Query 047165
Match_columns 605
No_of_seqs 151 out of 194
Neff 3.9
Searched_HMMs 46136
Date Fri Mar 29 08:21:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047165.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047165hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05346 DUF747: Eukaryotic me 100.0 5E-101 1E-105 795.2 28.5 307 289-596 3-332 (332)
2 KOG2490 Predicted membrane pro 100.0 2.3E-96 5E-101 784.0 12.8 367 212-589 56-452 (601)
3 KOG2490 Predicted membrane pro 100.0 6.3E-33 1.4E-37 298.0 4.3 509 19-605 1-601 (601)
4 KOG3609 Receptor-activated Ca2 56.9 40 0.00087 40.6 8.4 62 352-423 553-616 (822)
5 PF12564 TypeIII_RM_meth: Type 27.0 27 0.00059 29.1 0.6 31 405-437 1-31 (57)
6 KOG2422 Uncharacterized conser 23.6 53 0.0012 38.5 2.3 13 244-256 279-291 (665)
7 KOG3571 Dishevelled 3 and rela 23.2 46 0.001 38.4 1.7 17 349-365 424-440 (626)
8 PF06947 DUF1290: Protein of u 20.6 1.1E+02 0.0023 27.9 3.1 25 244-268 1-25 (88)
9 PHA03249 DNA packaging tegumen 20.0 1.8E+02 0.0038 34.5 5.4 34 320-353 317-350 (653)
10 PF14293 YWFCY: YWFCY protein 17.0 71 0.0015 27.2 1.1 12 9-20 26-37 (61)
No 1
>PF05346 DUF747: Eukaryotic membrane protein family; InterPro: IPR008010 This family is a family of eukaryotic membrane proteins. It was previously annotated as including a putative receptor for human cytomegalovirus gH [] but this has has since been disputed []. Analysis of the mouse Tapt1 protein (transmembrane anterior posterior transformation 1) has shown it to be involved in patterning of the vertebrate axial skeleton.
Probab=100.00 E-value=5.4e-101 Score=795.22 Aligned_cols=307 Identities=41% Similarity=0.688 Sum_probs=281.5
Q ss_pred CCCChhhHhhhhHHHHHHHHHHHhcccchhhhhheecccccchhhhHHHHHHHHHHHHHhhchhHHHHHhhhhcccccCc
Q 047165 289 IRPSAAELCDFACFVVLACAVTLLEGTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLCQSFGGDVLQTLFNSAEGLANCT 368 (605)
Q Consensus 289 ~r~s~~e~~Dll~~lili~~v~iL~~~D~S~iYH~IRgQs~IKLYVifNmLEV~DKL~sSfGqDiLd~Lf~s~~~l~~~~ 368 (605)
+|.+++|++|+++++++++++++++++|+|++||+||||++|||||+||||||+||||||||||++|+|+|++++..+.+
T Consensus 3 ~~l~~~~~~Dll~~~ii~~~~~~l~~~D~S~~YH~IRgQs~IKLYvifn~LEv~DkL~sSfGqDild~L~~~~~~~~~~~ 82 (332)
T PF05346_consen 3 RRLSRAQICDLLKGFIILICVIILSYVDTSRMYHYIRGQSVIKLYVIFNMLEVADKLCSSFGQDILDSLFWSATLPRRSD 82 (332)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccccCC
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999976432222
Q ss_pred c--cchhHHHHHHHHHHHHHHHHHH--HHHHhhhheeeccchhHHHHHHHhhhhhhhhcccccccCCCchhhhhhhhhHH
Q 047165 369 E--ENMRFWIWRFISDQALAMAATN--ILIAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRFSKDNIHSLVYADSIE 444 (605)
Q Consensus 369 ~--~~~r~~~~~fi~~~~l~v~~sl--l~Q~iTLNVAiNS~~naLLtLLiSNnFvEIKsSVFKKfdKenLFQitcsDivE 444 (605)
. ...+ .+.+++...+|.++|++ ++|++|||||+|||+|||||||+||||+|||||||||||||||||++|||++|
T Consensus 83 ~~~~~~~-~~~~~~~a~~yv~~Hs~vll~q~vtLNVAiNS~~naLLtLLiSnnF~EiKssVFKKf~kenLFQi~caDivE 161 (332)
T PF05346_consen 83 SKRNHLR-FILHFILAVIYVFLHSLVLLYQAVTLNVAINSYSNALLTLLISNNFVEIKSSVFKKFDKENLFQITCADIVE 161 (332)
T ss_pred cchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccHHHHHHHHHHHHHHHHHHhhcccccchHHHHhhHHHH
Confidence 2 2222 35677888888888874 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhhc----CCchhhhhhhhHHHHHHHHHHHHHHHHHHhhhcCCChhhHHHHHHHHHHHHhh---
Q 047165 445 RFHISAFLLFVLAQNILEAE----GPWFESFLFNALLVFVCEMLIDIIKHSFLAKFNDIKPIAYSEFLEDLCKQTLN--- 517 (605)
Q Consensus 445 RFqL~l~L~iI~lrNm~e~~----~~w~~s~l~~~~~Vl~sEvlVDwiKHAFItKFN~Irp~vY~~f~~~L~~D~~~--- 517 (605)
|||++++|++|++|||.|.+ ++|..++++|+++|+|+||+|||+|||||+|||+|||++|++|+++||+|++.
T Consensus 162 RFql~l~L~iI~lrn~~~~~~~~~~~~~~~~~~~~~~V~~sEvlVDwiKHafItKFN~I~p~vY~~f~~~L~~D~~~~~~ 241 (332)
T PF05346_consen 162 RFQLLLFLFIIALRNMSEYSSNLPNSWFISLLGPVLMVLGSEVLVDWIKHAFITKFNRIRPSVYREFLDILCKDLLSSRQ 241 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchHHHHhhCHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999973 46777899999999999999999999999999999999999999999999983
Q ss_pred ------------ccCccccCCCCccccchhhhHHHhHHHhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047165 518 ------------MQTENGKKNLTFVPLAPACVVIRVLTPVFAARLPCTPLPWRLFWILLLSAMTYVMLASLKVMIGMGLQ 585 (605)
Q Consensus 518 ------------~~s~~~~r~LgFiPLp~a~vviRv~~~~~~~~~p~~~~~~~~~~~l~l~~~~f~~Lv~lKlllg~~Ll 585 (605)
++++...||+||+|+|+||+++|++.|++....++++.+|...+.+++++++|++|+++|+++|++|+
T Consensus 242 ~~~~~~~~~~~~~~s~~~~rRlGf~~lpla~l~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Kill~~~L~ 321 (332)
T PF05346_consen 242 SNRLIVSCKAFLDQSHKVSRRLGFPPLPLACLFIRMLYPTYKMLLSSSPLLWSIFSSILLLLLAFLILVLLKILLGILLL 321 (332)
T ss_pred cccccccccccccchhhHHHHcCCCCcchHHeeeehhHhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999988887777888888888899999999999999999999
Q ss_pred HHHHHHHHHHh
Q 047165 586 RHATWYVKRCQ 596 (605)
Q Consensus 586 ~~A~~~v~~~~ 596 (605)
++|+++++++|
T Consensus 322 ~~a~~~~~~~k 332 (332)
T PF05346_consen 322 GWACRRVKRMK 332 (332)
T ss_pred HHHHHHHHhcC
Confidence 99999999876
No 2
>KOG2490 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=2.3e-96 Score=783.96 Aligned_cols=367 Identities=29% Similarity=0.432 Sum_probs=313.3
Q ss_pred HHHHhhhcCCCCCCCccccchhHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-----hh-
Q 047165 212 YFMEEMYTGNSLQSTTTLGDEKERQRVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTIMPTRILLTLWRLL-----HT- 285 (605)
Q Consensus 212 yl~~El~~g~sl~~~~~~~~e~~rervyn~~l~IP~~lEklm~fG~l~ClDsFLy~fTiLPLRi~~a~~rll-----~~- 285 (605)
++++|+++||+++.+++. ++.+|.++|| |+++|..+||||.||+++|.|||||+||+||+|++++.|.+. +.
T Consensus 56 ~~q~e~t~~ys~~e~~d~-~s~~~~~v~n-FlriP~~lErf~~yG~~~s~DsFlYifTlLPiR~v~~~~~~~~f~~lR~~ 133 (601)
T KOG2490|consen 56 KKQKEVTRGYSLEEDEDR-YSTIRTKVYN-FLRIPTMLERFMLYGLLQSGDSFLYIFTLLPIRFVMSNFFLFYFQELRIR 133 (601)
T ss_pred HHHHHHHHhhHHhhcccc-hhHHHHHHHH-HhhhHHHHHHHHHHhhhhccccceEEEEecchHHHHHHHHHHHhhhhhee
Confidence 445777888888777654 4566779997 789999999999999999999999999999999999998752 11
Q ss_pred ----cccCCCChhhHhhhhHHHHHHHHHHHhcccchhhhhheecccccchhhhHHHHHHHHHHHHHhhchhHHHHHhhhh
Q 047165 286 ----RQFIRPSAAELCDFACFVVLACAVTLLEGTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLCQSFGGDVLQTLFNSA 361 (605)
Q Consensus 286 ----r~~~r~s~~e~~Dll~~lili~~v~iL~~~D~S~iYH~IRgQs~IKLYVifNmLEV~DKL~sSfGqDiLd~Lf~s~ 361 (605)
.+-+|.+++|.||+++.++++++.+++..+|+|++||.||.|++||||+.||||||+|||||++|||++|+|+|++
T Consensus 134 ~~~~s~~~~l~~~e~~d~lk~~ii~sssill~~iDtS~lYH~iksQ~~iklYi~yn~LEiaDrl~~aLGQD~ld~L~w~~ 213 (601)
T KOG2490|consen 134 RVNGSKNKRLTSAEGCDLLKWVIIVSSSILLRKIDTSRLYHIIKSQSFIKLYILYNVLEIADRLLSALGQDTLDALFWTA 213 (601)
T ss_pred eeccCCCCCCChhhhcchhheeeeeehhHHHHHhhhhhhhhhhccCceeEEEEeecHHHHHHHHHHHhcccHHHHHHHhc
Confidence 1224667899999999999988889999999999999999999999999999999999999999999999999987
Q ss_pred cccccCcccchhHHHHHHHHHHHHHHHHH--HHHHHhhhheeeccchhHHHHHHHhhhhhhhhcccccccCCCchhhhhh
Q 047165 362 EGLANCTEENMRFWIWRFISDQALAMAAT--NILIAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRFSKDNIHSLVY 439 (605)
Q Consensus 362 ~~l~~~~~~~~r~~~~~fi~~~~l~v~~s--ll~Q~iTLNVAiNS~~naLLtLLiSNnFvEIKsSVFKKfdKenLFQitc 439 (605)
..-.+..++..--...++...++|+.+|+ ++||++|||||+|||+|++||||+|||||||||+|||||||+|||||+|
T Consensus 214 ~~~~nf~p~~fl~~~~~~~msl~Y~~lH~~vll~QattLNVavNS~~~tlL~llmSnqfVElKgsVFKKFdK~nLFQitc 293 (601)
T KOG2490|consen 214 NSEKNFWPADFLSACTHVPMSLFYVTLHGGVLLYQATTLNVAVNSYSNTLLTLLMSNQFVELKGSVFKKFDKENLFQITC 293 (601)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhHHHhhhhheeeeEeecchhHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHH
Confidence 54333333222112345666778888887 3789999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHhhc-CCch---------hhhhhhhHHHHHHHHHHHHHHHHHHhhhcCCChhhHHHHHH
Q 047165 440 ADSIERFHISAFLLFVLAQNILEAE-GPWF---------ESFLFNALLVFVCEMLIDIIKHSFLAKFNDIKPIAYSEFLE 509 (605)
Q Consensus 440 sDivERFqL~l~L~iI~lrNm~e~~-~~w~---------~s~l~~~~~Vl~sEvlVDwiKHAFItKFN~Irp~vY~~f~~ 509 (605)
+||+||||+.++|+|+++|||-+.. ..|. ..+++|++.|+|+|++|||.|||||||||+|+|+||++|+.
T Consensus 294 sDV~ERF~ltvllfIv~lrnm~~~~~~~w~~~~~~~~~l~~l~~~~f~VvgsE~lvDW~KHAfITkFN~I~~~IY~~fT~ 373 (601)
T KOG2490|consen 294 SDVVERFHLTVLLFIVLLRNMPERVLLIWSDAFKNIKYLNNLCGPQFRVVGSEELVDWAKHAFITKFNEIYPSIYGQFTI 373 (601)
T ss_pred HHHHhHhhHHHHHHHHHHHhhHHHHHHhhcchhhhHHHHHHhcccceeeccHHHHHHHHHHHHHHHHhhcCHHHhcceeE
Confidence 9999999999999999999998864 1254 23578899999999999999999999999999999999999
Q ss_pred HHHHHHhh--------ccCccccCCCCccccchhhhHHHhHHHhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047165 510 DLCKQTLN--------MQTENGKKNLTFVPLAPACVVIRVLTPVFAARLPCTPLPWRLFWILLLSAMTYVMLASLKVMIG 581 (605)
Q Consensus 510 ~L~~D~~~--------~~s~~~~r~LgFiPLp~a~vviRv~~~~~~~~~p~~~~~~~~~~~l~l~~~~f~~Lv~lKlllg 581 (605)
.||.|+.. +.++.++|||||+|||++|+.+|+..++.... +..+|. +..++|+...++++.++
T Consensus 374 ~l~~Dy~~tr~t~tlsdcsdqVarRmG~~plPL~vv~i~a~~qt~sf~---~~~~~~------i~~l~~~~~~~~~i~~~ 444 (601)
T KOG2490|consen 374 KLYVDYNATRETHTLSDCSDQVARRMGFIPLPLLVVLIRAEIQTSSFK---RSSKSN------IFGLAYLLSMGFHICLF 444 (601)
T ss_pred EEEeehhhhhhhhhhccchHHHHHHcCCCcchhHHHHHHhhheehhhh---ccchHH------HHHHHHHHHHHhHHHHH
Confidence 99999763 34667899999999999999999998876431 222333 34678888899999999
Q ss_pred HHHHHHHH
Q 047165 582 MGLQRHAT 589 (605)
Q Consensus 582 ~~Ll~~A~ 589 (605)
++.++.||
T Consensus 445 ~v~~~~~~ 452 (601)
T KOG2490|consen 445 LVSLLAAC 452 (601)
T ss_pred HHHHHhhc
Confidence 99999998
No 3
>KOG2490 consensus Predicted membrane protein [Function unknown]
Probab=99.97 E-value=6.3e-33 Score=298.01 Aligned_cols=509 Identities=36% Similarity=0.490 Sum_probs=410.9
Q ss_pred hccccCCceeeeeeccccccchhhhhhccccccCCCCCCCccccCChh---hhhhhhhhccCCCCCccccccCCCCCCcc
Q 047165 19 MGLRSSGRKLSFDILSEAASVEDAADSRLFRRSNSLPTHRHTEVSMPK---NRKRKKHKKKKQSSPDFAVISEDPVSDSN 95 (605)
Q Consensus 19 m~~r~~~~~~sf~~l~~~~~~~~~~~~~~~~rs~~~~~~~~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 95 (605)
|+.|+.|+|+||+..++....+| +++.+||+.++|+..++..++|+ .|+|-+|+|++. ......+|+.|.+|.
T Consensus 1 ~s~~s~~k~~s~s~~~~~~~~~~--~~ts~~~~~s~~s~~~~~~~~~~~~~~r~~~~~~q~e~--t~~ys~~e~~d~~s~ 76 (601)
T KOG2490|consen 1 MSIRSSGKKLSFSIDSQKSVIEN--DRTSSPRSSSDPSTGNVASEFPDDYIKRKRSSKKQKEV--TRGYSLEEDEDRYST 76 (601)
T ss_pred CCccccCCcchhhhhhccccccc--cccCCCcCCCCCccccccccCcccccccchhHHHHHHH--HHhhHHhhcccchhH
Confidence 78899999999999999999999 89999999999999999999998 677777777665 445556888888998
Q ss_pred cccc-----ccceeeccccccccccccCCcccce---eEEeecc----ccccccccccccccccccccCCCc-------c
Q 047165 96 AESA-----ASGVVFGNRSDANCQSYVASVCASS---TITVAAA----ENGYNNIINNGGELRQRNVAGNDE-------A 156 (605)
Q Consensus 96 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~~~----~~~~~~~~~~~~~lrqr~v~~~~~-------~ 156 (605)
+++- ....++| +-.+ |+..+||.| +.|+++. +.|++- -+++||+|.++|++. +
T Consensus 77 ~~~~v~nFlriP~~lE-rf~~----yG~~~s~DsFlYifTlLPiR~v~~~~~~~---~f~~lR~~~~~~s~~~~l~~~e~ 148 (601)
T KOG2490|consen 77 IRTKVYNFLRIPTMLE-RFML----YGLLQSGDSFLYIFTLLPIRFVMSNFFLF---YFQELRIRRVNGSKNKRLTSAEG 148 (601)
T ss_pred HHHHHHHHhhhHHHHH-HHHH----HhhhhccccceEEEEecchHHHHHHHHHH---HhhhhheeeeccCCCCCCChhhh
Confidence 7752 2344455 2223 566666666 7788776 555521 379999999999742 2
Q ss_pred ccc--------------hhhhhhhh-----h-------hhcccccCCchhccc--hhhhhhhHHHHhhhC--C-CCCCCC
Q 047165 157 ESR--------------EEEISVEK-----Q-------QQRSSEANGSVVTKL--ETAESLDWKRLMAED--P-NYMYPA 205 (605)
Q Consensus 157 ~~~--------------~~~~~~~~-----~-------~~~~~e~~~~~~~~l--~~~~Sl~~~~~~~~~--~-~~~~~~ 205 (605)
-.. ..|.+..- | .+...|+++.....| |+..+|.|++..+.+ | ..++.-
T Consensus 149 ~d~lk~~ii~sssill~~iDtS~lYH~iksQ~~iklYi~yn~LEiaDrl~~aLGQD~ld~L~w~~~~~~nf~p~~fl~~~ 228 (601)
T KOG2490|consen 149 CDLLKWVIIVSSSILLRKIDTSRLYHIIKSQSFIKLYILYNVLEIADRLLSALGQDTLDALFWTANSEKNFWPADFLSAC 228 (601)
T ss_pred cchhheeeeeehhHHHHHhhhhhhhhhhccCceeEEEEeecHHHHHHHHHHHhcccHHHHHHHhcccccccchHHHHHHH
Confidence 211 24444321 2 567789999999999 999999999888876 4 223344
Q ss_pred CCChhhHHHHhhhcCCCCCCCccccchhHHHHHHHhhhcccHHHHHHH----------------------HHHHHHHHHH
Q 047165 206 ETSPLKYFMEEMYTGNSLQSTTTLGDEKERQRVYDTIFRLPWRCELLI----------------------DVGFFVCFDS 263 (605)
Q Consensus 206 ~~s~~~yl~~El~~g~sl~~~~~~~~e~~rervyn~~l~IP~~lEklm----------------------~fG~l~ClDs 263 (605)
...+++++++++++|-.+-+.+. .+ .++++.+|+.+.+|+..|--= .=+|.+|+-.
T Consensus 229 ~~~~msl~Y~~lH~~vll~Qatt-LN-VavNS~~~tlL~llmSnqfVElKgsVFKKFdK~nLFQitcsDV~ERF~ltvll 306 (601)
T KOG2490|consen 229 THVPMSLFYVTLHGGVLLYQATT-LN-VAVNSYSNTLLTLLMSNQFVELKGSVFKKFDKENLFQITCSDVVERFHLTVLL 306 (601)
T ss_pred HHHHHHHHHHHHHhHHHhhhhhe-ee-eEeecchhHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHHHhHhhHHHHH
Confidence 57889999999999988888766 34 788999999999999765322 2256778889
Q ss_pred HHHHhhHHHHHHHHHHHH----------HHhhcccCCCChhhHhhhhHHHHHHHHHHHhcccchhhhhheecccccchhh
Q 047165 264 FLSLLTIMPTRILLTLWR----------LLHTRQFIRPSAAELCDFACFVVLACAVTLLEGTDISLIYHMIRGQGTIKLY 333 (605)
Q Consensus 264 FLy~fTiLPLRi~~a~~r----------ll~~r~~~r~s~~e~~Dll~~lili~~v~iL~~~D~S~iYH~IRgQs~IKLY 333 (605)
|+.+.+-||.+... +|. -+..+++.++..+++-|+++-+.+ ++.+.|||.|+||.+||||
T Consensus 307 fIv~lrnm~~~~~~-~w~~~~~~~~~l~~l~~~~f~VvgsE~lvDW~KHAfI---------TkFN~I~~~IY~~fT~~l~ 376 (601)
T KOG2490|consen 307 FIVLLRNMPERVLL-IWSDAFKNIKYLNNLCGPQFRVVGSEELVDWAKHAFI---------TKFNEIYPSIYGQFTIKLY 376 (601)
T ss_pred HHHHHHhhHHHHHH-hhcchhhhHHHHHHhcccceeeccHHHHHHHHHHHHH---------HHHhhcCHHHhcceeEEEE
Confidence 99999999999865 443 123467888999999998754322 4778999999999999999
Q ss_pred hHHHH-HHHHHHHHHhhchhHHHHHhhhhcccccCcccchhHHHHHHHHHHHHHHHHHHHHHHhhhheeeccchhHHHHH
Q 047165 334 VVYNV-LEIFDKLCQSFGGDVLQTLFNSAEGLANCTEENMRFWIWRFISDQALAMAATNILIAITLSTCIVAHNNALLAL 412 (605)
Q Consensus 334 VifNm-LEV~DKL~sSfGqDiLd~Lf~s~~~l~~~~~~~~r~~~~~fi~~~~l~v~~sll~Q~iTLNVAiNS~~naLLtL 412 (605)
+-||. .| +..++.|+..-. --.++..|.|
T Consensus 377 ~Dy~~tr~--------------------t~tlsdcsdqVa------------------------------rRmG~~plPL 406 (601)
T KOG2490|consen 377 VDYNATRE--------------------THTLSDCSDQVA------------------------------RRMGFIPLPL 406 (601)
T ss_pred eehhhhhh--------------------hhhhccchHHHH------------------------------HHcCCCcchh
Confidence 99983 21 112334432210 0156789999
Q ss_pred HHhhhhhhhhcccccccCCCchhhhhhhhhHHHHHHHHHHHHHHHHH--hHhhcCCchhhhhhhhHHHHHHHHHHH----
Q 047165 413 LVSNNFAEIKSNVFKRFSKDNIHSLVYADSIERFHISAFLLFVLAQN--ILEAEGPWFESFLFNALLVFVCEMLID---- 486 (605)
Q Consensus 413 LiSNnFvEIKsSVFKKfdKenLFQitcsDivERFqL~l~L~iI~lrN--m~e~~~~w~~s~l~~~~~Vl~sEvlVD---- 486 (605)
+++++++|+|.++||++++.++|.++.+|..+ ||.+++++.....+ ..+.++-|.+-...+.-.|.++|++.|
T Consensus 407 ~vv~i~a~~qt~sf~~~~~~~i~~l~~~~~~~-~~i~~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~n~~~m~~~~ft 485 (601)
T KOG2490|consen 407 LVVLIRAEIQTSSFKRSSKSNIFGLAYLLSMG-FHICLFLVSLLAACEAILESEGAWKGNEIYNATTVFNCEMMSDLFFT 485 (601)
T ss_pred HHHHHHhhheehhhhccchHHHHHHHHHHHHH-hHHHHHHHHHHhhcchhhhhhHHhhhhhhhhccccCCCchhhhhHHH
Confidence 99999999999999999999999999999999 99999999888888 777777787777777778888999998
Q ss_pred HHHHHHHhhhcCCChhhHHHHHHHHHHHHhhccCccccCCCCccccchhhhHHHhHHHhhhhcCCCCCCchHHHHHHHHH
Q 047165 487 IIKHSFLAKFNDIKPIAYSEFLEDLCKQTLNMQTENGKKNLTFVPLAPACVVIRVLTPVFAARLPCTPLPWRLFWILLLS 566 (605)
Q Consensus 487 wiKHAFItKFN~Irp~vY~~f~~~L~~D~~~~~s~~~~r~LgFiPLp~a~vviRv~~~~~~~~~p~~~~~~~~~~~l~l~ 566 (605)
.++|.+.+++|.|.|..|+++.+.+|.+-+...++.+.....+.|..++|+..|++.|.+..+.|++|.||. +|....-
T Consensus 486 ~il~~~laG~~~i~~Iass~~~~sl~eqEl~i~te~~~~~~~~~~~~~~~~~~r~l~~~~s~~~~~~~~p~~-~l~t~~~ 564 (601)
T KOG2490|consen 486 IILHSLLAGGFDIKDIASSEFLQSLCEQELRIRTEDRKTNLTLFPRSDAEVDIRVLNPVYSAHLPDSPLPQS-LLMTILR 564 (601)
T ss_pred HHhcccccCCCccchhhHhHHHHHHHHhhhcCChhhhhhhhccccCCcccccccccChhhhcCCCCCCCChH-HHHhHHH
Confidence 999999999999999999999999999999999999988889999999999999999999999999999999 6777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 047165 567 AMTYVMLASLKVMIGMGLQRHATWYVKRCQKRKHHLHFD 605 (605)
Q Consensus 567 ~~~f~~Lv~lKlllg~~Ll~~A~~~v~~~~~~~~~~~~~ 605 (605)
++++.....+|+..| +..+.|+|++++|++|+.- |+|
T Consensus 565 ~~~~~~~~~~~~~a~-~kkkt~~~p~~~~~r~ns~-~~s 601 (601)
T KOG2490|consen 565 VITYSKRISLKVLAG-GKKKTATWPINRCRRRNSS-HNS 601 (601)
T ss_pred HHHHhhcchhhhhhc-cccccccccchhhhccccC-CCC
Confidence 899999999999999 9999999999999999966 664
No 4
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=56.93 E-value=40 Score=40.64 Aligned_cols=62 Identities=24% Similarity=0.293 Sum_probs=35.4
Q ss_pred hHHHHHhhhhcccccCc--ccchhHHHHHHHHHHHHHHHHHHHHHHhhhheeeccchhHHHHHHHhhhhhhhhc
Q 047165 352 DVLQTLFNSAEGLANCT--EENMRFWIWRFISDQALAMAATNILIAITLSTCIVAHNNALLALLVSNNFAEIKS 423 (605)
Q Consensus 352 DiLd~Lf~s~~~l~~~~--~~~~r~~~~~fi~~~~l~v~~sll~Q~iTLNVAiNS~~naLLtLLiSNnFvEIKs 423 (605)
+-..+|||+.-++..-. .-+.....-.++....+. .|.++++=|=+| ||+-||+|.|-||=-
T Consensus 553 eS~~tLFWsiFglv~~~~~~l~~~Hkf~e~ig~~lfG-----~Y~vi~vIVLLN-----mLIAMmnnSyQeIeD 616 (822)
T KOG3609|consen 553 ESSKTLFWSIFGLVVLGSVVLPYKHKFTEFIGEVLFG-----VYNVILIIVLLN-----LLIAMMSNSYQEIED 616 (822)
T ss_pred HHHHHHHHHHHhcccccceecccchhHHHHHHHHHHH-----hhheeeHHHHHH-----HHHHHHHhHHHHHhh
Confidence 45678899864443211 101111122333322222 467777777777 899999999999964
No 5
>PF12564 TypeIII_RM_meth: Type III restriction/modification enzyme methylation subunit; InterPro: IPR022221 This domain family is found in bacteria, and is approximately 60 amino acids in length. It is found in association with PF01555 from PFAM. There are two completely conserved residues (F and S) that may be functionally important. It is found in bacterial phage resistance proteins, in particular in the methylation subunit of the type III restriction/modification enzyme complex [].
Probab=26.96 E-value=27 Score=29.12 Aligned_cols=31 Identities=29% Similarity=0.418 Sum_probs=27.8
Q ss_pred chhHHHHHHHhhhhhhhhcccccccCCCchhhh
Q 047165 405 HNNALLALLVSNNFAEIKSNVFKRFSKDNIHSL 437 (605)
Q Consensus 405 ~~naLLtLLiSNnFvEIKsSVFKKfdKenLFQi 437 (605)
|+..|+.+|++|+. ||..-|++-+-.-+|++
T Consensus 1 yD~~Li~~LL~~~~--ik~~Ff~~i~g~~iF~~ 31 (57)
T PF12564_consen 1 YDEELIKALLSNEL--IKEHFFKKIDGVLIFKK 31 (57)
T ss_pred CCHHHHHHHHcCHH--HHHHHHHHhCCeEEeeH
Confidence 56789999999997 99999999999988884
No 6
>KOG2422 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.61 E-value=53 Score=38.52 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=8.2
Q ss_pred cccHHHHHHHHHH
Q 047165 244 RLPWRCELLIDVG 256 (605)
Q Consensus 244 ~IP~~lEklm~fG 256 (605)
.=|+.++-++-..
T Consensus 279 ssPYHvdsLLqva 291 (665)
T KOG2422|consen 279 SSPYHVDSLLQVA 291 (665)
T ss_pred cCCcchhHHHHHH
Confidence 4477777766544
No 7
>KOG3571 consensus Dishevelled 3 and related proteins [General function prediction only]
Probab=23.17 E-value=46 Score=38.43 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=10.8
Q ss_pred hchhHHHHHhhhhcccc
Q 047165 349 FGGDVLQTLFNSAEGLA 365 (605)
Q Consensus 349 fGqDiLd~Lf~s~~~l~ 365 (605)
+|.|+.|=|+--.+++.
T Consensus 424 iGsDlVdWL~~hVeg~~ 440 (626)
T KOG3571|consen 424 IGSDLVDWLVDHVEGLH 440 (626)
T ss_pred cchhHHHHHHHHhhhhh
Confidence 46777777776655543
No 8
>PF06947 DUF1290: Protein of unknown function (DUF1290); InterPro: IPR009709 This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown.
Probab=20.56 E-value=1.1e+02 Score=27.87 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=22.0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHh
Q 047165 244 RLPWRCELLIDVGFFVCFDSFLSLL 268 (605)
Q Consensus 244 ~IP~~lEklm~fG~l~ClDsFLy~f 268 (605)
.||.++.+++-..++.|+||.+.-.
T Consensus 1 ~iP~~y~~YlsVAvlAaLDsvfGgi 25 (88)
T PF06947_consen 1 TIPDAYSPYLSVAVLAALDSVFGGI 25 (88)
T ss_pred CCcHHHHhHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999987643
No 9
>PHA03249 DNA packaging tegument protein UL25; Provisional
Probab=19.98 E-value=1.8e+02 Score=34.49 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=25.4
Q ss_pred hhheecccccchhhhHHHHHHHHHHHHHhhchhH
Q 047165 320 IYHMIRGQGTIKLYVVYNVLEIFDKLCQSFGGDV 353 (605)
Q Consensus 320 iYH~IRgQs~IKLYVifNmLEV~DKL~sSfGqDi 353 (605)
-+|.+.|+.-+--=..-..|...|.+|.++|-+.
T Consensus 317 ~lHll~~~~dLtdgqy~~~Lr~L~~~Lrs~~~~~ 350 (653)
T PHA03249 317 ALHFLMSQKAVTDGQYQACLRRLDEELRKRGTTE 350 (653)
T ss_pred hHhhhcccCCCcHHHHHHHHHHHHHHHHhcCCCC
Confidence 6788877776666666677888888888888653
No 10
>PF14293 YWFCY: YWFCY protein
Probab=16.97 E-value=71 Score=27.19 Aligned_cols=12 Identities=42% Similarity=1.107 Sum_probs=9.4
Q ss_pred hHHhHhhhhhhc
Q 047165 9 FQIYHFCYRAMG 20 (605)
Q Consensus 9 ~~~~~~~~~~m~ 20 (605)
..+|+|||.|..
T Consensus 26 ih~Y~~CY~af~ 37 (61)
T PF14293_consen 26 IHFYWFCYEAFQ 37 (61)
T ss_pred HHHHHHHHHHHH
Confidence 468999998764
Done!