93.5 0.52 1.8E-05 33.8 8.4 66 96-171 28-93 (94)
165 3pua_A GRC5, PHD finger protei 93.2 0.2 6.8E-06 44.9 7.1 64 99-162 182-269 (392)
166 3hqx_A UPF0345 protein aciad03 92.4 0.68 2.3E-05 34.1 7.8 67 97-171 43-109 (111)
167 1ywk_A 4-deoxy-L-threo-5-hexos 92.3 0.47 1.6E-05 40.7 8.0 82 90-175 179-266 (289)
168 3pur_A Lysine-specific demethy 92.2 0.22 7.4E-06 46.2 6.1 63 99-161 304-390 (528)
169 2rg4_A Uncharacterized protein 90.8 0.81 2.8E-05 37.3 7.6 68 93-160 105-192 (216)
170 3eo6_A Protein of unknown func 89.5 0.88 3E-05 33.3 6.0 55 97-159 42-96 (106)
171 1pmi_A PMI, phosphomannose iso 88.9 2.4 8.3E-05 38.3 9.9 75 91-171 357-437 (440)
172 3dl3_A Tellurite resistance pr 88.5 2.9 0.0001 31.1 8.4 47 113-159 39-86 (119)
173 1qwr_A Mannose-6-phosphate iso 87.1 2 7E-05 37.0 7.9 56 91-156 251-306 (319)
174 2wfp_A Mannose-6-phosphate iso 86.6 0.88 3E-05 40.6 5.4 57 90-156 323-379 (394)
175 1tq5_A Protein YHHW; bicupin, 84.5 6.3 0.00021 32.6 9.4 69 89-170 158-226 (242)
176 2ypd_A Probable JMJC domain-co 84.3 1.1 3.8E-05 39.9 4.8 41 135-175 291-331 (392)
177 2pqq_A Putative transcriptiona 84.0 2.5 8.5E-05 30.4 6.1 52 94-147 29-80 (149)
178 1zx5_A Mannosephosphate isomer 84.0 5 0.00017 34.2 8.8 56 91-158 230-286 (300)
179 3mdp_A Cyclic nucleotide-bindi 82.4 2.5 8.7E-05 30.1 5.5 54 93-148 29-85 (142)
180 3dn7_A Cyclic nucleotide bindi 81.8 4.6 0.00016 30.7 7.1 117 94-214 31-191 (194)
181 1j1l_A Pirin; beta sandwich, c 81.1 12 0.00042 31.7 10.1 77 88-171 166-242 (290)
182 2oz6_A Virulence factor regula 81.1 4.9 0.00017 30.7 7.1 53 94-148 14-66 (207)
183 3fx3_A Cyclic nucleotide-bindi 80.1 5.4 0.00018 31.3 7.2 52 94-147 35-86 (237)
184 4ev0_A Transcription regulator 79.9 4.8 0.00016 31.0 6.7 53 94-148 23-75 (216)
185 3ryp_A Catabolite gene activat 79.4 6.2 0.00021 30.2 7.2 52 95-148 21-72 (210)
186 1qwr_A Mannose-6-phosphate iso 79.2 3.4 0.00011 35.6 6.0 46 112-157 117-178 (319)
187 2p17_A Pirin-like protein; GK1 79.0 15 0.00051 30.9 9.9 72 88-170 164-240 (277)
188 2z69_A DNR protein; beta barre 78.8 2.3 7.9E-05 30.8 4.3 53 93-147 35-87 (154)
189 3d0s_A Transcriptional regulat 78.7 6.2 0.00021 30.7 7.1 52 95-148 31-82 (227)
190 3iwz_A CAP-like, catabolite ac 78.7 5.7 0.0002 30.9 6.9 53 94-148 35-87 (230)
191 3e97_A Transcriptional regulat 78.6 5.8 0.0002 31.0 6.9 54 93-148 29-82 (231)
192 3gyd_A CNMP-BD protein, cyclic 78.6 6.1 0.00021 30.3 6.9 53 93-147 62-114 (187)
193 1zx5_A Mannosephosphate isomer 78.5 1.5 5.2E-05 37.5 3.5 46 112-157 117-178 (300)
194 1zyb_A Transcription regulator 77.5 5.1 0.00017 31.6 6.3 53 93-147 43-95 (232)
195 2vec_A YHAK, pirin-like protei 77.1 11 0.00036 31.5 8.3 71 89-168 180-250 (256)
196 3b02_A Transcriptional regulat 77.0 5.5 0.00019 30.4 6.2 50 97-148 3-52 (195)
197 3idb_B CAMP-dependent protein 76.6 8.2 0.00028 28.4 6.9 51 94-147 62-112 (161)
198 2fmy_A COOA, carbon monoxide o 76.6 8.6 0.00029 29.8 7.3 114 94-214 28-190 (220)
199 2gau_A Transcriptional regulat 76.2 4.9 0.00017 31.5 5.8 53 93-147 33-85 (232)
200 1o5l_A Transcriptional regulat 75.5 5.6 0.00019 30.9 5.9 53 93-147 22-74 (213)
201 3kcc_A Catabolite gene activat 75.4 8.3 0.00028 31.1 7.1 53 94-148 70-122 (260)
202 3la7_A Global nitrogen regulat 75.3 7.7 0.00026 30.8 6.8 54 93-148 43-96 (243)
203 3dv8_A Transcriptional regulat 73.9 8.4 0.00029 29.6 6.6 52 94-147 27-78 (220)
204 1ft9_A Carbon monoxide oxidati 73.1 19 0.00064 27.9 8.5 70 94-170 24-93 (222)
205 2zcw_A TTHA1359, transcription 73.1 7.1 0.00024 29.9 5.9 71 96-170 8-84 (202)
206 3m3i_A Putative uncharacterize 73.1 37 0.0013 27.8 13.7 150 47-211 15-209 (225)
207 3e6c_C CPRK, cyclic nucleotide 72.9 8.5 0.00029 30.6 6.5 53 94-148 33-85 (250)
208 2qcs_B CAMP-dependent protein 72.9 11 0.00039 30.4 7.4 54 93-147 180-233 (291)
209 2wfp_A Mannose-6-phosphate iso 70.8 3.3 0.00011 36.8 3.8 23 136-158 239-261 (394)
210 2xxz_A Lysine-specific demethy 67.3 9.1 0.00031 33.3 5.8 36 135-170 277-312 (332)
211 2bgc_A PRFA; bacterial infecti 66.7 14 0.00049 29.0 6.6 71 96-170 21-98 (238)
212 4f8a_A Potassium voltage-gated 66.2 17 0.00059 26.1 6.6 49 94-149 51-99 (160)
213 2qjv_A Uncharacterized IOLB-li 66.2 59 0.002 27.3 11.2 81 75-169 16-107 (270)
214 2ptm_A Hyperpolarization-activ 66.0 13 0.00043 28.4 6.0 49 93-147 94-142 (198)
215 3bpz_A Potassium/sodium hyperp 64.0 12 0.00042 28.6 5.6 48 93-147 95-142 (202)
216 3pna_A CAMP-dependent protein 61.6 24 0.00082 25.5 6.6 48 93-147 61-108 (154)
217 4ava_A Lysine acetyltransferas 61.2 17 0.00057 30.2 6.3 51 94-147 37-87 (333)
218 3loi_A Putative uncharacterize 60.4 59 0.002 25.4 15.4 130 69-212 24-168 (172)
219 1znp_A Hypothetical protein AT 60.2 56 0.0019 25.1 12.4 90 69-161 19-115 (154)
220 1pmi_A PMI, phosphomannose iso 60.0 7.1 0.00024 35.2 3.8 23 137-159 266-288 (440)
221 1xsq_A Ureidoglycolate hydrola 59.9 20 0.00068 28.0 6.0 67 104-170 69-139 (168)
222 3ocp_A PRKG1 protein; serine/t 59.5 28 0.00095 24.5 6.5 47 94-147 47-93 (139)
223 2bdr_A Ureidoglycolate hydrola 58.2 27 0.00092 27.4 6.5 67 104-170 71-141 (175)
224 3shr_A CGMP-dependent protein 57.5 21 0.0007 29.0 6.1 52 94-147 181-233 (299)
225 1ywk_A 4-deoxy-L-threo-5-hexos 57.3 40 0.0014 28.7 7.9 66 96-168 62-130 (289)
226 3avr_A Lysine-specific demethy 57.1 16 0.00056 33.7 5.8 35 135-169 336-370 (531)
227 3dkw_A DNR protein; CRP-FNR, H 57.1 4.8 0.00016 31.3 2.0 53 94-148 33-85 (227)
228 4ask_A Lysine-specific demethy 55.3 12 0.00042 34.4 4.6 85 80-168 228-344 (510)
229 3ukn_A Novel protein similar t 52.9 22 0.00075 27.4 5.3 49 93-148 98-146 (212)
230 3tnp_B CAMP-dependent protein 51.7 37 0.0013 29.6 7.1 52 93-147 168-219 (416)
231 1o7f_A CAMP-dependent RAP1 gua 48.1 34 0.0012 29.8 6.3 56 93-149 65-121 (469)
232 2d93_A RAP guanine nucleotide 47.9 22 0.00075 25.0 4.2 47 94-147 40-87 (134)
233 1s4c_A Protein HI0227; double- 47.6 52 0.0018 24.8 6.5 55 104-158 60-133 (155)
234 3of1_A CAMP-dependent protein 43.7 28 0.00096 26.9 4.6 47 94-147 31-77 (246)
235 1vp6_A CNBD, cyclic-nucleotide 43.6 29 0.00099 24.2 4.3 45 94-147 35-79 (138)
236 2qcs_B CAMP-dependent protein 43.4 51 0.0018 26.3 6.3 47 94-147 63-109 (291)
237 4din_B CAMP-dependent protein 42.7 35 0.0012 29.3 5.4 51 96-147 274-324 (381)
238 3shr_A CGMP-dependent protein 39.6 53 0.0018 26.5 5.9 48 93-147 62-109 (299)
239 3of1_A CAMP-dependent protein 36.7 52 0.0018 25.3 5.2 48 94-147 149-196 (246)
240 1wgp_A Probable cyclic nucleot 33.3 11 0.00036 26.7 0.4 48 97-147 33-82 (137)
241 3tnp_B CAMP-dependent protein 32.0 71 0.0024 27.8 5.7 54 93-147 290-348 (416)
242 1yll_A PA5104, conserved hypot 30.2 84 0.0029 25.0 5.4 35 112-152 140-174 (200)
243 3g7d_A PHPD; non heme Fe(II) d 29.3 2.9E+02 0.01 24.2 12.0 43 113-158 355-397 (443)
244 1pcq_O Groes protein; chaperon 25.6 1.4E+02 0.0047 21.0 5.2 48 100-152 22-70 (97)
245 4f7z_A RAP guanine nucleotide 25.3 1.4E+02 0.0047 29.1 6.9 90 46-147 27-119 (999)
246 2opw_A Phyhd1 protein; double- 24.8 92 0.0031 25.3 4.9 29 135-163 226-255 (291)
247 1xe7_A YML079WP, hypothetical 23.6 2.8E+02 0.0096 22.1 13.1 146 50-212 27-198 (203)
248 4din_B CAMP-dependent protein 23.3 72 0.0024 27.3 4.0 48 93-147 153-200 (381)
249 1o7f_A CAMP-dependent RAP1 gua 22.9 1.6E+02 0.0056 25.3 6.4 46 96-147 364-409 (469)
250 1tc3_C Protein (TC3 transposas 22.9 87 0.003 17.3 3.3 23 192-214 22-44 (51)
251 1iyc_A Scarabaecin; antifungal 22.6 15 0.00051 20.7 -0.3 10 39-48 23-32 (36)
252 2dkz_A Hypothetical protein LO 22.2 43 0.0015 23.2 1.9 29 182-213 46-74 (84)
253 1xru_A 4-deoxy-L-threo-5-hexos 21.7 1.2E+02 0.0041 25.6 4.9 50 112-168 78-130 (282)
254 3dxt_A JMJC domain-containing 21.6 1.6E+02 0.0054 25.7 5.8 36 135-170 260-295 (354)
255 2a1x_A Phytanoyl-COA dioxygena 21.4 1.1E+02 0.0039 25.0 4.8 29 135-163 214-243 (308)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.5e-51 Score=341.46 Aligned_cols=194 Identities=49% Similarity=0.849 Sum_probs=182.7
Q ss_pred cCCCCCcceeeeCCCCC-cccCCcccCCCCCCccchhhhcc-ccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEE
Q 047141 21 FEPSPLQDFCVADPSSS-ARVNGLACMDPKLAQADHFVFSG-LHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDY 98 (215)
Q Consensus 21 ~d~~~~~dfcv~~~~~~-~~~~g~~ck~~~~~~~~dF~f~~-~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l 98 (215)
+||||||||||||++++ +++|||+|| |+.++++||+|++ +.+++++.|..|+.++.++..++|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999998 999999999 9999999999999 99999988899999999999999999999999999999
Q ss_pred cCCcccCCccCCCCcEEEEEEEcEEEEEEEecCC-CCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCc
Q 047141 99 APWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP-DNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPG 177 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg 177 (215)
.||+..++|||++++|++||++|++++++.+.++ +++++.+.|++||+++||+|..|+++|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 9999999999998899999999999999975310 145568999999999999999999999999999999999999999
Q ss_pred eeeecchhccCCCCCCHHHHHHHcCCCHHHHHHhhhcC
Q 047141 178 VITIANTVFGSNPAIADDLLAKAFQVDKSVVGQLQTKF 215 (215)
Q Consensus 178 ~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~~ 215 (215)
.+.++.++|+.+|++++|+|+++|+++++++++||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999876
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=3e-33 Score=256.99 Aligned_cols=146 Identities=16% Similarity=0.265 Sum_probs=136.1
Q ss_pred CCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecC
Q 047141 64 AGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQK 143 (215)
Q Consensus 64 ~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~ 143 (215)
..++.++.|++++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|+++++++++++ ++++.++|++
T Consensus 296 ~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-~~~f~~~l~~ 374 (466)
T 3kgl_A 296 NADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNG-DRVFDGQVSQ 374 (466)
T ss_dssp GEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEET
T ss_pred cCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCC-cEEEEeEecC
Confidence 334446789999999999999999999999999999999999999999999999999999999999863 6788999999
Q ss_pred CcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 144 GDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 144 GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
||+++||+|++|++ |.|++++.+++++++++|+.+.++ .++|++ +|++||+++|+++++++++||++
T Consensus 375 GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 375 GQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp TCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHHhc
Confidence 99999999999998 788999999999999999999998 688998 99999999999999999999874
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.98 E-value=4.3e-32 Score=250.93 Aligned_cols=146 Identities=18% Similarity=0.310 Sum_probs=135.1
Q ss_pred CCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecC
Q 047141 64 AGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQK 143 (215)
Q Consensus 64 ~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~ 143 (215)
..++.++.|++++.+++.+||+|+++||++++++|.||++++|||||+|+||+||++|+++++++++++ ++++.++|++
T Consensus 331 ~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-~~~f~~~l~~ 409 (496)
T 3ksc_A 331 SPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG-NTVFDGELEA 409 (496)
T ss_dssp CCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEET
T ss_pred cCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC-cEEEEEEecC
Confidence 345557789999999999999999999999999999999999999999999999999999999999863 6788899999
Q ss_pred CcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 144 GDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 144 GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
||+++||+|++|++.|. ++++.+++++++++|+...++ .++|+. +|++||+++|+++.+++++||++
T Consensus 410 GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~Lk~~ 478 (496)
T 3ksc_A 410 GRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQLKSN 478 (496)
T ss_dssp TCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999998775 788999999999999999997 788987 99999999999999999999873
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.98 E-value=1.7e-32 Score=251.90 Aligned_cols=147 Identities=18% Similarity=0.248 Sum_probs=137.0
Q ss_pred CCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEec
Q 047141 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQ 142 (215)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~ 142 (215)
..+++.++.|++++.+++.+||+|+++||+++++++.||++++|||||+|+|++||++|+++++++++++ ++++.++|+
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g-~~~f~~~l~ 373 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG-QSVFDEELS 373 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC-cEEEEEEec
Confidence 4456667889999999999999999999999999999999999999999999999999999999999863 688899999
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
+||+++||+|++|++. .|++++.+++++++++|+.+.++ .++|+. +|++||+++|++|++++++||++
T Consensus 374 ~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 374 RGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp TTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 9999999999999985 57889999999999999999998 789987 99999999999999999999874
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=1.1e-31 Score=246.89 Aligned_cols=147 Identities=15% Similarity=0.239 Sum_probs=137.3
Q ss_pred CCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEec
Q 047141 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQ 142 (215)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~ 142 (215)
..+++.++.|++++.+++.+||+|++++++++++++.||++.+||||++|+|++||++|+++++++++++ ++++.++|+
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g-~~~~~~~l~ 372 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG-QSVFDGEVR 372 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-CEEEeeEEe
Confidence 4445557889999999999999999999999999999999999999999999999999999999998763 687888999
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
+||+++||+|.+|++.| |++++.+++++++++|+...++ .++|++ +|++||+++|+++++++++|+++
T Consensus 373 ~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~ 442 (459)
T 2e9q_A 373 EGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYG 442 (459)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999999 7899999999999999999998 889998 99999999999999999999874
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=2.8e-31 Score=245.88 Aligned_cols=153 Identities=21% Similarity=0.318 Sum_probs=135.8
Q ss_pred hhcccc-CCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCc
Q 047141 57 VFSGLH-VAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNR 135 (215)
Q Consensus 57 ~f~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k 135 (215)
.|+..+ ...++.|+.|++++.+++.+||+|++++|++++++|.||++++|||||+|+|++||++|++++++++++ +++
T Consensus 359 ~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~-G~~ 437 (531)
T 3fz3_A 359 KENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNEN-GDA 437 (531)
T ss_dssp EEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT-SCE
T ss_pred eeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCC-CcE
Confidence 455432 445666889999999999999999999999999999999999999999999999999999999999976 267
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 136 LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 136 ~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
+++++|++||+++||+|++|++. .+++.+.++++.++++|+...++ .++|++ +|++||+++|++|++++++||+
T Consensus 438 v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk~ 513 (531)
T 3fz3_A 438 ILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLKY 513 (531)
T ss_dssp EEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHHH
T ss_pred EEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHh
Confidence 78999999999999999999875 56777777755566999999998 889998 9999999999999999999987
Q ss_pred c
Q 047141 214 K 214 (215)
Q Consensus 214 ~ 214 (215)
+
T Consensus 514 ~ 514 (531)
T 3fz3_A 514 N 514 (531)
T ss_dssp S
T ss_pred c
Confidence 4
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.97 E-value=3.1e-30 Score=236.64 Aligned_cols=156 Identities=20% Similarity=0.178 Sum_probs=136.3
Q ss_pred ccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC
Q 047141 52 QADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 131 (215)
Q Consensus 52 ~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 131 (215)
....+.|+.+.+++.++ ..|++++.+++.+||+|+++|++++++++.||++.+|||||+|+|++||++|++++++++++
T Consensus 243 ~~~~~~~~l~~~~p~~~-~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~ 321 (445)
T 2cav_A 243 SSQDKPFNLRSRDPIYS-NNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 321 (445)
T ss_dssp ---CCCEETTSSCCSEE-SSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-
T ss_pred CCcccceeccccCCCcc-CCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCC
Confidence 34567888887877764 66779999999999999999999999999999999999999999999999999999999875
Q ss_pred C-------CCc--eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeec---chhccCCCCCCHHHHH
Q 047141 132 P-------DNR--LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGL-SSQNPGVITIA---NTVFGSNPAIADDLLA 198 (215)
Q Consensus 132 ~-------~~k--~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~-~s~~pg~~~~~---~~~f~~~p~~p~~vla 198 (215)
+ +++ +++++|++||+++||+|.+|++.|. +++.++++. ++++|+.+.++ .++|++ +|++||+
T Consensus 322 ~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla 396 (445)
T 2cav_A 322 QQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSD 396 (445)
T ss_dssp ----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHHH
T ss_pred CcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHHH
Confidence 2 124 6899999999999999999999998 467777765 56699999998 789998 9999999
Q ss_pred HHcCCCHHHHHHhhh
Q 047141 199 KAFQVDKSVVGQLQT 213 (215)
Q Consensus 199 ~af~~~~~~v~~lk~ 213 (215)
++|++|.+++++||+
T Consensus 397 ~af~v~~~~v~~l~~ 411 (445)
T 2cav_A 397 LTFPGSGEEVEELLE 411 (445)
T ss_dssp HHSSSCHHHHHHHHH
T ss_pred HHHCcCHHHHHHHHh
Confidence 999999999999986
No 8
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=4.8e-30 Score=233.75 Aligned_cols=157 Identities=22% Similarity=0.210 Sum_probs=139.2
Q ss_pred ccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC
Q 047141 52 QADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 131 (215)
Q Consensus 52 ~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 131 (215)
....+.|+.+.+++.+.+. +|+++.+++.+||+|++++++++++++.||++.+||||++++|++||++|++++++++++
T Consensus 211 ~~~~~~~~l~~~~p~~~~~-~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~ 289 (416)
T 1uij_A 211 SSEDEPFNLRSRNPIYSNN-FGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIK 289 (416)
T ss_dssp GCSSSCEETTSSCCSEECS-SEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC
T ss_pred CCcccceeccccCCCccCC-CceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCC
Confidence 3557888888777766544 557999999999999999999999999999999999999999999999999999999885
Q ss_pred CC----------C--ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcC-CCCceeeec---chhccCCCCCCHH
Q 047141 132 PD----------N--RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSS-QNPGVITIA---NTVFGSNPAIADD 195 (215)
Q Consensus 132 ~~----------~--k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s-~~pg~~~~~---~~~f~~~p~~p~~ 195 (215)
+. + +++..+|++||+++||+|.+|+++|. +++.+++++++ ++|+.+.++ .++|+. +|++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~~ 364 (416)
T 1uij_A 290 EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IERQ 364 (416)
T ss_dssp ------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCHH
T ss_pred CccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCHH
Confidence 20 1 46777999999999999999999998 68999998854 599999997 789998 9999
Q ss_pred HHHHHcCCCHHHHHHhhhc
Q 047141 196 LLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 196 vla~af~~~~~~v~~lk~~ 214 (215)
||+++|+++++++++|++.
T Consensus 365 vla~af~~~~~~v~~l~~~ 383 (416)
T 1uij_A 365 VQELAFPGSAQDVERLLKK 383 (416)
T ss_dssp HHHHHSSSCHHHHHHHTTS
T ss_pred HHHHHHCcCHHHHHHHHhc
Confidence 9999999999999999863
No 9
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=1.2e-29 Score=235.44 Aligned_cols=147 Identities=20% Similarity=0.318 Sum_probs=136.4
Q ss_pred CCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEec
Q 047141 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQ 142 (215)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~ 142 (215)
..+++.++.|++++.+++.+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G-~~~~~~~l~ 422 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG-NRVYDEELQ 422 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC-CEEEeEEEc
Confidence 4455667899999999999999999999999999999999999999999999999999999999998752 577778899
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
+||+++||+|++|++.| +++++.+++++++++|+...++ .++|++ +|++||+++|+++++++++|+++
T Consensus 423 ~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~ 492 (510)
T 3c3v_A 423 EGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNN 492 (510)
T ss_dssp TTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhh
Confidence 99999999999999999 8888999998888899999998 889998 99999999999999999999975
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=1.8e-29 Score=233.23 Aligned_cols=147 Identities=20% Similarity=0.328 Sum_probs=136.0
Q ss_pred CCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEec
Q 047141 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQ 142 (215)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~ 142 (215)
..+++.++.|++++.+++.+||+|+++++++++++++||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G-~~~~~~~l~ 388 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG-ERVFDGELQ 388 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC-CEEeeeEEc
Confidence 3445557889999999999999999999999999999999999999999999999999999999998752 576778899
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIA--NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
+||+++||+|.+|++.| |++.+.+++++++++|+...++ .++|++ +|++||+++|++|++++++|+++
T Consensus 389 ~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~ 458 (476)
T 1fxz_A 389 EGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNN 458 (476)
T ss_dssp TTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhh
Confidence 99999999999999999 8889999999888999999998 889998 99999999999999999999875
No 11
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=2.1e-29 Score=230.61 Aligned_cols=158 Identities=19% Similarity=0.181 Sum_probs=139.3
Q ss_pred CCccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEe
Q 047141 50 LAQADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 129 (215)
Q Consensus 50 ~~~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 129 (215)
......+.|+.+.+++.+. ..|++++.+++.+||+|+++|++++++++.||++.+||||++++|++||++|++++++++
T Consensus 226 g~~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~ 304 (434)
T 2ea7_A 226 ELSSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVG 304 (434)
T ss_dssp CTTCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE
T ss_pred CCCCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEe
Confidence 3445577888887777764 567789999999999999999999999999999999999999999999999999999998
Q ss_pred cCC---------CC--ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc-CCCCceeeec---chhccCCCCCCH
Q 047141 130 SNP---------DN--RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLS-SQNPGVITIA---NTVFGSNPAIAD 194 (215)
Q Consensus 130 ~~~---------~~--k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~-s~~pg~~~~~---~~~f~~~p~~p~ 194 (215)
+++ ++ +++..+|++||+++||+|.+|++.|. +++.++++++ +++|+.+.++ .++|++ +|+
T Consensus 305 ~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~ 379 (434)
T 2ea7_A 305 LSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPT 379 (434)
T ss_dssp EEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCH
T ss_pred cCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCH
Confidence 741 02 26777999999999999999999998 5788888774 5689999998 789998 999
Q ss_pred HHHHHHcCCCHHHHHHhhh
Q 047141 195 DLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 195 ~vla~af~~~~~~v~~lk~ 213 (215)
+||+++|+++.+++++|++
T Consensus 380 ~vla~af~v~~~~v~~l~~ 398 (434)
T 2ea7_A 380 EVLEVSFPASGKKVEKLIK 398 (434)
T ss_dssp HHHHHHSSSCHHHHHHHHT
T ss_pred HHHHHHHCcCHHHHHHHHh
Confidence 9999999999999999986
No 12
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=1.3e-29 Score=234.97 Aligned_cols=146 Identities=21% Similarity=0.360 Sum_probs=135.8
Q ss_pred CCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEec
Q 047141 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQ 142 (215)
Q Consensus 63 ~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~ 142 (215)
.++++.++.|++++.+++.+||+|+++++++++++++||++.+||||++++|++||++|++++++++++ +++++..+|+
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~-g~~~~~~~l~ 417 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQ-GNAVFDGELR 417 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT-SCEEEEEEEE
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCC-CCEEEeEEEc
Confidence 566767889999999999999999999999999999999999999999999999999999999999875 2566778899
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeecchhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIANTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
+||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++++++++|+++
T Consensus 418 ~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~ 484 (493)
T 2d5f_A 418 RGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQ 484 (493)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999998 568999999999999999999 889998 99999999999999999999875
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.95 E-value=1.3e-28 Score=224.11 Aligned_cols=154 Identities=19% Similarity=0.199 Sum_probs=134.7
Q ss_pred chhhhccccCCCCccCCCCceEEEeeeccC-CCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCC
Q 047141 54 DHFVFSGLHVAGNTSNPLGSRVTPVTVAQI-PGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP 132 (215)
Q Consensus 54 ~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~-P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 132 (215)
..+.|+.+.+++.++|. +++++.+++.+| |+|+++||+++++++.||++.+|||||+|+|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~-~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNN-FGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEET-TEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCC-CCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 36888988888877544 556899999999 9999999999999999999999999999999999999999999998641
Q ss_pred C-----------------------CceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeecc---hh
Q 047141 133 D-----------------------NRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGL-SSQNPGVITIAN---TV 185 (215)
Q Consensus 133 ~-----------------------~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~-~s~~pg~~~~~~---~~ 185 (215)
. .+++...|++||+++||+|++||+.|.+ ++.++++. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 0 0567899999999999999999998864 47777654 566999999983 78
Q ss_pred ccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 186 FGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 186 f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
|++ +|+++|++||++|++++++||+
T Consensus 383 ~~~---~~~evla~af~v~~~~v~~L~~ 407 (418)
T 3s7i_A 383 IDQ---IEKQAKDLAFPGSGEQVEKLIK 407 (418)
T ss_dssp HHH---SCHHHHHHHSSSCHHHHHHHHH
T ss_pred hhc---CCHHHHHHHhCCCHHHHHHHHh
Confidence 997 9999999999999999999986
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.95 E-value=4.8e-27 Score=191.05 Aligned_cols=149 Identities=13% Similarity=0.217 Sum_probs=125.0
Q ss_pred hhhhccccCCCCccCCCCceEEEeee-----ccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEe
Q 047141 55 HFVFSGLHVAGNTSNPLGSRVTPVTV-----AQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 129 (215)
Q Consensus 55 dF~f~~~~~~~~~~~~~g~~v~~~~~-----~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 129 (215)
.|+|+.......+ ...||+++.++. ..+|+++ ++++.+++++||+..+|| |++++|++||++|++++++++
T Consensus 3 p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 3 PYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp TTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred Cceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 4667755444333 467889999887 6788887 479999999999999999 988999999999999999987
Q ss_pred cCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCC-cEEEEEEE-cCCCCceee---ec-----chhccCCCCCCHHHHHH
Q 047141 130 SNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHG-NAFSISGL-SSQNPGVIT---IA-----NTVFGSNPAIADDLLAK 199 (215)
Q Consensus 130 ~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~-~a~~i~~~-~s~~pg~~~---~~-----~~~f~~~p~~p~~vla~ 199 (215)
++ + ...+.|++||+++||+|.+|+++|.|++ +++++++. ++++||.+. ++ .++|++ +|++||++
T Consensus 79 ~~--~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~ 152 (178)
T 1dgw_A 79 PD--G-RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEA 152 (178)
T ss_dssp TT--E-EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHH
T ss_pred CC--C-cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHH
Confidence 64 2 2478999999999999999999999986 78888875 567888443 32 578998 99999999
Q ss_pred HcCCCHHHHHHhhh
Q 047141 200 AFQVDKSVVGQLQT 213 (215)
Q Consensus 200 af~~~~~~v~~lk~ 213 (215)
+|+++++++++||.
T Consensus 153 af~v~~~~~~~l~~ 166 (178)
T 1dgw_A 153 SYDSPYDEIEQTLL 166 (178)
T ss_dssp HHTSCHHHHHHHTT
T ss_pred HHCcCHHHHHHHhc
Confidence 99999999999984
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=2.1e-26 Score=208.47 Aligned_cols=137 Identities=24% Similarity=0.214 Sum_probs=121.1
Q ss_pred CCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEec------CCCCceEEEEec
Q 047141 69 NPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTS------NPDNRLISKVLQ 142 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~------~~~~k~~~~~L~ 142 (215)
+..+|+++.+++.+ ++++++++++.||++.+||||++++|++||++|+++++++++ + ++++++.+|+
T Consensus 223 ~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~-g~~~~~~~l~ 295 (397)
T 2phl_A 223 GNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETL-EYESYRAELS 295 (397)
T ss_dssp EETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCS-CEEEEEEEEE
T ss_pred cCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCC-CceEEEEEec
Confidence 34566699999988 899999999999999999999999999999999999999987 3 2688999999
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEEEc-CCCCceeeec---chhccCCC-CCC-HHHHHHHcCCCHHHHHHhhhc
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISGLS-SQNPGVITIA---NTVFGSNP-AIA-DDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~-s~~pg~~~~~---~~~f~~~p-~~p-~~vla~af~~~~~~v~~lk~~ 214 (215)
+||+++||+|.+|+++|.+ ++.++++.+ +++|+.+.++ .++|++.| +|+ ++||+++|+++++++++|+++
T Consensus 296 ~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~ 371 (397)
T 2phl_A 296 KDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINK 371 (397)
T ss_dssp TTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTT
T ss_pred CCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhc
Confidence 9999999999999999986 788887664 5699999988 88999822 233 999999999999999999874
No 16
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.92 E-value=1.1e-24 Score=200.43 Aligned_cols=139 Identities=22% Similarity=0.332 Sum_probs=117.9
Q ss_pred CCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCce-------------
Q 047141 70 PLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRL------------- 136 (215)
Q Consensus 70 ~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~------------- 136 (215)
..+|.+.. ...+.|+|+++|++++|++++||++.+||||+ ++|++||++|+++++++.++. .+.
T Consensus 43 se~G~~~~-~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~-~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 43 AEAGFTEV-WDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGC-AETYQTDLRRSQSAGS 119 (459)
T ss_dssp ETTEEEEE-CCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTC-CCCEEECCC-------
T ss_pred cCCcEEEe-cCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCC-cchhccchhhcccccc
Confidence 45665555 55667999999999999999999999999997 899999999999999986631 111
Q ss_pred -------EEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC--------Cceeeec-------------------
Q 047141 137 -------ISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQN--------PGVITIA------------------- 182 (215)
Q Consensus 137 -------~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~--------pg~~~~~------------------- 182 (215)
..+.|++||+++||+|++||++|.|++++++++++++.| +..+.++
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 257999999999999999999999999999999998554 3344443
Q ss_pred -------chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 183 -------NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 183 -------~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
.++|++ +++++|++||++|.++++||+++
T Consensus 200 ~~~~~~~~nif~g---f~~evLa~aF~v~~~~v~kL~~~ 235 (459)
T 2e9q_A 200 GSSGEKSGNIFSG---FADEFLEEAFQIDGGLVRKLKGE 235 (459)
T ss_dssp -----CCCCTTTT---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred ccccccccchhhc---CCHHHHHhhcCCCHHHHHhhhhc
Confidence 479998 99999999999999999999865
No 17
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=3e-24 Score=190.56 Aligned_cols=158 Identities=20% Similarity=0.225 Sum_probs=139.3
Q ss_pred CCCCccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEE
Q 047141 48 PKLAQADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGF 127 (215)
Q Consensus 48 ~~~~~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~ 127 (215)
+...+.++|+|+.+..++. .+..|+.++.+...++|++++ +++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPL-VSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCS-EEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCc-ccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 4566788999988776663 356789999999999999885 5778889999999999999988999999999999999
Q ss_pred EecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeecchhccCCCCCCHHHHHHHcCCCHHH
Q 047141 128 VTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIANTVFGSNPAIADDLLAKAFQVDKSV 207 (215)
Q Consensus 128 ~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af~~~~~~ 207 (215)
++++ ++...+.|++||++++|+|..|++.|.|++++++++++++++++...+++ ++++ +|++||+++|++++++
T Consensus 271 ~~~~--g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~~---~~~~vl~~~f~~~~~~ 344 (361)
T 2vqa_A 271 FASE--GKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLAS---NPSSVLGNTFQISPEL 344 (361)
T ss_dssp ECST--TCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHHT---SCHHHHHHHHTCCHHH
T ss_pred EcCC--CcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhhh---CCHHHHHHHHCcCHHH
Confidence 7754 45457899999999999999999999999999999999999999988886 5776 9999999999999999
Q ss_pred HHHhhhc
Q 047141 208 VGQLQTK 214 (215)
Q Consensus 208 v~~lk~~ 214 (215)
+++||++
T Consensus 345 ~~~l~~~ 351 (361)
T 2vqa_A 345 TKKLPVQ 351 (361)
T ss_dssp HTTSCCS
T ss_pred HHhhhcc
Confidence 9999875
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.91 E-value=2.5e-24 Score=196.95 Aligned_cols=151 Identities=17% Similarity=0.252 Sum_probs=124.7
Q ss_pred chhhhcccc-CCCCccCCCCceEEEeee--ccCCCCCccc-EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEe
Q 047141 54 DHFVFSGLH-VAGNTSNPLGSRVTPVTV--AQIPGLNTLG-IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 129 (215)
Q Consensus 54 ~dF~f~~~~-~~~~~~~~~g~~v~~~~~--~~~P~l~~lg-vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 129 (215)
..|+|+... ..... ...+|.+..++. .+.|.|++++ +++++++++||+..+|| |++++|++||++|++++++++
T Consensus 21 ~p~~f~~~~~~~~~~-~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~ 98 (434)
T 2ea7_A 21 NPFYFNSDRWFRTLY-RNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVN 98 (434)
T ss_dssp CTTEECTTTSEEEEE-EETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred CCeEEeccccccceE-EcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEe
Confidence 456666332 11222 356788888743 5568899998 99999999999999999 778999999999999999987
Q ss_pred cCCCCceEEEEecCCcEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCcee---eecc-----hhccCCCCCCHHHHHH
Q 047141 130 SNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG-HGNAFSISGLS-SQNPGVI---TIAN-----TVFGSNPAIADDLLAK 199 (215)
Q Consensus 130 ~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g-~~~a~~i~~~~-s~~pg~~---~~~~-----~~f~~~p~~p~~vla~ 199 (215)
+ ++.+.+.|++||+++||+|..||++|.| ++++++++++. +++||.+ .++. ++|++ +|++||++
T Consensus 99 ~---~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~ 172 (434)
T 2ea7_A 99 P---DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILEA 172 (434)
T ss_dssp S---SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHHH
T ss_pred C---CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHHH
Confidence 5 3456899999999999999999999998 78999999874 6777643 3443 48887 99999999
Q ss_pred HcCCCHHHHHHhh
Q 047141 200 AFQVDKSVVGQLQ 212 (215)
Q Consensus 200 af~~~~~~v~~lk 212 (215)
+|++|++++++|+
T Consensus 173 af~v~~~~v~~l~ 185 (434)
T 2ea7_A 173 SFDSDFKEINRVL 185 (434)
T ss_dssp HHTSCHHHHHHHH
T ss_pred HhCCCHHHHHhhh
Confidence 9999999999998
No 19
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.91 E-value=8.1e-24 Score=194.10 Aligned_cols=153 Identities=14% Similarity=0.212 Sum_probs=125.6
Q ss_pred cchhhhccccCCCCccCCCCceEEEeee--ccCCCCCccc-EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEe
Q 047141 53 ADHFVFSGLHVAGNTSNPLGSRVTPVTV--AQIPGLNTLG-IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 129 (215)
Q Consensus 53 ~~dF~f~~~~~~~~~~~~~g~~v~~~~~--~~~P~l~~lg-vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 129 (215)
.+.|+|+........ ...++.+..++. .+.|.++++| +++++++++||+..+|| |++++|++||++|++++++++
T Consensus 46 ~~p~vf~~~~~~~~i-~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 123 (445)
T 2cav_A 46 NNPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 123 (445)
T ss_dssp CCTTEECGGGEEEEE-EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCCeEEchhhcCceE-EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEe
Confidence 345666543322122 235777888754 4557899988 99999999999999999 667999999999999999997
Q ss_pred cCCCCceEEEEecCCcEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCcee---eec-----chhccCCCCCCHHHHHH
Q 047141 130 SNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG-HGNAFSISGLS-SQNPGVI---TIA-----NTVFGSNPAIADDLLAK 199 (215)
Q Consensus 130 ~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g-~~~a~~i~~~~-s~~pg~~---~~~-----~~~f~~~p~~p~~vla~ 199 (215)
++ ++ +++.+++||++++|+|..||++|.| +++++++++++ +++||.+ .++ .++|++ +|++||++
T Consensus 124 ~~--~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~ 197 (445)
T 2cav_A 124 PD--GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEA 197 (445)
T ss_dssp TT--EE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHH
T ss_pred CC--CC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHH
Confidence 64 44 6899999999999999999999999 79999999987 6678743 344 378998 99999999
Q ss_pred HcCCCHHHHHHhhh
Q 047141 200 AFQVDKSVVGQLQT 213 (215)
Q Consensus 200 af~~~~~~v~~lk~ 213 (215)
+|++|++++++|++
T Consensus 198 af~v~~~~v~~l~~ 211 (445)
T 2cav_A 198 SYDSPYDEIEQTLL 211 (445)
T ss_dssp HHTSCHHHHHHHTT
T ss_pred HhCCCHHHHHhhhc
Confidence 99999999999984
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.91 E-value=3.4e-24 Score=195.16 Aligned_cols=137 Identities=20% Similarity=0.293 Sum_probs=118.0
Q ss_pred CCCCceEEEeee--ccCCCCCccc-EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCc
Q 047141 69 NPLGSRVTPVTV--AQIPGLNTLG-IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGD 145 (215)
Q Consensus 69 ~~~g~~v~~~~~--~~~P~l~~lg-vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GD 145 (215)
...||.++.+.. .+.+.|++++ +++++++++||+..+|| |++++|++||++|+++++++++ ++..++.+++||
T Consensus 24 ~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~---~~~~~~~l~~GD 99 (416)
T 1uij_A 24 ENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN---DDRDSYNLHPGD 99 (416)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS---SCEEEEEECTTE
T ss_pred EcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC---CCCeEEEecCCC
Confidence 456788888643 3458889988 99999999999999999 7779999999999999999876 344589999999
Q ss_pred EEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCcee---eecc-----hhccCCCCCCHHHHHHHcCCCHHHHHHhh
Q 047141 146 VFVFPVGLIHFQRNVG-HGNAFSISGLS-SQNPGVI---TIAN-----TVFGSNPAIADDLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 146 v~v~P~G~~H~~~N~g-~~~a~~i~~~~-s~~pg~~---~~~~-----~~f~~~p~~p~~vla~af~~~~~~v~~lk 212 (215)
+++||+|..||++|.| ++++++++++. +++||.+ .++. ++|++ +|++||+++|++|++++++|+
T Consensus 100 v~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~~~~v~~l~ 173 (416)
T 1uij_A 100 AQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILETSFHSEFEEINRVL 173 (416)
T ss_dssp EEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHH
T ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHHHHhCcCHHHHHhhh
Confidence 9999999999999995 99999999985 6777643 3442 47887 999999999999999999998
No 21
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.91 E-value=4.8e-24 Score=196.98 Aligned_cols=138 Identities=17% Similarity=0.263 Sum_probs=117.9
Q ss_pred CCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCc--------------
Q 047141 70 PLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNR-------------- 135 (215)
Q Consensus 70 ~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k-------------- 135 (215)
..+|.+..++ ...|+|+++|++++|++++||++.+||||+ ++|++||++|+++++++.++ ++
T Consensus 28 se~G~~e~~~-~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg--~~et~~~~~~~~~~~~ 103 (476)
T 1fxz_A 28 SEGGLIETWN-PNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPG--CPSTFEEPQQPQQRGQ 103 (476)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTT--CCCC------------
T ss_pred cCCceEEeeC-CCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCC--Ccchhhcccccccccc
Confidence 4566666654 555999999999999999999999999998 89999999999999999763 21
Q ss_pred --------eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC--------ceeeec-----------------
Q 047141 136 --------LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNP--------GVITIA----------------- 182 (215)
Q Consensus 136 --------~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~p--------g~~~~~----------------- 182 (215)
...+.|++||+++||+|++||++|.|++++++++++++.++ ..+.++
T Consensus 104 ~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~ 183 (476)
T 1fxz_A 104 SSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGH 183 (476)
T ss_dssp ------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-----
T ss_pred ccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccc
Confidence 12689999999999999999999999999999999985443 334443
Q ss_pred ---------------chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 183 ---------------NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 183 ---------------~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
.++|++ +++++|++||++|.++++||+++
T Consensus 184 ~~~~~~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~ 227 (476)
T 1fxz_A 184 QSQKGKHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGE 227 (476)
T ss_dssp --------------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC
T ss_pred cccccccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhcc
Confidence 479987 99999999999999999999864
No 22
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.90 E-value=6.1e-24 Score=192.27 Aligned_cols=151 Identities=17% Similarity=0.185 Sum_probs=124.8
Q ss_pred chhhhcccc-CCCCccCCCCceEEEe--eeccCCCCCccc-EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEe
Q 047141 54 DHFVFSGLH-VAGNTSNPLGSRVTPV--TVAQIPGLNTLG-IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT 129 (215)
Q Consensus 54 ~dF~f~~~~-~~~~~~~~~g~~v~~~--~~~~~P~l~~lg-vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~ 129 (215)
+.|+|.-.. -. ......+|.++.+ ...+.|+|+++| +++++++++||++.+|||| +++|++||++|++++++++
T Consensus 12 ~p~~f~~~~~~~-~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~ 89 (397)
T 2phl_A 12 NPFYFNSDNSWN-TLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVK 89 (397)
T ss_dssp CTTEECGGGTEE-EEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEE
T ss_pred CCcEeccchhcc-ceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEe
Confidence 455555332 11 2224678888887 445669999998 9999999999999999999 5899999999999999998
Q ss_pred cCCCCceEEEEecCCcE------EEEcCCCeEEEEeCC-CCcEEEEEEEcCC-CC--ceeeec-----chhccCCCCCCH
Q 047141 130 SNPDNRLISKVLQKGDV------FVFPVGLIHFQRNVG-HGNAFSISGLSSQ-NP--GVITIA-----NTVFGSNPAIAD 194 (215)
Q Consensus 130 ~~~~~k~~~~~L~~GDv------~v~P~G~~H~~~N~g-~~~a~~i~~~~s~-~p--g~~~~~-----~~~f~~~p~~p~ 194 (215)
++ ++ .++.|++||+ ++||+|++||++|.| ++++++++++++. +| ..+.++ .++|++ +|+
T Consensus 90 ~~--~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~~ 163 (397)
T 2phl_A 90 PD--DR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FSK 163 (397)
T ss_dssp TT--TE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SCH
T ss_pred CC--Cc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CCH
Confidence 75 55 5899999999 999999999999999 7899999998643 34 334443 357887 999
Q ss_pred HHHHHHcCCCHHHHHHhh
Q 047141 195 DLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 195 ~vla~af~~~~~~v~~lk 212 (215)
+||+++|++|++++++||
T Consensus 164 ~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 164 HILEASFNSKFEEINRVL 181 (397)
T ss_dssp HHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHhhh
Confidence 999999999999999998
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.90 E-value=9.2e-24 Score=193.98 Aligned_cols=139 Identities=21% Similarity=0.385 Sum_probs=120.0
Q ss_pred CCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceE-----------
Q 047141 69 NPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLI----------- 137 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~----------- 137 (215)
...||.+..++..+ +.|+++|++++|++++|||+.+|||| ++.|++||++|+++++++.++. ++.|
T Consensus 29 ~se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~~~~~~~ 105 (465)
T 3qac_A 29 QAERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGC-PETYESGSQQFQGGE 105 (465)
T ss_dssp EETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTC-CCCC-----------
T ss_pred eCCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCC-Cceeecchhcccccc
Confidence 35688888888655 68999999999999999999999999 7999999999999999997631 2222
Q ss_pred -------------------------EEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC---------Cceeeec-
Q 047141 138 -------------------------SKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQN---------PGVITIA- 182 (215)
Q Consensus 138 -------------------------~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~---------pg~~~~~- 182 (215)
.+.+++||++++|+|+.||++|.|++++++++++++.| +..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG 185 (465)
T 3qac_A 106 DERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAG 185 (465)
T ss_dssp -------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSS
T ss_pred ccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecC
Confidence 56999999999999999999999999999999997643 3445664
Q ss_pred -----------------------chhccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 183 -----------------------NTVFGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 183 -----------------------~~~f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
.++|++ +++++|++||+++.++++||++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~ 236 (465)
T 3qac_A 186 KPQQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQA 236 (465)
T ss_dssp CCCCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhh
Confidence 379998 9999999999999999999975
No 24
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.90 E-value=2.9e-23 Score=188.94 Aligned_cols=135 Identities=20% Similarity=0.316 Sum_probs=113.1
Q ss_pred CCCCceEEEee-----eccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecC
Q 047141 69 NPLGSRVTPVT-----VAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQK 143 (215)
Q Consensus 69 ~~~g~~v~~~~-----~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~ 143 (215)
...+|.++.+. ...+|+|+++ ++++++++||++.+|| |++|+|++||++|+++++++++ ++.+.+.|++
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~~~--~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~---~~~~~~~l~~ 92 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQNH--RIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG---NNRKSFNLDE 92 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTTC--EEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS---SCEEEEEEET
T ss_pred EcCCcEEEEecccCCcchhcccccce--EEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec---CCEEEEEecC
Confidence 45677888884 3567888865 6668889999999999 8999999999999999999987 4557899999
Q ss_pred CcEEEEcCCCeEEEEeCCCC-cEEEEE-EEcCCCCceeee--------cchhccCCCCCCHHHHHHHcCCCHHHHHHhh
Q 047141 144 GDVFVFPVGLIHFQRNVGHG-NAFSIS-GLSSQNPGVITI--------ANTVFGSNPAIADDLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 144 GDv~v~P~G~~H~~~N~g~~-~a~~i~-~~~s~~pg~~~~--------~~~~f~~~p~~p~~vla~af~~~~~~v~~lk 212 (215)
||+++||+|++||++|.|+. .+.+++ ..++++||.+.. ..++|++ +|++||++||+++++++++|+
T Consensus 93 GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 93 GHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp TEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHT
T ss_pred CCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCcCHHHHHhhh
Confidence 99999999999999998764 566665 356778986543 1368887 999999999999999999997
No 25
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.90 E-value=2.2e-23 Score=192.75 Aligned_cols=137 Identities=20% Similarity=0.322 Sum_probs=116.6
Q ss_pred CCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceE------------
Q 047141 70 PLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLI------------ 137 (215)
Q Consensus 70 ~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~------------ 137 (215)
..|+.+.. ...+.|+|+++||+++|++++|||+++||+| +++|++||++|++.++++.++. ++.+
T Consensus 26 se~G~~e~-~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~-~e~f~~~~~~~~~~~~ 102 (496)
T 3ksc_A 26 SEGGLIET-WNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGC-PETFEEPQESEQGEGR 102 (496)
T ss_dssp ETTEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTC-CCC-------------
T ss_pred CCCcEEEe-ccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCC-Cccchhhhhccccccc
Confidence 34664544 4578899999999999999999999999999 7999999999999999998631 2222
Q ss_pred --------EEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCc--------eeeec-------------------
Q 047141 138 --------SKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPG--------VITIA------------------- 182 (215)
Q Consensus 138 --------~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg--------~~~~~------------------- 182 (215)
.+.|++||+|+||+|++||++|.|+++++++++++..|+. .+.++
T Consensus 103 ~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 182 (496)
T 3ksc_A 103 RYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQE 182 (496)
T ss_dssp --CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-------
T ss_pred ccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccc
Confidence 4599999999999999999999999999999999765532 33333
Q ss_pred -----chhccCCCCCCHHHHHHHcCCCHHHHHHhh
Q 047141 183 -----NTVFGSNPAIADDLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 183 -----~~~f~~~p~~p~~vla~af~~~~~~v~~lk 212 (215)
.++|++ |+.++|+.||+++.++++||+
T Consensus 183 ~~~~~~ni~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 183 QENEGNNIFSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ----CCSGGGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred ccccCCCchhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 479998 999999999999999999998
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.88 E-value=1.2e-22 Score=188.24 Aligned_cols=140 Identities=23% Similarity=0.418 Sum_probs=115.6
Q ss_pred CCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCC--------------C--
Q 047141 70 PLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP--------------D-- 133 (215)
Q Consensus 70 ~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------~-- 133 (215)
..|+.+.. ...+.|.|+++|+++++++++||++.+||||+ ++|++||++|+++++++.++. +
T Consensus 25 se~G~~e~-~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~ 102 (493)
T 2d5f_A 25 SEGGLIET-WNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSR 102 (493)
T ss_dssp CSSEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC---------
T ss_pred cCCcEEEE-eCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 34665544 55666999999999999999999999999998 699999999999999995430 0
Q ss_pred C-------ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCC---C-----Cceeeec----------------
Q 047141 134 N-------RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQ---N-----PGVITIA---------------- 182 (215)
Q Consensus 134 ~-------k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~---~-----pg~~~~~---------------- 182 (215)
+ ....+.|++||+++||+|++||++|.|+++++++++++.. | +..+.++
T Consensus 103 ~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~ 182 (493)
T 2d5f_A 103 SQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQ 182 (493)
T ss_dssp ----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC----
T ss_pred cccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccc
Confidence 0 0125689999999999999999999999999999999743 3 2333443
Q ss_pred -------------------chhccCCCCCCHHHHHHHcCCCHHHHHHhhhc
Q 047141 183 -------------------NTVFGSNPAIADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 183 -------------------~~~f~~~p~~p~~vla~af~~~~~~v~~lk~~ 214 (215)
.++|++ +++++|++||+++.+++++|+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~ 230 (493)
T 2d5f_A 183 QKSHGGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSP 230 (493)
T ss_dssp -----------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCT
T ss_pred ccccccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhc
Confidence 478987 99999999999999999999864
No 27
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.88 E-value=1.8e-22 Score=185.43 Aligned_cols=140 Identities=20% Similarity=0.285 Sum_probs=119.0
Q ss_pred CCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC-CCC-------------
Q 047141 69 NPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-PDN------------- 134 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~------------- 134 (215)
...++.+..++..+ |+|+++|++++|++++|||+++||+|+ ++|++||++|+++++++.++ ++.
T Consensus 22 ~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~ 99 (466)
T 3kgl_A 22 KAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGS 99 (466)
T ss_dssp EETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--
T ss_pred eCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccc
Confidence 45678788888776 999999999999999999999999998 89999999999999999762 000
Q ss_pred -------------------------------------------ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 047141 135 -------------------------------------------RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGL 171 (215)
Q Consensus 135 -------------------------------------------k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~ 171 (215)
+.....|++||+++||+|++||++|.|++++++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~ 179 (466)
T 3kgl_A 100 PFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVL 179 (466)
T ss_dssp ---------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEE
Confidence 0012589999999999999999999999999999999
Q ss_pred cCCCC--------ceeeec------------------chhccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 172 SSQNP--------GVITIA------------------NTVFGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 172 ~s~~p--------g~~~~~------------------~~~f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
+..|+ ..+.++ .++|++ ++.++|++||+++.++++||++
T Consensus 180 d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~e~~~kL~~ 244 (466)
T 3kgl_A 180 DLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDVRTAQQLQN 244 (466)
T ss_dssp ESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCHHHHHHHTC
T ss_pred cCCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCHHHHHHHhc
Confidence 65432 445554 278987 9999999999999999999975
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.87 E-value=6.1e-22 Score=183.80 Aligned_cols=139 Identities=20% Similarity=0.332 Sum_probs=115.5
Q ss_pred CCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCC----------CCc----
Q 047141 70 PLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP----------DNR---- 135 (215)
Q Consensus 70 ~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~----------~~k---- 135 (215)
..++.+..++ .+.|+|+++|+++++++++||++.+||||+ +.|++||++|++.++++.++. +++
T Consensus 28 se~G~~e~~~-~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~ 105 (510)
T 3c3v_A 28 SEGGYIETWN-PNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQ 105 (510)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC-------
T ss_pred cCCceEEEeC-CCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 4566565554 555999999999999999999999999998 799999999999999997531 000
Q ss_pred -------------------eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC--------ceeeec------
Q 047141 136 -------------------LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNP--------GVITIA------ 182 (215)
Q Consensus 136 -------------------~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~p--------g~~~~~------ 182 (215)
.+.+.|++||+++||+|++||++|.|+++++++++++..|+ ..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~ 185 (510)
T 3c3v_A 106 RPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQE 185 (510)
T ss_dssp -------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCT
T ss_pred cccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccc
Confidence 01478999999999999999999999999999999976542 223332
Q ss_pred ------------------------------------------------------chhccCCCCCCHHHHHHHcCCC-HHH
Q 047141 183 ------------------------------------------------------NTVFGSNPAIADDLLAKAFQVD-KSV 207 (215)
Q Consensus 183 ------------------------------------------------------~~~f~~~p~~p~~vla~af~~~-~~~ 207 (215)
.++|++ ++.++|++||+++ +++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~~ 262 (510)
T 3c3v_A 186 FLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQI 262 (510)
T ss_dssp TGGGCC------------------------------------------------CCTGGG---SCHHHHHHHHTCCCHHH
T ss_pred cchhhhccccccccccccccccccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHHH
Confidence 368998 9999999999999 999
Q ss_pred HHHhhh
Q 047141 208 VGQLQT 213 (215)
Q Consensus 208 v~~lk~ 213 (215)
+++|++
T Consensus 263 ~~~l~~ 268 (510)
T 3c3v_A 263 VQNLRG 268 (510)
T ss_dssp HHHHTT
T ss_pred HHHhhc
Confidence 999975
No 29
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.85 E-value=1.9e-21 Score=180.14 Aligned_cols=140 Identities=22% Similarity=0.380 Sum_probs=117.3
Q ss_pred CCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC-CC--------------
Q 047141 69 NPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-PD-------------- 133 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~-------------- 133 (215)
...|+.+..++ .++|+|+++||+++|+++.|+|+++||+|+ ++|++||++|++.++++.+. +.
T Consensus 27 ~se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~ 104 (531)
T 3fz3_A 27 QAEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQ 104 (531)
T ss_dssp EETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC-------
T ss_pred ccCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCcccccccccccccccc
Confidence 45677677766 669999999999999999999999999998 99999999999999998763 10
Q ss_pred ----------------------------------------------------------------CceEEEEecCCcEEEE
Q 047141 134 ----------------------------------------------------------------NRLISKVLQKGDVFVF 149 (215)
Q Consensus 134 ----------------------------------------------------------------~k~~~~~L~~GDv~v~ 149 (215)
.+...+.+++||++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviai 184 (531)
T 3fz3_A 105 QEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAI 184 (531)
T ss_dssp ------------------------------------------------------------CCSCEESCCEEEETTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEE
Confidence 0012468999999999
Q ss_pred cCCCeEEEEeCCCCcEEEEEEEcCCC--------Cceeeec---------------------------------------
Q 047141 150 PVGLIHFQRNVGHGNAFSISGLSSQN--------PGVITIA--------------------------------------- 182 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~i~~~~s~~--------pg~~~~~--------------------------------------- 182 (215)
|+|+.||++|.|+++++++++++..| |..+.++
T Consensus 185 PaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (531)
T 3fz3_A 185 PAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQ 264 (531)
T ss_dssp CTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC------------------------------
T ss_pred CCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhh
Confidence 99999999999999999999995432 2223332
Q ss_pred ----chhccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 183 ----NTVFGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 183 ----~~~f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
.++|++ ++.++|+.||+++.++++||++
T Consensus 265 ~~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~ 296 (531)
T 3fz3_A 265 QGNGNNVFSG---FNTQLLAQALNVNEETARNLQG 296 (531)
T ss_dssp --CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHT
T ss_pred cccCCCeeec---CCHHHHHHHHCCCHHHHHHHhc
Confidence 379998 9999999999999999999975
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=1.6e-20 Score=166.48 Aligned_cols=148 Identities=16% Similarity=0.187 Sum_probs=124.9
Q ss_pred hhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCc
Q 047141 56 FVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNR 135 (215)
Q Consensus 56 F~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k 135 (215)
|.|+....++. ...|+.++.++..++|.+.+ +++.++.++||+..++|||+++.|++||++|++++++++++ ++
T Consensus 21 ~~~~~~~~~~~--~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~--g~ 94 (361)
T 2vqa_A 21 FTYAFSKTPLV--LYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE--GK 94 (361)
T ss_dssp SEECGGGSCCE--EETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT--SC
T ss_pred eEEEcccCCce--ecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC--Cc
Confidence 66665444433 24788899999999999885 48889999999999999999889999999999999998764 33
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCc---eeeecchhccCCCCCCHHHHHHHcCCCHHHHHHhh
Q 047141 136 LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPG---VITIANTVFGSNPAIADDLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 136 ~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg---~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~lk 212 (215)
...+.|++||+++||+|..|+++|.++++++++++++..++. .+.. .++|+. +|.++|+++|+++.+.+++++
T Consensus 95 ~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~~---~p~~vLa~~~~v~~~~~~~l~ 170 (361)
T 2vqa_A 95 VEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSV-TDWLSH---TPIAWVEENLGWTAAQVAQLP 170 (361)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEH-HHHHHT---SCHHHHHHHHTCCHHHHTTSC
T ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecH-hHHHHh---CCHHHHHHHhCcCHHHHHhcc
Confidence 336899999999999999999999999999999999877664 3444 456887 999999999999999999886
Q ss_pred h
Q 047141 213 T 213 (215)
Q Consensus 213 ~ 213 (215)
+
T Consensus 171 ~ 171 (361)
T 2vqa_A 171 K 171 (361)
T ss_dssp S
T ss_pred c
Confidence 4
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=4.8e-19 Score=158.52 Aligned_cols=153 Identities=16% Similarity=0.212 Sum_probs=126.1
Q ss_pred ccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC
Q 047141 52 QADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 131 (215)
Q Consensus 52 ~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 131 (215)
.+..|+|+....++ . ...++.++.+....++..+ ++++.++.++||+..++|||+.+.|++||++|++++.+.+.+
T Consensus 222 ~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~ 297 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD 297 (385)
T ss_dssp CSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET
T ss_pred CCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC
Confidence 35567777655554 3 2346677888877777654 468888999999999999999779999999999999987554
Q ss_pred CCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeecchhccCCCCCCHHHHHHHcCCCHHHHHHh
Q 047141 132 PDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIANTVFGSNPAIADDLLAKAFQVDKSVVGQL 211 (215)
Q Consensus 132 ~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~l 211 (215)
++-..+.|++||++++|+|..|++.|.|++++++++++....+....+.++ ++. +++++++++|+++++++++|
T Consensus 298 --g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~-l~~---~~~~v~~~~f~~~~~~~~~l 371 (385)
T 1j58_A 298 --GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQW-LAM---LPETFVQAHLDLGKDFTDVL 371 (385)
T ss_dssp --TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHH-HHT---SCHHHHHHHHTCCHHHHTTC
T ss_pred --CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHH-HHh---CCHHHHHHHhCCCHHHHHhh
Confidence 322478999999999999999999999999999999998887777766554 676 99999999999999999999
Q ss_pred hhc
Q 047141 212 QTK 214 (215)
Q Consensus 212 k~~ 214 (215)
++.
T Consensus 372 ~~~ 374 (385)
T 1j58_A 372 SKE 374 (385)
T ss_dssp CSS
T ss_pred hcc
Confidence 764
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.79 E-value=3e-19 Score=159.86 Aligned_cols=147 Identities=21% Similarity=0.247 Sum_probs=122.1
Q ss_pred hhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCc
Q 047141 56 FVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNR 135 (215)
Q Consensus 56 F~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k 135 (215)
+.|+....++.. ..|+.++.++...+|.++ ++++.++.+.||+..++|||+ +.|++||++|++++++++.+ ++
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~--g~ 120 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK--GR 120 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT--SC
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC--Cc
Confidence 666654444432 468889999999999988 678999999999999999999 79999999999999998764 55
Q ss_pred eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceee--ecchhccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 136 LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVIT--IANTVFGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 136 ~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~--~~~~~f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
.+.+.|++||+++||+|..|++.|.+ +++.++.+++...+.... ...++|+. +|.++|+++|+++.++++++++
T Consensus 121 ~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 121 SFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 44569999999999999999999987 568999999887664321 23567887 9999999999999998888754
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.78 E-value=6.6e-20 Score=130.57 Aligned_cols=73 Identities=29% Similarity=0.288 Sum_probs=68.1
Q ss_pred hccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC
Q 047141 58 FSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN 131 (215)
Q Consensus 58 f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~ 131 (215)
|+++++.++++|..|. ++.+++.++|+|+++|+|++|+++.||++++||||++|+|++||++|++++++++++
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 6778888888877776 499999999999999999999999999999999999999999999999999999875
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=2.2e-14 Score=108.25 Aligned_cols=84 Identities=24% Similarity=0.279 Sum_probs=72.3
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++.+.++.++||+..++|||+...|++||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.+++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~ 111 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN----GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST----TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC----Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEE
Confidence 4578889999999999999997699999999999987622 33 68999999999999999999999999999999
Q ss_pred EEcCCCCcee
Q 047141 170 GLSSQNPGVI 179 (215)
Q Consensus 170 ~~~s~~pg~~ 179 (215)
++....++..
T Consensus 112 v~~p~~~~~~ 121 (125)
T 3h8u_A 112 VVAPGNAGFA 121 (125)
T ss_dssp EEESTTCCCC
T ss_pred EECCCcccch
Confidence 9877666543
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.51 E-value=4.1e-14 Score=119.97 Aligned_cols=117 Identities=17% Similarity=0.088 Sum_probs=84.8
Q ss_pred CccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEE---
Q 047141 51 AQADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGF--- 127 (215)
Q Consensus 51 ~~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~--- 127 (215)
-+.+||.+..+..+....++.|-....+. +...+.++++.+++++||+..++|+|++..|++||++|++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~ 82 (239)
T 2xlg_A 7 HTFDDIPMPKLADPLLIYTPANEIFDIAS----CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTK 82 (239)
T ss_dssp CBCSCCCCCCCSSCEEEECTTCCEEEEEE----EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEE
T ss_pred cchhhCCCccccccceeecCCceEEEEec----cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEec
Confidence 34556655554433333334343333322 22334567899999999999999999988999999999999977
Q ss_pred -----Eec-----CCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE-EEEE
Q 047141 128 -----VTS-----NPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS-ISGL 171 (215)
Q Consensus 128 -----~~~-----~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~-i~~~ 171 (215)
.+. .++++++.+.+++||++++|+|.+|.+.|.+++++++ +.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 83 QYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp ECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred ccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 221 0113455789999999999999999999999999998 6666
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.51 E-value=1.4e-13 Score=108.84 Aligned_cols=86 Identities=19% Similarity=0.210 Sum_probs=73.4
Q ss_pred cEEEEEEEEcCCc-ccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCC-CeEEEEeCCCCcEEE
Q 047141 90 GIALARIDYAPWG-VVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVG-LIHFQRNVGHGNAFS 167 (215)
Q Consensus 90 gvs~~~~~l~pgg-~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G-~~H~~~N~g~~~a~~ 167 (215)
++.+.++.++||+ ..++|||+...|++||++|++++.+. ++ .+.|++||++++|+| ..|.+.|.+++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~ 117 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME-----ND--QYPIAPGDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTSCCEEEECCSSSCEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC-----CE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEE
Confidence 5688888999999 58999997689999999999999872 34 689999999999997 999999999999999
Q ss_pred EEEEcCCCCceeeec
Q 047141 168 ISGLSSQNPGVITIA 182 (215)
Q Consensus 168 i~~~~s~~pg~~~~~ 182 (215)
+++.....+....++
T Consensus 118 l~v~~p~~~~~~~~p 132 (162)
T 3l2h_A 118 LVIGQRLDQDVVDYP 132 (162)
T ss_dssp EEEEECCSEEEEEET
T ss_pred EEEECCCCCCeEecC
Confidence 998876654444443
No 37
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.47 E-value=1.4e-13 Score=100.00 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=67.1
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCC-ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDN-RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.+.+.+++++||+..++|.|+...|++||++|++++.+.+ + + ...|++||++++|+|..|...|.|+++++++
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE----GSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT----EEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC----CCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 5788999999999999999997557999999999998732 2 3 6899999999999999999999999999988
Q ss_pred EEE
Q 047141 169 SGL 171 (215)
Q Consensus 169 ~~~ 171 (215)
.+-
T Consensus 91 ~v~ 93 (97)
T 2fqp_A 91 EIE 93 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.47 E-value=3.1e-13 Score=97.40 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=69.2
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.++.+.++.++||...++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++.++
T Consensus 26 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~ 98 (105)
T 1v70_A 26 ERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG-----EE--EALLAPGMAAFAPAGAPHGVRNESASPALLL 98 (105)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 3578889999999999999999768999999999999872 33 6899999999999999999999999999999
Q ss_pred EEEcC
Q 047141 169 SGLSS 173 (215)
Q Consensus 169 ~~~~s 173 (215)
+++..
T Consensus 99 ~v~~p 103 (105)
T 1v70_A 99 VVTAP 103 (105)
T ss_dssp EEEES
T ss_pred EEeCC
Confidence 88753
No 39
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.47 E-value=3.6e-13 Score=106.60 Aligned_cols=85 Identities=19% Similarity=0.179 Sum_probs=70.7
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCC--CCceEEEEecCCcEEEEcCCCeEEEEeCC-CCcEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP--DNRLISKVLQKGDVFVFPVGLIHFQRNVG-HGNAF 166 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--~~k~~~~~L~~GDv~v~P~G~~H~~~N~g-~~~a~ 166 (215)
++.+.++.++||+..++|+|+ ..|++||++|++++.+.+..+ .++...+.+++||++++|+|..|...|.+ ++++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 468888899999999999998 589999999999998854210 01113789999999999999999999999 89999
Q ss_pred EEEEEcCCC
Q 047141 167 SISGLSSQN 175 (215)
Q Consensus 167 ~i~~~~s~~ 175 (215)
+++++....
T Consensus 119 ~l~i~~~~~ 127 (163)
T 1lr5_A 119 VLVIISRPP 127 (163)
T ss_dssp EEEEEESSS
T ss_pred EEEEECCCC
Confidence 999886543
No 40
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.44 E-value=1.1e-12 Score=102.44 Aligned_cols=84 Identities=18% Similarity=0.160 Sum_probs=70.3
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++.+.++.+.||...++|||++..|++||++|++++.+.+... ...+...|++||++++|+|..|.+.|.+++++.+++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~-~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD-NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT-BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc-cceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 4578888999999999999997779999999999999854310 011238999999999999999999999999999998
Q ss_pred EEcCC
Q 047141 170 GLSSQ 174 (215)
Q Consensus 170 ~~~s~ 174 (215)
++...
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87644
No 41
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.44 E-value=6.1e-13 Score=106.02 Aligned_cols=86 Identities=19% Similarity=0.119 Sum_probs=73.7
Q ss_pred ccEEEEEEEEcCCccc-CCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCC--CeEEEEeCCCCcE
Q 047141 89 LGIALARIDYAPWGVV-PPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVG--LIHFQRNVGHGNA 165 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~-ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G--~~H~~~N~g~~~a 165 (215)
..+.+.+++++||+.. ++|||+...|++||++|++++.+. ++ .+.|++||++++|+| ..|.+.|.+++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~-----~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~ 113 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD-----QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPA 113 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCCCBEEECCSSSCE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC-----CE--EEEeCCCCEEEECCCCCcceEEEECCCCCE
Confidence 3578888999999965 899999767999999999999873 34 689999999999999 9999999999999
Q ss_pred EEEEEEcCCCCceeee
Q 047141 166 FSISGLSSQNPGVITI 181 (215)
Q Consensus 166 ~~i~~~~s~~pg~~~~ 181 (215)
+++++...........
T Consensus 114 ~~l~v~~p~~~d~~~y 129 (163)
T 3i7d_A 114 TFLVVGTRTPTETAYY 129 (163)
T ss_dssp EEEEEEECCSCEEEEE
T ss_pred EEEEEECCCCCCcccC
Confidence 9999987665544444
No 42
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.44 E-value=2.9e-12 Score=102.63 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=86.7
Q ss_pred CCCccchhhhccccCCC---CccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEE
Q 047141 49 KLAQADHFVFSGLHVAG---NTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEV 125 (215)
Q Consensus 49 ~~~~~~dF~f~~~~~~~---~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~ 125 (215)
.-+..+++.+....... .-....|...+.+..... +....++.+.++.++||+..++|||+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 45566677666643211 111134555555443332 22344678899999999999999998 69999999999999
Q ss_pred EEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC-CCcEEEEEEEcCC
Q 047141 126 GFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG-HGNAFSISGLSSQ 174 (215)
Q Consensus 126 ~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g-~~~a~~i~~~~s~ 174 (215)
.+. ++ .+.|++||++++|+|..|.+.|.+ ++++.+++++...
T Consensus 90 ~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VLD-----DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EET-----TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEC-----CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 872 34 789999999999999999999999 9999999988654
No 43
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.42 E-value=3.4e-12 Score=104.24 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=72.9
Q ss_pred ccEEEEEEEEcCCcc------cCCccCC--CCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeC
Q 047141 89 LGIALARIDYAPWGV------VPPHVHP--RATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNV 160 (215)
Q Consensus 89 lgvs~~~~~l~pgg~------~ppH~Hp--~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~ 160 (215)
-++.+..+.++||+. .++|+|+ +..|++||++|++++.+.+.. ++.+...+++||++++|+|..|...|.
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~--g~~~~~~l~~GD~v~ip~g~~H~~~N~ 142 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE--GDAKWISMEPGTVVYVPPYWAHRTVNI 142 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT--CCEEEEEECTTCEEEECTTCEEEEEEC
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC--CcEEEEEECCCcEEEECCCCeEEEEEC
Confidence 357788889999998 7899998 357999999999999987653 455678999999999999999999999
Q ss_pred CCCcEEEEEEEcCC
Q 047141 161 GHGNAFSISGLSSQ 174 (215)
Q Consensus 161 g~~~a~~i~~~~s~ 174 (215)
|++++++++++...
T Consensus 143 g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 143 GDEPFIFLAIYPAD 156 (190)
T ss_dssp SSSCEEEEEEEETT
T ss_pred CcccEEEEEEECCC
Confidence 99999999988654
No 44
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.41 E-value=7.2e-13 Score=107.11 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=72.4
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.|..+.+++++||+..++|.|+ ..|++||++|++++.+.+ ++ .+.|++||++ ||+|..|.++|.|+++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~----ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l 148 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD----GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIA 148 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG----GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC----Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEE
Confidence 4788999999999999999998 589999999999998742 23 6899999999 99999999999999999999
Q ss_pred EEEcCCCCc
Q 047141 169 SGLSSQNPG 177 (215)
Q Consensus 169 ~~~~s~~pg 177 (215)
+++....|-
T Consensus 149 ~V~~P~~p~ 157 (172)
T 3es1_A 149 FILIEAPAY 157 (172)
T ss_dssp EEEEECCCC
T ss_pred EEEcCCCce
Confidence 999877773
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.41 E-value=1.7e-12 Score=99.69 Aligned_cols=86 Identities=21% Similarity=0.287 Sum_probs=72.7
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.++.+.++.++||+..++|+|+. .|++||++|++++.+... ++ .+.+++||++++|+|..|...|.+++++.++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l 110 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPDQ---GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFL 110 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGGG---TE--EEEECTTCEEEECTTCCBEEECCTTCCEEEE
T ss_pred CcEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeEC---CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEE
Confidence 36788899999999999999994 888999999999982111 34 7899999999999999999999999999999
Q ss_pred EEEcCCCCceee
Q 047141 169 SGLSSQNPGVIT 180 (215)
Q Consensus 169 ~~~~s~~pg~~~ 180 (215)
.++....|....
T Consensus 111 ~i~~~~~~~~~~ 122 (145)
T 3ht1_A 111 VVAPCERPPVRN 122 (145)
T ss_dssp EEEESCCCCCEE
T ss_pred EEECCCCCCeeE
Confidence 998776665433
No 46
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.41 E-value=1.6e-12 Score=95.29 Aligned_cols=78 Identities=22% Similarity=0.198 Sum_probs=69.1
Q ss_pred ccEEEEEEEEcCCcccCCc--cCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 89 LGIALARIDYAPWGVVPPH--VHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH--~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
.++.+.++.+.||...++| +|++..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.+++++.
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~ 91 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD-----GH--TQALQAGSLIAIERGQAHEIRNTGDTPLK 91 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET-----TE--EEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEE
Confidence 3578889999999998888 998679999999999999872 34 68999999999999999999999999999
Q ss_pred EEEEEcC
Q 047141 167 SISGLSS 173 (215)
Q Consensus 167 ~i~~~~s 173 (215)
+++++..
T Consensus 92 ~~~v~~~ 98 (113)
T 2gu9_A 92 TVNFYHP 98 (113)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9988754
No 47
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.40 E-value=2e-13 Score=100.36 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=66.9
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+.+.|++++||+..++|+|+...|+.+|++|++++...+ ++.....+++||++++|+|..|...|.|+++++++.
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC----CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 5789999999999999999998789999999999986532 332356799999999999999999999999999998
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
+
T Consensus 92 V 92 (98)
T 3lag_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 7
No 48
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.37 E-value=3.1e-12 Score=98.22 Aligned_cols=78 Identities=21% Similarity=0.195 Sum_probs=68.7
Q ss_pred CcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 87 NTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 87 ~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
.+..+.+.++.++||+..++|+|++..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++++++
T Consensus 53 ~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~ 125 (133)
T 1o4t_A 53 HNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN-----GK--DVPIKAGDVCFTDSGESHSIENTGNTDLE 125 (133)
T ss_dssp TTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET-----TE--EEEEETTEEEEECTTCEEEEECCSSSCEE
T ss_pred CCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC-----CE--EEEeCCCcEEEECCCCcEEeEECCCCCEE
Confidence 344567889999999999999998669999999999999872 34 68999999999999999999999999999
Q ss_pred EEEEE
Q 047141 167 SISGL 171 (215)
Q Consensus 167 ~i~~~ 171 (215)
++++.
T Consensus 126 ~l~v~ 130 (133)
T 1o4t_A 126 FLAVI 130 (133)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98865
No 49
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.37 E-value=2.9e-12 Score=101.74 Aligned_cols=79 Identities=11% Similarity=0.038 Sum_probs=70.9
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.++.+.++.++||+..++|||+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|...|.+++++.++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~-----g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l 113 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVG-----ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFL 113 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 5678888999999999999999 48999999999999872 34 7899999999999999999999999999999
Q ss_pred EEEcCCC
Q 047141 169 SGLSSQN 175 (215)
Q Consensus 169 ~~~~s~~ 175 (215)
++++.+.
T Consensus 114 ~i~~~~~ 120 (156)
T 3kgz_A 114 CVVNAAR 120 (156)
T ss_dssp EEEESSC
T ss_pred EEEeCCC
Confidence 9987553
No 50
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.37 E-value=2.1e-12 Score=97.31 Aligned_cols=76 Identities=24% Similarity=0.442 Sum_probs=67.6
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++.+.++.++||+..++|+|+. .|++||++|++++.+. ++ .+.+++||++++|+|..|...|.++ ++.++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~ 110 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTIG-----EE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLD 110 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEET-----TE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEE
Confidence 5688999999999999999995 9999999999999872 34 6899999999999999999999987 888888
Q ss_pred EEcCC
Q 047141 170 GLSSQ 174 (215)
Q Consensus 170 ~~~s~ 174 (215)
++...
T Consensus 111 v~~p~ 115 (126)
T 4e2g_A 111 IFSPP 115 (126)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 88643
No 51
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.36 E-value=1.9e-12 Score=97.05 Aligned_cols=73 Identities=16% Similarity=0.267 Sum_probs=63.0
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++.+.++.++||...++|||+. .|++||++|++++.+. ++ .+.|++||.+++|+|..|...|.++....++.
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~ 106 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVD-----GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTV 106 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEET-----TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEE
T ss_pred CEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 5789999999999999999995 8999999999999872 34 68999999999999999999998665554444
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
+
T Consensus 107 v 107 (114)
T 3fjs_A 107 V 107 (114)
T ss_dssp E
T ss_pred E
Confidence 3
No 52
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.36 E-value=5.7e-12 Score=102.22 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=70.0
Q ss_pred CCCCcccEEEEEEEEcCCcccC---CccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeC
Q 047141 84 PGLNTLGIALARIDYAPWGVVP---PHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNV 160 (215)
Q Consensus 84 P~l~~lgvs~~~~~l~pgg~~p---pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~ 160 (215)
+...+..+.+.+++++||+..+ +|+|+. .|++||++|++++.+.+. +....+.|++||.++||++.+|.+.|.
T Consensus 110 ~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~---~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 110 RTKRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDK---ENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCTTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCT---TSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCc---CCcccEEECCCCEEEeCCCCceEEEec
Confidence 3444556889999999999875 799985 999999999999988431 111278999999999999999999999
Q ss_pred -CCCcEEEEEEE
Q 047141 161 -GHGNAFSISGL 171 (215)
Q Consensus 161 -g~~~a~~i~~~ 171 (215)
+++++++++++
T Consensus 186 ~~~~~~~~l~v~ 197 (198)
T 2bnm_A 186 KGTGSAKLIAVN 197 (198)
T ss_dssp TTSCCEEEEEEE
T ss_pred CCCCCeEEEEEe
Confidence 99999998875
No 53
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.35 E-value=1e-11 Score=92.52 Aligned_cols=74 Identities=12% Similarity=0.192 Sum_probs=65.0
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEE-EecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISK-VLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~-~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
++.+.++.+.||+..++|||+ ..|++||++|++++.+. ++ .. .+++||++++|+|..|...|.+++++.++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l 97 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLE-----DQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFF 97 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEET-----TS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEEC-----CE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 456778889999999999998 59999999999999873 23 45 89999999999999999999999999888
Q ss_pred EEE
Q 047141 169 SGL 171 (215)
Q Consensus 169 ~~~ 171 (215)
++.
T Consensus 98 ~i~ 100 (117)
T 2b8m_A 98 VVK 100 (117)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 54
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.35 E-value=3.9e-12 Score=102.01 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=70.2
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.++.+.++++.||+..++|||+. .|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+++++.++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v~-----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l 122 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMVG-----RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFL 122 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 56788889999999999999995 8999999999999772 34 7899999999999999999999999999999
Q ss_pred EEEcCC
Q 047141 169 SGLSSQ 174 (215)
Q Consensus 169 ~~~~s~ 174 (215)
++....
T Consensus 123 ~i~~~~ 128 (166)
T 3jzv_A 123 CMVNAE 128 (166)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 988654
No 55
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.34 E-value=2.3e-11 Score=95.13 Aligned_cols=99 Identities=21% Similarity=0.305 Sum_probs=78.5
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEE-EEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLIS-KVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~-~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
..++.+.++.++||+..++|+|+. .|++||++|++++.+. ++ . +.+++||++++|+|..|+..|.+++++.
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~-----~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 116 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQER-----GK--PARILKKGDVVEIPPNVVHWHGAAPDEELV 116 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEET-----TS--CCEEEETTCEEEECTTCCEEEEEBTTBCEE
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEEC-----CE--EEEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 346788999999999999999996 9999999999999873 33 4 7899999999999999999999999999
Q ss_pred EEEEEcCCCCceeeecchhccCCCCCCHHHHHHHc
Q 047141 167 SISGLSSQNPGVITIANTVFGSNPAIADDLLAKAF 201 (215)
Q Consensus 167 ~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af 201 (215)
++++........ ..++.. +.++...++.
T Consensus 117 ~l~v~~~~~~~~----~~wl~~---v~~e~~~~~~ 144 (147)
T 2f4p_A 117 HIGISTQVHLGP----AEWLGS---VTEEEYRKAT 144 (147)
T ss_dssp EEEEECCGGGCC----CEECCC---CCHHHHHHHH
T ss_pred EEEEEccCCCCC----ceeccc---CCHHHhhhcc
Confidence 998876532211 123444 6666665543
No 56
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.32 E-value=1.7e-12 Score=95.51 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=64.9
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+.+.+++++||+..++|.|+...+++++++|++++.. .+ ++.....+++||++++|+|..|+..|.|++++++++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~d--G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TT--SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CC--CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 57899999999999999999976667777899988765 22 331246899999999999999999999999999998
Q ss_pred EE
Q 047141 170 GL 171 (215)
Q Consensus 170 ~~ 171 (215)
+-
T Consensus 92 vE 93 (98)
T 2ozi_A 92 IE 93 (98)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 57
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.32 E-value=8.6e-12 Score=92.45 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=66.2
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++.+.++.+.||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ ++.++.
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 102 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVD-----GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILID 102 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEEESS--CEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEEC-----CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEE
Confidence 478889999999999999999 69999999999999872 34 689999999999999999999987 678888
Q ss_pred EEcCCC
Q 047141 170 GLSSQN 175 (215)
Q Consensus 170 ~~~s~~ 175 (215)
++....
T Consensus 103 v~~p~~ 108 (116)
T 2pfw_A 103 TFSPAR 108 (116)
T ss_dssp EEESCC
T ss_pred EECCch
Confidence 876543
No 58
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.31 E-value=1.7e-11 Score=92.45 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=67.2
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
..+.+...+++||...++|||+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|...|.+++++.++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~-----~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 103 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIN-----DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFY 103 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEEC-----CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEE
Confidence 4567888899999999999997 69999999999999882 34 6899999999999999999999999998888
Q ss_pred EEEc
Q 047141 169 SGLS 172 (215)
Q Consensus 169 ~~~~ 172 (215)
++.-
T Consensus 104 ~i~f 107 (128)
T 4i4a_A 104 TIWW 107 (128)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 59
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.31 E-value=7.8e-12 Score=94.92 Aligned_cols=77 Identities=18% Similarity=0.197 Sum_probs=68.8
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
..++.+.++.++||+..++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|..|...|.+++++.+
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~ 116 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE-----QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEF 116 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 55688999999999999999999 69999999999999873 33 689999999999999999999999999999
Q ss_pred EEEEc
Q 047141 168 ISGLS 172 (215)
Q Consensus 168 i~~~~ 172 (215)
++++.
T Consensus 117 l~v~~ 121 (126)
T 1vj2_A 117 LCLIP 121 (126)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88764
No 60
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.30 E-value=1.1e-11 Score=94.52 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=60.0
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
+.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ .+.+++||++++|+|..|.+.|.+++ +.++++
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED----IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT----TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC----cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 456666677888899999996699999999999998732 14 78999999999999999999998774 677777
Q ss_pred EcCCC
Q 047141 171 LSSQN 175 (215)
Q Consensus 171 ~~s~~ 175 (215)
+....
T Consensus 116 ~~p~~ 120 (134)
T 2o8q_A 116 VSPAG 120 (134)
T ss_dssp ESSTT
T ss_pred ECCCc
Confidence 75543
No 61
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.30 E-value=7.1e-12 Score=94.57 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=66.0
Q ss_pred cccEEEEEEEEcCCcccC-CccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 88 TLGIALARIDYAPWGVVP-PHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~p-pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
..++.+.++.+.||...+ +|+|+...+++||++|++++.+. ++ .+.+++||++++|+|..|...|.+++++.
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID-----GE--KIELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET-----TE--EEEEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 345677888999999888 89998533455599999999872 34 68999999999999999999999999999
Q ss_pred EEEEEcCC
Q 047141 167 SISGLSSQ 174 (215)
Q Consensus 167 ~i~~~~s~ 174 (215)
++++....
T Consensus 96 ~~~i~~~~ 103 (125)
T 3cew_A 96 FLCIQVKA 103 (125)
T ss_dssp EEEEEEET
T ss_pred EEEEEcCC
Confidence 88876443
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.27 E-value=3.3e-11 Score=89.13 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=63.0
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++.+.++.+.||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ ++.+++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~ 108 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITID-----QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLL 108 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTSCEEEEESS--CEEEEE
T ss_pred ceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEECC--CceEEE
Confidence 567888999999999999999 59999999999999872 34 689999999999999999999987 566666
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
++-
T Consensus 109 v~~ 111 (115)
T 1yhf_A 109 VVV 111 (115)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 63
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.26 E-value=2e-11 Score=98.77 Aligned_cols=79 Identities=20% Similarity=0.174 Sum_probs=66.6
Q ss_pred CCcccEEEEEEEEcCCcccC--CccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCC
Q 047141 86 LNTLGIALARIDYAPWGVVP--PHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHG 163 (215)
Q Consensus 86 l~~lgvs~~~~~l~pgg~~p--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~ 163 (215)
..+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+. ++ .+.|++||+++||+|.+|.+.|.+++
T Consensus 99 ~~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~-----~~--~~~l~~GD~i~i~~~~~H~~~n~~~~ 170 (192)
T 1y9q_A 99 AADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFD-----EQ--WHELQQGEHIRFFSDQPHGYAAVTEK 170 (192)
T ss_dssp ETTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEET-----TE--EEEECTTCEEEEECSSSEEEEESSSC
T ss_pred CCCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEEcCCCCeEeECCCCC
Confidence 34456888999999998765 77776 59999999999999872 34 68999999999999999999999999
Q ss_pred cEEEEEEEcC
Q 047141 164 NAFSISGLSS 173 (215)
Q Consensus 164 ~a~~i~~~~s 173 (215)
++ +++++..
T Consensus 171 ~~-~l~v~~~ 179 (192)
T 1y9q_A 171 AV-FQNIVAY 179 (192)
T ss_dssp EE-EEEEEEC
T ss_pred cE-EEEEEec
Confidence 99 7776643
No 64
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.26 E-value=2.1e-11 Score=97.97 Aligned_cols=74 Identities=20% Similarity=0.101 Sum_probs=64.5
Q ss_pred EEEEEEEEcC-CcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 91 IALARIDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 91 vs~~~~~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
+...+++++| |+...+|.|.++.|++||++|++++.+. ++ .+.|++||.+++|+|..|.+.|.+++++++++
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~-----g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~ 160 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC-----KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC-----CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEE
Confidence 5677889999 7776776666689999999999999983 34 78999999999999999999999999999988
Q ss_pred EE
Q 047141 170 GL 171 (215)
Q Consensus 170 ~~ 171 (215)
+.
T Consensus 161 Vq 162 (166)
T 2vpv_A 161 VQ 162 (166)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.25 E-value=1.9e-11 Score=104.01 Aligned_cols=78 Identities=13% Similarity=0.051 Sum_probs=66.8
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCC-CcEE
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGH-GNAF 166 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~-~~a~ 166 (215)
...+.+.++.++||+..+.|+|+...|++||++|++++.+. ++ .+.|++||++++|+|..|++.|.|+ ++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~-----~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~ 248 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD-----NN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFS 248 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS-----SC--EEEEETTCEEEECSSEEEEEEEC----CEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEE
Confidence 45678899999999999999998779999999999999873 33 6899999999999999999999999 9999
Q ss_pred EEEEEc
Q 047141 167 SISGLS 172 (215)
Q Consensus 167 ~i~~~~ 172 (215)
++...+
T Consensus 249 ~l~~~d 254 (261)
T 1rc6_A 249 YIYSKD 254 (261)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 987654
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.22 E-value=3.2e-11 Score=101.63 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=67.9
Q ss_pred EEEEEEEEcC-CcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 91 IALARIDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 91 vs~~~~~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
+.+..+.++| |+..++|||+ ..|++||++|++++.+. ++ ...|++||.+++|+|..|..+|.|+++++++.
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 216 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVE-----GC--TVEMKFGTAYFCEPREDHGAINRSEKESKSIN 216 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred eEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 4566778999 8889999999 48999999999999873 33 68899999999999999999999999999999
Q ss_pred EEcCCC
Q 047141 170 GLSSQN 175 (215)
Q Consensus 170 ~~~s~~ 175 (215)
++....
T Consensus 217 v~~p~~ 222 (243)
T 3h7j_A 217 IFFPPR 222 (243)
T ss_dssp EEESCS
T ss_pred EEcCCh
Confidence 997543
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.20 E-value=7.6e-11 Score=86.09 Aligned_cols=75 Identities=20% Similarity=0.240 Sum_probs=61.9
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEE-EEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEI-LTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
++.+.++.+.||...++|+|+...|+ +||++|++++.+.+ ++ ...|++||++++|+|..|...|.++ +.++
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l 103 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG----DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVL 103 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG----GC--EEEECTTEEEEEETTSCEEEEESSS--EEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC----CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEE
Confidence 46788889999999999999854788 89999999997731 13 6899999999999999999999865 5566
Q ss_pred EEEc
Q 047141 169 SGLS 172 (215)
Q Consensus 169 ~~~~ 172 (215)
.+++
T Consensus 104 ~~~~ 107 (110)
T 2q30_A 104 VTIA 107 (110)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6554
No 68
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.19 E-value=1.3e-10 Score=86.10 Aligned_cols=72 Identities=15% Similarity=0.173 Sum_probs=61.0
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
+.+..+.+.||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|.+|...|. +++.++++
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i 107 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFD-----DQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQI 107 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEE
T ss_pred ceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEEC-----CE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEE
Confidence 56677778999999999999 59999999999999872 34 68999999999999999999986 56777765
Q ss_pred Ec
Q 047141 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
..
T Consensus 108 ~~ 109 (114)
T 2ozj_A 108 TL 109 (114)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.17 E-value=2.1e-10 Score=98.35 Aligned_cols=77 Identities=13% Similarity=0.127 Sum_probs=68.1
Q ss_pred cccEEEEEEEEcCCcccCC-ccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCC-CcE
Q 047141 88 TLGIALARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGH-GNA 165 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~-~~a 165 (215)
+..+.+.++.++||+..+. |+|+ ..|++||++|++++.+. ++ .+.|++||+++||+|.+|.++|.++ +++
T Consensus 179 ~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~-----~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~ 250 (274)
T 1sef_A 179 DFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLD-----NE--WYPVEKGDYIFMSAYVPQAAYAVGREEPL 250 (274)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEEECSSSCE
T ss_pred CCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCCE
Confidence 3468889999999999888 9997 59999999999999882 34 6899999999999999999999999 899
Q ss_pred EEEEEEc
Q 047141 166 FSISGLS 172 (215)
Q Consensus 166 ~~i~~~~ 172 (215)
.++...+
T Consensus 251 ~~l~~~~ 257 (274)
T 1sef_A 251 MYVYSKD 257 (274)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 8887743
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.16 E-value=1.2e-10 Score=101.37 Aligned_cols=77 Identities=23% Similarity=0.254 Sum_probs=68.0
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+++.++.+.||+..++|||++..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++ ++.++.
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~ 116 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD-----GE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVS 116 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECST-TEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEE
Confidence 578888999999999999998779999999999999872 34 6899999999999999999999987 688888
Q ss_pred EEcCC
Q 047141 170 GLSSQ 174 (215)
Q Consensus 170 ~~~s~ 174 (215)
+++..
T Consensus 117 ~~~p~ 121 (337)
T 1y3t_A 117 YTMKG 121 (337)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 87544
No 71
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.13 E-value=1.1e-10 Score=103.86 Aligned_cols=76 Identities=21% Similarity=0.263 Sum_probs=67.2
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+.+....++||+..++|+|+ ..|++||++|++++..++ ++ .+.+++||++++|+|..|...|.+++++.++.
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~----g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~ 171 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD----GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLD 171 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET----TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC----CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 568888999999999999998 589999999999884443 34 68999999999999999999999999999988
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
+.+
T Consensus 172 v~d 174 (354)
T 2d40_A 172 GLD 174 (354)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 72
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.12 E-value=2.2e-10 Score=86.78 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=60.7
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+++..++++||...++| ....|++||++|++++.+. ++ .+.|++||+++||+|..|.+.|.+ +++.++.
T Consensus 39 ~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~-----g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~ 108 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTD-----GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAY 108 (119)
T ss_dssp CCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEE
T ss_pred CEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEE
Confidence 568888999999876555 4679999999999999882 34 689999999999999999998875 6777777
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
+..
T Consensus 109 v~~ 111 (119)
T 3lwc_A 109 VTY 111 (119)
T ss_dssp EEE
T ss_pred EEC
Confidence 664
No 73
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.11 E-value=3.8e-10 Score=100.45 Aligned_cols=89 Identities=17% Similarity=0.022 Sum_probs=73.6
Q ss_pred CCceEEEeeec-cCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEE
Q 047141 71 LGSRVTPVTVA-QIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVF 149 (215)
Q Consensus 71 ~g~~v~~~~~~-~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~ 149 (215)
.|+.+..++.. ..+.+.+++.+ ...++||+..++|||+. .|+.||++|++++.+. ++ +..+++||++++
T Consensus 249 ~G~~~~~~np~t~~~~~~ti~~~--~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~-----~~--~~~~~~GD~~~v 318 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSMGAF--LQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG-----NE--TFSFSAKDIFVV 318 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSCEEE--EEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET-----TE--EEEEETTCEEEE
T ss_pred CCeEEEEeCCCcCCCCCCcceeE--EEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC-----CE--EEEEcCCCEEEE
Confidence 46677877744 57777776555 45799999999999996 5999999999999982 34 789999999999
Q ss_pred cCCCeEEEEeCCCCcEEEEEEE
Q 047141 150 PVGLIHFQRNVGHGNAFSISGL 171 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~i~~~ 171 (215)
|++..|++.|. +++.++++.
T Consensus 319 P~~~~H~~~n~--e~~~l~~~~ 338 (354)
T 2d40_A 319 PTWHGVSFQTT--QDSVLFSFS 338 (354)
T ss_dssp CTTCCEEEEEE--EEEEEEEEE
T ss_pred CCCCeEEEEeC--CCEEEEEEc
Confidence 99999999994 778887763
No 74
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.11 E-value=5.7e-10 Score=99.04 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=63.2
Q ss_pred EEEEEEEEcCCcc-cC--CccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 91 IALARIDYAPWGV-VP--PHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 91 vs~~~~~l~pgg~-~p--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
+.+. ..+.|++. .+ +|||++..|++||++|++++.+.+.+ ++...+.|++||++++|+|.+|.+.|.++++ ++
T Consensus 48 ~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~--g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~ 123 (350)
T 1juh_A 48 FTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN--ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EM 123 (350)
T ss_dssp CEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT--SCCEEEEEETTCEEEECTTEEEEEEECSTTE-EE
T ss_pred EEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC--CceEEEEECCCCEEEECCCCcEEEEeCCCCC-EE
Confidence 4555 44555554 55 89999889999999999999987633 2223789999999999999999999998876 77
Q ss_pred EEEEcCC
Q 047141 168 ISGLSSQ 174 (215)
Q Consensus 168 i~~~~s~ 174 (215)
+.++...
T Consensus 124 l~v~~p~ 130 (350)
T 1juh_A 124 TGVIVPG 130 (350)
T ss_dssp EEEEESS
T ss_pred EEEEcCc
Confidence 7777543
No 75
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.11 E-value=2e-10 Score=96.78 Aligned_cols=73 Identities=19% Similarity=0.169 Sum_probs=64.8
Q ss_pred EEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE-EcCCCeEEEEeCCCCcEEEEEE
Q 047141 92 ALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV-FPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 92 s~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v-~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
.+.+..++||...++|||+ ..|++||++|++++.+. ++ ...|++||.++ +|+|..|...|.++++++++.+
T Consensus 35 ~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVG-----DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEET-----TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 5677789999999999999 69999999999999872 34 68999999885 9999999999999999999887
Q ss_pred Ec
Q 047141 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
..
T Consensus 107 ~r 108 (243)
T 3h7j_A 107 KR 108 (243)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 76
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.10 E-value=2.8e-10 Score=81.90 Aligned_cols=70 Identities=26% Similarity=0.479 Sum_probs=54.6
Q ss_pred CcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 87 NTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 87 ~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
++..+.+.++. +..++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ ++.
T Consensus 29 ~~~~~~~~~~~----~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~ 95 (102)
T 3d82_A 29 NDYQFKLVKVE----GEFVWHEHADTDEVFIVMEGTLQIAFR-----DQ--NITLQAGEMYVIPKGVEHKPMAKE--ECK 95 (102)
T ss_dssp TTEEEEEEEEE----EECCCBCCTTCCEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTCCBEEEEEE--EEE
T ss_pred CCCEEEEEEEC----CCCCceeCCCCcEEEEEEeCEEEEEEC-----CE--EEEEcCCCEEEECCCCeEeeEcCC--CCE
Confidence 44445555543 458999999669999999999999773 33 689999999999999999999973 455
Q ss_pred EEE
Q 047141 167 SIS 169 (215)
Q Consensus 167 ~i~ 169 (215)
++.
T Consensus 96 ~l~ 98 (102)
T 3d82_A 96 IMI 98 (102)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 77
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.10 E-value=2e-10 Score=84.17 Aligned_cols=69 Identities=19% Similarity=0.223 Sum_probs=53.5
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
..++.+.||. .++|+|+...|++||++|++++.+.+ ++ .+.+++||++++|+|..|...|. +++.++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD----GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT----SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC----Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 3455667776 46999996699999999999998732 14 68999999999999999999995 45666544
No 78
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.09 E-value=7.8e-10 Score=93.47 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=67.8
Q ss_pred cccEEEEEEEEcCCcccCC-ccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 88 TLGIALARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
+..+.+.+++++||+..+. |.|. ..|.+||++|++++.+. ++ .+.|++||+++++.+..|+++|.|+++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~-----~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~ 233 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLE-----EN--YYPVTAGDIIWMGAHCPQWYGALGRNWSK 233 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEEC-----CE--EEEcCCCCEEEECCCCCEEEEcCCCCCEE
Confidence 5678999999999999887 5565 69999999999999872 44 68999999999999999999999999999
Q ss_pred EEEEEc
Q 047141 167 SISGLS 172 (215)
Q Consensus 167 ~i~~~~ 172 (215)
++..-+
T Consensus 234 yl~~kd 239 (246)
T 1sfn_A 234 YLLYKD 239 (246)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 988754
No 79
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.09 E-value=8.1e-10 Score=96.07 Aligned_cols=74 Identities=20% Similarity=0.224 Sum_probs=62.5
Q ss_pred EEEEEEcC-CcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 047141 93 LARIDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGL 171 (215)
Q Consensus 93 ~~~~~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~ 171 (215)
...+.+.| |...++|||+++.|++||++|++++.+. ++ .+.|++||++++|+|..|++.|.++ ++.++.++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~-----~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~ 290 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD-----GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVL 290 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEE
Confidence 34455656 5678899999679999999999999882 34 7899999999999999999999998 89999988
Q ss_pred cCC
Q 047141 172 SSQ 174 (215)
Q Consensus 172 ~s~ 174 (215)
+..
T Consensus 291 ~~~ 293 (337)
T 1y3t_A 291 VPG 293 (337)
T ss_dssp ESS
T ss_pred cCc
Confidence 654
No 80
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.09 E-value=2.8e-10 Score=98.12 Aligned_cols=77 Identities=21% Similarity=0.175 Sum_probs=67.0
Q ss_pred cccEEEEEEEEcCCccc--CCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 047141 88 TLGIALARIDYAPWGVV--PPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNA 165 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~--ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a 165 (215)
+..+.+.+++++||+.. +.|.|+ ..|++||++|++++.+. ++ .+.|++||.++||+|..|.++|.+++++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~-----g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~ 136 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQ-----GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHT 136 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEES-----SC--EEEECTTEEEEECTTCCEEEECCSSSCE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEECCCCCE
Confidence 34578899999999876 567787 69999999999999883 33 6899999999999999999999999999
Q ss_pred EEEEEEc
Q 047141 166 FSISGLS 172 (215)
Q Consensus 166 ~~i~~~~ 172 (215)
+++++..
T Consensus 137 ~~l~v~~ 143 (278)
T 1sq4_A 137 RFHWIRK 143 (278)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9998874
No 81
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.07 E-value=8.1e-10 Score=82.45 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=58.0
Q ss_pred cEEEEEEEEcCCcccCC---ccCCCCcEEEEEEEcEEEEEEEecCCCCceEE--EEecCCcEEEEcCCCeEEEEeCCCC-
Q 047141 90 GIALARIDYAPWGVVPP---HVHPRATEILTVIEGSLEVGFVTSNPDNRLIS--KVLQKGDVFVFPVGLIHFQRNVGHG- 163 (215)
Q Consensus 90 gvs~~~~~l~pgg~~pp---H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~--~~L~~GDv~v~P~G~~H~~~N~g~~- 163 (215)
++.+.++. .+|...++ |.|+ ..|++||++|++++.+. ++ . ..|++||.++||+|..|...|.+++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~-----~~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~ 100 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECE-----GD--TAPRVMRPGDWLHVPAHCRHRVAWTDGGE 100 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEET-----TC--SSCEEECTTEEEEECTTCCEEEEEECSSS
T ss_pred CEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEEC-----CE--EEEEEECCCCEEEECCCCcEEEEeCCCCC
Confidence 55677765 45555554 4455 69999999999999883 23 4 7899999999999999999999976
Q ss_pred cEEEEEEEc
Q 047141 164 NAFSISGLS 172 (215)
Q Consensus 164 ~a~~i~~~~ 172 (215)
++.+++++.
T Consensus 101 ~~~~l~v~~ 109 (112)
T 2opk_A 101 PTVWLAVHC 109 (112)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 677777764
No 82
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.06 E-value=3.9e-10 Score=95.84 Aligned_cols=77 Identities=13% Similarity=0.054 Sum_probs=65.9
Q ss_pred ccEEEEEEEEcCCcccCCccC-CCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVH-PRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~H-p~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
..+.+.+++++||+....|.| +...|++||++|++++.+. ++ .+.|++||.++||++..|.+.|.+++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~ 129 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE-----GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQI 129 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET-----TE--EEEEETTEEEEECTTCCCEEEECSSSCEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 346788899999998766554 5568899999999999872 34 689999999999999999999999999999
Q ss_pred EEEEc
Q 047141 168 ISGLS 172 (215)
Q Consensus 168 i~~~~ 172 (215)
+++..
T Consensus 130 l~v~~ 134 (261)
T 1rc6_A 130 FLYKR 134 (261)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 83
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.04 E-value=4.3e-10 Score=86.91 Aligned_cols=71 Identities=18% Similarity=0.093 Sum_probs=59.4
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+.+..++++|| ..|||....|++||++|++++.+. ++ .+.|++||+++||+|..|.+.| .+++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~-----g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~ 123 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE-----GE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLY 123 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEE--EEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC-----CE--EEEECCCcEEEECCCCEEEEEe--CCCEEEEE
Confidence 567888899999 356776679999999999999873 34 6799999999999999999987 46788887
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
+..
T Consensus 124 v~~ 126 (133)
T 2pyt_A 124 VAW 126 (133)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 84
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.04 E-value=7e-10 Score=92.27 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=67.4
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
...+.+..+.+.||...|.|.|+ .+|+.||++|++++.+.+ ++ .+.+++||++++|+|..|.++ .+++|+..
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~----g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePlla 200 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN----AP--DLMLEPGQTRFHPANAPHAMT-TLTDPILT 200 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT----SC--CEEECTTCEEEECTTCCEEEE-CCSSCEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC----CC--EEecCCCCEEEcCCCCceeEE-ECCccEEE
Confidence 34578999999999999999999 699999999999998842 23 689999999999999999997 58899988
Q ss_pred EEEEc
Q 047141 168 ISGLS 172 (215)
Q Consensus 168 i~~~~ 172 (215)
+++..
T Consensus 201 lwvW~ 205 (217)
T 4b29_A 201 LVLWR 205 (217)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87774
No 85
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.03 E-value=8.4e-10 Score=92.05 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=62.8
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+++..+.++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||.+++|+|..|+..|. .+++.++.
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVD-----GK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEET-----TE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 467889999999999999999 59999999999999872 34 78999999999999999999993 46676666
Q ss_pred EE
Q 047141 170 GL 171 (215)
Q Consensus 170 ~~ 171 (215)
++
T Consensus 223 ~~ 224 (227)
T 3rns_A 223 IL 224 (227)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 86
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.03 E-value=1.3e-09 Score=93.64 Aligned_cols=106 Identities=13% Similarity=0.059 Sum_probs=79.3
Q ss_pred CCCCccchhhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEE
Q 047141 48 PKLAQADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGF 127 (215)
Q Consensus 48 ~~~~~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~ 127 (215)
.+.++.+|++.+.+ |+ -.|..++.+-.... +-.+.+.+++++||+..+.|.|. ++|++||++|++++.+
T Consensus 37 ~avI~~~~iv~s~l--Pg----~~~~~~~vL~sP~~----G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l 105 (266)
T 4e2q_A 37 HALITPESHVYSPL--PD----WTNTLGAYLITPAT----GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTN 105 (266)
T ss_dssp EEEECGGGCCCEEC--TT----SSSEEEEEEECGGG----TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC
T ss_pred eEEECccceEEeeC--CC----CcCEEEEEEcCCCC----CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEE
Confidence 35566688887754 21 23444555443332 23568899999999998888776 7999999999999988
Q ss_pred EecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 047141 128 VTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLS 172 (215)
Q Consensus 128 ~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~ 172 (215)
.+ ++ .+.|++||.++||+|..|++.|. ++++++++..
T Consensus 106 ~~----g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 106 TS----SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp ------CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred CC----Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 41 23 58999999999999999999995 6888888753
No 87
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.01 E-value=7.7e-10 Score=94.77 Aligned_cols=77 Identities=13% Similarity=0.079 Sum_probs=65.4
Q ss_pred ccEEEEEEEEcCCcccCCcc-CCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 89 LGIALARIDYAPWGVVPPHV-HPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~-Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
..+.+.+++++||+....|. |+...|++||++|++++.+. ++ .+.|++||.++||++..|.+.|.+++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~ 132 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG-----QE--THELEAGGYAYFTPEMKMYLANAQEADTEV 132 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTSCCEEEESSSSCEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 34678889999998776554 45568999999999999873 33 689999999999999999999999999999
Q ss_pred EEEEc
Q 047141 168 ISGLS 172 (215)
Q Consensus 168 i~~~~ 172 (215)
+++..
T Consensus 133 l~v~~ 137 (274)
T 1sef_A 133 FLYKK 137 (274)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98873
No 88
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.01 E-value=1.4e-09 Score=86.47 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=58.7
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEE--cEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIE--GSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~--G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
.+++.++++ ++..++|||+...|++||++ |++++.+. ++ .+.+++||++++|+|..|.+.+ ++++
T Consensus 46 p~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id-----ge--~~~l~~GD~v~IPpg~~H~i~g----~l~~ 112 (157)
T 4h7l_A 46 SVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN-----GQ--SYPLTKLLAISIPPLVRHRIVG----EATI 112 (157)
T ss_dssp SCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET-----TE--EEECCTTEEEEECTTCCEEEES----CEEE
T ss_pred cEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC-----CE--EEEeCCCCEEEECCCCeEeeEC----CEEE
Confidence 345565555 44578999997789999999 99999882 44 6899999999999999999972 7999
Q ss_pred EEEEcCC
Q 047141 168 ISGLSSQ 174 (215)
Q Consensus 168 i~~~~s~ 174 (215)
+++++..
T Consensus 113 L~I~~Pp 119 (157)
T 4h7l_A 113 INIVSPP 119 (157)
T ss_dssp EEEEESS
T ss_pred EEEECCC
Confidence 9988643
No 89
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.99 E-value=2e-09 Score=89.78 Aligned_cols=74 Identities=12% Similarity=0.012 Sum_probs=64.8
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
+..+.++.++||...++|.|| ..|++||++|++++.+. ++ ...|++||.+++|+|.+|...|. ++++++.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~ 105 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIE-----NN--KKTISNGDFLEITANHNYSIEAR--DNLKLIE 105 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEES-----SC--EEEEETTEEEEECSSCCEEEEES--SSEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEEC--CCcEEEE
Confidence 568899999999999999999 59999999999999883 23 68999999999999999999985 5788888
Q ss_pred EEcC
Q 047141 170 GLSS 173 (215)
Q Consensus 170 ~~~s 173 (215)
++..
T Consensus 106 i~~~ 109 (227)
T 3rns_A 106 IGEK 109 (227)
T ss_dssp EEEC
T ss_pred EEee
Confidence 7543
No 90
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.99 E-value=2.2e-09 Score=96.89 Aligned_cols=78 Identities=17% Similarity=0.092 Sum_probs=68.6
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEe-CCCCcEE
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRN-VGHGNAF 166 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N-~g~~~a~ 166 (215)
+-.+.+....+.||+..++|.|.. .|+.||++|++.+..++ ++ ...+++||++++|.|..|...| .|+++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v~----G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~ 192 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIVD----GH--KVELGANDFVLTPNGTWHEHGILESGTECI 192 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEET----TE--EEEECTTCEEEECTTCCEEEEECTTCCCEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEEC----CE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEE
Confidence 446788999999999999999985 79999999999764443 44 6899999999999999999999 9999999
Q ss_pred EEEEEc
Q 047141 167 SISGLS 172 (215)
Q Consensus 167 ~i~~~~ 172 (215)
++++.+
T Consensus 193 ~l~v~d 198 (394)
T 3bu7_A 193 WQDGLD 198 (394)
T ss_dssp EEEEEC
T ss_pred EEEccc
Confidence 999774
No 91
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.98 E-value=3.8e-09 Score=90.97 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=72.3
Q ss_pred CCCCCcccEEEEEEEEcCCcccCC-ccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC
Q 047141 83 IPGLNTLGIALARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG 161 (215)
Q Consensus 83 ~P~l~~lgvs~~~~~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g 161 (215)
.|.-....+.+.+++++||+..+. |.|. .+|.+||++|++.+.+. ++ .+.|++||+++++.|..|+++|.|
T Consensus 183 ~p~~~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~-----~~--~~~v~~GD~~~~~~~~~h~~~n~g 254 (278)
T 1sq4_A 183 DMSDMRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLN-----QD--WVEVEAGDFMWLRAFCPQACYSGG 254 (278)
T ss_dssp CTTCTTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEET-----TE--EEEEETTCEEEEEESCCEEEECCS
T ss_pred cCCCcCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCCEEEEcCC
Confidence 344445678999999999999987 4555 58999999999999772 34 789999999999999999999999
Q ss_pred CCcEEEEEEEcC-CCC
Q 047141 162 HGNAFSISGLSS-QNP 176 (215)
Q Consensus 162 ~~~a~~i~~~~s-~~p 176 (215)
+++++++.+.+- .+|
T Consensus 255 ~~~~~yl~~~d~nr~~ 270 (278)
T 1sq4_A 255 PGRFRYLLYKDVNRHM 270 (278)
T ss_dssp SSCEEEEEEEECSSCC
T ss_pred CCCEEEEEEEEcCCCc
Confidence 999999998863 344
No 92
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.97 E-value=1.2e-09 Score=97.70 Aligned_cols=78 Identities=22% Similarity=0.189 Sum_probs=68.0
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
-.+.+....+.||+..++|.|. .+|+.||++|++.+..++ ++ ...+++||++++|+|..|...|.|+++++++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vd----G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l 173 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVN----GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWI 173 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEET----TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEEC----CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEE
Confidence 4578888899999999999998 589999999999533333 34 7899999999999999999999999999999
Q ss_pred EEEcC
Q 047141 169 SGLSS 173 (215)
Q Consensus 169 ~~~~s 173 (215)
.+++.
T Consensus 174 ~v~D~ 178 (368)
T 3nw4_A 174 DGLDI 178 (368)
T ss_dssp EEECH
T ss_pred Eecch
Confidence 98753
No 93
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.95 E-value=1.1e-08 Score=83.83 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=66.5
Q ss_pred EEEEEEEcCCc----------ccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC
Q 047141 92 ALARIDYAPWG----------VVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG 161 (215)
Q Consensus 92 s~~~~~l~pgg----------~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g 161 (215)
+...+.+.|+. ..++|+|+. .|+.||++|++++.+.+.+ ++.+...+++||++++|+|+.|+..+..
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~--d~~~~i~v~~GDlIiIPaG~~H~f~~~~ 151 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKE--DKWIRISMEKGDMITLPAGIYHRFTLDE 151 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTT--SCEEEEEEETTEEEEECTTCCEEEEECT
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCC--CeEEEEEECCCCEEEECcCCcCCcccCC
Confidence 45556677775 248999996 9999999999999987642 4555679999999999999999999877
Q ss_pred CCcEEEEEEEcCCCCcee
Q 047141 162 HGNAFSISGLSSQNPGVI 179 (215)
Q Consensus 162 ~~~a~~i~~~~s~~pg~~ 179 (215)
+.....+-+|..+ ||..
T Consensus 152 ~~~~~airlF~~~-~~W~ 168 (191)
T 1vr3_A 152 KNYVKAMRLFVGE-PVWT 168 (191)
T ss_dssp TCCEEEEEEESSS-CCCC
T ss_pred CCCEEEEEEECCC-CCcc
Confidence 7778888888644 5543
No 94
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.95 E-value=2.2e-09 Score=84.89 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=59.1
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+++..++++ ++ +.|||...+|+.||++|++++.+ + ++ .+.+++||+++||+|..|.+.|. +++++++
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i-~----g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~ 132 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIII-D----GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIY 132 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEE-T----TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEE-C----CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEE
Confidence 4577777776 43 35677778999999999999987 2 44 78999999999999999999997 7888888
Q ss_pred EEcCC
Q 047141 170 GLSSQ 174 (215)
Q Consensus 170 ~~~s~ 174 (215)
+....
T Consensus 133 V~~P~ 137 (151)
T 4axo_A 133 VTYPA 137 (151)
T ss_dssp EEECS
T ss_pred EECCC
Confidence 87543
No 95
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.94 E-value=8.3e-09 Score=93.08 Aligned_cols=91 Identities=18% Similarity=0.080 Sum_probs=71.9
Q ss_pred CceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcC
Q 047141 72 GSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPV 151 (215)
Q Consensus 72 g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~ 151 (215)
+..+..++... .+-....+.+....++||+..++|.|. ..|++||++|++++.+. ++ ...+++||++++|+
T Consensus 276 ~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~-----ge--~~~~~~GD~~~iP~ 346 (394)
T 3bu7_A 276 GLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVG-----GK--RFDWSEHDIFCVPA 346 (394)
T ss_dssp BEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEET-----TE--EEEECTTCEEEECT
T ss_pred ceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEEC-----CE--EEEEeCCCEEEECC
Confidence 44455555442 121223457788889999999999999 58999999999988772 34 78999999999999
Q ss_pred CCeEEEEeCC-CCcEEEEEEE
Q 047141 152 GLIHFQRNVG-HGNAFSISGL 171 (215)
Q Consensus 152 G~~H~~~N~g-~~~a~~i~~~ 171 (215)
|..|.+.|.| ++++.++++.
T Consensus 347 g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 347 WTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp TCCEEEEECCSSCCEEEEEEE
T ss_pred CCeEEeEeCCCCCCeEEEEee
Confidence 9999999998 7999988875
No 96
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.94 E-value=7.7e-09 Score=75.28 Aligned_cols=72 Identities=17% Similarity=0.174 Sum_probs=63.4
Q ss_pred EEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcC-CCCceeeec---chhccCCCCCCHHHHHHHcCCCHHHHHHhh
Q 047141 137 ISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSS-QNPGVITIA---NTVFGSNPAIADDLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 137 ~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s-~~pg~~~~~---~~~f~~~p~~p~~vla~af~~~~~~v~~lk 212 (215)
+...|++||+++||+|.+-...+.. ...++++-++ +++....++ ++++.. +|.++|+.||+++.+++++|+
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHHT
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHHH
Confidence 4678999999999999999998874 4999888554 488888885 589998 999999999999999999997
Q ss_pred h
Q 047141 213 T 213 (215)
Q Consensus 213 ~ 213 (215)
.
T Consensus 81 ~ 81 (93)
T 1dgw_Y 81 E 81 (93)
T ss_dssp T
T ss_pred h
Confidence 5
No 97
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.94 E-value=6e-09 Score=89.43 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=67.3
Q ss_pred cccEEEEEEEEcCCcccCC-ccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 88 TLGIALARIDYAPWGVVPP-HVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~pp-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
...+.+.+++++||+..+. |+|. .+|.+||++|++.+.+. ++ .+.+++||+++++++..|+++|.|+++++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~-----~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~ 254 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLG-----DN--WYPVQAGDVIWMAPFVPQWYAALGKTRSR 254 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEEC-----CE--EEEecCCCEEEECCCCcEEEEeCCCCCEE
Confidence 5578899999999999986 7776 58999999999999872 34 78999999999999999999999999999
Q ss_pred EEEEE
Q 047141 167 SISGL 171 (215)
Q Consensus 167 ~i~~~ 171 (215)
++.--
T Consensus 255 yl~yk 259 (266)
T 4e2q_A 255 YLLYK 259 (266)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98643
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.81 E-value=8.8e-09 Score=75.85 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=50.4
Q ss_pred EEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 95 RIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 95 ~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
...+.||.. ++| |+ ..|++||++|++++.+.+ ++ ...|++||+++||+|..|.+.|.++....+
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTED----GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETT----CC--EEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECC----CC--EEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 456778764 356 76 699999999999998831 23 689999999999999999999976554433
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.73 E-value=3.6e-08 Score=78.41 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=68.2
Q ss_pred CCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEc
Q 047141 71 LGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFP 150 (215)
Q Consensus 71 ~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P 150 (215)
.|..++.+....- .+..+.+++++||+..+.|.|+. .|.+||++|++.+ +++ + ..+++||.++.|
T Consensus 27 ~Gv~~~~L~~d~~-----~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~e~--~----~~~~~Gd~~~~P 91 (159)
T 3ebr_A 27 NDVMVKYFKIDPV-----RGETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---KEH--D----WVAHAGSVVYET 91 (159)
T ss_dssp SSSEEEEEEEETT-----TTEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---TTS--S----CCBCTTCEEEEC
T ss_pred CCEEEEEeeEcCC-----CCeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---eCC--C----eEECCCeEEEEC
Confidence 4566666543211 24678889999999999999995 8889999999885 222 2 379999999999
Q ss_pred CCCeEEEEeC--CCCcEEEEEEEc
Q 047141 151 VGLIHFQRNV--GHGNAFSISGLS 172 (215)
Q Consensus 151 ~G~~H~~~N~--g~~~a~~i~~~~ 172 (215)
.|..|...+. ++++++++.+.+
T Consensus 92 ~g~~H~~~~~~~~~e~~~~~~~~~ 115 (159)
T 3ebr_A 92 ASTRHTPQSAYAEGPDIITFNIVA 115 (159)
T ss_dssp SSEEECEEESSSSSSCEEEEEEEE
T ss_pred CCCcceeEeCCCCCCCEEEEEEec
Confidence 9999999998 778998887654
No 100
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.72 E-value=1.9e-08 Score=76.74 Aligned_cols=68 Identities=15% Similarity=0.150 Sum_probs=54.7
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNA 165 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a 165 (215)
.++....++.||... .|+|. ..|++||++|++++.+. + ++ ...|++||++++|+|..|.+.|.+....
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~--~--g~--~~~l~~GD~~~ip~g~~h~~~~~~~~rK 115 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDP--D--GT--VHAVKAGDAFIMPEGYTGRWEVDRHVKK 115 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECT--T--CC--EEEEETTCEEEECTTCCCEEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEEC--C--Ce--EEEECCCCEEEECCCCeEEEEECCceeE
Confidence 467888889998754 46665 38999999999999762 2 33 6899999999999999999999865443
No 101
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.72 E-value=7.9e-09 Score=83.82 Aligned_cols=70 Identities=17% Similarity=0.211 Sum_probs=56.5
Q ss_pred cCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCce
Q 047141 104 VPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGV 178 (215)
Q Consensus 104 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~ 178 (215)
.++|+|+. .|+.||++|++++.+.. + ++.+...+++||++++|+|+.|+..+..+.....+-+|... ||.
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~~-~--d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLHI-G--DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEEC-S--SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECCh-heEEEEEcceEEEEEEe-C--CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 57999995 99999999999998752 2 45556779999999999999999887666667777777544 554
No 102
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.72 E-value=3.1e-08 Score=81.09 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=60.3
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
..+..+.++||+..|.|+|+ ..|+.||++|++. ++ ..++.+||.+++|.|..|...+.+++.++++++
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de-------~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DE-------TDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CS-------SSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CC-------cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 35678889999999999998 6999999999965 32 247999999999999999999987889999887
Q ss_pred Ec
Q 047141 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
.+
T Consensus 193 ~d 194 (195)
T 2q1z_B 193 TD 194 (195)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 103
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.71 E-value=4.1e-08 Score=82.84 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=60.9
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+.+.+++++||+....|+ ..|++||++|++++.+. ++ .+.|++||.++||+|..|.+.|. +++.+++
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~ 116 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG-----GE--TRTLREYDYVYLPAGEKHMLTAK--TDARVSV 116 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS-----SC--EEEECTTEEEEECTTCCCEEEEE--EEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeC--CCEEEEE
Confidence 4678889999999877774 68999999999999873 33 68999999999999999999998 7788877
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
+..
T Consensus 117 v~~ 119 (246)
T 1sfn_A 117 FEK 119 (246)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 104
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.69 E-value=1.4e-07 Score=75.79 Aligned_cols=69 Identities=17% Similarity=0.222 Sum_probs=55.6
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG 161 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g 161 (215)
+..+.++. .-.|++...+|.|+ ..|++||++|++++.+.+. ++.....|++||++++|+|+.|.-...+
T Consensus 33 d~~~~V~~-v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~---g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 33 DSDFIVTV-VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD---GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SCSEEEEE-ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET---TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CCcEEEEE-EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC---CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 33344443 34678889999887 6999999999999999874 4455799999999999999999987654
No 105
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.63 E-value=2.8e-08 Score=77.60 Aligned_cols=91 Identities=13% Similarity=-0.039 Sum_probs=64.6
Q ss_pred CCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEc
Q 047141 71 LGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFP 150 (215)
Q Consensus 71 ~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P 150 (215)
.|...+.+.... . .|-.+.+++++||+..+.|+|+. .|.+||++|+++.... .......+++||.+++|
T Consensus 29 ~Gv~~~~L~~~~--~---~g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~g-----~~~~~~~~~~Gd~~~~p 97 (145)
T 2o1q_A 29 GGIRWKLLHVSP--E---MGSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRGG-----KAAGGDTAIAPGYGYES 97 (145)
T ss_dssp SCCEEEEEEEET--T---TTEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETTC-----GGGTSEEEESSEEEEEC
T ss_pred CCcEEEEeeECC--C---cccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcCC-----CEecceEeCCCEEEEEC
Confidence 455555553322 1 23357788999999999999995 6779999999995321 22113789999999999
Q ss_pred CCCeEE-EEeCCCCcEEEEEEEcCC
Q 047141 151 VGLIHF-QRNVGHGNAFSISGLSSQ 174 (215)
Q Consensus 151 ~G~~H~-~~N~g~~~a~~i~~~~s~ 174 (215)
+|..|. ..+ .+.++++.+++..
T Consensus 98 ~g~~H~p~~~--~e~~~~l~~~~gp 120 (145)
T 2o1q_A 98 ANARHDKTEF--PVASEFYMSFLGP 120 (145)
T ss_dssp TTCEESCCEE--EEEEEEEEEEESC
T ss_pred cCCccCCeEC--CCCeEEEEEECCc
Confidence 999998 433 3557777777544
No 106
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.62 E-value=6.1e-07 Score=72.16 Aligned_cols=86 Identities=21% Similarity=0.228 Sum_probs=72.2
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCc---eEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNR---LISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k---~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
+.++..+...||...++|-|.++..++.|++|+++..+.... +++ .....+++||++++|++.+|.+.|.++++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~-~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRST-GEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEEC-SSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecC-CCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 457888899999999999999878899999999998765432 121 1367899999999999999999999999999
Q ss_pred EEEEEcCCCC
Q 047141 167 SISGLSSQNP 176 (215)
Q Consensus 167 ~i~~~~s~~p 176 (215)
-+-+++....
T Consensus 147 SlHvY~pp~~ 156 (171)
T 3eqe_A 147 SLHVYSPPLE 156 (171)
T ss_dssp EEEEEESCCC
T ss_pred EEEEeCCCcc
Confidence 9999976654
No 107
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.61 E-value=8.3e-08 Score=76.80 Aligned_cols=74 Identities=26% Similarity=0.270 Sum_probs=59.9
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC--CCcEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG--HGNAFS 167 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g--~~~a~~ 167 (215)
|..+..+.++||+..++|+|+ ..|.+||++|++..+ . .. .+.+++||.++.|.|..|...+.. +++++.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~---~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~ 112 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---E---YP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEV 112 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---T---CT--TSCEETTEEEEECTTCEECEECCTTCSSCEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---C---Cc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEE
Confidence 456888999999999999999 589999999999862 1 21 256899999999999999998864 347866
Q ss_pred EEEEc
Q 047141 168 ISGLS 172 (215)
Q Consensus 168 i~~~~ 172 (215)
+.+.+
T Consensus 113 l~v~~ 117 (165)
T 3cjx_A 113 IFMLS 117 (165)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
No 108
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.59 E-value=2.4e-07 Score=82.10 Aligned_cols=80 Identities=20% Similarity=0.133 Sum_probs=62.9
Q ss_pred CCCcccEEEEEEEEcC---CcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC
Q 047141 85 GLNTLGIALARIDYAP---WGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG 161 (215)
Q Consensus 85 ~l~~lgvs~~~~~l~p---gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g 161 (215)
..+....++.++++.+ |+..+.|.|+ ..|++||++|++++.+.+ .+ .+.|++||++++|+|.+|.+.|.+
T Consensus 243 ~~~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g----~~--~~~l~~Gd~~~iPag~~h~~~~~~ 315 (350)
T 1juh_A 243 QAQDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGD----YA--ATELGSGDVAFIPGGVEFKYYSEA 315 (350)
T ss_dssp HHGGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETT----SC--CEEECTTCEEEECTTCCEEEEESS
T ss_pred cCceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECC----eE--EEEeCCCCEEEECCCCCEEEEecC
Confidence 3344456888888877 4468889898 599999999999999843 13 689999999999999999999986
Q ss_pred CCcEEEEEEEc
Q 047141 162 HGNAFSISGLS 172 (215)
Q Consensus 162 ~~~a~~i~~~~ 172 (215)
+. ..++.+.+
T Consensus 316 ~~-~~~l~~~~ 325 (350)
T 1juh_A 316 YF-SKVLFVSS 325 (350)
T ss_dssp SS-EEEEEEEE
T ss_pred Ce-EEEEEEec
Confidence 54 55555544
No 109
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.57 E-value=3.2e-07 Score=74.02 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=61.0
Q ss_pred EEEEEEEEcCCcccCCccCCC------CcEEEEEEEcEEEEEEEecCCCCce------------------EEEEecCCcE
Q 047141 91 IALARIDYAPWGVVPPHVHPR------ATEILTVIEGSLEVGFVTSNPDNRL------------------ISKVLQKGDV 146 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~------a~Ei~yVl~G~~~~~~~~~~~~~k~------------------~~~~L~~GDv 146 (215)
...-++.+.||...|.|.|+. -.|-++|+.|++++.+.+ .+. -...|++||.
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g----~~~~~~~v~v~dg~~~~~~a~~~i~L~pGes 128 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEG----EKTPLPKVLPPQEDREHYTVWHEIELEPGGQ 128 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESS----SCCSSCSCCCCGGGGGGCCCCEEEEECTTCE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECC----ccccCcceeccCCceeeecCCcEEEECCCCE
Confidence 566778899999999999998 889999999999987732 111 1359999999
Q ss_pred EEEcCCCeEEEEeCCCCcEEEEEEEcCC
Q 047141 147 FVFPVGLIHFQRNVGHGNAFSISGLSSQ 174 (215)
Q Consensus 147 ~v~P~G~~H~~~N~g~~~a~~i~~~~s~ 174 (215)
+.+|+|..|+++| +.+. +++.-+++.
T Consensus 129 vtIppg~~H~f~a-geeg-vli~EvSt~ 154 (175)
T 2y0o_A 129 YTIPPNTKHWFQA-GEEG-AVVTEMSST 154 (175)
T ss_dssp EEECTTCCEEEEE-EEEE-EEEEEEEEC
T ss_pred EEECCCCcEEEEe-CCCC-EEEEEEeCC
Confidence 9999999999999 4444 444444433
No 110
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.49 E-value=8.9e-07 Score=77.46 Aligned_cols=84 Identities=23% Similarity=0.264 Sum_probs=66.3
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecC-C---cEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQK-G---DVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~-G---Dv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
.......||....+|||.+..|.++|++|++.+.+-+.. .++ ...+.. | +++++|+|..|.+.|.|+++++++
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVN-DDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETT-CCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCC-CCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 344567999999999999989999999999999876543 244 345555 6 999999999999999999999888
Q ss_pred EEEc----CCCCcee
Q 047141 169 SGLS----SQNPGVI 179 (215)
Q Consensus 169 ~~~~----s~~pg~~ 179 (215)
..-+ .++|.+.
T Consensus 351 ~~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 351 MWVNEMFDPNQPDTY 365 (369)
T ss_dssp EEESSCCCSSSCCCE
T ss_pred EecCcccCCCCCccc
Confidence 7654 3455543
No 111
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.47 E-value=1.2e-06 Score=70.24 Aligned_cols=62 Identities=19% Similarity=0.363 Sum_probs=50.4
Q ss_pred EcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC-CCCceEEEEecCCcEEEEcCCCeEEEEeC
Q 047141 98 YAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-PDNRLISKVLQKGDVFVFPVGLIHFQRNV 160 (215)
Q Consensus 98 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~k~~~~~L~~GDv~v~P~G~~H~~~N~ 160 (215)
-.|+....+|.|+ ..|++|+++|++.+.+.+.. .+.+.....|++||++++|+|+.|.-...
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 4566778999666 69999999999999998731 00145589999999999999999998665
No 112
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.44 E-value=2.7e-06 Score=70.34 Aligned_cols=83 Identities=18% Similarity=0.182 Sum_probs=68.4
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCce----EEEEecCCcEEEEcC--CCeEEEEeC-CC
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRL----ISKVLQKGDVFVFPV--GLIHFQRNV-GH 162 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~----~~~~L~~GDv~v~P~--G~~H~~~N~-g~ 162 (215)
++.+..+...||...++|-|.. ..+++|++|+++..+..-..+++. ...++++||+++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 3578888999999999999995 999999999999877542111211 157899999999999 999999999 68
Q ss_pred CcEEEEEEEcC
Q 047141 163 GNAFSISGLSS 173 (215)
Q Consensus 163 ~~a~~i~~~~s 173 (215)
++++.+-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988864
No 113
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.43 E-value=5.8e-07 Score=69.71 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=56.6
Q ss_pred EEEEEEEc----CCcccCCccCCCCcEEEEEEEcEEEEEEEecC-CCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEE
Q 047141 92 ALARIDYA----PWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-PDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAF 166 (215)
Q Consensus 92 s~~~~~l~----pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~ 166 (215)
.++...+. ++++..+|.|++..|+++|++|++++.+-+.. +..+.....|++|++++||+|+-|...... .+.
T Consensus 26 ~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--e~~ 103 (140)
T 3d0j_A 26 LVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK--DTK 103 (140)
T ss_dssp EEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT--TCE
T ss_pred EEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC--ceE
Confidence 44444443 34677889999999999999999999987421 001123689999999999999999987754 445
Q ss_pred EEEEE
Q 047141 167 SISGL 171 (215)
Q Consensus 167 ~i~~~ 171 (215)
++.+=
T Consensus 104 vLLiE 108 (140)
T 3d0j_A 104 MMYVQ 108 (140)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 114
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.41 E-value=1.7e-06 Score=77.26 Aligned_cols=87 Identities=17% Similarity=0.092 Sum_probs=68.6
Q ss_pred Cce-EEEeeecc-CCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEE
Q 047141 72 GSR-VTPVTVAQ-IPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVF 149 (215)
Q Consensus 72 g~~-v~~~~~~~-~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~ 149 (215)
|.. +..+|..+ -+.+.+++. ....+.||...++|-|. ++++++|++|++++.+. ++ ++..++||+|++
T Consensus 260 g~~~~~y~NP~tg~~~~pti~~--~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~-----~~--~~~w~~gD~fvv 329 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPTLRC--EFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMN-----GE--TTKLEKGDMFVV 329 (368)
T ss_dssp TEEEEECBCTTTSSBSSSSCEE--EEEEECTTCBCCCEEES-SCEEEEEEESCEEEEET-----TE--EEEECTTCEEEE
T ss_pred ceEEEEEeCCCCCCCcchhHHh--heEEECCCCccCCeecc-ccEEEEEEeCcEEEEEC-----CE--EEEecCCCEEEE
Confidence 555 56666432 344666544 44568999999999999 58999999999999883 34 689999999999
Q ss_pred cCCCeEEEEeCCCCcEEEEEE
Q 047141 150 PVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~i~~ 170 (215)
|++..|...|. +++.++++
T Consensus 330 P~w~~h~~~n~--~~a~Lf~~ 348 (368)
T 3nw4_A 330 PSWVPWSLQAE--TQFDLFRF 348 (368)
T ss_dssp CTTCCEEEEES--SSEEEEEE
T ss_pred CCCCcEEEEeC--CCEEEEEE
Confidence 99999999996 67877765
No 115
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.36 E-value=4.3e-06 Score=64.31 Aligned_cols=71 Identities=20% Similarity=0.132 Sum_probs=54.0
Q ss_pred EEEEEEcCCcc-----cCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCC-CcEE
Q 047141 93 LARIDYAPWGV-----VPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGH-GNAF 166 (215)
Q Consensus 93 ~~~~~l~pgg~-----~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~-~~a~ 166 (215)
..+-...|+.. ..||.|+ ..|++||++|++++.+. ++ .+.+++||++++|+|.+|...+.++ ++..
T Consensus 15 ~G~~~~~~~~~~~~~~~~p~~h~-~~~i~~v~~G~~~~~i~-----~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~ 86 (164)
T 2arc_A 15 AGLTPIEANGYLDFFIDRPLGMK-GYILNLTIRGQGVVKNQ-----GR--EFVCRPGDILLFPPGEIHHYGRHPEAREWY 86 (164)
T ss_dssp EEEEEEETTSTTCSCEEETTCCS-SEEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECTTSSEEE
T ss_pred hcceeeccCCchhhhhccccCCC-ceEEEEEEEeEEEEEEC-----CE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEE
Confidence 34444555433 2489998 59999999999999872 34 7899999999999999999888763 6666
Q ss_pred EEEEE
Q 047141 167 SISGL 171 (215)
Q Consensus 167 ~i~~~ 171 (215)
.+++.
T Consensus 87 ~~~i~ 91 (164)
T 2arc_A 87 HQWVY 91 (164)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66544
No 116
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.29 E-value=4e-06 Score=71.89 Aligned_cols=73 Identities=15% Similarity=0.280 Sum_probs=57.5
Q ss_pred cCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCc
Q 047141 99 APWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQNPG 177 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg 177 (215)
.|+....+| |....|++|+++|.+.+.+.+. ++.....|++||++++|+|+.|.-... +.++.+.+=....+|
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~---g~~~~V~i~eGemfllP~gv~HsP~r~--~et~gLviE~~R~~~ 111 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ---GKHRDVVIRQGEIFLLPARVPHSPQRF--ANTVGLVVERRRLET 111 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET---TEEEEEEECTTEEEEECTTCCEEEEEC--TTCEEEEEEECCCTT
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC---CceeeEEECCCeEEEeCCCCCcCCccc--CCeEEEEEeecCCCC
Confidence 556668999 9889999999999999999874 556689999999999999999998774 345555444333333
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.28 E-value=4.1e-06 Score=69.91 Aligned_cols=84 Identities=18% Similarity=0.195 Sum_probs=64.2
Q ss_pred CCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEc
Q 047141 71 LGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFP 150 (215)
Q Consensus 71 ~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P 150 (215)
.|...+.+.... . ..+.....+.++||+..|.|+|+ ..|.+||++|++. +. ...+.+||.++.|
T Consensus 27 ~Gv~~~~L~~~~--~--e~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-------~~~~~~Gd~~~~P 90 (223)
T 3o14_A 27 KGVERRMLDRIG--G--EVARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-------HGDYPAGTYVRNP 90 (223)
T ss_dssp TTEEEEEEEEES--S--SSCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-------TEEEETTEEEEEC
T ss_pred CCEEEEEeecCC--C--ccccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-------CeEECCCeEEEeC
Confidence 455555554332 1 12445677889999999999999 5899999999976 32 2579999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEc
Q 047141 151 VGLIHFQRNVGHGNAFSISGLS 172 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~i~~~~ 172 (215)
+|..|.... ++.|.++..+.
T Consensus 91 ~g~~H~p~a--~~gc~~~vk~~ 110 (223)
T 3o14_A 91 PTTSHVPGS--AEGCTIFVKLW 110 (223)
T ss_dssp TTCEECCEE--SSCEEEEEEES
T ss_pred CCCccccEe--CCCCEEEEEec
Confidence 999998876 57788887764
No 118
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.27 E-value=1e-06 Score=69.64 Aligned_cols=90 Identities=11% Similarity=-0.028 Sum_probs=64.6
Q ss_pred CCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEc
Q 047141 71 LGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFP 150 (215)
Q Consensus 71 ~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P 150 (215)
.|..++.+... | ..|-...+++++||+..++|+|+ ..|.+|||+|+...+..+ ......+++|+.++-|
T Consensus 31 ~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~Gd-----~~~~~~~~aGsYv~eP 99 (153)
T 3bal_A 31 GGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGGE-----QEGGSTAYAPSYGFES 99 (153)
T ss_dssp SCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTCG-----GGTSEEEESSEEEEEC
T ss_pred CCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCcc-----ccCccccCCCeEEEcC
Confidence 46666666322 2 24678899999999999999999 588899999999874321 1114678999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEc
Q 047141 151 VGLIHFQRNVGHGNAFSISGLS 172 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~i~~~~ 172 (215)
+|..|...-. +++.+++.+..
T Consensus 100 pGs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 100 SGALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp TTCEESCCEE-SSCEEEEEEEE
T ss_pred CCCcccceeC-CCCeEEEEEEE
Confidence 9999985332 23444444443
No 119
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.19 E-value=3.4e-05 Score=63.34 Aligned_cols=87 Identities=16% Similarity=0.108 Sum_probs=70.7
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCC--Cc---eEEEEecCCcEEEE-cCCCeEEEEeCC-CC
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPD--NR---LISKVLQKGDVFVF-PVGLIHFQRNVG-HG 163 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~--~k---~~~~~L~~GDv~v~-P~G~~H~~~N~g-~~ 163 (215)
.++..+...||...++|-|.++..+++|++|+++....+-.++ .+ ....++++||+.++ |++-+|.+.|.+ ++
T Consensus 70 ~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~ 149 (200)
T 3eln_A 70 FNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTE 149 (200)
T ss_dssp CEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSC
T ss_pred eEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCC
Confidence 5777789999999999999988999999999999887542111 11 22589999999999 888899999999 68
Q ss_pred cEEEEEEEcCCCCc
Q 047141 164 NAFSISGLSSQNPG 177 (215)
Q Consensus 164 ~a~~i~~~~s~~pg 177 (215)
+++-+=++.....+
T Consensus 150 ~avSlHvY~pp~~~ 163 (200)
T 3eln_A 150 PAVSLHLYSPPFDT 163 (200)
T ss_dssp CEEEEEEEESCCSE
T ss_pred CEEEEEeCCCCccc
Confidence 99988888766544
No 120
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.91 E-value=7.8e-05 Score=62.79 Aligned_cols=81 Identities=19% Similarity=0.262 Sum_probs=59.3
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
++++..+.+ .|.... -.+| .+|+.||++|++++.. + ++ ..++++||+++||+|..|.+...+.. ..+++
T Consensus 46 ~~~~G~~~~-~g~~~v-~~~p-~dE~~~VleG~~~lt~-~----g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~ 114 (238)
T 3myx_A 46 GIAAGIVEF-GTALSV-EAYP-YTEMLVMHRGSVTLTS-G----TD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAFC 114 (238)
T ss_dssp SEEEEEEEE-CSEEEE-SSCS-SEEEEEEEESEEEEEE-T----TE--EEEEETTCEEEECTTCCEEEEECTTE-EEEEE
T ss_pred CeEEEEEEe-cccccc-ccCC-CcEEEEEEEeEEEEEC-C----Ce--EEEEcCCCEEEECCCCEEEEEecCCe-EEEEE
Confidence 678888888 555433 2234 3899999999999976 2 34 68899999999999999999887655 44555
Q ss_pred EEc-CC---CCceeee
Q 047141 170 GLS-SQ---NPGVITI 181 (215)
Q Consensus 170 ~~~-s~---~pg~~~~ 181 (215)
.+. .. .+|...+
T Consensus 115 ~~~~~~~p~~~~~~~i 130 (238)
T 3myx_A 115 ASTQASGPDKSGITAL 130 (238)
T ss_dssp EECSCCSCCCCSEEEE
T ss_pred eccCCCCCCCCccEEe
Confidence 666 23 4555554
No 121
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.89 E-value=0.00027 Score=58.46 Aligned_cols=84 Identities=15% Similarity=0.182 Sum_probs=67.3
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceE----EEEecCCcEEEEcCC--CeEEEEeCC-CC
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLI----SKVLQKGDVFVFPVG--LIHFQRNVG-HG 163 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~----~~~L~~GDv~v~P~G--~~H~~~N~g-~~ 163 (215)
+++..+...||...++|=|. +.-++.|++|+++-....-..+++.. ...+++||+.+++.+ .+|.+.|.+ ++
T Consensus 73 f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~ 151 (211)
T 3uss_A 73 FSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDR 151 (211)
T ss_dssp CEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred EEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCC
Confidence 47788889999999999999 89999999999988765422112211 378999999999987 899999984 78
Q ss_pred cEEEEEEEcCCC
Q 047141 164 NAFSISGLSSQN 175 (215)
Q Consensus 164 ~a~~i~~~~s~~ 175 (215)
+++-+=++....
T Consensus 152 ~avSLHvYg~pl 163 (211)
T 3uss_A 152 TSISIHVYGANI 163 (211)
T ss_dssp CEEEEEEESSCG
T ss_pred CEEEEEEcCCCC
Confidence 888888886543
No 122
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.88 E-value=0.00018 Score=55.85 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=66.0
Q ss_pred CceEEEeee-ccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCc-EEEE
Q 047141 72 GSRVTPVTV-AQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGD-VFVF 149 (215)
Q Consensus 72 g~~v~~~~~-~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GD-v~v~ 149 (215)
.|.++.+.. ...|- .-.++ ....+..||....+|.|....|++++++|++.+.+.+. ....+..|.+.. .+.+
T Consensus 17 RG~L~~~e~~~~ipf-~ikRv-y~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg---~~~~~~~L~~~~~gL~I 91 (141)
T 2pa7_A 17 RGSLVAIEENKNIPF-SIKRV-YYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG---NIIQEITLDSPAVGLYV 91 (141)
T ss_dssp TEEEEEEETTTTSSS-CCCEE-EEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS---SCEEEEEECCTTEEEEE
T ss_pred CCcEEEEeccCCCCC-CccEE-EEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC---cEEEEEEECCCCcEEEe
Confidence 455666655 33443 11112 22233568888999999999999999999999988543 233456676654 6899
Q ss_pred cCCCeEEEEeCCCCcEEEEEEEc
Q 047141 150 PVGLIHFQRNVGHGNAFSISGLS 172 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~i~~~~ 172 (215)
|+|+.|.+.+.+.. ++++.+-+
T Consensus 92 ppgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 92 GPAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp CTTCEEEEECCCTT-CEEEEEES
T ss_pred CCCEEEEEEEcCCC-eEEEEECC
Confidence 99999999999775 66665543
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.86 E-value=0.00023 Score=57.20 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=61.4
Q ss_pred EcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCC----CceEEEEec---CCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 98 YAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPD----NRLISKVLQ---KGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 98 l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~---~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
..+|.+..+|+|....++++|++|++...+++-..+ ++.....|. ....++||+|..|.+.+.++++++++..
T Consensus 60 s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 60 VLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp ECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 478888999999888999999999999999875321 234577887 5679999999999999998877777665
Q ss_pred Ec
Q 047141 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
.+
T Consensus 140 ~s 141 (174)
T 3ejk_A 140 TD 141 (174)
T ss_dssp ES
T ss_pred CC
Confidence 54
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.79 E-value=0.00012 Score=55.10 Aligned_cols=64 Identities=13% Similarity=0.016 Sum_probs=47.6
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCC
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGH 162 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~ 162 (215)
......+..||... .+.+. ..|++|||+|++++...+ +. ..++++||+++||+|....+.-...
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~-~~E~~~iLeG~~~lt~dd----G~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRD-LEETFVVVEGEALYSQAD----AD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCS-EEEEEEEEECCEEEEETT----CC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEEEEecCCceeE-CeeCC-CcEEEEEEEeEEEEEeCC----Ce--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 35556688998653 23333 359999999999997632 33 5799999999999999988866543
No 125
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.52 E-value=0.00044 Score=58.18 Aligned_cols=63 Identities=17% Similarity=0.293 Sum_probs=49.5
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeC
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNV 160 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~ 160 (215)
.++....+..||...+.+++ ..|+.||++|++++.- ++ ++ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~--~~--G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSL--EN--GS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEE--TT--SC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEe--CC--CC--EEEECCCCEEEECCCCEEEEEEC
Confidence 46788888999875544333 5899999999999865 22 44 68999999999999998877665
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.32 E-value=0.00077 Score=56.37 Aligned_cols=73 Identities=8% Similarity=-0.006 Sum_probs=52.5
Q ss_pred EEEEEEEEcCCcc--cCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeC--CCCcEE
Q 047141 91 IALARIDYAPWGV--VPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNV--GHGNAF 166 (215)
Q Consensus 91 vs~~~~~l~pgg~--~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~--g~~~a~ 166 (215)
.-+....+..... .++|||. .-|++||++|+++ .+.+ +....+.+++||++++|+|.+|.+... ++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~----~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~ 80 (276)
T 3gbg_A 7 FQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDK----NCLVSYEINSSSIILLKKNSIQRFSLTSLSDENIN 80 (276)
T ss_dssp EEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEET----TTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEE
T ss_pred hhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECC----ccceeEEEcCCCEEEEcCCCceeeccccCCCcceE
Confidence 4455556655543 5889998 5999999999999 6632 211147899999999999999998765 334444
Q ss_pred EEE
Q 047141 167 SIS 169 (215)
Q Consensus 167 ~i~ 169 (215)
.+.
T Consensus 81 ~~~ 83 (276)
T 3gbg_A 81 VSV 83 (276)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 127
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.15 E-value=0.014 Score=46.53 Aligned_cols=131 Identities=18% Similarity=0.159 Sum_probs=86.7
Q ss_pred CCCCceEEEeeeccCC-CCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcE-EEEEEEecCCCCceEEEE----ec
Q 047141 69 NPLGSRVTPVTVAQIP-GLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGS-LEVGFVTSNPDNRLISKV----LQ 142 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P-~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~k~~~~~----L~ 142 (215)
.+.||..+......-+ .-.....+..+.-+.+|....+|... +.|+.+...|. +++.+..++ ++..+.+ +.
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~d--g~~~~~~LG~dv~ 102 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPE--GELTTAQLGLDLA 102 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTT--SCEEEEEESSCTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCC--CCEEEEEeCCCcc
Confidence 4678888877765411 11122256777778999887777775 89999999998 588887765 4433444 67
Q ss_pred CCcE--EEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeecchhccCCCCCCHHHHHHHcCCCHHHHHHh
Q 047141 143 KGDV--FVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIANTVFGSNPAIADDLLAKAFQVDKSVVGQL 211 (215)
Q Consensus 143 ~GDv--~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~l 211 (215)
+|+. ++||+|..+..++.+.+-+.+-|+. .||+..-. |.- .+.+-|.+.|---++.|++|
T Consensus 103 ~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~l 164 (170)
T 1yud_A 103 AGERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDD---FEL---FSQEALLAMYPQHKAVVQKL 164 (170)
T ss_dssp TTEESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGG---CCB---CBHHHHHHSCCTTHHHHTTS
T ss_pred cCceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCc---eEE---cCHHHHHhHCchhHHHHHHh
Confidence 7998 9999999999998832444444443 45543321 232 45566666676666666665
No 128
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.08 E-value=0.004 Score=52.83 Aligned_cols=73 Identities=16% Similarity=0.256 Sum_probs=56.3
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcC--CCeEEEEeCCC-CcEEEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPV--GLIHFQRNVGH-GNAFSIS 169 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~--G~~H~~~N~g~-~~a~~i~ 169 (215)
+....+.||.-.++|-|.+-+.+.||++|+++-. |+. ++ ..++++||+-...+ |+.|...|..+ +++.++-
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~-Gn---~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQ 139 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSE-GN---HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQ 139 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETT-SC---EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCC-CC---EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEE
Confidence 4556689998899999997555789999999874 443 24 57899999999954 68999999764 6777666
Q ss_pred EE
Q 047141 170 GL 171 (215)
Q Consensus 170 ~~ 171 (215)
+.
T Consensus 140 lW 141 (256)
T 2vec_A 140 LW 141 (256)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 129
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.04 E-value=0.0035 Score=52.05 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=58.5
Q ss_pred CCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEc
Q 047141 71 LGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFP 150 (215)
Q Consensus 71 ~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P 150 (215)
.|..+..+.... +-.+..+.++||...++|.| .+.|+ +||+|++. +. ...+.+|+.+..|
T Consensus 133 ~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-------~~~~~~GsWlR~P 192 (223)
T 3o14_A 133 EGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-------DEVLGRNAWLRLP 192 (223)
T ss_dssp TTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-------TEEECTTEEEEEC
T ss_pred CCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-------CceECCCeEEEeC
Confidence 455555555443 12345567899999999999 78997 99999976 22 2579999999999
Q ss_pred CCCeEEEEeCCCCcEEEEE
Q 047141 151 VGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~i~ 169 (215)
.|..|.... |++.+.++.
T Consensus 193 ~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 193 EGEALSATA-GARGAKIWM 210 (223)
T ss_dssp TTCCEEEEE-EEEEEEEEE
T ss_pred CCCccCcEE-CCCCeEEEE
Confidence 999999877 667776553
No 130
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.03 E-value=0.0042 Score=52.02 Aligned_cols=80 Identities=21% Similarity=0.149 Sum_probs=57.7
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEc-EEEEEEEecCC-------------CCceE------EEEecCCcEEEEc
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEG-SLEVGFVTSNP-------------DNRLI------SKVLQKGDVFVFP 150 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G-~~~~~~~~~~~-------------~~k~~------~~~L~~GDv~v~P 150 (215)
..--.+.+.+|...|.|.|+.-.|-+++.-| ++.+.+..+++ +++.+ ..+|+||+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4455567899999999999999999999987 55555444321 12111 2489999999999
Q ss_pred CCCeEEEEeCCCC-cEEEEEE
Q 047141 151 VGLIHFQRNVGHG-NAFSISG 170 (215)
Q Consensus 151 ~G~~H~~~N~g~~-~a~~i~~ 170 (215)
+|+.|+++..+.. ++.+-.+
T Consensus 186 Pg~~H~F~ae~g~G~vligEV 206 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVGEV 206 (246)
T ss_dssp TTEEEEEEECTTSCCEEEEEE
T ss_pred CCCEEEEEecCCCccEEEEEc
Confidence 9999999887653 4544433
No 131
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.03 E-value=0.0039 Score=50.40 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=55.8
Q ss_pred cCCcccCCccC--CCCcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 99 APWGVVPPHVH--PRATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 99 ~pgg~~ppH~H--p~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
.+|.+..+|+| ....++++|++|++..-+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37888999999 668999999999986666664311 2456777776 58999999999999999876 655544
Q ss_pred Ec
Q 047141 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
.+
T Consensus 135 ~s 136 (185)
T 1ep0_A 135 CT 136 (185)
T ss_dssp ES
T ss_pred cC
Confidence 33
No 132
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.91 E-value=0.0053 Score=49.57 Aligned_cols=73 Identities=12% Similarity=0.012 Sum_probs=55.5
Q ss_pred cCCcccCCccC--CCCcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 99 APWGVVPPHVH--PRATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 99 ~pgg~~ppH~H--p~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
.+|.+..+|+| .....+++|++|++..-+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 37888999999 667999999999986656664211 2456677776 58999999999999999876 655544
Q ss_pred Ec
Q 047141 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
.+
T Consensus 136 ~s 137 (184)
T 2ixk_A 136 TT 137 (184)
T ss_dssp ES
T ss_pred CC
Confidence 43
No 133
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.80 E-value=0.009 Score=48.15 Aligned_cols=71 Identities=11% Similarity=0.012 Sum_probs=54.3
Q ss_pred cCCcccCCccCC---CCcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHP---RATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|. ....+++|++|++.--+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 378889999995 67899999999986656664321 2455677776 58999999999999999876 55544
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
.
T Consensus 134 ~ 134 (183)
T 1dzr_A 134 K 134 (183)
T ss_dssp E
T ss_pred E
Confidence 3
No 134
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.77 E-value=0.011 Score=49.63 Aligned_cols=73 Identities=16% Similarity=0.133 Sum_probs=55.9
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEE--cCCCeEEEEeCCC-CcEEEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVF--PVGLIHFQRNVGH-GNAFSIS 169 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~--P~G~~H~~~N~g~-~~a~~i~ 169 (215)
+....+.||.-.++|-|.+-+.+.||++|+++-. |+. ++ ..++++||+-.. -+|+.|...|..+ +++.++-
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~-Gn---~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQ 116 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSM-GN---KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQ 116 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESS-SC---EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCC-CC---cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEE
Confidence 4455688988889999997666899999998864 443 24 578999999999 5569999999764 6666665
Q ss_pred EE
Q 047141 170 GL 171 (215)
Q Consensus 170 ~~ 171 (215)
+.
T Consensus 117 lW 118 (242)
T 1tq5_A 117 IW 118 (242)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 135
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.75 E-value=0.013 Score=51.51 Aligned_cols=74 Identities=20% Similarity=0.173 Sum_probs=54.9
Q ss_pred EEEcC-CcccCCccCCCCcEEEEEEEcEEEEEEE-ecCC-------------------------------CCceEEEEec
Q 047141 96 IDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFV-TSNP-------------------------------DNRLISKVLQ 142 (215)
Q Consensus 96 ~~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~-~~~~-------------------------------~~k~~~~~L~ 142 (215)
+-+.| |+..++|+.+ ..-++..++|+=++.+. .+.. ....+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44555 7789999987 47788888999888887 3210 0123578999
Q ss_pred CCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 143 KGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 143 ~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
+||++++|+|..|+..+.++++..-+++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi 251 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITF 251 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEE
Confidence 9999999999999999986555555544
No 136
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.67 E-value=0.0048 Score=49.97 Aligned_cols=68 Identities=19% Similarity=0.406 Sum_probs=50.1
Q ss_pred EEEEEcCC-cccCCccCCCCcEEEEEEEcEEEEEEEecCC--------------------------------CCceEEEE
Q 047141 94 ARIDYAPW-GVVPPHVHPRATEILTVIEGSLEVGFVTSNP--------------------------------DNRLISKV 140 (215)
Q Consensus 94 ~~~~l~pg-g~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------------------------~~k~~~~~ 140 (215)
..+-+.++ +..++|+.+ ..-++.+++|+=++.+..+.. ..+.+..+
T Consensus 126 ~~~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 33445554 456778777 477888999999988865420 01235679
Q ss_pred ecCCcEEEEcCCCeEEEEeCCC
Q 047141 141 LQKGDVFVFPVGLIHFQRNVGH 162 (215)
Q Consensus 141 L~~GDv~v~P~G~~H~~~N~g~ 162 (215)
|++||+++||+|..|..+|.+.
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEeCCCCcEEEEECCC
Confidence 9999999999999999999853
No 137
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.60 E-value=0.017 Score=47.46 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=54.8
Q ss_pred cCCcccCCccCC---CCcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHP---RATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|. ...++++|++|++.--+++-..+ ++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 578889999995 47899999999987666664311 3446778876 78999999999999999865 55443
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
.
T Consensus 157 ~ 157 (205)
T 3ryk_A 157 K 157 (205)
T ss_dssp E
T ss_pred E
Confidence 3
No 138
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.54 E-value=0.03 Score=45.59 Aligned_cols=71 Identities=14% Similarity=0.063 Sum_probs=54.1
Q ss_pred cCCcccCCccCCC---CcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|.. ..++++|++|++..-+++-..+ ++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 5788899999964 6899999999996666664311 2356778875 68999999999999999764 55444
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
.
T Consensus 152 ~ 152 (196)
T 1wlt_A 152 I 152 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 139
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.47 E-value=0.035 Score=45.49 Aligned_cols=73 Identities=14% Similarity=0.030 Sum_probs=54.8
Q ss_pred cCCcccCCccCCC---CcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|.. ...+++|++|++.--+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788899999964 6899999999986666664211 2456778877 47999999999999999876 55544
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
..+
T Consensus 134 ~~s 136 (205)
T 1oi6_A 134 MLS 136 (205)
T ss_dssp EES
T ss_pred ecC
Confidence 333
No 140
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.47 E-value=0.028 Score=42.65 Aligned_cols=71 Identities=20% Similarity=0.275 Sum_probs=54.4
Q ss_pred cCCcccCCc----cCCCCcEEEEEEEcEEEEEEEecCCCC-c-eEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE-EEEE
Q 047141 99 APWGVVPPH----VHPRATEILTVIEGSLEVGFVTSNPDN-R-LISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS-ISGL 171 (215)
Q Consensus 99 ~pgg~~ppH----~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-k-~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~-i~~~ 171 (215)
.|++..+.| +|++..+.+.|++|++++.+.++++ + . .....+.+|+..++|++..|.++-..+ ++.+ +.++
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g-~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFy 99 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEH-SAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFF 99 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTT-CSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCC-CcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEE
Confidence 477788899 5998889999999999998766542 2 1 235678899999999999999987655 4444 4444
No 141
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.40 E-value=0.034 Score=45.90 Aligned_cols=71 Identities=13% Similarity=-0.055 Sum_probs=53.6
Q ss_pred cCCcccCCccCCC---CcEEEEEEEcEEEEEEEecCCC----CceEEEEecCC--cEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPD----NRLISKVLQKG--DVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~G--Dv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|.. ...+++|++|++.--+++-..+ ++.....|.+. ..++||+|..|.+.+.+++ ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788899999975 6899999999986555654211 23456777764 7999999999999999876 44444
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
.
T Consensus 142 ~ 142 (216)
T 2c0z_A 142 L 142 (216)
T ss_dssp E
T ss_pred e
Confidence 3
No 142
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.22 E-value=0.019 Score=50.51 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=55.7
Q ss_pred EEEc-CCcccCCccCCCCcEEEEEEEcEEEEEEEecCC------------------------C---------CceEEEEe
Q 047141 96 IDYA-PWGVVPPHVHPRATEILTVIEGSLEVGFVTSNP------------------------D---------NRLISKVL 141 (215)
Q Consensus 96 ~~l~-pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~------------------------~---------~k~~~~~L 141 (215)
+-+. +|+..++|+.+. .-+..+++|+=++.+..+.. + .+.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4455 456679999885 78888999998888765320 0 13468999
Q ss_pred cCCcEEEEcCCCeEEEEeCCC-CcEEEEEEE
Q 047141 142 QKGDVFVFPVGLIHFQRNVGH-GNAFSISGL 171 (215)
Q Consensus 142 ~~GDv~v~P~G~~H~~~N~g~-~~a~~i~~~ 171 (215)
++||++++|+|..|...|.++ ...+.+...
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999999873 445555544
No 143
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.20 E-value=0.028 Score=45.77 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=56.1
Q ss_pred cCCcccCCccCCCCcEEEEEEE-cEEEEEEEecCCC---CceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 047141 99 APWGVVPPHVHPRATEILTVIE-GSLEVGFVTSNPD---NRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLS 172 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~Ei~yVl~-G~~~~~~~~~~~~---~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~ 172 (215)
.+|.+..+|.|+ ...+++|++ |++..-+++-.++ ++.....|..+..++||+|..|.+.+.++. ++++...+
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 143 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVN 143 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECC
Confidence 678889999996 799999999 9976666664210 345678999999999999999999998755 55554443
No 144
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.19 E-value=0.06 Score=44.73 Aligned_cols=71 Identities=15% Similarity=0.050 Sum_probs=53.5
Q ss_pred cCCcccCCccCCC---CcEEEEEEEcEEEEEEEecCCC----CceEEEEecCC--cEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHPR---ATEILTVIEGSLEVGFVTSNPD----NRLISKVLQKG--DVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp~---a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~G--Dv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|.. ...+++|++|++.--+++-..+ ++.....|.+. ..++||+|..|.+.+.+++ ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5788899999964 6899999999986556653211 23456777764 7999999999999999876 54444
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
.
T Consensus 153 ~ 153 (225)
T 1upi_A 153 L 153 (225)
T ss_dssp E
T ss_pred e
Confidence 3
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.94 E-value=0.056 Score=44.13 Aligned_cols=73 Identities=10% Similarity=-0.073 Sum_probs=55.2
Q ss_pred cCCcccCCccCC---CCcEEEEEEEcEEEEEEEecCCC----CceEEEEecC--CcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 99 APWGVVPPHVHP---RATEILTVIEGSLEVGFVTSNPD----NRLISKVLQK--GDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~ppH~Hp---~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~--GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.+|.+..+|+|. ....++.|++|++.--++|-..+ ++.....|.+ +..++||+|..|.+.+.+++ +.++.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEEE
Confidence 678889999995 57999999999988777764311 3445677776 67999999999999998765 44444
Q ss_pred EEc
Q 047141 170 GLS 172 (215)
Q Consensus 170 ~~~ 172 (215)
-.+
T Consensus 131 ~~t 133 (201)
T 4hn1_A 131 LCS 133 (201)
T ss_dssp EES
T ss_pred eCC
Confidence 333
No 146
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.54 E-value=0.26 Score=41.81 Aligned_cols=86 Identities=20% Similarity=0.193 Sum_probs=65.1
Q ss_pred CCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 69 NPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
|...++.+.++. ..-|-|-.++.++|+-..|+-.|.--.| +||++|++.++ + ..|.+|.-.+
T Consensus 75 ~~~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-------~----~~l~~h~Y~f 136 (303)
T 2qdr_A 75 NIAPGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-------E----WQLNKHSYSF 136 (303)
T ss_dssp TSCCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-------T----EEECTTEEEE
T ss_pred CcCccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-------C----EEecCCceEE
Confidence 444555665554 3346788999999999899988875577 89999999972 2 4699999999
Q ss_pred EcCCCeE-EEEeCCCCcEEEEEEEc
Q 047141 149 FPVGLIH-FQRNVGHGNAFSISGLS 172 (215)
Q Consensus 149 ~P~G~~H-~~~N~g~~~a~~i~~~~ 172 (215)
+|+|+.- .+.-.|.+++.++.+.+
T Consensus 137 ~PaGV~~~~~kv~~~~g~~iL~fe~ 161 (303)
T 2qdr_A 137 IPAGVRIGSWKVLGGEEAEILWMEN 161 (303)
T ss_dssp ECTTCCBCCEEEETTSCEEEEEEEC
T ss_pred ecCCCccCceeecCCCCcEEEEEec
Confidence 9999843 44556888888888743
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.54 E-value=0.042 Score=48.00 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=52.6
Q ss_pred EEEcC-CcccCCccCCCCcEEEEEEEcEEEEEEEecC-------------------CC---------CceEEEEecCCcE
Q 047141 96 IDYAP-WGVVPPHVHPRATEILTVIEGSLEVGFVTSN-------------------PD---------NRLISKVLQKGDV 146 (215)
Q Consensus 96 ~~l~p-gg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-------------------~~---------~k~~~~~L~~GDv 146 (215)
+-+.| |+..++|+.+. .-++..++|+=++.+..+. ++ .+.+..+|++||+
T Consensus 171 l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 171 FRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 34444 55678898874 6778888999888876541 00 1246889999999
Q ss_pred EEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 147 FVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 147 ~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
+++|+|..|+..|.+ ..+.+.+
T Consensus 250 LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 250 LFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEECTTCEEEEEESS--CEEEEEE
T ss_pred EEECCCCeEEEeeCC--CEEEEEE
Confidence 999999999999984 4555554
No 148
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.37 E-value=0.019 Score=49.48 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=49.5
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEec-CC------CCceEEEEecCCcEEEEcCCCeEEEEeCCCC
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTS-NP------DNRLISKVLQKGDVFVFPVGLIHFQRNVGHG 163 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~-~~------~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~ 163 (215)
+.++|+.+.||+.+.||.=+ .|+....+|..++.+.-. ++ +++ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47788899999999998544 355555577777665422 11 233 67899999999999999999999985
Q ss_pred cEEE
Q 047141 164 NAFS 167 (215)
Q Consensus 164 ~a~~ 167 (215)
+-+.
T Consensus 167 ~RIh 170 (290)
T 1e5r_A 167 SRQS 170 (290)
T ss_dssp CCCE
T ss_pred CeEE
Confidence 4333
No 149
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.36 E-value=0.15 Score=46.30 Aligned_cols=65 Identities=23% Similarity=0.402 Sum_probs=48.2
Q ss_pred EEEcCCc-c-cCCccCCCCcEEEEEEEcEEEEEEEecCC--------------CCceEEEEecCCcEEEEcCCCeEEEEe
Q 047141 96 IDYAPWG-V-VPPHVHPRATEILTVIEGSLEVGFVTSNP--------------DNRLISKVLQKGDVFVFPVGLIHFQRN 159 (215)
Q Consensus 96 ~~l~pgg-~-~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------~~k~~~~~L~~GDv~v~P~G~~H~~~N 159 (215)
+-+.|+| . .++|+-. ..-+++.++|+=++.+..+.. +...+..+|++||++++|+|..|+..+
T Consensus 143 ~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3445554 4 3799976 477788889998888866530 012357899999999999999999988
Q ss_pred CC
Q 047141 160 VG 161 (215)
Q Consensus 160 ~g 161 (215)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 150
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.14 E-value=0.19 Score=46.26 Aligned_cols=74 Identities=19% Similarity=0.315 Sum_probs=51.6
Q ss_pred EEEcCCcc--cCCccCCCCcEEEEEEEcEEEEEEEecCC------------------CCceEEEEecCCcEEEEcCCCeE
Q 047141 96 IDYAPWGV--VPPHVHPRATEILTVIEGSLEVGFVTSNP------------------DNRLISKVLQKGDVFVFPVGLIH 155 (215)
Q Consensus 96 ~~l~pgg~--~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~------------------~~k~~~~~L~~GDv~v~P~G~~H 155 (215)
+-+.|+|. .++|+-+. .-++.-++|+=+..+..+.. +......+|++||++++|+|..|
T Consensus 168 ~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred EEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 44555553 47998874 66677778887777765420 01234789999999999999999
Q ss_pred EEEeCCCCcEEEEEE
Q 047141 156 FQRNVGHGNAFSISG 170 (215)
Q Consensus 156 ~~~N~g~~~a~~i~~ 170 (215)
+..+.+++...-+.+
T Consensus 247 ~~~s~~~~~SlhlTi 261 (489)
T 4diq_A 247 QAECQDGVHSLHLTL 261 (489)
T ss_dssp EEEBCSSCCEEEEEE
T ss_pred EEEecCCCceEEEee
Confidence 999986554444443
No 151
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.14 E-value=0.15 Score=43.50 Aligned_cols=83 Identities=24% Similarity=0.280 Sum_probs=59.7
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcC--CCeEEEEeCCCCcEEEEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPV--GLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~--G~~H~~~N~g~~~a~~i~~ 170 (215)
+.. ...++.-.++|-|.+-+-+.||++|+++-. |+. ++ ..++++||+=..-+ |+.|...|..+++...+-+
T Consensus 42 ld~-~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~-Gn---~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 114 (277)
T 2p17_A 42 LME-DIFERGTFDVHPHRGIETVTYVISGELEHF--DSK-AG---HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQL 114 (277)
T ss_dssp EEE-EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETT-TE---EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEE
T ss_pred Eec-CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCC-CC---ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEE
Confidence 344 567777899999986444899999998863 443 13 57899999888876 6799999987777776654
Q ss_pred Ec---C----CCCceeeec
Q 047141 171 LS---S----QNPGVITIA 182 (215)
Q Consensus 171 ~~---s----~~pg~~~~~ 182 (215)
.- . ..|..+.+.
T Consensus 115 WvnLP~~~k~~~P~y~~~~ 133 (277)
T 2p17_A 115 WVNLPSAYKMTEPRYQNLR 133 (277)
T ss_dssp EEECCGGGTTCCCEEEEEC
T ss_pred EeeCChhhcCCCCcceeec
Confidence 42 1 136666654
No 152
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.03 E-value=0.093 Score=45.99 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=50.2
Q ss_pred EEEcC-CcccCCccCCCCc-EEEEEEEcEEEEEEEecCC------------C-------------------------Cce
Q 047141 96 IDYAP-WGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP------------D-------------------------NRL 136 (215)
Q Consensus 96 ~~l~p-gg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~------------~-------------------------~k~ 136 (215)
+-+.+ |...+.|+++..+ -+..++.|+=++.+..+.. + .+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 34444 5567889988543 5889999988877765421 0 122
Q ss_pred EEEEecCCcEEEEcCCCeEEEEeCCCC
Q 047141 137 ISKVLQKGDVFVFPVGLIHFQRNVGHG 163 (215)
Q Consensus 137 ~~~~L~~GDv~v~P~G~~H~~~N~g~~ 163 (215)
+..++++||++++|+|..|+..|.++.
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~s 282 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDTT 282 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCCe
Confidence 578999999999999999999998753
No 153
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.95 E-value=0.17 Score=43.13 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=54.7
Q ss_pred cEEEEEEEEcCCcc---cCCccCCCC--c------EEEEE-EE---cEEEEEEEecCCCCceEEEEecCCcEEEEcCCCe
Q 047141 90 GIALARIDYAPWGV---VPPHVHPRA--T------EILTV-IE---GSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 90 gvs~~~~~l~pgg~---~ppH~Hp~a--~------Ei~yV-l~---G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
.+-+..+ +.|||. .|||.|++. . |+.|. +. |-+.-.+.+++++.. ....++-||++.+|+|.
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~d-e~~~V~~~d~VlvP~Gy- 228 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLD-ECMAVYNRDVVXVPXGY- 228 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSE-EEEEEETTCEEEESSSB-
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCc-eEEEEECCCEEecCCCc-
Confidence 3556655 778775 499999964 4 88865 43 444444433321111 36899999999999999
Q ss_pred EEEEeCCCCcEEEEEEEcCC
Q 047141 155 HFQRNVGHGNAFSISGLSSQ 174 (215)
Q Consensus 155 H~~~N~g~~~a~~i~~~~s~ 174 (215)
|-..........++.++-.+
T Consensus 229 Hp~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 229 HPVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp CCEEECTTCEEEEEEEEECS
T ss_pred CCCcCCCCcccEEEEEEECC
Confidence 98765544556688887653
No 154
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.93 E-value=0.18 Score=43.29 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=68.8
Q ss_pred CceEEEeeeccCCCCCccc--EEEEEEEEcCCcccCCccCCCCcEEEEEE-EcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 72 GSRVTPVTVAQIPGLNTLG--IALARIDYAPWGVVPPHVHPRATEILTVI-EGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 72 g~~v~~~~~~~~P~l~~lg--vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl-~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
|..|+.+. ..|.+...| +-+....+.|+.-.++|-|.+-+-+.||+ +|+++-. |+. ++ ..++++||+=.
T Consensus 21 G~~v~R~~--~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~-Gn---~~~i~~GdvQw 92 (290)
T 1j1l_A 21 GARVRRSI--GRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFC-GH---TGKMNPGDLQW 92 (290)
T ss_dssp TEEEEECT--TSTTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETT-SC---EEEECTTCEEE
T ss_pred CeEEEEeC--CCccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCC-CC---ceEECCCcEEE
Confidence 34454443 334444444 34455567888778999998644478999 9999864 444 24 57899999888
Q ss_pred EcC--CCeEEEEeCCCCcEEEEEEEc---C----CCCceeeec
Q 047141 149 FPV--GLIHFQRNVGHGNAFSISGLS---S----QNPGVITIA 182 (215)
Q Consensus 149 ~P~--G~~H~~~N~g~~~a~~i~~~~---s----~~pg~~~~~ 182 (215)
.-+ |+.|...|..+++...+-+.- . ..|..+.+.
T Consensus 93 MtAG~GI~HsE~~~~~~~~~~lQlWvnLP~~~k~~~P~y~~~~ 135 (290)
T 1j1l_A 93 MTAGRGILHAEMPCSEEPAHGLQLWVNLRSSEKMVEPQYQELK 135 (290)
T ss_dssp EECTTCEEEEEEECSSSCEEEEEEEEECCGGGTTSCCEEEEEC
T ss_pred EeCCCCEEEEeEcCCCCCEEEEEEEecCChhhcCCCCcceecc
Confidence 865 689999998667777665542 1 246666653
No 155
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.85 E-value=0.048 Score=49.77 Aligned_cols=77 Identities=21% Similarity=0.126 Sum_probs=55.0
Q ss_pred cCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
.+|+..+.|+.+.++ -+..+++|+=++.+..+.. ..+.+..++++||+++||.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 456678999998643 5778999999888765431 0134678999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEcCCC
Q 047141 155 HFQRNVGHGNAFSISGLSSQN 175 (215)
Q Consensus 155 H~~~N~g~~~a~~i~~~~s~~ 175 (215)
|...|..+.-++---.+++.|
T Consensus 284 H~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 284 HAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEECSSCEEEEEEEECCSSS
T ss_pred EEEecCCCeEEEeeeeCCccc
Confidence 999998544333333444443
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.78 E-value=0.057 Score=49.72 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=49.7
Q ss_pred cCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
.+|+..+.|..+.++ -+..+++|+=++.+..+.. ..+.+..++++||+++||.|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 456678999998544 4678999999988875520 1234678999999999999999
Q ss_pred EEEEeCCC
Q 047141 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999743
No 157
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.56 E-value=0.12 Score=47.06 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=49.9
Q ss_pred cCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
.+|+..+.|..+.++ -+..+++|+=++.+..+.. ..+.+..++++||++++|.|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 456678899988544 4678999999888875431 0234678999999999999999
Q ss_pred EEEEeCCCC
Q 047141 155 HFQRNVGHG 163 (215)
Q Consensus 155 H~~~N~g~~ 163 (215)
|+..|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999998543
No 158
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.42 E-value=0.15 Score=46.50 Aligned_cols=56 Identities=9% Similarity=0.039 Sum_probs=43.2
Q ss_pred CCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 105 PPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 105 ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
..-..-+++|++++-+|++.+.- +- + ...+++||.++||+|+.+.+.-.+ ++..+.
T Consensus 171 ~~f~NaDGD~Livpq~G~l~i~T--Ef--G---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 171 RCFYNSDGDFLIVPQKGNLLIYT--EF--G---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp EEEEESSEEEEEEEEESCEEEEE--TT--E---EEEECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred ceeecCCCCEEEEEEeCCEEEEE--ec--c---cEEeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 34456678999999999999865 22 3 468999999999999999986655 554443
No 159
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.25 E-value=0.095 Score=46.62 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=49.6
Q ss_pred cCCcccCCccCCCCcE-EEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRATE-ILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~E-i~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
.+|+..+.|..+.++- +..+++|+=++.+..+.. ..+.+..++++||++++|+|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 4566789999986553 578999998888875421 0234678999999999999999
Q ss_pred EEEEeCCC
Q 047141 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|+..|..+
T Consensus 235 H~V~nled 242 (371)
T 3k3o_A 235 HAVLTPVD 242 (371)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999743
No 160
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=94.04 E-value=0.4 Score=41.04 Aligned_cols=82 Identities=20% Similarity=0.267 Sum_probs=55.5
Q ss_pred cEEEEEEEEcCCcc---cCCccCCCCcEEEEEEE---cEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCC
Q 047141 90 GIALARIDYAPWGV---VPPHVHPRATEILTVIE---GSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHG 163 (215)
Q Consensus 90 gvs~~~~~l~pgg~---~ppH~Hp~a~Ei~yVl~---G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~ 163 (215)
.+.+....+.||+. .|||.|.+..|..|--+ ....+++..+. ++.+...++-||++++|...+|.. .|.+
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~g~p--~Etrhi~V~n~daVlvP~wh~h~~--~G~~ 254 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQP--QETRHIVMHNEQAVISPSWSIHSG--VGTK 254 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEEEET--TEEEEEEECSSEEEEECTTCEEEE--EESS
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEeCCC--CCeeEEEEECCCEEEeCCCCCCCC--CCcc
Confidence 45577778888873 59999997777666554 11334444432 343456789999999997677773 4777
Q ss_pred cEEEEEEEcCCC
Q 047141 164 NAFSISGLSSQN 175 (215)
Q Consensus 164 ~a~~i~~~~s~~ 175 (215)
...+++++-.+|
T Consensus 255 ~Y~ylwvMAG~n 266 (282)
T 1xru_A 255 AYTFIWGMVGEN 266 (282)
T ss_dssp CCEEEEEEEESC
T ss_pred ceEEEEEEEcCC
Confidence 777888775444
No 161
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=93.89 E-value=0.16 Score=43.53 Aligned_cols=61 Identities=18% Similarity=0.087 Sum_probs=43.7
Q ss_pred EcCCccc-CCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 98 YAPWGVV-PPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 98 l~pgg~~-ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
+.+|... ..-. ..-++++++|+..+.+. ++ ++.|++||++.||+|..|.+.-. +.++++.+
T Consensus 214 ~G~Ges~~~~~~---~d~wiWqLEGss~Vt~~-----~q--~~~L~~~DsLLIpa~~~y~~~r~--~gsv~L~I 275 (286)
T 2qnk_A 214 YGQGSSEGLRQN---VDVWLWQLEGSSVVTMG-----GR--RLSLAPDDSLLVLAGTSYAWERT--QGSVALSV 275 (286)
T ss_dssp ECSEEEEECCCS---SCEEEEEEESCEEEEET-----TE--EEEECTTEEEEECTTCCEEEEEC--TTCEEEEE
T ss_pred EcCCccccccCc---CcEEEEEEcCceEEEEC-----Ce--EEeccCCCEEEecCCCeEEEEec--CCeEEEEE
Confidence 6666542 2221 26789999999988772 34 78999999999999999998664 33444443
No 162
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.59 E-value=0.44 Score=38.65 Aligned_cols=88 Identities=17% Similarity=0.177 Sum_probs=55.5
Q ss_pred ccCCCCCcccE-EEEEEEEcCCcccCCccCCCCcEE----EEEEEc-EEEEEEEecCCCCceEEEEecCCcEEEEcCCCe
Q 047141 81 AQIPGLNTLGI-ALARIDYAPWGVVPPHVHPRATEI----LTVIEG-SLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 81 ~~~P~l~~lgv-s~~~~~l~pgg~~ppH~Hp~a~Ei----~yVl~G-~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
+++|++...+. ++....+.||+.++||..+....+ .+++-. ...+.+ +++ ....++|++++|.-...
T Consensus 91 ~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V-----~~~--~~~w~eGe~~~fDds~~ 163 (197)
T 3rcq_A 91 EKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC-----ANE--TKTWEEGKVLIFDDSFE 163 (197)
T ss_dssp TTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE-----TTE--EECCCBTCEEEECTTSC
T ss_pred HhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE-----CCE--EEEeeCCcEEEEcCCeE
Confidence 44554432221 345567899999999998853332 122211 233333 133 67899999999999999
Q ss_pred EEEEeCCCCcEEEEEEEcCCCC
Q 047141 155 HFQRNVGHGNAFSISGLSSQNP 176 (215)
Q Consensus 155 H~~~N~g~~~a~~i~~~~s~~p 176 (215)
|...|.++++-+++ +++-..|
T Consensus 164 Hev~N~~d~~RvvL-~~D~~rP 184 (197)
T 3rcq_A 164 HEVWQDASSFRLIF-IVDVWHP 184 (197)
T ss_dssp EEEEECSSSCEEEE-EEEEECT
T ss_pred EEEEECCCCCEEEE-EEeeeCC
Confidence 99999988755544 3443344
No 163
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=93.59 E-value=0.15 Score=45.73 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=49.0
Q ss_pred cCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
..|+..+.|+.+.++ -+..+++|+=++.+..+.. ..+.+..++++||++++|+|..
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 446678999998654 3678999998888875431 0234678999999999999999
Q ss_pred EEEEeCC
Q 047141 155 HFQRNVG 161 (215)
Q Consensus 155 H~~~N~g 161 (215)
|+..|..
T Consensus 263 H~V~nle 269 (397)
T 3kv9_A 263 HAVLTSQ 269 (397)
T ss_dssp EEEEEEE
T ss_pred EEccCCc
Confidence 9999973
No 164
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.54 E-value=0.52 Score=33.80 Aligned_cols=66 Identities=17% Similarity=0.058 Sum_probs=48.2
Q ss_pred EEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 047141 96 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGL 171 (215)
Q Consensus 96 ~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~ 171 (215)
-.+.||. .+....+.|++-|++|++++.+-++ .. .+++++||.|.+|.+.--.++-. ++..+++.+
T Consensus 28 GVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~---~e--w~~~~aGesF~Vpans~F~l~v~--~~~~YlC~y 93 (94)
T 2oyz_A 28 GVMLPGE---YTFGTQAPERMTVVKGALVVKRVGE---AD--WTTYSSGESFDVEGNSSFELQVK--DATAYLCEY 93 (94)
T ss_dssp EEECSEE---EEEEESSCEEEEEEESEEEEEETTC---SS--CEEEETTCEEEECSSEEEEEEES--SCEEEEEEC
T ss_pred EEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCC---Cc--CEEECCCCEEEECCCCEEEEEEc--ccEeEEEEc
Confidence 3466764 3333457999999999999998543 23 68999999999999987776553 556666543
No 165
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=93.15 E-value=0.2 Score=44.85 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=49.4
Q ss_pred cCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
..|+..+.|..+.++ -+..+++|+=++-+..+.. ..+.+..++++||++++|.|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 456678999988544 5778999998888865431 0134678999999999999999
Q ss_pred EEEEeCCC
Q 047141 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|+..|..+
T Consensus 262 H~V~nled 269 (392)
T 3pua_A 262 YATLTPVD 269 (392)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999743
No 166
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=92.37 E-value=0.68 Score=34.13 Aligned_cols=67 Identities=18% Similarity=0.205 Sum_probs=50.6
Q ss_pred EEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 047141 97 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGL 171 (215)
Q Consensus 97 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~ 171 (215)
.+.||. .|.+....+.|++-|++|++++.+-++ .. .+++++|+.|.+|.+.-..++-. ++..++|.|
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~---~e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADS---TE--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTC---SS--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCc---cc--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 467773 335555667999999999999999543 23 68999999999999998776553 566666654
No 167
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=92.31 E-value=0.47 Score=40.70 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=46.6
Q ss_pred cEEEEEEEEcCCcc---cCCccCCCCcEEEEEEE--c-EEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCC
Q 047141 90 GIALARIDYAPWGV---VPPHVHPRATEILTVIE--G-SLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHG 163 (215)
Q Consensus 90 gvs~~~~~l~pgg~---~ppH~Hp~a~Ei~yVl~--G-~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~ 163 (215)
.+.+....+.||+. .|||.|.+..|..|--+ . ...+++..+- ++.+...++-||++++|+|-.|. ..|..
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~p--dEtrh~~V~n~daVlvP~wgyHp--~~Gt~ 254 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKP--DETKHLVMSNEQAAISPSWSIHS--GVGTS 254 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESST--TSCEEEEECTTEEEEECTTSCCC--EEESS
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCC--CceEEEEEECCCEEEeCCCcccC--CCCCc
Confidence 45577778888873 49999997777766443 1 1223333321 33345678999999999998996 24555
Q ss_pred cEEEEEEEcCCC
Q 047141 164 NAFSISGLSSQN 175 (215)
Q Consensus 164 ~a~~i~~~~s~~ 175 (215)
.-.+++++-.+|
T Consensus 255 ~Y~ylwvMAG~n 266 (289)
T 1ywk_A 255 NYSFIWAMCGEN 266 (289)
T ss_dssp CCEEEEEEECC-
T ss_pred CeEEEEEEEcCC
Confidence 556777776554
No 168
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=92.19 E-value=0.22 Score=46.19 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=48.8
Q ss_pred cCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCC-----------------------CCceEEEEecCCcEEEEcCCCe
Q 047141 99 APWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNP-----------------------DNRLISKVLQKGDVFVFPVGLI 154 (215)
Q Consensus 99 ~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~-----------------------~~k~~~~~L~~GDv~v~P~G~~ 154 (215)
..|+...+|..+.++ -+..|++|+=++.+..+.. ..+.+..++++||.+++|+|.+
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 456668889888544 5788999998888776531 1233568999999999999999
Q ss_pred EEEEeCC
Q 047141 155 HFQRNVG 161 (215)
Q Consensus 155 H~~~N~g 161 (215)
|+..|..
T Consensus 384 HaV~tle 390 (528)
T 3pur_A 384 HAVLTPV 390 (528)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999973
No 169
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.76 E-value=0.81 Score=37.26 Aligned_cols=68 Identities=19% Similarity=0.139 Sum_probs=41.5
Q ss_pred EEEEEEcCCcccCCccCCCCcE--EEEEEE--cEEEEEEEecCC-----------C-----CceEEEEecCCcEEEEcCC
Q 047141 93 LARIDYAPWGVVPPHVHPRATE--ILTVIE--GSLEVGFVTSNP-----------D-----NRLISKVLQKGDVFVFPVG 152 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~E--i~yVl~--G~~~~~~~~~~~-----------~-----~k~~~~~L~~GDv~v~P~G 152 (215)
.-...+++|+...+|.|+++.- ++|+-. +.+.+.|.++.. + .......-++|++++||+.
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~ 184 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW 184 (216)
T ss_dssp EEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT
T ss_pred EEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC
Confidence 3445679999999999985321 233332 223333443310 0 1112456789999999999
Q ss_pred CeEEEEeC
Q 047141 153 LIHFQRNV 160 (215)
Q Consensus 153 ~~H~~~N~ 160 (215)
+.|...-.
T Consensus 185 l~H~V~p~ 192 (216)
T 2rg4_A 185 LRHEVPMN 192 (216)
T ss_dssp SCEEECCC
T ss_pred CEEeccCC
Confidence 99998543
No 170
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=89.53 E-value=0.88 Score=33.26 Aligned_cols=55 Identities=18% Similarity=0.129 Sum_probs=42.3
Q ss_pred EEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEe
Q 047141 97 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRN 159 (215)
Q Consensus 97 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N 159 (215)
.+.||. .+....+.|++-|++|++++.+-++ .. .+++++|+.|.+|.+.-..++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~---~e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGA---ND--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTC---SS--CEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCC---cc--CEEECCCCEEEECCCCcEEEEE
Confidence 356663 3445567999999999999988543 23 6899999999999998766644
No 171
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=88.90 E-value=2.4 Score=38.30 Aligned_cols=75 Identities=9% Similarity=0.070 Sum_probs=46.4
Q ss_pred EEEEEEEEc--CCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEE-EEecCCcEEEEcCCCeEEEEeC---CCCc
Q 047141 91 IALARIDYA--PWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLIS-KVLQKGDVFVFPVGLIHFQRNV---GHGN 164 (215)
Q Consensus 91 vs~~~~~l~--pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~-~~L~~GDv~v~P~G~~H~~~N~---g~~~ 164 (215)
.++.++++. ++.....-.+ .+..+++|++|++++... + .+. . ..|++||++++|.+..-.+.+. +.+.
T Consensus 357 F~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~--~--~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~ 430 (440)
T 1pmi_A 357 FSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQIT--G--DDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQD 430 (440)
T ss_dssp CEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEET--T--CGG-GCEEEETTCEEEECTTCCEEEEECSSCCSSC
T ss_pred EEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeC--C--ccc-ceEEeccCCEEEEeCCCcEEEEEecccCCCc
Confidence 467777776 3422111122 368899999999998652 1 211 1 5899999999999844344444 1345
Q ss_pred EEEEEEE
Q 047141 165 AFSISGL 171 (215)
Q Consensus 165 a~~i~~~ 171 (215)
+.++.++
T Consensus 431 ~~~~~a~ 437 (440)
T 1pmi_A 431 FTTYRAF 437 (440)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 5555544
No 172
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=88.53 E-value=2.9 Score=31.11 Aligned_cols=47 Identities=17% Similarity=0.112 Sum_probs=35.7
Q ss_pred cEEEEEEEcEEEEEEEecCCC-CceEEEEecCCcEEEEcCCCeEEEEe
Q 047141 113 TEILTVIEGSLEVGFVTSNPD-NRLISKVLQKGDVFVFPVGLIHFQRN 159 (215)
Q Consensus 113 ~Ei~yVl~G~~~~~~~~~~~~-~k~~~~~L~~GDv~v~P~G~~H~~~N 159 (215)
-..+-|++|++++...+++++ .-.....+.+|+..++|+...|.++-
T Consensus 39 WgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~ 86 (119)
T 3dl3_A 39 FGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL 86 (119)
T ss_dssp EEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE
T ss_pred EEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE
Confidence 346889999999987654321 11135688999999999999999983
No 173
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=87.13 E-value=2 Score=36.98 Aligned_cols=56 Identities=25% Similarity=0.401 Sum_probs=39.6
Q ss_pred EEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEE
Q 047141 91 IALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHF 156 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~ 156 (215)
.++.++++..+... ...++..+++|++|++++.. + ++ ...|++||.+++|++.-.+
T Consensus 251 F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~--~~--~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 251 FSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---E--DK--TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp CEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---T--TE--EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---C--CE--EEEEcCCcEEEEeCCCceE
Confidence 36667777644322 22346899999999999865 2 33 5789999999999987433
No 174
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=86.59 E-value=0.88 Score=40.58 Aligned_cols=57 Identities=18% Similarity=0.138 Sum_probs=40.0
Q ss_pred cEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEE
Q 047141 90 GIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHF 156 (215)
Q Consensus 90 gvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~ 156 (215)
..++.++++.++... ..+. +..+++|++|++++.. + ++ ...|++||++++|++...+
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~---~--~~--~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRK---D--EQ--RLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEE---T--TE--EEEECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEE---C--Ce--EEEEccCcEEEEeCCCceE
Confidence 346777777655321 2333 5799999999999754 1 23 5789999999999985333
No 175
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=84.48 E-value=6.3 Score=32.60 Aligned_cols=69 Identities=9% Similarity=-0.030 Sum_probs=46.3
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
..+.+..+.+++|+....-..++-.-++||++|++++ + + ..|++||.+++..+..-.+.+. +++.++
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v-----~--g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~L 224 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI-----N--G----VKASTSDGLAIWDEQAISIHAD--SDSEVL 224 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEE-----T--T----EEEETTCEEEEESCSCEEEEES--SSEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEE-----C--C----EEeCCCCEEEECCCCeEEEEeC--CCCEEE
Confidence 3567888889999875333334335679999999987 2 2 3699999999976654344442 455555
Q ss_pred EE
Q 047141 169 SG 170 (215)
Q Consensus 169 ~~ 170 (215)
.+
T Consensus 225 l~ 226 (242)
T 1tq5_A 225 LF 226 (242)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 176
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.35 E-value=1.1 Score=39.94 Aligned_cols=41 Identities=22% Similarity=0.281 Sum_probs=32.0
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC
Q 047141 135 RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLSSQN 175 (215)
Q Consensus 135 k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~s~~ 175 (215)
+.++..-++||.++||+|.+|...|..+.-.+..-.++.++
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 44678889999999999999999999865555555555544
No 177
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=84.04 E-value=2.5 Score=30.39 Aligned_cols=52 Identities=10% Similarity=0.157 Sum_probs=36.2
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|...-..-- .+..+.+|++|.+.+...+.+ +.+.....+.+||++
T Consensus 29 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGD-PGDRLYVVTEGKVKLHRTSPD-GRENMLAVVGPSELI 80 (149)
T ss_dssp EEEEECTTCEEECTTS-EECEEEEEEESCEEEEEECTT-SSEEEEEEECTTCEE
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEecEEEEEEECCC-CcEEEEEEcCCcCEe
Confidence 4566788876532222 257799999999999877654 244456789999987
No 178
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=84.02 E-value=5 Score=34.23 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=39.0
Q ss_pred EEEEEEEEcCCcccCCccCCCCc-EEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEE
Q 047141 91 IALARIDYAPWGVVPPHVHPRAT-EILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQR 158 (215)
Q Consensus 91 vs~~~~~l~pgg~~ppH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~ 158 (215)
.++.++++.+.... .. ++. .+++|++| +++.. + ++ ...|++||.+++|++.-.+..
T Consensus 230 F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~-~----~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 230 FGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR-G----KE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp EEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE-S----SS--EEEECTTCEEEECTTCCEEEE
T ss_pred EEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe-C----Ce--EEEEccceEEEEeCCCceEEE
Confidence 46667776542222 23 467 99999999 88765 2 23 468999999999998855443
No 179
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=82.44 E-value=2.5 Score=30.13 Aligned_cols=54 Identities=13% Similarity=0.262 Sum_probs=32.5
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceE---EEEecCCcEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLI---SKVLQKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~---~~~L~~GDv~v 148 (215)
+....+++|...-.- ...+..+.+|++|++.+...++++ ++.. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGA-GSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCC-CceEeeeEEEecCCCEec
Confidence 345567787754222 223578999999999987655542 3334 56789999874
No 180
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=81.83 E-value=4.6 Score=30.69 Aligned_cols=117 Identities=10% Similarity=0.006 Sum_probs=47.1
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE-Ec---CCCe--EEEEeCCCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV-FP---VGLI--HFQRNVGHGNAFS 167 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v-~P---~G~~--H~~~N~g~~~a~~ 167 (215)
....+++|...-.- ...+..+.+|++|.+++...+++| ++.....+.+||++- +. .+.+ +.... .+++.+
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G-~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a--~~~~~v 106 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKG-IEQTTQFAIENWWLSDYMAFQKQQPADFYIQS--VENCEL 106 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEECCHHHHHHTCBCSSEEEE--SSCEEE
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCC-CEEEEEEccCCcEEeehHHHhcCCCCceEEEE--ECCEEE
Confidence 34567777754221 223578999999999998876652 444567889999985 21 1222 23333 345555
Q ss_pred EEEEc-------CCCCceee----------------------------ecchhcc---CCCCCCHHHHHHHcCCCHHHHH
Q 047141 168 ISGLS-------SQNPGVIT----------------------------IANTVFG---SNPAIADDLLAKAFQVDKSVVG 209 (215)
Q Consensus 168 i~~~~-------s~~pg~~~----------------------------~~~~~f~---~~p~~p~~vla~af~~~~~~v~ 209 (215)
+.+-. .++|.... ++..+.. -.-+++.+-+|.-.|++++++.
T Consensus 107 ~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~t~~~iA~~lG~sretls 186 (194)
T 3dn7_A 107 LSITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHMYSKEEQYHNFSSRFPEFIQRVPQYLLASYLGFTPEYLS 186 (194)
T ss_dssp EEEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------------------------
T ss_pred EEEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHChHHHHHCCHHHHHHHhCCCHHHHH
Confidence 54421 12442111 1111100 0113788888888888888888
Q ss_pred Hhhhc
Q 047141 210 QLQTK 214 (215)
Q Consensus 210 ~lk~~ 214 (215)
++.++
T Consensus 187 R~l~~ 191 (194)
T 3dn7_A 187 EIRKK 191 (194)
T ss_dssp -----
T ss_pred HHHHh
Confidence 88665
No 181
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=81.14 E-value=12 Score=31.69 Aligned_cols=77 Identities=10% Similarity=0.043 Sum_probs=50.3
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEE
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~ 167 (215)
...+.+..+.+++|+.......+...-++||++|++++. +. .. ...+.++.++++..|..-.+.+.+.+++.+
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~---~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~ 238 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD---DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHF 238 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT---TS--CEEECTTEEEEECSCSEEEEECCSSSCEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc---cc--ceeccCceEEEecCCCEEEEEEcCCCCcEE
Confidence 446788889999998764443333356899999999872 11 11 145777777777777655555544566776
Q ss_pred EEEE
Q 047141 168 ISGL 171 (215)
Q Consensus 168 i~~~ 171 (215)
+.+-
T Consensus 239 LLl~ 242 (290)
T 1j1l_A 239 VLIA 242 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 182
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=81.09 E-value=4.9 Score=30.71 Aligned_cols=53 Identities=21% Similarity=0.322 Sum_probs=36.7
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
....+++|...-. -......+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIY-AGDRCETLFFIIKGSVTILIEDDDG-REMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCCcc
Confidence 3456777775422 2223578999999999998876652 444567899999884
No 183
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=80.15 E-value=5.4 Score=31.34 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=36.6
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|...-.--. ....+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEE-KAQAIHVVIDGWVKLFRMTPTG-SEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 3456777776432222 2578999999999998876652 44456789999988
No 184
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=79.93 E-value=4.8 Score=31.01 Aligned_cols=53 Identities=13% Similarity=0.063 Sum_probs=37.0
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
....+++|...-.--. ....+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 23 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGD-LGQALYLVASGKVRLFRTHLGG-QERTLALLGPGELFG 75 (216)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECSSS-CEEEEEEECTTCEEC
T ss_pred eEEEeCCCCEEEeCCC-CCCEEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEe
Confidence 3456777775432222 2578999999999998876552 444567899999873
No 185
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=79.39 E-value=6.2 Score=30.22 Aligned_cols=52 Identities=17% Similarity=0.234 Sum_probs=36.2
Q ss_pred EEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 95 RIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 95 ~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
...+++|...-.---+ ...+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 21 ~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTC-CEEEEEEEETTCEES
T ss_pred EEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEee
Confidence 4567777654322222 578999999999998876652 444567889999884
No 186
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=79.19 E-value=3.4 Score=35.61 Aligned_cols=46 Identities=22% Similarity=0.353 Sum_probs=31.4
Q ss_pred CcEEEEEEEc----EEEEEEEecCC--------CC----ceEEEEecCCcEEEEcCCCeEEE
Q 047141 112 ATEILTVIEG----SLEVGFVTSNP--------DN----RLISKVLQKGDVFVFPVGLIHFQ 157 (215)
Q Consensus 112 a~Ei~yVl~G----~~~~~~~~~~~--------~~----k~~~~~L~~GDv~v~P~G~~H~~ 157 (215)
-+|+.|+++. ++.++....+. .+ -+....+++||.+++|+|.+|..
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEE
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEe
Confidence 5899999985 34444211000 00 01368999999999999999997
No 187
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=78.99 E-value=15 Score=30.87 Aligned_cols=72 Identities=11% Similarity=0.035 Sum_probs=47.8
Q ss_pred cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcC-C----CeEEEEeCCC
Q 047141 88 TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPV-G----LIHFQRNVGH 162 (215)
Q Consensus 88 ~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~-G----~~H~~~N~g~ 162 (215)
...+.+..+.+++|........+...-++||++|++++ + +. ...|++||.+++.. | ..-.+.+.
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v-----~--g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~-- 232 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF-----G--AD--NIEGKAGQALFFSRHNRGEETELNVTAR-- 232 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE-----T--TT--TEEEETTEEEEECCCCTTCEEEEEEEES--
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE-----C--CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--
Confidence 34678888999999876444433335689999999876 1 21 24699999999985 5 33334443
Q ss_pred CcEEEEEE
Q 047141 163 GNAFSISG 170 (215)
Q Consensus 163 ~~a~~i~~ 170 (215)
+++.++.+
T Consensus 233 ~~a~~Ll~ 240 (277)
T 2p17_A 233 EKLRLLLY 240 (277)
T ss_dssp SSEEEEEE
T ss_pred CCcEEEEE
Confidence 34555543
No 188
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=78.84 E-value=2.3 Score=30.84 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=33.9
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+++|...-.--.+ +..+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEccCCCee
Confidence 345567788765332233 578999999999987655432 33345789999987
No 189
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=78.72 E-value=6.2 Score=30.72 Aligned_cols=52 Identities=13% Similarity=0.277 Sum_probs=36.3
Q ss_pred EEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 95 RIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 95 ~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
...+++|...-.- ...+..+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 31 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 31 PVDFPRGHTVFAE-GEPGDRLYIIISGKVKIGRRAPDG-RENLLTIMGPSDMFG 82 (227)
T ss_dssp EEEECTTCEEECT-TCCCCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred EEEeCCCCEEEcC-CCcCCEEEEEEeeEEEEEEECCCC-cEEEEEEecCCCEEe
Confidence 4567777754322 223578999999999998876552 444567899999873
No 190
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=78.72 E-value=5.7 Score=30.89 Aligned_cols=53 Identities=19% Similarity=0.161 Sum_probs=37.2
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
....+++|...-..-- ....+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGD-PAGTLYYVISGSVSIIAEEDDD-RELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEE
Confidence 3456777775432222 2578999999999998877652 444567899999984
No 191
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=78.61 E-value=5.8 Score=31.02 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=37.5
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
+....+++|...-.---+ ...+.+|++|.+.+...+++ +.+.....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~-g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLG-GRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC---CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCC-CceEEEEecCCCCEEe
Confidence 345678888765433233 57899999999999887655 2445567899999873
No 192
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=78.58 E-value=6.1 Score=30.25 Aligned_cols=53 Identities=9% Similarity=0.010 Sum_probs=36.9
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|...-.-=- .+..+.+|++|++.+...++++ .+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~-~~~~ly~I~~G~v~v~~~~~~g-~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGD-PGDYLLLILTGEVNVIKDIPNK-GIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEEETTT-EEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCC-CeEEEEEccCCCee
Confidence 34556788876432222 3578999999999998877652 34456789999987
No 193
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=78.54 E-value=1.5 Score=37.54 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=34.6
Q ss_pred CcEEEEEEE-cEEEEEEEecCC---------CCc------eEEEEecCCcEEEEcCCCeEEE
Q 047141 112 ATEILTVIE-GSLEVGFVTSNP---------DNR------LISKVLQKGDVFVFPVGLIHFQ 157 (215)
Q Consensus 112 a~Ei~yVl~-G~~~~~~~~~~~---------~~k------~~~~~L~~GDv~v~P~G~~H~~ 157 (215)
-+|+.|+++ .++..||-.... +++ +....+++||.+++|+|.+|..
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAG 178 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEc
Confidence 479999998 667777643210 123 4568899999999999999997
No 194
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=77.49 E-value=5.1 Score=31.60 Aligned_cols=53 Identities=8% Similarity=0.048 Sum_probs=37.1
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+++|...-.--. .+..+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G-~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGN-PCTQLCFLLKGEISIVTNAKEN-IYTVIEQIEAPYLI 95 (232)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECGGG-SCEEEEEEESSEEE
T ss_pred cEEEEECCCCEEECCCC-cccEEEEEEeeEEEEEEECCCC-CEEEEEEccCCCee
Confidence 35566788876533222 3578999999999998766542 44456788999987
No 195
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=77.11 E-value=11 Score=31.53 Aligned_cols=71 Identities=14% Similarity=0.017 Sum_probs=46.2
Q ss_pred ccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 89 LGIALARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
..+.+..+.+++|........++. -++||++|++++. +.+ .. ...|.+||.+++-.+..-.+.+ .+++.++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~--~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THH--EE--KAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETT--EE--EEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccc--cc--ceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 356778889999987644444433 7899999999874 211 11 3579999999997665433433 2445544
No 196
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=77.01 E-value=5.5 Score=30.42 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=33.3
Q ss_pred EEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 97 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 97 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
.+++|...-.--. .+..+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 3 ~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYLRGE-EARTLYRLEEGLVRVVELLPDG-RLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEECTTS-BCCCEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred EcCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEec
Confidence 3556654322112 2567999999999998776552 444567899999884
No 197
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=76.60 E-value=8.2 Score=28.35 Aligned_cols=51 Identities=6% Similarity=-0.050 Sum_probs=34.7
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+.+|..+-. -...+..+.+|++|++.+.. +.+ +.......+.+||++
T Consensus 62 ~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~-~~~-g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 62 FEKLVKEGEHVID-QGDDGDNFYVIDRGTFDIYV-KCD-GVGRCVGNYDNRGSF 112 (161)
T ss_dssp EEEEECTTCEEEC-TTSCCCEEEEEEESEEEEEE-EET-TEEEEEEEEESCCEE
T ss_pred ceeEeCCCCEEEe-CCCCCcEEEEEEeCEEEEEE-cCC-CCeEEEEEcCCCCEe
Confidence 4466778775422 23336889999999999987 444 134456678999966
No 198
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=76.59 E-value=8.6 Score=29.80 Aligned_cols=114 Identities=14% Similarity=0.216 Sum_probs=67.8
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEEEc-
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISGLS- 172 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~~~- 172 (215)
....+++|...-.--. .+..+++|++|.+.+ ..+.+ +.+.....+.+||++-.| ..+..... +++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~-~~~~~-G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~~ 100 (220)
T 2fmy_A 28 REQRYSKKAILYTPNT-ERNLVFLVKSGRVRV-YLAYE-DKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDIR 100 (220)
T ss_dssp EEEEECTTCEEECTTC-SSCEEEEEEESEEEE-EEECS-SCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEHH
T ss_pred heeEeCCCCEEECCCC-CCCeEEEEEecEEEE-EECCC-CCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeHH
Confidence 4556778776432222 357899999999999 45554 244456789999988662 23333343 4555554432
Q ss_pred ------CCCCceee----------------------------ecchh------cc--------CCCCCCHHHHHHHcCCC
Q 047141 173 ------SQNPGVIT----------------------------IANTV------FG--------SNPAIADDLLAKAFQVD 204 (215)
Q Consensus 173 ------s~~pg~~~----------------------------~~~~~------f~--------~~p~~p~~vla~af~~~ 204 (215)
.++|.... ++..+ ++ -..+++.+.||...|++
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~s 180 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTT 180 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 13453211 01000 01 01248899999999999
Q ss_pred HHHHHHhhhc
Q 047141 205 KSVVGQLQTK 214 (215)
Q Consensus 205 ~~~v~~lk~~ 214 (215)
++++.++.++
T Consensus 181 r~tvsR~l~~ 190 (220)
T 2fmy_A 181 RQTVSVLLND 190 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998877554
No 199
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=76.22 E-value=4.9 Score=31.48 Aligned_cols=53 Identities=13% Similarity=0.162 Sum_probs=34.2
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
.....+++|...-.--. ....+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 33 ~~~~~~~~g~~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGD-IPNNLFYLYEGKIKILREGVYG-RFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEECTTC-CCCEEEEEEESCEEEEC------CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCC-CCCeEEEEEeCEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 34556788876432222 2578999999999997765542 44456789999987
No 200
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=75.54 E-value=5.6 Score=30.93 Aligned_cols=53 Identities=19% Similarity=0.283 Sum_probs=37.0
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+++|...-..-.+ +..+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENG-KTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEe
Confidence 345567888765332223 578999999999998776552 44456789999987
No 201
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=75.36 E-value=8.3 Score=31.08 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=37.5
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
....+++|...-.--- ....+++|++|.+.+...+.++ .+.....+.+||++-
T Consensus 70 ~~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIG 122 (260)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEECEEEEEEECTTC-CEEEEEEEETTCEES
T ss_pred EEEEECCCCEEECCCC-cCCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEEe
Confidence 4556788876422222 2578999999999998876652 444567899999884
No 202
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=75.26 E-value=7.7 Score=30.83 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=38.2
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
+....+++|...-.--- ....+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~ly~v~~G~v~~~~~~~~G-~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 43 PVVETFERNKTIFFPGD-PAERVYFLLKGAVKLSRVYEAG-EEITVALLRENSVFG 96 (243)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTC-CEEEEEEECTTCEES
T ss_pred heeEEECCCCEEEcCCC-CCceEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEc
Confidence 34566888876532222 2578999999999998877652 445567899999873
No 203
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=73.92 E-value=8.4 Score=29.64 Aligned_cols=52 Identities=13% Similarity=0.069 Sum_probs=36.5
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|...-..-. ....+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 27 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNM-DCTGLLLVKSGQLRTYILSDEG-REITLYRLFDMDMC 78 (220)
T ss_dssp EEEEECTTCEEEEGGG-CCCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEE
T ss_pred ceEEeCCCCEEECCCC-CcceEEEEEeceEEEEEECCCC-CEEEEEecCCCCee
Confidence 3456777776432222 3578999999999998876652 44456788999996
No 204
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=73.15 E-value=19 Score=27.88 Aligned_cols=70 Identities=14% Similarity=0.091 Sum_probs=43.8
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
....+++|...-.--.+ +..+++|++|.+.+. .+.+ +.+.....+.+||++- ....+..... +++.++.+
T Consensus 24 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~-G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i 93 (222)
T 1ft9_A 24 RSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGE-EREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFA 93 (222)
T ss_dssp EEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEET-TEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEE
T ss_pred cEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCC-CCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEE
Confidence 45567788764322223 578999999999995 5554 2344567899999987 3333444443 45555543
No 205
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=73.09 E-value=7.1 Score=29.88 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=42.9
Q ss_pred EEEcCCcccCCccCCCC--cEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEE----cCCCeEEEEeCCCCcEEEEE
Q 047141 96 IDYAPWGVVPPHVHPRA--TEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVF----PVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 96 ~~l~pgg~~ppH~Hp~a--~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~----P~G~~H~~~N~g~~~a~~i~ 169 (215)
..+++|...-..-.+ . ..+.+|++|.+.+...+++| .+.....+.+||++-. .....+.... .+++.++.
T Consensus 8 ~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~ 83 (202)
T 2zcw_A 8 VSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEEG-NALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEP 83 (202)
T ss_dssp EEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTTS-CEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEE
T ss_pred EEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCCC-cEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEE
Confidence 456777654222122 4 56899999999998776552 4445678999998743 1122333333 34566655
Q ss_pred E
Q 047141 170 G 170 (215)
Q Consensus 170 ~ 170 (215)
+
T Consensus 84 i 84 (202)
T 2zcw_A 84 L 84 (202)
T ss_dssp C
T ss_pred E
Confidence 5
No 206
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=73.09 E-value=37 Score=27.81 Aligned_cols=150 Identities=16% Similarity=0.241 Sum_probs=86.9
Q ss_pred CCCCCccchhhhccccCCCCccCCCCceEEEeeeccCC------CCCcccEEEEEEEEcCCcccCCccCC-CCcEEEEEE
Q 047141 47 DPKLAQADHFVFSGLHVAGNTSNPLGSRVTPVTVAQIP------GLNTLGIALARIDYAPWGVVPPHVHP-RATEILTVI 119 (215)
Q Consensus 47 ~~~~~~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~P------~l~~lgvs~~~~~l~pgg~~ppH~Hp-~a~Ei~yVl 119 (215)
.+...++++++=.+ +-. ..+.||..+........ +-+ .-.+..+.-+.+|.. -|||. ++.|+.+..
T Consensus 15 ~~~~~ta~~lI~~L-~L~---PHPEGG~yrEt~Rs~~~v~~~~~~~R-~~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h 87 (225)
T 3m3i_A 15 APPQNTAEFWIKRL-QLV---PHPEGGYYSEVVRSAHKVDNEEGNRR-HAYTTIYFLCTPESP--SHLHRLCSDETWMYH 87 (225)
T ss_dssp ---CCCHHHHHHHT-TCE---ECTTSSEEEEEEECSSEEECTTSCEE-ESCEEEEEEECSSSC--EEEEECSSEEEEEEE
T ss_pred CCCCCCHHHHHHHC-CCc---cCCCCceEEEEEECCCcccCCCCCCc-ccceeEEEEecCCCC--cccEEecCCEEEEEE
Confidence 34456777776543 111 24678877777665431 111 113455556788875 46663 689999999
Q ss_pred EcE-EEEEEEecCCC--------------------------CceEEEEec----CCc--EEEEcCCCeEEEEeCCCC---
Q 047141 120 EGS-LEVGFVTSNPD--------------------------NRLISKVLQ----KGD--VFVFPVGLIHFQRNVGHG--- 163 (215)
Q Consensus 120 ~G~-~~~~~~~~~~~--------------------------~k~~~~~L~----~GD--v~v~P~G~~H~~~N~g~~--- 163 (215)
.|. +++.+..+++. .+..+.+|. +|+ -++||+|.....+..+++
T Consensus 88 ~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~ 167 (225)
T 3m3i_A 88 AGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADG 167 (225)
T ss_dssp EESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTC
T ss_pred CCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCc
Confidence 998 67877776520 034455563 466 679999998887766543
Q ss_pred --cEEEEEEEcCCCCceeeecchhccCCCCCCHHHHHHHcCCCHHHHHHh
Q 047141 164 --NAFSISGLSSQNPGVITIANTVFGSNPAIADDLLAKAFQVDKSVVGQL 211 (215)
Q Consensus 164 --~a~~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~l 211 (215)
...+++.. =.||+..-. |.- .+.+-|.+.|.--++.|++|
T Consensus 168 ~~~~sLVsCt--VaPGFdF~D---Fel---~~~~~L~~~~P~~~~~I~~l 209 (225)
T 3m3i_A 168 QAGYSLVSCI--VSPGFDYRD---FEI---FTQAQLMELYPQHEAVIKQM 209 (225)
T ss_dssp SSSCEEEEEE--EESCCCGGG---CEE---CBHHHHHHHCGGGHHHHHHH
T ss_pred CCCeEEEEEE--EcCCccchh---cEe---cCHHHHHHHCchHHHHHHHh
Confidence 33444322 135543322 333 55666777776666777776
No 207
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=72.88 E-value=8.5 Score=30.59 Aligned_cols=53 Identities=11% Similarity=0.119 Sum_probs=37.1
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
....+++|...-.---+ +..+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 33 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 33 LIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDG-SEKLLYYAGGNSLIG 85 (250)
T ss_dssp EEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred eEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEe
Confidence 44567777754322223 578999999999998876652 444567899999884
No 208
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=72.86 E-value=11 Score=30.41 Aligned_cols=54 Identities=20% Similarity=0.242 Sum_probs=37.1
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|..+-..-.+ +..+.+|++|++.+.....+++.......+.+||+|
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 455677888765433233 678999999999997655432123456789999988
No 209
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=70.80 E-value=3.3 Score=36.80 Aligned_cols=23 Identities=17% Similarity=0.080 Sum_probs=20.1
Q ss_pred eEEEEecCCcEEEEcCCCeEEEE
Q 047141 136 LISKVLQKGDVFVFPVGLIHFQR 158 (215)
Q Consensus 136 ~~~~~L~~GDv~v~P~G~~H~~~ 158 (215)
+....|++||.+++|+|.+|..-
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 44678999999999999999973
No 210
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=67.34 E-value=9.1 Score=33.31 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=29.0
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 135 RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 135 k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
.++..+=++||.+++++|..|+..|.|-.-.+..-+
T Consensus 277 Pvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~ 312 (332)
T 2xxz_A 277 PVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNV 312 (332)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred CeEEEEECCCCEEEECCCceEEEEecceeeEEEEEe
Confidence 456788899999999999999999999755544433
No 211
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=66.68 E-value=14 Score=29.04 Aligned_cols=71 Identities=7% Similarity=-0.009 Sum_probs=42.3
Q ss_pred EEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcC---CC----eEEEEeCCCCcEEEE
Q 047141 96 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPV---GL----IHFQRNVGHGNAFSI 168 (215)
Q Consensus 96 ~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~---G~----~H~~~N~g~~~a~~i 168 (215)
..+++|...-. --..+..+.+|++|.+.+...+.+| .+.....+ +||++-... +. .+...... +++.++
T Consensus 21 ~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 21 KQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENG-TIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp EEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTS-CEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCC-CEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 45667765422 1223578999999999998876652 33344556 899885542 22 34444443 455555
Q ss_pred EE
Q 047141 169 SG 170 (215)
Q Consensus 169 ~~ 170 (215)
.+
T Consensus 97 ~i 98 (238)
T 2bgc_A 97 VI 98 (238)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 212
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=66.25 E-value=17 Score=26.13 Aligned_cols=49 Identities=29% Similarity=0.364 Sum_probs=32.5
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVF 149 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~ 149 (215)
....+.+|...-.- ...+..+.+|++|.+++.. . ++ ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~---~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQ--D---DE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEE--T---TE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEE--C---CE-EEEEecCCCEeCc
Confidence 34566777654222 2235799999999999865 2 22 4678999998743
No 213
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=66.15 E-value=59 Score=27.32 Aligned_cols=81 Identities=9% Similarity=0.010 Sum_probs=50.9
Q ss_pred EEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEE-EEEEEcEEEEEEEecCCCCceEEEEe--cC--------
Q 047141 75 VTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEI-LTVIEGSLEVGFVTSNPDNRLISKVL--QK-------- 143 (215)
Q Consensus 75 v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~k~~~~~L--~~-------- 143 (215)
+..++.+.- ++.- +.+..++|++|.......-. .|+ ++.+.|++++.+. ++ ++.+ +.
T Consensus 16 ~~~itp~~a-~~~y--~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~~-----g~--~~~~~g~R~svF~~~~ 83 (270)
T 2qjv_A 16 IQHISPQNA-GWEY--VGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXAA-----DS--FFYRIGQRMSPFERIP 83 (270)
T ss_dssp EEEECHHHH-TSSS--CEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEET-----TE--EEEEECCCSSGGGCSC
T ss_pred EEEeCCCCC-CcEE--eEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEEC-----CE--EEeccccccccccCCC
Confidence 555554332 2332 57788889999876666543 465 5566899999872 33 3433 22
Q ss_pred CcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 144 GDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 144 GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.|++++|+|.--.+...+ ++++..
T Consensus 84 p~~lYvp~g~~v~i~a~~--~~~~~v 107 (270)
T 2qjv_A 84 AYSVYLPHHTEAXVTAET--DLELAV 107 (270)
T ss_dssp CCEEEECSSCCEEEEESS--SEEEEE
T ss_pred CcEEEECCCCEEEEEecC--CceEEE
Confidence 499999999955555544 455543
No 214
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=66.03 E-value=13 Score=28.43 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=34.1
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.||..+-.--. .+..+.+|++|++.+.. ++ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~~~~--~~--g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGT-FGDRMFFIQQGIVDIIM--SD--GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTS-CCSEEEEEEECCEEEEC--TT--SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCC-cCcEEEEEEeCEEEEEe--cC--Ce-EEEEecCCCEe
Confidence 45566788876532222 35789999999999865 33 44 46789999987
No 215
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=64.00 E-value=12 Score=28.65 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=32.4
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.||..+-..-.+ +.++.+|++|++.+.. .+ ++ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~--g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KG--NK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TT--SC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CC--Ce--EEEEcCCCEe
Confidence 345567888765332233 5789999999999842 33 44 3578999987
No 216
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=61.59 E-value=24 Score=25.52 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=32.9
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|..+-.- ...+..+.+|++|.+.+.. + ++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~---~--~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYV---N--NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESCEEEEE---T--TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEE---C--CE-EEEEecCCCEe
Confidence 344667888764322 2236889999999999875 2 34 35679999986
No 217
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=61.19 E-value=17 Score=30.18 Aligned_cols=51 Identities=22% Similarity=0.168 Sum_probs=35.2
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|..+-.- -..+..+.+|++|.+.+...+.+ ++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQ-GEPAVSFLLISSGSAEVSHVGDD--GVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECT-TSBCCCEEEEEECCEEEEEECTT--CCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeC-CCcCCEEEEEEeeEEEEEEECCC--CcEEEEEecCCCEe
Confidence 34567777653221 12257799999999999877665 34357789999987
No 218
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=60.40 E-value=59 Score=25.43 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=79.6
Q ss_pred CCC-CceEEEeeeccC----CCCC--cccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcE-EEEEEEecCCCCceEEEE
Q 047141 69 NPL-GSRVTPVTVAQI----PGLN--TLGIALARIDYAPWGVVPPHVHPRATEILTVIEGS-LEVGFVTSNPDNRLISKV 140 (215)
Q Consensus 69 ~~~-g~~v~~~~~~~~----P~l~--~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~k~~~~~ 140 (215)
.+. ||..+....... +... ....+..+.-+.+|....+|.- ++.|+-+-..|. +++.+..++ ++..+..
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~d--G~~~~~~ 100 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRSVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPD--GSYSCSI 100 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTT--SCEEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCcccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCC--CceEEEE
Confidence 456 777777665531 1111 1123555566788874444433 589999999996 688888775 5555665
Q ss_pred ec----CCc---EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeecchhccCCCCCCHHHHHHHcCCCHHHHHHhh
Q 047141 141 LQ----KGD---VFVFPVGLIHFQRNVGHGNAFSISGLSSQNPGVITIANTVFGSNPAIADDLLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 141 L~----~GD---v~v~P~G~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~p~~vla~af~~~~~~v~~lk 212 (215)
|. +|+ -++||+|.....+. | ...+++.. =.||+..-. |.- .+.+-|.+.|.--++.|++|-
T Consensus 101 LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 101 LGNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKD---FSL---GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp ESCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGG---CEE---CCHHHHHHHCGGGHHHHHHTS
T ss_pred eCCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchh---cEE---cCHHHHHHHCchHHHHHHHhc
Confidence 54 577 78999999887766 2 33333322 245543322 333 466677777776677777763
No 219
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=60.24 E-value=56 Score=25.13 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=59.4
Q ss_pred CCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcE-EEEEEEecCCCCceEEEEe----cC
Q 047141 69 NPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGS-LEVGFVTSNPDNRLISKVL----QK 143 (215)
Q Consensus 69 ~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~k~~~~~L----~~ 143 (215)
.+.||..+........+-+.. .+..+.-+.+|....+|--.++.|+-+-..|. +++.+..++ +...+.+| .+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~~-~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~d--g~~~~~~LG~d~~~ 95 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERGH-STAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDG--REVQTFTLGPAILE 95 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTCS-CEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSS--SCCEEEEESSCTTT
T ss_pred CCCCccEEEEEeCCCCCCCcc-eeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCC--CcEEEEEeCCCccc
Confidence 467888888776654332222 34555557777655444432589999999998 777777664 34445555 45
Q ss_pred Cc--EEEEcCCCeEEEEeCC
Q 047141 144 GD--VFVFPVGLIHFQRNVG 161 (215)
Q Consensus 144 GD--v~v~P~G~~H~~~N~g 161 (215)
|+ -++||+|.....+..|
T Consensus 96 Ge~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 96 GERPQVIVPANCWQSAESLG 115 (154)
T ss_dssp TEESEEEECTTCEEEEEESS
T ss_pred CcccEEEEcCCEEEEeeECC
Confidence 66 4899999998887654
No 220
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=59.96 E-value=7.1 Score=35.22 Aligned_cols=23 Identities=17% Similarity=0.085 Sum_probs=19.8
Q ss_pred EEEEecCCcEEEEcCCCeEEEEe
Q 047141 137 ISKVLQKGDVFVFPVGLIHFQRN 159 (215)
Q Consensus 137 ~~~~L~~GDv~v~P~G~~H~~~N 159 (215)
....|++||.+++|+|.+|....
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCC
Confidence 35679999999999999998743
No 221
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=59.88 E-value=20 Score=28.00 Aligned_cols=67 Identities=13% Similarity=0.050 Sum_probs=48.0
Q ss_pred cCCccCCCCcEEEEEEEcEEEEEEEecCCC----CceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 104 VPPHVHPRATEILTVIEGSLEVGFVTSNPD----NRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 104 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
...=.||.++|.+.-+.|...+-++.++++ +++..+....|+.+.+-+|+.|.-.-.-+++..++.+
T Consensus 69 ~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 69 HELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred eEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 344568888999999999876555554311 3456889999999999999999864443455666644
No 222
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=59.53 E-value=28 Score=24.52 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=32.1
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+.+|..+-.- ...+..+.+|++|++.+.- + ++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~--g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---E--GV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---T--TE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---C--CE-EEEEeCCCCEe
Confidence 44667777754222 2236889999999999833 2 34 45788999986
No 223
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=58.20 E-value=27 Score=27.43 Aligned_cols=67 Identities=10% Similarity=-0.046 Sum_probs=48.0
Q ss_pred cCCccCCCCcEEEEEEEcEEEEEEEecCCC----CceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 104 VPPHVHPRATEILTVIEGSLEVGFVTSNPD----NRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 104 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~----~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
...=.||.++|.+.-+.|...+-++.++++ .++..+....|+.+.+-+|+.|.-.-.-+++..++.+
T Consensus 71 ~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vv 141 (175)
T 2bdr_A 71 RMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp CEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred eEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEE
Confidence 345568888999999999876656555421 3567899999999999999999653333345555543
No 224
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=57.47 E-value=21 Score=29.04 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=35.3
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEe-cCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVT-SNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~-~~~~~k~~~~~L~~GDv~ 147 (215)
....+.+|..+-.- -..+..+.+|++|++.+.... .+ +.......+.+||+|
T Consensus 181 ~~~~~~~g~~I~~~-G~~~~~~yiI~~G~v~~~~~~~~~-g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQ-GARGDTFFIISKGKVNVTREDSPN-EDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECT-TCEECEEEEEEESEEEEEECCSSS-CCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeC-CCCCCEEEEEEeeEEEEEEecCCC-CcceEEEEcCCCCEe
Confidence 45567777654222 223578999999999998765 23 234456789999987
No 225
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=57.34 E-value=40 Score=28.67 Aligned_cols=66 Identities=11% Similarity=0.015 Sum_probs=40.2
Q ss_pred EEEcCCcccCCccCCCCcEEEEE-EEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeC-C-CCcEEEE
Q 047141 96 IDYAPWGVVPPHVHPRATEILTV-IEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNV-G-HGNAFSI 168 (215)
Q Consensus 96 ~~l~pgg~~ppH~Hp~a~Ei~yV-l~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~-g-~~~a~~i 168 (215)
+.|+.|....-.+--...|+.+| +.|++++.+. ++ ++.|.+-|.+++|+|.-...... . ..++++.
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vd-----g~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEID-----GA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEEC-----CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 45555544433322334776555 5789998772 34 56899999999999976444332 2 3445544
No 226
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=57.13 E-value=16 Score=33.74 Aligned_cols=35 Identities=17% Similarity=0.375 Sum_probs=28.5
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEE
Q 047141 135 RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSIS 169 (215)
Q Consensus 135 k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~ 169 (215)
.++..+=++||.+++++|..||.+|.|-.-.+.+-
T Consensus 336 Pvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN 370 (531)
T 3avr_A 336 PVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWN 370 (531)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEE
T ss_pred CeEEEEECCCCEEEECCCceEEEEecceeeeeEEE
Confidence 34578889999999999999999999975544443
No 227
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=57.10 E-value=4.8 Score=31.27 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=35.4
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFA 85 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGG-CCBCCCEECTTEEES
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEee
Confidence 34556777654322233 578999999999987765542 333456789999874
No 228
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=55.27 E-value=12 Score=34.36 Aligned_cols=85 Identities=19% Similarity=0.217 Sum_probs=53.2
Q ss_pred eccCCCCCcccEEEEEEEEcCCcccCCccCC-CCcEEEEEEEcEEEEEEEecCC--------------------------
Q 047141 80 VAQIPGLNTLGIALARIDYAPWGVVPPHVHP-RATEILTVIEGSLEVGFVTSNP-------------------------- 132 (215)
Q Consensus 80 ~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp-~a~Ei~yVl~G~~~~~~~~~~~-------------------------- 132 (215)
....||+|+--+.+. .+|...++|.=. .-.-+-|-+-|.-.+.+.-+..
T Consensus 228 ~~~I~GVNtpqLYig----m~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~pspe 303 (510)
T 4ask_A 228 GHTILGMNTVQLYMK----VPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILD 303 (510)
T ss_dssp SSCCTTTTSCEEEEE----CTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCHH
T ss_pred CCcCCCcChhheEEc----cccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccCCHH
Confidence 356788887644443 477777877522 1234556565543332322210
Q ss_pred -----CCceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEE
Q 047141 133 -----DNRLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSI 168 (215)
Q Consensus 133 -----~~k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i 168 (215)
+=.++..+=++||.+++++|..||.+|.|-..-+..
T Consensus 304 ~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaW 344 (510)
T 4ask_A 304 DLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 344 (510)
T ss_dssp HHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred HHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEE
Confidence 123457888999999999999999999997444433
No 229
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=52.88 E-value=22 Score=27.36 Aligned_cols=49 Identities=27% Similarity=0.261 Sum_probs=33.6
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v 148 (215)
+....+.||..+-.---+ +.++.+|++|++.+.. + +. ....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~---~--~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLK---D--NT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEES---S--SC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEE---C--Ce-EEEEecCCCCcC
Confidence 345567888764322222 5899999999999864 2 32 367899999884
No 230
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=51.72 E-value=37 Score=29.60 Aligned_cols=52 Identities=6% Similarity=-0.021 Sum_probs=35.9
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|..+--.-.+ +..+++|++|++.+.. ..+ +.......+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~-~~~-G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYV-KCD-GVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEE-ECS-SCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEE-ecC-CCEEEEEEecCCCEE
Confidence 445677888765333333 5889999999999877 333 234456789999976
No 231
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=48.11 E-value=34 Score=29.78 Aligned_cols=56 Identities=16% Similarity=0.039 Sum_probs=37.4
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCC-ceEEEEecCCcEEEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDN-RLISKVLQKGDVFVF 149 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-k~~~~~L~~GDv~v~ 149 (215)
+....+.+|..+-. -...+..+++|++|++.+...+.++.. ......+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~-~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFR-QGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEe-CCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 34557888875422 222357899999999999876654211 245788999998843
No 232
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=47.90 E-value=22 Score=24.98 Aligned_cols=47 Identities=11% Similarity=0.184 Sum_probs=30.8
Q ss_pred EEEEEc-CCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYA-PWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~-pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+. +|..+- +-...+..+.+|++|++.+.. .+ ++ ...+.+||++
T Consensus 40 ~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~--~~--g~--~~~l~~G~~f 87 (134)
T 2d93_A 40 IFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISH--PD--GK--VENLFMGNSF 87 (134)
T ss_dssp EEEEECSSSCEEE-CTTCEECEEEECCBSCEEEEC--SS--SC--EEEECTTCEE
T ss_pred eEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEc--CC--Cc--EEEecCCCcc
Confidence 445677 776532 222335678999999999863 33 44 2679999976
No 233
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=47.56 E-value=52 Score=24.79 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=39.9
Q ss_pred cCCccCCCCcEEEEEEEcEEEEEEEecCC-------------------CCceEEEEecCCcEEEEcCCCeEEEE
Q 047141 104 VPPHVHPRATEILTVIEGSLEVGFVTSNP-------------------DNRLISKVLQKGDVFVFPVGLIHFQR 158 (215)
Q Consensus 104 ~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~-------------------~~k~~~~~L~~GDv~v~P~G~~H~~~ 158 (215)
..+=.|.+=..+-|+++|+-++++..... +.......|++|+..+|-++-+|.-.
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccc
Confidence 45666777789999999998888764210 01112467899999999999999863
No 234
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=43.71 E-value=28 Score=26.92 Aligned_cols=47 Identities=11% Similarity=0.100 Sum_probs=32.1
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|..+-.--.+ +..+.+|++|++.+.. + ++. ...+.+||.+
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~---~--~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYV---N--DNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEES---T--TSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEE---C--CEE-EEecCCCCee
Confidence 35567777654322233 6899999999999864 2 232 4789999988
No 235
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=43.60 E-value=29 Score=24.22 Aligned_cols=45 Identities=24% Similarity=0.282 Sum_probs=30.3
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|...-.--.+ ...+.+|++|.+.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~-----~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP-----N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS-----S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC-----C---cceECCCCEe
Confidence 44567888765332233 57899999999998542 2 2468888876
No 236
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=43.39 E-value=51 Score=26.32 Aligned_cols=47 Identities=15% Similarity=0.256 Sum_probs=33.3
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+++|..+-..-. .+..+.+|++|++.+.. + ++ ....+.+||.+
T Consensus 63 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~--g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 63 FPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---N--NE-WATSVGEGGSF 109 (291)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEECCEEEEE---T--TE-EEEEECTTCEE
T ss_pred cEEEECCCCEEEeCCC-CCceEEEEeeeEEEEEE---C--Ce-EEEEcCCCCcc
Confidence 4566788876533223 36889999999999866 2 33 36789999987
No 237
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=42.72 E-value=35 Score=29.26 Aligned_cols=51 Identities=14% Similarity=0.142 Sum_probs=32.9
Q ss_pred EEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 96 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 96 ~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
..+.+|..+-.- -..+..+.+|++|++.+.....+++.......+.+||.|
T Consensus 274 ~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 345666543222 223678999999999997754432123346789999987
No 238
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=39.61 E-value=53 Score=26.45 Aligned_cols=48 Identities=15% Similarity=0.210 Sum_probs=33.3
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|..+--.-.+ +..+.+|++|++++.. + ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~---~--g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---E--GV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE---T--TE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE---C--CE-EEEEeCCCCee
Confidence 345677888765333333 5789999999999833 2 33 36789999987
No 239
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=36.70 E-value=52 Score=25.31 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=32.0
Q ss_pred EEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 94 ARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
....+.+|..+-.-- ..+..+.+|.+|++++...+ .. ....+.+||++
T Consensus 149 ~~~~~~~g~~i~~~g-~~~~~~y~I~~G~v~v~~~~----~~-~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREG-DQGENFYLIEYGAVDVSKKG----QG-VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTT-SBCCEEEEEEECEEEEEETT----TE-EEEEEETTCEE
T ss_pred heEEeCCCCEEEeCC-CcCCEEEEEEecEEEEEEcC----Cc-eEEEcCCCCcc
Confidence 445677777543222 23688999999999986532 22 35788999976
No 240
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=33.30 E-value=11 Score=26.67 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=27.6
Q ss_pred EEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEE--EecCCcEE
Q 047141 97 DYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISK--VLQKGDVF 147 (215)
Q Consensus 97 ~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~--~L~~GDv~ 147 (215)
.+++|..+-. -...+..+.+|++|++++. ...++ .+.... .+.+||++
T Consensus 33 ~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~-~~~~g-~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 33 LFTEKSYLVR-EGDPVNEMLFIIRGRLESV-TTDGG-RSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CBCTTEEEEC-TTSBCSEEEEEEECCCEEE-CCSSC-SSSSSCEEECCTTCBS
T ss_pred EeCCCCEEEe-CCCCCCeEEEEEeeEEEEE-EcCCC-cceeeeeeeecCCCEe
Confidence 3455544321 1223578999999999964 33331 222223 78899965
No 241
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=32.05 E-value=71 Score=27.77 Aligned_cols=54 Identities=11% Similarity=0.142 Sum_probs=33.0
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecC-----CCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSN-----PDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~-----~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|..+-.- -..+..+++|++|++.+.....+ .+.......+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~e-Gd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQ-GDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 345567777754222 22368899999999998765431 0123346789999977
No 242
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=30.24 E-value=84 Score=25.02 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=26.8
Q ss_pred CcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCC
Q 047141 112 ATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVG 152 (215)
Q Consensus 112 a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G 152 (215)
..-++|+++|++.+...+ ++ ...|.+||.+++-..
T Consensus 140 ~~~~v~~l~G~~~v~~~~----~~--~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQG----QP--RGQLAAHDCLCAEGL 174 (200)
T ss_dssp SEEEEEESSSCEEEEETT----EE--EEEECTTCEEEEESC
T ss_pred CEEEEEEccCcEEEEcCC----Cc--eeecCCCCEEEEeCC
Confidence 467899999999986521 22 688999999998654
No 243
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=29.26 E-value=2.9e+02 Score=24.20 Aligned_cols=43 Identities=16% Similarity=0.016 Sum_probs=36.2
Q ss_pred cEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEE
Q 047141 113 TEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQR 158 (215)
Q Consensus 113 ~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~ 158 (215)
.--..|++|++++.+..++ +.....|+++|..++-+-+.|.+.
T Consensus 355 e~hY~v~~G~lTL~W~~~d---Gt~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 355 ENHYVVTEGRLTLEWDGPD---GPASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEEEEESCEEEEEEETT---EEEEEEECTTCEEEECTTCCEEEE
T ss_pred cceEEEecCceEEEecCCC---CccceEECCCCceeeccccccccc
Confidence 4445688999999997664 447899999999999999999996
No 244
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=25.57 E-value=1.4e+02 Score=21.04 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=26.2
Q ss_pred CCcccCCccCCCC-cEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEEEEcCC
Q 047141 100 PWGVVPPHVHPRA-TEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVG 152 (215)
Q Consensus 100 pgg~~ppH~Hp~a-~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G 152 (215)
.||+.-|-....- .+=-.|--|.+.. ..+ ++.....++.||.++|++|
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~--G~~~p~~VkvGD~Vlf~k~ 70 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI---LEN--GEVKPLDVKVGDIVIFNDG 70 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC---TTS--SSCEECSCCTTCEEEECCC
T ss_pred cceEEeCcccccCCcccEEEEEcCcee---cCC--CCEEecccCCCCEEEECCc
Confidence 4565544333222 2222333355542 222 4444667999999999993
No 245
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=25.26 E-value=1.4e+02 Score=29.07 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=51.4
Q ss_pred CCCCCCccch--hhhccccCCCCccCCCCceEEEeeeccCCCCCcccEEEEEEEEcCCcccCCccCCCCcEEEEEEEcEE
Q 047141 46 MDPKLAQADH--FVFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGIALARIDYAPWGVVPPHVHPRATEILTVIEGSL 123 (215)
Q Consensus 46 k~~~~~~~~d--F~f~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~lgvs~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~ 123 (215)
|+|+.=|.+| +.|+.+..-.-..+- .. +.+..+--.+....+++|..+---=.+ ++.+++|++|++
T Consensus 27 K~p~~Rt~edl~~I~~~Lk~~~~f~~l--------~~---~~l~~l~~~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV 94 (999)
T 4f7z_A 27 KRPLERSSEDVDIIFTRLKGVKAFEKF--------HP---NLLRQICLCGYYENLEKGITLFRQGDI-GTNWYAVLAGSL 94 (999)
T ss_dssp SCSSSCCHHHHHHHHHHHTTCTTTTTC--------CH---HHHHHHHHHCEEEEECTTCEEECTTSC-CCEEEEEEESEE
T ss_pred CCcccCCHHHHHHHHHHHhCCHhhhcC--------CH---HHHHHHHhheEEEEECCCCEEEcCCCc-CCEEEEEEeeEE
Confidence 5666666665 666665432222111 11 122222224566677887754222244 689999999999
Q ss_pred EEEEEecCC-CCceEEEEecCCcEE
Q 047141 124 EVGFVTSNP-DNRLISKVLQKGDVF 147 (215)
Q Consensus 124 ~~~~~~~~~-~~k~~~~~L~~GDv~ 147 (215)
.+.+.++++ +.......+.+||.|
T Consensus 95 ~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 95 DVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp EEEECSSSCTTSCEEEEEEETTCEE
T ss_pred EEEEecCCCCCCceeEEEecCCcch
Confidence 998754321 123345789999987
No 246
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=24.77 E-value=92 Score=25.26 Aligned_cols=29 Identities=14% Similarity=0.352 Sum_probs=23.4
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEE-eCCCC
Q 047141 135 RLISKVLQKGDVFVFPVGLIHFQR-NVGHG 163 (215)
Q Consensus 135 k~~~~~L~~GDv~v~P~G~~H~~~-N~g~~ 163 (215)
+.....+++||++++...++|.-. |.++.
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~ 255 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDR 255 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSS
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCC
Confidence 345788999999999999999874 65543
No 247
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=23.55 E-value=2.8e+02 Score=22.09 Aligned_cols=146 Identities=13% Similarity=0.068 Sum_probs=80.8
Q ss_pred CCccchhhhccccCCCCccCCCCceEEEeeeccC----CC--CC---------cccEEEEEEEEcCCc-ccCCccCCCCc
Q 047141 50 LAQADHFVFSGLHVAGNTSNPLGSRVTPVTVAQI----PG--LN---------TLGIALARIDYAPWG-VVPPHVHPRAT 113 (215)
Q Consensus 50 ~~~~~dF~f~~~~~~~~~~~~~g~~v~~~~~~~~----P~--l~---------~lgvs~~~~~l~pgg-~~ppH~Hp~a~ 113 (215)
..++++++=.+ +- ...+.||..+....... +. +. ..-.+..+.-+.++. ...+|-- ++.
T Consensus 27 ~~~a~~lI~~L-~L---~PHPEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv-~sd 101 (203)
T 1xe7_A 27 PSSLQQLINDW-QL---IKHREGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKN-INR 101 (203)
T ss_dssp CHHHHHHHHHH-TC---EECTTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEE-SSC
T ss_pred CCCHHHHHHHc-CC---ccCCCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceee-CCC
Confidence 55667765443 11 12467888877665432 11 11 011344555567775 3444443 589
Q ss_pred EEEEEEEcEEEEEEEecCCCCceEEEEecC----Cc--EEEEcCCCeEEEEeC-CCCcE--EEEEEEcCCCCceeeecch
Q 047141 114 EILTVIEGSLEVGFVTSNPDNRLISKVLQK----GD--VFVFPVGLIHFQRNV-GHGNA--FSISGLSSQNPGVITIANT 184 (215)
Q Consensus 114 Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~----GD--v~v~P~G~~H~~~N~-g~~~a--~~i~~~~s~~pg~~~~~~~ 184 (215)
|+-+-..|.....+..++ ++..+.+|.+ |+ -++||+|.....+.. +.+-. .+++.. =.||+..-.
T Consensus 102 EiW~~h~G~p~~~li~~d--g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCt--VaPGFdF~d-- 175 (203)
T 1xe7_A 102 IIHILQRGKGQYVLVYPD--GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEV--VVPGFDFED-- 175 (203)
T ss_dssp EEEEEEEECEEEEEECTT--SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEE--ESSCCCGGG--
T ss_pred EEEEEEcCCccEEEEcCC--CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEE--ecCCccchh--
Confidence 999999996555566554 4555566654 54 589999999887654 22221 333322 245654332
Q ss_pred hccCCCCCCHH-HHHHHcCCCHHHHHHhh
Q 047141 185 VFGSNPAIADD-LLAKAFQVDKSVVGQLQ 212 (215)
Q Consensus 185 ~f~~~p~~p~~-vla~af~~~~~~v~~lk 212 (215)
|.- .+.+ -|.+.|. ++.++.|+
T Consensus 176 -Fel---~~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 176 -HTF---LKGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp -EEE---CCHHHHHHHHHC--HHHHHHTG
T ss_pred -cEe---cCCcHHHHHHCC--HHHHHHHH
Confidence 332 4455 5555554 67777765
No 248
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=23.25 E-value=72 Score=27.25 Aligned_cols=48 Identities=15% Similarity=0.179 Sum_probs=33.9
Q ss_pred EEEEEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 93 LARIDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
+....+.+|..+-.--.+ +..+.+|++|++.+.. + ++ ....+.+||+|
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~---~--~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYV---N--GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEE---T--TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEE---C--Ce-EeeeCCCCCEE
Confidence 455678888765443333 6889999999999875 2 34 35678999876
No 249
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=22.90 E-value=1.6e+02 Score=25.25 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=31.7
Q ss_pred EEEcCCcccCCccCCCCcEEEEEEEcEEEEEEEecCCCCceEEEEecCCcEE
Q 047141 96 IDYAPWGVVPPHVHPRATEILTVIEGSLEVGFVTSNPDNRLISKVLQKGDVF 147 (215)
Q Consensus 96 ~~l~pgg~~ppH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~k~~~~~L~~GDv~ 147 (215)
..+.+|..+-.--. .+..+++|++|++.+... ++.....+.+||.|
T Consensus 364 ~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~~-----~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGE-EGTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTS-CCCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCC-cCCeEEEEEEeEEEEEEc-----CCeeEEEecCCCEE
Confidence 35777776433223 368899999999998652 22246789999976
No 250
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=22.86 E-value=87 Score=17.25 Aligned_cols=23 Identities=0% Similarity=0.086 Sum_probs=19.8
Q ss_pred CCHHHHHHHcCCCHHHHHHhhhc
Q 047141 192 IADDLLAKAFQVDKSVVGQLQTK 214 (215)
Q Consensus 192 ~p~~vla~af~~~~~~v~~lk~~ 214 (215)
++..-+|+.++++..+|.+..++
T Consensus 22 ~s~~~IA~~lgis~~Tv~~~~~~ 44 (51)
T 1tc3_C 22 VSLHEMSRKISRSRHCIRVYLKD 44 (51)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHC
T ss_pred CCHHHHHHHHCcCHHHHHHHHhh
Confidence 88889999999999999887554
No 251
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=22.56 E-value=15 Score=20.66 Aligned_cols=10 Identities=40% Similarity=0.856 Sum_probs=8.0
Q ss_pred ccCCcccCCC
Q 047141 39 RVNGLACMDP 48 (215)
Q Consensus 39 ~~~g~~ck~~ 48 (215)
.-||+-||.|
T Consensus 23 vwngfdcksp 32 (36)
T 1iyc_A 23 VWNGFDCKSP 32 (36)
T ss_dssp EEETTEEECG
T ss_pred eecCccccCc
Confidence 4589999976
No 252
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.22 E-value=43 Score=23.18 Aligned_cols=29 Identities=14% Similarity=0.402 Sum_probs=24.0
Q ss_pred cchhccCCCCCCHHHHHHHcCCCHHHHHHhhh
Q 047141 182 ANTVFGSNPAIADDLLAKAFQVDKSVVGQLQT 213 (215)
Q Consensus 182 ~~~~f~~~p~~p~~vla~af~~~~~~v~~lk~ 213 (215)
.-++|-. +++|+|..-|+++.-+++||.+
T Consensus 46 DG~lL~~---L~ee~L~edf~ls~Lq~kKi~~ 74 (84)
T 2dkz_A 46 DGNLLVQ---LTEEILSEDFKLSKLQVKKIMQ 74 (84)
T ss_dssp CHHHHHH---CCHHHHHHTSCCCHHHHHHHHH
T ss_pred chHHHHh---CCHHHHHhhcCCCHHHHHHHHH
Confidence 3456666 9999999999999999998864
No 253
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=21.69 E-value=1.2e+02 Score=25.62 Aligned_cols=50 Identities=12% Similarity=-0.015 Sum_probs=33.2
Q ss_pred CcEEEEE-EEcEEEEEEEecCCCCceEEEEecCCcEEEEcCCCeEEEEeCC--CCcEEEE
Q 047141 112 ATEILTV-IEGSLEVGFVTSNPDNRLISKVLQKGDVFVFPVGLIHFQRNVG--HGNAFSI 168 (215)
Q Consensus 112 a~Ei~yV-l~G~~~~~~~~~~~~~k~~~~~L~~GDv~v~P~G~~H~~~N~g--~~~a~~i 168 (215)
..|+.+| +.|++++.+. ++ ++.|.+-|.+++|+|.-....... ..++++.
T Consensus 78 ~rE~~iV~l~G~~~V~vd-----G~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 78 RRELGVINIGGAGTITVD-----GQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TEEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred CcEEEEEEccCeEEEEEC-----CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 4676554 5789998772 34 568999999999999854443322 2345544
No 254
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=21.55 E-value=1.6e+02 Score=25.71 Aligned_cols=36 Identities=19% Similarity=-0.008 Sum_probs=29.6
Q ss_pred ceEEEEecCCcEEEEcCCCeEEEEeCCCCcEEEEEE
Q 047141 135 RLISKVLQKGDVFVFPVGLIHFQRNVGHGNAFSISG 170 (215)
Q Consensus 135 k~~~~~L~~GDv~v~P~G~~H~~~N~g~~~a~~i~~ 170 (215)
+++..+-++||.++.-+|..|+..|.|-.-++.+-+
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNF 295 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINF 295 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccHhHhhcc
Confidence 345678899999999999999999999776666544
No 255
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=21.44 E-value=1.1e+02 Score=25.00 Aligned_cols=29 Identities=34% Similarity=0.456 Sum_probs=23.0
Q ss_pred ceEEEEecCCcEEEEcCCCeEEE-EeCCCC
Q 047141 135 RLISKVLQKGDVFVFPVGLIHFQ-RNVGHG 163 (215)
Q Consensus 135 k~~~~~L~~GDv~v~P~G~~H~~-~N~g~~ 163 (215)
......+++||++++-..++|.- .|.++.
T Consensus 214 ~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~ 243 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLLIHGSGQNKTQG 243 (308)
T ss_dssp CCEEECBCTTCEEEECTTCCEEECCBCSSS
T ss_pred CeEEccCCCccEEEECCCccccCCCCCCCC
Confidence 34578899999999999999987 454443
Done!