BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047159
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SA32|CCB31_ARATH Putative cyclin-B3-1 OS=Arabidopsis thaliana GN=CYCB3-1 PE=2 SV=2
Length = 396
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 101/176 (57%), Gaps = 51/176 (28%)
Query: 2 LLPPMENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------- 46
L P + +++S +++P GI + +VH KFDLM ETLYL + L
Sbjct: 157 LNPALGHYLSAHAEVSPVTRGILINWLIEVHFKFDLMHETLYLTMDLLDRYLSQVPIHKN 216
Query: 47 ----------------------SVKDLISIS-ETYTRDHMLRMEKLMLKKLKFRLNA--- 80
+KDLISIS E+YTR+ +L ME+ MLK+LKFRLNA
Sbjct: 217 EMQLIGLTALLLASKYEDYWHPRIKDLISISAESYTREQILGMERSMLKQLKFRLNAPTP 276
Query: 81 ----------AQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQM 126
AQS+ KLE LAFYLIEL LV+YEALK+KPSLLCASAIYVARCTL M
Sbjct: 277 YVFMLRFLKAAQSNKKLEQLAFYLIELCLVEYEALKYKPSLLCASAIYVARCTLHM 332
>sp|Q9SFW6|CCB24_ARATH Cyclin-B2-4 OS=Arabidopsis thaliana GN=CYCB2-4 PE=2 SV=2
Length = 431
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 87/175 (49%), Gaps = 54/175 (30%)
Query: 3 LPPMENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL-------------- 46
+PP N+M NQ DI +M GI +VH KF+LM ETLYL + L
Sbjct: 194 VPP--NYMENQHDINERMRGILFDWLIEVHYKFELMEETLYLTINLIDRFLAVHQHIARK 251
Query: 47 ----------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------ 77
V DLI IS+ YTR +L MEKLM L+F
Sbjct: 252 KLQLVGVTAMLLACKYEEVSVPVVDDLILISDKAYTRTEILDMEKLMANTLQFNFCLPTP 311
Query: 78 -------LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
L AAQSD KLE L+F++IEL LV+YE L++ PS L ASAIY A+ TL+
Sbjct: 312 YVFMRRFLKAAQSDKKLELLSFFMIELCLVEYEMLQYTPSQLAASAIYTAQSTLK 366
>sp|P46277|CCNB1_MEDSV G2/mitotic-specific cyclin-1 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 428
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 84/168 (50%), Gaps = 51/168 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------------- 46
N+M+ Q DI +M I +VH KFDLM ETL+L V L
Sbjct: 192 NYMAQQFDINERMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVG 251
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V DLI IS+ YTR +L MEK+M+ LKF
Sbjct: 252 LVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRR 311
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQ+D KLE LAF+LIELSLV+Y LKF PS L A+A+Y A+CT+
Sbjct: 312 FLKAAQADRKLELLAFFLIELSLVEYAMLKFSPSQLAAAAVYTAQCTM 359
>sp|Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2
Length = 429
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 88/174 (50%), Gaps = 53/174 (30%)
Query: 3 LPPMENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL-------------- 46
+PP N+M NQ D+ +M GI +VH KF+LM ETLYL + +
Sbjct: 194 VPP--NYMDNQQDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKK 251
Query: 47 ---------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------- 77
V DLI IS+ Y+R +L MEKLM L+F
Sbjct: 252 LQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPY 311
Query: 78 ------LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
L AAQSD KLE L+F++IEL LV+YE L++ PS L ASAIY A+CTL+
Sbjct: 312 VFMKRFLKAAQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAASAIYTAQCTLK 365
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 51/167 (30%)
Query: 9 FMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL-------------------- 46
+M Q D+ +M I +VH KFDLM ETL+L V L
Sbjct: 91 YMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGL 150
Query: 47 ---------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------- 77
V DLI I++ YTR +L MEKLML L++
Sbjct: 151 VAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRF 210
Query: 78 LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQ+D KLE +AF+L++LSLV+YE LKF PSL+ A+A+Y A+CT+
Sbjct: 211 LKAAQADKKLELVAFFLVDLSLVEYEMLKFPPSLVAAAAVYTAQCTV 257
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 51/167 (30%)
Query: 9 FMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL-------------------- 46
+M Q D+ +M I +VH KFDLM ETL+L V L
Sbjct: 197 YMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGL 256
Query: 47 ---------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------- 77
V DLI I++ YTR +L MEKLML L++
Sbjct: 257 VAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRF 316
Query: 78 LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQ+D KLE +AF+L++LSLV+YE LKF PSL+ A+A+Y A+CT+
Sbjct: 317 LKAAQADKKLELVAFFLVDLSLVEYEMLKFPPSLVAAAAVYTAQCTV 363
>sp|Q0D9C7|CCB22_ORYSJ Cyclin-B2-2 OS=Oryza sativa subsp. japonica GN=CYCB2-2 PE=1 SV=1
Length = 419
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 51/169 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------------- 46
N+M +Q DI +M GI +VH K +L+ ETL+L V +
Sbjct: 182 NYMLSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVG 241
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V+DLI I + YTR +L ME++++ L+F
Sbjct: 242 VTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRR 301
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
L AAQSD KLE ++F++IELSLV+YE LKF+PS+L A+AIY A+CT+
Sbjct: 302 FLKAAQSDKKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTIN 350
>sp|A2YH60|CCB22_ORYSI Cyclin-B2-2 OS=Oryza sativa subsp. indica GN=CYCB2-2 PE=1 SV=2
Length = 419
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 51/169 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------------- 46
N+M +Q DI +M GI +VH K +L+ ETL+L V +
Sbjct: 182 NYMLSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVG 241
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V+DLI I + YTR +L ME++++ L+F
Sbjct: 242 VTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRR 301
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
L AAQSD KLE ++F++IELSLV+YE LKF+PS+L A+AIY A+CT+
Sbjct: 302 FLKAAQSDKKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTIN 350
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 51/168 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTLS------------------ 47
++MS+Q DI +M I +VH KF+LM ETL+L V +
Sbjct: 174 DYMSSQGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKLQLVG 233
Query: 48 -----------------VKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V+DL+ IS+ YT+ +L MEKL+L L+F
Sbjct: 234 VTAMLLACKYEEVAVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRR 293
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQSD +L+ L+F+++ELSLV+Y+ LK++PSLL A+A+Y A+C L
Sbjct: 294 FLKAAQSDKQLQLLSFFILELSLVEYQMLKYRPSLLAAAAVYTAQCAL 341
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 51/168 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTLS------------------ 47
++MS+Q DI +M I +VH KF+LM ETL+L V +
Sbjct: 174 DYMSSQGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKLQLVG 233
Query: 48 -----------------VKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V+DL+ IS+ YT+ +L MEKL+L L+F
Sbjct: 234 VTAMLLACKYEEVAVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRR 293
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQSD +L+ L+F+++ELSLV+Y+ LK++PSLL A+A+Y A+C L
Sbjct: 294 FLKAAQSDKQLQLLSFFILELSLVEYQMLKYRPSLLAAAAVYTAQCAL 341
>sp|Q39070|CCB22_ARATH Cyclin-B2-2 OS=Arabidopsis thaliana GN=CYCB2-2 PE=2 SV=2
Length = 429
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 86/169 (50%), Gaps = 51/169 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTLS------------------ 47
++M+ Q DI+ +M I +VH KF+LM ETL+L V L
Sbjct: 192 DYMAQQFDISDKMRAILIDWLIEVHDKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVG 251
Query: 48 -----------------VKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V+DL+ IS+ YTR +L MEK+ML L+F
Sbjct: 252 LVALLLACKYEEVSVPIVEDLVVISDKAYTRTDVLEMEKIMLSTLQFNMSLPTQYPFLKR 311
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
L AAQSD KLE LA +LIEL+LV YE +++ PSLL A+A+Y A+CT+
Sbjct: 312 FLKAAQSDKKLEILASFLIELALVDYEMVRYPPSLLAATAVYTAQCTIH 360
>sp|Q39068|CCB21_ARATH Cyclin-B2-1 OS=Arabidopsis thaliana GN=CYCB2-1 PE=2 SV=2
Length = 429
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 84/168 (50%), Gaps = 51/168 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------------- 46
++M Q D+ +M I +VH KFDL+ ETL+L V L
Sbjct: 191 DYMMQQIDLNEKMRAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVG 250
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR------------ 77
V+DL+ IS+ YTR+ +L MEK ML L+F
Sbjct: 251 LVALLLACKYEEVSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKR 310
Query: 78 -LNAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQ+D K E LA +LIEL+LV+YE L+F PSLL A+++Y A+CTL
Sbjct: 311 FLKAAQADKKCEVLASFLIELALVEYEMLRFPPSLLAATSVYTAQCTL 358
>sp|Q9LM91|CCB25_ARATH Cyclin-B2-5 OS=Arabidopsis thaliana GN=CYCB2-5 PE=2 SV=2
Length = 265
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 14/92 (15%)
Query: 48 VKDLISISE-TYTRDHMLRMEKLMLKKLKFR-------------LNAAQSDTKLEHLAFY 93
V DLI IS+ Y+R +L MEKLM L+F L AAQSD KLE L+F+
Sbjct: 102 VDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFF 161
Query: 94 LIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
+IEL LV+YE L++ PS L ASAIY A+CTL+
Sbjct: 162 MIELCLVEYEMLEYLPSKLAASAIYTAQCTLK 193
>sp|Q0DH40|CCB15_ORYSJ Cyclin-B1-5 OS=Oryza sativa subsp. japonica GN=CYCB1-5 PE=3 SV=1
Length = 449
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 51/169 (30%)
Query: 8 NFMSNQTDITPQMIGICHS--CQVHLKFDLMAETLYL----------------------- 42
++MS+Q ++ P+M I VH KF+LM ETLYL
Sbjct: 217 DYMSSQVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVG 276
Query: 43 ------------MVTLSVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN---------- 79
M V+DLI + + Y+R H+L MEK +L +L++ +
Sbjct: 277 VAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLR 336
Query: 80 ---AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
AA D +LE++ F+ E++L +Y PSL+ ASA+Y A+CTL+
Sbjct: 337 FIKAAGGDKELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLK 385
>sp|Q0JIF2|CCB11_ORYSJ Cyclin-B1-1 OS=Oryza sativa subsp. japonica GN=CYCB1-1 PE=2 SV=2
Length = 449
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 56/174 (32%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYL--------------------MVT 45
+++ Q +I +M I +VH KF+LM ETLYL +V
Sbjct: 211 DYIDTQVEINSKMRAILADWIIEVHHKFELMPETLYLSMYVIDRYLSMQQVQRRELQLVG 270
Query: 46 LS---------------VKDLISISET-YTRDHMLRMEKLMLKKLKFRLNAA-------- 81
+S V D I IS++ YTR+ +L MEK +L KL++ L
Sbjct: 271 VSAMLIACKYEEIWAPEVNDFILISDSAYTREQILAMEKGILNKLQWNLTVPTAYVFIMR 330
Query: 82 ----------QSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
+SD ++EH+AF+ EL+L+QY + PS + ASA+Y AR TL+
Sbjct: 331 YLKAGASADNKSDKEMEHMAFFFAELALMQYGLVASLPSKVAASAVYAARLTLK 384
>sp|Q39069|CCB13_ARATH Cyclin-B1-3 OS=Arabidopsis thaliana GN=CYCB1-3 PE=2 SV=2
Length = 414
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 51/168 (30%)
Query: 9 FMSNQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVTL-------------------- 46
+M Q +I +M I I +VH+KFDL ETLYL V +
Sbjct: 179 YMHTQPEIDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGV 238
Query: 47 ---------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRL------------ 78
V DL+ +++ +Y +L MEK +L L++ L
Sbjct: 239 SALLIASKYEEIWPPQVNDLVYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRF 298
Query: 79 -NAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
A+ SD KLE+L +L EL L+ +++L F PS+L ASA+Y ARC L
Sbjct: 299 IKASGSDQKLENLVHFLAELGLMHHDSLMFCPSMLAASAVYTARCCLN 346
>sp|P25011|CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 OS=Glycine max PE=2 SV=1
Length = 454
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 51/168 (30%)
Query: 8 NFMSNQTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTL------------------- 46
+++ +Q +I +M I VH KF+L ETLYL + +
Sbjct: 213 DYIGSQPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRELQLVG 272
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLN---------- 79
V D + +S+ YT +H+L MEK +L KL++ L
Sbjct: 273 ISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEHILTMEKTILNKLEWTLTVPTPLVFLVR 332
Query: 80 ---AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
A+ D +L+++A +L EL ++ Y L + PS++ ASA+ ARCTL
Sbjct: 333 FIKASVPDQELDNMAHFLSELGMMNYATLMYCPSMVAASAVLAARCTL 380
>sp|Q39067|CCB12_ARATH Cyclin-B1-2 OS=Arabidopsis thaliana GN=CYCB1-2 PE=1 SV=2
Length = 445
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 51/168 (30%)
Query: 9 FMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVT-----LSVK------------ 49
+M QT++ +M I +VH+KF+L ETLYL V LSVK
Sbjct: 202 YMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGI 261
Query: 50 ------------------DLISISET-YTRDHMLRMEKLMLKKLKFRL------------ 78
DL+ +++ Y+ +L MEK +L L++ L
Sbjct: 262 SALLIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRF 321
Query: 79 -NAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
A+ SD ++E++ +L EL ++ Y+ L F PS+L ASA+Y ARC+L
Sbjct: 322 IKASMSDPEMENMVHFLAELGMMHYDTLTFCPSMLAASAVYTARCSLN 369
>sp|P25012|CCNB2_SOYBN G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max PE=2
SV=1
Length = 257
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 51/169 (30%)
Query: 8 NFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------------- 46
+++ +Q +I +M I VH KF+L ETLYL + +
Sbjct: 17 DYIDSQPEINERMRAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRRELQLVG 76
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLN---------- 79
V D + +S+ YT + +L MEK +L KL++ L
Sbjct: 77 ISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILAMEKTILNKLEWTLTVPTPFVFLVR 136
Query: 80 ---AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
AA D +LE++A ++ EL ++ Y L + PS++ ASA++ ARCTL
Sbjct: 137 FIKAAVPDQELENMAHFMSELGMMNYATLMYCPSMVAASAVFAARCTLN 185
>sp|Q0JNK6|CCB13_ORYSJ Cyclin-B1-3 OS=Oryza sativa subsp. japonica GN=CYCB1-3 PE=2 SV=2
Length = 470
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 51/173 (29%)
Query: 5 PMENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYL-------------------- 42
P+ +M +QT+I +M I +VH + LM ETLYL
Sbjct: 227 PLCTYMVSQTEINERMRAILTDWLIEVHYRLMLMPETLYLTVYIIDQYLSLENVPRKELQ 286
Query: 43 MVTLS---------------VKDLISISE-TYTRDHMLRMEKLMLKKLKFRL-------- 78
+V +S VKD + IS+ +++R +L EK +L KL++ L
Sbjct: 287 LVGVSAMLIACKYEETWAPLVKDFLVISDNSFSRQQVLSTEKSILNKLQWNLTVPTMYMF 346
Query: 79 -----NAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQM 126
AA D +LEH+ F+ EL+LVQY L F PS++ A+A+Y ARCTL +
Sbjct: 347 ILRYLKAALGDEELEHMTFFYAELALVQYSMLFFAPSVIAAAAVYAARCTLGL 399
>sp|P34800|CCN1_ANTMA G2/mitotic-specific cyclin-1 OS=Antirrhinum majus PE=2 SV=1
Length = 473
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 51/169 (30%)
Query: 8 NFMSNQTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTL------------------- 46
++M +Q +I +M I QVH KF+L ETLYL + +
Sbjct: 213 DYMGSQPEINEKMRAILIDWLVQVHHKFELSPETLYLTINIVDRYLASETTIRRELQLVG 272
Query: 47 ----------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRL----------- 78
V +L+ IS+ TY+ +L MEK +L L++ L
Sbjct: 273 IGAMLIASKYEEIWAPEVHELVCISDNTYSDKQILVMEKKILGALEWYLTVPTPYVFLVR 332
Query: 79 --NAAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
A+ +D+ +E++ ++L EL ++ Y L + PS++ A+++Y ARCTL
Sbjct: 333 FIKASMTDSDVENMVYFLAELGMMNYATLIYCPSMIAAASVYAARCTLN 381
>sp|P25010|CCNAL_DAUCA G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2
SV=1
Length = 341
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 56/185 (30%)
Query: 5 PMENFMSN-QTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTL--------------- 46
PM N++ Q D+T M G+ +V L++ L+ ETLYL ++
Sbjct: 93 PMMNYIEQVQKDVTSNMRGVLVDWLVEVSLEYKLLPETLYLAISYVDRYLSVNVLNRQKL 152
Query: 47 --------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLNAAQSDT 85
+V D + I++ TY++ +++ME +LK LKF + + T
Sbjct: 153 QLLGVSSFLIASKYEEIKPKNVADFVDITDNTYSQQEVVKMEADLLKTLKFEMGSPTVKT 212
Query: 86 -----------------KLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQMRY 128
K E LA YL ELSL+ Y L+F PSL+ AS ++AR T++
Sbjct: 213 FLGFIRAVQENPDVPKLKFEFLANYLAELSLLDYGCLEFVPSLIAASVTFLARFTIRPNV 272
Query: 129 TSYIV 133
+ +
Sbjct: 273 NPWSI 277
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 52/170 (30%)
Query: 8 NFMSNQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVT-----LSVK----------- 49
++M++Q DI +M I + VH++F+L ET YL V LSVK
Sbjct: 184 DYMASQPDINEKMRLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKELQLVG 243
Query: 50 -------------------DLISISE-TYTRDHMLRMEKLMLKKLKFRL----------- 78
DL+ I++ Y+ +L MEK +L L++ L
Sbjct: 244 LSALLMSAKYEEIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLAR 303
Query: 79 --NAAQSDTKLEHLAFYLIELSLVQYEA-LKFKPSLLCASAIYVARCTLQ 125
A+ +D K+E++ YL EL ++ Y+ + F PS++ ASAIY AR +L+
Sbjct: 304 FIKASIADEKMENMVHYLAELGVMHYDTMIMFSPSMVAASAIYAARSSLR 353
>sp|O48790|CCB14_ARATH Cyclin-B1-4 OS=Arabidopsis thaliana GN=CYCB1-4 PE=2 SV=1
Length = 387
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 53/173 (30%)
Query: 6 MENFMSNQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVTL----------------- 46
+++++ +Q +I +M I I VH KF+LM ETLYL + L
Sbjct: 147 IKDYIGSQPEINEKMRSILIDWLVDVHRKFELMPETLYLTINLVDRFLSLTMVHRRELQL 206
Query: 47 ------------------SVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN-------- 79
V D + IS+ Y R +L MEK +L ++++ +
Sbjct: 207 LGLGAMLIACKYEEIWAPEVNDFVCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFL 266
Query: 80 ------AAQSDTKLEHLAFYLIELSLVQYEALKF-KPSLLCASAIYVARCTLQ 125
A D ++E L FYL EL L+QY + +PS+L ASA+Y AR L+
Sbjct: 267 ARYVKAAVPCDAEMEKLVFYLAELGLMQYPIVVLNRPSMLAASAVYAARQILK 319
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
Length = 436
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 80/177 (45%), Gaps = 57/177 (32%)
Query: 5 PMENFMS-NQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVTLSVK------------ 49
P+ N+M Q DI P M I I +V + L+ +TLYL V L +
Sbjct: 189 PLANYMELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRL 248
Query: 50 DLISIS------------------------ETYTRDHMLRMEKLMLKKLKFRLN------ 79
L+ +S TYTR +L ME +L + FRL+
Sbjct: 249 QLLGVSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKT 308
Query: 80 -------AAQSDTK-----LEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
AAQ+ K LE+LA YL EL+LV+Y L+F PSL+ ASA+++AR TL
Sbjct: 309 FLRRFIKAAQASYKVPFIELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLARWTL 365
>sp|A0MEB5|CCA33_ARATH Cyclin-A3-3 OS=Arabidopsis thaliana GN=CYCA3-3 PE=2 SV=2
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 57/176 (32%)
Query: 3 LPPMENFMSN-QTDITPQMIGICHSCQVHL--KFDLMAETLYLMVT-----LSVK----- 49
L P+ +++ Q DITP G+ V + +F+L++ETLYL V+ LS+K
Sbjct: 73 LRPLHDYIEKIQEDITPSKRGVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEH 132
Query: 50 --DLISIS------------------------ETYTRDHMLRMEKLMLKKLKFRLN---- 79
L+ +S TYT+ +L+ME+ +L L+F L
Sbjct: 133 WLQLVGVSAMFIASKYEEKRRPKVEDFCYITANTYTKQDVLKMEEDILLALEFELGRPTT 192
Query: 80 ---------AAQSDTK-----LEHLAFYLIELSLVQYEALKFKPSLLCASAIYVAR 121
AQ D K LE L YL ELS++ Y +KF PSLL ASA+++AR
Sbjct: 193 NTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSMLDYSCVKFVPSLLAASAVFLAR 248
>sp|Q38819|CCA23_ARATH Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2
Length = 450
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 57/177 (32%)
Query: 5 PMENFMSN-QTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL--------------- 46
P+ +FM Q D+T M GI +V ++ L ++TLYL V L
Sbjct: 205 PLPDFMERIQKDVTQSMRGILVDWLVEVSEEYTLASDTLYLTVYLIDWFLHGNYVQRQQL 264
Query: 47 --------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFR-------- 77
+++ I++ TYTRD +L ME +LK F+
Sbjct: 265 QLLGITCMLIASKYEEISAPRIEEFCFITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKT 324
Query: 78 -----LNAAQSDT-----KLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
L AAQ+ ++E LA YL EL+L+ Y LKF PS++ ASA+++A+ T+
Sbjct: 325 FLRRFLRAAQASRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTM 381
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 56/180 (31%)
Query: 1 ELLPPMENFMSNQTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTLSVK--------- 49
E P + Q DI P M GI +V ++ L+++TLYL V L +
Sbjct: 193 EQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEK 252
Query: 50 ---DLISIS------------------------ETYTRDHMLRMEKLMLKKLKFRLN--- 79
L+ I+ TYTR +L ME +L L FRL+
Sbjct: 253 QKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPT 312
Query: 80 ----------AAQSDTK-----LEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
AAQ+ K +E+LA Y EL+L +Y L+F PSL+ ASA+++AR TL
Sbjct: 313 TKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLARWTL 372
>sp|P13952|CCNB_SPISO G2/mitotic-specific cyclin-B OS=Spisula solidissima PE=2 SV=1
Length = 428
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 52/165 (31%)
Query: 4 PPMENFMSNQTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTL--------------- 46
P N++ NQ +IT +M I CQVH +F L+ ETLYL V +
Sbjct: 185 PIRHNYLENQ-EITGKMRAILIDWLCQVHHRFHLLQETLYLTVAIIDRLLQESPVPRNKL 243
Query: 47 --------------------SVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN------ 79
V D + I++ YT+ +L ME+ +LKKL F
Sbjct: 244 QLVGVTSMLIASKYEEMYAPEVADFVYITDNAYTKKEILEMEQHILKKLNFSFGRPLCLH 303
Query: 80 -------AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAI 117
A Q D LA YL+EL++ +Y+ +++ PS + A+A+
Sbjct: 304 FLRRDSKAGQVDANKHTLAKYLMELTITEYDMVQYLPSKIAAAAL 348
>sp|Q9C968|CCA24_ARATH Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1
Length = 461
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 57/178 (32%)
Query: 5 PMENFMSN-QTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL--------------- 46
P +FM Q D+T M GI +V ++ L+ +TLYL V L
Sbjct: 214 PFPDFMEKTQRDVTETMRGILVDWLVEVSEEYTLVPDTLYLTVYLIDWFLHGNYVERQRL 273
Query: 47 --------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLNAAQSDT 85
+++ I++ TYTRD +L ME +LK F++ S T
Sbjct: 274 QLLGITCMLIASKYEEIHAPRIEEFCFITDNTYTRDQVLEMESQVLKHFSFQIYTPTSKT 333
Query: 86 ------------------KLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
++E LA YL EL+L+ Y LKF PS++ ASA+++A+ TL
Sbjct: 334 FLRRFLRAAQVSFPNQSLEMEFLANYLTELTLMDYPFLKFLPSIIAASAVFLAKWTLN 391
>sp|Q2QQ96|CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1
Length = 490
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 67/194 (34%)
Query: 5 PMENFMSN-QTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTL--------------- 46
P N+M Q DIT M GI +V ++ L+ +TLYL + L
Sbjct: 244 PRSNYMEALQRDITKGMRGILIDWLVEVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKL 303
Query: 47 --------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLN------ 79
V++ I++ TYT+ +L+ME L+L + F L+
Sbjct: 304 QLLGITSMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKT 363
Query: 80 -------AAQSDTK-----LEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQM- 126
AAQ+ L +LA YL EL+L+ Y LKF PS++ ASA+++AR TL
Sbjct: 364 FLRRFLRAAQASRNVPSITLGYLANYLAELTLIDYSFLKFLPSVVAASAVFLARWTLDQS 423
Query: 127 ---------RYTSY 131
YTSY
Sbjct: 424 DIPWNHTLEHYTSY 437
>sp|Q9C6A9|CCA32_ARATH Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1
Length = 372
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 57/174 (32%)
Query: 5 PMENFMSN-QTDITPQMIGICHSCQVHL--KFDLMAETLYLMVT-----LSVK------- 49
P+ +++ Q D+TP M G+ V + ++ L +ETLYL V+ LS+K
Sbjct: 121 PLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKL 180
Query: 50 DLISIS------------------------ETYTRDHMLRMEKLMLKKLKFRLN------ 79
L+ +S T+++ +++ME +L L+F L
Sbjct: 181 QLVGVSAMLIASKYEEISPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINT 240
Query: 80 -------AAQSDTKLEHLAF-----YLIELSLVQYEALKFKPSLLCASAIYVAR 121
AQ D K+ HL YL ELS++ Y+ +KF PSLL ASA+++AR
Sbjct: 241 FMRRFTRVAQDDFKVPHLQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLAR 294
>sp|P07818|CCNB_ARBPU G2/mitotic-specific cyclin-B OS=Arbacia punctulata PE=2 SV=1
Length = 409
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 51/171 (29%)
Query: 1 ELLPPMENFMSNQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVTL------------ 46
E++ P +T IT +M I + QVHL+F L+ ETL+L V L
Sbjct: 156 EMMVPANYLDRQETQITGRMRLILVDWLVQVHLRFHLLQETLFLTVQLIDRFLAEHSVSK 215
Query: 47 -----------------------SVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN--- 79
+ D + I++ YT+ + +ME MLK LK++L
Sbjct: 216 GKLQLVGVTAMFIASKYEEMYPPEINDFVYITDNAYTKAQIRQMEIAMLKGLKYKLGKPL 275
Query: 80 ----------AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVA 120
AA D + LA YL+E++L +Y +++ PS + A+AIY++
Sbjct: 276 CLHFLRRNSKAAGVDAQKHTLAKYLMEITLPEYSMVQYSPSEIAAAAIYLS 326
>sp|P42524|CCNB_DICDI G2/mitotic-specific cyclin-B OS=Dictyostelium discoideum GN=cycB
PE=1 SV=1
Length = 436
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 51/166 (30%)
Query: 7 ENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL------------------ 46
++++ NQ I +M I VH++F L++ET +L V +
Sbjct: 204 KDYIKNQYHINERMRAILVDWMMAVHVRFKLLSETFFLSVNIVDRYLAKVMIPVTKLQLV 263
Query: 47 -----------------SVKDLISISETY-TRDHMLRMEKLMLKKLKFRLN--------- 79
+KD + S+ T ++ ME+ +L L+F ++
Sbjct: 264 GITAILLACKYEEIYSPQIKDFVHTSDDACTHAEVIDMERQILSTLQFHMSVATPLHFLR 323
Query: 80 ----AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVAR 121
AA SD++ L+ YL ELS+V+Y ++F PS++ A++IYVAR
Sbjct: 324 RFSKAAGSDSRTHSLSKYLSELSMVEYRMVQFVPSMIAAASIYVAR 369
>sp|P47829|CG21_CANAX G2/mitotic-specific cyclin CYB1 OS=Candida albicans GN=CYB1 PE=2
SV=1
Length = 492
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 51/171 (29%)
Query: 5 PMENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL---------------- 46
P ++ QT + P+M I ++HLKF L+ E+L+L V +
Sbjct: 222 PDPQYLFKQTLLKPRMRSILVDWLVEMHLKFKLLPESLFLAVNVMDRFMSVEVVQIDKLQ 281
Query: 47 -------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLN------- 79
SVK+ ++ +YT + +++ EK ML L F LN
Sbjct: 282 LLATAALFTAAKNEEVFSPSVKNYAYFTDGSYTPEEVVQAEKYMLTILNFDLNYPNPMNF 341
Query: 80 ------AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
A D + L YL+E+++V Y+ + +PSL CASA+Y+AR L
Sbjct: 342 LRRISKADDYDVQSRTLGKYLLEITIVDYKFIGMRPSLCCASAMYLARLIL 392
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 57 TYTRDHMLRMEKLMLKKLKFRLNA-------------AQ-SDTK----LEHLAFYLIELS 98
TY RD +L ME +L LKF + A AQ SD LE LA Y+ ELS
Sbjct: 348 TYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELS 407
Query: 99 LVQYEALKFKPSLLCASAIYVARCTLQ 125
L++Y L + PSL+ ASAI++A+ LQ
Sbjct: 408 LLEYNLLSYPPSLVAASAIFLAKFILQ 434
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 57 TYTRDHMLRMEKLMLKKLKFRLNA-------------AQ-SDTK----LEHLAFYLIELS 98
TY RD +L ME +L LKF + A AQ SD LE LA Y+ ELS
Sbjct: 331 TYFRDEVLEMEASVLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELS 390
Query: 99 LVQYEALKFKPSLLCASAIYVARCTLQ 125
L++Y L + PSL+ ASAI++A+ LQ
Sbjct: 391 LLEYNLLSYPPSLVAASAIFLAKFILQ 417
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 54/171 (31%)
Query: 5 PMENFMSNQTDITPQMIGICHSC--QVHLKFDLMAETLYLMVTL---------------- 46
P N+M QTDI M I +V ++ L+ +TLYL V+
Sbjct: 182 PKSNYMRKQTDINSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKLQ 241
Query: 47 -------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLNA------ 80
V + + I++ TYT +LRME L+LK L F L+
Sbjct: 242 LVGAACMLVAAKFEEIYPPEVAEFVYITDDTYTAKQVLRMEHLILKTLAFDLSVPTCRDF 301
Query: 81 ---------AQSDTKLEHLAFYLIELSLVQYE-ALKFKPSLLCASAIYVAR 121
A+ +++L++LA YL EL+L+ + ++K+ PS++ AS+I VA
Sbjct: 302 LSRYLFAANAKPESQLKYLAEYLSELTLINCDISVKYAPSMIAASSICVAN 352
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 57 TYTRDHMLRMEKLMLKKLKFRLNA-------------AQ-SDTK----LEHLAFYLIELS 98
TY RD +L ME +L LKF + A AQ SD LE LA Y+ ELS
Sbjct: 318 TYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELS 377
Query: 99 LVQYEALKFKPSLLCASAIYVARCTLQ 125
L++Y L + PSL+ ASAI++A+ LQ
Sbjct: 378 LLEYNLLSYPPSLVAASAIFLAKFILQ 404
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 19/97 (19%)
Query: 48 VKDLISISE-TYTRDHMLRMEKLMLKKLKFRLNAAQSDT------------------KLE 88
V++L IS+ TYT+D +L+ME +LK LKF + A + LE
Sbjct: 182 VEELCYISDNTYTKDEVLKMEASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLE 241
Query: 89 HLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTLQ 125
LA Y+ ELSL++Y + + PSL+ AS+I++A+ L+
Sbjct: 242 FLANYIAELSLLEYSLICYVPSLIAASSIFLAKFILK 278
>sp|P24862|CCNB_PATVU G2/mitotic-specific cyclin-B OS=Patella vulgata PE=2 SV=1
Length = 408
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 52/161 (32%)
Query: 8 NFMSNQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVTL------------------- 46
NF+ Q ++T +M I I CQVH +F L+ ETLYL V++
Sbjct: 172 NFLEGQ-EVTGKMRSILIDWLCQVHHRFHLLQETLYLTVSIIDRFLQVHPISRNKLQLVG 230
Query: 47 ----------------SVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN---------- 79
V D + I++ YT+ + ME+ +LK L F
Sbjct: 231 VTSMLLASKYEEMYAPEVADFVYITDNAYTKADIRTMEQTILKTLDFSFGKPLCLHFLRR 290
Query: 80 ---AAQSDTKLEHLAFYLIELSLVQYEALKFKPSLLCASAI 117
A Q D LA YL+EL++++Y+ + PS++ A+A+
Sbjct: 291 NSKAGQVDATKHTLAKYLMELTIIEYDMVHCNPSIIAAAAL 331
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 19/96 (19%)
Query: 48 VKDLISISE-TYTRDHMLRMEKLMLKKLKFRLN-------------AAQSDTKL-----E 88
V+D I++ TY R+ +L ME +L LKF L AAQ ++ E
Sbjct: 276 VEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSE 335
Query: 89 HLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL 124
LA YL ELSL+ Y L++ PSL+ ASA+++A+ TL
Sbjct: 336 CLACYLTELSLLDYAMLRYAPSLVAASAVFLAQYTL 371
>sp|O77689|CCNB2_BOVIN G2/mitotic-specific cyclin-B2 OS=Bos taurus GN=CCNB2 PE=2 SV=2
Length = 398
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 56/166 (33%)
Query: 28 QVHLKFDLMAETLYL-----------------------------------MVTLSVKDLI 52
QVH KF L+ ETLY+ M + +++D +
Sbjct: 175 QVHSKFRLLQETLYMCVAVMDRYLQVQPVSRKKLQLVGITALLLASKYEEMFSPNIEDFV 234
Query: 53 SISET-YTRDHMLRMEKLMLKKLKFRLN-------------AAQSDTKLEHLAFYLIELS 98
I++ YT + ME L+LK+LKF L A + D + LA YL+EL+
Sbjct: 235 YITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVDVEQHTLAKYLMELT 294
Query: 99 LVQYEALKFKPSLLCASA-------IYVARCTLQMRYTSYIVDAEI 137
LV Y+ + + PS + A+A + + L+ +Y + ++E+
Sbjct: 295 LVDYDMVHYHPSKVAAAASCLSQKVLGQGKWNLKQQYYTGYTESEV 340
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 52/172 (30%)
Query: 5 PMENFMSNQTDITPQMIGICHS--CQVHLKFDLMAETLYLMVTLSVKDLISIS------- 55
P +M Q DIT M I +V ++ L ETL+L V + L S+S
Sbjct: 159 PKIGYMKKQPDITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQ 218
Query: 56 -----------------------------ETYTRDHMLRMEKLMLKKLKFRLNAA----- 81
+TY + +LRME L+LK L F L A
Sbjct: 219 LVGTAAMLLASKFEEIYPPEVAEFVYITDDTYNKKQVLRMEHLILKVLSFDLAAPTINQF 278
Query: 82 --------QSDTKLEHLAFYLIELSLVQYEA-LKFKPSLLCASAIYVARCTL 124
Q++ K+E L+ YL EL+L+ + LK+ PS++ A+A ++A T+
Sbjct: 279 LTQYFLHQQTNAKVESLSMYLGELTLIDADPYLKYLPSVIAAAAFHLASYTI 330
>sp|Q9FMH5|CCA31_ARATH Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1
Length = 355
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 56/165 (33%)
Query: 13 QTDITPQMIGICHSCQVHL--KFDLMAETLYLMVTL------------------------ 46
Q D+T M G+ V + ++ L+++TLYL V+
Sbjct: 113 QKDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSML 172
Query: 47 -----------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLNAAQSDT--------- 85
+V D I++ TYT+ +++ME +L L+F L S+T
Sbjct: 173 IASKYEEITPPNVDDFCYITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVA 232
Query: 86 ---------KLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVAR 121
++E L YL ELS++ Y+++KF PS + ASA+++AR
Sbjct: 233 QEDFEMSHLQMEFLCSYLSELSMLDYQSVKFLPSTVAASAVFLAR 277
>sp|P30276|CCNB2_MOUSE G2/mitotic-specific cyclin-B2 OS=Mus musculus GN=Ccnb2 PE=2 SV=2
Length = 398
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 56/166 (33%)
Query: 28 QVHLKFDLMAETLYL-----------------------------------MVTLSVKDLI 52
QVH KF L+ ETLY+ M + +++D +
Sbjct: 175 QVHSKFRLLQETLYMCIAIMDRFLQAQLVCRKKLQLVGITALLLASKYEEMFSPNIEDFV 234
Query: 53 SISET-YTRDHMLRMEKLMLKKLKFRLN-------------AAQSDTKLEHLAFYLIELS 98
I++ YT + ME L+LK+LKF L A + D + LA YL+EL+
Sbjct: 235 YITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVDVEQHTLAKYLMELT 294
Query: 99 LVQYEALKFKPSLLCASA-------IYVARCTLQMRYTSYIVDAEI 137
LV Y+ + + PS + A+A + + L+ +Y + +++E+
Sbjct: 295 LVDYDMVHYHPSQVAAAASCLSQKVLGQGKWNLKQQYYTGYMESEV 340
>sp|P37883|CCNB2_MESAU G2/mitotic-specific cyclin-B2 OS=Mesocricetus auratus GN=CCNB2 PE=2
SV=1
Length = 397
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 57/162 (35%)
Query: 28 QVHLKFDLMAETLYL-----------------------------------MVTLSVKDLI 52
QVH KF L+ ETLY+ M + +++D +
Sbjct: 174 QVHSKFRLLQETLYMCIAIMDRFLQAQPVCRKKLQLVGITALLLASKYEEMFSPNIEDFV 233
Query: 53 SISET-YTRDHMLRMEKLMLKKLKFRLN-------------AAQSDTKLEHLAFYLIELS 98
I++ YT + ME L+LK+LKF L A + D + LA YL+EL+
Sbjct: 234 YITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEVDVEQHTLAKYLMELT 293
Query: 99 LVQYEALKFKPSLLCASAIYVARCTL--------QMRYTSYI 132
L+ Y+ + + PS + A+A +++ L Q YT Y+
Sbjct: 294 LIDYDMVHYHPSQVAAAASCLSQKVLGQGKWNLKQQYYTGYM 335
>sp|O95067|CCNB2_HUMAN G2/mitotic-specific cyclin-B2 OS=Homo sapiens GN=CCNB2 PE=1 SV=1
Length = 398
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 59/176 (33%)
Query: 15 DITPQMIGICHS--CQVHLKFDLMAETLYL------------------------------ 42
DI +M I QVH KF L+ ETLY+
Sbjct: 160 DINGRMRAILVDWLVQVHSKFRLLQETLYMCVGIMDRFLQVQPVSRKKLQLVGITALLLA 219
Query: 43 -----MVTLSVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN-------------AAQS 83
M + +++D + I++ YT + ME L+LK+LKF L A +
Sbjct: 220 SKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEV 279
Query: 84 DTKLEHLAFYLIELSLVQYEALKFKPSLLCASAIYVARCTL--------QMRYTSY 131
D + LA YL+EL+L+ Y+ + + PS + A+A +++ L Q YT Y
Sbjct: 280 DVEQHTLAKYLMELTLIDYDMVHYHPSKVAAAASCLSQKVLGQGKWNLKQQYYTGY 335
>sp|P78396|CCNA1_HUMAN Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1
Length = 465
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 52/176 (29%)
Query: 5 PMENFMSNQTDITPQM--IGICHSCQVHLKFDLMAETLYLMVTL---------------- 46
P ++M Q DIT M I + +V ++ L AETLYL V
Sbjct: 228 PKAHYMKKQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQ 287
Query: 47 -------------------SVKDLISISE-TYTRDHMLRMEKLMLKKLKFRLNAAQSD-- 84
V + + I++ TYT+ +L+ME L+LK L F L ++
Sbjct: 288 LVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQF 347
Query: 85 -----------TKLEHLAFYLIELSLVQYEA-LKFKPSLLCASAIYVARCTLQMRY 128
+ E+LA Y+ ELSL++ + LK+ PSL+ A+A +A T+ +
Sbjct: 348 LLQYLRRQGVCVRTENLAKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTVNKHF 403
>sp|Q4R7A8|CCNB2_MACFA G2/mitotic-specific cyclin-B2 OS=Macaca fascicularis GN=CCNB2 PE=2
SV=1
Length = 398
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 51/153 (33%)
Query: 15 DITPQMIGICHS--CQVHLKFDLMAETLYLMVTL-------------------------- 46
DI +M I QVH KF L+ ETLY+ V +
Sbjct: 160 DINGRMRAILVDWLVQVHSKFRLLQETLYMCVAIMDRFLQVQPVSRKKLQLVGITALLLA 219
Query: 47 ---------SVKDLISISET-YTRDHMLRMEKLMLKKLKFRLN-------------AAQS 83
+++D + I++ YT + ME L+LK+LKF L A +
Sbjct: 220 SKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRRASKAGEV 279
Query: 84 DTKLEHLAFYLIELSLVQYEALKFKPSLLCASA 116
D + LA YL+EL+L+ Y+ + + PS + A+A
Sbjct: 280 DVEQHTLAKYLMELTLIDYDMVHYHPSKVAAAA 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,034,159
Number of Sequences: 539616
Number of extensions: 1300830
Number of successful extensions: 3745
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 3515
Number of HSP's gapped (non-prelim): 196
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)