BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047146
(608 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/646 (37%), Positives = 380/646 (58%), Gaps = 61/646 (9%)
Query: 3 SPLTVASGS------------RYNDINTFQQLSLLHQSPRLESSKSVGQLKQFHAFIIKT 50
SPLTV S S Y+ I LSLLH L+S L+ HA +IK
Sbjct: 6 SPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQS------LRIIHAQMIKI 59
Query: 51 GSPQHQTQILYDKIISLS-RGNEIENL--------SLQNPQVYLYNFIIQCLS-NANPLE 100
G H T K+I E L ++Q P + ++N + + + +++P+
Sbjct: 60 G--LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVS 117
Query: 101 AIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMR 160
A+ LY M+ GLLPN+YT P+VLK+C +S++ + GQQ+H + +K ++YV +L+
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 161 LYAVCGLIKAVHKLFHFRQH-------------------PQAQR--------DLVSWTTL 193
+Y G ++ HK+F H AQ+ D+VSW +
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 194 IQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHF 253
I Y + EA+ F DM + N+RPD +V V+SAC++ G + LG ++H +I D+ F
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 254 NLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIF 313
++ I NALID+Y KCG + +A +F+ +P K+V+SWN++I G TH +KEAL +F
Sbjct: 298 G--SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 314 RRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDK--NHINTDGFIGNALVDMYA 371
+ M G P+D T++ +L +CA++G +++G+W+H Y+DK + + +L+DMYA
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 372 KCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVG 431
KCG I+ A VF S+ + + S+ AMI G A+HG+A + D+FS M ++GI+PD++TFVG
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 432 VLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLV 491
+LSACSH+G+++ G F M++ Y + P+ EHYGCM+DL G +GL +EA ++I M +
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535
Query: 492 PDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLR 551
PD +W +LL ACK+H VEL E ENL++ EPE G+Y+L++NIY+S RW E K R
Sbjct: 536 PDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTR 595
Query: 552 KKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEI 597
+ ++ +KK PGCS +E+ +EF GDK HP+ EIY +L+E+
Sbjct: 596 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/615 (36%), Positives = 363/615 (59%), Gaps = 51/615 (8%)
Query: 35 KSVGQLKQFHAFIIKTG---SPQHQTQILYDKIISLSR-GNEIEN-----LSLQNPQVYL 85
K+ Q KQ H+ I G +P Q ++ + SR G + + + P V +
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQKKLF---VFWCSRLGGHVSYAYKLFVKIPEPDVVV 101
Query: 86 YNFIIQCLSNAN-PLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQ-SLRVGQQVHAYS 143
+N +I+ S + E + LY ML +G+ P+++T P++L + +L G+++H +
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 144 MKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYP 203
+K L SN+YV N L+++Y++CGL+ +F R + D+ SW +I Y +M
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRR----CKEDVFSWNLMISGYNRMKEY 217
Query: 204 TEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHN 263
E+I +M + + P + L++VLSACSK+ D L ++H Y+++ P + + N
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE--CKTEPSLRLEN 275
Query: 264 ALIDMYLKCG-------------------------------NIPSARKVFDEMPVKNVVS 292
AL++ Y CG N+ AR FD+MPV++ +S
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 293 WNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLD 352
W MI G G F E+L+IFR MQ G+ PD+FT+V VL +CA++G LE+G+W+ TY+D
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 353 KNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALD 412
KN I D +GNAL+DMY KCG ++A VF M RD +++TAM+VGLA +G+ +A+
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 413 IFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLF 472
+F +M + I+PD++T++GVLSAC+H+G+V++ K F M + ++P HYGCMVD+
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 515
Query: 473 GRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYI 532
GRAGL++EA ++++ MP+ P++ VWGALLGA ++H +AE+ + ++ EP+ Y
Sbjct: 516 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 575
Query: 533 LMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYK 592
L+ NIY+ RWK+ ++R+K+ + +KKTPG SL+EV G +EF GDKSH ++ EIY
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 635
Query: 593 LLDEIMHQSKNHGYI 607
L+E+ +S Y+
Sbjct: 636 KLEELAQESTFAAYL 650
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 380/650 (58%), Gaps = 55/650 (8%)
Query: 2 ASPLTVASGSRYNDINTFQQLSLLHQSPR----LESSKSVGQLKQFHAFIIKTGS---PQ 54
A PL++ R+ + + Q + ++ R +E S+ QLKQ H +I+TG+ P
Sbjct: 7 AQPLSLP---RHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPY 63
Query: 55 HQTQIL----YDKIISLSRGNEIENLSLQNPQVYLYNFIIQC-LSNANPLEAIALYREML 109
+++ SL ++ + + P + +N +I+ S +P+ +I + +M+
Sbjct: 64 SASKLFAMAALSSFASLEYARKVFD-EIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 110 IKG-LLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLI 168
+ PN YT P+++KA + SL +GQ +H ++K+A+ S+V+V N+L+ Y CG +
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 169 KAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIV 228
+ K+F + ++D+VSW ++I +V+ P +A+ F M +++ + +V V
Sbjct: 183 DSACKVFTTIK----EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 229 LSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFD----- 283
LSAC+K+ +L G ++ YI +N N+ ++ + NA++DMY KCG+I A+++FD
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
Query: 284 --------------------------EMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQ 317
MP K++V+WN++I+ G+ EAL +F +Q
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 318 -GLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRI 376
+K + TLV L++CA +G LELG+W+H+Y+ K+ I + + +AL+ MY+KCG +
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 377 DQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSAC 436
+++ VF S++ RDV+ ++AMI GLA+HG +A+D+F +M + ++P+ VTF V AC
Sbjct: 417 EKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
Query: 437 SHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFV 496
SH GLV+E F M Y + P+ +HY C+VD+ GR+G + +A+ I++MP+ P V
Sbjct: 477 SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV 536
Query: 497 WGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKE 556
WGALLGACKIHA + LAE+ L+ EP DGA++L++NIY+ +W+ +LRK M+
Sbjct: 537 WGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRV 596
Query: 557 RKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGY 606
+KK PGCS +E+ G +EF GD +HP + ++Y L E+M + K++GY
Sbjct: 597 TGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/571 (40%), Positives = 341/571 (59%), Gaps = 56/571 (9%)
Query: 75 NLSL-QNPQVYLYNFIIQCLSNANPL-EAIALYREMLIKGLLPNTYTLPYVLKACWQSQS 132
N+SL Q P + +YN +++ L++ + +AL+ E+ +GL P+ +TLP VLK+ + +
Sbjct: 2 NMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK 61
Query: 133 LRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTT 192
+ G++VH Y++K L + YV N+LM +YA G I+ HK+F + PQ RD+VSW
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFD--EMPQ--RDVVSWNG 117
Query: 193 LIQAYVKMDYPTEAILSFFDMCQ-ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDN 251
LI +YV +AI F M Q +NL+ D +V LSACS L +L +G +I+R++
Sbjct: 118 LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-T 176
Query: 252 HFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEM-------------------------- 285
F +S V I NAL+DM+ KCG + AR VFD M
Sbjct: 177 EFEMS--VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARV 234
Query: 286 -----PVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGW 340
PVK+VV W +M+ G +F EAL++FR MQ G++PD+F LV +L CA G
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 341 LELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVG 400
LE GKW+H Y+++N + D +G ALVDMYAKCG I+ A VF +K RD S+T++I G
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYG 354
Query: 401 LAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQP 460
LA++G + +ALD++ EM VG+ D +TFV VL+AC+H G V EG K F M+ +N+QP
Sbjct: 355 LAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 461 QTEHYGCMVDLFGRAGLIREALDLIKSM------PLVPDAFVWGALLGACKIHAKVELAE 514
++EH C++DL RAGL+ EA +LI M LVP V+ +LL A + + V++AE
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP---VYCSLLSAARNYGNVKIAE 471
Query: 515 IVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEF 574
V E L + E A+ L+ ++Y+S NRW++ +R+KMK+ ++K PGCS +E+ G
Sbjct: 472 RVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVG 531
Query: 575 YEFRKGDK--SHPKTLEIYKLLDEIMHQSKN 603
+EF GD SHPK EI +L HQ+ N
Sbjct: 532 HEFIVGDDLLSHPKMDEINSML----HQTTN 558
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/614 (35%), Positives = 350/614 (57%), Gaps = 41/614 (6%)
Query: 30 RLESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLSL-----QNPQVY 84
+L KS+ +KQ HA I++T L++ +S S N L++ P+
Sbjct: 18 KLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESI 77
Query: 85 LYNFIIQCLSNANPLEAIALYREML--IKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAY 142
++N ++ LS ++ A L+ + + + G L LP +LKA + +L G ++H
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLP-ILKAVSKVSALFEGMELHGV 136
Query: 143 SMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDY 202
+ K A L + +V M +YA CG I +F H RD+V+W T+I+ Y +
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH----RDVVTWNTMIERYCRFGL 192
Query: 203 PTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSP----- 257
EA F +M +N+ PD MIL ++SAC + G++ I+ ++ +N +
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 258 ------------------------DVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSW 293
++F+ A++ Y KCG + A+ +FD+ K++V W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 294 NSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDK 353
+MI+ +EAL +F M G+KPD ++ V+++CAN+G L+ KWVH+ +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 354 NHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDI 413
N + ++ I NAL++MYAKCG +D VF M R+V S+++MI L++HG+A AL +
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 414 FSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFG 473
F+ M Q +EP+EVTFVGVL CSH+GLVEEG K F M+ YN+ P+ EHYGCMVDLFG
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 474 RAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYIL 533
RA L+REAL++I+SMP+ + +WG+L+ AC+IH ++EL + + ++ EP+ DGA +L
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 534 MTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKL 593
M+NIY+ + RW++ +R+ M+E+ V K G S ++ G+ +EF GDK H ++ EIY
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 594 LDEIMHQSKNHGYI 607
LDE++ + K GY+
Sbjct: 613 LDEVVSKLKLAGYV 626
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/605 (36%), Positives = 342/605 (56%), Gaps = 47/605 (7%)
Query: 31 LESSKSVGQLKQFHAFIIKTG---SPQHQTQILYDKIISLSR--GNEIENL-SLQNPQVY 84
LE K + LKQ A +I G P ++++ +S SR ++ L ++NP ++
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIF 119
Query: 85 LYNFIIQCLSNA-NPLEAIALYREMLIKGLL---PNTYTLPYVLKACWQSQSLRVGQQVH 140
+N I+ S + NP E+ LY++ML G P+ +T P + K C + +G +
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 141 AYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKM 200
+ +K L +V N + ++A CG ++ K+F RDLVSW LI Y K+
Sbjct: 180 GHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD----ESPVRDLVSWNCLINGYKKI 235
Query: 201 DYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVF 260
+AI + M ++PD + ++ ++S+CS LGDL+ G + + Y+ +N ++ +
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT--IP 293
Query: 261 IHNALIDMYLKCGNIPSAR-------------------------------KVFDEMPVKN 289
+ NAL+DM+ KCG+I AR K+FD+M K+
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 290 VVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHT 349
VV WN+MI G + ++AL +F+ MQ KPD+ T++ L++C+ +G L++G W+H
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 350 YLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWK 409
Y++K ++ + +G +LVDMYAKCG I +A VF ++ R+ +YTA+I GLA+HG A
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 410 ALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMV 469
A+ F+EM GI PDE+TF+G+LSAC H G+++ G +F M +NL PQ +HY MV
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 470 DLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDG 529
DL GRAGL+ EA L++SMP+ DA VWGALL C++H VEL E + L+ +P G
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSG 593
Query: 530 AYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLE 589
Y+L+ +Y N W++A + R+ M ER V+K PGCS +EV G EF DKS P++ +
Sbjct: 594 IYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEK 653
Query: 590 IYKLL 594
IY L
Sbjct: 654 IYDRL 658
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 338/584 (57%), Gaps = 14/584 (2%)
Query: 31 LESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLSLQ------NPQVY 84
++S+ QLKQ HA ++ G + L K+I S + Q PQ++
Sbjct: 28 IDSATHKAQLKQIHARLLVLG--LQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 85 LYNFIIQCLSNANPLE-AIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYS 143
+N II+ S N + A+ +Y M + + P+++T P++LKAC L++G+ VHA
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 144 MKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYP 203
+ ++V+V N L+ LYA C + + +F P +R +VSWT ++ AY + P
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFE--GLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 204 TEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHN 263
EA+ F M + +++PD + LV VL+A + L DL G IH + + PD+ I
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI-- 261
Query: 264 ALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKP 323
+L MY KCG + +A+ +FD+M N++ WN+MI+G G +EA+D+F M ++P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 324 DDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVF 383
D ++ +++CA +G LE + ++ Y+ ++ D FI +AL+DM+AKCG ++ A VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 384 RSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVE 443
RDV ++AMIVG +HG+A +A+ ++ M + G+ P++VTF+G+L AC+H+G+V
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 444 EGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
EG F M+ + + PQ +HY C++DL GRAG + +A ++IK MP+ P VWGALL A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 504 CKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTP 563
CK H VEL E + L +P G Y+ ++N+Y++ W ++R +MKE+ + K
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 564 GCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
GCS VEV G FR GDKSHP+ EI + ++ I + K G++
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/530 (37%), Positives = 316/530 (59%), Gaps = 7/530 (1%)
Query: 79 QNPQVYLYNFIIQCLSNANPL-EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQ 137
Q P ++LYN +I N + E + L+ + GL + +T P VLKAC ++ S ++G
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 138 QVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAY 197
+H+ +K +V +L+ +Y+ G + HKLF R +V+WT L Y
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFD----EIPDRSVVTWTALFSGY 187
Query: 198 VKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSP 257
EAI F M + ++PD +V VLSAC +GDL G I +Y+ + +
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE--MEMQK 245
Query: 258 DVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQ 317
+ F+ L+++Y KCG + AR VFD M K++V+W++MI G KE +++F +M
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 318 GLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRID 377
LKPD F++V L+SCA++G L+LG+W + +D++ T+ F+ NAL+DMYAKCG +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 378 QAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACS 437
+ F VF+ MK +D+ A I GLA +G + +F + ++GI PD TF+G+L C
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425
Query: 438 HAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVW 497
HAGL+++G + F +S VY L+ EHYGCMVDL+GRAG++ +A LI MP+ P+A VW
Sbjct: 426 HAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 498 GALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKER 557
GALL C++ +LAE V++ L+ EP G Y+ ++NIYS RW EA ++R M ++
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
Query: 558 KVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
+KK PG S +E+ G+ +EF DKSHP + +IY L+++ ++ + G++
Sbjct: 546 GMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFV 595
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 20/292 (6%)
Query: 223 MILVIVLSACSKLGDLSLGI----------KIHRYITDNHFNLSPDVFIHNALIDMYLKC 272
M +V V SA SK+ + I +IH + ++H L D F+ N L+ L
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHH--LHHDTFLVNLLLKRTLFF 58
Query: 273 GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVL 332
+ +F N+ +NS+I G + F E LD+F ++ GL FT VL
Sbjct: 59 RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVL 118
Query: 333 NSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVY 392
+C +LG +H+ + K N D +L+ +Y+ GR++ A +F + R V
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 393 SYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEG---CKHF 449
++TA+ G G+ +A+D+F +M ++G++PD V VLSAC H G ++ G K+
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 450 LDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALL 501
+M N +T +V+L+ + G + +A + SM + D W ++
Sbjct: 239 EEMEMQKNSFVRTT----LVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 111/241 (46%), Gaps = 6/241 (2%)
Query: 60 LYDKIISLSRGNEIENLSLQNPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYT 119
LY K + + + + ++ V I SN+ P E I L+ +ML + L P+ ++
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 120 LPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQ 179
+ L +C +L +G+ + + L+N+++ N L+ +YA CG + ++F
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVF---- 371
Query: 180 HPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLS 239
++D+V I K + + F + + PDG + +L C G +
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 240 LGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVK-NVVSWNSMIA 298
G++ I+ + L V + ++D++ + G + A ++ +MP++ N + W ++++
Sbjct: 432 DGLRFFNAIS-CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Query: 299 G 299
G
Sbjct: 491 G 491
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/533 (36%), Positives = 302/533 (56%), Gaps = 42/533 (7%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
EA+ + M +G + N Y+ VL AC + G QVH+ K+ LS+VY+ + L+
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 160 RLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLR 219
+Y+ CG + ++F R++VSW +LI + + EA+ F M ++ +
Sbjct: 195 DMYSKCGNVNDAQRVF----DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 220 PDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSAR 279
PD + L V+SAC+ L + +G ++H + N L D+ + NA +DMY KC I AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKND-KLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 280 KVFDEMPV-------------------------------KNVVSWNSMIAGLTHRGQFKE 308
+FD MP+ +NVVSWN++IAG T G+ +E
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 309 ALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHI------NTDGFI 362
AL +F ++ + P ++ +L +CA++ L LG H ++ K+ D F+
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 363 GNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGI 422
GN+L+DMY KCG +++ + VFR M RD S+ AMI+G A +G +AL++F EM + G
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489
Query: 423 EPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREAL 482
+PD +T +GVLSAC HAG VEEG +F M+R + + P +HY CMVDL GRAG + EA
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK 549
Query: 483 DLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKN 542
+I+ MP+ PD+ +WG+LL ACK+H + L + V E L+ EP G Y+L++N+Y+
Sbjct: 550 SMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Query: 543 RWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLD 595
+W++ + +RK M++ V K PGCS +++ G + F DKSHP+ +I+ LLD
Sbjct: 610 KWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 220/454 (48%), Gaps = 74/454 (16%)
Query: 117 TYTLPY--VLKACWQSQ-SLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHK 173
T + P+ +L +C +S+ S + VHA +K+ + +++ N L+ Y+ CG ++ +
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 174 LFH-----------------------------FRQHPQAQRDLVSWTTLIQAYVKMDYPT 204
+F FR P +RD +W +++ + + D
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP--ERDQCTWNSMVSGFAQHDRCE 134
Query: 205 EAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNA 264
EA+ F M + + VLSACS L D++ G+++H I + F LS DV+I +A
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF-LS-DVYIGSA 192
Query: 265 LIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPD 324
L+DMY KCGN+ A++VFDEM +NVVSWNS+I G EALD+F+ M ++PD
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 325 DFTLVCVLNSCANIGWLELGKWVHTYLDKN-HINTDGFIGNALVDMYAKCGRIDQAFGVF 383
+ TL V+++CA++ +++G+ VH + KN + D + NA VDMYAKC RI +A +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 384 RSMKCRDVYSYTAMIVGLAI-------------------------------HGKAWKALD 412
SM R+V + T+MI G A+ +G+ +AL
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 413 IFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCK-HFLDMSRVYNLQPQTEHY----GC 467
+F + + + P +F +L AC+ + G + H + + Q E
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 468 MVDLFGRAGLIREALDLIKSMPLVPDAFVWGALL 501
++D++ + G + E + + M + D W A++
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 211/471 (44%), Gaps = 91/471 (19%)
Query: 2 ASPLTVASGSRYNDINTFQQL-SLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQHQTQIL 60
AS L+ SG ND+N Q+ SL+ +SP L L ++ K G+ + Q +
Sbjct: 156 ASVLSACSG--LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS---KCGNV-NDAQRV 209
Query: 61 YDKIISLSRGNEIENLSLQNPQVYLYNFIIQCLSNANP-LEAIALYREMLIKGLLPNTYT 119
+D+ + + V +N +I C P +EA+ +++ ML + P+ T
Sbjct: 210 FDE--------------MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 120 LPYVLKACWQSQSLRVGQQVHAYSMKTALLSN-VYVFNTLMRLYAVCGLIKAVHKLFHFR 178
L V+ AC +++VGQ+VH +K L N + + N + +YA C IK F F
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR--FIFD 313
Query: 179 QHP-----------------------------QAQRDLVSWTTLIQAYVKMDYPTEAILS 209
P A+R++VSW LI Y + EA+
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Query: 210 FFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSP----DVFIHNAL 265
F + + ++ P +L AC+ L +L LG++ H ++ + F D+F+ N+L
Sbjct: 374 FCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 266 IDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDD 325
IDMY+KCG + VF +M ++ VSWN+MI G G EAL++FR M G KPD
Sbjct: 434 IDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDH 493
Query: 326 FTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRS 385
T++ VL++C + G++E G+ + + ++ FGV
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRD-------------------------FGV--- 525
Query: 386 MKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSAC 436
RD YT M+ L G +A + EM ++PD V + +L+AC
Sbjct: 526 APLRD--HYTCMVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWGSLLAAC 571
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 47/383 (12%)
Query: 244 IHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHR 303
+H + + F S ++FI N LID Y KCG++ R+VFD+MP +N+ +WNS++ GLT
Sbjct: 42 VHASVIKSGF--SNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 304 GQFKEALDIFRRM-------------------------------QGLGLKPDDFTLVCVL 332
G EA +FR M G ++++ VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 333 NSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVY 392
++C+ + + G VH+ + K+ +D +IG+ALVDMY+KCG ++ A VF M R+V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 393 SYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDM 452
S+ ++I +G A +ALD+F M + +EPDEVT V+SAC+ ++ G + +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 453 SRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMP----LVPDAFVWGALLGACKIHA 508
+ L+ VD++ + I+EA + SMP + + + G + A A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 509 KVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKT--PGCS 566
++ ++ N+V + G Y+ +EAL L +K V T +
Sbjct: 340 RLMFTKMAERNVVSWNALIAG--------YTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 567 LVEVYGEFYEFRKGDKSHPKTLE 589
+++ + E G ++H L+
Sbjct: 392 ILKACADLAELHLGMQAHVHVLK 414
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 128/260 (49%), Gaps = 20/260 (7%)
Query: 95 NANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMK------TAL 148
N EA++L+ + + + P Y+ +LKAC L +G Q H + +K +
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 149 LSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAIL 208
+++V N+L+ +Y CG ++ + +F +RD VSW +I + + Y EA+
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVF----RKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 209 SFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDM 268
F +M ++ +PD + ++ VLSAC G + G +T + F ++P + ++D+
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-FGVAPLRDHYTCMVDL 538
Query: 269 YLKCGNIPSARKVFDEMPVK-NVVSWNSMIAGL-THRGQFKEALDIFRRMQGLGLKPDDF 326
+ G + A+ + +EMP++ + V W S++A HR L + + L ++P +
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI---TLGKYVAEKLLEVEPSNS 595
Query: 327 TLVCVLNSCANIGWLELGKW 346
+L++ + ELGKW
Sbjct: 596 GPYVLLSNM----YAELGKW 611
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 70/283 (24%)
Query: 345 KWVHTYLDKNHINTDGFIGNALVDMYAKCGR----------------------------- 375
++VH + K+ + + FI N L+D Y+KCG
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 376 --IDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVL 433
+D+A +FRSM RD ++ +M+ G A H + +AL F+ M + G +E +F VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 434 SACSHAGLVEEG----------------------------CKHFLDMSRVYNLQPQTE-- 463
SACS + +G C + D RV++
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 464 HYGCMVDLFGRAGLIREALDLIKSM---PLVPDAFVWGALLGACKIHAKVELAEIVMENL 520
+ ++ F + G EALD+ + M + PD +++ AC + +++ + V +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 521 VRFEPEGDGAYILMTN----IYSSKNRWKEALKLRKKMKERKV 559
V+ + + I+++N +Y+ +R KEA + M R V
Sbjct: 280 VKNDKLRND--IILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 301/499 (60%), Gaps = 6/499 (1%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRV-GQQVHAYSMKTALLSNVYVFNTL 158
E+I+LYR ML G P+ ++ P++LK+C S SL V GQQ+H + K + +V L
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSC-ASLSLPVSGQQLHCHVTKGGCETEPFVLTAL 94
Query: 159 MRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANL 218
+ +Y CGL+ K+F ++PQ+ + V + LI Y T+A F M + +
Sbjct: 95 ISMYCKCGLVADARKVFE--ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGV 152
Query: 219 RPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSA 278
D + ++ ++ C+ L LG +H L +V + N+ I MY+KCG++ +
Sbjct: 153 SVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG--GLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 279 RKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANI 338
R++FDEMPVK +++WN++I+G + G + L+++ +M+ G+ PD FTLV VL+SCA++
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 339 GWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMI 398
G ++G V ++ N + F+ NA + MYA+CG + +A VF M + + S+TAMI
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 399 VGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNL 458
+HG L +F +M + GI PD FV VLSACSH+GL ++G + F M R Y L
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 459 QPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVME 518
+P EHY C+VDL GRAG + EA++ I+SMP+ PD VWGALLGACKIH V++AE+
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 519 NLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFR 578
++ FEP G Y+LM+NIYS + ++R M+ER +K PG S VE G + F
Sbjct: 451 KVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFL 510
Query: 579 KGDKSHPKTLEIYKLLDEI 597
GD+SH +T E++++LDE+
Sbjct: 511 AGDRSHEQTEEVHRMLDEL 529
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 187/378 (49%), Gaps = 8/378 (2%)
Query: 190 WTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYIT 249
W ++ +E+I + M ++ PD +L +C+ L G ++H ++T
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 250 DNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVS--WNSMIAGLTHRGQFK 307
P F+ ALI MY KCG + ARKVF+E P + +S +N++I+G T +
Sbjct: 81 KGGCETEP--FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 308 EALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALV 367
+A +FRRM+ G+ D T++ ++ C +L LG+ +H K ++++ + N+ +
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 368 DMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEV 427
MY KCG ++ +F M + + ++ A+I G + +G A+ L+++ +M G+ PD
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 428 TFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKS 487
T V VLS+C+H G + G + P + ++ R G + +A +
Sbjct: 259 TLVSVLSSCAHLGAKKIG-HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 488 MPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGA-YILMTNIYSSKNRWKE 546
MP V W A++G +H E+ ++ +++++ DGA ++++ + S +
Sbjct: 318 MP-VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 547 ALKLRKKMKERKVKKTPG 564
L+L + MK R+ K PG
Sbjct: 377 GLELFRAMK-REYKLEPG 393
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 181/363 (49%), Gaps = 15/363 (4%)
Query: 79 QNPQV----YLYNFIIQC-LSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSL 133
+NPQ YN +I +N+ +A ++R M G+ ++ T+ ++ C + L
Sbjct: 113 ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYL 172
Query: 134 RVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTL 193
+G+ +H +K L S V V N+ + +Y CG ++A +LF + L++W +
Sbjct: 173 WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF----DEMPVKGLITWNAV 228
Query: 194 IQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHF 253
I Y + + + + M + + PD LV VLS+C+ LG +G ++ + + N F
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF 288
Query: 254 NLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIF 313
P+VF+ NA I MY +CGN+ AR VFD MPVK++VSW +MI G + L +F
Sbjct: 289 --VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 314 RRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIG-NALVDMYAK 372
M G++PD V VL++C++ G + G + + + + G + LVD+ +
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
Query: 373 CGRIDQAFGVFRSMKCR-DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVG 431
GR+D+A SM D + A++ IH A F+++ + EP+ + +
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKV--IEFEPNNIGYYV 464
Query: 432 VLS 434
++S
Sbjct: 465 LMS 467
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/587 (34%), Positives = 335/587 (57%), Gaps = 16/587 (2%)
Query: 28 SPRLESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLS------LQNP 81
S S +SV +Q H FI+K+G + + + + +++ N+ + + +
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 82 QVYLYNFIIQC-LSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVH 140
V +N II +SN + ++++ +ML+ G+ + T+ V C S+ + +G+ VH
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 141 AYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKM 200
+ +K NTL+ +Y+ CG + + +F + R +VS+T++I Y +
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR----EMSDRSVVSYTSMIAGYARE 375
Query: 201 DYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVF 260
EA+ F +M + + PD + VL+ C++ L G ++H +I +N +L D+F
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN--DLGFDIF 433
Query: 261 IHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRM-QGL 319
+ NAL+DMY KCG++ A VF EM VK+++SWN++I G + EAL +F + +
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 320 GLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQA 379
PD+ T+ CVL +CA++ + G+ +H Y+ +N +D + N+LVDMYAKCG + A
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 380 FGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHA 439
+F + +D+ S+T MI G +HG +A+ +F++M Q GIE DE++FV +L ACSH+
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 440 GLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGA 499
GLV+EG + F M ++P EHY C+VD+ R G + +A I++MP+ PDA +WGA
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673
Query: 500 LLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKV 559
LL C+IH V+LAE V E + EPE G Y+LM NIY+ +W++ +LRK++ +R +
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Query: 560 KKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGY 606
+K PGCS +E+ G F GD S+P+T I L ++ + GY
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 780
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 243/493 (49%), Gaps = 20/493 (4%)
Query: 22 LSLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLSLQNP 81
L L S L+ K V + + F+I + + + ++Y L + + + ++
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDS-NLGSKLSLMYTNCGDLKEASRVFD-EVKIE 158
Query: 82 QVYLYNFIIQCLSNANPLE-AIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVH 140
+ +N ++ L+ + +I L+++M+ G+ ++YT V K+ +S+ G+Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 141 AYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKM 200
+ +K+ V N+L+ Y + + K+F +RD++SW ++I YV
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF----DEMTERDVISWNSIINGYVSN 274
Query: 201 DYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVF 260
+ + F M + + D +V V + C+ +SLG +H F+ D F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS-REDRF 333
Query: 261 IHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLG 320
N L+DMY KCG++ SA+ VF EM ++VVS+ SMIAG G EA+ +F M+ G
Sbjct: 334 C-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 321 LKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAF 380
+ PD +T+ VLN CA L+ GK VH ++ +N + D F+ NAL+DMYAKCG + +A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 381 GVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFS-EMSQVGIEPDEVTFVGVLSACSHA 439
VF M+ +D+ S+ +I G + + A +AL +F+ + + PDE T VL AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 440 GLVEEGCK-HFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREA---LDLIKSMPLVPDAF 495
++G + H M Y + +VD++ + G + A D I S LV
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASKDLVS--- 567
Query: 496 VWGALLGACKIHA 508
W ++ +H
Sbjct: 568 -WTVMIAGYGMHG 579
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 146/317 (46%), Gaps = 35/317 (11%)
Query: 221 DGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARK 280
D L VL C+ L G ++ +I N F + D + + L MY CG++ A +
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVI--DSNLGSKLSLMYTNCGDLKEASR 150
Query: 281 VFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGW 340
VFDE+ ++ + WN ++ L G F ++ +F++M G++ D +T CV S +++
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 341 LELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVG 400
+ G+ +H ++ K+ +GN+LV Y K R+D A VF M RDV S+ ++I G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 401 LAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEG--------------- 445
+G A K L +F +M GIE D T V V + C+ + L+ G
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 446 ---CKHFLDM-SRVYNLQPQTE-----------HYGCMVDLFGRAGLIREALDLIKSMP- 489
C LDM S+ +L Y M+ + R GL EA+ L + M
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 490 --LVPDAFVWGALLGAC 504
+ PD + A+L C
Sbjct: 391 EGISPDVYTVTAVLNCC 407
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 329/609 (54%), Gaps = 38/609 (6%)
Query: 35 KSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENL---SLQNPQVYLYNFIIQ 91
KS Q KQ HA I+T S H + + I + + L +L++P V + +I+
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 92 CLSNANPL-EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLS 150
C ++ + +A+A + EM G P+ P VLK+C LR G+ VH + ++ +
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 151 NVYVFNTLMRLYA-VCGLIKAVHKLFHFRQHPQ--------------------------- 182
++Y N LM +YA + G+ + F + PQ
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 183 ----AQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDL 238
++D+VS+ T+I Y + +A+ +M +L+PD L VL S+ D+
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 239 SLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIA 298
G +IH Y+ + DV+I ++L+DMY K I + +VF + ++ +SWNS++A
Sbjct: 259 IKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 299 GLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINT 358
G G++ EAL +FR+M +KP V+ +CA++ L LGK +H Y+ + +
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 359 DGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMS 418
+ FI +ALVDMY+KCG I A +F M D S+TA+I+G A+HG +A+ +F EM
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 419 QVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLI 478
+ G++P++V FV VL+ACSH GLV+E +F M++VY L + EHY + DL GRAG +
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 479 REALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIY 538
EA + I M + P VW LL +C +H +ELAE V E + + E GAY+LM N+Y
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 539 SSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIM 598
+S RWKE KLR +M+++ ++K P CS +E+ + + F GD+SHP +I + L +M
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616
Query: 599 HQSKNHGYI 607
Q + GY+
Sbjct: 617 EQMEKEGYV 625
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 308/526 (58%), Gaps = 14/526 (2%)
Query: 78 LQNPQVYLYNFIIQCLSNANPLE---AIALYREMLIKGLLPNTYTLPYVLKACWQSQSLR 134
LQ + L++ +I S L + YR M G++P+ +T P +LKA ++ LR
Sbjct: 62 LQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK---LR 118
Query: 135 VGQ--QVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTT 192
Q HA+ +K L S+ +V N+L+ Y+ GL +LF + +D+V+WT
Sbjct: 119 DSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAE----DKDVVTWTA 174
Query: 193 LIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNH 252
+I +V+ +EA++ F +M + + + M +V VL A K+ D+ G +H +
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 253 FNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDI 312
+ DVFI ++L+DMY KC A+KVFDEMP +NVV+W ++IAG F + + +
Sbjct: 235 -RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 313 FRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAK 372
F M + P++ TL VL++CA++G L G+ VH Y+ KN I + G L+D+Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 373 CGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGV 432
CG +++A VF + ++VY++TAMI G A HG A A D+F M + P+EVTF+ V
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 433 LSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVP 492
LSAC+H GLVEEG + FL M +N++P+ +HY CMVDLFGR GL+ EA LI+ MP+ P
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 493 DAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRK 552
VWGAL G+C +H EL + +++ +P G Y L+ N+YS W E ++RK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 553 KMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHP-KTLEIYKLLDEI 597
+MK+++V K+PG S +EV G+ EF D P ++ ++YK LD +
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 351/610 (57%), Gaps = 32/610 (5%)
Query: 1 MASPLTVASGSRYNDINTFQQLSLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQHQTQIL 60
M S L V + S + F++ L P+ ++ Q+KQ HA II+ H+ +
Sbjct: 1 MTSSLPVRAPSWVSSRRIFEER--LQDLPK---CANLNQVKQLHAQIIRRN--LHEDLHI 53
Query: 61 YDKIISLSRGNEIENLSL------QNPQVYLYNFIIQC-LSNANPLEAIALYREMLIKGL 113
K+IS NL++ Q P V+L N +I+ N+ P +A ++ EM GL
Sbjct: 54 APKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGL 113
Query: 114 LPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGL--IKAV 171
+ +T P++LKAC L V + +H + K L S++YV N L+ Y+ CG ++
Sbjct: 114 FADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDA 173
Query: 172 HKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSA 231
KLF ++RD VSW +++ VK +A F +M Q +L + +L
Sbjct: 174 MKLFE----KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDG 225
Query: 232 CSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPV--KN 289
++ ++S ++ + + + + ++ Y K G++ AR +FD+MP+ KN
Sbjct: 226 YARCREMSKAFELFEKMPER------NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 290 VVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHT 349
VV+W +IAG +G KEA + +M GLK D ++ +L +C G L LG +H+
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 350 YLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWK 409
L ++++ ++ ++ NAL+DMYAKCG + +AF VF + +D+ S+ M+ GL +HG +
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 410 ALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMV 469
A+++FS M + GI PD+VTF+ VL +C+HAGL++EG +F M +VY+L PQ EHYGC+V
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV 459
Query: 470 DLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDG 529
DL GR G ++EA+ ++++MP+ P+ +WGALLGAC++H +V++A+ V++NLV+ +P G
Sbjct: 460 DLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPG 519
Query: 530 AYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLE 589
Y L++NIY++ W+ +R KMK V+K G S VE+ +EF DKSHPK+ +
Sbjct: 520 NYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQ 579
Query: 590 IYKLLDEIMH 599
IY++L ++
Sbjct: 580 IYQMLGSLIE 589
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/477 (40%), Positives = 291/477 (61%), Gaps = 12/477 (2%)
Query: 98 PLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNT 157
P I Y+ + G P+ +T P V KAC + +R G+Q+H K ++YV N+
Sbjct: 87 PRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNS 146
Query: 158 LMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQAN 217
L+ Y VCG + K+F RD+VSWT +I + + EA+ +F M +
Sbjct: 147 LVHFYGVCGESRNACKVFG----EMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---D 199
Query: 218 LRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPS 277
+ P+ V VL + ++G LSLG IH I +S + NALIDMY+KC +
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET--GNALIDMYVKCEQLSD 257
Query: 278 ARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQ-GLGLKPDDFTLVCVLNSCA 336
A +VF E+ K+ VSWNSMI+GL H + KEA+D+F MQ G+KPD L VL++CA
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACA 317
Query: 337 NIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTA 396
++G ++ G+WVH Y+ I D IG A+VDMYAKCG I+ A +F ++ ++V+++ A
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 397 MIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDM-SRV 455
++ GLAIHG ++L F EM ++G +P+ VTF+ L+AC H GLV+EG ++F M SR
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE 437
Query: 456 YNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKV-ELAE 514
YNL P+ EHYGCM+DL RAGL+ EAL+L+K+MP+ PD + GA+L ACK + EL +
Sbjct: 438 YNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPK 497
Query: 515 IVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVY 571
++++ + E E G Y+L++NI+++ RW + ++R+ MK + + K PG S +E +
Sbjct: 498 EILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIEKF 554
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/571 (36%), Positives = 321/571 (56%), Gaps = 38/571 (6%)
Query: 26 HQSP---RLESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSR-------GNEIEN 75
H P +LE+ +S+ +L Q H +IK+ + +I LSR E N
Sbjct: 5 HYKPILSQLENCRSLVELNQLHGLMIKSS--------VIRNVIPLSRLIDFCTTCPETMN 56
Query: 76 LS--------LQNPQVYLYNFIIQCLSNA-NPLEAIALYREMLIKGLLPNTYTLPYVLKA 126
LS + P VY++N +I+ SN+ NP +A+ Y+EML KG P+ +T PYVLKA
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 127 CWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRD 186
C + ++ G VH + +KT N+YV L+ +Y CG + + L F PQ +
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVN--YGLRVFEDIPQW--N 172
Query: 187 LVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHR 246
+V+W +LI +V + ++AI +F +M ++ + I+V +L AC + D+ G H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 247 YITDNHFN------LSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGL 300
++ F+ + +V + +LIDMY KCG++ +AR +FD MP + +VSWNS+I G
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 301 THRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDG 360
+ G +EAL +F M LG+ PD T + V+ + G +LG+ +H Y+ K D
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 361 FIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQV 420
I ALV+MYAK G + A F ++ +D ++T +I+GLA HG +AL IF M +
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Query: 421 G-IEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIR 479
G PD +T++GVL ACSH GLVEEG ++F +M ++ L+P EHYGCMVD+ RAG
Sbjct: 413 GNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFE 472
Query: 480 EALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYS 539
EA L+K+MP+ P+ +WGALL C IH +EL + + + E G G Y+L++NIY+
Sbjct: 473 EAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYA 532
Query: 540 SKNRWKEALKLRKKMKERKVKKTPGCSLVEV 570
RW + +R+ MK ++V K G S VE
Sbjct: 533 KAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 334/602 (55%), Gaps = 14/602 (2%)
Query: 12 RYNDIN-TFQQLSLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQHQTQI--LYDKIISLS 68
RY+D+ + L + E+ VG K+ H ++K+G + L +
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVG--KEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 69 RGNEIENLSLQNPQVYL--YNFIIQCLS-NANPLEAIALYREMLIKGLLPNTYTLPYVLK 125
+ NE + + P+ L +N I+ S N A+ + + M + L P+ T+ VL
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 126 ACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQR 185
A + + VG+++H Y+M++ S V + L+ +YA CG ++ +LF +R
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD----GMLER 300
Query: 186 DLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIH 245
++VSW ++I AYV+ + P EA+L F M ++P + ++ L AC+ LGDL G IH
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 246 RYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQ 305
+ + L +V + N+LI MY KC + +A +F ++ + +VSWN+MI G G+
Sbjct: 361 KLSVE--LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 306 FKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNA 365
+AL+ F +M+ +KPD FT V V+ + A + KW+H + ++ ++ + F+ A
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 366 LVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPD 425
LVDMYAKCG I A +F M R V ++ AMI G HG AL++F EM + I+P+
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 426 EVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLI 485
VTF+ V+SACSH+GLVE G K F M Y+++ +HYG MVDL GRAG + EA D I
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 486 KSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWK 545
MP+ P V+GA+LGAC+IH V AE E L P+ G ++L+ NIY + + W+
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658
Query: 546 EALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHG 605
+ ++R M + ++KTPGCS+VE+ E + F G +HP + +IY L++++ K G
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Query: 606 YI 607
Y+
Sbjct: 719 YV 720
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 263/521 (50%), Gaps = 48/521 (9%)
Query: 31 LESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISL-SRGNEIENLS-----LQNPQVY 84
LE S+ +L+Q + K G +Q K++SL R ++ + + +
Sbjct: 44 LERCSSLKELRQILPLVFKNG--LYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 85 LYNFIIQCLSNANPLE-AIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYS 143
LY+ +++ + + L+ A+ + M + P Y Y+LK C LRVG+++H
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 144 MKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYP 203
+K+ +++ L +YA C + K+F +RDLVSW T++ Y +
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVF----DRMPERDLVSWNTIVAGYSQNGMA 217
Query: 204 TEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHN 263
A+ MC+ NL+P + +V VL A S L +S+G +IH Y + F+ V I
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD--SLVNIST 275
Query: 264 ALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKP 323
AL+DMY KCG++ +AR++FD M +NVVSWNSMI KEA+ IF++M G+KP
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 324 DDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVF 383
D +++ L++CA++G LE G+++H + ++ + + N+L+ MY KC +D A +F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 384 RSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACS------ 437
++ R + S+ AMI+G A +G+ AL+ FS+M ++PD T+V V++A +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 438 HA----GLVEEGC--------KHFLDM----------SRVYNLQPQ--TEHYGCMVDLFG 473
HA G+V C +DM ++++ + + M+D +G
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 474 RAGLIREALDLIKSM---PLVPDAFVWGALLGACKIHAKVE 511
G + AL+L + M + P+ + +++ AC VE
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 7/277 (2%)
Query: 227 IVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMP 286
++L CS L +L +I + N L + F L+ ++ + G++ A +VF+ +
Sbjct: 42 LLLERCSSLKELR---QILPLVFKN--GLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 287 VKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKW 346
K V +++M+ G +AL F RM+ ++P + +L C + L +GK
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 347 VHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGK 406
+H L K+ + D F L +MYAKC ++++A VF M RD+ S+ ++ G + +G
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 407 AWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYG 466
A AL++ M + ++P +T V VL A S L+ G K +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG-KEIHGYAMRSGFDSLVNIST 275
Query: 467 CMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
+VD++ + G + A L M L + W +++ A
Sbjct: 276 ALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 321/582 (55%), Gaps = 21/582 (3%)
Query: 36 SVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENL--SLQNPQVYLYNFIIQCL 93
SV QL+Q A ++ + L K + L N L + P Y +N++I+ L
Sbjct: 49 SVNQLRQIQAQMLL--HSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGL 106
Query: 94 SNA-NPLEA-IALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSN 151
+N N EA ++LYR M GL P+ +T +V AC + + + VG+ VH+ K L +
Sbjct: 107 TNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERD 166
Query: 152 VYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFF 211
V++ ++L+ +YA CG + KLF +RD VSW ++I Y + Y +A+ F
Sbjct: 167 VHINHSLIMMYAKCGQVGYARKLFD----EITERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 212 DMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLK 271
M + PD LV +L ACS LGDL G + LS F+ + LI MY K
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS--TFLGSKLISMYGK 280
Query: 272 CGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCV 331
CG++ SAR+VF++M K+ V+W +MI + G+ EA +F M+ G+ PD TL V
Sbjct: 281 CGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTV 340
Query: 332 LNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDV 391
L++C ++G LELGK + T+ + + + ++ LVDMY KCGR+++A VF +M ++
Sbjct: 341 LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE 400
Query: 392 YSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLD 451
++ AMI A G A +AL +F MS + P ++TF+GVLSAC HAGLV +GC++F +
Sbjct: 401 ATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHE 457
Query: 452 MSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVE 511
MS ++ L P+ EHY ++DL RAG++ EA + ++ P PD + A+LGAC V
Sbjct: 458 MSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVA 517
Query: 512 LAEIVMENLVRF-EPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEV 570
+ E M L+ E + G Y++ +N+ + W E+ K+R M++R V KTPGCS +E+
Sbjct: 518 IREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEI 577
Query: 571 YGEFYEFRKGDK----SHPKTLEIYKLLDEIMHQSK-NHGYI 607
GE EF G + ++ LL E M + + GYI
Sbjct: 578 EGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGYI 619
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 205/386 (53%), Gaps = 22/386 (5%)
Query: 122 YVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHP 181
++LK C LR Q+ A LL +V N L+ G LF + P
Sbjct: 42 FLLKKCISVNQLR---QIQA----QMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEP 94
Query: 182 QAQRDLVSWTTLIQAYVKMDYPTEAILSFFD-MCQANLRPDGMILVIVLSACSKLGDLSL 240
+ S+ +I+ EA LS + M + L+PD V AC+KL ++ +
Sbjct: 95 ----NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV 150
Query: 241 GIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGL 300
G +H + L DV I+++LI MY KCG + ARK+FDE+ ++ VSWNSMI+G
Sbjct: 151 GRSVHSSLF--KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGY 208
Query: 301 THRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDG 360
+ G K+A+D+FR+M+ G +PD+ TLV +L +C+++G L G+ + I
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 268
Query: 361 FIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQV 420
F+G+ L+ MY KCG +D A VF M +D ++TAMI + +GK+ +A +F EM +
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 421 GIEPDEVTFVGVLSACSHAGLVEEGCK---HFLDMSRVYNLQPQTEHYGCMVDLFGRAGL 477
G+ PD T VLSAC G +E G + H ++S +N+ T +VD++G+ G
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVAT----GLVDMYGKCGR 384
Query: 478 IREALDLIKSMPLVPDAFVWGALLGA 503
+ EAL + ++MP+ +A W A++ A
Sbjct: 385 VEEALRVFEAMPVKNEA-TWNAMITA 409
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 339/612 (55%), Gaps = 44/612 (7%)
Query: 34 SKSVGQLKQFHAFIIKTGSP-----QHQTQILYDKIISLSRGNEIENLSLQNPQVYLYNF 88
S++ G Q H I+K G Q+ Y + L ++ + + V +
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 89 IIQCLSNANPLEAIALYREML-IKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTA 147
I +A+ L+ M+ + + PN+ T+ V+ AC + + L G++V+A+ +
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 148 LLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAI 207
+ N + + L+ +Y C I +LF ++ + DL + + YV+ EA+
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFD--EYGASNLDLCN--AMASNYVRQGLTREAL 322
Query: 208 LSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALID 267
F M + +RPD + ++ +S+CS+L ++ G H Y+ N F + I NALID
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALID 380
Query: 268 MYLKC-------------------------------GNIPSARKVFDEMPVKNVVSWNSM 296
MY+KC G + +A + F+ MP KN+VSWN++
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 297 IAGLTHRGQFKEALDIFRRMQGL-GLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNH 355
I+GL F+EA+++F MQ G+ D T++ + ++C ++G L+L KW++ Y++KN
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 356 INTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFS 415
I D +G LVDM+++CG + A +F S+ RDV ++TA I +A+ G A +A+++F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 416 EMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRA 475
+M + G++PD V FVG L+ACSH GLV++G + F M +++ + P+ HYGCMVDL GRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 476 GLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMT 535
GL+ EA+ LI+ MP+ P+ +W +LL AC++ VE+A E + PE G+Y+L++
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 536 NIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLD 595
N+Y+S RW + K+R MKE+ ++K PG S +++ G+ +EF GD+SHP+ I +LD
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 596 EIMHQSKNHGYI 607
E+ ++ + G++
Sbjct: 741 EVSQRASHLGHV 752
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 292/585 (49%), Gaps = 84/585 (14%)
Query: 3 SPLTVASGSRYNDINTFQQLSLLHQS-------PRLESSKSVGQLKQFHAFIIKTGSPQH 55
SP+ +A+ T + SLL+QS L++ K++ +LK FH + K G
Sbjct: 11 SPMVLAT-------TTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDND 63
Query: 56 QTQILYDKII----------SLSRGNEIENLSLQNPQVYLYNFIIQCLSNANPL-EAIAL 104
+ I K++ SLS E+ S ++YN +I+ +++ EAI L
Sbjct: 64 VSTIT--KLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 105 YREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAV 164
+ M+ G+ P+ YT P+ L AC +S++ G Q+H +K +++V N+L+ YA
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 165 CGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQ-ANLRPDGM 223
CG + + K+F ++R++VSWT++I Y + D+ +A+ FF M + + P+ +
Sbjct: 182 CGELDSARKVF----DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 224 ILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFD 283
+V V+SAC+KL DL G K++ +I ++ ++ D+ + +AL+DMY+KC I A+++FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVN-DLMV-SALVDMYMKCNAIDVAKRLFD 295
Query: 284 EMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLEL 343
E N+ N+M + +G +EAL +F M G++PD +++ ++SC+ + +
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 344 GKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAI 403
GK H Y+ +N + I NAL+DMY KC R D AF +F M + V ++ +++ G
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 404 HGK---AW----------------------------KALDIFSEM-SQVGIEPDEVTFVG 431
+G+ AW +A+++F M SQ G+ D VT +
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 432 VLSACSHAGLVEEGCKHFLDMSR-VY------NLQPQTEHYGCMVDLFGRAGLIREALDL 484
+ SAC H G LD+++ +Y +Q +VD+F R G A+ +
Sbjct: 476 IASACGHLGA--------LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 485 IKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVR--FEPEG 527
S+ D W A +GA + E A + ++++ +P+G
Sbjct: 528 FNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 336/610 (55%), Gaps = 26/610 (4%)
Query: 17 NTFQQLSLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQ----HQTQILYDKIISLSRGNE 72
++F +S++ L + + KQ HA+ ++ G + +Y K+ L+
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 73 IENLSLQNPQVYLYNFIIQCL-SNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQ 131
+ S + +N ++ L N LEA+ REM+++G+ P+ +T+ VL AC +
Sbjct: 258 LLG-SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 132 SLRVGQQVHAYSMKTALL-SNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSW 190
LR G+++HAY++K L N +V + L+ +Y C + + ++F R + W
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD----GMFDRKIGLW 372
Query: 191 TTLIQAYVKMDYPTEAILSFFDMCQ-ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYIT 249
+I Y + ++ EA+L F M + A L + + V+ AC + G S IH ++
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 250 DNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEA 309
L D F+ N L+DMY + G I A ++F +M +++V+WN+MI G ++A
Sbjct: 433 KR--GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 310 LDIFRRMQGL-----------GLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINT 358
L + +MQ L LKP+ TL+ +L SCA + L GK +H Y KN++ T
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 359 DGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMS 418
D +G+ALVDMYAKCG + + VF + ++V ++ +I+ +HG +A+D+ M
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 419 QVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLI 478
G++P+EVTF+ V +ACSH+G+V+EG + F M Y ++P ++HY C+VDL GRAG I
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 479 REALDLIKSMPL-VPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNI 537
+EA L+ MP A W +LLGA +IH +E+ EI +NL++ EP Y+L+ NI
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 538 YSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEI 597
YSS W +A ++R+ MKE+ V+K PGCS +E E ++F GD SHP++ ++ L+ +
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 598 MHQSKNHGYI 607
+ + GY+
Sbjct: 791 WERMRKEGYV 800
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 208/416 (50%), Gaps = 31/416 (7%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTAL-LSNVYVFNTL 158
EA+ Y +M++ G+ P+ Y P +LKA Q + +G+Q+HA+ K + +V V NTL
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 159 MRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANL 218
+ LY CG AV+K+F ++R+ VSW +LI + + A+ +F M N+
Sbjct: 140 VNLYRKCGDFGAVYKVF----DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV 195
Query: 219 RPDGMILVIVLSACSKL---GDLSLGIKIHRY-ITDNHFNLSPDVFIHNALIDMYLKCGN 274
P LV V++ACS L L +G ++H Y + N FI N L+ MY K G
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN----SFIINTLVAMYGKLGK 251
Query: 275 IPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNS 334
+ S++ + +++V+WN++++ L Q EAL+ R M G++PD+FT+ VL +
Sbjct: 252 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 311
Query: 335 CANIGWLELGKWVHTYLDKN-HINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYS 393
C+++ L GK +H Y KN ++ + F+G+ALVDMY C ++ VF M R +
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 394 YTAMIVGLAIHGKAWKALDIFSEMSQ-VGIEPDEVTFVGVLSACSHAGLVEEG------- 445
+ AMI G + + +AL +F M + G+ + T GV+ AC +G
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 446 CKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALL 501
K LD R ++D++ R G I A+ + M D W ++
Sbjct: 432 VKRGLDRDRFVQ--------NTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMI 478
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 7/260 (2%)
Query: 190 WTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYIT 249
W L+++ V+ + EA+L++ DM ++PD +L A + L D+ LG +IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 250 DNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEA 309
+ + V + N L+++Y KCG+ + KVFD + +N VSWNS+I+ L +++ A
Sbjct: 125 KFGYGVD-SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 310 LDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLE---LGKWVHTY-LDKNHINTDGFIGNA 365
L+ FR M ++P FTLV V+ +C+N+ E +GK VH Y L K +N+ FI N
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINT 241
Query: 366 LVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPD 425
LV MY K G++ + + S RD+ ++ ++ L + + +AL+ EM G+EPD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 426 EVTFVGVLSACSHAGLVEEG 445
E T VL ACSH ++ G
Sbjct: 302 EFTISSVLPACSHLEMLRTG 321
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/568 (37%), Positives = 317/568 (55%), Gaps = 15/568 (2%)
Query: 41 KQFHAFIIKTGSPQHQT--QILYDKIISLSRGNEIENL--SLQNPQVYLYNFIIQCL-SN 95
KQ HA I++ G + +L D + R L + N + + ++ N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 96 ANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVF 155
A EA+ L+ M GL P+ Y +L +C +L G QVHAY++K L ++ YV
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 156 NTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYP---TEAILSFFD 212
N+L+ +YA C + K+F A D+V + +I+ Y ++ EA+ F D
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIF----AAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 213 MCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKC 272
M +RP + V +L A + L L L +IH + NL D+F +ALID+Y C
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL--DIFAGSALIDVYSNC 502
Query: 273 GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVL 332
+ +R VFDEM VK++V WNSM AG + + +EAL++F +Q +PD+FT ++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 333 NSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVY 392
+ N+ ++LG+ H L K + + +I NAL+DMYAKCG + A F S RDV
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV 622
Query: 393 SYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDM 452
+ ++I A HG+ KAL + +M GIEP+ +TFVGVLSACSHAGLVE+G K F M
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 453 SRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVEL 512
R + ++P+TEHY CMV L GRAG + +A +LI+ MP P A VW +LL C VEL
Sbjct: 683 LR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVEL 741
Query: 513 AEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYG 572
AE E + +P+ G++ +++NIY+SK W EA K+R++MK V K PG S + +
Sbjct: 742 AEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINK 801
Query: 573 EFYEFRKGDKSHPKTLEIYKLLDEIMHQ 600
E + F DKSH K +IY++LD+++ Q
Sbjct: 802 EVHIFLSKDKSHCKANQIYEVLDDLLVQ 829
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 247/518 (47%), Gaps = 47/518 (9%)
Query: 79 QNPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQ 138
+ V I C+ ++ L+ +++ ++P+ Y L VL AC L G+Q
Sbjct: 211 EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Query: 139 VHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYV 198
+HA+ ++ L + + N L+ Y CG + A HKLF + ++++SWTTL+ Y
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF----NGMPNKNIISWTTLLSGYK 326
Query: 199 KMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPD 258
+ EA+ F M + L+PD +L++C+ L L G ++H Y NL D
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA--NLGND 384
Query: 259 VFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRG---QFKEALDIFRR 315
++ N+LIDMY KC + ARKVFD +VV +N+MI G + G + EAL+IFR
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 316 MQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGR 375
M+ ++P T V +L + A++ L L K +H + K +N D F G+AL+D+Y+ C
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 376 IDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSA 435
+ + VF MK +D+ + +M G + +AL++F E+ PDE TF +++A
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
Query: 436 CS-----------HAGLVEEG--CKHF-----LDMSRVYNLQPQTEH------------- 464
H L++ G C + LDM P+ H
Sbjct: 565 AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG-SPEDAHKAFDSAASRDVVC 623
Query: 465 YGCMVDLFGRAGLIREALDLIKSM---PLVPDAFVWGALLGACKIHAKVELAEIVMENLV 521
+ ++ + G ++AL +++ M + P+ + +L AC VE E ++
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 522 RF--EPEGDGAYILMTNIYSSKNRWKEALKLRKKMKER 557
RF EPE + Y+ M ++ R +A +L +KM +
Sbjct: 684 RFGIEPETE-HYVCMVSLLGRAGRLNKARELIEKMPTK 720
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 139 VHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYV 198
VH + L + Y+ N L+ LY+ G + K+F +R+LVSW+T++ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE----KMPERNLVSWSTMVSACN 121
Query: 199 KMDYPTEAILSFFDMCQANL-RPDGMILVIVLSACSKLGDLS--LGIKIHRYITDNHFNL 255
E+++ F + + P+ IL + ACS L + ++ ++ + F+
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFD- 180
Query: 256 SPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRR 315
DV++ LID YLK GNI AR VFD +P K+ V+W +MI+G G+ +L +F +
Sbjct: 181 -RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 316 MQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGR 375
+ + PD + L VL++C+ + +LE GK +H ++ + + D + N L+D Y KCGR
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 376 IDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSA 435
+ A +F M +++ S+T ++ G + +A+++F+ MS+ G++PD +L++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 436 CS 437
C+
Sbjct: 360 CA 361
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 9/261 (3%)
Query: 253 FNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDI 312
+ L D ++ N LI++Y + G + ARKVF++MP +N+VSW++M++ H G ++E+L +
Sbjct: 73 WGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVV 132
Query: 313 FRRM-QGLGLKPDDFTLVCVLNSCANIGWLELGKW----VHTYLDKNHINTDGFIGNALV 367
F + P+++ L + +C+ + G+W + ++L K+ + D ++G L+
Sbjct: 133 FLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVKSGFDRDVYVGTLLI 190
Query: 368 DMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEV 427
D Y K G ID A VF ++ + ++T MI G G+++ +L +F ++ + + PD
Sbjct: 191 DFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGY 250
Query: 428 TFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKS 487
VLSACS +E G + + R Y L+ ++D + + G + A L
Sbjct: 251 ILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 488 MPLVPDAFVWGALLGACKIHA 508
MP + W LL K +A
Sbjct: 310 MP-NKNIISWTTLLSGYKQNA 329
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/596 (33%), Positives = 333/596 (55%), Gaps = 57/596 (9%)
Query: 22 LSLLHQSPRLESSKSVGQLKQFHAFIIKTG---SPQHQTQILYDKIISLSRGNEIEN--- 75
+++ H L S K++ L Q H IK G +++ IS+S
Sbjct: 3 IAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLL 62
Query: 76 LSLQNPQVYLYNFIIQCLSNAN-PLEAIALYREMLIKGLL-PNTYTLPYVLKACWQSQSL 133
L P +++N +++ S ++ P ++A++ EM+ KG + P++++ +V+KA +SL
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 134 RVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTL 193
R G Q+H ++K L S+++V TL+ +Y CG ++ K+F P +LV+W
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQP----NLVAWNA- 177
Query: 194 IQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKI-HRYITDNH 252
V++AC + D++ +I + + NH
Sbjct: 178 ----------------------------------VITACFRGNDVAGAREIFDKMLVRNH 203
Query: 253 FNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDI 312
+ N ++ Y+K G + SA+++F EMP ++ VSW++MI G+ H G F E+
Sbjct: 204 TSW-------NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLY 256
Query: 313 FRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAK 372
FR +Q G+ P++ +L VL++C+ G E GK +H +++K + + NAL+DMY++
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 373 CGRIDQAFGVFRSMK-CRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVG 431
CG + A VF M+ R + S+T+MI GLA+HG+ +A+ +F+EM+ G+ PD ++F+
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 432 VLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLV 491
+L ACSHAGL+EEG +F +M RVY+++P+ EHYGCMVDL+GR+G +++A D I MP+
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 492 PDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLR 551
P A VW LLGAC H +ELAE V + L +P G +L++N Y++ +WK+ +R
Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIR 496
Query: 552 KKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNH-GY 606
K M +++KKT SLVEV Y+F G+K +E ++ L EI+ + K+ GY
Sbjct: 497 KSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGY 552
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 355 bits (912), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 312/579 (53%), Gaps = 25/579 (4%)
Query: 41 KQFHAFIIKTGSPQHQT-----QILYDKIISLSRG------NEIENLSLQNPQVYLYNFI 89
+Q HA+ K G + LY K + E+EN+ L N + Y +
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG-L 467
Query: 90 IQCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALL 149
+ L N+ ++R+M I+ ++PN YT P +LK C + L +G+Q+H+ +KT
Sbjct: 468 LDDLRNS-----FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 150 SNVYVFNTLMRLYAVCG-LIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAIL 208
N YV + L+ +YA G L A L F A +D+VSWTT+I Y + ++ +A+
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRF-----AGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 209 SFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDM 268
+F M +R D + L +SAC+ L L G +IH + F S D+ NAL+ +
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF--SSDLPFQNALVTL 635
Query: 269 YLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTL 328
Y +CG I + F++ + ++WN++++G G +EAL +F RM G+ ++FT
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 329 VCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKC 388
+ + + ++ GK VH + K +++ + NAL+ MYAKCG I A F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 389 RDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKH 448
++ S+ A+I + HG +ALD F +M + P+ VT VGVLSACSH GLV++G +
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 449 FLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHA 508
F M+ Y L P+ EHY C+VD+ RAGL+ A + I+ MP+ PDA VW LL AC +H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 509 KVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLV 568
+E+ E +L+ EPE Y+L++N+Y+ +W R+KMKE+ VKK PG S +
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 569 EVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
EV + F GD++HP EI++ ++ ++ GY+
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 974
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 233/465 (50%), Gaps = 21/465 (4%)
Query: 31 LESSKSVGQLKQFHAFIIKTG--SPQHQTQILYDKIISLSRGNEIENLSL--QNPQ--VY 84
L+++ S+ + ++ H+ I+K G S ++ L+D L +G+ + + P+ ++
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFD--FYLFKGDLYGAFKVFDEMPERTIF 152
Query: 85 LYNFIIQCLSNANPL-EAIALYREMLIKGLLPNTYTLPYVLKAC-WQSQSLRVGQQVHAY 142
+N +I+ L++ N + E L+ M+ + + PN T VL+AC S + V +Q+HA
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 143 SMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDY 202
+ L + V N L+ LY+ G + ++F + +D SW +I K +
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR----LKDHSSWVAMISGLSKNEC 268
Query: 203 PTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIH 262
EAI F DM + P VLSAC K+ L +G ++H + F S D ++
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYVC 326
Query: 263 NALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLK 322
NAL+ +Y GN+ SA +F M ++ V++N++I GL+ G ++A+++F+RM GL+
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 323 PDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGV 382
PD TL ++ +C+ G L G+ +H Y K ++ I AL+++YAKC I+ A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 383 FRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLV 442
F + +V + M+V + + IF +M I P++ T+ +L C G +
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 443 EEGCKHFLDMSRVYNLQPQTEHYGC--MVDLFGRAGLIREALDLI 485
E G + S++ Q Y C ++D++ + G + A D++
Sbjct: 507 ELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 191/396 (48%), Gaps = 12/396 (3%)
Query: 111 KGLLPNTYTLPYVLKACWQSQ-SLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIK 169
+G+ PN TL ++L+ C ++ SL G+++H+ +K L SN + L Y G +
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 170 AVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVL 229
K+F +R + +W +I+ + E F M N+ P+ VL
Sbjct: 138 GAFKVFD----EMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 230 SACSKLGDLSLGI--KIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPV 287
AC + G ++ + +IH I + L + N LID+Y + G + AR+VFD + +
Sbjct: 194 EAC-RGGSVAFDVVEQIHARIL--YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 288 KNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWV 347
K+ SW +MI+GL+ EA+ +F M LG+ P + VL++C I LE+G+ +
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 348 HTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKA 407
H + K ++D ++ NALV +Y G + A +F +M RD +Y +I GL+ G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 408 WKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGC 467
KA+++F M G+EPD T ++ ACS G + G + + + G
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGA 429
Query: 468 MVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
+++L+ + I ALD V + +W +L A
Sbjct: 430 LLNLYAKCADIETALDYFLETE-VENVVLWNVMLVA 464
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 355 bits (912), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 290/477 (60%), Gaps = 11/477 (2%)
Query: 137 QQVHAYSMKTALLSNVYVFNTLMRLYAVC----GLIKAVHKLFHFRQHPQAQRDLVSWTT 192
+Q+HA+S++ + + + Y V + HK+F + P ++ W T
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI---NVFIWNT 90
Query: 193 LIQAYVKMDYPTEAILSFFDMCQANL-RPDGMILVIVLSACSKLGDLSLGIKIHRYITDN 251
LI+ Y ++ A + +M + L PD ++ A + + D+ LG IH + +
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 252 HFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALD 311
F +++ N+L+ +Y CG++ SA KVFD+MP K++V+WNS+I G G+ +EAL
Sbjct: 151 GFG--SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 312 IFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYA 371
++ M G+KPD FT+V +L++CA IG L LGK VH Y+ K + + N L+D+YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 372 KCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEM-SQVGIEPDEVTFV 430
+CGR+++A +F M ++ S+T++IVGLA++G +A+++F M S G+ P E+TFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 431 GVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPL 490
G+L ACSH G+V+EG ++F M Y ++P+ EH+GCMVDL RAG +++A + IKSMP+
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 491 VPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKL 550
P+ +W LLGAC +H +LAE +++ EP G Y+L++N+Y+S+ RW + K+
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448
Query: 551 RKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
RK+M VKK PG SLVEV +EF GDKSHP++ IY L E+ + ++ GY+
Sbjct: 449 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 229/404 (56%), Gaps = 22/404 (5%)
Query: 36 SVGQLKQFHAFIIKTGSPQHQTQI---LYDKIISL------SRGNEIENLSLQNPQVYLY 86
S+ +L+Q HAF I+ G ++ L ++SL S +++ + + V+++
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 87 NFIIQCLSN-ANPLEAIALYREMLIKGLL-PNTYTLPYVLKACWQSQSLRVGQQVHAYSM 144
N +I+ + N + A +LYREM + GL+ P+T+T P+++KA +R+G+ +H+ +
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 145 KTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPT 204
++ S +YV N+L+ LYA CG + + +K+F ++DLV+W ++I + + P
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVF----DKMPEKDLVAWNSVINGFAENGKPE 204
Query: 205 EAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNA 264
EA+ + +M ++PDG +V +LSAC+K+G L+LG ++H Y+ L+ ++ N
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNLHSSNV 262
Query: 265 LIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGL-GLKP 323
L+D+Y +CG + A+ +FDEM KN VSW S+I GL G KEA+++F+ M+ GL P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 324 DDFTLVCVLNSCANIGWLELG-KWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGV 382
+ T V +L +C++ G ++ G ++ ++ I +VD+ A+ G++ +A+
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 383 FRSMKCR-DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPD 425
+SM + +V + ++ +HG + L F+ + + +EP+
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPN 424
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 355 bits (912), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 328/637 (51%), Gaps = 75/637 (11%)
Query: 42 QFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENL-----SLQNPQVYLYNFIIQCLSNA 96
Q HA I+K+G+ Q+ I I S S N + S+ +P +Y ++ +I L+ A
Sbjct: 36 QAHARILKSGA-QNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 97 NPL-EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVF 155
++I ++ M GL+P+++ LP + K C + + +VG+Q+H S + L + +V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 156 NTLMRLYAVCGLIKAVHKLFHFRQHPQA-------------------------------Q 184
++ +Y CG + K+F +
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 185 RDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKI 244
++VSW ++ + + Y EA++ F + PD + + VL + L++G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 245 HRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVK---------------- 288
H Y+ L D + +A+IDMY K G++ +F++ +
Sbjct: 275 HGYVIKQ--GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 289 -------------------NVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLV 329
NVVSW S+IAG G+ EAL++FR MQ G+KP+ T+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 330 CVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCR 389
+L +C NI L G+ H + + H+ + +G+AL+DMYAKCGRI+ + VF M +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 390 DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHF 449
++ + +++ G ++HGKA + + IF + + ++PD ++F +LSAC GL +EG K+F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 450 LDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAK 509
MS Y ++P+ EHY CMV+L GRAG ++EA DLIK MP PD+ VWGALL +C++
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 510 VELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVE 569
V+LAEI E L EPE G Y+L++NIY++K W E +R KM+ +KK PGCS ++
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 570 VYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGY 606
V Y GDKSHP+ +I + +DEI + + G+
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 300/526 (57%), Gaps = 54/526 (10%)
Query: 131 QSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGL----IKAVHKLFHFRQHPQAQRD 186
+++R Q+HA +K+ + + ++R A L + HK+F+ Q PQ R+
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFN--QMPQ--RN 89
Query: 187 LVSWTTLIQAYVKMDYPTE--AILSFFDMCQAN-LRPDGMILVIVLSACSKLGDLSLGIK 243
SW T+I+ + + D AI F++M + P+ VL AC+K G + G +
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 244 IH-----------RYITDNHFNL--------------------------------SPDVF 260
IH ++ N + ++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 261 IHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLG 320
+ N +ID Y++ G+ +AR +FD+M ++VVSWN+MI+G + G FK+A+++FR M+
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 321 LKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAF 380
++P+ TLV VL + + +G LELG+W+H Y + + I D +G+AL+DMY+KCG I++A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 381 GVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAG 440
VF + +V +++AMI G AIHG+A A+D F +M Q G+ P +V ++ +L+ACSH G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 441 LVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGAL 500
LVEEG ++F M V L+P+ EHYGCMVDL GR+GL+ EA + I +MP+ PD +W AL
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 501 LGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVK 560
LGAC++ VE+ + V L+ P GAY+ ++N+Y+S+ W E ++R +MKE+ ++
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509
Query: 561 KTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGY 606
K PGCSL+++ G +EF D SHPK EI +L EI + + GY
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 220/477 (46%), Gaps = 102/477 (21%)
Query: 29 PRLESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLSL--------QN 80
P++ + +++ L Q HA IK+G Q + + +I+ +++ + L Q
Sbjct: 28 PQINNCRTIRDLSQIHAVFIKSG--QMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 81 PQ--VYLYNFIIQCLSNAN---PLEAIALYREMLIKGLL-PNTYTLPYVLKACWQSQSLR 134
PQ + +N II+ S ++ L AI L+ EM+ + PN +T P VLKAC ++ ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 135 VGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHF------------RQHPQ 182
G+Q+H ++K + +V + L+R+Y +CG +K LF+ R+
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 183 A-----------------------------QRDLVSWTTLIQAYVKMDYPTEAILSFFDM 213
QR +VSW T+I Y + +A+ F +M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 214 CQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCG 273
+ ++RP+ + LV VL A S+LG L LG +H Y D+ + D + +ALIDMY KCG
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI--DDVLGSALIDMYSKCG 323
Query: 274 NIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLN 333
I A VF+ +P +NV++W++MI G GQ +A+D F +M+ G++P D + +L
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 334 SCANIGWLELGKWVHTYLDKNHINTDGFIG-----NALVDMYAKCGRIDQAFGVFRSMKC 388
+C++ G +E G+ + + ++ DG +VD+ + G +D+A +M
Sbjct: 384 ACSHGGLVEEGRRYFSQM----VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP- 438
Query: 389 RDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEG 445
I+PD+V + +L AC G VE G
Sbjct: 439 ---------------------------------IKPDDVIWKALLGACRMQGNVEMG 462
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
+A+ ++REM + PN TL VL A + SL +G+ +H Y+ + + + + + L+
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316
Query: 160 RLYAVCGLI-KAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANL 218
+Y+ CG+I KA+H F + P + ++++W+ +I + +AI F M QA +
Sbjct: 317 DMYSKCGIIEKAIHV---FERLP--RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 219 RPDGMILVIVLSACSKLGDLSLGIKIHRYITD--NHFNLSPDVFIHNALIDMYLKCGNIP 276
RP + + +L+ACS G + G RY + + L P + + ++D+ + G +
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEG---RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 277 SARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCA 336
A + MP+ KPDD +L +C
Sbjct: 429 EAEEFILNMPI----------------------------------KPDDVIWKALLGACR 454
Query: 337 NIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDV 391
G +E+GK V L + + D AL +MYA G + + MK +D+
Sbjct: 455 MQGNVEMGKRVANIL-MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 215/639 (33%), Positives = 340/639 (53%), Gaps = 56/639 (8%)
Query: 10 GSRYNDINTFQQLSLLHQS-PRLESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLS 68
GS+ + Q L L HQS LE+ S Q KQ A I++ + ++I S
Sbjct: 19 GSKTTKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPM--SRLIFFS 76
Query: 69 RGNEIENLSLQ---------NPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYT 119
ENL L NP V++YN +I +S++ E LY M+ + P+ T
Sbjct: 77 AITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN-ECFGLYSSMIRHRVSPDRQT 135
Query: 120 LPYVLKACWQSQSLRVGQQVHAYSMKTALLS-NVYVFNTLMRLYAVCGLIKAVHKLFHFR 178
Y++KA S L +Q+H + + + LS Y++N+L++ Y G K+F
Sbjct: 136 FLYLMKA---SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARM 192
Query: 179 QHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDL 238
HP D+ S+ +I Y K + EA+ +F M + PD ++ +L C L D+
Sbjct: 193 PHP----DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDI 248
Query: 239 SLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKC-------------------------- 272
LG +H +I S ++ + NAL+DMY KC
Sbjct: 249 RLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVV 308
Query: 273 -----GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEAL-DIFRRMQGL-GLKPDD 325
G++ +A+ VFD+MP +++VSWNS++ G + +G + + ++F M + +KPD
Sbjct: 309 GFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368
Query: 326 FTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRS 385
T+V +++ AN G L G+WVH + + + D F+ +AL+DMY KCG I++AF VF++
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 386 MKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEG 445
+DV +T+MI GLA HG +AL +F M + G+ P+ VT + VL+ACSH+GLVEEG
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
Query: 446 CKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLI-KSMPLVPDAFVWGALLGAC 504
F M + P+TEHYG +VDL RAG + EA D++ K MP+ P +WG++L AC
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSAC 548
Query: 505 KIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPG 564
+ +E AE+ + L++ EPE +G Y+L++NIY++ RW + K R+ M+ R VKKT G
Sbjct: 549 RGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAG 608
Query: 565 CSLVEVYGEFYEFRKGDK-SHPKTLEIYKLLDEIMHQSK 602
S V + F +K +HP+ EI ++L + ++ K
Sbjct: 609 YSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 319/592 (53%), Gaps = 46/592 (7%)
Query: 60 LYDKIISLSRGNEI-ENLSLQNPQVYLYNFIIQCLSN-ANPLEAIALYREMLIK-GLLPN 116
+Y + SLS ++ + +S+ + V +N II+ + P A+ ++ M + G P+
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWD--VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPD 228
Query: 117 TYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVH---- 172
TL VL C + +G+Q+H +++ + ++ N++V N L+ +YA CG++ +
Sbjct: 229 NITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFS 288
Query: 173 ---------------------------KLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTE 205
+LF Q + + D+V+W+ I Y + E
Sbjct: 289 NMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 206 AILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNL-----SPDVF 260
A+ M + ++P+ + L+ VLS C+ +G L G +IH Y +L +
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 261 IHNALIDMYLKCGNIPSARKVFDEMPVK--NVVSWNSMIAGLTHRGQFKEALDIFRRM-- 316
+ N LIDMY KC + +AR +FD + K +VV+W MI G + G +AL++ M
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 317 QGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDG-FIGNALVDMYAKCGR 375
+ +P+ FT+ C L +CA++ L +GK +H Y +N N F+ N L+DMYAKCG
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 376 IDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSA 435
I A VF +M ++ ++T+++ G +HG +AL IF EM ++G + D VT + VL A
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 436 CSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAF 495
CSH+G++++G ++F M V+ + P EHY C+VDL GRAG + AL LI+ MP+ P
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 496 VWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMK 555
VW A L C+IH KVEL E E + DG+Y L++N+Y++ RWK+ ++R M+
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMR 708
Query: 556 ERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
+ VKK PGCS VE F GDK+HP EIY++L + M + K+ GY+
Sbjct: 709 HKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 282/585 (48%), Gaps = 62/585 (10%)
Query: 4 PLTVASGSRYNDINTFQQLSLLHQSPRLESSKSVGQLKQFH----AFIIKTGSPQHQTQI 59
P A +Y ++ F + P + K++ Q+K H +F I T +
Sbjct: 8 PNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLIS 67
Query: 60 LYDKIISLSRG-NEIENLSLQNPQVYLYNFIIQCLS-NANPLEAIALYREMLIKGLLPNT 117
Y + LS + + + VY +N +I+ N + + L+ M P+
Sbjct: 68 TYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDN 127
Query: 118 YTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHF 177
YT P+V KAC + S+R G+ HA S+ T +SNV+V N L+ +Y+ C + K+F
Sbjct: 128 YTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF-- 185
Query: 178 RQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMC-QANLRPDGMILVIVLSACSKLG 236
+ D+VSW ++I++Y K+ P A+ F M + RPD + LV VL C+ LG
Sbjct: 186 --DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 237 DLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSM 296
SLG ++H + + + ++F+ N L+DMY KCG + A VF M VK+VVSWN+M
Sbjct: 244 THSLGKQLHCFAVTS--EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 297 IAGLTHRGQFKEALDIFRRMQ---------------------GL--------------GL 321
+AG + G+F++A+ +F +MQ GL G+
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 322 KPDDFTLVCVLNSCANIGWLELGKWVHTY-------LDKNHINTDGFIGNALVDMYAKCG 374
KP++ TL+ VL+ CA++G L GK +H Y L KN + + N L+DMYAKC
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 375 RIDQAFGVFRSM--KCRDVYSYTAMIVGLAIHGKAWKALDIFSEM--SQVGIEPDEVTFV 430
++D A +F S+ K RDV ++T MI G + HG A KAL++ SEM P+ T
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 431 GVLSACSHAGLVEEGCK-HFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMP 489
L AC+ + G + H + N P C++D++ + G I +A + +M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM- 539
Query: 490 LVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILM 534
+ + W +L+ +H E A + + + R + DG +L+
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 131/300 (43%), Gaps = 41/300 (13%)
Query: 265 LIDMYLKCGNIPSARKVFDEMPVKN--VVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLK 322
LI Y+ G + A + P + V WNS+I G + L +F M L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 323 PDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGV 382
PD++T V +C I + G+ H ++ F+GNALV MY++C + A V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 383 FRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMS-QVGIEPDEVTFVGVLSACSHAGL 441
F M DV S+ ++I A GK AL++FS M+ + G PD +T V VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 442 VEEGCKHFLDMSRVYNLQPQTEHYG-CMVDLFGRAGLIREALDLIKSMPLVPDAFVWGAL 500
G + L V + Q G C+VD++ + G++ EA + +M V D W A+
Sbjct: 245 HSLGKQ--LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS-VKDVVSWNAM 301
Query: 501 LGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVK 560
+ YS R+++A++L +KM+E K+K
Sbjct: 302 VAG----------------------------------YSQIGRFEDAVRLFEKMQEEKIK 327
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/512 (37%), Positives = 296/512 (57%), Gaps = 16/512 (3%)
Query: 99 LEAIALYREMLIKGLLP-NTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNT 157
+E+I ++R+++ + +T TL +L A + Q LR+G Q+H+ + KT S+ YV
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 158 LMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFD---MC 214
+ LY+ CG IK LF + P D+V++ +I Y + TE LS F +
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKP----DIVAYNAMIHGYTS-NGETELSLSLFKELMLS 316
Query: 215 QANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGN 274
A LR ++ ++ +S G L L IH Y ++F LS + AL +Y K
Sbjct: 317 GARLRSSTLVSLVPVS-----GHLMLIYAIHGYCLKSNF-LS-HASVSTALTTVYSKLNE 369
Query: 275 IPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNS 334
I SARK+FDE P K++ SWN+MI+G T G ++A+ +FR MQ P+ T+ C+L++
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 335 CANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSY 394
CA +G L LGKWVH + + ++ AL+ MYAKCG I +A +F M ++ ++
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 395 TAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSR 454
MI G +HG+ +AL+IF EM GI P VTF+ VL ACSHAGLV+EG + F M
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 455 VYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAE 514
Y +P +HY CMVD+ GRAG ++ AL I++M + P + VW LLGAC+IH LA
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 515 IVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEF 574
V E L +P+ G ++L++NI+S+ + +A +R+ K+RK+ K PG +L+E+
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETP 669
Query: 575 YEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGY 606
+ F GD+SHP+ EIY+ L+++ + + GY
Sbjct: 670 HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGY 701
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 227/489 (46%), Gaps = 22/489 (4%)
Query: 34 SKSVGQLKQFHAFIIKTGSPQ------HQTQILYDKIISLSRGNEIENLSLQNPQVYLYN 87
S S+ L Q HA II G TQ L D + ++ +I LS+Q P V+L+N
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSD-LGAIYYARDI-FLSVQRPDVFLFN 87
Query: 88 FIIQCLS-NANPLEAIALYREML-IKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMK 145
+++ S N +P +++++ + L PN+ T + + A + R G+ +H ++
Sbjct: 88 VLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 146 TALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTE 205
S + + + ++++Y ++ K+F ++D + W T+I Y K + E
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVF----DRMPEKDTILWNTMISGYRKNEMYVE 203
Query: 206 AILSFFDMC-QANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNA 264
+I F D+ ++ R D L+ +L A ++L +L LG++IH T ++
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT--GCYSHDYVLTG 261
Query: 265 LIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPD 324
I +Y KCG I +F E ++V++N+MI G T G+ + +L +F+ + G +
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 325 DFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFR 384
TLV ++ G L L +H Y K++ + + AL +Y+K I+ A +F
Sbjct: 322 SSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 385 SMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEE 444
+ + S+ AMI G +G A+ +F EM + P+ VT +LSAC+ G +
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 445 GCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGAC 504
G K D+ R + + ++ ++ + G I EA L M + W ++
Sbjct: 439 G-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGY 496
Query: 505 KIHAKVELA 513
+H + + A
Sbjct: 497 GLHGQGQEA 505
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 196/464 (42%), Gaps = 43/464 (9%)
Query: 129 QSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLV 188
+S S+ Q HA + +++ + L + + G I +F Q P D+
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP----DVF 84
Query: 189 SWTTLIQAYVKMDYPTEAILSFFDMCQA-NLRPDGMILVIVLSACSKLGDLSLGIKIH-R 246
+ L++ + + P ++ F + ++ +L+P+ +SA S D G IH +
Sbjct: 85 LFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 247 YITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQF 306
+ D ++ + + ++ MY K + ARKVFD MP K+ + WN+MI+G +
Sbjct: 145 AVVDG---CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 307 KEALDIFRRMQGLG-LKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNA 365
E++ +FR + + D TL+ +L + A + L LG +H+ K + ++
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 366 LVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPD 425
+ +Y+KCG+I +FR + D+ +Y AMI G +G+ +L +F E+ G
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 426 EVTFVGVLSACSHAGL---VEEGC--KHFLDMSRV--------------------YNLQP 460
T V ++ H L + C +FL + V ++ P
Sbjct: 322 SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 461 QTE--HYGCMVDLFGRAGLIREALDLIKSM---PLVPDAFVWGALLGACKIHAKVELAEI 515
+ + M+ + + GL +A+ L + M P+ +L AC + L +
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 516 VMENLVRFEPEGDGAYI--LMTNIYSSKNRWKEALKLRKKMKER 557
V +LVR Y+ + +Y+ EA +L M ++
Sbjct: 442 V-HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 327/589 (55%), Gaps = 24/589 (4%)
Query: 33 SSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRG-NEIENL-----SLQNPQVYLY 86
+S VG + F++KTG + + I +G N EN + V +
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 87 NFII-QCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMK 145
+I +C+ P EAI + +M++ G + +TL V AC + ++L +G+Q+H+++++
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR 297
Query: 146 TALLSNVYVFNTLMRLYAVC---GLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVK-MD 201
+ L+ +V +L+ +YA C G + K+F + ++SWT LI Y+K +
Sbjct: 298 SGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRME----DHSVMSWTALITGYMKNCN 351
Query: 202 YPTEAILSFFDM-CQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHF--NLSPD 258
TEAI F +M Q ++ P+ AC L D +G + + F L+ +
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG----KQVLGQAFKRGLASN 407
Query: 259 VFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQG 318
+ N++I M++K + A++ F+ + KN+VS+N+ + G F++A + +
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 319 LGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQ 378
L FT +L+ AN+G + G+ +H+ + K ++ + + NAL+ MY+KCG ID
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 379 AFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSH 438
A VF M+ R+V S+T+MI G A HG A + L+ F++M + G++P+EVT+V +LSACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 439 AGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWG 498
GLV EG +HF M + ++P+ EHY CMVDL RAGL+ +A + I +MP D VW
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 499 ALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERK 558
LGAC++H+ EL ++ ++ +P AYI ++NIY+ +W+E+ ++R+KMKER
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 559 VKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
+ K GCS +EV + ++F GD +HP +IY LD ++ + K GY+
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYV 756
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 209/451 (46%), Gaps = 48/451 (10%)
Query: 94 SNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTA-LLSNV 152
+N L+AI ++ E L GL+PN Y V++AC S + VG+ + MKT S+V
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 153 YVFNTLMRLYAVC-GLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFF 211
V +L+ ++ + +K+F ++ ++V+WT +I ++M +P EAI F
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVF----DKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 212 DMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLK 271
DM + D L V SAC++L +LSLG ++H + + L DV +L+DMY K
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS--GLVDDV--ECSLVDMYAK 314
Query: 272 C---GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQF-KEALDIFRRMQGLG-LKPDDF 326
C G++ RKVFD M +V+SW ++I G EA+++F M G ++P+ F
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 327 TLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSM 386
T +C N+ +GK V K + ++ + N+++ M+ K R++ A F S+
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 387 KCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEG- 445
+++ SY + G + +A + SE+++ + TF +LS ++ G + +G
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 446 -----------------CKHFLDM----------SRVYNLQPQTE--HYGCMVDLFGRAG 476
C + M SRV+N + M+ F + G
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 477 LIREALDLIKSM---PLVPDAFVWGALLGAC 504
L+ M + P+ + A+L AC
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 183/353 (51%), Gaps = 14/353 (3%)
Query: 95 NANPLE-AIALYREMLIKGLLP-NTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNV 152
NA L A++ M G+ P ++ T +LK+C +++ R+G+ VHA ++ + +
Sbjct: 38 NAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS 97
Query: 153 YVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFD 212
++N+L+ LY+ G +F + +RD+VSW+ ++ Y +AI F +
Sbjct: 98 VLYNSLISLYSKSGDSAKAEDVFETMRRF-GKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 213 MCQANLRPDGMILVIVLSACSKLGDLSLG-IKIHRYITDNHFNLSPDVFIHNALIDMYLK 271
+ L P+ V+ ACS + +G + + + HF DV + +LIDM++K
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF--ESDVCVGCSLIDMFVK 214
Query: 272 CGN-IPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVC 330
N +A KVFD+M NVV+W MI G +EA+ F M G + D FTL
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 331 VLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKC---GRIDQAFGVFRSMK 387
V ++CA + L LGK +H++ ++ + D + +LVDMYAKC G +D VF M+
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 388 CRDVYSYTAMIVGLAIHGK-AWKALDIFSEM-SQVGIEPDEVTFVGVLSACSH 438
V S+TA+I G + A +A+++FSEM +Q +EP+ TF AC +
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 311/572 (54%), Gaps = 68/572 (11%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
+AI + +M+ +G+ P +TL VL + ++ + G++VH++ +K L NV V N+L+
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 160 RLYAVCG---------------------LIKAVH--------KLFHFRQHPQAQRDLVSW 190
+YA CG + A+H + F Q A+RD+V+W
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ--MAERDIVTW 246
Query: 191 TTLIQAYVKMDYPTEAILSFFDMCQANL-RPDGMILVIVLSACSKLGDLSLGIKIHRYIT 249
++I + + Y A+ F M + +L PD L VLSAC+ L L +G +IH +I
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 250 DNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKN-------------------- 289
F++S V NALI MY +CG + +AR++ ++ K+
Sbjct: 307 TTGFDISGIVL--NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 290 -------------VVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCA 336
VV+W +MI G G + EA+++FR M G G +P+ +TL +L+ +
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 337 NIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKC-RDVYSYT 395
++ L GK +H K+ + NAL+ MYAK G I A F ++C RD S+T
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 396 AMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRV 455
+MI+ LA HG A +AL++F M G+ PD +T+VGV SAC+HAGLV +G ++F M V
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 456 YNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEI 515
+ P HY CMVDLFGRAGL++EA + I+ MP+ PD WG+LL AC++H ++L ++
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 604
Query: 516 VMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFY 575
E L+ EPE GAY + N+YS+ +W+EA K+RK MK+ +VKK G S +EV + +
Sbjct: 605 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Query: 576 EFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
F D +HP+ EIY + +I + K GY+
Sbjct: 665 VFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYV 696
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 211/508 (41%), Gaps = 132/508 (25%)
Query: 125 KACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFH-------- 176
K+ +S Q VH +K+ L+ +VY+ N LM +Y+ G KLF
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 177 ---------------------FRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQ 215
F Q PQ RD VSWTT+I Y + +AI DM +
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQ--RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 216 ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNI 275
+ P L VL++ + + G K+H +I L +V + N+L++MY KCG+
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK--LGLRGNVSVSNSLLNMYAKCGDP 197
Query: 276 PSARKVFDEMPVKNV-------------------------------VSWNSMIAGLTHRG 304
A+ VFD M V+++ V+WNSMI+G RG
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 305 QFKEALDIFRRM-QGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIG 363
ALDIF +M + L PD FTL VL++CAN+ L +GK +H+++ + G +
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 364 NALVDMYAKCGRID---------------------------------QAFGVFRSMKCRD 390
NAL+ MY++CG ++ QA +F S+K RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 391 VYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACS-----------HA 439
V ++TAMIVG HG +A+++F M G P+ T +LS S H
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 440 GLVEEG-----------------CKHFLDMSRVYNL---QPQTEHYGCMVDLFGRAGLIR 479
V+ G + SR ++L + T + M+ + G
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 480 EALDLIKSM---PLVPDAFVWGALLGAC 504
EAL+L ++M L PD + + AC
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSAC 525
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 129/244 (52%), Gaps = 8/244 (3%)
Query: 60 LYDKIISLSRGNEIENL--SLQNPQVYLYN-FIIQCLSNANPLEAIALYREMLIKGLLPN 116
L D I L N+ +N+ SL++ V + I+ + + EAI L+R M+ G PN
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 117 TYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFH 176
+YTL +L SL G+Q+H ++K+ + +V V N L+ +YA G I + + F
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 177 FRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLG 236
+ +RD VSWT++I A + + EA+ F M LRPD + V V SAC+ G
Sbjct: 473 L---IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 237 DLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVK-NVVSWNS 295
++ G + + D + P + + ++D++ + G + A++ ++MP++ +VV+W S
Sbjct: 530 LVNQGRQYFDMMKDVD-KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 296 MIAG 299
+++
Sbjct: 589 LLSA 592
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 286/496 (57%), Gaps = 11/496 (2%)
Query: 112 GLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAV 171
GL ++ T ++K C ++++ G + + +++ N L+ +Y L+
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 172 HKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSA 231
H+LF Q PQ R+++SWTT+I AY K +A+ M + N+RP+ VL +
Sbjct: 116 HQLFD--QMPQ--RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 232 CSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVV 291
C+ + D+ + +H I L DVF+ +ALID++ K G A VFDEM + +
Sbjct: 172 CNGMSDVRM---LHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 292 SWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYL 351
WNS+I G + AL++F+RM+ G + TL VL +C + LELG H ++
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 352 DKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKAL 411
K + D + NALVDMY KCG ++ A VF MK RDV +++ MI GLA +G + +AL
Sbjct: 287 VK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 412 DIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDL 471
+F M G +P+ +T VGVL ACSHAGL+E+G +F M ++Y + P EHYGCM+DL
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 472 FGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAY 531
G+AG + +A+ L+ M PDA W LLGAC++ + LAE + ++ +PE G Y
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY 464
Query: 532 ILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIY 591
L++NIY++ +W ++R +M++R +KK PGCS +EV + + F GD SHP+ +E+
Sbjct: 465 TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVS 524
Query: 592 KLLDEIMHQSKNHGYI 607
K L++++H+ GY+
Sbjct: 525 KKLNQLIHRLTGIGYV 540
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 172/347 (49%), Gaps = 20/347 (5%)
Query: 91 QCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLS 150
+C + LE + L ML + PN YT VL++C +R+ +H +K L S
Sbjct: 139 KCKIHQKALELLVL---MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLES 192
Query: 151 NVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSF 210
+V+V + L+ ++A G + +F D + W ++I + + A+ F
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVF----DEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 211 FDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYL 270
M +A + L VL AC+ L L LG++ H +I D+ ++NAL+DMY
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV----KYDQDLILNNALVDMYC 304
Query: 271 KCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVC 330
KCG++ A +VF++M ++V++W++MI+GL G +EAL +F RM+ G KP+ T+V
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVG 364
Query: 331 VLNSCANIGWLELGKWVHTYLDKNHINTDGFIGN--ALVDMYAKCGRIDQAFGVFRSMKC 388
VL +C++ G LE G W + K D + ++D+ K G++D A + M+C
Sbjct: 365 VLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMEC 423
Query: 389 R-DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLS 434
D ++ ++ + L ++ + ++P++ +LS
Sbjct: 424 EPDAVTWRTLLGACRVQRNM--VLAEYAAKKVIALDPEDAGTYTLLS 468
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 19/306 (6%)
Query: 28 SPRLESSKSVGQLKQFHAFIIKTG--SPQHQTQILYDKIISLSRGNEIENLSLQNPQV-- 83
S L S + ++ H IIK G S L D L G + LS+ + V
Sbjct: 166 SSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL--GEPEDALSVFDEMVTG 223
Query: 84 --YLYNFIIQCLS-NANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVH 140
++N II + N+ A+ L++ M G + TL VL+AC L +G Q H
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 141 AYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKM 200
+ +K ++ + N L+ +Y CG ++ ++F + +RD+++W+T+I +
Sbjct: 284 VHIVKYD--QDLILNNALVDMYCKCGSLEDALRVF----NQMKERDVITWSTMISGLAQN 337
Query: 201 DYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVF 260
Y EA+ F M + +P+ + +V VL ACS G L G R + + + P
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK-KLYGIDPVRE 396
Query: 261 IHNALIDMYLKCGNIPSARKVFDEMPVK-NVVSWNSMIAGLTHRGQFKEALDIFRRMQGL 319
+ +ID+ K G + A K+ +EM + + V+W +++ R Q L + + +
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC--RVQRNMVLAEYAAKKVI 454
Query: 320 GLKPDD 325
L P+D
Sbjct: 455 ALDPED 460
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 300 LTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTD 359
L ++ A+ +Q GL D T ++ C + + G + +L N
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 360 GFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQ 419
F+ N L++MY K ++ A +F M R+V S+T MI + KAL++ M +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 420 VGIEPDEVTFVGVLSACS--------HAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDL 471
+ P+ T+ VL +C+ H G+++EG L+ ++D+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDV 203
Query: 472 FGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELA 513
F + G +AL + M + DA VW +++G +++ ++A
Sbjct: 204 FAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVA 244
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 307/524 (58%), Gaps = 9/524 (1%)
Query: 86 YNFIIQCLS-NANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQ-SQSLRVGQQVHAYS 143
+N +I ++ N +EA+ L+ ++L GL P+ YT+ VLKA + L + +QVH ++
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 144 MKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYP 203
+K +S+ +V L+ Y+ +K LF + DLV+W ++ Y +
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-----RHNFDLVAWNAMMAGYTQSHDG 498
Query: 204 TEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHN 263
+ + F M + R D L V C L ++ G ++H Y + ++L D+++ +
Sbjct: 499 HKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSS 556
Query: 264 ALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKP 323
++DMY+KCG++ +A+ FD +PV + V+W +MI+G G+ + A +F +M+ +G+ P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 324 DDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVF 383
D+FT+ + + + + LE G+ +H K + D F+G +LVDMYAKCG ID A+ +F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 384 RSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVE 443
+ ++ ++ ++ AM+VGLA HG+ + L +F +M +GI+PD+VTF+GVLSACSH+GLV
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 444 EGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
E KH M Y ++P+ EHY C+ D GRAGL+++A +LI+SM + A ++ LL A
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796
Query: 504 CKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTP 563
C++ E + V L+ EP AY+L++N+Y++ ++W E R MK KVKK P
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856
Query: 564 GCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
G S +EV + + F D+S+ +T IY+ + +++ K GY+
Sbjct: 857 GFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 199/409 (48%), Gaps = 16/409 (3%)
Query: 105 YREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAV 164
+ +M+ + + T +L + SL +GQQVH ++K L + V N+L+ +Y
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY-- 360
Query: 165 CGLIKAVHKLFHFRQ---HPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPD 221
C L K F F + ++RDL+SW ++I + EA+ F + + L+PD
Sbjct: 361 CKLRK-----FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 222 GMILVIVLSACSKLGD-LSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARK 280
+ VL A S L + LSL ++H + N D F+ ALID Y + + A
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAI--KINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 281 VFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGW 340
+F+ ++V+WN+M+AG T + L +F M G + DDFTL V +C +
Sbjct: 474 LFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 341 LELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVG 400
+ GK VH Y K+ + D ++ + ++DMY KCG + A F S+ D ++T MI G
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 401 LAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQP 460
+G+ +A +FS+M +G+ PDE T + A S +E+G + + ++ N
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL-NCTN 651
Query: 461 QTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAK 509
+VD++ + G I +A L K + ++ + W A+L H +
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGE 699
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 8/306 (2%)
Query: 210 FFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMY 269
F DM ++++ D + +++L+ K+ L+LG ++H +L + + N+LI+MY
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM--LTVSNSLINMY 360
Query: 270 LKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLV 329
K AR VFD M ++++SWNS+IAG+ G EA+ +F ++ GLKPD +T+
Sbjct: 361 CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT 420
Query: 330 CVLNSCANI-GWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKC 388
VL + +++ L L K VH + K + +D F+ AL+D Y++ + +A +F
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 389 RDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCK- 447
D+ ++ AM+ G K L +F+ M + G D+ T V C + +G +
Sbjct: 481 -DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 448 HFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIH 507
H + Y+L ++D++ + G + A S+P VPD W ++ C +
Sbjct: 540 HAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIP-VPDDVAWTTMISGCIEN 596
Query: 508 AKVELA 513
+ E A
Sbjct: 597 GEEERA 602
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
Query: 237 DLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSM 296
DL LG H I F +P+ F+ N LI MY KCG++ AR+VFD+MP +++VSWNS+
Sbjct: 54 DLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 297 IAGLTHRGQ-----FKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYL 351
+A + ++A +FR ++ + TL +L C + G++ + H Y
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 352 DKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKAL 411
K ++ D F+ ALV++Y K G++ + +F M RDV + M+ G +A+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 412 DIFSEMSQVGIEPDEVTF 429
D+ S G+ P+E+T
Sbjct: 232 DLSSAFHSSGLNPNEITL 249
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 172/411 (41%), Gaps = 48/411 (11%)
Query: 97 NPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFN 156
N +A L+R + + + TL +LK C S + + H Y+ K L + +V
Sbjct: 125 NIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 157 TLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQA 216
L+ +Y G +K LF RD+V W +++AY++M + EAI +
Sbjct: 185 ALVNIYLKFGKVKEGKVLFE----EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 217 NLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIP 276
L P+ + L ++ GD S ++ + N + ++ N + YL
Sbjct: 241 GLNPNEITLRLLARIS---GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL------ 291
Query: 277 SARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCA 336
H GQ+ L F M ++ D T + +L +
Sbjct: 292 -------------------------HSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326
Query: 337 NIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTA 396
+ L LG+ VH K ++ + N+L++MY K + A VF +M RD+ S+ +
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 397 MIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSH----AGLVEEGCKHFLDM 452
+I G+A +G +A+ +F ++ + G++PD+ T VL A S L ++ H + +
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 453 SRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
+ V + T ++D + R ++EA L + D W A++
Sbjct: 447 NNVSDSFVST----ALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAG 491
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 124 LKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQA 183
L+ S L +G+ HA + ++ N L+ +Y+ CG + ++F
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFD----KMP 101
Query: 184 QRDLVSWTTLIQAYVK-----MDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDL 238
RDLVSW +++ AY + ++ +A L F + Q + M L +L C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 239 SLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIA 298
H Y L D F+ AL+++YLK G + + +F+EMP ++VV WN M+
Sbjct: 162 WASESFHGYAC--KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 299 GLTHRGQFKEALDIFRRMQGLGLKPDDFTL 328
G +EA+D+ GL P++ TL
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 154/336 (45%), Gaps = 19/336 (5%)
Query: 36 SVGQLKQFHAFIIKTGSPQH---QTQIL--YDKIISLSRGNEIENLSLQNPQVYLYNFII 90
++ Q KQ HA+ IK+G + IL Y K +S + S+ P + +I
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA-QFAFDSIPVPDDVAWTTMI 590
Query: 91 Q-CLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALL 149
C+ N A ++ +M + G+LP+ +T+ + KA +L G+Q+HA ++K
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 150 SNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILS 209
++ +V +L+ +YA CG I + LF + ++ +W ++ + E +
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIE----MMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 210 FFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMY 269
F M ++PD + + VLSACS G +S K H + + P++ ++ L D
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK-HMRSMHGDYGIKPEIEHYSCLADAL 765
Query: 270 LKCGNIPSARKVFDEMPVKNVVS-WNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTL 328
+ G + A + + M ++ S + +++A +G + + ++ L L+P D +
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKL--LELEPLDSSA 823
Query: 329 VCVLNS--CANIGWLELGKWVHTYLDKNHINTD-GF 361
+L++ A W E+ K T + + + D GF
Sbjct: 824 YVLLSNMYAAASKWDEM-KLARTMMKGHKVKKDPGF 858
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 292/516 (56%), Gaps = 7/516 (1%)
Query: 95 NANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYV 154
N + +++L+ EM +G+ PN +T LKAC +L G Q+H + +K V V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 155 FNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMC 214
N+L+ +Y+ CG I K+F R L+SW +I +V Y ++A+ +F M
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFR----RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 215 QANL--RPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKC 272
+AN+ RPD L +L ACS G + G +IH ++ + F+ I +L+D+Y+KC
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 273 GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVL 332
G + SARK FD++ K ++SW+S+I G G+F EA+ +F+R+Q L + D F L ++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 333 NSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVY 392
A+ L GK + K + + N++VDMY KCG +D+A F M+ +DV
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 393 SYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDM 452
S+T +I G HG K++ IF EM + IEPDEV ++ VLSACSH+G+++EG + F +
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 453 SRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVEL 512
+ ++P+ EHY C+VDL GRAG ++EA LI +MP+ P+ +W LL C++H +EL
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 513 AEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYG 572
+ V + L+R + + Y++M+N+Y W E R+ + +KK G S VE+
Sbjct: 501 GKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIER 560
Query: 573 EFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNH-GYI 607
E + FR G+ SHP T I + L E + + GY+
Sbjct: 561 EVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 220/451 (48%), Gaps = 16/451 (3%)
Query: 113 LLPNTY-TLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAV 171
++PN L +L+ C + G QVH Y +K+ N+ N L+ +Y C
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 172 HKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFF-DMCQANLRPDGMILVIVLS 230
+K+F +R++VSW+ L+ +V ++ + LS F +M + + P+ L
Sbjct: 61 YKVF----DSMPERNVVSWSALMSGHV-LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLK 115
Query: 231 ACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNV 290
AC L L G++IH + F + +V N+L+DMY KCG I A KVF + +++
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEV--GNSLVDMYSKCGRINEAEKVFRRIVDRSL 173
Query: 291 VSWNSMIAGLTHRGQFKEALDIFRRMQGLGLK--PDDFTLVCVLNSCANIGWLELGKWVH 348
+SWN+MIAG H G +ALD F MQ +K PD+FTL +L +C++ G + GK +H
Sbjct: 174 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 233
Query: 349 TYLDKN--HINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGK 406
+L ++ H + I +LVD+Y KCG + A F +K + + S++++I+G A G+
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 407 AWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYG 466
+A+ +F + ++ + D ++ + L+ +G K ++ +T
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLN 352
Query: 467 CMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPE 526
+VD++ + GL+ EA M L D W ++ H + + + ++R E
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 527 GDG-AYILMTNIYSSKNRWKEALKLRKKMKE 556
D Y+ + + S KE +L K+ E
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 305/542 (56%), Gaps = 58/542 (10%)
Query: 32 ESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGN-EIENLS--------LQNPQ 82
E +KS+ +++Q HAF++KTG H T K+++ + N E + +S + +P
Sbjct: 47 ERAKSLTEIQQAHAFMLKTG-LFHDT-FSASKLVAFAATNPEPKTVSYAHSILNRIGSPN 104
Query: 83 VYLYNFIIQCLSNAN-PLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHA 141
+ +N +I+ +N++ P A+ ++REML+ + P+ Y+ +VLKAC G+Q+H
Sbjct: 105 GFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 142 YSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMD 201
+K+ L+++V+V NTL+ +Y G + K+ + P RD VSW +L+ AY++
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLD--RMPV--RDAVSWNSLLSAYLEKG 220
Query: 202 YPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFI 261
EA F +M + N+
Sbjct: 221 LVDEARALFDEMEERNVES----------------------------------------- 239
Query: 262 HNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRM-QGLG 320
N +I Y G + A++VFD MPV++VVSWN+M+ H G + E L++F +M
Sbjct: 240 WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 321 LKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAF 380
KPD FTLV VL++CA++G L G+WVH Y+DK+ I +GF+ ALVDMY+KCG+ID+A
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKAL 359
Query: 381 GVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAG 440
VFR+ RDV ++ ++I L++HG AL+IFSEM G +P+ +TF+GVLSAC+H G
Sbjct: 360 EVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
Query: 441 LVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGAL 500
++++ K F MS VY ++P EHYGCMVDL GR G I EA +L+ +P + + +L
Sbjct: 420 MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESL 479
Query: 501 LGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVK 560
LGACK ++E AE + L+ Y M+N+Y+S RW++ + R+ M+ +V
Sbjct: 480 LGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVN 539
Query: 561 KT 562
++
Sbjct: 540 RS 541
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 218/606 (35%), Positives = 319/606 (52%), Gaps = 19/606 (3%)
Query: 15 DINTFQQLSLLHQSPRLESSKSVG--QLKQFHAFIIKTGSPQHQTQI------LYDKIIS 66
D++ + LL P ++ VG + ++ H +I TG I +Y K S
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 67 LSRGNEIENLSLQNPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKA 126
++ + V + I N +EA+ Y+ M +LP ++TL L +
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 127 CWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRD 186
C + ++GQQ+H S+K + NV V N LM LYA G + K+F + D
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS----SMPEHD 480
Query: 187 LVSWTTLIQAYVKMDYP-TEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIH 245
VSW ++I A + + EA++ F + +A + + + VLSA S L LG +IH
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 246 RYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVK-NVVSWNSMIAGLTHRG 304
N N++ + NALI Y KCG + K+F M + + V+WNSMI+G H
Sbjct: 541 GLALKN--NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 305 QFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGN 364
+ALD+ M G + D F VL++ A++ LE G VH + + +D +G+
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 365 ALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVG-IE 423
ALVDMY+KCGR+D A F +M R+ YS+ +MI G A HG+ +AL +F M G
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP 718
Query: 424 PDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALD 483
PD VTFVGVLSACSHAGL+EEG KHF MS Y L P+ EH+ CM D+ GRAG + + D
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLED 778
Query: 484 LIKSMPLVPDAFVWGALLGAC--KIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSK 541
I+ MP+ P+ +W +LGAC K EL + E L + EPE Y+L+ N+Y++
Sbjct: 779 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 838
Query: 542 NRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQS 601
RW++ +K RKKMK+ VKK G S V + + F GDKSHP IYK L E+ +
Sbjct: 839 GRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Query: 602 KNHGYI 607
++ GY+
Sbjct: 899 RDAGYV 904
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 209/425 (49%), Gaps = 16/425 (3%)
Query: 86 YNFIIQCLSNA-NPLEAIALYREMLIKGLLPNTYTL-PYVLKACWQSQ-SLRVGQQVHAY 142
+N II S A + A ++ M G P YT V AC ++ +R+ +Q+
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 143 SMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDY 202
K+ LL++++V + L+ +A G + K+F+ R+ V+ L+ V+ +
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN----QMETRNAVTLNGLMVGLVRQKW 289
Query: 203 PTEAILSFFDM-CQANLRPDGMILVIV----LSACSKLGDLSLGIKIHRYITDNHFNLSP 257
EA F DM ++ P+ ++++ S ++G L G ++H ++ +
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGL-VDF 347
Query: 258 DVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQ 317
V I N L++MY KCG+I AR+VF M K+ VSWNSMI GL G F EA++ ++ M+
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 318 GLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRID 377
+ P FTL+ L+SCA++ W +LG+ +H K I+ + + NAL+ +YA+ G ++
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 378 QAFGVFRSMKCRDVYSYTAMIVGLAIHGKAW-KALDIFSEMSQVGIEPDEVTFVGVLSAC 436
+ +F SM D S+ ++I LA ++ +A+ F + G + + +TF VLSA
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527
Query: 437 SHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFV 496
S E G K ++ N+ + ++ +G+ G + + M D
Sbjct: 528 SSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 497 WGALL 501
W +++
Sbjct: 587 WNSMI 591
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 192/423 (45%), Gaps = 26/423 (6%)
Query: 95 NANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRV--GQQVHAYSMKTALLSNV 152
N EA+ R+M+ +G+ N Y VL+AC + S+ + G+Q+H K + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 153 YVFNTLMRLYAVCGLIKAV-HKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFF 211
V N L+ +Y C I +V + L F ++ VSW ++I Y + A F
Sbjct: 140 VVSNVLISMYWKC--IGSVGYALCAFGDIE--VKNSVSWNSIISVYSQAGDQRSAFRIFS 195
Query: 212 DMCQANLRPDGMIL-VIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYL 270
M RP +V +ACS L + + + T L D+F+ + L+ +
Sbjct: 196 SMQYDGSRPTEYTFGSLVTTACS-LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 271 KCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGL-GLKPDDFTLV 329
K G++ ARKVF++M +N V+ N ++ GL + +EA +F M + + P+ + ++
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
Query: 330 CVL---NSCANIGWLELGKWVHTYLDKNHINTDGF------IGNALVDMYAKCGRIDQAF 380
S A L+ G+ VH H+ T G IGN LV+MYAKCG I A
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVH-----GHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 381 GVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAG 440
VF M +D S+ +MI GL +G +A++ + M + I P T + LS+C+
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 441 LVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGAL 500
+ G + S + ++ L+ G + E + SMP D W ++
Sbjct: 430 WAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSI 487
Query: 501 LGA 503
+GA
Sbjct: 488 IGA 490
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 14/311 (4%)
Query: 140 HAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVK 199
H+ K L +VY+ N L+ Y G + K+F + P R+ VSW ++ Y +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD--EMPL--RNCVSWACIVSGYSR 79
Query: 200 MDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLS--P 257
EA++ DM + + + V VL AC ++G S+GI R I F LS
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG--SVGILFGRQIHGLMFKLSYAV 137
Query: 258 DVFIHNALIDMYLKC-GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRM 316
D + N LI MY KC G++ A F ++ VKN VSWNS+I+ + G + A IF M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 317 QGLGLKPDDFTLVCVLNSCANIGW--LELGKWVHTYLDKNHINTDGFIGNALVDMYAKCG 374
Q G +P ++T ++ + ++ + L + + + K+ + TD F+G+ LV +AK G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 375 RIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEM-SQVGIEPDEVTFVGVL 433
+ A VF M+ R+ + ++VGL +A +F +M S + + P+ ++V +L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILL 315
Query: 434 SACSHAGLVEE 444
S+ L EE
Sbjct: 316 SSFPEYSLAEE 326
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 255 LSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFR 314
L DV++ N LI+ YL+ G+ SARKVFDEMP++N VSW +++G + G+ KEAL R
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 315 RMQGLGLKPDDFTLVCVLNSCANIGWLEL--GKWVHTYLDKNHINTDGFIGNALVDMYAK 372
M G+ + + V VL +C IG + + G+ +H + K D + N L+ MY K
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 373 C-GRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVG 431
C G + A F ++ ++ S+ ++I + G A IFS M G P E TF
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 432 -VLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLI 478
V +ACS L E D+ + + + G + DLF +GL+
Sbjct: 212 LVTTACS---LTEP------DVRLLEQIMCTIQKSGLLTDLFVGSGLV 250
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 297/510 (58%), Gaps = 9/510 (1%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
E++ + EM+ G+LP+ T +L + + ++L +Q+H Y M+ ++ ++++ + L+
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 160 RLYAVCGLIKAVHKLFHFRQHPQAQR-DLVSWTTLIQAYVKMDYPTEAILSFFDMCQANL 218
Y C + +F Q D+V +T +I Y+ +++ F + + +
Sbjct: 383 DAYFKCRGVSMAQNIFS-----QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 219 RPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSA 278
P+ + LV +L L L LG ++H +I F+ + I A+IDMY KCG + A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCN--IGCAVIDMYAKCGRMNLA 495
Query: 279 RKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANI 338
++F+ + +++VSWNSMI A+DIFR+M G+ D ++ L++CAN+
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 339 GWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMI 398
GK +H ++ K+ + +D + + L+DMYAKCG + A VF++MK +++ S+ ++I
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSII 615
Query: 399 VGLAIHGKAWKALDIFSEM-SQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYN 457
HGK +L +F EM + GI PD++TF+ ++S+C H G V+EG + F M+ Y
Sbjct: 616 AACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYG 675
Query: 458 LQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVM 517
+QPQ EHY C+VDLFGRAG + EA + +KSMP PDA VWG LLGAC++H VELAE+
Sbjct: 676 IQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVAS 735
Query: 518 ENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEF 577
L+ +P G Y+L++N +++ W+ K+R MKER+V+K PG S +E+ + F
Sbjct: 736 SKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLF 795
Query: 578 RKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
GD +HP++ IY LL+ ++ + + GYI
Sbjct: 796 VSGDVNHPESSHIYSLLNSLLGELRLEGYI 825
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 236/509 (46%), Gaps = 21/509 (4%)
Query: 5 LTVASGSRYNDINTFQQLSLLHQSPRLESSKSVGQLKQFHAFIIK---TGSPQHQTQIL- 60
L + + SR+ + ++LSLL Q+ + + Q KQ HAF+I +G +IL
Sbjct: 21 LPLRNSSRFLEETIPRRLSLLLQA--CSNPNLLRQGKQVHAFLIVNSISGDSYTDERILG 78
Query: 61 -YDKIISLSR-GNEIENLSLQNPQVYLYNFIIQCLSNANPL-EAIALYREMLIKGLLPNT 117
Y S S G L L+ + +N II L +A+A Y +ML G+ P+
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV 138
Query: 118 YTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHF 177
T P ++KAC ++ + + + N +V ++L++ Y G I KLF
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD- 197
Query: 178 RQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGD 237
Q+D V W ++ Y K I F M + P+ + VLS C+
Sbjct: 198 ---RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 238 LSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMI 297
+ LG+++H + + + I N+L+ MY KCG A K+F M + V+WN MI
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 298 AGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHIN 357
+G G +E+L F M G+ PD T +L S + LE K +H Y+ ++ I+
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 358 TDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEM 417
D F+ +AL+D Y KC + A +F DV +TAMI G +G +L++F +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 418 SQVGIEPDEVTFVGVLSACSHAGLVEEGCK-HFLDMSRVYNLQPQTEHYGC-MVDLFGRA 475
+V I P+E+T V +L ++ G + H + + ++ + GC ++D++ +
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD---NRCNIGCAVIDMYAKC 489
Query: 476 GLIREALDLIKSMPLVPDAFVWGALLGAC 504
G + A ++ + + D W +++ C
Sbjct: 490 GRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 133/254 (52%), Gaps = 15/254 (5%)
Query: 41 KQFHAFIIKTGSPQHQTQI------LYDKIISLSRGNEI-ENLSLQNPQVYLYNFIIQCL 93
++ H FIIK G ++ I +Y K ++ EI E LS ++ V + I +C
Sbjct: 461 RELHGFIIKKGF-DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD-IVSWNSMITRCA 518
Query: 94 SNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVY 153
+ NP AI ++R+M + G+ + ++ L AC S G+ +H + +K +L S+VY
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 154 VFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDM 213
+TL+ +YA CG +KA +F ++++VSW ++I A +++ F +M
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVF----KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Query: 214 CQ-ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKC 272
+ + +RPD + + ++S+C +GD+ G++ R +T++ + + P + ++D++ +
Sbjct: 635 VEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED-YGIQPQQEHYACVVDLFGRA 693
Query: 273 GNIPSARKVFDEMP 286
G + A + MP
Sbjct: 694 GRLTEAYETVKSMP 707
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 284/485 (58%), Gaps = 7/485 (1%)
Query: 123 VLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQ 182
+LK C + L G+ VHA+ +++ ++ + NTL+ +YA CG ++ K+F
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE----KM 121
Query: 183 AQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGI 242
QRD V+WTTLI Y + D P +A+L F M + P+ L V+ A + G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 243 KIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTH 302
++H + F+ +V + +AL+D+Y + G + A+ VFD + +N VSWN++IAG
Sbjct: 182 QLHGFCVKCGFD--SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 303 RGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFI 362
R ++AL++F+ M G +P F+ + +C++ G+LE GKWVH Y+ K+ F
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 363 GNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGI 422
GN L+DMYAK G I A +F + RDV S+ +++ A HG +A+ F EM +VGI
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 423 EPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREAL 482
P+E++F+ VL+ACSH+GL++EG H+ ++ + + P+ HY +VDL GRAG + AL
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGW-HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 483 DLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKN 542
I+ MP+ P A +W ALL AC++H EL E++ +P+ G ++++ NIY+S
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 543 RWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSK 602
RW +A ++RKKMKE VKK P CS VE+ + F D+ HP+ EI + +E++ + K
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Query: 603 NHGYI 607
GY+
Sbjct: 539 ELGYV 543
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 6/327 (1%)
Query: 60 LYDKIISLSRGNEIENLSLQNPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYT 119
+Y K SL ++ Q V I + P +A+ + +ML G PN +T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 120 LPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQ 179
L V+KA + G Q+H + +K SNV+V + L+ LY GL+ +F +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 180 HPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLS 239
R+ VSW LI + + +A+ F M + RP + ACS G L
Sbjct: 224 ----SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 240 LGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAG 299
G +H Y+ + L F N L+DMY K G+I ARK+FD + ++VVSWNS++
Sbjct: 280 QGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 300 LTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTD 359
G KEA+ F M+ +G++P++ + + VL +C++ G L+ G + + K+ I +
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 360 GFIGNALVDMYAKCGRIDQAFGVFRSM 386
+ +VD+ + G +++A M
Sbjct: 398 AWHYVTVVDLLGRAGDLNRALRFIEEM 424
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 317/561 (56%), Gaps = 22/561 (3%)
Query: 63 KIISLSRGNEIENLS------LQNPQVYLYNFIIQCLS-NANPLEAIALYREMLIKGLLP 115
+++ R E +NL+ + V+ +N +I L+ + + EA+ + M L P
Sbjct: 15 RLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP 74
Query: 116 NTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLF 175
+ P +KAC + G+Q H + S+++V + L+ +Y+ CG ++ K+F
Sbjct: 75 TRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVF 134
Query: 176 HFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDM-CQANLRPDGMIL-----VIVL 229
+ P+ R++VSWT++I+ Y +A+ F D+ N D M L V V+
Sbjct: 135 D--EIPK--RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 230 SACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCG--NIPSARKVFDEMPV 287
SACS++ L IH ++ F+ V + N L+D Y K G + ARK+FD++
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRG--VSVGNTLLDAYAKGGEGGVAVARKIFDQIVD 248
Query: 288 KNVVSWNSMIAGLTHRGQFKEALDIFRRM-QGLGLKPDDFTLVCVLNSCANIGWLELGKW 346
K+ VS+NS+++ G EA ++FRR+ + + + TL VL + ++ G L +GK
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 347 VHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGK 406
+H + + + D +G +++DMY KCGR++ A F MK ++V S+TAMI G +HG
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 407 AWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYG 466
A KAL++F M G+ P+ +TFV VL+ACSHAGL EG + F M + ++P EHYG
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 467 CMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPE 526
CMVDL GRAG +++A DLI+ M + PD+ +W +LL AC+IH VELAEI + L +
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488
Query: 527 GDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPK 586
G Y+L+++IY+ RWK+ ++R MK R + K PG SL+E+ GE + F GD+ HP+
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548
Query: 587 TLEIYKLLDEIMHQSKNHGYI 607
+IY+ L E+ + GY+
Sbjct: 549 REKIYEFLAELNRKLLEAGYV 569
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 345 bits (884), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 294/515 (57%), Gaps = 44/515 (8%)
Query: 114 LPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHK 173
L TL VL++C +++ +HA ++T + +V L+R+ + + +
Sbjct: 26 LSRRKTLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYD 82
Query: 174 LFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACS 233
+F + +P ++ +T +I +V + + + M ++ PD ++ VL AC
Sbjct: 83 VFSYVSNP----NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC- 137
Query: 234 KLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMP------- 286
DL + +IH + F S V + ++++Y K G + +A+K+FDEMP
Sbjct: 138 ---DLKVCREIHAQVLKLGFGSSRSVGL--KMMEIYGKSGELVNAKKMFDEMPDRDHVAA 192
Query: 287 ------------------------VKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLK 322
+K+ V W +MI GL + +AL++FR MQ +
Sbjct: 193 TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS 252
Query: 323 PDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGV 382
++FT VCVL++C+++G LELG+WVH++++ + F+GNAL++MY++CG I++A V
Sbjct: 253 ANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 383 FRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLV 442
FR M+ +DV SY MI GLA+HG + +A++ F +M G P++VT V +L+ACSH GL+
Sbjct: 313 FRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLL 372
Query: 443 EEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLG 502
+ G + F M RV+N++PQ EHYGC+VDL GR G + EA I+++P+ PD + G LL
Sbjct: 373 DIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLS 432
Query: 503 ACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKT 562
ACKIH +EL E + + L E G Y+L++N+Y+S +WKE+ ++R+ M++ ++K
Sbjct: 433 ACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 492
Query: 563 PGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEI 597
PGCS +EV + +EF GD +HP IY+ L E+
Sbjct: 493 PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 229/493 (46%), Gaps = 79/493 (16%)
Query: 31 LESSKSVGQLKQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLS-----LQNPQVYL 85
L S K++ + HA II+T Q ++++ I S + ++ + NP VYL
Sbjct: 36 LRSCKNIAHVPSIHAKIIRTFHDQ-DAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYL 94
Query: 86 YNFIIQC-LSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSM 144
Y +I +S+ + ++LY M+ +LP+ Y + VLKAC L+V +++HA +
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVL 150
Query: 145 KTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHF---RQHPQAQ----------------- 184
K S+ V +M +Y G + K+F R H A
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 185 -------RDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGD 237
+D V WT +I V+ +A+ F +M N+ + V VLSACS LG
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGA 270
Query: 238 LSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMI 297
L LG +H ++ + LS F+ NALI+MY +CG+I AR+VF M K+V+S+N+MI
Sbjct: 271 LELGRWVHSFVENQRMELSN--FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 298 AGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHIN 357
+GL G EA++ FR M G +P+ TLV +LN+C++ G L++G V + K N
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM-KRVFN 387
Query: 358 TDGFIGN--ALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFS 415
+ I + +VD+ + GR+++A+
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRF--------------------------------- 414
Query: 416 EMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRA 475
+ + IEPD + +LSAC G +E G K + N P + Y + +L+ +
Sbjct: 415 -IENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSNLYASS 471
Query: 476 GLIREALDLIKSM 488
G +E+ ++ +SM
Sbjct: 472 GKWKESTEIRESM 484
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 40/288 (13%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
+A+ L+REM ++ + N +T VL AC +L +G+ VH++ + + +V N L+
Sbjct: 238 KALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALI 297
Query: 160 RLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLR 219
+Y+ CG I ++F + +D++S+ T+I EAI F DM R
Sbjct: 298 NMYSRCGDINEARRVFRVMR----DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 220 PDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSAR 279
P+ + LV +L+ACS G L +G+++ + FN+ P + + ++D+ + G + A
Sbjct: 354 PNQVTLVALLNACSHGGLLDIGLEVFNSMK-RVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Query: 280 KVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIG 339
+ + +P+ +PD L +L++C G
Sbjct: 413 RFIENIPI----------------------------------EPDHIMLGTLLSACKIHG 438
Query: 340 WLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMK 387
+ELG+ + L ++ N D L ++YA G+ ++ + SM+
Sbjct: 439 NMELGEKIAKRLFESE-NPDSGTYVLLSNLYASSGKWKESTEIRESMR 485
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 319/574 (55%), Gaps = 14/574 (2%)
Query: 41 KQFHAFIIKTGSPQHQTQILYDKIISLSRGNEIENLS-----LQNPQVYLYNFIIQC-LS 94
K+ HA ++K+ + + + I +R ++ + N V +N +I+ +
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 95 NANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYV 154
N EA+ + +M+ G + ++ ++ A + +L G ++HAY +K SN+ V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 155 FNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMC 214
NTL+ +Y+ C L + + F R H +DL+SWTT+I Y + D EA+ F D+
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAF-LRMH---DKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 215 QANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGN 274
+ + D MIL +L A S L + + +IH +I D I N L+D+Y KC N
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVIQNELVDVYGKCRN 536
Query: 275 IPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNS 334
+ A +VF+ + K+VVSW SMI+ G EA+++FRRM GL D L+C+L++
Sbjct: 537 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 596
Query: 335 CANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSY 394
A++ L G+ +H YL + +G I A+VDMYA CG + A VF ++ + + Y
Sbjct: 597 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 395 TAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSR 454
T+MI +HG A+++F +M + PD ++F+ +L ACSHAGL++EG M
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 716
Query: 455 VYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAE 514
Y L+P EHY C+VD+ GRA + EA + +K M P A VW ALL AC+ H++ E+ E
Sbjct: 717 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 776
Query: 515 IVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEF 574
I + L+ EP+ G +L++N+++ + RW + K+R KMK ++K PGCS +E+ G+
Sbjct: 777 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 836
Query: 575 YEFRKGDKSHPKTLEIYKLLDEIMHQ-SKNHGYI 607
++F DKSHP++ EIY+ L E+ + + GY+
Sbjct: 837 HKFTARDKSHPESKEIYEKLSEVTRKLEREVGYV 870
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 209/411 (50%), Gaps = 14/411 (3%)
Query: 35 KSVGQLKQFHAFIIKTGSPQHQTQILYDKII-------SLSRGNEIENLSLQNPQVYLYN 87
++V Q +Q H+ I KT P + L K++ SL ++ + + + + +N
Sbjct: 94 RAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFD-EMPDRTAFAWN 151
Query: 88 FIIQC-LSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKT 146
+I +SN P A+ALY M ++G+ + P +LKAC + + +R G ++H+ +K
Sbjct: 152 TMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211
Query: 147 ALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEA 206
S ++ N L+ +YA + A +LF Q + D V W +++ +Y E
Sbjct: 212 GYHSTGFIVNALVSMYAKNDDLSAARRLF---DGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 207 ILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALI 266
+ F +M P+ +V L+AC LG +IH + + + S ++++ NALI
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH-SSELYVCNALI 327
Query: 267 DMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDF 326
MY +CG +P A ++ +M +VV+WNS+I G +KEAL+ F M G K D+
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 327 TLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSM 386
++ ++ + + L G +H Y+ K+ +++ +GN L+DMY+KC F M
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 387 KCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACS 437
+D+ S+T +I G A + +AL++F ++++ +E DE+ +L A S
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 173/325 (53%), Gaps = 19/325 (5%)
Query: 119 TLPYVLKACWQSQSLRVGQQVHAYSMKT-ALLSNVYVFNTLMRLYAVCGLIKAVHKLFHF 177
YVL+ C + +++ G+Q+H+ KT ++ L+ +Y CG + K+F
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVF-- 139
Query: 178 RQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVI-----VLSAC 232
R +W T+I AYV P A+ ++ N+R +G+ L + +L AC
Sbjct: 140 --DEMPDRTAFAWNTMIGAYVSNGEPASALALYW-----NMRVEGVPLGLSSFPALLKAC 192
Query: 233 SKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVK-NVV 291
+KL D+ G ++H + ++ + FI NAL+ MY K ++ +AR++FD K + V
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTG--FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 250
Query: 292 SWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYL 351
WNS+++ + G+ E L++FR M G P+ +T+V L +C + +LGK +H +
Sbjct: 251 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 310
Query: 352 DKNHI-NTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKA 410
K+ +++ ++ NAL+ MY +CG++ QA + R M DV ++ ++I G + +A
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 411 LDIFSEMSQVGIEPDEVTFVGVLSA 435
L+ FS+M G + DEV+ +++A
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 13/280 (4%)
Query: 228 VLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPV 287
VL C K +S G ++H I + D F+ L+ MY KCG++ A KVFDEMP
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 288 KNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWV 347
+ +WN+MI G+ AL ++ M+ G+ + +L +CA + + G +
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 348 HTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCR-DVYSYTAMIVGLAIHGK 406
H+ L K ++ GFI NALV MYAK + A +F + + D + +++ + GK
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 407 AWKALDIFSEMSQVGIEPDEVTFVGVLSAC---SHAGLVEEGCKHFLDMSRVYNLQPQTE 463
+ + L++F EM G P+ T V L+AC S+A L +E + S + + +E
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE-----IHASVLKSSTHSSE 319
Query: 464 HYGC--MVDLFGRAGLIREALDLIKSMPLVPDAFVWGALL 501
Y C ++ ++ R G + +A +++ M D W +L+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 293/524 (55%), Gaps = 10/524 (1%)
Query: 78 LQNPQVYLYNFIIQCLS-NANPLEAIALYREMLIKG-LLPNTYTLPYVLKACWQSQSLRV 135
L+ P + ++ ++ N +P +A+ +R M++ + P+ TL ++ AC + + R+
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 136 GQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQ 195
G+ VH + ++ +++ + N+L+ YA K LF A++D++SW+T+I
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKM----IAEKDVISWSTVIA 237
Query: 196 AYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNL 255
YV+ EA+L F DM P+ ++ VL AC+ DL G K H L
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK--GL 295
Query: 256 SPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRR 315
+V + AL+DMY+KC + A VF +P K+VVSW ++I+G T G +++ F
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 316 MQ-GLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCG 374
M +PD +V VL SC+ +G+LE K H+Y+ K +++ FIG +LV++Y++CG
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 375 RIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVG-IEPDEVTFVGVL 433
+ A VF + +D +T++I G IHGK KAL+ F+ M + ++P+EVTF+ +L
Sbjct: 416 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSIL 475
Query: 434 SACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPD 493
SACSHAGL+ EG + F M Y L P EHY +VDL GR G + A+++ K MP P
Sbjct: 476 SACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT 535
Query: 494 AFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKK 553
+ G LLGAC+IH E+AE V + L E G Y+LM+N+Y K W+ KLR
Sbjct: 536 PQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNS 595
Query: 554 MKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEI 597
+K+R +KK SL+E+ + + F D+ HP+ +Y LL E+
Sbjct: 596 VKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 14/433 (3%)
Query: 82 QVYLYNFIIQCLSNANPLEAIAL-YREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVH 140
+Y +N +++ LS E + + M P+ +TLP LKAC + + + G+ +H
Sbjct: 24 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 83
Query: 141 AYSMKTALL-SNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVK 199
+ K L S++YV ++L+ +Y CG + ++F + P D+V+W++++ + K
Sbjct: 84 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP----DIVTWSSMVSGFEK 139
Query: 200 MDYPTEAILSFFDMCQA-NLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPD 258
P +A+ F M A ++ PD + L+ ++SAC+KL + LG +H ++ F S D
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF--SND 197
Query: 259 VFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQG 318
+ + N+L++ Y K A +F + K+V+SW+++IA G EAL +F M
Sbjct: 198 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 257
Query: 319 LGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQ 378
G +P+ T++CVL +CA LE G+ H + + T+ + ALVDMY KC ++
Sbjct: 258 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 317
Query: 379 AFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEM-SQVGIEPDEVTFVGVLSACS 437
A+ VF + +DV S+ A+I G ++G A ++++ FS M + PD + V VL +CS
Sbjct: 318 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 377
Query: 438 HAGLVEEG-CKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFV 496
G +E+ C H + ++ P +V+L+ R G + A + + L D V
Sbjct: 378 ELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGIAL-KDTVV 434
Query: 497 WGALLGACKIHAK 509
W +L+ IH K
Sbjct: 435 WTSLITGYGIHGK 447
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 191/365 (52%), Gaps = 17/365 (4%)
Query: 183 AQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGI 242
+R L W TL+++ + E + F M + +PD L + L AC +L +++ G
Sbjct: 21 TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGE 80
Query: 243 KIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTH 302
IH ++ + L D+++ ++LI MY+KCG + A ++FDE+ ++V+W+SM++G
Sbjct: 81 MIHGFVKKD-VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 303 RGQFKEALDIFRRM-QGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGF 361
G +A++ FRRM + PD TL+ ++++C + LG+ VH ++ + + D
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 362 IGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVG 421
+ N+L++ YAK +A +F+ + +DV S++ +I +G A +AL +F++M G
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 422 IEPDEVTFVGVLSACSHAGLVEEGCK-HFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIRE 480
EP+ T + VL AC+ A +E+G K H L + + L+ + + +VD++ + E
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK--GLETEVKVSTALVDMYMKCFSPEE 317
Query: 481 ALDLIKSMPLVPDAFVWGALLGACKIHAKV-----ELAEIVMENLVRFEPEGDGAYILMT 535
A + +P D W AL+ ++ E + +++EN R P+ ILM
Sbjct: 318 AYAVFSRIPR-KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR--PDA----ILMV 370
Query: 536 NIYSS 540
+ S
Sbjct: 371 KVLGS 375
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 125/233 (53%), Gaps = 7/233 (3%)
Query: 278 ARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCAN 337
AR++F EM +++ WN+++ L+ Q++E L F M KPD+FTL L +C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 338 IGWLELGKWVHTYLDKN-HINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTA 396
+ + G+ +H ++ K+ + +D ++G++L+ MY KCGR+ +A +F ++ D+ ++++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 397 MIVGLAIHGKAWKALDIFSEMSQVG-IEPDEVTFVGVLSACSHAGLVEEG-CKHFLDMSR 454
M+ G +G ++A++ F M + PD VT + ++SAC+ G C H + R
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 455 VYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIH 507
++ +++ + ++ +EA++L K M D W ++ AC +
Sbjct: 193 GFS--NDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 241
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 280/524 (53%), Gaps = 39/524 (7%)
Query: 116 NTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRL---YAVCGLIKAVH 172
N Y L+ C + + L+ Q+HA +KT L+ + Y + +
Sbjct: 13 NLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQ 69
Query: 173 KLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSAC 232
+F P D W +I+ + D P ++L + M ++ + +L AC
Sbjct: 70 IVFDGFDRP----DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC 125
Query: 233 SKLGDLSLGIKIHRYITD--------------------NHFNLS---------PDVFIHN 263
S L +IH IT +F L+ PD N
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 264 ALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKP 323
++I Y+K G + A +F +M KN +SW +MI+G KEAL +F MQ ++P
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 324 DDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVF 383
D+ +L L++CA +G LE GKW+H+YL+K I D +G L+DMYAKCG +++A VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 384 RSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVE 443
+++K + V ++TA+I G A HG +A+ F EM ++GI+P+ +TF VL+ACS+ GLVE
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 444 EGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
EG F M R YNL+P EHYGC+VDL GRAGL+ EA I+ MPL P+A +WGALL A
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 504 CKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTP 563
C+IH +EL E + E L+ +P G Y+ NI++ +W +A + R+ MKE+ V K P
Sbjct: 426 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485
Query: 564 GCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
GCS + + G +EF GD+SHP+ +I + + + +GY+
Sbjct: 486 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYV 529
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 220/459 (47%), Gaps = 51/459 (11%)
Query: 5 LTVASGSRYNDINTFQQLSLLHQSPRLESSKSVGQLKQFHAFIIKTGSPQHQ---TQILY 61
+ V S S + N ++ +S L + + E +LKQ HA ++KTG Q T+ L
Sbjct: 1 MNVISCSFSLEHNLYETMSCLQRCSKQE------ELKQIHARMLKTGLMQDSYAITKFLS 54
Query: 62 DKIISLSRG----NEIENLSLQNPQVYLYNFIIQCLSNAN-PLEAIALYREMLIKGLLPN 116
I S S +I P +L+N +I+ S ++ P ++ LY+ ML N
Sbjct: 55 FCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHN 114
Query: 117 TYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFH 176
YT P +LKAC + Q+HA K ++VY N+L+ YAV G K H LF
Sbjct: 115 AYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD 174
Query: 177 FRQHPQ---------------------------AQRDLVSWTTLIQAYVKMDYPTEAILS 209
P A+++ +SWTT+I YV+ D EA+
Sbjct: 175 RIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQL 234
Query: 210 FFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMY 269
F +M +++ PD + L LSAC++LG L G IH Y+ N + D + LIDMY
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL--NKTRIRMDSVLGCVLIDMY 292
Query: 270 LKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLV 329
KCG + A +VF + K+V +W ++I+G + G +EA+ F MQ +G+KP+ T
Sbjct: 293 AKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFT 352
Query: 330 CVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGN--ALVDMYAKCGRIDQAFGVFRSMK 387
VL +C+ G +E GK + +++++ N I + +VD+ + G +D+A + M
Sbjct: 353 AVLTACSYTGLVEEGKLIFYSMERDY-NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP 411
Query: 388 CR-DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPD 425
+ + + A++ IH K +++ E+ ++ I D
Sbjct: 412 LKPNAVIWGALLKACRIH----KNIELGEEIGEILIAID 446
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 338 bits (866), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 305/532 (57%), Gaps = 49/532 (9%)
Query: 78 LQNPQVYLYNFIIQ-CLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVG 136
+Q P V++YN + + ++ ++P+ ++ LY ML + P++YT ++KA S + R G
Sbjct: 86 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--SSFASRFG 143
Query: 137 QQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQA 196
+ + A+ K +V + TL+ Y+ G I+ K+F +RD ++WTT++ A
Sbjct: 144 ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD----EMPERDDIAWTTMVSA 199
Query: 197 YVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLS 256
Y ++ DM AN + M S+ + +
Sbjct: 200 YRRV----------LDMDSANSLANQM---------SEKNEAT----------------- 223
Query: 257 PDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRM 316
N LI+ Y+ GN+ A +F++MPVK+++SW +MI G + +++EA+ +F +M
Sbjct: 224 -----SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM 278
Query: 317 QGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRI 376
G+ PD+ T+ V+++CA++G LE+GK VH Y +N D +IG+ALVDMY+KCG +
Sbjct: 279 MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 338
Query: 377 DQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSAC 436
++A VF ++ ++++ + ++I GLA HG A +AL +F++M ++P+ VTFV V +AC
Sbjct: 339 ERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC 398
Query: 437 SHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFV 496
+HAGLV+EG + + M Y++ EHYG MV LF +AGLI EAL+LI +M P+A +
Sbjct: 399 THAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI 458
Query: 497 WGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKE 556
WGALL C+IH + +AEI L+ EP G Y L+ ++Y+ +NRW++ ++R +M+E
Sbjct: 459 WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRE 518
Query: 557 RKVKKT-PGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
++K PG S + + + F DKSH + E+ LLDEI Q GY+
Sbjct: 519 LGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYV 570
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 34/236 (14%)
Query: 353 KNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALD 412
K +N D + N + R+D A M+ +V+ Y A+ G ++L+
Sbjct: 53 KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 112
Query: 413 IFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCK-HFLDMSRVYNLQPQTEHYGCMVDL 471
++ M + + P T+ ++ A S A E + H ++++ QT ++D
Sbjct: 113 LYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT----TLIDF 168
Query: 472 FGRAGLIREALDLIKSMPLVPDAFVWGALLGA--------------------------CK 505
+ G IREA + MP D W ++ A C
Sbjct: 169 YSATGRIREARKVFDEMP-ERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCL 227
Query: 506 IHAKVELAEIVM-ENLVRFEPEGD-GAYILMTNIYSSKNRWKEALKLRKKMKERKV 559
I+ + L + E+L P D ++ M YS R++EA+ + KM E +
Sbjct: 228 INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 283
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 288/496 (58%), Gaps = 9/496 (1%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
E + L+ M + P+ TL V+ AC R+G+ +HAY + T ++ V N+L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 160 RLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLR 219
++Y G + KLF + ++D+VSWTT+I Y P +AI ++ M Q +++
Sbjct: 340 QMYLNAGSWREAEKLFSRME----RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 220 PDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSAR 279
PD + + VLSAC+ LGDL G+++H+ L V + N LI+MY KC I A
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKAR--LISYVIVANNLINMYSKCKCIDKAL 453
Query: 280 KVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIG 339
+F +P KNV+SW S+IAGL + EAL IF R + L+P+ TL L +CA IG
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIG 512
Query: 340 WLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIV 399
L GK +H ++ + + D F+ NAL+DMY +CGR++ A+ F S K +DV S+ ++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLT 571
Query: 400 GLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQ 459
G + G+ +++F M + + PDE+TF+ +L CS + +V +G +F M Y +
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVT 630
Query: 460 PQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMEN 519
P +HY C+VDL GRAG ++EA I+ MP+ PD VWGALL AC+IH K++L E+ ++
Sbjct: 631 PNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH 690
Query: 520 LVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRK 579
+ + + G YIL+ N+Y+ +W+E K+R+ MKE + GCS VEV G+ + F
Sbjct: 691 IFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLS 750
Query: 580 GDKSHPKTLEIYKLLD 595
DK HP+T EI +L+
Sbjct: 751 DDKYHPQTKEINTVLE 766
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 183/327 (55%), Gaps = 8/327 (2%)
Query: 100 EAIALYREML-IKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTL 158
EA+ LY ML + G+ P+ YT P VL+ C L G++VH + ++ ++ V N L
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237
Query: 159 MRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANL 218
+ +Y CG +K+ LF +RD++SW +I Y + E + FF M ++
Sbjct: 238 ITMYVKCGDVKSARLLF----DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 219 RPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSA 278
PD M L V+SAC LGD LG IH Y+ F + D+ + N+L MYL G+ A
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF--AVDISVCNSLTQMYLNAGSWREA 351
Query: 279 RKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANI 338
K+F M K++VSW +MI+G + +A+D +R M +KPD+ T+ VL++CA +
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 339 GWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMI 398
G L+ G +H K + + + N L++MY+KC ID+A +F ++ ++V S+T++I
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 399 VGLAIHGKAWKALDIFSEMSQVGIEPD 425
GL ++ + ++AL IF ++ ++P+
Sbjct: 472 AGLRLNNRCFEAL-IFLRQMKMTLQPN 497
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 217/430 (50%), Gaps = 13/430 (3%)
Query: 94 SNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVY 153
+N EA+ L M + + +++ C ++ G +V++ ++ + V
Sbjct: 71 ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE 130
Query: 154 VFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDM 213
+ N + ++ G + +F ++R+L SW L+ Y K Y EA+ + M
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFG----KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 214 CQ-ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKC 272
++PD VL C + DL+ G ++H ++ + L DV NALI MY+KC
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVKC 244
Query: 273 GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVL 332
G++ SAR +FD MP ++++SWN+MI+G G E L++F M+GL + PD TL V+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 333 NSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVY 392
++C +G LG+ +H Y+ D + N+L MY G +A +F M+ +D+
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 393 SYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCK-HFLD 451
S+T MI G + KA+D + M Q ++PDE+T VLSAC+ G ++ G + H L
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 452 M-SRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKV 510
+ +R+ + + +++++ + I +ALD+ ++P + W +++ +++ +
Sbjct: 425 IKARLISYVIVANN---LINMYSKCKCIDKALDIFHNIPR-KNVISWTSIIAGLRLNNRC 480
Query: 511 ELAEIVMENL 520
A I + +
Sbjct: 481 FEALIFLRQM 490
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 161/324 (49%), Gaps = 17/324 (5%)
Query: 84 YLYNFIIQCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYS 143
Y YNF+ P +AI YR M + P+ T+ VL AC L G ++H +
Sbjct: 373 YEYNFL--------PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 144 MKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYP 203
+K L+S V V N L+ +Y+ C I +F H +++++SWT++I A ++++
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIF----HNIPRKNVISWTSII-AGLRLNNR 479
Query: 204 TEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHN 263
L F + L+P+ + L L+AC+++G L G +IH ++ L D F+ N
Sbjct: 480 CFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGL--DDFLPN 537
Query: 264 ALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKP 323
AL+DMY++CG + +A F+ K+V SWN ++ G + RGQ +++F RM ++P
Sbjct: 538 ALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 324 DDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVF 383
D+ T + +L C+ + G + ++ + + +VD+ + G + +A
Sbjct: 597 DEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFI 656
Query: 384 RSMKCR-DVYSYTAMIVGLAIHGK 406
+ M D + A++ IH K
Sbjct: 657 QKMPVTPDPAVWGALLNACRIHHK 680
Score = 32.7 bits (73), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 400 GLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHF-LDMSRVYNL 458
GL +GK +A+ + + M ++ + DE FV ++ C EEG K + + +S + +L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 459 QPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGA 503
E + +F R G + +A + M + F W L+G
Sbjct: 128 --GVELGNAFLAMFVRFGNLVDAWYVFGKMS-ERNLFSWNVLVGG 169
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 285/479 (59%), Gaps = 14/479 (2%)
Query: 137 QQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVH---KLFHFRQHPQAQRDLVSWTTL 193
+Q+HA ++T+L+ N VF+ + A+ + + ++ ++F R +P L T+
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPT----LSHCNTM 83
Query: 194 IQAYVKMDYPTEAILSFFDMCQ-ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNH 252
I+A+ P E F + + ++L + + L C K GDL G++IH I +
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 253 FNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDI 312
F D + L+D+Y C N A KVFDE+P ++ VSWN + + + ++ L +
Sbjct: 144 F--LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 313 FRRMQGL---GLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDM 369
F +M+ +KPD T + L +CAN+G L+ GK VH ++D+N ++ + N LV M
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSM 261
Query: 370 YAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTF 429
Y++CG +D+A+ VF M+ R+V S+TA+I GLA++G +A++ F+EM + GI P+E T
Sbjct: 262 YSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL 321
Query: 430 VGVLSACSHAGLVEEGCKHFLDM-SRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSM 488
G+LSACSH+GLV EG F M S + ++P HYGC+VDL GRA L+ +A LIKSM
Sbjct: 322 TGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM 381
Query: 489 PLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEAL 548
+ PD+ +W LLGAC++H VEL E V+ +L+ + E G Y+L+ N YS+ +W++
Sbjct: 382 EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVT 441
Query: 549 KLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIMHQSKNHGYI 607
+LR MKE+++ PGCS +E+ G +EF D SHP+ EIYK+L EI Q K GY+
Sbjct: 442 ELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 175/353 (49%), Gaps = 16/353 (4%)
Query: 80 NPQVYLYNFIIQCLS-NANPLEAIALYREMLIKGLLP-NTYTLPYVLKACWQSQSLRVGQ 137
NP + N +I+ S + P E L+R + LP N + + LK C +S L G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 138 QVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAY 197
Q+H LS+ + TLM LY+ C K+F + P +RD VSW L Y
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFD--EIP--KRDTVSWNVLFSCY 189
Query: 198 VKMDYPTEAILSFFDMCQAN----LRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHF 253
++ + T +L FD + + ++PDG+ ++ L AC+ LG L G ++H +I +N
Sbjct: 190 LR-NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN-- 246
Query: 254 NLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIF 313
LS + + N L+ MY +CG++ A +VF M +NVVSW ++I+GL G KEA++ F
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 314 RRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGN--ALVDMYA 371
M G+ P++ TL +L++C++ G + G + + + +VD+
Sbjct: 307 NEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 372 KCGRIDQAFGVFRSMKCR-DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIE 423
+ +D+A+ + +SM+ + D + ++ +HG + S + ++ E
Sbjct: 367 RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 130/279 (46%), Gaps = 12/279 (4%)
Query: 86 YNFIIQC-LSNANPLEAIALYREML--IKGLL-PNTYTLPYVLKACWQSQSLRVGQQVHA 141
+N + C L N + + L+ +M + G + P+ T L+AC +L G+QVH
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 142 YSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMD 201
+ + L + + NTL+ +Y+ CG + +++F + +R++VSWT LI
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVF----YGMRERNVVSWTALISGLAMNG 297
Query: 202 YPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFI 261
+ EAI +F +M + + P+ L +LSACS G ++ G+ + F + P++
Sbjct: 298 FGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHH 357
Query: 262 HNALIDMYLKCGNIPSARKVFDEMPVK-NVVSWNSMIAGLTHRGQFKEALDIFRRMQGL- 319
+ ++D+ + + A + M +K + W +++ G + + + L
Sbjct: 358 YGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELK 417
Query: 320 GLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINT 358
+ D+ L +LN+ + +G E + + + + I+T
Sbjct: 418 AEEAGDYVL--LLNTYSTVGKWEKVTELRSLMKEKRIHT 454
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 313/589 (53%), Gaps = 21/589 (3%)
Query: 20 QQLSLLHQS----PRLESSKSVGQLK----QFHAFIIKTGSPQHQTQILYDKIISLSRGN 71
+ +LH++ R++ +S+ +LK Q HAF+I TG+ + + I D I S R
Sbjct: 5 KHFCMLHRTLLCPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIG 64
Query: 72 EI---ENLSLQNPQ--VYLYNFIIQCLSNA-NPLEAIALYREMLIKGLLPNTYTLPYVLK 125
EI + + PQ V +YN +I S NP E + LY +M+ + + P++ T +K
Sbjct: 65 EISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIK 124
Query: 126 ACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQR 185
AC L G+ V ++ ++V+V ++++ LY CG + LF A+R
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG----KMAKR 180
Query: 186 DLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIH 245
D++ WTT++ + + +A+ + +M D ++++ +L A LGD +G +H
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 246 RYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQ 305
Y+ L +V + +L+DMY K G I A +VF M K VSW S+I+G G
Sbjct: 241 GYLYRT--GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 306 FKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNA 365
+A + MQ LG +PD TLV VL +C+ +G L+ G+ VH Y+ K H+ D A
Sbjct: 299 ANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATA 357
Query: 366 LVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPD 425
L+DMY+KCG + + +F + +D+ + MI IHG + + +F +M++ IEPD
Sbjct: 358 LMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD 417
Query: 426 EVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLI 485
TF +LSA SH+GLVE+G F M Y +QP +HY C++DL RAG + EALD+I
Sbjct: 418 HATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMI 477
Query: 486 KSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWK 545
S L +W ALL C H + + +I +++ P+ G L++N +++ N+WK
Sbjct: 478 NSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWK 537
Query: 546 EALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLL 594
E K+RK M+ ++K PG S +EV GE F D SH + + ++L
Sbjct: 538 EVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVL 586
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/606 (33%), Positives = 322/606 (53%), Gaps = 46/606 (7%)
Query: 31 LESSKSVGQLK---QFHAFIIKT-----GSPQHQTQILYDKIISLSRG----NEIENLSL 78
L S ++ +L+ Q HA +K+ G + T +Y K ++ + ENL+
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 79 QNPQVYLYNFIIQCLSNA-NPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQ 137
Q+ YN +I S + +A+ L+ ++ GL + +L V +AC + L G
Sbjct: 348 QS-----YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 138 QVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAY 197
Q++ ++K++L +V V N + +Y C + ++F +RD VSW +I A+
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD----EMRRRDAVSWNAIIAAH 458
Query: 198 VKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSP 257
+ E + F M ++ + PD +L AC+ G L G++IH I + ++
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS--GMAS 515
Query: 258 DVFIHNALIDMYLKCGNIPSARKV----------------FDEMPVKNV----VSWNSMI 297
+ + +LIDMY KCG I A K+ ++M K + VSWNS+I
Sbjct: 516 NSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSII 575
Query: 298 AGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHIN 357
+G + Q ++A +F RM +G+ PD FT VL++CAN+ LGK +H + K +
Sbjct: 576 SGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQ 635
Query: 358 TDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEM 417
+D +I + LVDMY+KCG + + +F RD ++ AMI G A HGK +A+ +F M
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Query: 418 SQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGL 477
I+P+ VTF+ +L AC+H GL+++G ++F M R Y L PQ HY MVD+ G++G
Sbjct: 696 ILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGK 755
Query: 478 IREALDLIKSMPLVPDAFVWGALLGACKIHA-KVELAEIVMENLVRFEPEGDGAYILMTN 536
++ AL+LI+ MP D +W LLG C IH VE+AE L+R +P+ AY L++N
Sbjct: 756 VKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSN 815
Query: 537 IYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDE 596
+Y+ W++ LR+ M+ K+KK PGCS VE+ E + F GDK+HP+ EIY+ L
Sbjct: 816 VYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGL 875
Query: 597 IMHQSK 602
I + K
Sbjct: 876 IYSEMK 881
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 197/390 (50%), Gaps = 10/390 (2%)
Query: 93 LSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNV 152
L N L++I ++ +M +G+ + T +LK C + +G Q+H ++ ++V
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 153 YVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFD 212
+ L+ +YA + V L F+ P +++ VSW+ +I V+ + + A+ F +
Sbjct: 216 VAASALLDMYAKGK--RFVESLRVFQGIP--EKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 213 MCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKC 272
M + N I VL +C+ L +L LG ++H + + F + D + A +DMY KC
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKC 329
Query: 273 GNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVL 332
N+ A+ +FD N S+N+MI G + +AL +F R+ GL D+ +L V
Sbjct: 330 DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 389
Query: 333 NSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVY 392
+CA + L G ++ K+ ++ D + NA +DMY KC + +AF VF M+ RD
Sbjct: 390 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 393 SYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDM 452
S+ A+I +GK ++ L +F M + IEPDE TF +L AC+ L G +
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL---GYGMEIHS 506
Query: 453 SRVYNLQPQTEHYGC-MVDLFGRAGLIREA 481
S V + GC ++D++ + G+I EA
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 218/502 (43%), Gaps = 37/502 (7%)
Query: 116 NTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLF 175
+T +V K C + +L +G+Q HA+ + + +V N L+++Y + +F
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 106
Query: 176 H-----------------------------FRQHPQAQRDLVSWTTLIQAYVKMDYPTEA 206
F P RD+VSW +++ Y++ ++
Sbjct: 107 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV--RDVVSWNSMLSGYLQNGESLKS 164
Query: 207 ILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALI 266
I F DM + + DG I+L CS L D SLG++IH + DV +AL+
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV--RVGCDTDVVAASALL 222
Query: 267 DMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDF 326
DMY K + +VF +P KN VSW+++IAG AL F+ MQ +
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 327 TLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSM 386
VL SCA + L LG +H + K+ DG + A +DMYAKC + A +F +
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 387 KCRDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGC 446
+ + SY AMI G + +KAL +F + G+ DE++ GV AC+ + EG
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 447 KHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKI 506
+ + ++ +L +D++G+ + EA + M DA W A++ A +
Sbjct: 403 QIY-GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQ 460
Query: 507 HAKVELAEIVMENLVRFEPEGDGAYILMTNIYSSKNRWKEALKLRKKMKERKV--KKTPG 564
+ K + +++R E D + +++ + + + + G
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 565 CSLVEVYGEFYEFRKGDKSHPK 586
CSL+++Y + + +K H +
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSR 542
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 307/553 (55%), Gaps = 23/553 (4%)
Query: 55 HQTQILYDKIISLSRGNEIENLSLQNPQVYLYNFIIQCLSNANPLEAIALYREMLIKGLL 114
+ +IL+DK E++++ N + Y +N LEA+ ++ M + +
Sbjct: 246 RKARILFDK-------TEVKSVVTWNSMISGY------AANGLDLEALGMFYSMRLNYVR 292
Query: 115 PNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKL 174
+ + V+K C + LR +Q+H +K L + + LM Y+ C + +L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 175 FHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSK 234
F + ++VSWT +I +++ D EA+ F +M + +RP+ ++L+A
Sbjct: 353 F---KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 235 LGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWN 294
+ ++H + ++ S V AL+D Y+K G + A KVF + K++V+W+
Sbjct: 410 ISP----SEVHAQVVKTNYERSSTV--GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 295 SMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANI-GWLELGKWVHTYLDK 353
+M+AG G+ + A+ +F + G+KP++FT +LN CA + GK H + K
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 354 NHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDI 413
+ +++ + +AL+ MYAK G I+ A VF+ + +D+ S+ +MI G A HG+A KALD+
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 414 FSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFG 473
F EM + ++ D VTF+GV +AC+HAGLVEEG K+F M R + P EH CMVDL+
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 474 RAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVMENLVRFEPEGDGAYIL 533
RAG + +A+ +I++MP + +W +L AC++H K EL + E ++ +PE AY+L
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 534 MTNIYSSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKL 593
++N+Y+ W+E K+RK M ER VKK PG S +EV + Y F GD+SHP +IY
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 594 LDEIMHQSKNHGY 606
L+++ + K+ GY
Sbjct: 764 LEDLSTRLKDLGY 776
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 199/431 (46%), Gaps = 12/431 (2%)
Query: 100 EAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTALLSNVYVFNTLM 159
E + L+ M +G PN++T L + G QVH +K L + V N+L+
Sbjct: 177 EVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLI 236
Query: 160 RLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILSFFDMCQANLR 219
LY CG ++ LF + +V+W ++I Y EA+ F+ M +R
Sbjct: 237 NLYLKCGNVRKARILF----DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 220 PDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMYLKCGNIPSAR 279
V+ C+ L +L ++H + F D I AL+ Y KC + A
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF--DQNIRTALMVAYSKCTAMLDAL 350
Query: 280 KVFDEMP-VKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLVCVLNSCANI 338
++F E+ V NVVSW +MI+G +EA+D+F M+ G++P++FT +L + I
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 339 GWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCRDVYSYTAMI 398
E VH + K + +G AL+D Y K G++++A VF + +D+ +++AM+
Sbjct: 411 SPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 399 VGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRVYNL 458
G A G+ A+ +F E+++ GI+P+E TF +L+ C+ K F + L
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 459 QPQTEHYGCMVDLFGRAGLIREALDLIKSMPLVPDAFVWGALLGACKIHAKVELAEIVME 518
++ ++ + G I A ++ K D W +++ H + A V +
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 519 NLVRFEPEGDG 529
+ + + + DG
Sbjct: 586 EMKKRKVKMDG 596
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 183/386 (47%), Gaps = 27/386 (6%)
Query: 136 GQQVHAYSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQ 195
G+Q+H +K L +V V +L+ Y K K+F +R++V+WTTLI
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF----DEMKERNVVTWTTLIS 167
Query: 196 AYVKMDYPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNL 255
Y + E + F M +P+ L ++ G G+++H + N L
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN--GL 225
Query: 256 SPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRR 315
+ + N+LI++YLKCGN+ AR +FD+ VK+VV+WNSMI+G G EAL +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 316 MQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGR 375
M+ ++ + + V+ CAN+ L + +H + K D I AL+ Y+KC
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 376 IDQAFGVFRSMKC-RDVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLS 434
+ A +F+ + C +V S+TAMI G + +A+D+FSEM + G+ P+E T+ +L+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 435 ACS-------HAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIKS 487
A HA +V+ N + + ++D + + G + EA +
Sbjct: 406 ALPVISPSEVHAQVVKT------------NYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 488 MPLVPDAFVWGALLGACKIHAKVELA 513
+ D W A+L + E A
Sbjct: 454 ID-DKDIVAWSAMLAGYAQTGETEAA 478
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 192/451 (42%), Gaps = 66/451 (14%)
Query: 152 VYVFNTLM--RLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMDYPTEAILS 209
+Y F T+ RLY H LF RD S+ +L+ + + EA
Sbjct: 32 IYCFGTVSSSRLYNA-------HNLFD----KSPGRDRESYISLLFGFSRDGRTQEAKRL 80
Query: 210 FFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDNHFNLSPDVFIHNALIDMY 269
F ++ + + D I VL + L D G ++H F DV + +L+D Y
Sbjct: 81 FLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI--KFGFLDDVSVGTSLVDTY 138
Query: 270 LKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRMQGLGLKPDDFTLV 329
+K N RKVFDEM +NVV+W ++I+G E L +F RMQ G +P+ FT
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 330 CVLNSCANIGWLELGKWVHTYLDKNHINTDGFIGNALVDMYAKCGRIDQAFGVFRSMKCR 389
L A G G VHT + KN ++ + N+L+++Y KCG + +A +F + +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
Query: 390 DVYSYTAMIVGLAIHGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACS-----------H 438
V ++ +MI G A +G +AL +F M + E +F V+ C+ H
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 439 AGLVEEG-----------------CKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLI--- 478
+V+ G C LD R++ + GC+ ++ +I
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF------KEIGCVGNVVSWTAMISGF 372
Query: 479 ------REALDLIKSMP---LVPDAFVWGALLGACKIHAKVEL-AEIVMENLVRFEPEGD 528
EA+DL M + P+ F + +L A + + E+ A++V N R G
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT 432
Query: 529 GAYILMTNIYSSKNRWKEALKLRKKMKERKV 559
+ + Y + +EA K+ + ++ +
Sbjct: 433 A----LLDAYVKLGKVEEAAKVFSGIDDKDI 459
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 9/170 (5%)
Query: 33 SSKSVGQLKQFHAFIIKTG-----SPQHQTQILYDKIISLSRGNEIENLSLQNPQVYLYN 87
++ S+GQ KQFH F IK+ +Y K ++ E+ + V +
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 88 FIIQCLSNANPLEAIALYREMLIKGLLPNTYTLPYVLKACWQSQSLRVGQQVHAYSMKTA 147
I + ++A+ +++EM + + + T V AC + + G++ ++
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 148 LLSNVYVFNTLM-RLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQA 196
++ N+ M LY+ G ++ K+ +P W T++ A
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS---TIWRTILAA 673
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 290/489 (59%), Gaps = 25/489 (5%)
Query: 137 QQVHAYSMKTALL---SNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTL 193
+Q+HA++++T + ++++ +++L + + ++F ++ + W TL
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSS----FMWNTL 120
Query: 194 IQAYV-KMDYPTEAILSFFDMCQ-ANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDN 251
I+A + EA + + M + PD VL AC+ + S G ++H I +
Sbjct: 121 IRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 252 HFNLSPDVFIHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALD 311
F DV+++N LI +Y CG + ARKVFDEMP +++VSWNSMI L G++ AL
Sbjct: 181 GFG--GDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQ 238
Query: 312 IFRRMQGLGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKN---HINTDGFIGNALVD 368
+FR MQ +PD +T+ VL++CA +G L LG W H +L + + D + N+L++
Sbjct: 239 LFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 369 MYAKCGRIDQAFGVFRSMKCRDVYSYTAMIVGLAIHGKAWKALDIFSEM--SQVGIEPDE 426
MY KCG + A VF+ M+ RD+ S+ AMI+G A HG+A +A++ F M + + P+
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 427 VTFVGVLSACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIREALDLIK 486
VTFVG+L AC+H G V +G ++F M R Y ++P EHYGC+VDL RAG I EA+D++
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 487 SMPLVPDAFVWGALLGA-CKIHAKVELAEIVMENLVRFEPEGD-------GAYILMTNIY 538
SMP+ PDA +W +LL A CK A VEL+E + N++ + + + GAY+L++ +Y
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 477
Query: 539 SSKNRWKEALKLRKKMKERKVKKTPGCSLVEVYGEFYEFRKGDKSHPKTLEIYKLLDEIM 598
+S +RW + +RK M E ++K PGCS +E+ G +EF GD SHP+T +IY+ L I
Sbjct: 478 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 537
Query: 599 HQSKNHGYI 607
+ ++ GY+
Sbjct: 538 DRLRSIGYL 546
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 235/466 (50%), Gaps = 37/466 (7%)
Query: 32 ESSKSVGQLKQFHAFIIKTGSPQH-QTQILYDKIISLSRGNEIENL------SLQNPQVY 84
E+ + QLKQ HAF ++T P+ T LY KI+ LS N S++N +
Sbjct: 56 ETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSF 115
Query: 85 LYNFIIQCLSN--ANPLEAIALYREMLIKG-LLPNTYTLPYVLKACWQSQSLRVGQQVHA 141
++N +I+ ++ + EA LYR+ML +G P+ +T P+VLKAC G+QVH
Sbjct: 116 MWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 142 YSMKTALLSNVYVFNTLMRLYAVCGLIKAVHKLFHFRQHPQAQRDLVSWTTLIQAYVKMD 201
+K +VYV N L+ LY CG + K+F +R LVSW ++I A V+
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF----DEMPERSLVSWNSMIDALVRFG 231
Query: 202 YPTEAILSFFDMCQANLRPDGMILVIVLSACSKLGDLSLGIKIHRYITDN-HFNLSPDVF 260
A+ F +M Q + PDG + VLSAC+ LG LSLG H ++ +++ DV
Sbjct: 232 EYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 261 IHNALIDMYLKCGNIPSARKVFDEMPVKNVVSWNSMIAGLTHRGQFKEALDIFRRM--QG 318
+ N+LI+MY KCG++ A +VF M +++ SWN+MI G G+ +EA++ F RM +
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 319 LGLKPDDFTLVCVLNSCANIGWLELGKWVHTYLDKNHINTDGFIG-NALVDMYAKCGRID 377
++P+ T V +L +C + G++ G+ + +++ +VD+ A+ G I
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 410
Query: 378 QAFGVFRSMKCR-DVYSYTAMIVGLAIHGKAWKALDIFSEMSQ--VGIEPDEVTFVGVLS 434
+A + SM + D + +++ G ++++ E+++ +G + D + G
Sbjct: 411 EAIDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEEIARNIIGTKEDNESSNG--- 464
Query: 435 ACSHAGLVEEGCKHFLDMSRVYNLQPQTEHYGCMVDLFGRAGLIRE 480
CS A ++ +SRVY + G + L G+ +E
Sbjct: 465 NCSGA---------YVLLSRVYASASRWNDVGIVRKLMSEHGIRKE 501
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 225,950,441
Number of Sequences: 539616
Number of extensions: 9466745
Number of successful extensions: 27913
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 19408
Number of HSP's gapped (non-prelim): 2057
length of query: 608
length of database: 191,569,459
effective HSP length: 123
effective length of query: 485
effective length of database: 125,196,691
effective search space: 60720395135
effective search space used: 60720395135
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)