Query 047148
Match_columns 84
No_of_seqs 106 out of 1772
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:05:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047148.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047148hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ghd_A A cystathionine beta-sy 99.3 2.7E-11 9.1E-16 66.5 7.0 62 7-69 2-63 (70)
2 4esy_A CBS domain containing m 99.2 2.5E-11 8.4E-16 75.3 5.7 52 1-52 22-73 (170)
3 3fio_A A cystathionine beta-sy 99.1 2.6E-10 8.8E-15 61.1 7.0 48 7-55 2-49 (70)
4 3kxr_A Magnesium transporter, 99.1 4.5E-10 1.5E-14 72.2 7.6 57 1-57 120-176 (205)
5 2ef7_A Hypothetical protein ST 99.1 2.9E-10 1E-14 67.3 6.2 59 1-59 71-129 (133)
6 4esy_A CBS domain containing m 99.1 1.5E-10 5E-15 71.7 4.8 51 2-53 110-160 (170)
7 3sl7_A CBS domain-containing p 99.1 2.8E-10 9.5E-15 70.3 5.8 57 2-58 103-159 (180)
8 3lv9_A Putative transporter; C 99.1 5.6E-10 1.9E-14 67.4 6.9 54 1-55 92-145 (148)
9 3l2b_A Probable manganase-depe 99.1 5E-10 1.7E-14 72.9 7.2 55 1-55 11-65 (245)
10 3lv9_A Putative transporter; C 99.1 8.2E-10 2.8E-14 66.7 7.5 54 1-54 27-83 (148)
11 3kpb_A Uncharacterized protein 99.0 5.2E-10 1.8E-14 65.2 6.3 53 1-53 66-118 (122)
12 3jtf_A Magnesium and cobalt ef 99.0 8.3E-10 2.8E-14 65.5 7.3 53 2-55 74-126 (129)
13 3oco_A Hemolysin-like protein 99.0 6.1E-10 2.1E-14 67.8 6.7 56 1-57 90-145 (153)
14 3lqn_A CBS domain protein; csg 99.0 9.1E-10 3.1E-14 66.4 7.1 58 1-60 91-148 (150)
15 3lhh_A CBS domain protein; str 99.0 7.3E-10 2.5E-14 68.8 6.8 55 1-56 111-165 (172)
16 3hf7_A Uncharacterized CBS-dom 99.0 4.7E-10 1.6E-14 66.8 5.6 53 2-55 75-127 (130)
17 4gqw_A CBS domain-containing p 99.0 4.6E-10 1.6E-14 67.4 5.5 55 2-56 90-144 (152)
18 3nqr_A Magnesium and cobalt ef 99.0 8E-10 2.8E-14 65.3 6.4 51 2-53 74-124 (127)
19 3lfr_A Putative metal ION tran 99.0 4.9E-10 1.7E-14 67.1 5.3 54 1-55 74-127 (136)
20 3k6e_A CBS domain protein; str 99.0 6.6E-10 2.3E-14 68.5 5.9 55 1-57 90-144 (156)
21 3gby_A Uncharacterized protein 99.0 4.1E-10 1.4E-14 66.5 4.8 54 1-54 72-125 (128)
22 1pvm_A Conserved hypothetical 99.0 1.5E-09 5E-14 68.0 7.3 54 1-54 13-66 (184)
23 2d4z_A Chloride channel protei 99.0 2.5E-09 8.6E-14 71.0 8.3 56 1-56 17-74 (250)
24 3kpb_A Uncharacterized protein 99.0 8E-10 2.8E-14 64.4 5.1 54 1-54 5-58 (122)
25 3k2v_A Putative D-arabinose 5- 99.0 1.6E-09 5.4E-14 65.6 6.6 53 1-53 32-86 (149)
26 3i8n_A Uncharacterized protein 99.0 8E-10 2.8E-14 65.5 5.1 52 2-54 77-128 (130)
27 1o50_A CBS domain-containing p 99.0 7.9E-10 2.7E-14 67.4 5.1 53 2-55 101-153 (157)
28 3fhm_A Uncharacterized protein 99.0 1.1E-09 3.6E-14 67.4 5.7 54 2-55 29-85 (165)
29 1vr9_A CBS domain protein/ACT 99.0 2.5E-09 8.5E-14 68.7 7.6 55 1-55 76-130 (213)
30 2p9m_A Hypothetical protein MJ 99.0 1.4E-09 4.7E-14 64.6 5.9 53 2-54 78-135 (138)
31 2rc3_A CBS domain; in SITU pro 99.0 1.7E-09 5.9E-14 64.2 6.2 53 1-54 78-130 (135)
32 2yzi_A Hypothetical protein PH 99.0 2E-09 6.8E-14 64.0 6.3 51 1-51 11-61 (138)
33 3l2b_A Probable manganase-depe 98.9 4.8E-10 1.6E-14 73.0 3.8 53 1-53 189-242 (245)
34 2rih_A Conserved protein with 98.9 1.9E-09 6.4E-14 64.5 6.0 52 1-53 75-126 (141)
35 2o16_A Acetoin utilization pro 98.9 1.4E-09 4.8E-14 66.7 5.5 54 1-54 9-62 (160)
36 3gby_A Uncharacterized protein 98.9 2.2E-09 7.6E-14 63.3 5.8 52 1-53 9-60 (128)
37 2p9m_A Hypothetical protein MJ 98.9 3.3E-09 1.1E-13 62.9 6.6 52 1-52 12-64 (138)
38 2rih_A Conserved protein with 98.9 3E-09 1E-13 63.6 6.3 54 1-54 9-64 (141)
39 1y5h_A Hypothetical protein RV 98.9 6.2E-10 2.1E-14 65.9 3.1 51 1-51 12-62 (133)
40 3k6e_A CBS domain protein; str 98.9 4.7E-09 1.6E-13 64.7 7.2 53 2-54 20-74 (156)
41 2nyc_A Nuclear protein SNF4; b 98.9 2.7E-09 9.3E-14 63.5 6.0 53 2-54 16-68 (144)
42 3i8n_A Uncharacterized protein 98.9 3.2E-09 1.1E-13 62.9 6.1 54 1-54 10-66 (130)
43 3fv6_A YQZB protein; CBS domai 98.9 2.1E-09 7.2E-14 65.7 5.4 59 1-59 85-148 (159)
44 2yzq_A Putative uncharacterize 98.9 1.7E-09 5.9E-14 70.8 5.3 53 1-53 225-277 (282)
45 2o16_A Acetoin utilization pro 98.9 3E-09 1E-13 65.2 6.0 54 2-56 83-136 (160)
46 3ctu_A CBS domain protein; str 98.9 2.9E-09 9.8E-14 64.7 5.8 54 1-54 19-74 (156)
47 2emq_A Hypothetical conserved 98.9 3.4E-09 1.2E-13 64.2 6.1 53 1-53 15-69 (157)
48 3oi8_A Uncharacterized protein 98.9 2.5E-09 8.4E-14 65.4 5.5 48 2-50 108-155 (156)
49 1pbj_A Hypothetical protein; s 98.9 3.9E-09 1.3E-13 61.6 6.1 52 1-53 5-56 (125)
50 3lhh_A CBS domain protein; str 98.9 5.2E-09 1.8E-13 64.9 7.0 54 1-54 46-102 (172)
51 2pfi_A Chloride channel protei 98.9 4.7E-09 1.6E-13 63.8 6.5 53 1-53 17-71 (164)
52 3fhm_A Uncharacterized protein 98.9 3.7E-09 1.3E-13 65.0 6.0 55 1-56 97-151 (165)
53 1pbj_A Hypothetical protein; s 98.9 2.5E-09 8.6E-14 62.4 5.0 51 2-53 70-120 (125)
54 3ctu_A CBS domain protein; str 98.9 3.4E-09 1.2E-13 64.3 5.7 57 1-59 90-146 (156)
55 2emq_A Hypothetical conserved 98.9 6E-09 2.1E-13 63.1 6.7 56 1-58 87-142 (157)
56 2yvy_A MGTE, Mg2+ transporter 98.9 4.1E-09 1.4E-13 70.1 6.4 55 1-55 203-257 (278)
57 4gqw_A CBS domain-containing p 98.9 3.7E-09 1.3E-13 63.4 5.6 51 1-51 9-61 (152)
58 2ef7_A Hypothetical protein ST 98.9 6.6E-09 2.3E-13 61.3 6.6 53 1-54 8-60 (133)
59 4fry_A Putative signal-transdu 98.9 3E-09 1E-13 64.6 5.3 55 2-57 83-137 (157)
60 2yzi_A Hypothetical protein PH 98.9 4.2E-09 1.4E-13 62.6 5.7 55 1-56 76-130 (138)
61 3nqr_A Magnesium and cobalt ef 98.9 1.5E-09 5.1E-14 64.1 3.7 52 1-52 7-61 (127)
62 3fv6_A YQZB protein; CBS domai 98.9 6.2E-09 2.1E-13 63.6 6.6 52 1-53 21-72 (159)
63 3jtf_A Magnesium and cobalt ef 98.9 2E-09 6.7E-14 63.8 4.2 53 1-53 9-64 (129)
64 2uv4_A 5'-AMP-activated protei 98.9 3.4E-09 1.1E-13 64.3 5.3 49 5-53 101-149 (152)
65 2rc3_A CBS domain; in SITU pro 98.9 3.3E-09 1.1E-13 62.9 5.1 50 2-52 11-63 (135)
66 1pvm_A Conserved hypothetical 98.9 4.8E-09 1.6E-13 65.6 6.1 53 1-53 79-131 (184)
67 1y5h_A Hypothetical protein RV 98.9 3.2E-09 1.1E-13 62.7 5.0 51 2-53 79-129 (133)
68 3lqn_A CBS domain protein; csg 98.9 2.5E-09 8.4E-14 64.5 4.5 52 2-53 20-73 (150)
69 1yav_A Hypothetical protein BS 98.9 2.9E-09 9.8E-14 64.9 4.8 52 2-53 19-72 (159)
70 2oux_A Magnesium transporter; 98.9 4.7E-09 1.6E-13 70.3 6.2 55 2-56 206-260 (286)
71 2j9l_A Chloride channel protei 98.9 5.8E-09 2E-13 64.6 6.1 56 1-57 112-167 (185)
72 3ocm_A Putative membrane prote 98.9 6.1E-09 2.1E-13 65.1 6.2 54 3-56 105-158 (173)
73 3ddj_A CBS domain-containing p 98.8 5.2E-09 1.8E-13 69.3 6.0 56 2-57 232-287 (296)
74 2nyc_A Nuclear protein SNF4; b 98.8 2.9E-09 9.9E-14 63.4 4.3 49 6-54 92-140 (144)
75 1o50_A CBS domain-containing p 98.8 1.4E-08 4.7E-13 61.9 7.4 52 1-53 20-72 (157)
76 3hf7_A Uncharacterized CBS-dom 98.8 4.7E-09 1.6E-13 62.4 5.1 54 1-54 6-62 (130)
77 3lfr_A Putative metal ION tran 98.8 2.9E-09 9.9E-14 63.7 3.9 53 1-53 7-62 (136)
78 3ocm_A Putative membrane prote 98.8 1.7E-08 5.9E-13 63.0 7.4 54 1-54 40-96 (173)
79 3sl7_A CBS domain-containing p 98.8 2.8E-09 9.7E-14 65.7 3.6 51 1-51 8-60 (180)
80 2pfi_A Chloride channel protei 98.8 8.1E-09 2.8E-13 62.7 5.5 50 7-57 100-149 (164)
81 3t4n_C Nuclear protein SNF4; C 98.8 9E-09 3.1E-13 68.8 6.0 52 3-54 196-247 (323)
82 1yav_A Hypothetical protein BS 98.8 9.1E-09 3.1E-13 62.7 5.5 55 2-58 91-145 (159)
83 3oi8_A Uncharacterized protein 98.8 5.3E-09 1.8E-13 63.9 4.4 52 1-52 42-96 (156)
84 3oco_A Hemolysin-like protein 98.8 5.6E-09 1.9E-13 63.5 4.4 54 1-54 24-81 (153)
85 3kh5_A Protein MJ1225; AMPK, A 98.8 1.7E-08 5.7E-13 65.8 6.6 53 1-53 8-61 (280)
86 3kh5_A Protein MJ1225; AMPK, A 98.8 2.7E-08 9.1E-13 64.8 7.6 55 1-55 88-142 (280)
87 2zy9_A Mg2+ transporter MGTE; 98.8 1.9E-08 6.6E-13 71.8 7.2 55 1-55 223-277 (473)
88 2uv4_A 5'-AMP-activated protei 98.8 2.5E-08 8.5E-13 60.4 6.7 50 5-54 29-78 (152)
89 3t4n_C Nuclear protein SNF4; C 98.8 1.6E-08 5.5E-13 67.6 6.4 49 6-54 271-319 (323)
90 2j9l_A Chloride channel protei 98.8 1.6E-08 5.4E-13 62.6 5.7 54 1-54 15-76 (185)
91 2d4z_A Chloride channel protei 98.7 1.8E-08 6.3E-13 66.9 6.1 52 2-54 194-245 (250)
92 3kxr_A Magnesium transporter, 98.7 2.9E-08 1E-12 63.7 6.8 52 1-52 58-112 (205)
93 3k2v_A Putative D-arabinose 5- 98.7 1.1E-08 3.6E-13 61.9 4.1 48 2-50 100-147 (149)
94 3org_A CMCLC; transporter, tra 98.7 2.1E-08 7.1E-13 73.7 6.3 52 1-53 572-623 (632)
95 2v8q_E 5'-AMP-activated protei 98.7 3.3E-08 1.1E-12 66.3 6.8 54 3-56 271-324 (330)
96 1vr9_A CBS domain protein/ACT 98.7 3.5E-08 1.2E-12 63.3 6.1 52 1-52 17-68 (213)
97 2qrd_G Protein C1556.08C; AMPK 98.7 4.6E-08 1.6E-12 65.7 6.4 53 5-57 265-317 (334)
98 3ddj_A CBS domain-containing p 98.7 4.6E-08 1.6E-12 64.6 6.3 53 2-54 161-213 (296)
99 3pc3_A CG1753, isoform A; CBS, 98.6 4.8E-08 1.6E-12 70.3 6.3 55 1-55 388-444 (527)
100 2qrd_G Protein C1556.08C; AMPK 98.6 6E-08 2.1E-12 65.1 6.1 53 2-54 190-242 (334)
101 2yzq_A Putative uncharacterize 98.6 1.2E-07 4.1E-12 62.0 7.4 51 1-51 64-114 (282)
102 4fry_A Putative signal-transdu 98.6 3.1E-08 1E-12 60.1 3.8 48 5-53 21-68 (157)
103 2oux_A Magnesium transporter; 98.6 6.3E-08 2.2E-12 64.8 5.1 52 1-52 141-197 (286)
104 2v8q_E 5'-AMP-activated protei 98.6 1.4E-07 4.7E-12 63.3 6.5 54 1-54 122-176 (330)
105 2yvy_A MGTE, Mg2+ transporter 98.6 1.5E-07 5.2E-12 62.5 6.5 52 1-52 139-195 (278)
106 3usb_A Inosine-5'-monophosphat 98.5 1.7E-07 5.8E-12 67.7 6.0 54 2-55 180-234 (511)
107 1zfj_A Inosine monophosphate d 98.5 5.6E-07 1.9E-11 64.1 8.3 54 1-54 156-210 (491)
108 4fxs_A Inosine-5'-monophosphat 98.4 2.9E-07 1E-11 66.2 5.7 50 1-50 93-142 (496)
109 1me8_A Inosine-5'-monophosphat 98.3 5.4E-08 1.8E-12 70.0 0.0 55 1-55 165-221 (503)
110 3org_A CMCLC; transporter, tra 98.3 1.7E-07 5.7E-12 68.9 2.3 53 1-53 457-512 (632)
111 2zy9_A Mg2+ transporter MGTE; 98.3 1E-06 3.5E-11 62.9 5.4 52 1-52 159-215 (473)
112 1zfj_A Inosine monophosphate d 98.3 2.4E-06 8.1E-11 60.9 7.1 51 1-51 94-146 (491)
113 3usb_A Inosine-5'-monophosphat 98.3 1.4E-06 4.8E-11 62.9 5.9 50 2-51 118-169 (511)
114 4avf_A Inosine-5'-monophosphat 98.2 1.4E-07 4.6E-12 67.8 0.0 53 1-53 151-205 (490)
115 1vrd_A Inosine-5'-monophosphat 98.2 1.5E-07 5.1E-12 67.2 0.1 54 1-54 159-214 (494)
116 4af0_A Inosine-5'-monophosphat 98.2 1.6E-07 5.5E-12 68.3 0.0 54 1-54 204-257 (556)
117 1vrd_A Inosine-5'-monophosphat 98.2 2.1E-07 7.1E-12 66.5 0.0 51 1-51 99-149 (494)
118 3pc3_A CG1753, isoform A; CBS, 98.2 2.3E-06 7.9E-11 61.6 4.9 55 1-57 455-513 (527)
119 2cu0_A Inosine-5'-monophosphat 98.1 2.7E-07 9.4E-12 65.9 0.0 53 1-53 154-206 (486)
120 1me8_A Inosine-5'-monophosphat 98.1 4.1E-07 1.4E-11 65.4 0.2 49 3-51 103-154 (503)
121 4fxs_A Inosine-5'-monophosphat 98.1 2.3E-07 7.8E-12 66.8 -1.3 53 1-53 153-207 (496)
122 4avf_A Inosine-5'-monophosphat 98.0 8.8E-07 3E-11 63.6 0.2 49 1-50 92-140 (490)
123 1jcn_A Inosine monophosphate d 98.0 3.5E-07 1.2E-11 65.7 -2.4 52 1-52 177-230 (514)
124 1jcn_A Inosine monophosphate d 97.9 1.3E-06 4.5E-11 62.7 -0.6 51 1-51 112-165 (514)
125 4af0_A Inosine-5'-monophosphat 97.6 9.2E-06 3.1E-10 59.2 0.0 49 3-51 144-195 (556)
126 2cu0_A Inosine-5'-monophosphat 97.5 1.5E-05 5.2E-10 56.9 0.0 49 2-51 98-146 (486)
127 1tif_A IF3-N, translation init 78.4 4.8 0.00016 22.0 4.3 27 28-54 13-39 (78)
128 3by8_A Sensor protein DCUS; hi 71.1 2.7 9.3E-05 24.6 2.3 18 31-48 111-128 (142)
129 2qkp_A Uncharacterized protein 63.8 4.4 0.00015 23.9 2.2 16 29-44 109-124 (151)
130 1p0z_A Sensor kinase CITA; tra 62.2 6.7 0.00023 22.4 2.7 15 31-45 106-120 (131)
131 3tjo_A Serine protease HTRA1; 60.2 6.1 0.00021 25.0 2.5 17 30-46 190-206 (231)
132 2w5e_A Putative serine proteas 57.2 6.9 0.00024 23.8 2.3 20 26-45 124-143 (163)
133 3lgi_A Protease DEGS; stress-s 56.8 6.5 0.00022 24.9 2.2 19 28-46 175-193 (237)
134 3k6y_A Serine protease, possib 56.1 7.9 0.00027 24.4 2.5 19 28-46 182-200 (237)
135 3sti_A Protease DEGQ; serine p 54.1 8.8 0.0003 24.8 2.5 20 27-46 185-204 (245)
136 2as9_A Serine protease; trypsi 53.6 7.9 0.00027 23.9 2.1 18 29-46 158-175 (210)
137 2w7s_A Serine protease SPLA; h 52.6 10 0.00034 23.0 2.5 18 30-47 155-172 (200)
138 3fan_A Non-structural protein; 50.6 8.9 0.0003 24.8 2.0 23 26-48 124-146 (213)
139 2vid_A Serine protease SPLB; h 50.3 11 0.00039 22.6 2.5 17 31-47 159-175 (204)
140 1qtf_A Exfoliative toxin B; se 48.9 12 0.00042 23.7 2.5 17 31-47 188-204 (246)
141 3k2t_A LMO2511 protein; lister 46.8 25 0.00086 17.8 3.1 26 12-37 11-36 (57)
142 3ka5_A Ribosome-associated pro 45.5 32 0.0011 17.9 3.4 33 12-44 11-43 (65)
143 1agj_A Epidermolytic toxin A; 44.6 15 0.00051 23.0 2.4 16 31-46 197-212 (242)
144 3num_A Serine protease HTRA1; 44.1 15 0.00051 24.4 2.5 15 31-45 174-188 (332)
145 1l1j_A Heat shock protease HTR 43.2 14 0.00047 23.6 2.1 17 30-46 184-200 (239)
146 1lcy_A HTRA2 serine protease; 42.3 17 0.00057 24.2 2.5 17 29-45 173-189 (325)
147 3qo6_A Protease DO-like 1, chl 42.2 17 0.00057 24.5 2.5 18 29-46 180-197 (348)
148 3lyv_A Ribosome-associated fac 41.8 35 0.0012 17.8 3.2 26 12-37 12-37 (66)
149 4dah_A Sporulation kinase D; a 41.8 20 0.0007 21.6 2.7 20 30-49 129-152 (217)
150 1svj_A Potassium-transporting 41.6 29 0.00098 20.9 3.3 32 16-48 121-152 (156)
151 1te0_A Protease DEGS; two doma 41.4 18 0.00062 23.9 2.5 18 29-46 165-182 (318)
152 1qst_A TGCN5 histone acetyl tr 41.0 43 0.0015 18.7 4.0 22 25-46 43-64 (160)
153 4agk_A Capsid protein, coat pr 40.8 19 0.00065 21.8 2.3 15 30-44 110-124 (158)
154 4e0a_A BH1408 protein; structu 39.6 43 0.0015 18.3 3.7 33 14-46 40-72 (164)
155 1vcp_A Semliki forest virus ca 38.9 21 0.00073 21.3 2.3 15 30-44 102-116 (149)
156 1y8t_A Hypothetical protein RV 38.8 20 0.00069 23.7 2.4 17 30-46 170-186 (324)
157 3stj_A Protease DEGQ; serine p 38.8 20 0.0007 24.2 2.5 17 29-45 187-203 (345)
158 1svp_A Sindbis virus capsid pr 38.8 21 0.00073 21.6 2.3 14 31-44 112-125 (161)
159 4hi4_A Aerotaxis transducer AE 38.6 21 0.0007 19.2 2.1 16 29-44 97-112 (121)
160 1ep5_B Capsid protein C, coat 36.7 24 0.00082 21.3 2.3 15 30-44 109-123 (157)
161 2fp7_B Serine protease NS3; fl 36.4 21 0.00072 22.3 2.0 16 29-44 120-135 (172)
162 1ygh_A ADA4, protein (transcri 36.2 61 0.0021 18.4 4.7 25 22-46 41-65 (164)
163 2ggv_B NS3, non-structural pro 35.9 24 0.00082 22.2 2.3 16 29-44 134-149 (185)
164 2o8l_A V8 protease, taphylococ 35.0 26 0.00089 22.6 2.5 17 30-46 170-186 (274)
165 3vol_A Aerotaxis transducer AE 34.9 52 0.0018 20.3 3.8 16 29-44 114-129 (233)
166 2lrt_A Uncharacterized protein 34.5 64 0.0022 18.2 4.4 26 19-44 105-130 (152)
167 2fom_B Polyprotein; flavivirus 34.4 23 0.0008 22.3 2.0 16 29-44 135-150 (185)
168 3t9y_A Acetyltransferase, GNAT 33.8 58 0.002 17.5 3.9 20 27-46 49-68 (150)
169 1f5m_A GAF; CGMP binding, sign 33.1 31 0.0011 20.8 2.5 17 30-46 134-150 (180)
170 2pny_A Isopentenyl-diphosphate 33.0 53 0.0018 21.0 3.7 21 29-49 38-58 (246)
171 3e90_B NS3 protease; trypsin-l 32.0 28 0.00094 22.2 2.1 18 27-44 137-154 (198)
172 2dho_A Isopentenyl-diphosphate 31.8 57 0.002 20.6 3.7 22 28-49 26-47 (235)
173 2yew_A Capsid protein, coat pr 31.7 32 0.0011 22.6 2.4 14 31-44 207-220 (253)
174 2h3o_A MERF; membrane protein, 31.3 9.9 0.00034 19.8 -0.0 16 68-83 8-23 (61)
175 4fd7_A Putative arylalkylamine 31.0 91 0.0031 19.1 4.5 20 25-44 83-102 (238)
176 3lif_A Putative diguanylate cy 31.0 39 0.0013 20.7 2.7 14 31-44 132-145 (254)
177 3mgd_A Predicted acetyltransfe 30.6 68 0.0023 17.3 4.0 18 29-46 51-68 (157)
178 1wcz_A Glutamyl endopeptidase; 30.6 34 0.0012 21.9 2.5 16 31-46 171-186 (268)
179 3u1j_B Serine protease NS3; se 30.5 30 0.001 21.9 2.0 18 27-44 142-159 (191)
180 1n9l_A PHOT-LOV1, putative blu 30.1 42 0.0014 17.4 2.5 15 30-44 87-101 (109)
181 1kxf_A Sindbis virus capsid pr 30.1 33 0.0011 22.7 2.3 14 31-44 217-230 (264)
182 1bo4_A Protein (serratia marce 30.1 72 0.0025 17.4 3.8 19 28-46 75-93 (168)
183 2dxq_A AGR_C_4057P, acetyltran 30.0 74 0.0025 17.5 4.0 18 29-46 51-68 (150)
184 3zxu_A MCM21; cell cycle, COMA 29.6 37 0.0013 23.0 2.5 23 22-44 119-141 (296)
185 3luq_A Sensor protein; PAS, hi 29.3 46 0.0016 16.6 2.5 15 30-44 93-107 (114)
186 3e8l_C Serine proteinase inhib 29.3 11 0.00038 23.7 -0.1 15 25-39 3-17 (185)
187 3dsb_A Putative acetyltransfer 29.3 55 0.0019 17.6 3.0 19 28-46 54-72 (157)
188 3i3g_A N-acetyltransferase; ma 29.1 75 0.0026 17.4 4.0 19 28-46 65-83 (161)
189 1h75_A Glutaredoxin-like prote 28.3 51 0.0018 16.3 2.6 28 20-47 40-67 (81)
190 3cax_A Uncharacterized protein 28.2 33 0.0011 23.2 2.1 17 28-44 322-338 (369)
191 4hde_A SCO1/SENC family lipopr 27.8 67 0.0023 18.8 3.3 16 30-45 136-151 (170)
192 3ksh_A Putative uncharacterize 27.6 41 0.0014 20.3 2.3 18 29-47 116-133 (160)
193 1z4e_A Transcriptional regulat 27.6 80 0.0028 17.2 3.9 17 29-45 55-71 (153)
194 2aj6_A Hypothetical protein MW 27.6 84 0.0029 17.4 4.0 19 28-46 64-82 (159)
195 3jvn_A Acetyltransferase; alph 27.5 81 0.0028 17.2 3.8 19 27-45 54-72 (166)
196 3pv2_A DEGQ; trypsin fold, PDZ 27.1 41 0.0014 23.6 2.5 15 31-45 207-221 (451)
197 3rfb_A Putative uncharacterize 26.8 43 0.0015 20.5 2.3 18 29-47 117-134 (171)
198 3lkw_A Fusion protein of nonst 26.6 37 0.0013 22.2 2.0 18 27-44 183-200 (236)
199 4edg_A DNA primase; catalytic 26.4 43 0.0015 22.7 2.5 15 30-44 99-113 (329)
200 2q04_A Acetoin utilization pro 26.4 97 0.0033 19.1 4.0 28 19-46 51-78 (211)
201 3mxq_A Sensor protein; PSI2, M 26.4 41 0.0014 19.7 2.1 17 28-44 122-138 (152)
202 4eu0_A PELD; C-DI-GMP, signali 26.0 50 0.0017 22.1 2.7 19 28-46 105-123 (298)
203 1mbm_A NSP4 proteinase, chymot 25.9 45 0.0016 21.2 2.3 14 32-46 117-130 (198)
204 2h5c_A Alpha-lytic protease; s 25.7 52 0.0018 20.3 2.6 17 31-47 145-161 (198)
205 2eui_A Probable acetyltransfer 25.7 83 0.0028 16.7 4.1 17 30-46 48-66 (153)
206 2d4p_A Hypothetical protein TT 25.0 26 0.00089 21.0 1.0 29 16-46 24-52 (141)
207 4fln_A Protease DO-like 2, chl 24.7 40 0.0014 24.5 2.1 16 30-45 201-216 (539)
208 2cy2_A TTHA1209, probable acet 24.7 92 0.0031 16.9 4.2 18 29-46 59-76 (174)
209 3mmh_A FRMSR, methionine-R-sul 24.6 50 0.0017 19.8 2.3 17 30-47 118-134 (167)
210 3e0y_A Conserved domain protei 24.5 58 0.002 18.2 2.5 16 30-46 122-137 (181)
211 1s3z_A Aminoglycoside 6'-N-ace 24.5 96 0.0033 17.0 4.0 18 29-46 63-80 (165)
212 1fov_A Glutaredoxin 3, GRX3; a 24.4 73 0.0025 15.6 2.9 18 25-42 46-63 (82)
213 4h89_A GCN5-related N-acetyltr 24.1 75 0.0026 18.1 3.0 19 28-46 60-78 (173)
214 3exn_A Probable acetyltransfer 24.0 93 0.0032 16.7 4.0 19 29-47 62-80 (160)
215 1qsm_A HPA2 histone acetyltran 24.0 91 0.0031 16.5 3.8 17 30-46 53-71 (152)
216 1pm3_A MTH1895; unknown functi 23.8 34 0.0011 18.9 1.3 23 22-44 20-43 (97)
217 1ky9_A Protease DO, DEGP, HTRA 23.7 51 0.0018 23.0 2.5 18 28-45 209-226 (448)
218 3ey5_A Acetyltransferase-like, 23.5 1.1E+02 0.0038 17.4 4.4 32 15-46 36-67 (181)
219 3lyx_A Sensory BOX/ggdef domai 23.5 57 0.0019 16.1 2.2 15 30-44 98-112 (124)
220 4evy_A Aminoglycoside N(6')-ac 23.5 1E+02 0.0035 17.0 3.8 18 29-46 63-80 (166)
221 3hcy_A Putative two-component 23.4 56 0.0019 17.9 2.3 17 29-46 94-110 (151)
222 3fyn_A Integron gene cassette 23.3 68 0.0023 18.0 2.7 18 29-46 71-88 (176)
223 3k3c_A Protein RV1364C/MT1410; 23.1 53 0.0018 17.9 2.1 15 30-44 112-126 (158)
224 1ykd_A Adenylate cyclase; GAF 22.9 62 0.0021 21.3 2.7 19 28-46 122-140 (398)
225 2z10_A Ribosomal-protein-alani 22.9 1.1E+02 0.0039 17.3 4.3 20 28-47 62-81 (194)
226 2hje_A Autoinducer 2 sensor ki 22.8 50 0.0017 21.4 2.1 17 28-44 119-136 (221)
227 3dba_A CONE CGMP-specific 3',5 22.6 57 0.002 19.1 2.3 19 27-46 125-143 (180)
228 4ag7_A Glucosamine-6-phosphate 22.6 1E+02 0.0035 16.7 4.3 20 27-46 66-87 (165)
229 4a8c_A Periplasmic PH-dependen 22.6 37 0.0013 23.6 1.6 18 28-45 186-203 (436)
230 3ci6_A Phosphoenolpyruvate-pro 22.5 68 0.0023 17.5 2.5 16 30-46 119-134 (171)
231 3f8k_A Protein acetyltransfera 22.4 68 0.0023 17.5 2.5 17 31-47 56-72 (160)
232 3b47_A GSU0582, methyl-accepti 22.1 69 0.0023 18.5 2.5 8 37-44 112-119 (134)
233 2rli_A SCO2 protein homolog, m 21.9 1.2E+02 0.004 17.1 4.8 15 30-44 132-146 (171)
234 2fkb_A Putative nudix hydrolas 21.8 1.3E+02 0.0043 17.4 4.1 24 28-51 9-32 (180)
235 2qml_A BH2621 protein; structu 21.3 1.3E+02 0.0043 17.2 4.0 18 30-47 71-88 (198)
236 2i79_A Acetyltransferase, GNAT 21.2 1.2E+02 0.0041 16.9 4.3 18 30-47 60-77 (172)
237 4evm_A Thioredoxin family prot 21.2 1E+02 0.0035 16.2 3.7 22 23-44 100-121 (138)
238 3me7_A Putative uncharacterize 21.1 1.3E+02 0.0045 17.3 4.6 15 30-44 129-143 (170)
239 3s6f_A Hypothetical acetyltran 21.0 1.1E+02 0.0039 16.6 3.6 31 15-46 36-66 (145)
240 1dd9_A DNA primase, DNAG; topr 20.9 64 0.0022 21.9 2.5 15 30-44 110-124 (338)
241 3trc_A Phosphoenolpyruvate-pro 20.9 75 0.0026 17.5 2.5 16 30-46 117-132 (171)
242 2hz5_A Dynein light chain 2A, 20.7 71 0.0024 18.1 2.3 26 15-40 13-39 (106)
243 2ggt_A SCO1 protein homolog, m 20.6 1.2E+02 0.0042 16.8 6.8 15 30-44 129-143 (164)
244 3te4_A GH12636P, dopamine N ac 20.4 1.1E+02 0.0038 18.1 3.3 19 25-44 55-73 (215)
245 3v67_A Sensor protein CPXA; PA 20.3 1.3E+02 0.0043 17.8 3.4 34 13-46 34-73 (138)
246 2jx0_A ARF GTPase-activating p 20.2 37 0.0013 20.4 1.0 14 66-79 109-122 (135)
247 3oov_A Methyl-accepting chemot 20.2 80 0.0027 17.4 2.5 17 29-46 116-132 (169)
248 2bue_A AAC(6')-IB; GNAT, trans 20.1 1.1E+02 0.0037 17.4 3.1 18 30-47 79-96 (202)
249 1y9w_A Acetyltransferase; stru 20.0 92 0.0032 16.7 2.7 16 30-45 41-56 (140)
250 3fld_A Protein TRAI, DNA helic 20.0 79 0.0027 19.3 2.5 15 30-44 53-67 (153)
No 1
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.26 E-value=2.7e-11 Score=66.46 Aligned_cols=62 Identities=8% Similarity=0.034 Sum_probs=50.1
Q ss_pred CeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhhhhhhccccchh
Q 047148 7 PECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCYEWHYCNERDLT 69 (84)
Q Consensus 7 ~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~~~~~~~~~~~~ 69 (84)
++++++++++.+|++.|.+++++++||+| +|+++||++.+|+..............+.+++|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iM 63 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhc
Confidence 57899999999999999999999999998 689999999999987654443333444555555
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.20 E-value=2.5e-11 Score=75.29 Aligned_cols=52 Identities=15% Similarity=0.214 Sum_probs=48.7
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
|+|++++.++++++++.+|++.|.+++++.+||+|++|+++|+++..|++..
T Consensus 22 diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 22 DILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRG 73 (170)
T ss_dssp GGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGG
T ss_pred HhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHH
Confidence 5899999999999999999999999999999999999999999999988643
No 3
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.14 E-value=2.6e-10 Score=61.11 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=43.6
Q ss_pred CeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 7 PECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 7 ~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
+.++++++++.++++.|.+++.+.+||+|+ |+++|+++..++......
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 568899999999999999999999999996 999999999999877543
No 4
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.08 E-value=4.5e-10 Score=72.21 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=51.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++.......
T Consensus 120 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 120 SLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp GGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 478888999999999999999999999999999999999999999999877765443
No 5
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.08 E-value=2.9e-10 Score=67.28 Aligned_cols=59 Identities=29% Similarity=0.364 Sum_probs=51.1
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCYE 59 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~~ 59 (84)
++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++..........
T Consensus 71 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 71 EFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp GTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC--
T ss_pred HHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHHH
Confidence 36777888999999999999999999999999999889999999999998877655443
No 6
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.07 E-value=1.5e-10 Score=71.74 Aligned_cols=51 Identities=20% Similarity=0.208 Sum_probs=47.4
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+|++++.++++++++.++++.|.+++++++||+| +|+++|+|+..|++...
T Consensus 110 im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 110 VMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred hcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 6889999999999999999999999999999998 69999999999997654
No 7
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.06 E-value=2.8e-10 Score=70.26 Aligned_cols=57 Identities=32% Similarity=0.452 Sum_probs=51.1
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCY 58 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~ 58 (84)
+|++++.++++++++.++++.|.+++.+++||+|++|+++|+|+..+++........
T Consensus 103 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~ 159 (180)
T 3sl7_A 103 LMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKR 159 (180)
T ss_dssp HSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHH
T ss_pred HhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhh
Confidence 577788899999999999999999999999999989999999999999887765443
No 8
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.06 E-value=5.6e-10 Score=67.44 Aligned_cols=54 Identities=19% Similarity=0.236 Sum_probs=49.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++.....
T Consensus 92 ~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 92 EIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp GTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred Hhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 467 778999999999999999999999999999988999999999999877643
No 9
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.06 E-value=5e-10 Score=72.87 Aligned_cols=55 Identities=20% Similarity=0.214 Sum_probs=51.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++++.++++++++.+|++.|.+++++++||+|++|+++|+++..++......
T Consensus 11 ~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 11 DLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp GSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHC
T ss_pred HhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 5899999999999999999999999999999999988999999999999877643
No 10
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.05 E-value=8.2e-10 Score=66.68 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=49.1
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~~~ 54 (84)
++|++ ++.++++++++.++++.|.+++.+.+||+|++ |+++|+++..++.....
T Consensus 27 diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~ 83 (148)
T 3lv9_A 27 EIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKI 83 (148)
T ss_dssp GTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred HccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 47887 88999999999999999999999999999987 89999999999977643
No 11
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.05 E-value=5.2e-10 Score=65.20 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=48.7
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++...
T Consensus 66 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 66 EIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp GTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHh
Confidence 46888889999999999999999999999999999889999999999997764
No 12
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.05 E-value=8.3e-10 Score=65.46 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=46.6
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
+|.+ +.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++.....
T Consensus 74 ~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 74 LVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp GCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred HhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 5644 7899999999999999999999999999988999999999999877653
No 13
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.04 E-value=6.1e-10 Score=67.78 Aligned_cols=56 Identities=14% Similarity=0.158 Sum_probs=49.7
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++.......
T Consensus 90 ~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~ 145 (153)
T 3oco_A 90 TIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNL 145 (153)
T ss_dssp GTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC--
T ss_pred HHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccC
Confidence 467 78899999999999999999999999999998899999999999988776543
No 14
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.03 E-value=9.1e-10 Score=66.43 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=49.3
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCYEW 60 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~~~ 60 (84)
++|.+++.++++++++.++++.|.+++. +||+|++|+++|+|+..+++.........+
T Consensus 91 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~~~ 148 (150)
T 3lqn_A 91 QVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVRQH 148 (150)
T ss_dssp GTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC---
T ss_pred HHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhHhh
Confidence 4688888999999999999999998876 999998999999999999988876655443
No 15
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.03 E-value=7.3e-10 Score=68.85 Aligned_cols=55 Identities=9% Similarity=0.075 Sum_probs=49.9
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++......
T Consensus 111 ~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 111 DLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp GGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred HHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 467 7889999999999999999999999999999889999999999998876544
No 16
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=4.7e-10 Score=66.81 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=47.5
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
+| +++.++++++++.++++.|.+++.+.+||+|++|+++|+++..|++.....
T Consensus 75 ~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 75 AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 45 567899999999999999999999999999989999999999999877543
No 17
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.02 E-value=4.6e-10 Score=67.35 Aligned_cols=55 Identities=29% Similarity=0.500 Sum_probs=49.3
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
+|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++......
T Consensus 90 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 90 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 5777788999999999999999999999999999889999999999998876543
No 18
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.02 E-value=8e-10 Score=65.27 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=46.0
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+|.+ +.++++++++.++++.|.+++.+++||+|++|+++|+++..+++...
T Consensus 74 ~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 74 VLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp HCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred HcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 4644 67899999999999999999999999999999999999999998654
No 19
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.01 E-value=4.9e-10 Score=67.11 Aligned_cols=54 Identities=15% Similarity=0.173 Sum_probs=47.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++.....
T Consensus 74 ~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 74 KLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp GTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--
T ss_pred HHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 36755 7899999999999999999999999999989999999999999876544
No 20
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.01 E-value=6.6e-10 Score=68.54 Aligned_cols=55 Identities=22% Similarity=0.311 Sum_probs=48.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
++|++++.++++++++.++++.|.+++ .+||+|++|+++|+|+..|++.......
T Consensus 90 ~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 90 HMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp GTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHS
T ss_pred HhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHh
Confidence 478899999999999999999998765 4999999999999999999988775443
No 21
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.01 E-value=4.1e-10 Score=66.52 Aligned_cols=54 Identities=15% Similarity=0.147 Sum_probs=49.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|.+++.++++++++.++++.|.+++.+++||+|++|+++|+++..+++....
T Consensus 72 ~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 72 EELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp GGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 367788889999999999999999999999999998999999999999987653
No 22
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.00 E-value=1.5e-09 Score=67.97 Aligned_cols=54 Identities=28% Similarity=0.373 Sum_probs=49.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|++++.++++++++.+|++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 13 ~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 13 KIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp GTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred HhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 478888999999999999999999999999999998899999999999987643
No 23
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.98 E-value=2.5e-09 Score=71.04 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=50.3
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC--CcEEEEEEHHHHHHHHHhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKD--GGVAACLDVLQITHAAISM 56 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~--g~l~Giv~~~~i~~~~~~~ 56 (84)
|+|+++++++.+++++.++.++|.+++++.+||+|++ |+++|+|+..+++......
T Consensus 17 diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 17 DIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 6899999999999999999999999999999999964 6899999999998765444
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.98 E-value=8e-10 Score=64.38 Aligned_cols=54 Identities=22% Similarity=0.434 Sum_probs=49.3
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 5 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~ 58 (122)
T 3kpb_A 5 DILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALA 58 (122)
T ss_dssp HHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHH
T ss_pred HhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHH
Confidence 468888999999999999999999999999999998999999999999977643
No 25
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.98 E-value=1.6e-09 Score=65.57 Aligned_cols=53 Identities=13% Similarity=0.122 Sum_probs=49.0
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++....
T Consensus 32 dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 86 (149)
T 3k2v_A 32 DIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVF 86 (149)
T ss_dssp GTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHH
Confidence 47888 889999999999999999999999999999889999999999998654
No 26
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.97 E-value=8e-10 Score=65.51 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=46.4
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+| +++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++....
T Consensus 77 ~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 77 VM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp HS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred Hh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 46 35779999999999999999999999999998899999999999987643
No 27
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.97 E-value=7.9e-10 Score=67.43 Aligned_cols=53 Identities=30% Similarity=0.518 Sum_probs=48.2
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
+|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++.....
T Consensus 101 im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 101 IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 5778 8899999999999999999999999999988999999999999876643
No 28
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.97 E-value=1.1e-09 Score=67.43 Aligned_cols=54 Identities=19% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCC---CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 2 VMTS---SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 2 vm~~---~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
+|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++......
T Consensus 29 im~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 85 (165)
T 3fhm_A 29 LLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAG 85 (165)
T ss_dssp HHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 4653 68899999999999999999999999999988999999999999776544
No 29
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.97 E-value=2.5e-09 Score=68.75 Aligned_cols=55 Identities=18% Similarity=0.194 Sum_probs=50.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++++.++++++++.++++.|.+++++.+||+|++|+++|+++..|++.....
T Consensus 76 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 76 NKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp GGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 4788889999999999999999999999999999988999999999999876643
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.96 E-value=1.4e-09 Score=64.62 Aligned_cols=53 Identities=25% Similarity=0.310 Sum_probs=47.3
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCC-----CCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGK-----FLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~-----~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+|.+++.++++++++.++++.|.+++ .+.+||+|++|+++|+++..+++....
T Consensus 78 ~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 78 VMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp HSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 57788889999999999999999999 999999998899999999999977653
No 31
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.96 E-value=1.7e-09 Score=64.15 Aligned_cols=53 Identities=28% Similarity=0.458 Sum_probs=48.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+++..+++....
T Consensus 78 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 78 EIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred HhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 46888889999999999999999999999999999 799999999999987654
No 32
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.95 E-value=2e-09 Score=63.99 Aligned_cols=51 Identities=24% Similarity=0.244 Sum_probs=47.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
++|++++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++..
T Consensus 11 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 11 VYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIR 61 (138)
T ss_dssp GTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Confidence 478888999999999999999999999999999998899999999999964
No 33
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.95 E-value=4.8e-10 Score=72.98 Aligned_cols=53 Identities=19% Similarity=0.348 Sum_probs=44.4
Q ss_pred CCCC-CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMT-SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~-~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|+ +++.++++++++.++++.|.+++++.+||+|++|+++|+++..+++...
T Consensus 189 ~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 189 YVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp HHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred eEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 3688 8899999999999999999999999999999899999999999987654
No 34
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.94 E-value=1.9e-09 Score=64.52 Aligned_cols=52 Identities=15% Similarity=0.247 Sum_probs=47.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|.+++.+++++ ++.++++.|.+++.+.+||+|++|+++|+++..+++...
T Consensus 75 ~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 75 PIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp GGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred HHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 4688888999999 999999999999999999999889999999999986654
No 35
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.94 E-value=1.4e-09 Score=66.67 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=49.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|++++.+++++.++.+|++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 9 dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 9 DMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp GTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 478888899999999999999999999999999998899999999999977654
No 36
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.93 E-value=2.2e-09 Score=63.32 Aligned_cols=52 Identities=12% Similarity=0.122 Sum_probs=47.9
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.++++.|.+++.+.+||+|+ |+++|+++..++....
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~ 60 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGR 60 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTC
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 478999999999999999999999999999999998 9999999999997643
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.92 E-value=3.3e-09 Score=62.91 Aligned_cols=52 Identities=27% Similarity=0.296 Sum_probs=47.6
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHH-HHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQI-THA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i-~~~ 52 (84)
++|++++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++ ...
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 64 (138)
T 2p9m_A 12 DVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNL 64 (138)
T ss_dssp GTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHH
Confidence 4788888999999999999999999999999999988999999999998 654
No 38
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.92 E-value=3e-09 Score=63.62 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=49.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCC--cEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDG--GVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g--~l~Giv~~~~i~~~~~ 54 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++| +++|+++..++.....
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~ 64 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVA 64 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHh
Confidence 47888899999999999999999999999999999888 9999999999977643
No 39
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.92 E-value=6.2e-10 Score=65.86 Aligned_cols=51 Identities=20% Similarity=0.272 Sum_probs=46.5
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++..
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 12 DIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVI 62 (133)
T ss_dssp HHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHH
T ss_pred HHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHH
Confidence 357788889999999999999999999999999988899999999999874
No 40
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.92 E-value=4.7e-09 Score=64.66 Aligned_cols=53 Identities=9% Similarity=0.160 Sum_probs=46.6
Q ss_pred CCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+|++ +..++.++.++.+|++.|.+++++++||+|++|+++|+++..|+.....
T Consensus 20 iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~ 74 (156)
T 3k6e_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp GEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred hCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhh
Confidence 5664 6779999999999999999999999999998899999999999876654
No 41
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.92 E-value=2.7e-09 Score=63.52 Aligned_cols=53 Identities=15% Similarity=0.414 Sum_probs=48.0
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 68 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 68 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhc
Confidence 57788889999999999999999999999999998899999999999976543
No 42
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.91 E-value=3.2e-09 Score=62.85 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=47.6
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~~~ 54 (84)
++|++ .+.++++++++.++++.|.+++.+.+||+|++ |+++|+++..++.....
T Consensus 10 ~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 66 (130)
T 3i8n_A 10 QVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQ 66 (130)
T ss_dssp TTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHH
T ss_pred hCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHh
Confidence 57885 44589999999999999999999999999987 89999999999987653
No 43
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.91 E-value=2.1e-09 Score=65.74 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=51.3
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCC---cEEEEEEHHHHHHHHHhhhhh
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDG---GVAACLDVLQITHAAISMCYE 59 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g---~l~Giv~~~~i~~~~~~~~~~ 59 (84)
++|++ ++.++++++++.++++.|.+++.+.+||+|++| +++|+|+..+++.........
T Consensus 85 ~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 85 IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSEN 148 (159)
T ss_dssp GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHTT
T ss_pred HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhhc
Confidence 46776 788999999999999999999999999999888 999999999998877654443
No 44
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.91 E-value=1.7e-09 Score=70.81 Aligned_cols=53 Identities=21% Similarity=0.236 Sum_probs=48.5
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.++++.|.+++++++||+|++|+++|+|+..|++...
T Consensus 225 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~ 277 (282)
T 2yzq_A 225 EIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVL 277 (282)
T ss_dssp GTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGG
T ss_pred HhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHH
Confidence 47888999999999999999999999999999999878999999999987543
No 45
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.90 E-value=3e-09 Score=65.19 Aligned_cols=54 Identities=19% Similarity=0.239 Sum_probs=48.6
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
+|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+|+..+++......
T Consensus 83 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~ 136 (160)
T 2o16_A 83 VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINL 136 (160)
T ss_dssp HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHH
T ss_pred HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 57788889999999999999999999999999997 9999999999998765543
No 46
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.90 E-value=2.9e-09 Score=64.68 Aligned_cols=54 Identities=9% Similarity=0.151 Sum_probs=47.8
Q ss_pred CCCC--CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMT--SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~--~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|+ +++.++++++++.++.+.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 19 dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 19 TFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp GGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred HHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHH
Confidence 4677 57789999999999999999999999999998899999999999977654
No 47
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.90 E-value=3.4e-09 Score=64.20 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=48.0
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++ ++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++....
T Consensus 15 ~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 69 (157)
T 2emq_A 15 PFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAI 69 (157)
T ss_dssp TTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHS
T ss_pred hhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 46776 788999999999999999999999999999889999999999997654
No 48
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.90 E-value=2.5e-09 Score=65.41 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=43.9
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQIT 50 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~ 50 (84)
+|.+ +.++++++++.++++.|.+++.+.+||+|++|+++|+++..|++
T Consensus 108 im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 108 ILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp HCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred HcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 4655 78999999999999999999999999999999999999999874
No 49
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.90 E-value=3.9e-09 Score=61.55 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=47.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.++++.|.+++.+.+||+| +|+++|+++..++....
T Consensus 5 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~ 56 (125)
T 1pbj_A 5 DVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAI 56 (125)
T ss_dssp HHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred HhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHH
Confidence 36888889999999999999999999999999999 89999999999987654
No 50
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.90 E-value=5.2e-09 Score=64.93 Aligned_cols=54 Identities=13% Similarity=0.195 Sum_probs=48.9
Q ss_pred CCCC--CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHHHH
Q 047148 1 MVMT--SSPECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~--~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~~~ 54 (84)
++|+ +++.++++++++.++++.|.+++++.+||+|++ |+++|+++..++.....
T Consensus 46 diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~ 102 (172)
T 3lhh_A 46 SLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESI 102 (172)
T ss_dssp TTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred HhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHh
Confidence 5788 567899999999999999999999999999987 89999999999987654
No 51
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.89 E-value=4.7e-09 Score=63.79 Aligned_cols=53 Identities=11% Similarity=0.212 Sum_probs=48.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC--CCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDK--DGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~--~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.++++.|.+++.+.+||+|+ +|+++|+++..++....
T Consensus 17 dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~ 71 (164)
T 2pfi_A 17 HFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQAL 71 (164)
T ss_dssp HHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHH
T ss_pred HHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHH
Confidence 368888899999999999999999999999999996 79999999999987655
No 52
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.89 E-value=3.7e-09 Score=64.97 Aligned_cols=55 Identities=25% Similarity=0.412 Sum_probs=49.7
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+|+..+++......
T Consensus 97 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 97 VAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp GTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 468888899999999999999999999999999998 9999999999998876543
No 53
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.89 E-value=2.5e-09 Score=62.37 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=46.7
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+++..++....
T Consensus 70 ~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 70 VMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAK 120 (125)
T ss_dssp HCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHH
T ss_pred HcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 57788889999999999999999999999999997 9999999999987654
No 54
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.88 E-value=3.4e-09 Score=64.33 Aligned_cols=57 Identities=21% Similarity=0.303 Sum_probs=49.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCYE 59 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~~ 59 (84)
++|++++.++++++++.++++.|.+++ ++||+|++|+++|+++..+++.........
T Consensus 90 ~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 90 HMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp GGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC
T ss_pred HhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 468888899999999999999998875 699999889999999999998877655443
No 55
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.88 E-value=6e-09 Score=63.09 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=49.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCY 58 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~ 58 (84)
++|.+++.++++++++.++++.|.+++. +||+|++|+++|+|+..+++........
T Consensus 87 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 87 EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTC
T ss_pred HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhh
Confidence 4688888999999999999999999876 9999988999999999999877655433
No 56
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.88 E-value=4.1e-09 Score=70.13 Aligned_cols=55 Identities=20% Similarity=0.308 Sum_probs=49.3
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++.....
T Consensus 203 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 203 EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred HHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 4788889999999999999999999999999999989999999999999876543
No 57
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.88 E-value=3.7e-09 Score=63.35 Aligned_cols=51 Identities=22% Similarity=0.309 Sum_probs=46.8
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
++|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++..
T Consensus 9 ~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~ 61 (152)
T 4gqw_A 9 EFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61 (152)
T ss_dssp GTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTT
T ss_pred hccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHH
Confidence 47877 7889999999999999999999999999998899999999999864
No 58
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.88 E-value=6.6e-09 Score=61.34 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=48.1
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|++++.+++++.++.++++.|.+++.+.+||+| +|+++|+++..++.....
T Consensus 8 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~ 60 (133)
T 2ef7_A 8 EYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIG 60 (133)
T ss_dssp GTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred HhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHh
Confidence 47888889999999999999999999999999999 899999999999976543
No 59
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.88 E-value=3e-09 Score=64.65 Aligned_cols=55 Identities=18% Similarity=0.369 Sum_probs=49.7
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
+|++++.++++++++.++++.|.+++.+++||+| +|+++|+++..+++.......
T Consensus 83 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 83 IMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp HSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 5778888999999999999999999999999999 799999999999988775443
No 60
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.87 E-value=4.2e-09 Score=62.57 Aligned_cols=55 Identities=18% Similarity=0.332 Sum_probs=49.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
++|.+++.++++++++.++++.|.+++.+++ |+|++|+++|+++..+++......
T Consensus 76 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 76 RIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp GTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred HHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 4688888999999999999999999999999 999889999999999998776543
No 61
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.87 E-value=1.5e-09 Score=64.11 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=46.5
Q ss_pred CCCCCC--CeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHH
Q 047148 1 MVMTSS--PECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~--~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~ 52 (84)
++|+++ +.++++++++.++++.|.+++.+.+||+|++ |+++|+++..++...
T Consensus 7 diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~ 61 (127)
T 3nqr_A 7 DIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPF 61 (127)
T ss_dssp HHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGG
T ss_pred HhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 368754 8899999999999999999999999999987 899999999998754
No 62
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.87 E-value=6.2e-09 Score=63.60 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=47.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++ +.++++++++.+|++.|.+++.+.+||+|++|+++|+++..++....
T Consensus 21 ~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 21 DFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp GSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred HHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHh
Confidence 47876 56999999999999999999999999999889999999999998764
No 63
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.87 E-value=2e-09 Score=63.82 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=46.7
Q ss_pred CCCC--CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHHH
Q 047148 1 MVMT--SSPECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~--~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~~ 53 (84)
++|+ +++.+++++.++.++++.|.+++.+++||+|++ |+++|+++..+++...
T Consensus 9 diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~ 64 (129)
T 3jtf_A 9 DIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYM 64 (129)
T ss_dssp HHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGG
T ss_pred HhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHh
Confidence 3677 566899999999999999999999999999985 8999999999987653
No 64
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.87 E-value=3.4e-09 Score=64.30 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=45.3
Q ss_pred CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 5 SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 5 ~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++...
T Consensus 101 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 101 EGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp HTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 6778999999999999999999999999999889999999999987654
No 65
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.87 E-value=3.3e-09 Score=62.92 Aligned_cols=50 Identities=12% Similarity=0.201 Sum_probs=45.7
Q ss_pred CCC---CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 2 VMT---SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 2 vm~---~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
+|+ +++.+++++.++.++++.|.+++.+.+||+| +|+++|+++..++...
T Consensus 11 im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~ 63 (135)
T 2rc3_A 11 LLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRK 63 (135)
T ss_dssp HHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred HHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHH
Confidence 566 7888999999999999999999999999999 8999999999999753
No 66
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.87 E-value=4.8e-09 Score=65.58 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=48.1
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++...
T Consensus 79 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 79 LVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTS
T ss_pred HHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 46888889999999999999999999999999999889999999999986544
No 67
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.87 E-value=3.2e-09 Score=62.74 Aligned_cols=51 Identities=16% Similarity=0.257 Sum_probs=46.4
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+++..+++...
T Consensus 79 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 79 LARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp HHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred HhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 57788889999999999999999999999999997 9999999999987643
No 68
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.86 E-value=2.5e-09 Score=64.50 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=47.2
Q ss_pred CCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 2 VMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 2 vm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++....
T Consensus 20 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 73 (150)
T 3lqn_A 20 LMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGI 73 (150)
T ss_dssp HSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHT
T ss_pred cccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHH
Confidence 5773 578999999999999999999999999999899999999999998765
No 69
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.86 E-value=2.9e-09 Score=64.95 Aligned_cols=52 Identities=13% Similarity=0.224 Sum_probs=47.4
Q ss_pred CCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 2 VMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 2 vm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++....
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~ 72 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSI 72 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHh
Confidence 5766 788999999999999999999999999999889999999999997764
No 70
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.86 E-value=4.7e-09 Score=70.33 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=50.0
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
+|++++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++......
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 6888889999999999999999999999999999999999999999988765443
No 71
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.86 E-value=5.8e-09 Score=64.61 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=49.8
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+|+..+++.......
T Consensus 112 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~~ 167 (185)
T 2j9l_A 112 NILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQMA 167 (185)
T ss_dssp GGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHC
T ss_pred HhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHhh
Confidence 35778889999999999999999999999999999 899999999999988765443
No 72
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.85 E-value=6.1e-09 Score=65.13 Aligned_cols=54 Identities=13% Similarity=0.131 Sum_probs=48.8
Q ss_pred CCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 3 MTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 3 m~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++......
T Consensus 105 ~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 105 RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 456778999999999999999999999999999899999999999998877654
No 73
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.85 E-value=5.2e-09 Score=69.26 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=51.1
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
+|++++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..+++.......
T Consensus 232 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 232 VMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp HSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 57888899999999999999999999999999998999999999999988776543
No 74
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.84 E-value=2.9e-09 Score=63.38 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=43.8
Q ss_pred CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 6 SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 6 ~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++....
T Consensus 92 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 92 GVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp --CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 5679999999999999999999999999998899999999999987654
No 75
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.84 E-value=1.4e-08 Score=61.85 Aligned_cols=52 Identities=10% Similarity=0.227 Sum_probs=48.1
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCE-eEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLH-LPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~-ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.+|++.|.+++.+. +||+|++ +++|+++..++....
T Consensus 20 ~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~ 72 (157)
T 1o50_A 20 KLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVS 72 (157)
T ss_dssp TSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHH
T ss_pred hcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHH
Confidence 589999999999999999999999999999 9999977 999999999997754
No 76
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.84 E-value=4.7e-09 Score=62.40 Aligned_cols=54 Identities=6% Similarity=-0.021 Sum_probs=46.9
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC-CCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDK-DGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~-~g~l~Giv~~~~i~~~~~ 54 (84)
++|++ ++.++++++++.+|++.|.+++.+.+||+++ +|+++|+++..+++....
T Consensus 6 ~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~ 62 (130)
T 3hf7_A 6 DIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMT 62 (130)
T ss_dssp HHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHT
T ss_pred HhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 36764 5789999999999999999999999999975 589999999999987653
No 77
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.83 E-value=2.9e-09 Score=63.67 Aligned_cols=53 Identities=19% Similarity=0.129 Sum_probs=47.0
Q ss_pred CCCC--CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHHH
Q 047148 1 MVMT--SSPECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~--~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~~ 53 (84)
++|+ +++.+++++.++.+|++.|.+++++.+||+|++ |+++|+++..+++...
T Consensus 7 ~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~ 62 (136)
T 3lfr_A 7 DIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLI 62 (136)
T ss_dssp HHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGG
T ss_pred hccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHH
Confidence 3687 467899999999999999999999999999987 7999999999987653
No 78
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.82 E-value=1.7e-08 Score=63.04 Aligned_cols=54 Identities=11% Similarity=0.117 Sum_probs=47.8
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC-CcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKD-GGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~-g~l~Giv~~~~i~~~~~ 54 (84)
++|++ ++.+++++.++.++++.|.+++++.+||+|++ |+++|+++..+++....
T Consensus 40 diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~ 96 (173)
T 3ocm_A 40 SIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI 96 (173)
T ss_dssp TTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred HhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh
Confidence 57874 57789999999999999999999999999976 89999999999987653
No 79
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.81 E-value=2.8e-09 Score=65.66 Aligned_cols=51 Identities=24% Similarity=0.305 Sum_probs=46.5
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
++|++ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+++..++..
T Consensus 8 dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 8 DFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLA 60 (180)
T ss_dssp HHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTC
T ss_pred HhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHh
Confidence 35777 7889999999999999999999999999999999999999999863
No 80
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.81 E-value=8.1e-09 Score=62.74 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=45.2
Q ss_pred CeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 7 PECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 7 ~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
+.++++++++.++++.|.+++.+.+||+| +|+++|+++..+++.......
T Consensus 100 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 100 TLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred ceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 67899999999999999999999999999 799999999999987765543
No 81
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.80 E-value=9e-09 Score=68.84 Aligned_cols=52 Identities=15% Similarity=0.402 Sum_probs=47.9
Q ss_pred CCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 3 MTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 3 m~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
|++++.++++++++.++++.|.+++++++||+|++|+++|+++..+++....
T Consensus 196 m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 196 TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp BCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHH
T ss_pred CCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHh
Confidence 7788899999999999999999999999999998999999999999877654
No 82
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.80 E-value=9.1e-09 Score=62.69 Aligned_cols=55 Identities=9% Similarity=0.090 Sum_probs=47.5
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhhh
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMCY 58 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~~ 58 (84)
+|.+++.++.+++++.++++.|.+++. +||+|++|+++|+|+..+++........
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~ 145 (159)
T 1yav_A 91 VMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIR 145 (159)
T ss_dssp HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHH
Confidence 577888999999999999999998876 9999988999999999999877655443
No 83
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.80 E-value=5.3e-09 Score=63.89 Aligned_cols=52 Identities=17% Similarity=0.157 Sum_probs=46.7
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCC-cEEEEEEHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDG-GVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g-~l~Giv~~~~i~~~ 52 (84)
++|++ ++.++++++++.++++.|.+++++.+||+|+++ +++|+++..++...
T Consensus 42 diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 96 (156)
T 3oi8_A 42 DAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKY 96 (156)
T ss_dssp GTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGG
T ss_pred heeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 47876 678999999999999999999999999999874 99999999998765
No 84
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.79 E-value=5.6e-09 Score=63.46 Aligned_cols=54 Identities=24% Similarity=0.313 Sum_probs=47.2
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEE-cC-CCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVI-DK-DGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVv-d~-~g~l~Giv~~~~i~~~~~ 54 (84)
++|++ ++.+++++.++.+|++.|.+++.+.+||+ |+ +|+++|+++..++.....
T Consensus 24 ~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 24 DVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp HHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred eEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 36775 78899999999999999999999999999 64 489999999999987643
No 85
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.78 E-value=1.7e-08 Score=65.83 Aligned_cols=53 Identities=23% Similarity=0.324 Sum_probs=48.5
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC-CCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDK-DGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~-~g~l~Giv~~~~i~~~~ 53 (84)
.+|++++.++++++++.+|++.|.+++++++||+|+ +|+++|+++..++....
T Consensus 8 ~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~ 61 (280)
T 3kh5_A 8 IAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFM 61 (280)
T ss_dssp TSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHT
T ss_pred HhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHh
Confidence 367888999999999999999999999999999997 79999999999998754
No 86
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.78 E-value=2.7e-08 Score=64.84 Aligned_cols=55 Identities=9% Similarity=0.162 Sum_probs=50.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++......
T Consensus 88 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 88 EIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLD 142 (280)
T ss_dssp GTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGG
T ss_pred HhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhh
Confidence 4788888999999999999999999999999999999999999999999876543
No 87
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.77 E-value=1.9e-08 Score=71.78 Aligned_cols=55 Identities=20% Similarity=0.308 Sum_probs=50.2
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+|+..|+......
T Consensus 223 dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 223 EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp GTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 4788889999999999999999999999999999999999999999998776543
No 88
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.77 E-value=2.5e-08 Score=60.40 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=45.3
Q ss_pred CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 5 SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 5 ~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+++.++++++++.+|++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~ 78 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAA 78 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhc
Confidence 56778999999999999999999999999998899999999999977543
No 89
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.77 E-value=1.6e-08 Score=67.62 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=45.8
Q ss_pred CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 6 SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 6 ~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++.++++++++.++++.|.+++++++||+|++|+++|+|+..|++....
T Consensus 271 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~ 319 (323)
T 3t4n_C 271 GVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 319 (323)
T ss_dssp CCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 6789999999999999999999999999998899999999999987764
No 90
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.75 E-value=1.6e-08 Score=62.59 Aligned_cols=54 Identities=13% Similarity=0.122 Sum_probs=47.6
Q ss_pred CCCCCC----Ceee--eCCCCHHHHHHHHHhCCCCEeEEE--cCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSS----PECA--TMETTILDALHIMHDGKFLHLPVI--DKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~----~~~v--~~~~~l~~a~~~m~~~~~~~ipVv--d~~g~l~Giv~~~~i~~~~~ 54 (84)
++|+++ +.++ +++.++.+|++.|.+++.+.+||+ |++|+++|+|+..++.....
T Consensus 15 dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~ 76 (185)
T 2j9l_A 15 DVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIE 76 (185)
T ss_dssp HHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred HHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHH
Confidence 357765 6788 999999999999999999999999 78899999999999977654
No 91
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.74 E-value=1.8e-08 Score=66.85 Aligned_cols=52 Identities=13% Similarity=0.050 Sum_probs=48.2
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+|.+.|+++.+++++.++..+|...+++++||++ +|+++|||++.|++++..
T Consensus 194 ~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 194 RIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 4788999999999999999999999999999998 699999999999987764
No 92
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.74 E-value=2.9e-08 Score=63.69 Aligned_cols=52 Identities=10% Similarity=-0.013 Sum_probs=47.6
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhC---CCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDG---KFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~---~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
++|++++.+++++.++.++++.|.++ +++.+||+|++|+++|+++..+++..
T Consensus 58 ~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 58 RYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH 112 (205)
T ss_dssp GGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS
T ss_pred hhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC
Confidence 47999999999999999999999886 78999999999999999999998653
No 93
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.72 E-value=1.1e-08 Score=61.88 Aligned_cols=48 Identities=23% Similarity=0.248 Sum_probs=44.0
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQIT 50 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~ 50 (84)
+|++++.++++++++.++++.|.+++.+.+||+|++ +++|+|+..+++
T Consensus 100 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil 147 (149)
T 3k2v_A 100 VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLL 147 (149)
T ss_dssp HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHT
T ss_pred HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhh
Confidence 577788899999999999999999999999999965 999999999875
No 94
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.72 E-value=2.1e-08 Score=73.75 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=47.9
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.++.+.|.+++++++||+ ++|+++|+|+..|+.+..
T Consensus 572 ~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 572 VPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGY 623 (632)
T ss_dssp CSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECC
T ss_pred hhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHH
Confidence 4799999999999999999999999999999999 589999999999986554
No 95
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.72 E-value=3.3e-08 Score=66.32 Aligned_cols=54 Identities=13% Similarity=0.139 Sum_probs=48.9
Q ss_pred CCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhh
Q 047148 3 MTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISM 56 (84)
Q Consensus 3 m~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~ 56 (84)
|++++.++++++++.++++.|.+++++++||+|++|+++|+|+..+++......
T Consensus 271 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 271 YFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp CCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred ccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 467888999999999999999999999999999889999999999998776543
No 96
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.69 E-value=3.5e-08 Score=63.34 Aligned_cols=52 Identities=15% Similarity=0.135 Sum_probs=47.5
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
++|.+++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++...
T Consensus 17 ~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~ 68 (213)
T 1vr9_A 17 KWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL 68 (213)
T ss_dssp GGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS
T ss_pred HhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh
Confidence 3688899999999999999999999999999999988999999999998643
No 97
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.67 E-value=4.6e-08 Score=65.65 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=47.6
Q ss_pred CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHhhh
Q 047148 5 SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 5 ~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~~~ 57 (84)
+++.++++++++.++++.|.+++++++||+|++|+++|+|+..+++.......
T Consensus 265 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 265 DGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp CCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred CCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 37789999999999999999999999999998899999999999987765443
No 98
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.67 E-value=4.6e-08 Score=64.64 Aligned_cols=53 Identities=25% Similarity=0.345 Sum_probs=48.9
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+|++++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++....
T Consensus 161 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 161 FMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 57788899999999999999999999999999998999999999999977665
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.65 E-value=4.8e-08 Score=70.31 Aligned_cols=55 Identities=22% Similarity=0.359 Sum_probs=50.3
Q ss_pred CCCCCCCeeeeCC-CCHHHHHHHHHhCCCCEeEEEc-CCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSSPECATME-TTILDALHIMHDGKFLHLPVID-KDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~~~~v~~~-~~l~~a~~~m~~~~~~~ipVvd-~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|++++.++.++ +++.++++.|.+++++++||+| ++|+++|+|+..|++.....
T Consensus 388 diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~ 444 (527)
T 3pc3_A 388 ELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVS 444 (527)
T ss_dssp GGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHH
T ss_pred HhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHh
Confidence 5799999999999 9999999999999999999999 78999999999999876644
No 100
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.64 E-value=6e-08 Score=65.07 Aligned_cols=53 Identities=17% Similarity=0.372 Sum_probs=48.3
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
+|++++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 190 ~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 242 (334)
T 2qrd_G 190 GTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQ 242 (334)
T ss_dssp SBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHT
T ss_pred cccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhh
Confidence 57888899999999999999999999999999998899999999999977643
No 101
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.63 E-value=1.2e-07 Score=61.96 Aligned_cols=51 Identities=20% Similarity=0.271 Sum_probs=47.3
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
++|.+++.+++++.++.++++.|.+++.+.+||+|++|+++|+++..++..
T Consensus 64 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~ 114 (282)
T 2yzq_A 64 MLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIR 114 (282)
T ss_dssp CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred HHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 468888889999999999999999999999999998899999999999987
No 102
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.61 E-value=3.1e-08 Score=60.10 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=42.8
Q ss_pred CCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 5 SSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 5 ~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
+++.++++++++.+|++.|.+++.+.+||.+ +|+++|+++..++....
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~ 68 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKV 68 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHS
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHH
Confidence 4458999999999999999999999999965 89999999999997764
No 103
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.58 E-value=6.3e-08 Score=64.84 Aligned_cols=52 Identities=12% Similarity=0.241 Sum_probs=47.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhC-----CCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDG-----KFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~-----~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
++|++++.+++++.++.++++.|.++ +++++||+|++|+++|+|+..+++..
T Consensus 141 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 141 AIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN 197 (286)
T ss_dssp HHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS
T ss_pred HhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC
Confidence 36888999999999999999999886 78889999988999999999998654
No 104
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.57 E-value=1.4e-07 Score=63.28 Aligned_cols=54 Identities=22% Similarity=0.261 Sum_probs=48.9
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC-CCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDK-DGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~-~g~l~Giv~~~~i~~~~~ 54 (84)
++|++++.+++++.++.++++.|.+++.+.+||+|+ +|+++|+++..+++....
T Consensus 122 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~ 176 (330)
T 2v8q_E 122 QDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLK 176 (330)
T ss_dssp SSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHH
T ss_pred hcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHH
Confidence 468888999999999999999999999999999998 799999999999877653
No 105
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.57 E-value=1.5e-07 Score=62.51 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=47.3
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhC-----CCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDG-----KFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~-----~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
++|++++.+++++.++.++++.|.++ ++..+||+|++|+++|+++..+++..
T Consensus 139 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 139 GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp GTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS
T ss_pred hhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC
Confidence 47999999999999999999999876 78999999988999999999998754
No 106
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.51 E-value=1.7e-07 Score=67.66 Aligned_cols=54 Identities=26% Similarity=0.338 Sum_probs=49.6
Q ss_pred CCCC-CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 2 VMTS-SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 2 vm~~-~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
+|++ ++.+++++.++.++++.|.+++++.+||+|++|+++|+++..|++.....
T Consensus 180 vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 180 VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 5776 88899999999999999999999999999999999999999999877644
No 107
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.49 E-value=5.6e-07 Score=64.09 Aligned_cols=54 Identities=24% Similarity=0.359 Sum_probs=49.6
Q ss_pred CCCCC-CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS-SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~-~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..++.....
T Consensus 156 ~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 156 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp TSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 46877 7889999999999999999999999999999999999999999987765
No 108
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.44 E-value=2.9e-07 Score=66.19 Aligned_cols=50 Identities=18% Similarity=0.317 Sum_probs=45.6
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQIT 50 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~ 50 (84)
++|++++.++++++++.++++.|.+++++.+||+|++++++|+|+.+|+.
T Consensus 93 ~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 93 AGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR 142 (496)
T ss_dssp C--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT
T ss_pred cccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh
Confidence 36888999999999999999999999999999999889999999999986
No 109
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.35 E-value=5.4e-08 Score=69.97 Aligned_cols=55 Identities=22% Similarity=0.238 Sum_probs=0.0
Q ss_pred CCCCCC--CeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHHh
Q 047148 1 MVMTSS--PECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAIS 55 (84)
Q Consensus 1 dvm~~~--~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~~ 55 (84)
++|+++ +.++++++++.++++.|.+++++.+||+|++|+++|+|+..|++.....
T Consensus 165 diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 165 DMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp ---------------------------------------------------------
T ss_pred HHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 468776 8899999999999999999999999999999999999999999876643
No 110
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.33 E-value=1.7e-07 Score=68.93 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=47.9
Q ss_pred CCCC--CCCeeeeCCCCHHHHHHHHH-hCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMT--SSPECATMETTILDALHIMH-DGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~--~~~~~v~~~~~l~~a~~~m~-~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
|+|+ +++.++++++++.++.+.|. +++.+.+||+|++|+++|+++..|+....
T Consensus 457 diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l 512 (632)
T 3org_A 457 EIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRL 512 (632)
T ss_dssp HHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTT
T ss_pred HHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHH
Confidence 4688 78889999999999999999 79999999999889999999999987543
No 111
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.29 E-value=1e-06 Score=62.91 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=46.9
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhC-----CCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDG-----KFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~-----~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
++|++++.++++++++.++++.|.++ ++..+||+|++++++|+++.++++..
T Consensus 159 ~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 159 GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 215 (473)
T ss_dssp TTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS
T ss_pred HhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC
Confidence 57999999999999999999999875 57899999988999999999999764
No 112
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.28 E-value=2.4e-06 Score=60.88 Aligned_cols=51 Identities=12% Similarity=0.186 Sum_probs=47.6
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEc--CCCcEEEEEEHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVID--KDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd--~~g~l~Giv~~~~i~~ 51 (84)
++|++++.+++++.++.++++.|.+++.+.+||+| ++++++|+|+..|+..
T Consensus 94 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 94 NGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp TTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred hcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 47889999999999999999999999999999999 7899999999999875
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.27 E-value=1.4e-06 Score=62.86 Aligned_cols=50 Identities=20% Similarity=0.292 Sum_probs=46.4
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC--CCcEEEEEEHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDK--DGGVAACLDVLQITH 51 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~--~g~l~Giv~~~~i~~ 51 (84)
.|.+++.++++++++.++++.|.+++++.+||+|+ +++++|+|+.+|+..
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 57788899999999999999999999999999998 899999999999863
No 114
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.24 E-value=1.4e-07 Score=67.81 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=0.0
Q ss_pred CCCC-C-CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMT-S-SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~-~-~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|+ + ++.+++++.++.++++.|.+++++.+||+|++|+++|+|+..|++...
T Consensus 151 ~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 151 AIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -------------------------------------------------------
T ss_pred HHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 4677 3 688999999999999999999999999999999999999999987764
No 115
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.23 E-value=1.5e-07 Score=67.23 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=4.2
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|++ ++.++++++++.++++.|.+++++.+||+|++|+++|+++..+++....
T Consensus 159 ~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 159 DLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------CHHHHT
T ss_pred HHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 46777 8889999999999999999999999999999999999999999887754
No 116
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.22 E-value=1.6e-07 Score=68.33 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=0.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
++|+++.++++++.++++|.++|.++++..+||+|++|+|+|+|+..|+.+...
T Consensus 204 evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 204 SVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ------------------------------------------------------
T ss_pred hhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 579999899999999999999999999999999999999999999999976653
No 117
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.18 E-value=2.1e-07 Score=66.49 Aligned_cols=51 Identities=24% Similarity=0.350 Sum_probs=0.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
++|++++.++++++++.++++.|.+++++.+||+|++|+++|+|+..|+..
T Consensus 99 ~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 99 NGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF 149 (494)
T ss_dssp ---------------------------------------------------
T ss_pred hcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh
Confidence 468888999999999999999999999999999998899999999998864
No 118
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.15 E-value=2.3e-06 Score=61.56 Aligned_cols=55 Identities=7% Similarity=-0.019 Sum_probs=47.1
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC----CcEEEEEEHHHHHHHHHhhh
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKD----GGVAACLDVLQITHAAISMC 57 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~----g~l~Giv~~~~i~~~~~~~~ 57 (84)
++|++++.++++++++.+++++|.++++ +||+|++ |+++|+|+..|++.......
T Consensus 455 ~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 455 KALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp GGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred HHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 4788899999999999999999977654 7999974 89999999999988875543
No 119
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.15 E-value=2.7e-07 Score=65.94 Aligned_cols=53 Identities=21% Similarity=0.337 Sum_probs=0.0
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+++..|+....
T Consensus 154 ~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 154 ELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -----------------------------------------------------
T ss_pred HHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 46777788999999999999999999999999999999999999999987764
No 120
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.11 E-value=4.1e-07 Score=65.40 Aligned_cols=49 Identities=16% Similarity=0.136 Sum_probs=0.0
Q ss_pred CCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCC---CcEEEEEEHHHHHH
Q 047148 3 MTSSPECATMETTILDALHIMHDGKFLHLPVIDKD---GGVAACLDVLQITH 51 (84)
Q Consensus 3 m~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~---g~l~Giv~~~~i~~ 51 (84)
|++++.++++++++.++++.|.+++++.+||+|++ |+++|+|+..|++.
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~ 154 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPI 154 (503)
T ss_dssp ----------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHh
Confidence 88889999999999999999999999999999986 89999999999874
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.10 E-value=2.3e-07 Score=66.77 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=36.7
Q ss_pred CCCC-C-CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHHH
Q 047148 1 MVMT-S-SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHAA 53 (84)
Q Consensus 1 dvm~-~-~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~~ 53 (84)
++|+ + ++.+++++.++.++++.|.+++++.+||+|++|+++|+|+..|++...
T Consensus 153 diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 153 AVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp GTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred HHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 4677 3 578999999999999999999999999999999999999999987654
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.99 E-value=8.8e-07 Score=63.60 Aligned_cols=49 Identities=18% Similarity=0.369 Sum_probs=0.4
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQIT 50 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~ 50 (84)
++|.+++.+++++.++.++++.|.+++++.+||+| +++++|+|+.+|+.
T Consensus 92 ~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~ 140 (490)
T 4avf_A 92 TAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLR 140 (490)
T ss_dssp C-------------------------------------------------
T ss_pred cCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhh
Confidence 46888899999999999999999999999999999 89999999998885
No 123
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.96 E-value=3.5e-07 Score=65.72 Aligned_cols=52 Identities=21% Similarity=0.249 Sum_probs=40.0
Q ss_pred CCCCC--CCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHHH
Q 047148 1 MVMTS--SPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHA 52 (84)
Q Consensus 1 dvm~~--~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~~ 52 (84)
++|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+++..+++..
T Consensus 177 ~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 177 EVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKN 230 (514)
T ss_dssp ----CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSC
T ss_pred HHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHH
Confidence 46877 88999999999999999999999999999999999999987776543
No 124
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.88 E-value=1.3e-06 Score=62.71 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=24.9
Q ss_pred CCCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC---CCcEEEEEEHHHHHH
Q 047148 1 MVMTSSPECATMETTILDALHIMHDGKFLHLPVIDK---DGGVAACLDVLQITH 51 (84)
Q Consensus 1 dvm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~---~g~l~Giv~~~~i~~ 51 (84)
++|.+++.+++++.++.++++.|.+++++.+||+|+ +|+++|+|+..++..
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~ 165 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDF 165 (514)
T ss_dssp TTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-
T ss_pred hccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHh
Confidence 468888899999999999999999999999999997 589999999888754
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.59 E-value=9.2e-06 Score=59.24 Aligned_cols=49 Identities=18% Similarity=0.323 Sum_probs=0.0
Q ss_pred CCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcC---CCcEEEEEEHHHHHH
Q 047148 3 MTSSPECATMETTILDALHIMHDGKFLHLPVIDK---DGGVAACLDVLQITH 51 (84)
Q Consensus 3 m~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~---~g~l~Giv~~~~i~~ 51 (84)
|..+|++++|+.++.++.++|.++++..+||+|+ +++|+||++-+|+..
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf 195 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF 195 (556)
T ss_dssp ----------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc
Confidence 5567899999999999999999999999999986 579999998888754
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.49 E-value=1.5e-05 Score=56.94 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=0.0
Q ss_pred CCCCCCeeeeCCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 2 VMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 2 vm~~~~~~v~~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
+|..++.+++++.++.++++.|.+++...+||+|+ ++++|+++.+++..
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~ 146 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA 146 (486)
T ss_dssp --------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc
Confidence 57788889999999999999999999999999997 99999999988764
No 127
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=78.39 E-value=4.8 Score=21.97 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=22.1
Q ss_pred CCEeEEEcCCCcEEEEEEHHHHHHHHH
Q 047148 28 FLHLPVIDKDGGVAACLDVLQITHAAI 54 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~~~i~~~~~ 54 (84)
.+.+=++|++|.-+|+++..+++....
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~ 39 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAA 39 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHH
Confidence 455778999999999999999876543
No 128
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=71.08 E-value=2.7 Score=24.59 Aligned_cols=18 Identities=11% Similarity=0.207 Sum_probs=14.0
Q ss_pred eEEEcCCCcEEEEEEHHH
Q 047148 31 LPVIDKDGGVAACLDVLQ 48 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~~~ 48 (84)
.||.|++|+++|++...-
T Consensus 111 ~PV~~~~g~viGvv~vg~ 128 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIGL 128 (142)
T ss_dssp EEEECTTSCEEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEeE
Confidence 589887799999994443
No 129
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=63.84 E-value=4.4 Score=23.94 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=13.4
Q ss_pred CEeEEEcCCCcEEEEE
Q 047148 29 LHLPVIDKDGGVAACL 44 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv 44 (84)
+..||.|++|+++|.+
T Consensus 109 ~~~Pi~d~~G~~~G~v 124 (151)
T 2qkp_A 109 TYAAVRDQAGDFQGVL 124 (151)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 3578888889999988
No 130
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=62.15 E-value=6.7 Score=22.41 Aligned_cols=15 Identities=27% Similarity=0.463 Sum_probs=12.7
Q ss_pred eEEEcCCCcEEEEEE
Q 047148 31 LPVIDKDGGVAACLD 45 (84)
Q Consensus 31 ipVvd~~g~l~Giv~ 45 (84)
.||.|++|+++|++.
T Consensus 106 ~PV~~~~g~viGvv~ 120 (131)
T 1p0z_A 106 SPIQDATGKVIGIVS 120 (131)
T ss_dssp EEEECTTCCEEEEEE
T ss_pred EeEECCCCCEEEEEE
Confidence 589887899999984
No 131
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=60.16 E-value=6.1 Score=25.05 Aligned_cols=17 Identities=24% Similarity=0.356 Sum_probs=14.1
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
-=|++|.+|+++||++.
T Consensus 190 GGPLv~~~G~vVGI~s~ 206 (231)
T 3tjo_A 190 GGPLVNLDGEVIGINTL 206 (231)
T ss_dssp TSEEECTTSCEEEEEEE
T ss_pred hhHeecCCCeEEEEEeE
Confidence 34899988999999964
No 132
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=57.25 E-value=6.9 Score=23.77 Aligned_cols=20 Identities=30% Similarity=0.194 Sum_probs=15.8
Q ss_pred CCCCEeEEEcCCCcEEEEEE
Q 047148 26 GKFLHLPVIDKDGGVAACLD 45 (84)
Q Consensus 26 ~~~~~ipVvd~~g~l~Giv~ 45 (84)
.+-.-=|++|.+|+++||..
T Consensus 124 pGnSGGPl~n~~G~VVGI~~ 143 (163)
T 2w5e_A 124 DGMSGAPVCDKYCRVLAVHQ 143 (163)
T ss_dssp SCCTTCEEECTTSCEEEEEE
T ss_pred CCCchhhEEcCCCEEEEEEc
Confidence 34455699999999999984
No 133
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=56.84 E-value=6.5 Score=24.90 Aligned_cols=19 Identities=5% Similarity=-0.039 Sum_probs=14.8
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
-.-=|++|.+|+++||++.
T Consensus 175 ~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 175 NSGGALVNSLGELMGINTL 193 (237)
T ss_dssp CTTCEEECTTCCEEEEECC
T ss_pred CchHHeeCCCCeEEEEEee
Confidence 3445899989999999844
No 134
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=56.15 E-value=7.9 Score=24.40 Aligned_cols=19 Identities=26% Similarity=0.144 Sum_probs=14.7
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
-.-=|++|.+|+++||++.
T Consensus 182 dSGGPLv~~~G~vvGI~s~ 200 (237)
T 3k6y_A 182 DSGGPLIDLNGQVLGVVFG 200 (237)
T ss_dssp CTTCEEECTTSCEEEEEEE
T ss_pred ccHHHEECCCCEEEEEEEe
Confidence 3345899888999999954
No 135
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=54.13 E-value=8.8 Score=24.76 Aligned_cols=20 Identities=5% Similarity=-0.024 Sum_probs=15.3
Q ss_pred CCCEeEEEcCCCcEEEEEEH
Q 047148 27 KFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv~~ 46 (84)
+-.-=|++|.+|+++||.+.
T Consensus 185 G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 185 GNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTSEEECTTSCEEEEEEC
T ss_pred CcchhHeecCCCeEEEEEEe
Confidence 34445899989999999854
No 136
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=53.60 E-value=7.9 Score=23.92 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=14.1
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
.-=|+++.+|+++|+++.
T Consensus 158 SGGPlv~~~g~lvGI~s~ 175 (210)
T 2as9_A 158 SGSPVLNSNNEVIGVVYG 175 (210)
T ss_dssp TTCEEECTTSCEEEEECC
T ss_pred ccCcEECCCCeEEEEEec
Confidence 335888878999999954
No 137
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=52.58 E-value=10 Score=23.03 Aligned_cols=18 Identities=17% Similarity=0.154 Sum_probs=14.2
Q ss_pred EeEEEcCCCcEEEEEEHH
Q 047148 30 HLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~~ 47 (84)
-=|+++.+|+++|+++..
T Consensus 155 GGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 155 GSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TCEEECTTSCEEEEEEEE
T ss_pred cCeEECcCCEEEEEEecc
Confidence 348888789999999653
No 138
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=50.58 E-value=8.9 Score=24.80 Aligned_cols=23 Identities=17% Similarity=0.065 Sum_probs=16.8
Q ss_pred CCCCEeEEEcCCCcEEEEEEHHH
Q 047148 26 GKFLHLPVIDKDGGVAACLDVLQ 48 (84)
Q Consensus 26 ~~~~~ipVvd~~g~l~Giv~~~~ 48 (84)
.+-+-=||+|.+|+++|+-+..+
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC--
T ss_pred CCCCCCccCCCCCcEEEEEeccC
Confidence 34555699999999999985443
No 139
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=50.29 E-value=11 Score=22.65 Aligned_cols=17 Identities=12% Similarity=0.173 Sum_probs=13.7
Q ss_pred eEEEcCCCcEEEEEEHH
Q 047148 31 LPVIDKDGGVAACLDVL 47 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~~ 47 (84)
=|+++.+|+++|+++..
T Consensus 159 GPl~~~~g~lvGI~s~g 175 (204)
T 2vid_A 159 SPVLNSNNELVGIHFAS 175 (204)
T ss_dssp CEEECTTSCEEEEEEEE
T ss_pred CcEECCCCeEEEEEecC
Confidence 48888789999999643
No 140
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=48.89 E-value=12 Score=23.65 Aligned_cols=17 Identities=6% Similarity=0.010 Sum_probs=13.8
Q ss_pred eEEEcCCCcEEEEEEHH
Q 047148 31 LPVIDKDGGVAACLDVL 47 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~~ 47 (84)
=|+++.+|+++||++..
T Consensus 188 GPlv~~~g~lvGI~s~g 204 (246)
T 1qtf_A 188 SGIFNLKGELIGIHSGK 204 (246)
T ss_dssp CEEECTTCCEEEEEEEE
T ss_pred hheECCCCEEEEEEecc
Confidence 48888789999999653
No 141
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=46.83 E-value=25 Score=17.78 Aligned_cols=26 Identities=12% Similarity=-0.084 Sum_probs=22.3
Q ss_pred CCCCHHHHHHHHHhCCCCEeEEEcCC
Q 047148 12 METTILDALHIMHDGKFLHLPVIDKD 37 (84)
Q Consensus 12 ~~~~l~~a~~~m~~~~~~~ipVvd~~ 37 (84)
+-+|+++|+..|...+...+...|.+
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~ 36 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAE 36 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSS
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCC
Confidence 46789999999998888889888866
No 142
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=45.54 E-value=32 Score=17.94 Aligned_cols=33 Identities=9% Similarity=-0.073 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHHhCCCCEeEEEcCCCcEEEEE
Q 047148 12 METTILDALHIMHDGKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 12 ~~~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv 44 (84)
+-+|+++|+..|...+.+.+...|.+..-+.+|
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~nVV 43 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVV 43 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEE
Confidence 457899999999888888888888663334444
No 143
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=44.60 E-value=15 Score=23.01 Aligned_cols=16 Identities=6% Similarity=0.202 Sum_probs=13.2
Q ss_pred eEEEcCCCcEEEEEEH
Q 047148 31 LPVIDKDGGVAACLDV 46 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~ 46 (84)
=|+++.+|+++||++.
T Consensus 197 GPl~~~~g~lvGI~s~ 212 (242)
T 1agj_A 197 SGIFNSNGELVGIHSS 212 (242)
T ss_dssp CEEECTTSEEEEEEEE
T ss_pred hHhcccCCEEEEEEec
Confidence 4888878999999964
No 144
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=44.11 E-value=15 Score=24.45 Aligned_cols=15 Identities=27% Similarity=0.395 Sum_probs=13.0
Q ss_pred eEEEcCCCcEEEEEE
Q 047148 31 LPVIDKDGGVAACLD 45 (84)
Q Consensus 31 ipVvd~~g~l~Giv~ 45 (84)
=|++|.+|+++||++
T Consensus 174 GPlv~~~G~vvGI~s 188 (332)
T 3num_A 174 GPLVNLDGEVIGINT 188 (332)
T ss_dssp SEEEETTSCEEEEEE
T ss_pred HHhhCCCCcEEEEEe
Confidence 489998899999984
No 145
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=43.19 E-value=14 Score=23.64 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=14.0
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
-=|++|.+|+++||.+.
T Consensus 184 GGPLv~~~G~vvGI~s~ 200 (239)
T 1l1j_A 184 GGPLLNIHGEVIGINTA 200 (239)
T ss_dssp TSEEECSSSEEEEEECC
T ss_pred cHHhccCCCeEEEEEee
Confidence 35889888999999964
No 146
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=42.28 E-value=17 Score=24.21 Aligned_cols=17 Identities=24% Similarity=0.319 Sum_probs=13.8
Q ss_pred CEeEEEcCCCcEEEEEE
Q 047148 29 LHLPVIDKDGGVAACLD 45 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~ 45 (84)
.-=|++|.+|+++||.+
T Consensus 173 SGGPl~~~~G~vVGI~s 189 (325)
T 1lcy_A 173 AGGPLVNLDGEVIGVNT 189 (325)
T ss_dssp TTSEEEETTSCEEEEEE
T ss_pred ccccEECCCCEEEEEEe
Confidence 33589998899999984
No 147
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=42.25 E-value=17 Score=24.46 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=14.3
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
.-=|++|.+|+++||++.
T Consensus 180 SGGPLvn~~G~vvGI~s~ 197 (348)
T 3qo6_A 180 SGGPLLDSSGTLIGINTA 197 (348)
T ss_dssp TTCEEECTTSCEEEEEEE
T ss_pred cHHHhhCCCCeEEEEEEe
Confidence 345899988999999853
No 148
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=41.78 E-value=35 Score=17.85 Aligned_cols=26 Identities=12% Similarity=-0.086 Sum_probs=22.1
Q ss_pred CCCCHHHHHHHHHhCCCCEeEEEcCC
Q 047148 12 METTILDALHIMHDGKFLHLPVIDKD 37 (84)
Q Consensus 12 ~~~~l~~a~~~m~~~~~~~ipVvd~~ 37 (84)
+-+|+++|+..|...+.+.+...|.+
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~e 37 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSE 37 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETT
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCC
Confidence 45789999999998888889888866
No 149
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=41.77 E-value=20 Score=21.57 Aligned_cols=20 Identities=25% Similarity=0.456 Sum_probs=14.7
Q ss_pred EeEEEcCCCcEEEEE----EHHHH
Q 047148 30 HLPVIDKDGGVAACL----DVLQI 49 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv----~~~~i 49 (84)
..||.+.+|++.|++ ++..+
T Consensus 129 a~pi~~~~g~~~Gvl~~~i~l~~l 152 (217)
T 4dah_A 129 CVPVLDSKRNVTDYLVAAIQIDYL 152 (217)
T ss_dssp EEEEECTTSCEEEEEEEEEEHHHH
T ss_pred EEEEECCCCCEEEEEEEEEcHHHH
Confidence 357888789999998 55554
No 150
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=41.59 E-value=29 Score=20.88 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=23.2
Q ss_pred HHHHHHHHHhCCCCEeEEEcCCCcEEEEEEHHH
Q 047148 16 ILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQ 48 (84)
Q Consensus 16 l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~~~ 48 (84)
+.+..+.+.+.+...+.|-. +|+++|+|.+.|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD 152 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKD 152 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEec
Confidence 55566667777777776665 689999996655
No 151
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=41.42 E-value=18 Score=23.88 Aligned_cols=18 Identities=6% Similarity=0.015 Sum_probs=14.3
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
.-=|++|.+|+++||.+.
T Consensus 165 SGGPl~~~~G~vvGI~s~ 182 (318)
T 1te0_A 165 SGGALVNSLGELMGINTL 182 (318)
T ss_dssp TTSEEECTTCCEEEEEEC
T ss_pred CcCceECCCCeEEEEEee
Confidence 335899988999999853
No 152
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*
Probab=40.99 E-value=43 Score=18.70 Aligned_cols=22 Identities=9% Similarity=0.132 Sum_probs=14.9
Q ss_pred hCCCCEeEEEcCCCcEEEEEEH
Q 047148 25 DGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 25 ~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
+.....+.+.+++|+++|++..
T Consensus 43 ~~~~~~~~~~~~~~~~vG~~~~ 64 (160)
T 1qst_A 43 DRHHESMVILKNKQKVIGGICF 64 (160)
T ss_dssp SSSEEEEEEEETTTEEEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEEE
Confidence 3344456666767899999954
No 153
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=40.85 E-value=19 Score=21.76 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=13.2
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
-=|+.|..|++++|+
T Consensus 110 GrPi~Dn~GrVVaIV 124 (158)
T 4agk_A 110 GRPILDNSGKVVAIV 124 (158)
T ss_dssp TCEEECTTSCEEEEE
T ss_pred CCccccCCCCEEEEE
Confidence 358999999999998
No 154
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=39.64 E-value=43 Score=18.26 Aligned_cols=33 Identities=12% Similarity=0.009 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEH
Q 047148 14 TTILDALHIMHDGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 14 ~~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
.+.....+.+.+.....+.+.+++|+++|++..
T Consensus 40 ~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~ 72 (164)
T 4e0a_A 40 LNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVI 72 (164)
T ss_dssp SCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHhcCCceEEEEEECCCCcEEEEEEE
Confidence 345555555544433334344433499999843
No 155
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=38.90 E-value=21 Score=21.28 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=13.0
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
-=|+.|..|++++|+
T Consensus 102 GrpI~Dn~GrVVaIV 116 (149)
T 1vcp_A 102 GRPIFDNKGRVVAIV 116 (149)
T ss_dssp TCEEECTTSCEEEEE
T ss_pred CCccCcCCCcEEEEE
Confidence 358999999999998
No 156
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=38.82 E-value=20 Score=23.66 Aligned_cols=17 Identities=0% Similarity=0.040 Sum_probs=14.0
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
-=|++|.+|+++||++.
T Consensus 170 GGPlv~~~G~vvGI~s~ 186 (324)
T 1y8t_A 170 GGALVNMNAQLVGVNSA 186 (324)
T ss_dssp TEEEECTTSEEEEEEEE
T ss_pred cCcEECCCCeEEEEEee
Confidence 35899988999999854
No 157
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=38.79 E-value=20 Score=24.16 Aligned_cols=17 Identities=6% Similarity=0.051 Sum_probs=13.8
Q ss_pred CEeEEEcCCCcEEEEEE
Q 047148 29 LHLPVIDKDGGVAACLD 45 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~ 45 (84)
.-=|++|.+|+++||.+
T Consensus 187 SGGPLvn~~G~vVGI~s 203 (345)
T 3stj_A 187 SGGALLNLNGELIGINT 203 (345)
T ss_dssp TTCEEECTTSCEEEEEE
T ss_pred CccceeCCCCEEEEEEe
Confidence 33589999999999974
No 158
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=38.77 E-value=21 Score=21.60 Aligned_cols=14 Identities=36% Similarity=0.695 Sum_probs=12.6
Q ss_pred eEEEcCCCcEEEEE
Q 047148 31 LPVIDKDGGVAACL 44 (84)
Q Consensus 31 ipVvd~~g~l~Giv 44 (84)
=||.|..|++++|+
T Consensus 112 RpI~DN~GrVVaiv 125 (161)
T 1svp_A 112 RPIMDNSGRVVAIV 125 (161)
T ss_dssp CEEECTTSCEEEEE
T ss_pred CccCcCCCcEEEEE
Confidence 48999999999998
No 159
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=38.59 E-value=21 Score=19.18 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=12.8
Q ss_pred CEeEEEcCCCcEEEEE
Q 047148 29 LHLPVIDKDGGVAACL 44 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv 44 (84)
...|+.|++|++.|++
T Consensus 97 ~~~pi~~~~g~~~g~v 112 (121)
T 4hi4_A 97 DVVPVFNDANARLGSA 112 (121)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 3568888889999887
No 160
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=36.73 E-value=24 Score=21.29 Aligned_cols=15 Identities=33% Similarity=0.634 Sum_probs=13.0
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
-=|+.|..|++++|+
T Consensus 109 GrpI~Dn~GrVVaIV 123 (157)
T 1ep5_B 109 GRPILDNQGRVVAIV 123 (157)
T ss_dssp TCEEECTTSCEEEEE
T ss_pred CCccCcCCCcEEEEE
Confidence 358999999999998
No 161
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=36.43 E-value=21 Score=22.28 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=13.2
Q ss_pred CEeEEEcCCCcEEEEE
Q 047148 29 LHLPVIDKDGGVAACL 44 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv 44 (84)
+-=||+|.+|+++|+.
T Consensus 120 SGSPIin~~G~vVGLY 135 (172)
T 2fp7_B 120 SGSPIVDKNGDVIGLY 135 (172)
T ss_dssp TTCEEECTTSCEEEES
T ss_pred CCCceEccCCcEEEEe
Confidence 3358999999999986
No 162
>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1
Probab=36.17 E-value=61 Score=18.42 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=15.3
Q ss_pred HHHhCCCCEeEEEcCCCcEEEEEEH
Q 047148 22 IMHDGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 22 ~m~~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
.+.+.....+.+...+|+++|++..
T Consensus 41 ~~~~~~~~~~~v~~~~~~ivG~~~~ 65 (164)
T 1ygh_A 41 LVYDRSHLSMAVIRKPLTVVGGITY 65 (164)
T ss_dssp HHHCTTCEEEEEEETTTEEEEEEEE
T ss_pred HhhCCCceEEEEECCCCEEEEEEEE
Confidence 3333334444566667999999854
No 163
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=35.90 E-value=24 Score=22.24 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=13.2
Q ss_pred CEeEEEcCCCcEEEEE
Q 047148 29 LHLPVIDKDGGVAACL 44 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv 44 (84)
+-=||+|.+|+++|+.
T Consensus 134 SGSPIin~~G~vvGLY 149 (185)
T 2ggv_B 134 SGSPIVDKNGDVIGLY 149 (185)
T ss_dssp TTCEEECTTSCEEEEE
T ss_pred CCCceEcCCCcEEEEe
Confidence 3358999999999986
No 164
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=35.05 E-value=26 Score=22.61 Aligned_cols=17 Identities=18% Similarity=0.073 Sum_probs=13.5
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
-=|+++.+|+++||++.
T Consensus 170 GGPLv~~~g~lvGIvS~ 186 (274)
T 2o8l_A 170 GSPVFNEKNEVIGIHWG 186 (274)
T ss_dssp TCEEECTTSCEEEEEEE
T ss_pred hhheeccCCeEEEEEeC
Confidence 34788878999999954
No 165
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=34.86 E-value=52 Score=20.35 Aligned_cols=16 Identities=13% Similarity=0.127 Sum_probs=13.6
Q ss_pred CEeEEEcCCCcEEEEE
Q 047148 29 LHLPVIDKDGGVAACL 44 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv 44 (84)
...|+.|++|++.|++
T Consensus 114 ~~~Pi~d~~G~~~g~v 129 (233)
T 3vol_A 114 DVVPVFNDANERLGSA 129 (233)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 4569999899999988
No 166
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=34.48 E-value=64 Score=18.21 Aligned_cols=26 Identities=4% Similarity=0.115 Sum_probs=18.3
Q ss_pred HHHHHHhCCCCEeEEEcCCCcEEEEE
Q 047148 19 ALHIMHDGKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 19 a~~~m~~~~~~~ipVvd~~g~l~Giv 44 (84)
+.+.+.-.+.....++|.+|+++...
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred HHHHcCcccCceEEEECCCCeEEEec
Confidence 33444444577888999999988876
No 167
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=34.39 E-value=23 Score=22.32 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=13.1
Q ss_pred CEeEEEcCCCcEEEEE
Q 047148 29 LHLPVIDKDGGVAACL 44 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv 44 (84)
+-=||+|.+|+++|+.
T Consensus 135 SGSPIin~~G~vvGLY 150 (185)
T 2fom_B 135 SGSPIVDKKGKVVGLY 150 (185)
T ss_dssp TTCEEECTTSCEEEET
T ss_pred CCCceEccCCcEEEEe
Confidence 3358999999999876
No 168
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=33.82 E-value=58 Score=17.47 Aligned_cols=20 Identities=10% Similarity=0.077 Sum_probs=13.2
Q ss_pred CCCEeEEEcCCCcEEEEEEH
Q 047148 27 KFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv~~ 46 (84)
.-..+.+...+|+++|++..
T Consensus 49 ~~~~~~v~~~~~~~vG~~~~ 68 (150)
T 3t9y_A 49 DDYFLLLLIKENKIIGLSGM 68 (150)
T ss_dssp TTEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEEEECCEEEEEEEE
Confidence 33444555567999999843
No 169
>1f5m_A GAF; CGMP binding, signaling protein; 1.90A {Saccharomyces cerevisiae} SCOP: d.110.2.1 PDB: 3ko6_A*
Probab=33.05 E-value=31 Score=20.85 Aligned_cols=17 Identities=29% Similarity=0.704 Sum_probs=14.0
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
.+|+...+|+++|.+++
T Consensus 134 ~vPi~~~~g~viGVL~l 150 (180)
T 1f5m_A 134 VVPIISNDGKTLGVIDI 150 (180)
T ss_dssp EEEEECTTSCEEEEEEE
T ss_pred EEEEEcCCCeEEEEEEe
Confidence 57998757899999965
No 170
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=33.02 E-value=53 Score=21.03 Aligned_cols=21 Identities=19% Similarity=0.101 Sum_probs=17.9
Q ss_pred CEeEEEcCCCcEEEEEEHHHH
Q 047148 29 LHLPVIDKDGGVAACLDVLQI 49 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~~~i 49 (84)
..++++|++|+++|..+....
T Consensus 38 E~~~lvd~~~~~iG~~~r~~~ 58 (246)
T 2pny_A 38 EMLIVVDENDKVIGADTKRNC 58 (246)
T ss_dssp CEEEEECTTCCEEEEEEHHHH
T ss_pred ceEEEEcCCCCEEEEEEhHHh
Confidence 359999999999999977764
No 171
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=32.02 E-value=28 Score=22.19 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=14.4
Q ss_pred CCCEeEEEcCCCcEEEEE
Q 047148 27 KFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv 44 (84)
+-+-=||+|.+|+++|+.
T Consensus 137 GTSGSPIin~~G~VVGLY 154 (198)
T 3e90_B 137 GTSGSPIVDKNGDVIGLY 154 (198)
T ss_dssp TCTTCEEECTTCCEEEEC
T ss_pred CCCCCceecCCCcEEEEe
Confidence 344469999999999987
No 172
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=31.82 E-value=57 Score=20.64 Aligned_cols=22 Identities=9% Similarity=-0.067 Sum_probs=18.5
Q ss_pred CCEeEEEcCCCcEEEEEEHHHH
Q 047148 28 FLHLPVIDKDGGVAACLDVLQI 49 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~~~i 49 (84)
-..++|+|++|+++|..+....
T Consensus 26 ~E~~~lvd~~~~~~G~~~r~~~ 47 (235)
T 2dho_A 26 AEMCILIDENDNKIGAETKKNC 47 (235)
T ss_dssp CCEEEEECTTCCEEEEEEHHHH
T ss_pred CcEEEEEcCCCCEEEEEEhHHh
Confidence 3469999999999999987764
No 173
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=31.66 E-value=32 Score=22.57 Aligned_cols=14 Identities=36% Similarity=0.646 Sum_probs=12.6
Q ss_pred eEEEcCCCcEEEEE
Q 047148 31 LPVIDKDGGVAACL 44 (84)
Q Consensus 31 ipVvd~~g~l~Giv 44 (84)
=||.|..|++++||
T Consensus 207 RpI~DN~GrVVaIV 220 (253)
T 2yew_A 207 RPIFDNTGKVVAIV 220 (253)
T ss_dssp CEEECSSCBEEEEE
T ss_pred CccccCCCcEEEEE
Confidence 48999999999998
No 174
>2h3o_A MERF; membrane protein, alpha-helix, bicelle; NMR {Morganella morganii} PDB: 2lj2_A
Probab=31.35 E-value=9.9 Score=19.78 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=6.4
Q ss_pred hhhhHHHHHHHHhhhc
Q 047148 68 LTCCFYHLAKALFGIV 83 (84)
Q Consensus 68 ~~~~~~~~~~~~~~~~ 83 (84)
-.||+.-+.-.|+|.+
T Consensus 8 aLCC~tPvLvil~G~~ 23 (61)
T 2h3o_A 8 ALSSFTPVLVILLGVV 23 (61)
T ss_dssp --------CHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh
Confidence 4799999998888864
No 175
>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti}
Probab=30.99 E-value=91 Score=19.05 Aligned_cols=20 Identities=0% Similarity=-0.027 Sum_probs=13.1
Q ss_pred hCCCCEeEEEcCCCcEEEEE
Q 047148 25 DGKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 25 ~~~~~~ipVvd~~g~l~Giv 44 (84)
+.+...+.+.+.+|+++|++
T Consensus 83 ~~~~~~va~~~~~g~IVG~a 102 (238)
T 4fd7_A 83 PDRMSLVCFREGSDEIVGVN 102 (238)
T ss_dssp GGSCCEEEEETTCCSEEEEE
T ss_pred hCCcEEEEEECCCCcEEEEE
Confidence 44555554444468999998
No 176
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=30.97 E-value=39 Score=20.74 Aligned_cols=14 Identities=14% Similarity=0.154 Sum_probs=11.5
Q ss_pred eEEEcCCCcEEEEE
Q 047148 31 LPVIDKDGGVAACL 44 (84)
Q Consensus 31 ipVvd~~g~l~Giv 44 (84)
.||.+.+|++.|++
T Consensus 132 ~pi~~~~g~~~Gvl 145 (254)
T 3lif_A 132 RRLETTDGKFFGVV 145 (254)
T ss_dssp EEEECTTCCEEEEE
T ss_pred eeeeCCCCCEeEEE
Confidence 47777789999998
No 177
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=30.64 E-value=68 Score=17.32 Aligned_cols=18 Identities=11% Similarity=0.147 Sum_probs=12.0
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
..+.|..++|+++|++..
T Consensus 51 ~~~~v~~~~~~ivG~~~~ 68 (157)
T 3mgd_A 51 LVEWIAEENNQIIATAAI 68 (157)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEECCEEEEEEEE
Confidence 344455557999999843
No 178
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=30.58 E-value=34 Score=21.95 Aligned_cols=16 Identities=19% Similarity=0.107 Sum_probs=12.9
Q ss_pred eEEEcCCCcEEEEEEH
Q 047148 31 LPVIDKDGGVAACLDV 46 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~ 46 (84)
=|+++.+|+++||++.
T Consensus 171 GPLv~~~g~lvGIvS~ 186 (268)
T 1wcz_A 171 SPVFNEKNEVIGIHWG 186 (268)
T ss_dssp CEEECTTSCEEEEEEE
T ss_pred CeEEccCCEEEEEEeC
Confidence 4788877999999954
No 179
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=30.49 E-value=30 Score=21.94 Aligned_cols=18 Identities=22% Similarity=0.397 Sum_probs=14.4
Q ss_pred CCCEeEEEcCCCcEEEEE
Q 047148 27 KFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv 44 (84)
+-+-=||+|.+|+++|+.
T Consensus 142 GTSGSPIin~~G~VVGLY 159 (191)
T 3u1j_B 142 GTSGSPIINREGKVVGLY 159 (191)
T ss_dssp TCTTCEEECTTSCEEEEC
T ss_pred CCCCCceecCCCcEEEEe
Confidence 344469999999999987
No 180
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=30.14 E-value=42 Score=17.44 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=11.2
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
..|+.|++|++.|++
T Consensus 87 ~~pi~d~~G~~~~~v 101 (109)
T 1n9l_A 87 VTPIKTPDGRVSKFV 101 (109)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 357778888887776
No 181
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=30.11 E-value=33 Score=22.66 Aligned_cols=14 Identities=36% Similarity=0.695 Sum_probs=12.6
Q ss_pred eEEEcCCCcEEEEE
Q 047148 31 LPVIDKDGGVAACL 44 (84)
Q Consensus 31 ipVvd~~g~l~Giv 44 (84)
=||.|..|++++||
T Consensus 217 RpI~DN~GrVVaIV 230 (264)
T 1kxf_A 217 RPIMDNSGRVVAIV 230 (264)
T ss_dssp CEEECTTSCEEEEE
T ss_pred CccccCCCcEEEEE
Confidence 48999999999998
No 182
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=30.11 E-value=72 Score=17.45 Aligned_cols=19 Identities=11% Similarity=-0.027 Sum_probs=12.4
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
-..+.+...+|+++|++..
T Consensus 75 ~~~~~v~~~~~~~vG~~~~ 93 (168)
T 1bo4_A 75 TFIALAAFDQEAVVGALAA 93 (168)
T ss_dssp SEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEEEECCeEEEEEEE
Confidence 3334455557999999844
No 183
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=29.96 E-value=74 Score=17.54 Aligned_cols=18 Identities=22% Similarity=0.279 Sum_probs=12.5
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
..+.|...+|+++|++..
T Consensus 51 ~~~~v~~~~~~~vG~~~~ 68 (150)
T 2dxq_A 51 LTIFVATENGKPVATATL 68 (150)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred ceEEEEecCCEEEEEEEE
Confidence 345555557899999954
No 184
>3zxu_A MCM21; cell cycle, COMA complex, protein complex, cell division; 3.70A {Kluyveromyces lactis}
Probab=29.63 E-value=37 Score=22.97 Aligned_cols=23 Identities=9% Similarity=-0.166 Sum_probs=18.5
Q ss_pred HHHhCCCCEeEEEcCCCcEEEEE
Q 047148 22 IMHDGKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 22 ~m~~~~~~~ipVvd~~g~l~Giv 44 (84)
..+-.++..+|+.|.+++++|+=
T Consensus 119 lYRmfGITaFPv~DP~~~lLGIR 141 (296)
T 3zxu_A 119 SVRLIGVSLFPVNYDNIEFMGIR 141 (296)
T ss_dssp HHHTTSEEEEEEECSSBEEEEEE
T ss_pred HHHhhcceeeeeeCCCCCeEEEE
Confidence 34446899999999888999974
No 185
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=29.32 E-value=46 Score=16.56 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=10.6
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
..|+.|++|++.|++
T Consensus 93 ~~p~~~~~g~~~~~~ 107 (114)
T 3luq_A 93 VRPWYEGEGRVGGVV 107 (114)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEeECCCCCEEEEE
Confidence 347777778777776
No 186
>3e8l_C Serine proteinase inhibitor A; beta-trefoil fold, protease inhibitor, complex, DIG hydrolase, metal-binding, protease, secreted; 2.48A {Sagittaria sagittifolia}
Probab=29.30 E-value=11 Score=23.68 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=6.4
Q ss_pred hCCCCEeEEEcCCCc
Q 047148 25 DGKFLHLPVIDKDGG 39 (84)
Q Consensus 25 ~~~~~~ipVvd~~g~ 39 (84)
.++.+++||+|.+|.
T Consensus 3 ~~~~~~~~~~~~~~~ 17 (185)
T 3e8l_C 3 HHHHHHMPVVDSDGD 17 (185)
T ss_dssp -------CCBCTTSC
T ss_pred cccccccceEcCCCC
Confidence 456778999987764
No 187
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}
Probab=29.30 E-value=55 Score=17.57 Aligned_cols=19 Identities=16% Similarity=-0.181 Sum_probs=13.7
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
...+.|...+|+++|++..
T Consensus 54 ~~~~~v~~~~~~~vG~~~~ 72 (157)
T 3dsb_A 54 KGKYHVYTVFDKVVAQIMY 72 (157)
T ss_dssp GCEEEEEEETTEEEEEEEE
T ss_pred cceEEEEEeCCcEEEEEEE
Confidence 3455566668999999954
No 188
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=29.15 E-value=75 Score=17.36 Aligned_cols=19 Identities=5% Similarity=0.107 Sum_probs=13.9
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
...+.+...+|+++|++..
T Consensus 65 ~~~~~v~~~~~~~vG~~~~ 83 (161)
T 3i3g_A 65 VTKVFCHQPTGRIVGSASL 83 (161)
T ss_dssp EEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEEEcCCCeEEEEEE
Confidence 3455667778999999844
No 189
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=28.33 E-value=51 Score=16.31 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=17.5
Q ss_pred HHHHHhCCCCEeEEEcCCCcEEEEEEHH
Q 047148 20 LHIMHDGKFLHLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 20 ~~~m~~~~~~~ipVvd~~g~l~Giv~~~ 47 (84)
.+.+.+.++..+|++-.+|+.+|-.+..
T Consensus 40 ~~~~~~~g~~~vP~~~~~g~~~~g~~~~ 67 (81)
T 1h75_A 40 AEALRAQGFRQLPVVIAGDLSWSGFRPD 67 (81)
T ss_dssp HHHHHHTTCCSSCEEEETTEEEESCCHH
T ss_pred HHHHHHhCCCccCEEEECCEEEecCCHH
Confidence 3444557788888775567766555443
No 190
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=28.23 E-value=33 Score=23.16 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=13.9
Q ss_pred CCEeEEEcCCCcEEEEE
Q 047148 28 FLHLPVIDKDGGVAACL 44 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv 44 (84)
++..||.|++|++.|.+
T Consensus 322 v~~~PI~d~~G~~~G~v 338 (369)
T 3cax_A 322 IKYVPLFNEKGEYIGTL 338 (369)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred EEEEEEECCCCCEEEEE
Confidence 34568888889999988
No 191
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=27.78 E-value=67 Score=18.81 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=13.4
Q ss_pred EeEEEcCCCcEEEEEE
Q 047148 30 HLPVIDKDGGVAACLD 45 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~ 45 (84)
.+.++|.+|+++++..
T Consensus 136 ~~~liD~~G~i~~~~~ 151 (170)
T 4hde_A 136 SFYLIDQNGKVMKKYS 151 (170)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCeEEEEEC
Confidence 4678999999999873
No 192
>3ksh_A Putative uncharacterized protein; FRMSR, free-Met-R-SO, oxidoreductase; 1.50A {Staphylococcus aureus} SCOP: d.110.2.0 PDB: 3ksf_A 3ksi_A 3ksg_A*
Probab=27.63 E-value=41 Score=20.27 Aligned_cols=18 Identities=22% Similarity=0.540 Sum_probs=14.4
Q ss_pred CEeEEEcCCCcEEEEEEHH
Q 047148 29 LHLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~~ 47 (84)
=.+|+.. +|+++|++++.
T Consensus 116 i~VPI~~-~g~viGVL~i~ 133 (160)
T 3ksh_A 116 IVVPIFK-DDKIIGVLDID 133 (160)
T ss_dssp EEEEEEE-TTEEEEEEEEE
T ss_pred EEEEEEE-CCEEEEEEEEe
Confidence 3679987 68999999664
No 193
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=27.62 E-value=80 Score=17.20 Aligned_cols=17 Identities=18% Similarity=0.104 Sum_probs=12.0
Q ss_pred CEeEEEcCCCcEEEEEE
Q 047148 29 LHLPVIDKDGGVAACLD 45 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~ 45 (84)
..+.|...+|+++|++.
T Consensus 55 ~~~~va~~~~~ivG~~~ 71 (153)
T 1z4e_A 55 NELIVACNGEEIVGMLQ 71 (153)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred eeEEEEecCCcEEEEEE
Confidence 34555556789999984
No 194
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1
Probab=27.59 E-value=84 Score=17.44 Aligned_cols=19 Identities=11% Similarity=0.078 Sum_probs=12.9
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
-..+.|...+|+++|++..
T Consensus 64 ~~~~~v~~~~~~~vG~~~~ 82 (159)
T 2aj6_A 64 NDKIYIYENEGQLIAFIWG 82 (159)
T ss_dssp SEEEEEEEETTEEEEEEEE
T ss_pred CcEEEEEEECCeEEEEEEE
Confidence 3445555567999999843
No 195
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=27.50 E-value=81 Score=17.22 Aligned_cols=19 Identities=11% Similarity=0.030 Sum_probs=13.4
Q ss_pred CCCEeEEEcCCCcEEEEEE
Q 047148 27 KFLHLPVIDKDGGVAACLD 45 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv~ 45 (84)
.-..+.|...+|+++|++.
T Consensus 54 ~~~~~~v~~~~~~~vG~~~ 72 (166)
T 3jvn_A 54 PECMVYVAEMDDVIIGFIT 72 (166)
T ss_dssp TTEEEEEEESSSSEEEEEE
T ss_pred CCcEEEEEEECCEEEEEEE
Confidence 3344556666899999995
No 196
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=27.11 E-value=41 Score=23.56 Aligned_cols=15 Identities=7% Similarity=0.142 Sum_probs=13.0
Q ss_pred eEEEcCCCcEEEEEE
Q 047148 31 LPVIDKDGGVAACLD 45 (84)
Q Consensus 31 ipVvd~~g~l~Giv~ 45 (84)
=|++|.+|+++||.+
T Consensus 207 GPl~n~~G~VIGI~t 221 (451)
T 3pv2_A 207 GALVNAKGELIGINT 221 (451)
T ss_dssp SEEEETTCCEEEEEE
T ss_pred CcccCCCCeEEEEEe
Confidence 488999999999974
No 197
>3rfb_A Putative uncharacterized protein; FRMSR, GAF, oxidoreductase, SME; HET: SME; 2.30A {Streptococcus pneumoniae}
Probab=26.81 E-value=43 Score=20.47 Aligned_cols=18 Identities=22% Similarity=0.560 Sum_probs=14.1
Q ss_pred CEeEEEcCCCcEEEEEEHH
Q 047148 29 LHLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~~ 47 (84)
=.+|+.. +|+++|++++.
T Consensus 117 i~VPI~~-~g~viGVL~i~ 134 (171)
T 3rfb_A 117 IVVPMMK-NGQLLGVLDLD 134 (171)
T ss_dssp EEEEEEE-TTEEEEEEEEE
T ss_pred EEEEEEE-CCEEEEEEEEe
Confidence 3679987 68999999554
No 198
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=26.62 E-value=37 Score=22.19 Aligned_cols=18 Identities=11% Similarity=0.392 Sum_probs=14.5
Q ss_pred CCCEeEEEcCCCcEEEEE
Q 047148 27 KFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv 44 (84)
+-.-=||+|.+|+++|+.
T Consensus 183 GTSGSPIin~~G~VvGLY 200 (236)
T 3lkw_A 183 GTAGSPIVNREGKIVGLY 200 (236)
T ss_dssp TCTTCEEECTTSCEEEES
T ss_pred CCCCCceecCCCcEEEEe
Confidence 344469999999999987
No 199
>4edg_A DNA primase; catalytic domain, nucleoside triphosphate, nucleoside polyph protein-ligand complex, transferase; HET: DNA ATP; 2.00A {Staphylococcus aureus} PDB: 4e2k_A* 4edk_A* 4edr_A* 4edt_A* 4edv_A* 4ee1_A*
Probab=26.44 E-value=43 Score=22.71 Aligned_cols=15 Identities=13% Similarity=0.388 Sum_probs=13.8
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
.+|+.|..|+++|+-
T Consensus 99 ~fPI~d~~G~vigF~ 113 (329)
T 4edg_A 99 MFPLKNAQGRIVGYS 113 (329)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 679999999999997
No 200
>2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum}
Probab=26.43 E-value=97 Score=19.14 Aligned_cols=28 Identities=7% Similarity=0.011 Sum_probs=17.2
Q ss_pred HHHHHHhCCCCEeEEEcCCCcEEEEEEH
Q 047148 19 ALHIMHDGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 19 a~~~m~~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
.+..+....-..+.|...+|+++|++..
T Consensus 51 ~l~~~~~~~~~~~~vA~~dg~iVG~~~l 78 (211)
T 2q04_A 51 ALVEIAALEEGRIIIARQGNDIIGYVTF 78 (211)
T ss_dssp HHHHHHTSSSCEEEEEEETTEEEEEEEE
T ss_pred HHHHHHhCCCcEEEEEEECCEEEEEEEE
Confidence 3433434444556566667999999854
No 201
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=26.42 E-value=41 Score=19.67 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=14.0
Q ss_pred CCEeEEEcCCCcEEEEE
Q 047148 28 FLHLPVIDKDGGVAACL 44 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv 44 (84)
+...|+.|++|++.|++
T Consensus 122 ~ti~Pl~d~~G~v~gv~ 138 (152)
T 3mxq_A 122 LEVIPIHSEDGTIEHVC 138 (152)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred EEEEEEECCCCCEEEEE
Confidence 34479999999999988
No 202
>4eu0_A PELD; C-DI-GMP, signaling protein; HET: C2E; 1.70A {Pseudomonas aeruginosa} PDB: 4euv_A* 4etz_A* 4etx_A 4dmz_A 4dn0_A*
Probab=26.00 E-value=50 Score=22.15 Aligned_cols=19 Identities=37% Similarity=0.658 Sum_probs=15.7
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
+=.+|++|.+|++.|++-+
T Consensus 105 L~viPLld~~g~i~Gvl~V 123 (298)
T 4eu0_A 105 AVCVPLVDTDGRILALLAV 123 (298)
T ss_dssp CEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeecCCCcEEEEEEE
Confidence 5567999999999999933
No 203
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=25.94 E-value=45 Score=21.25 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=12.0
Q ss_pred EEEcCCCcEEEEEEH
Q 047148 32 PVIDKDGGVAACLDV 46 (84)
Q Consensus 32 pVvd~~g~l~Giv~~ 46 (84)
||+|++ +++|+.+.
T Consensus 117 PVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 117 AVVQGD-AVVGVHTG 130 (198)
T ss_dssp EEEETT-EEEEEEEE
T ss_pred ccccCC-eEEEEEec
Confidence 899977 99999965
No 204
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=25.72 E-value=52 Score=20.30 Aligned_cols=17 Identities=12% Similarity=-0.021 Sum_probs=13.7
Q ss_pred eEEEcCCCcEEEEEEHH
Q 047148 31 LPVIDKDGGVAACLDVL 47 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~~ 47 (84)
=|++|.+++++||++..
T Consensus 145 GPl~~~~g~~vGI~s~~ 161 (198)
T 2h5c_A 145 GSWITSAGQAQGVMSGG 161 (198)
T ss_dssp CEEECTTCBEEEEEEEE
T ss_pred eEEEeeCCEEEEEEEee
Confidence 48887789999999653
No 205
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=25.69 E-value=83 Score=16.69 Aligned_cols=17 Identities=0% Similarity=-0.044 Sum_probs=11.8
Q ss_pred EeEEEcC--CCcEEEEEEH
Q 047148 30 HLPVIDK--DGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~--~g~l~Giv~~ 46 (84)
.+.+... +|+++|++..
T Consensus 48 ~~~v~~~~~~~~~vG~~~~ 66 (153)
T 2eui_A 48 VIYLALADEEDRLLGFCQL 66 (153)
T ss_dssp EEEEEECSSSCCEEEEEEE
T ss_pred eEEEEEecCCCcEEEEEEE
Confidence 3445555 7899999854
No 206
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=24.98 E-value=26 Score=20.96 Aligned_cols=29 Identities=14% Similarity=0.013 Sum_probs=16.8
Q ss_pred HHHHHHHHHhCCCCEeEEEcCCCcEEEEEEH
Q 047148 16 ILDALHIMHDGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 16 l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
..+.++.+.+. .++.|-.++|+++|++..
T Consensus 24 ~~~~L~~~~~~--~~~fVAe~~g~ivG~v~l 52 (141)
T 2d4p_A 24 SLGALRFFART--GHSFLAEEGEEPMGFALA 52 (141)
T ss_dssp CHHHHHHHHHH--SCCEEEEETTEEEEEEEE
T ss_pred hHHHHHhcCCC--CeEEEEEECCEEEEEEee
Confidence 34555555333 334455557999997743
No 207
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=24.72 E-value=40 Score=24.52 Aligned_cols=16 Identities=13% Similarity=0.133 Sum_probs=13.4
Q ss_pred EeEEEcCCCcEEEEEE
Q 047148 30 HLPVIDKDGGVAACLD 45 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~ 45 (84)
-=|++|.+|+++||.+
T Consensus 201 GGPLvn~~GeVIGInt 216 (539)
T 4fln_A 201 GGPAFNDQGECIGVAF 216 (539)
T ss_dssp TSEEECSSSCEEEEEC
T ss_pred cchhccCCCcEEEEEE
Confidence 3589999999999973
No 208
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=24.72 E-value=92 Score=16.89 Aligned_cols=18 Identities=11% Similarity=0.063 Sum_probs=12.6
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
..+.+.+.+|+++|++..
T Consensus 59 ~~~v~~~~~~~~vG~~~~ 76 (174)
T 2cy2_A 59 RLFVAESESGEVVGFAAF 76 (174)
T ss_dssp EEEEEECTTSCEEEEEEE
T ss_pred eEEEEEecCCEEEEEEEE
Confidence 345555568999999944
No 209
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0
Probab=24.62 E-value=50 Score=19.82 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=13.9
Q ss_pred EeEEEcCCCcEEEEEEHH
Q 047148 30 HLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~~ 47 (84)
.+|+.. +|+++|++++.
T Consensus 118 ~vPi~~-~g~viGVL~i~ 134 (167)
T 3mmh_A 118 VVPLFS-DGRCIGVLDAD 134 (167)
T ss_dssp EEEEEE-TTEEEEEEEEE
T ss_pred EEEecc-CCEEEEEEEEe
Confidence 579997 68999999654
No 210
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=24.46 E-value=58 Score=18.18 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=12.6
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
.+|+.. +|+++|++.+
T Consensus 122 ~vPl~~-~~~~iGvl~~ 137 (181)
T 3e0y_A 122 SFPIGD-KKEVYGVINL 137 (181)
T ss_dssp EEEEEC-SSCEEEEEEE
T ss_pred EEEEEe-CCeEEEEEEE
Confidence 469997 5899999943
No 211
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=24.45 E-value=96 Score=17.02 Aligned_cols=18 Identities=22% Similarity=0.128 Sum_probs=12.3
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
..+.|...+|+++|++..
T Consensus 63 ~~~~v~~~~~~ivG~~~~ 80 (165)
T 1s3z_A 63 LASFIAMADGVAIGFADA 80 (165)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred ceEEEEEECCEEEEEEEE
Confidence 344455557999999844
No 212
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=24.39 E-value=73 Score=15.63 Aligned_cols=18 Identities=17% Similarity=0.028 Sum_probs=11.2
Q ss_pred hCCCCEeEEEcCCCcEEE
Q 047148 25 DGKFLHLPVIDKDGGVAA 42 (84)
Q Consensus 25 ~~~~~~ipVvd~~g~l~G 42 (84)
.++...+|++-.+|+.+|
T Consensus 46 ~~~~~~vP~l~~~g~~i~ 63 (82)
T 1fov_A 46 RSGRTTVPQIFIDAQHIG 63 (82)
T ss_dssp HHSSCCSCEEEETTEEEE
T ss_pred HhCCCCcCEEEECCEEEe
Confidence 346677887755666544
No 213
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=24.10 E-value=75 Score=18.11 Aligned_cols=19 Identities=21% Similarity=0.260 Sum_probs=14.1
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
...+.+.+.+|+++|++.+
T Consensus 60 ~~~~~v~~~dg~ivG~~~~ 78 (173)
T 4h89_A 60 SRTTVAVDADGTVLGSANM 78 (173)
T ss_dssp CEEEEEECTTCCEEEEEEE
T ss_pred ceEEEEEEeCCeEEEEEEE
Confidence 3456677888999999854
No 214
>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus}
Probab=23.96 E-value=93 Score=16.68 Aligned_cols=19 Identities=11% Similarity=-0.090 Sum_probs=12.8
Q ss_pred CEeEEEcCCCcEEEEEEHH
Q 047148 29 LHLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~~ 47 (84)
..+.+...+|+++|++...
T Consensus 62 ~~~~~~~~~~~~vG~~~~~ 80 (160)
T 3exn_A 62 RRAFLLFLGQEPVGYLDAK 80 (160)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEECCeEEEEEEee
Confidence 3444555589999999543
No 215
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=23.96 E-value=91 Score=16.55 Aligned_cols=17 Identities=6% Similarity=0.075 Sum_probs=12.1
Q ss_pred EeEEEc--CCCcEEEEEEH
Q 047148 30 HLPVID--KDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd--~~g~l~Giv~~ 46 (84)
.+.|.. .+|+++|++..
T Consensus 53 ~~~v~~~~~~~~~vG~~~~ 71 (152)
T 1qsm_A 53 WAAVAVESSSEKIIGMINF 71 (152)
T ss_dssp EEEEEEESSSCCEEEEEEE
T ss_pred eEEEEEeCCCCeEEEEEEE
Confidence 444555 68999999854
No 216
>1pm3_A MTH1895; unknown function, structural genomics, PSI, protein structure initiative; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.41.1.2
Probab=23.79 E-value=34 Score=18.89 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=17.8
Q ss_pred HHHh-CCCCEeEEEcCCCcEEEEE
Q 047148 22 IMHD-GKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 22 ~m~~-~~~~~ipVvd~~g~l~Giv 44 (84)
.|.. ..+...+|++.+|+-+|.|
T Consensus 20 ~Mr~~seL~Gk~Vin~dG~~LG~V 43 (97)
T 1pm3_A 20 HMRIVEEMVGKEVLDSSAKVIGKV 43 (97)
T ss_dssp CEETTTTSSSCEEECTTSCEEEEE
T ss_pred EEEeehhCCCCEeECCCCCEEeEE
Confidence 4554 5677788999889999988
No 217
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=23.65 E-value=51 Score=23.04 Aligned_cols=18 Identities=6% Similarity=0.014 Sum_probs=14.5
Q ss_pred CCEeEEEcCCCcEEEEEE
Q 047148 28 FLHLPVIDKDGGVAACLD 45 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~ 45 (84)
-.-=|++|.+|+++||.+
T Consensus 209 nSGGpl~n~~G~vvGI~~ 226 (448)
T 1ky9_A 209 NAGGALVNLNGELIGINT 226 (448)
T ss_dssp CCCSEEECTTSCEEEEEE
T ss_pred CCCCeeECCCCEEEEEEE
Confidence 344589999999999985
No 218
>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron}
Probab=23.54 E-value=1.1e+02 Score=17.36 Aligned_cols=32 Identities=9% Similarity=-0.062 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEH
Q 047148 15 TILDALHIMHDGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 15 ~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
+.....+.+.......+.+...+|+++|++..
T Consensus 36 ~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~ 67 (181)
T 3ey5_A 36 ELEHLREYTDRIGNFHNNIIFDDDLPIGFITY 67 (181)
T ss_dssp CHHHHHHHHHHCTTEEEEEEEETTEEEEEEEE
T ss_pred hHHHHHHHhccCCCeEEEEEEECCEEEEEEEE
Confidence 33444444442444445555567999999843
No 219
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=23.53 E-value=57 Score=16.06 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=10.1
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
..|+.|++|++.|++
T Consensus 98 ~~~~~~~~g~~~~~~ 112 (124)
T 3lyx_A 98 CVPIYGENYQMVGAL 112 (124)
T ss_dssp EEEEECSTTCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 346667777777765
No 220
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=23.49 E-value=1e+02 Score=17.05 Aligned_cols=18 Identities=17% Similarity=0.025 Sum_probs=12.1
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
..+.|...+|+++|++..
T Consensus 63 ~~~~v~~~~~~~vG~~~~ 80 (166)
T 4evy_A 63 ALQLLAYSDHQAIAMLEA 80 (166)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred ceEEEEEECCeEEEEEEE
Confidence 334455456999999954
No 221
>3hcy_A Putative two-component sensor histidine kinase PR; two-component sensor histidine kinase protein, structural GE PSI, MCSG; 2.80A {Sinorhizobium meliloti}
Probab=23.45 E-value=56 Score=17.94 Aligned_cols=17 Identities=12% Similarity=0.315 Sum_probs=13.3
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
=.+|+.. +|+++|++.+
T Consensus 94 ~~vPl~~-~~~~iGvl~~ 110 (151)
T 3hcy_A 94 GFFPLVT-EGRLIGKFMT 110 (151)
T ss_dssp EEEEEES-SSSEEEEEEE
T ss_pred EEeceEE-CCEEEEEEEE
Confidence 3569987 7899999843
No 222
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=23.29 E-value=68 Score=17.97 Aligned_cols=18 Identities=6% Similarity=-0.003 Sum_probs=13.1
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
..+.|...+|+++|++..
T Consensus 71 ~~~~v~~~~~~ivG~~~~ 88 (176)
T 3fyn_A 71 GRIWLIAEGTESVGYIVL 88 (176)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred cEEEEEEECCEEEEEEEE
Confidence 445566668999999954
No 223
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=23.10 E-value=53 Score=17.91 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=11.8
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
..|+.|++|++.|++
T Consensus 112 ~~pi~~~~g~~~g~~ 126 (158)
T 3k3c_A 112 VTPRRRADGSIEGVQ 126 (158)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEeECCCCCEEEEE
Confidence 348888889988887
No 224
>1ykd_A Adenylate cyclase; GAF domain, bound cyclic AMP ligand, lyase; HET: CMP; 1.90A {Anabaena SP}
Probab=22.94 E-value=62 Score=21.28 Aligned_cols=19 Identities=26% Similarity=0.667 Sum_probs=14.7
Q ss_pred CCEeEEEcCCCcEEEEEEH
Q 047148 28 FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~ 46 (84)
.=.+|+.+.+|+++|++.+
T Consensus 122 ~l~vPl~~~~g~~iGvl~l 140 (398)
T 1ykd_A 122 MLALPLLSEQGRLVAVVQL 140 (398)
T ss_dssp EEEEEEECSSCCEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEE
Confidence 3367999877999999943
No 225
>2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A*
Probab=22.87 E-value=1.1e+02 Score=17.33 Aligned_cols=20 Identities=20% Similarity=-0.144 Sum_probs=13.2
Q ss_pred CCEeEEEcCCCcEEEEEEHH
Q 047148 28 FLHLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~~ 47 (84)
-....++..+|+++|++...
T Consensus 62 ~~~~~~i~~~g~~vG~~~~~ 81 (194)
T 2z10_A 62 GRVNWAILFGKEVAGRISVI 81 (194)
T ss_dssp TCEEEEEEETTEEEEEEEEE
T ss_pred CceEEEEecCCCEEEEEEec
Confidence 33344456679999999543
No 226
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=22.81 E-value=50 Score=21.41 Aligned_cols=17 Identities=24% Similarity=0.471 Sum_probs=13.7
Q ss_pred CCEeEEEcCC-CcEEEEE
Q 047148 28 FLHLPVIDKD-GGVAACL 44 (84)
Q Consensus 28 ~~~ipVvd~~-g~l~Giv 44 (84)
++..||+|.. |+++|++
T Consensus 119 vRR~pIi~~~tGeVlG~L 136 (221)
T 2hje_A 119 VRRVPILDPSTGEVLGFS 136 (221)
T ss_dssp EEEEEEEETTTTEEEEEE
T ss_pred EEccceecCCCCcEEEEE
Confidence 4678999854 8999988
No 227
>3dba_A CONE CGMP-specific 3',5'-cyclic phosphodiesterase alpha'; 3', GAF domain, cyclic nucleotide phosphodiesterase hydrolase, lipoprotein, membrane; HET: 35G; 2.57A {Gallus gallus}
Probab=22.65 E-value=57 Score=19.07 Aligned_cols=19 Identities=16% Similarity=0.330 Sum_probs=14.6
Q ss_pred CCCEeEEEcCCCcEEEEEEH
Q 047148 27 KFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 27 ~~~~ipVvd~~g~l~Giv~~ 46 (84)
.+=.+|+... |+++|++.+
T Consensus 125 S~L~vPl~~~-~~viGVL~l 143 (180)
T 3dba_A 125 NMMAIPITQG-KEVLAVVMA 143 (180)
T ss_dssp CEEEEEEEET-TEEEEEEEE
T ss_pred EEEEEEeccC-CEEEEEEEE
Confidence 3446799984 899999954
No 228
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=22.61 E-value=1e+02 Score=16.73 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=13.3
Q ss_pred CCCEeEEEcC--CCcEEEEEEH
Q 047148 27 KFLHLPVIDK--DGGVAACLDV 46 (84)
Q Consensus 27 ~~~~ipVvd~--~g~l~Giv~~ 46 (84)
....+.|..+ +|+++|++..
T Consensus 66 ~~~~~~v~~~~~~~~ivG~~~~ 87 (165)
T 4ag7_A 66 PNYHIVVIEDSNSQKVVASASL 87 (165)
T ss_dssp SCCEEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEEEeCCCCeEEEEEEE
Confidence 3344555554 7999999965
No 229
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=22.61 E-value=37 Score=23.60 Aligned_cols=18 Identities=6% Similarity=0.008 Sum_probs=14.3
Q ss_pred CCEeEEEcCCCcEEEEEE
Q 047148 28 FLHLPVIDKDGGVAACLD 45 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~ 45 (84)
-.-=|++|.+|+++||.+
T Consensus 186 nSGGPl~n~~G~vvGI~~ 203 (436)
T 4a8c_A 186 NAGGALLNLNGELIGINT 203 (436)
T ss_pred CCcCcccCCCCEEEEEEe
Confidence 344589999999999974
No 230
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP}
Probab=22.48 E-value=68 Score=17.47 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=12.8
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
.+|+.. +|+++|++.+
T Consensus 119 ~vPl~~-~~~~~Gvl~l 134 (171)
T 3ci6_A 119 GVPVMY-RRKVMGVLVV 134 (171)
T ss_dssp EEEEEE-TTEEEEEEEE
T ss_pred EEeEEE-CCEEEEEEEE
Confidence 479986 6899999944
No 231
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=22.42 E-value=68 Score=17.49 Aligned_cols=17 Identities=18% Similarity=0.145 Sum_probs=12.4
Q ss_pred eEEEcCCCcEEEEEEHH
Q 047148 31 LPVIDKDGGVAACLDVL 47 (84)
Q Consensus 31 ipVvd~~g~l~Giv~~~ 47 (84)
..|...+|+++|++...
T Consensus 56 ~~v~~~~~~~vG~~~~~ 72 (160)
T 3f8k_A 56 TFLAEVDGKVVGEASLH 72 (160)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCeEEEEEEee
Confidence 44555679999999655
No 232
>3b47_A GSU0582, methyl-accepting chemotaxis protein; PAS domain, C-type heme containing sensor, unknown function, signaling protein; HET: HEM; 2.00A {Geobacter sulfurreducens}
Probab=22.10 E-value=69 Score=18.45 Aligned_cols=8 Identities=0% Similarity=0.136 Sum_probs=4.2
Q ss_pred CCcEEEEE
Q 047148 37 DGGVAACL 44 (84)
Q Consensus 37 ~g~l~Giv 44 (84)
+++++|.+
T Consensus 112 ~~~vLG~l 119 (134)
T 3b47_A 112 GARFNGAM 119 (134)
T ss_dssp TCSEEEEE
T ss_pred CCeEEEEE
Confidence 44555555
No 233
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=21.93 E-value=1.2e+02 Score=17.09 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=12.4
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
...++|.+|++++..
T Consensus 132 ~~~lid~~G~i~~~~ 146 (171)
T 2rli_A 132 AIYLLNPDGLFTDYY 146 (171)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred eEEEECCCCeEEEEE
Confidence 456889999999876
No 234
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=21.81 E-value=1.3e+02 Score=17.42 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=18.9
Q ss_pred CCEeEEEcCCCcEEEEEEHHHHHH
Q 047148 28 FLHLPVIDKDGGVAACLDVLQITH 51 (84)
Q Consensus 28 ~~~ipVvd~~g~l~Giv~~~~i~~ 51 (84)
...++++|++|+..|.........
T Consensus 9 ~E~~~i~d~~~~~~g~~~r~~~~~ 32 (180)
T 2fkb_A 9 TEWVDIVNEENEVIAQASREQMRA 32 (180)
T ss_dssp CCEEEEECTTSCEEEEEEHHHHHH
T ss_pred CeeEEEECCCCCEeeEEEHHHhhc
Confidence 456899999999999997666543
No 235
>2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans}
Probab=21.31 E-value=1.3e+02 Score=17.21 Aligned_cols=18 Identities=17% Similarity=0.047 Sum_probs=12.9
Q ss_pred EeEEEcCCCcEEEEEEHH
Q 047148 30 HLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~~ 47 (84)
.+.|...+|+++|++...
T Consensus 71 ~~~v~~~~~~~vG~~~~~ 88 (198)
T 2qml_A 71 TLMVGAINGVPMSYWESY 88 (198)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred eEEEEEECCEEEEEEEEE
Confidence 444566679999999653
No 236
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}
Probab=21.24 E-value=1.2e+02 Score=16.93 Aligned_cols=18 Identities=11% Similarity=0.132 Sum_probs=12.3
Q ss_pred EeEEEcCCCcEEEEEEHH
Q 047148 30 HLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~~ 47 (84)
.+.|...+|+++|++...
T Consensus 60 ~~~v~~~~~~~vG~~~~~ 77 (172)
T 2i79_A 60 ITLLAFLNGKIAGIVNIT 77 (172)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCEEEEEEEEE
Confidence 444555578999999543
No 237
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=21.22 E-value=1e+02 Score=16.17 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=15.8
Q ss_pred HHhCCCCEeEEEcCCCcEEEEE
Q 047148 23 MHDGKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 23 m~~~~~~~ipVvd~~g~l~Giv 44 (84)
+.-.+...+.++|.+|++++..
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~ 121 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTH 121 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEE
T ss_pred cCcccCCeEEEECCCCcEEEee
Confidence 3334567778899899887766
No 238
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=21.06 E-value=1.3e+02 Score=17.34 Aligned_cols=15 Identities=7% Similarity=0.138 Sum_probs=12.8
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
.+.++|.+|+++++.
T Consensus 129 ~~~lID~~G~i~~~~ 143 (170)
T 3me7_A 129 VVVVLSPELQIKDYI 143 (170)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred eEEEECCCCeEEEEE
Confidence 466999999999986
No 239
>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}
Probab=20.97 E-value=1.1e+02 Score=16.62 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=17.9
Q ss_pred CHHHHHHHHHhCCCCEeEEEcCCCcEEEEEEH
Q 047148 15 TILDALHIMHDGKFLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 15 ~l~~a~~~m~~~~~~~ipVvd~~g~l~Giv~~ 46 (84)
+.....+.+.+. ...+.+.+++|+++|++..
T Consensus 36 ~~~~~~~~~~~~-~~~~~~~~~~~~~vG~~~~ 66 (145)
T 3s6f_A 36 TPETLWRILDRA-AVFVLARTPDGQVIGFVNA 66 (145)
T ss_dssp CHHHHHHHHHHS-SEEEEEECTTCCEEEEEEE
T ss_pred CHHHHHHHhccC-ceEEEEECCCCCEEEEEEE
Confidence 445555555443 3344444447899999843
No 240
>1dd9_A DNA primase, DNAG; toprim, 3-helix bundle, DNA-binding protein, RNA polymerase, replication protein, transferase; HET: DNA; 1.60A {Escherichia coli} SCOP: e.13.1.1 PDB: 1dde_A* 1eqn_A* 3b39_A*
Probab=20.93 E-value=64 Score=21.88 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=13.5
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
.+|+.|.+|+++|+-
T Consensus 110 ~fPI~d~~G~vigf~ 124 (338)
T 1dd9_A 110 MFPIRDKRGRVIGFG 124 (338)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 579999999999987
No 241
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii}
Probab=20.93 E-value=75 Score=17.52 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=12.8
Q ss_pred EeEEEcCCCcEEEEEEH
Q 047148 30 HLPVIDKDGGVAACLDV 46 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~ 46 (84)
.+|+.. +|+++|++.+
T Consensus 117 ~vPl~~-~~~~~Gvl~~ 132 (171)
T 3trc_A 117 GIPIIE-QGELLGILVI 132 (171)
T ss_dssp EEEEEE-TTEEEEEEEE
T ss_pred EEeEEE-CCEEEEEEEE
Confidence 469987 5899999944
No 242
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=20.68 E-value=71 Score=18.09 Aligned_cols=26 Identities=12% Similarity=0.222 Sum_probs=18.4
Q ss_pred CHHHHHHHHHhC-CCCEeEEEcCCCcE
Q 047148 15 TILDALHIMHDG-KFLHLPVIDKDGGV 40 (84)
Q Consensus 15 ~l~~a~~~m~~~-~~~~ipVvd~~g~l 40 (84)
.+++.++.+..+ ++..+.|+|.+|.+
T Consensus 13 evEe~l~RI~~~kgV~G~iIln~~G~p 39 (106)
T 2hz5_A 13 EVEETLKRLQSQKGVQGIIVVNTEGIP 39 (106)
T ss_dssp --CHHHHHHHTSTTEEEEEEECTTCCE
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCCCe
Confidence 356777777654 88889999988754
No 243
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=20.61 E-value=1.2e+02 Score=16.81 Aligned_cols=15 Identities=20% Similarity=0.299 Sum_probs=11.8
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
...++|.+|++++..
T Consensus 129 ~~~lid~~G~i~~~~ 143 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYF 143 (164)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred eEEEECCCCeEEEEe
Confidence 345789999999886
No 244
>3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A*
Probab=20.41 E-value=1.1e+02 Score=18.06 Aligned_cols=19 Identities=11% Similarity=0.228 Sum_probs=12.5
Q ss_pred hCCCCEeEEEcCCCcEEEEE
Q 047148 25 DGKFLHLPVIDKDGGVAACL 44 (84)
Q Consensus 25 ~~~~~~ipVvd~~g~l~Giv 44 (84)
..+...+. ++++|+++|++
T Consensus 55 ~~~~~~va-~~~~g~ivG~~ 73 (215)
T 3te4_A 55 PDNCSYKA-VNKKGEIIGVF 73 (215)
T ss_dssp GGSCCEEE-EETTSCEEEEE
T ss_pred hCCcEEEE-EcCCCcEEEEE
Confidence 34444444 36689999996
No 245
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=20.28 E-value=1.3e+02 Score=17.75 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=21.1
Q ss_pred CCCHHHHHHHHHhCC------CCEeEEEcCCCcEEEEEEH
Q 047148 13 ETTILDALHIMHDGK------FLHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 13 ~~~l~~a~~~m~~~~------~~~ipVvd~~g~l~Giv~~ 46 (84)
+..+...+..+...+ --.+.++|.+|+++|--..
T Consensus 34 ~~~l~r~l~~l~~~~~~~~d~~~r~~l~d~eG~Il~~~~~ 73 (138)
T 3v67_A 34 ETDLGRILFRVEGNRAGKHDPRPRVFFSDYNGNVLTTDKR 73 (138)
T ss_dssp CCCHHHHHHHHHHTCCCTTCCSCEEEEECTTSCEECCCCS
T ss_pred CccHHHHHHHhcccccccCCCCccEEEEcCCCCEecCCcc
Confidence 345565555544321 1247889999999997743
No 246
>2jx0_A ARF GTPase-activating protein GIT1; paxillin binding domain homologue, ANK repeat, cytoplasm, GTPase activation, metal-binding; NMR {Rattus norvegicus}
Probab=20.22 E-value=37 Score=20.37 Aligned_cols=14 Identities=36% Similarity=0.672 Sum_probs=12.5
Q ss_pred cchhhhHHHHHHHH
Q 047148 66 RDLTCCFYHLAKAL 79 (84)
Q Consensus 66 ~~~~~~~~~~~~~~ 79 (84)
+++..|.+|++|+-
T Consensus 109 qqVi~cAYdIAkAa 122 (135)
T 2jx0_A 109 QQVIQCAYDIAKAA 122 (135)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 68999999999984
No 247
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens}
Probab=20.17 E-value=80 Score=17.36 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=13.3
Q ss_pred CEeEEEcCCCcEEEEEEH
Q 047148 29 LHLPVIDKDGGVAACLDV 46 (84)
Q Consensus 29 ~~ipVvd~~g~l~Giv~~ 46 (84)
=.+|+.. +|+++|++.+
T Consensus 116 l~vPl~~-~~~~iGvl~~ 132 (169)
T 3oov_A 116 VICPIVV-KGEAIGVFAV 132 (169)
T ss_dssp EEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEe-CCcEEEEEEE
Confidence 3579986 6899999954
No 248
>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A*
Probab=20.06 E-value=1.1e+02 Score=17.36 Aligned_cols=18 Identities=6% Similarity=-0.079 Sum_probs=12.4
Q ss_pred EeEEEcCCCcEEEEEEHH
Q 047148 30 HLPVIDKDGGVAACLDVL 47 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~~~ 47 (84)
.+.|+..+|+++|++...
T Consensus 79 ~~~v~~~~~~~vG~~~~~ 96 (202)
T 2bue_A 79 TPYIAMLNGEPIGYAQSY 96 (202)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred eeEEEEECCEEEEEEEEE
Confidence 444555579999999543
No 249
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1
Probab=20.04 E-value=92 Score=16.72 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=12.0
Q ss_pred EeEEEcCCCcEEEEEE
Q 047148 30 HLPVIDKDGGVAACLD 45 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv~ 45 (84)
.+.+.+.+|+++|++.
T Consensus 41 ~~~v~~~~~~~vG~~~ 56 (140)
T 1y9w_A 41 SLVVKNEEGKIFGGVT 56 (140)
T ss_dssp EEEEECTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEEE
Confidence 4566666899999873
No 250
>3fld_A Protein TRAI, DNA helicase I; novel alpha/beta core domain, alternative initiation, ATP- binding, conjugation, DNA-binding, hydrolase; 2.40A {Escherichia coli k-12}
Probab=20.00 E-value=79 Score=19.25 Aligned_cols=15 Identities=33% Similarity=0.603 Sum_probs=13.5
Q ss_pred EeEEEcCCCcEEEEE
Q 047148 30 HLPVIDKDGGVAACL 44 (84)
Q Consensus 30 ~ipVvd~~g~l~Giv 44 (84)
.+||.|.+|+-.|+.
T Consensus 53 alPv~D~NGK~AG~~ 67 (153)
T 3fld_A 53 ALPAFDRNGKSAGIW 67 (153)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred cceeecCCCcccceE
Confidence 579999999999987
Done!