BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047168
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|15233440|ref|NP_195326.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
gi|75318587|sp|O65639.1|CSP1_ARATH RecName: Full=Cold shock protein 1; Short=AtCSP1; AltName:
Full=Cold shock domain-containing protein 1
gi|3036806|emb|CAA18496.1| glycine-rich protein [Arabidopsis thaliana]
gi|7270554|emb|CAB81511.1| glycine-rich protein [Arabidopsis thaliana]
gi|110741941|dbj|BAE98911.1| glycine-rich protein [Arabidopsis thaliana]
gi|332661203|gb|AEE86603.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
Length = 299
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 151/295 (51%), Gaps = 48/295 (16%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
RSTGKV WF+ +KGYGFI PDDG +LFVHQ SI S+GYR+L +VEF + +DGK
Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKG-NNDSRRNNGGGY 124
+A++VTAPGG + K NN+ N G G K G
Sbjct: 70 KAVNVTAPGGGSL--KKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERR 127
Query: 125 GPGGVVCYNCDGVGHVARECTS----NRRNSNYNNNSG---------------------- 158
GG CYNC GH AR+CTS ++R + N G
Sbjct: 128 SRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNG 187
Query: 159 -----------GCYNCGDPEHFARDCPRQQGGSNSYN--NNSGGCFKCGGYGHLARDCIT 205
GCY CGD HFARDC ++ N + SG C+ CGG GH+ARDC T
Sbjct: 188 DQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCAT 247
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---SCFNCGKPGHFARECTKVA 257
+ G CY CG SGHLARDC G+GGGG +C+ CGK GHFAREC+ VA
Sbjct: 248 KRQPSRG---CYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSSVA 299
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 8/51 (15%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS--------CFNCGKPGHFARECTKVAN 258
CYNCG+ GH+++DCG GG GGGG C+NCG GHFAR+CT N
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGN 152
>gi|297798314|ref|XP_002867041.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
gi|297312877|gb|EFH43300.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 149/260 (57%), Gaps = 22/260 (8%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
RSTGKV WF+ +KGYGFI PDD +LFVHQ SI S+GYR+L E SVEF + +DGK
Sbjct: 9 VRSTGKVNWFNDSKGYGFITPDDRSEELFVHQSSIVSEGYRSLAEGDSVEFAITQGSDGK 68
Query: 65 YQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGY 124
+A++VTA GG + +NN+ N + G G G + + GG
Sbjct: 69 TKAVEVTALGGGAL-KKENNSRGNGARRGGGSGCYNCGELG--------HIGGGSGGGER 119
Query: 125 GPGGVVCYNCDGVGHVARECTSNRR-NSNYNNNSG----GCYNCGDPEHFARDCPRQQ-- 177
G CYNC GH AR+CT N + +G GCYNCGD HFARDC Q+
Sbjct: 120 GSRREGCYNCGDAGHFARDCTQKSVGNGDQRGAAGAGKDGCYNCGDIGHFARDCGNQKVT 179
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC---GAGGA 234
GS SG C+ CGG GH+AR+C T+ G CY CG SGHLARDC +GG
Sbjct: 180 AGSVRSGGGSGSCYTCGGVGHIARECATKRQPSRG---CYQCGGSGHLARDCDQRASGGN 236
Query: 235 GGGGSCFNCGKPGHFARECT 254
GGG C++CGK GHFAREC+
Sbjct: 237 GGGNKCYSCGKEGHFARECS 256
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS-CFNCGKPGHFARECTK 255
CYNCG+ GH+ G G G C+NCG GHFAR+CT+
Sbjct: 101 CYNCGELGHIGGGSGGGERGSRREGCYNCGDAGHFARDCTQ 141
>gi|224134074|ref|XP_002327749.1| predicted protein [Populus trichocarpa]
gi|222836834|gb|EEE75227.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 141/273 (51%), Gaps = 65/273 (23%)
Query: 2 AQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDG-YRTLYENQSVEFDVQLE 60
+ RSTG+V F KG+GFI+PD G DLFVH +IKSDG YRTLYE+ VEF + L
Sbjct: 9 TKEERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLN 68
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
D KYQA+DVTAPGG P+ T + G+N GGG
Sbjct: 69 -DDKYQAVDVTAPGGGPI----KRRTTFSGGFNRRNSNTNGGG----------------- 106
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRR----------NSNYNNNSGGCYNCGDPEHFA 170
C+NC GH+AREC +N + GCY CG+ HFA
Sbjct: 107 ----------CFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFA 156
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
R+C + NN+ GC+ CGG+GH+ARDC GG G CYNCG GHLARDC
Sbjct: 157 RECTK--------GNNNNGCYSCGGFGHVARDCP------GGSGACYNCGGHGHLARDCT 202
Query: 231 AGGAGGG--------GSCFNCGKPGHFARECTK 255
+ GG G CFNCGK GHFAR+C +
Sbjct: 203 SARGSGGGRFGSGNTGGCFNCGKDGHFARDCPE 235
>gi|255586301|ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223526275|gb|EEF28589.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 266
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/268 (51%), Positives = 159/268 (59%), Gaps = 36/268 (13%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDG-YRTLYENQSVEFDVQLEADG 63
RS GKV F KG+GFI+PDDGG DLFVH +IKSDG YR+L E+ VEF V L D
Sbjct: 12 VRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDN 71
Query: 64 KYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGG 123
KYQA+DVTAPGG P+ ++ +N NN RGG G G A GG + G+ S
Sbjct: 72 KYQAVDVTAPGGGPIQANHSN--------NNKRGGGGDGPAKRGGGFGGSWSSSSTRRNN 123
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQGGSN 181
G GG CYNC G GH+AREC + N+N N+N GGC+ CG+ HFARDC +N
Sbjct: 124 NGGGGGGCYNCGGSGHIARECNN---NNNSNSNGGGCFKCGNTGHFARDCTTRGNNNNNN 180
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC------------ 229
+ GCF CGGYGHLARDC GGGG CYNCG GHLARDC
Sbjct: 181 GGGDRDRGCFNCGGYGHLARDC------AGGGGACYNCGGFGHLARDCTSARGASGGGAG 234
Query: 230 ----GAGGAGGGGSCFNCGKPGHFAREC 253
G G GGG CFNCG+ GHFAREC
Sbjct: 235 GGRFGGKGGSGGGGCFNCGEEGHFAREC 262
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 18/73 (24%)
Query: 120 NGGGYGP-------GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-----------CY 161
N GGYG GG CYNC G GH+AR+CTS R S G C+
Sbjct: 191 NCGGYGHLARDCAGGGGACYNCGGFGHLARDCTSARGASGGGAGGGRFGGKGGSGGGGCF 250
Query: 162 NCGDPEHFARDCP 174
NCG+ HFAR+CP
Sbjct: 251 NCGEEGHFARECP 263
>gi|356559280|ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
Length = 250
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 153/275 (55%), Gaps = 44/275 (16%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R TG V WF+ KG+GFI+PDDGG DLFVHQ SI+SDGYRTL E VEF +
Sbjct: 1 MAE-ERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
+ K +A+DVT GAP+ + NNR G G+GFG +RRN
Sbjct: 60 DNDKTKAVDVTGVDGAPLQP--------RASAANNRAG----GSGFG--------ARRNG 99
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC-TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG 179
G G CY C GH+AR+C S+ + GGC+NCG H ARDC R GG
Sbjct: 100 GSG-----AACYQCGDFGHLARDCNRSSNTGGGGGGSGGGCFNCGGFGHLARDCVRGGGG 154
Query: 180 SNSYNNNSGG--CFKCGGYGHLARDCIT---RGSGGGGGGRCYNCGKSGHLARDCGAGG- 233
+ G CF+CGG+GH+ARDC T GG GG C+ CG+ GHLARDCG G
Sbjct: 155 NVGVGGGGGSGSCFRCGGFGHMARDCATGKGNIGGGSSGGGCFRCGEVGHLARDCGMEGG 214
Query: 234 -----------AGGGGSCFNCGKPGHFARECTKVA 257
GG +CFNCGKPGHFAREC + +
Sbjct: 215 RYGDGGNSGGGGGGKSTCFNCGKPGHFARECVEAS 249
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 131 CYNCDGVGHVAREC-------TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C VGH+AR+C + C+NCG P HFAR+C G
Sbjct: 196 CFRCGEVGHLARDCGMEGGRYGDGGNSGGGGGGKSTCFNCGKPGHFARECVEASG 250
>gi|294470718|gb|ADE80751.1| cold shock domain protein 1 [Eutrema salsugineum]
Length = 263
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 148/265 (55%), Gaps = 29/265 (10%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
RSTGKV WF+ +KGYGFI PDD G +LFVHQ +I S+G+R+L SVEF V DGK
Sbjct: 10 RSTGKVNWFNDSKGYGFITPDDDGEELFVHQSAILSEGFRSLTVGDSVEFAVTQGTDGKT 69
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+A++VTAPGGAP+H + ++ N G R GG G G+ ++
Sbjct: 70 KAVNVTAPGGAPLHRKEISSRGN--------GARRGGSCYHCGEV-GHMAKDCSSSDRGD 120
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQGGS 180
CY C GH AR+C + + G CYNCG+ HFARDC ++ G+
Sbjct: 121 RSSGGCYTCGDTGHFARDCVQKSSGNGGSGGERGGAGGECYNCGNTGHFARDCVQKSVGN 180
Query: 181 NSYNNNSGG--CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC--------- 229
+ GG C+ CGG GH+ARDC T+ G CY CG +GH+ARDC
Sbjct: 181 VGDRGSGGGGVCYNCGGAGHMARDCPTKRQPGA----CYECGGTGHMARDCDRRGSGGGR 236
Query: 230 GAGGAGGGGSCFNCGKPGHFARECT 254
G G GGGG+CF CG+ GHFAREC+
Sbjct: 237 GNAGGGGGGNCFKCGQGGHFARECS 261
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC----------GAGGAGGG 237
G C+ CG GH+A+DC + G G CY CG +GH ARDC G G G
Sbjct: 98 GSCYHCGEVGHMAKDCSSSDRGDRSSGGCYTCGDTGHFARDCVQKSSGNGGSGGERGGAG 157
Query: 238 GSCFNCGKPGHFARECTK 255
G C+NCG GHFAR+C +
Sbjct: 158 GECYNCGNTGHFARDCVQ 175
>gi|224074255|ref|XP_002304323.1| predicted protein [Populus trichocarpa]
gi|222841755|gb|EEE79302.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 138/267 (51%), Gaps = 62/267 (23%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSD-GYRTLYENQSVEFDVQLEADGK 64
RSTG+V F KG+GFI+PD G DLFVH +IKSD GYRTLYE+ VEF + L D K
Sbjct: 2 RSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLTED-K 60
Query: 65 YQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGY 124
YQA++VTAPGG P+ T + G++ G G
Sbjct: 61 YQAIEVTAPGGGPI----KRRTTTSGGFSRRNNNNNNNGVG------------------- 97
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG--------GCYNCGDPEHFARDCPRQ 176
C+NC GH+AR+C +N S N N+ GCY CG HFAR+C +
Sbjct: 98 ------CFNCGNPGHIARDCNNNSSKSYNNYNNNNNNRGADFGCYKCGSSGHFARECTK- 150
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG---- 232
N+ GC+ CGG GH+ARDC GG G CYNCG GHLARDC +
Sbjct: 151 --------GNNNGCYSCGGIGHVARDC------PGGSGACYNCGGYGHLARDCTSARVTG 196
Query: 233 ----GAGGGGSCFNCGKPGHFARECTK 255
G G G CFNCG GHFAR+C +
Sbjct: 197 GGRFGGGNSGGCFNCGNEGHFARDCPE 223
>gi|357518027|ref|XP_003629302.1| Major cold-shock protein [Medicago truncatula]
gi|355523324|gb|AET03778.1| Major cold-shock protein [Medicago truncatula]
Length = 329
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 147/300 (49%), Gaps = 69/300 (23%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R +G V WF+ KG+GFI+PDD DLFVHQ I+S+G+R+L E VEF +
Sbjct: 1 MAE-ERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
+GK +A+DVT P G P+ ++N+ G G R GG G
Sbjct: 60 DNGKTKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGG--------------- 104
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSN--------YNNNSGGCYNCGDPEHFARD 172
CY C GH+AR+C + RN + CY CG EHFARD
Sbjct: 105 ----------CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARD 154
Query: 173 CPRQQGGSNSYNNNSG----GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
C R G +N+ G C++CGG GH+ARDC T SGGGGGG CY CG+ GH+ARD
Sbjct: 155 CMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARD 214
Query: 229 CG-AGGAGGGG------------------------------SCFNCGKPGHFARECTKVA 257
C GG GG +CFNCGK GHFAR+C + +
Sbjct: 215 CSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEAS 274
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 53/124 (42%), Gaps = 41/124 (33%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP----RQQGGSNSYNNN 186
CY C GVGH+AR+C + S+ G CY CG+ H ARDC R GG+ Y++
Sbjct: 176 CYRCGGVGHIARDCATP---SSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDG 232
Query: 187 SGG---------------------CFKCGGYGHLARDCITRGSGG-------------GG 212
+G CF CG GH ARDC+ G GG
Sbjct: 233 NGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEASVGNLKAHTLSMCGVVHGG 292
Query: 213 GGRC 216
GGRC
Sbjct: 293 GGRC 296
>gi|18398546|ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|75165198|sp|Q94C69.1|CSP3_ARATH RecName: Full=Cold shock domain-containing protein 3; Short=AtCSP3
gi|14334920|gb|AAK59638.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|17104541|gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|148726892|dbj|BAF63841.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|330251603|gb|AEC06697.1| cold shock domain protein 3 [Arabidopsis thaliana]
Length = 301
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 159/296 (53%), Gaps = 48/296 (16%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
RS GKV+WF KGYGFI PDDGG +LFVHQ SI SDG+R+L +SVE+++ L +DGK
Sbjct: 10 RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAG-------------------- 105
+A++VTAPGG ++ K N++ SG N G G A
Sbjct: 70 KAIEVTAPGGGSLN--KKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSG 127
Query: 106 ----------FGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVAREC------TSNRR 149
G + + S N GG G GG CY+C VGH+A++C
Sbjct: 128 GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGG 187
Query: 150 NSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR-GS 208
+ GCY CG HFARDC +Q G + C+ CGG GH+A+ C ++ S
Sbjct: 188 GGGRGSGGDGCYMCGGVGHFARDC--RQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPS 245
Query: 209 GGGGGGR-CYNCGKSGHLARDC------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
GGGGGGR CY CG +GHLARDC +GG GG CF CGK GHFARECT VA
Sbjct: 246 GGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTSVA 301
>gi|297836502|ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
gi|297331973|gb|EFH62392.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
Length = 299
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 154/296 (52%), Gaps = 48/296 (16%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R GKV WF KGYGFI PDDGG +LFVHQ SI SDGYR+L +SVE+ + L +DGK
Sbjct: 8 RYIGKVNWFGDGKGYGFITPDDGGEELFVHQSSIVSDGYRSLTVGESVEYSITLGSDGKT 67
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGG---------------------- 103
+A++VTAPGG + + K N++ N G N G G
Sbjct: 68 KAVNVTAPGGGSL-NKKENSSRGNGGSCFNCGEVGHMAKDCDGGGGGRSYGGGGGRRSGG 126
Query: 104 ------AGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVAREC-----TSNRRNSN 152
G G++ + G G GG CY+C VGH+A++C +
Sbjct: 127 EGTCYVCGDVGHFARDCRQSGGGNSGGGGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGG 186
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-CFKCGGYGHLARDCITRGSGGG 211
+ S GCY CG HFARDC + GG+ G C+ CGG GH+AR C ++ GG
Sbjct: 187 RGSGSDGCYLCGGVGHFARDCRQNGGGNVGGGGGGGNTCYTCGGVGHIARVCTSKRPSGG 246
Query: 212 GGGRCYNCGKSGHLARDC----------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
CY CG++GHLARDC G GG GG G CFNCGK GHFAREC+ VA
Sbjct: 247 A---CYECGETGHLARDCDRRGSGSSGGGGGGGGGSGKCFNCGKEGHFARECSSVA 299
>gi|294470716|gb|ADE80750.1| cold shock domain protein 3 [Eutrema salsugineum]
Length = 295
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 147/302 (48%), Gaps = 52/302 (17%)
Query: 1 MAQ----LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFD 56
MAQ RSTGKV WF KGYGFI PDDGG +LFVHQ SI SDG+R+L +SVE+
Sbjct: 1 MAQEDQSAARSTGKVNWFSDGKGYGFITPDDGGDELFVHQSSIVSDGFRSLTVGESVEYA 60
Query: 57 VQLEADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDS 116
+ L +DGK +A++VTAPGG S KN ++ G +
Sbjct: 61 ITLGSDGKTKAVEVTAPGGG---SLKNKEISSRGNGGGCFNCGEIGHMAKDCVGGKSFGG 117
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVAREC-------------------------------- 144
GG G CYNC VGH AR+C
Sbjct: 118 GGRRSGGEGS----CYNCGNVGHFARDCRQNAGGNSVGGGGGGACYNCGEVGHMAKDCRG 173
Query: 145 ---TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG-GCFKCGGYGHLA 200
+ + GCY CGD HFARDC + GG G C+ CGG+GH+A
Sbjct: 174 GSGGNRYGGGGRGSGGEGCYMCGDVGHFARDCRQNVGGDVGGGGGGGNTCYTCGGFGHMA 233
Query: 201 RDCITR--GSGGGGGGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCGKPGHFARECTK 255
R C ++ GGGG G CY CG GHLARDC G+GG G CF CGK GHFAREC+
Sbjct: 234 RVCTSKRPSGGGGGVGACYECGGIGHLARDCDRRGSGGGSGSSKCFTCGKEGHFARECSS 293
Query: 256 VA 257
+A
Sbjct: 294 LA 295
>gi|225431120|ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
Length = 241
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/251 (46%), Positives = 136/251 (54%), Gaps = 38/251 (15%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MAQ RSTG V WF KG+GFI P++GG DLFVHQ SIKSDG+R+L E ++VEF + L
Sbjct: 1 MAQ-ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A+DVT P G+ V SK +N G G GGG W R +
Sbjct: 60 EDGRTKAVDVTGPDGSSVQGSKRDNYGGGGGGGGRGGRSGGGYG---SGW------RTGD 110
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRN-------SNYNNNSGGCYNCGDPEHFARDC 173
GG G GG CYNC G GH+AR+C RRN S GGCY CG P H ARDC
Sbjct: 111 RGGNGGGGAACYNCGGTGHLARDCV--RRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDC 168
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG---------------SGGGGGGRCYN 218
R + GGC+ CG YGHLARDC GGGGG CYN
Sbjct: 169 SR----PSGGGGGGGGCYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYN 224
Query: 219 CGKSGHLARDC 229
CG+ GH AR+C
Sbjct: 225 CGQEGHFAREC 235
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 51/77 (66%), Gaps = 10/77 (12%)
Query: 188 GGCFKCGGYGHLARDCITR--------GSGGGGGGRCYNCGKSGHLARDCG--AGGAGGG 237
C+ CGG GHLARDC+ R GGGGGG CY CG+ GHLARDC +GG GGG
Sbjct: 119 AACYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGG 178
Query: 238 GSCFNCGKPGHFARECT 254
G C+NCG GH AR+CT
Sbjct: 179 GGCYNCGDYGHLARDCT 195
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 10/50 (20%)
Query: 216 CYNCGKSGHLARDC----------GAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCG +GHLARDC G+GG GGGG C+ CG+PGH AR+C++
Sbjct: 121 CYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSR 170
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 12/56 (21%)
Query: 131 CYNCDGVGHVARECTSNR------------RNSNYNNNSGGCYNCGDPEHFARDCP 174
CYNC GH+AR+CT + GGCYNCG HFAR+CP
Sbjct: 181 CYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFARECP 236
>gi|307136096|gb|ADN33944.1| cold-shock DNA-binding family protein [Cucumis melo subsp. melo]
Length = 272
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 155/277 (55%), Gaps = 25/277 (9%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R TG V WF+ +KG+GFI+PD G DLFVHQ SIKSDGYR+L VEF +
Sbjct: 1 MAE-ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DGK +A++V A G SS N N G G G GG G GGY G
Sbjct: 60 DDGKSKAIEVVALDG----SSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRR 115
Query: 121 GGGYGPGGVVCYNCDGVGHVARECT-SNRRNSNYNNNSGGCYNCGDPEHFARDCPR-QQG 178
G G GG CY C GH+AR+CT + R+ GGC+ CG+ H ARDCPR G
Sbjct: 116 NGNSGGGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSG 175
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDC----ITRGSGGGGGGRCYNCGKSGHLARDC----- 229
G + G C+ CGG+GHLARDC GSGGGGGG C+NCG+ GH+ARDC
Sbjct: 176 GGGGGGSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESR 235
Query: 230 ---------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
G GG GG +CFNCGK GHFAREC +
Sbjct: 236 GSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 272
>gi|449456813|ref|XP_004146143.1| PREDICTED: cold shock protein 1-like [Cucumis sativus]
Length = 273
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 150/281 (53%), Gaps = 32/281 (11%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R TG V WF+ +KG+GFI+PD G DLFVHQ SIKSDGYR+L VEF +
Sbjct: 1 MAE-ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DGK +A++V A G SS N N G G GGGG G+G D R N
Sbjct: 60 DDGKSKAIEVVALDG----SSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGN 115
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQG 178
G GG CY C GH+AR+CT GGC+ CG+ H ARDCPR G
Sbjct: 116 SGA---GGGGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 172
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDC-----ITRGSGGGGGGRCYNCGKSGHLARDC---- 229
G G C+ CGG+GHLARDC GGGGGG C+NCG+ GH+ARDC
Sbjct: 173 GGGGGGGGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNES 232
Query: 230 -------------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
G GG GG +CFNCGK GHFAREC +
Sbjct: 233 RGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS 273
>gi|147791391|emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera]
Length = 247
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 136/255 (53%), Gaps = 40/255 (15%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MAQ RSTG V WF KG+GFI P++GG DLFVHQ SIKSDG+R+L E ++VEF + L
Sbjct: 1 MAQ-XRSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A+DVT P G+ V SK + G G GGG W R +
Sbjct: 60 EDGRTKAVDVTGPDGSSVQGSKRDXYGGGGGGGGRGGRSGGGYG---SGW------RTGD 110
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRN---------SNYNNNSGGCYNCGDPEHFAR 171
GG G GG CYNC G GH+AR+C RRN GGCY CG P H AR
Sbjct: 111 RGGNGGGGAACYNCGGTGHLARDCV--RRNNGGGGGGXGGGGGGGGGGCYTCGQPGHLAR 168
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-----------------SGGGGGG 214
DC R GG GGC+ CG YGHLARDC GGGGGG
Sbjct: 169 DCSRPSGGGGG--GGGGGCYNCGDYGHLARDCTLESGXAGRFGGGGGGGGGRFGGGGGGG 226
Query: 215 RCYNCGKSGHLARDC 229
CYNCG+ GH AR+C
Sbjct: 227 GCYNCGQEGHFAREC 241
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 51/81 (62%), Gaps = 14/81 (17%)
Query: 188 GGCFKCGGYGHLARDCITR----------GSGGGGGGRCYNCGKSGHLARDCG----AGG 233
C+ CGG GHLARDC+ R G GGGGGG CY CG+ GHLARDC GG
Sbjct: 119 AACYNCGGTGHLARDCVRRNNGGGGGGXGGGGGGGGGGCYTCGQPGHLARDCSRPSGGGG 178
Query: 234 AGGGGSCFNCGKPGHFARECT 254
GGGG C+NCG GH AR+CT
Sbjct: 179 GGGGGGCYNCGDYGHLARDCT 199
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 12/52 (23%)
Query: 216 CYNCGKSGHLARDC------------GAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCG +GHLARDC G GG GGGG C+ CG+PGH AR+C++
Sbjct: 121 CYNCGGTGHLARDCVRRNNGGGGGGXGGGGGGGGGGCYTCGQPGHLARDCSR 172
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 14/58 (24%)
Query: 131 CYNCDGVGHVARECTSNR--------------RNSNYNNNSGGCYNCGDPEHFARDCP 174
CYNC GH+AR+CT GGCYNCG HFAR+CP
Sbjct: 185 CYNCGDYGHLARDCTLESGXAGRFGGGGGGGGGRFGGGGGGGGCYNCGQEGHFARECP 242
>gi|356502875|ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
Length = 252
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 141/274 (51%), Gaps = 40/274 (14%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R TG V WF+ KG+GFI+PDDGG DLFVHQ SI+SDGYRTL E VEF +
Sbjct: 1 MAE-ERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
+ K +A+DVT GAP+ NN + G+GFG + N
Sbjct: 60 DNDKTKAVDVTGVDGAPLQPRAAAGNNNRAA-----------GSGFGFGARRNGGGGAA- 107
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC-TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG 179
CY C GH+AR+C S+ + GGC+NCG H ARDC R GG
Sbjct: 108 ----------CYQCGEFGHLARDCNRSSNSGGGGGGSGGGCFNCGGFGHLARDCVRGGGG 157
Query: 180 SNSYNNNSGGCFKCGG--YGHLARDCITRGSGGGGGGR---CYNCGKSGHLARDCGAGGA 234
S GG +GH+ARDC T GGGG C+ CG+ GHLARDCG G
Sbjct: 158 SVGIGGGGGGGSCFRCGGFGHMARDCATGKGNIGGGGSGGGCFRCGEVGHLARDCGMEGG 217
Query: 235 GGG-----------GSCFNCGKPGHFARECTKVA 257
G +CFNCGKPGHFAREC + +
Sbjct: 218 RFGGGGGSGGGGGKSTCFNCGKPGHFARECVEAS 251
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNN------SGGCYNCGDPEHFARDCPRQQG 178
C+ C VGH+AR+C C+NCG P HFAR+C G
Sbjct: 199 CFRCGEVGHLARDCGMEGGRFGGGGGSGGGGGKSTCFNCGKPGHFARECVEASG 252
>gi|413926631|gb|AFW66563.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
Length = 188
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA R G V WF+ KG+GFI P+DG DLFVHQ SIKS+G+R+L E + VEF V
Sbjct: 1 MAAAARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A+DVT P G+ V GG GGGG G
Sbjct: 61 DDGRTKAVDVTGPDGSFVRGGGGGGGGGGGYGGGGYGGGGGGGGG--------------- 105
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTS--NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C GH+AR+C+S GGCYNCG H ARDCP G
Sbjct: 106 ----------CFKCGEPGHMARDCSSGGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGG 155
Query: 179 GSNSYNNNSG------GCFKCGGYGHLARDCIT 205
G G C+ CG GH+ARDC T
Sbjct: 156 GGGGRFGGGGGGGGDRSCYNCGEAGHIARDCPT 188
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 17/81 (20%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG------ 238
CFKCG GH+ARDC + G G GGGG CYNCG++GH+ARDC +GG GGGG
Sbjct: 106 CFKCGEPGHMARDCSSGGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGG 165
Query: 239 ------SCFNCGKPGHFAREC 253
SC+NCG+ GH AR+C
Sbjct: 166 GGGGDRSCYNCGEAGHIARDC 186
>gi|223946111|gb|ACN27139.1| unknown [Zea mays]
Length = 187
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA R G V WF+ KG+GFI P+DG DLFVHQ SIKS+G+R+L E + VEF V
Sbjct: 1 MAAAARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A+DVT P G+ V G GG GGGG
Sbjct: 61 DDGRTKAVDVTGPDGSFVRGGGGGYGGGGYGGGGYGGGGGGGGG---------------- 104
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTS--NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C GH+AR+C+S GGCYNCG H ARDCP G
Sbjct: 105 ----------CFKCGEPGHMARDCSSGGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGG 154
Query: 179 GSNSYNNNSG------GCFKCGGYGHLARDCIT 205
G G C+ CG GH+ARDC T
Sbjct: 155 GGGGRFGGGGGGGGDRSCYNCGEAGHIARDCPT 187
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 17/81 (20%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG------ 238
CFKCG GH+ARDC + G G GGGG CYNCG++GH+ARDC +GG GGGG
Sbjct: 105 CFKCGEPGHMARDCSSGGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGG 164
Query: 239 ------SCFNCGKPGHFAREC 253
SC+NCG+ GH AR+C
Sbjct: 165 GGGGDRSCYNCGEAGHIARDC 185
>gi|146182859|ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1748
Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 100/228 (43%), Gaps = 57/228 (25%)
Query: 80 SSKNNNTNNNSGYNNNRGGRGGGGAGFGG--------YWKGNNDSRRNNGGGYGPGGVVC 131
+SK+ + N SG N + +G+G + + + R NGG G G C
Sbjct: 1395 ASKDQTSTNESGGNGWNSSQNNDNSGWGTSNTSSSSNFGQNSGRERNQNGGNKGKG---C 1451
Query: 132 YNCDGVGHVARECT----SNRRNS-----------------NYNNNSGGCYNCGDPEHFA 170
+ C VGH+A++CT R+ S N GC+ CG+ HF+
Sbjct: 1452 FKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHFS 1511
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC--------------------ITR---G 207
+DCP Q G CFKCG GH+++DC I++
Sbjct: 1512 KDCPNPQK-QQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKNTCFKCKQEGHISKDCPN 1570
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
S GG +C+NC + GH+++DC G CFNCG+ GH +RECTK
Sbjct: 1571 SQNSGGNKCFNCNQEGHMSKDCPNPSQKKKG-CFNCGEEGHQSRECTK 1617
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 78/213 (36%), Gaps = 51/213 (23%)
Query: 91 GYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCD----------GVGHV 140
G+ N+ G + G+ NN + N GGG+G + D G
Sbjct: 1303 GWGNSSNDSGQNASKEDGWGSSNNKTNSNEGGGWGQNMNKSSDNDWSKQDNSSSWGGAQN 1362
Query: 141 ARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY----------NNNSG-- 188
+ T+N S+ N G N + Q +N N+NSG
Sbjct: 1363 NKAPTNNLAKSSSNEGGGWGNNSSSSSSNNWGASKDQTSTNESGGNGWNSSQNNDNSGWG 1422
Query: 189 ---------------------------GCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCG 220
GCFKCG GH+A+DC + G G C+ C
Sbjct: 1423 TSNTSSSSNFGQNSGRERNQNGGNKGKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCN 1482
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ GH+++DC G CF CG+ GHF+++C
Sbjct: 1483 QEGHMSKDCPNQQQKKSG-CFKCGEEGHFSKDC 1514
Score = 45.1 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
GG C+NC+ GH++++C N + GC+NCG+ H +R+C +++
Sbjct: 1575 GGNKCFNCNQEGHMSKDC------PNPSQKKKGCFNCGEEGHQSRECTKER 1619
>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]
gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 100/228 (43%), Gaps = 57/228 (25%)
Query: 80 SSKNNNTNNNSGYNNNRGGRGGGGAGFGG--------YWKGNNDSRRNNGGGYGPGGVVC 131
+SK+ + N SG N + +G+G + + + R NGG G G C
Sbjct: 1395 ASKDQTSTNESGGNGWNSSQNNDNSGWGTSNTSSSSNFGQNSGRERNQNGGNKGKG---C 1451
Query: 132 YNCDGVGHVARECT----SNRRNS-----------------NYNNNSGGCYNCGDPEHFA 170
+ C VGH+A++CT R+ S N GC+ CG+ HF+
Sbjct: 1452 FKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHFS 1511
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC--------------------ITR---G 207
+DCP Q G CFKCG GH+++DC I++
Sbjct: 1512 KDCPNPQK-QQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKNTCFKCKQEGHISKDCPN 1570
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
S GG +C+NC + GH+++DC G CFNCG+ GH +RECTK
Sbjct: 1571 SQNSGGNKCFNCNQEGHMSKDCPNPSQKKKG-CFNCGEEGHQSRECTK 1617
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 78/213 (36%), Gaps = 51/213 (23%)
Query: 91 GYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCD----------GVGHV 140
G+ N+ G + G+ NN + N GGG+G + D G
Sbjct: 1303 GWGNSSNDSGQNASKEDGWGSSNNKTNSNEGGGWGQNMNKSSDNDWSKQDNSSSWGGAQN 1362
Query: 141 ARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY----------NNNSG-- 188
+ T+N S+ N G N + Q +N N+NSG
Sbjct: 1363 NKAPTNNLAKSSSNEGGGWGNNSSSSSSNNWGASKDQTSTNESGGNGWNSSQNNDNSGWG 1422
Query: 189 ---------------------------GCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCG 220
GCFKCG GH+A+DC + G G C+ C
Sbjct: 1423 TSNTSSSSNFGQNSGRERNQNGGNKGKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCN 1482
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ GH+++DC G CF CG+ GHF+++C
Sbjct: 1483 QEGHMSKDCPNQQQKKSG-CFKCGEEGHFSKDC 1514
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
GG C+NC+ GH++++C N + GC+NCG+ H +R+C +++
Sbjct: 1575 GGNKCFNCNQEGHMSKDC------PNPSQKKKGCFNCGEEGHQSRECTKER 1619
>gi|76577745|gb|ABA54143.1| putative glycine-rich protein [Picea glauca]
Length = 156
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 89/178 (50%), Gaps = 31/178 (17%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ +GKV WFD KGYGFI PDDG DLFVHQ SI S+G+R+L E ++VE+ V+ E G+
Sbjct: 5 KRSGKVKWFDSTKGYGFITPDDGSEDLFVHQTSIHSNGFRSLAEGEAVEYTVEHENGGRT 64
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+ALDVT P GA V + G G GGGG+
Sbjct: 65 KALDVTGPDGAFVQGNSGGGGGGRGGGRGGGGAGGGGGS--------------------- 103
Query: 126 PGGVVCYNCDGVGHVARECTS-----NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
CY C GH AR+CTS G CY CGD HFARDCP ++G
Sbjct: 104 -----CYKCGESGHFARDCTSGGGGGGNGGGGGGAGGGSCYQCGDFGHFARDCPNREG 156
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 10/48 (20%)
Query: 216 CYNCGKSGHLARDCGA----------GGAGGGGSCFNCGKPGHFAREC 253
CY CG+SGH ARDC + GG GGGSC+ CG GHFAR+C
Sbjct: 104 CYKCGESGHFARDCTSGGGGGGNGGGGGGAGGGSCYQCGDFGHFARDC 151
>gi|168015213|ref|XP_001760145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688525|gb|EDQ74901.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 187
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TGKV WF+ +KG+GFI PD GG DLFVHQ SI ++G+R+L E + VEF V+ DG+
Sbjct: 13 KETGKVKWFNSSKGFGFITPDKGGDDLFVHQTSIHAEGFRSLREGEVVEFQVESSEDGRT 72
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+AL VT PGGA V + G + G GG GA G + GGG
Sbjct: 73 KALAVTGPGGAFVQGASYRRDGYGGGGDGGGRGFGGSGARGRGRGGRGSGGFGGVGGGDR 132
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDC 173
P CYNC GH+AR+C + S SG C+ CG+ HFARDC
Sbjct: 133 P----CYNCGEGGHIARDCQNEPTGSVRQGGSGAGGSRNCHTCGEAGHFARDC 181
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
Query: 216 CYNCGKSGHLARDC----------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
CYNCG+ GH+ARDC G GAGG +C CG+ GHFAR+CT A
Sbjct: 134 CYNCGEGGHIARDCQNEPTGSVRQGGSGAGGSRNCHTCGEAGHFARDCTPAA 185
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 190 CFKCGGYGHLARDCITR--------GSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C+ CG GH+ARDC GSG GG C+ CG++GH ARDC A
Sbjct: 134 CYNCGEGGHIARDCQNEPTGSVRQGGSGAGGSRNCHTCGEAGHFARDCTPAAA 186
>gi|168031977|ref|XP_001768496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680209|gb|EDQ66647.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 178
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TGKV WF+ +KG+GFI PD GG DLFVHQ SI ++G+R+L E + VEF V+ DG+
Sbjct: 2 KETGKVKWFNSSKGFGFITPDKGGEDLFVHQTSIHAEGFRSLREGEVVEFQVESSEDGRT 61
Query: 66 QALDVTAPGGAPVHSSK----NNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNG 121
+AL VT PGGA V + G GG G
Sbjct: 62 KALAVTGPGGAFVQGASYRRDGYGGPGRGAGEGGGRGTVGGAGRGRGRGGRGVGGFVGER 121
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSN-----RRNSNYNNNSGGCYNCGDPEHFARDC 173
G G CYNC GH+AREC + R+ + CY CG+ H ARDC
Sbjct: 122 SGAAGGERTCYNCGEGGHIARECQNESTGNARQGGGGGGGNRSCYTCGEAGHLARDC 178
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 208 SGGGGGGR-CYNCGKSGHLARDCGAGGAGGGG----------SCFNCGKPGHFAREC 253
SG GG R CYNCG+ GH+AR+C G SC+ CG+ GH AR+C
Sbjct: 122 SGAAGGERTCYNCGEGGHIARECQNESTGNARQGGGGGGGNRSCYTCGEAGHLARDC 178
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--------CYNCGKSGHLARDC 229
C+ CG GH+AR+C +G G CY CG++GHLARDC
Sbjct: 131 CYNCGEGGHIARECQNESTGNARQGGGGGGGNRSCYTCGEAGHLARDC 178
>gi|324514516|gb|ADY45891.1| DNA-binding protein HEXBP [Ascaris suum]
Length = 146
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 7/133 (5%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN---- 186
CY C GH AR C N+ + G CYNCG P HFAR+CP Q+GG Y
Sbjct: 10 CYKCHEKGHFARNCP-NQESGARRGAGGDCYNCGQPGHFARECPSQRGGGGRYGGRGGGR 68
Query: 187 --SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
C++CGGYGH AR+C + GGGGG +CYNCGK GH++R+C G+ C+NC
Sbjct: 69 GGQSECYQCGGYGHFARECPSDRRGGGGGQKCYNCGKFGHISRECPESGSDQSKRCYNCH 128
Query: 245 KPGHFARECTKVA 257
+ GH +REC + A
Sbjct: 129 QIGHISRECPEEA 141
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGG--GGGGRCYNCGKSGHLARDCGA-------- 231
S N+ C+KC GH AR+C + SG G GG CYNCG+ GH AR+C +
Sbjct: 2 SNNSAEDECYKCHEKGHFARNCPNQESGARRGAGGDCYNCGQPGHFARECPSQRGGGGRY 61
Query: 232 ----GGAGGGGSCFNCGKPGHFARECT 254
GG GG C+ CG GHFAREC
Sbjct: 62 GGRGGGRGGQSECYQCGGYGHFARECP 88
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQGGSNSYNN 185
CY C G GH AREC S+RR GG CYNCG H +R+CP S ++
Sbjct: 74 CYQCGGYGHFARECPSDRR--------GGGGGQKCYNCGKFGHISRECP------ESGSD 119
Query: 186 NSGGCFKCGGYGHLARDCITRGSG 209
S C+ C GH++R+C G
Sbjct: 120 QSKRCYNCHQIGHISRECPEEAMG 143
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 105 GFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCG 164
G+G + + RR GGG GG CYNC GH++REC + ++ S CYNC
Sbjct: 79 GYGHFARECPSDRR--GGG---GGQKCYNCGKFGHISRECPESG-----SDQSKRCYNCH 128
Query: 165 DPEHFARDCPRQQGGSN 181
H +R+CP + G N
Sbjct: 129 QIGHISRECPEEAMGRN 145
>gi|449526459|ref|XP_004170231.1| PREDICTED: cold shock domain-containing protein 3-like, partial
[Cucumis sativus]
Length = 180
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R TG V WF+ +KG+GFI+PD G DLFVHQ SIKSDGYR+L VEF +
Sbjct: 1 MAE-ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DGK +A++V A G SS N N G G GGGG G+G D R N
Sbjct: 60 DDGKSKAIEVVALDG----SSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGN 115
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
G G G CY C GH+AR+CT GGC+ CG+ H ARDCPR
Sbjct: 116 SGAGGGG---CYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPR 167
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 190 CFKCGGYGHLARDCIT---RGSGGGGGGRCYNCGKSGHLARDCGAG 232
C++CG GHLARDC RG GGGGGG C+ CG+ GHLARDC G
Sbjct: 123 CYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRG 168
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 216 CYNCGKSGHLARDCG-----AGGAGGGGSCFNCGKPGHFARECTK 255
CY CG+ GHLARDC GG GGGG CF CG+ GH AR+C +
Sbjct: 123 CYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPR 167
>gi|168022724|ref|XP_001763889.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684894|gb|EDQ71293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TGKV WF+ +KG+GFI PD GG DLFVHQ SI ++G+R+L E + VEF V+ DG+
Sbjct: 13 KETGKVKWFNSSKGFGFITPDKGGDDLFVHQTSIHAEGFRSLREGEVVEFQVESSEDGRT 72
Query: 66 QALDVTAPGGAPVH----SSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNG 121
+AL VT PGGA V G G GGG A G +
Sbjct: 73 KALAVTGPGGAFVQGASYRRDGYGGGGRGGGEGGGRGFGGGAARGRGRGGRGSGGFGGER 132
Query: 122 GGYGPGGVVCYNCDGVGHVAREC----TSNRRN----SNYNNNSGGCYNCGDPEHFARDC 173
GG G G CYNC GH+AR+C T N R S CY CG+ HFARDC
Sbjct: 133 GGVGGGDRSCYNCGEGGHMARDCQNESTGNARQGGGGGGGVGGSRSCYTCGEAGHFARDC 192
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 13/55 (23%)
Query: 216 CYNCGKSGHLARDCGAGGAG-------------GGGSCFNCGKPGHFARECTKVA 257
CYNCG+ GH+ARDC G G SC+ CG+ GHFAR+CT A
Sbjct: 142 CYNCGEGGHMARDCQNESTGNARQGGGGGGGVGGSRSCYTCGEAGHFARDCTPAA 196
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Query: 190 CFKCGGYGHLARDCITRGSGGG-----------GGGRCYNCGKSGHLARDCGAGGAG 235
C+ CG GH+ARDC +G G CY CG++GH ARDC A
Sbjct: 142 CYNCGEGGHMARDCQNESTGNARQGGGGGGGVGGSRSCYTCGEAGHFARDCTPAAAA 198
>gi|449445142|ref|XP_004140332.1| PREDICTED: cold shock domain-containing protein 4-like [Cucumis
sativus]
Length = 181
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 92/185 (49%), Gaps = 21/185 (11%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+L RSTG V WF KG+GFI PDD DLFVHQ SI+S+G+RTL++ Q+VEF + +
Sbjct: 1 MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
D + +A+DVT + +T G RG G G GG
Sbjct: 61 QDQRAKAVDVTVI---------DRSTRYGGGRGGGRGRGGSYGRFGGGGRGFGRGRWNEG 111
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC------------TSNRRNSNYNNNSGGCYNCGDPEH 168
G G GG CYNC +GH+AR+C R GCYNCGD H
Sbjct: 112 PSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGH 171
Query: 169 FARDC 173
ARDC
Sbjct: 172 LARDC 176
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 17/55 (30%)
Query: 216 CYNCGKSGHLARDCGAGGAGG-----------------GGSCFNCGKPGHFAREC 253
CYNCG+ GHLARDC G G G C+NCG GH AR+C
Sbjct: 122 CYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC 176
>gi|356507945|ref|XP_003522723.1| PREDICTED: uncharacterized protein LOC100820359 [Glycine max]
Length = 194
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Query: 2 AQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEA 61
++ R TGKV WFD KG+GFI DD G + FVHQ SI+SDG+R+L +SVEF + +
Sbjct: 4 SEKQRVTGKVKWFDDQKGFGFITTDDSGEEFFVHQSSIRSDGFRSLALGESVEFLIDSDP 63
Query: 62 DGKYQALDVTAPGGAPVH----------SSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWK 111
+G+ +A+DVT P +PV S RGGRGG G G GGY
Sbjct: 64 EGRTKAVDVTGPDESPVQGTRGGGGGGRGSYGGGGGRGGYGGGGRGGRGGYGGGGGGYGG 123
Query: 112 GNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTS----NRRNSNYNNNSGGCYNCGDPE 167
G GGG G GG CY C GH+AR+C+ R G CYNCG+
Sbjct: 124 GGYGGGGGYGGGGGGGGGGCYKCGETGHIARDCSQGGGGGGRYGGGGGGGGSCYNCGESG 183
Query: 168 HFARDCP 174
HFARDCP
Sbjct: 184 HFARDCP 190
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 9/52 (17%)
Query: 215 RCYNCGKSGHLARDCG---------AGGAGGGGSCFNCGKPGHFARECTKVA 257
CY CG++GH+ARDC GG GGGGSC+NCG+ GHFAR+C A
Sbjct: 142 GCYKCGETGHIARDCSQGGGGGGRYGGGGGGGGSCYNCGESGHFARDCPSSA 193
>gi|302824155|ref|XP_002993723.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
gi|300138447|gb|EFJ05215.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
Length = 165
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ +GKV WF+ AKG+GFI PDDGG DLFVHQ SI +DG+R+L + ++VEF + DG+
Sbjct: 7 KKSGKVKWFNSAKGFGFITPDDGGEDLFVHQSSIHADGFRSLKDGEAVEFTIDRSEDGRT 66
Query: 66 QALDVTAPGGAPVH-SSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGY 124
+ALDVT P G+ V +S+ + SG GGGG GG G
Sbjct: 67 KALDVTGPEGSFVQGASRRDAGGFGSGGGGGGRFGGGGGRSGGGRGDG------------ 114
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCP 174
C+ C GH++R+C S GG CYNC H A+DCP
Sbjct: 115 ------CFKCGQSGHISRDCPSGGGGGGGRGGGGGGRNCYNCQQSGHIAKDCP 161
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS--------CFNCGKPGHFAREC 253
C+ CG+SGH++RDC +GG GGGG C+NC + GH A++C
Sbjct: 115 CFKCGQSGHISRDCPSGGGGGGGRGGGGGGRNCYNCQQSGHIAKDC 160
>gi|71747588|ref|XP_822849.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70832517|gb|EAN78021.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|261332660|emb|CBH15655.1| predicted zinc finger protein [Trypanosoma brucei gambiense DAL972]
Length = 140
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 77/130 (59%), Gaps = 8/130 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++REC + R N CYNCG P+H +RDCP + G N S
Sbjct: 12 TCYNCGQPGHMSRECPNARSGGNMGGGRS-CYNCGQPDHISRDCPNARTGGNMGGGRS-- 68
Query: 190 CFKCGGYGHLARDCITRGSGG--GGGGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCG 244
C+ CG GH++RDC SGG GGG CY+C + GH+AR+C A A GG +CFNCG
Sbjct: 69 CYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPADAAAGGRACFNCG 128
Query: 245 KPGHFARECT 254
+PGH +R C
Sbjct: 129 QPGHLSRACP 138
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 8/108 (7%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG--GG 212
+N+ CYNCG P H +R+CP + G N S C+ CG H++RDC +GG GG
Sbjct: 8 SNARTCYNCGQPGHMSRECPNARSGGNMGGGRS--CYNCGQPDHISRDCPNARTGGNMGG 65
Query: 213 GGRCYNCGKSGHLARDC----GAGGAGGGGSCFNCGKPGHFARECTKV 256
G CYNCG+ GH++RDC G GGG +C++C + GH AREC
Sbjct: 66 GRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNA 113
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGG--GGGGRCYNCGKSGHLARDCG----AGGA 234
N +N+ C+ CG GH++R+C SGG GGG CYNCG+ H++RDC G
Sbjct: 4 NMQMSNARTCYNCGQPGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTGGNM 63
Query: 235 GGGGSCFNCGKPGHFARECTKV 256
GGG SC+NCG+PGH +R+C
Sbjct: 64 GGGRSCYNCGRPGHISRDCPNA 85
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC GH++R+C + R N CY+C H AR+CP N+ +
Sbjct: 65 GGRSCYNCGRPGHISRDCPNARSGGNMGGGR-ACYHCQQEGHIARECP------NAPADA 117
Query: 187 SGG---CFKCGGYGHLARDCITR 206
+ G CF CG GHL+R C +
Sbjct: 118 AAGGRACFNCGQPGHLSRACPVK 140
>gi|340057210|emb|CCC51552.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 138
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++REC R N + CYNCG P H +RDCP +GGS S+ S C
Sbjct: 13 CYNCGQPGHISRECPGARSG---NADGRACYNCGQPGHISRDCPGMRGGS-SFGGRS--C 66
Query: 191 FKCGGYGHLARDCIT-RGSGGGGGGR-CYNCGKSGHLARDC----GAGGAGGGGSCFNCG 244
+ CG GH++RDC T RG+ GG R CY+C + GH+ARDC G GGG+C+NCG
Sbjct: 67 YNCGKVGHISRDCPTARGAYGGPQTRSCYHCQQEGHIARDCPNAPADGAVRGGGACYNCG 126
Query: 245 KPGHFARECT 254
+PGH +R C
Sbjct: 127 QPGHISRACP 136
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
GG GG CYNC VGH++R+C + R + + CY+C H ARDCP ++
Sbjct: 57 GGSSFGGRSCYNCGKVGHISRDCPTA-RGAYGGPQTRSCYHCQQEGHIARDCP--NAPAD 113
Query: 182 SYNNNSGGCFKCGGYGHLARDCITR 206
G C+ CG GH++R C +
Sbjct: 114 GAVRGGGACYNCGQPGHISRACPVK 138
>gi|302822137|ref|XP_002992728.1| hypothetical protein SELMODRAFT_186937 [Selaginella moellendorffii]
gi|300139469|gb|EFJ06209.1| hypothetical protein SELMODRAFT_186937 [Selaginella moellendorffii]
Length = 159
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 89/172 (51%), Gaps = 26/172 (15%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ +GKV WF+ AKG+GFI PDDGG DLFVHQ SI +DG+R+L + ++VEF + DG+
Sbjct: 7 KKSGKVKWFNSAKGFGFITPDDGGEDLFVHQSSIHADGFRSLKDGEAVEFTIDRSEDGRT 66
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+ALDVT P G+ V + ++ G GGR GGG G
Sbjct: 67 KALDVTGPEGSFVQGAGADSGRGGGGRFGGGGGRSGGGRG-------------------- 106
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCP 174
C+ C GH++R+C S GG CYNC H A+DCP
Sbjct: 107 ---DGCFKCGQSGHISRDCPSGGGGGGGRGGGGGGRNCYNCQQSGHIAKDCP 155
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS--------CFNCGKPGHFAREC 253
C+ CG+SGH++RDC +GG GGGG C+NC + GH A++C
Sbjct: 109 CFKCGQSGHISRDCPSGGGGGGGRGGGGGGRNCYNCQQSGHIAKDC 154
>gi|281200716|gb|EFA74934.1| hypothetical protein PPL_11968 [Polysphondylium pallidum PN500]
Length = 254
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 18/134 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSNSYNNNS 187
CYNC GH++REC + S N+ SGG C+NCG H +RDC QGGS S
Sbjct: 91 CYNCGNTGHISRECPNK---SERNDRSGGDRACFNCGKTGHMSRDC--TQGGS------S 139
Query: 188 GGCFKCGGYGHLARDCITRG---SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
GCFKCG GH++RDC G G GG +C+ C ++GH++RDC G SCFNCG
Sbjct: 140 AGCFKCGKTGHISRDCTESGGSDRGHGGDKKCFKCNQTGHISRDC-PNSDSQGPSCFNCG 198
Query: 245 KPGHFARECTKVAN 258
+ GH +RECTK N
Sbjct: 199 ESGHKSRECTKSKN 212
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 12/128 (9%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++RECT + NN C+NCG P H +R+CP G+ N+G C
Sbjct: 39 CFKCGKPGHMSRECTQGGGSDRGGNN---CFNCGKPGHISRECPDGAAGA----GNTGSC 91
Query: 191 FKCGGYGHLARDCI---TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
+ CG GH++R+C R GG C+NCGK+GH++RDC GG+ G CF CGK G
Sbjct: 92 YNCGNTGHISRECPNKSERNDRSGGDRACFNCGKTGHMSRDCTQGGSSAG--CFKCGKTG 149
Query: 248 HFARECTK 255
H +R+CT+
Sbjct: 150 HISRDCTE 157
>gi|10185395|emb|CAC08539.1| CCHC zinc finger protein [Trypanosoma brucei]
Length = 140
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++REC + R N CYNCG P+H +RDCP + G N S
Sbjct: 12 TCYNCGHAGHMSRECPNARSGGNMGGGRS-CYNCGQPDHISRDCPNARTGGNMGGGRS-- 68
Query: 190 CFKCGGYGHLARDCITRGSGG--GGGGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCG 244
C+ CG GH++RDC SGG GGG CY+C + GH+AR+C A GG +CFNCG
Sbjct: 69 CYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPLDAAAGGRACFNCG 128
Query: 245 KPGHFARECT 254
+PGH +R C
Sbjct: 129 QPGHLSRACP 138
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG--GG 212
+N+ CYNCG H +R+CP + G N S C+ CG H++RDC +GG GG
Sbjct: 8 SNARTCYNCGHAGHMSRECPNARSGGNMGGGRS--CYNCGQPDHISRDCPNARTGGNMGG 65
Query: 213 GGRCYNCGKSGHLARDC----GAGGAGGGGSCFNCGKPGHFARECTKV 256
G CYNCG+ GH++RDC G GGG +C++C + GH AREC
Sbjct: 66 GRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNA 113
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGG--GGGGRCYNCGKSGHLARDCG----AGGA 234
N +N+ C+ CG GH++R+C SGG GGG CYNCG+ H++RDC G
Sbjct: 4 NMQMSNARTCYNCGHAGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTGGNM 63
Query: 235 GGGGSCFNCGKPGHFARECTKV 256
GGG SC+NCG+PGH +R+C
Sbjct: 64 GGGRSCYNCGRPGHISRDCPNA 85
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC GH++R+C + R N CY+C H AR+CP + +
Sbjct: 65 GGRSCYNCGRPGHISRDCPNARSGGNMGGGR-ACYHCQQEGHIARECP-----NAPLDAA 118
Query: 187 SGG--CFKCGGYGHLARDCITR 206
+GG CF CG GHL+R C +
Sbjct: 119 AGGRACFNCGQPGHLSRACPVK 140
>gi|15226451|ref|NP_179702.1| glycine-rich protein 2B [Arabidopsis thaliana]
gi|17366505|sp|Q38896.1|CSP4_ARATH RecName: Full=Cold shock domain-containing protein 4; Short=AtCSP4;
AltName: Full=Glycine-rich protein 2b; Short=AtGRP2b
gi|1063684|gb|AAA91165.1| AtGRP2b [Arabidopsis thaliana]
gi|4803937|gb|AAD29810.1| glycine-rich protein (AtGRP2) [Arabidopsis thaliana]
gi|16323178|gb|AAL15323.1| At2g21060/F26H11.18 [Arabidopsis thaliana]
gi|60543359|gb|AAX22277.1| At2g21060 [Arabidopsis thaliana]
gi|330252023|gb|AEC07117.1| glycine-rich protein 2B [Arabidopsis thaliana]
Length = 201
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 95/183 (51%), Gaps = 16/183 (8%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI P DGG DLFVHQ SI+S+G+R+L +SVEFDV+++ G+
Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRP 73
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+A++V+ P GAPV + ++ GG GGG G G Y G GG G
Sbjct: 74 KAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGG 133
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG---------------GCYNCGDPEHFA 170
C+ C GH+AREC+ + G CY+CG+ HFA
Sbjct: 134 GDN-SCFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGGGGGGGGGGLSCYSCGESGHFA 192
Query: 171 RDC 173
RDC
Sbjct: 193 RDC 195
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 20/59 (33%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGG--------------------SCFNCGKPGHFARECT 254
C+ CG+ GH+AR+C GG G G SC++CG+ GHFAR+CT
Sbjct: 138 CFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGGGGGGGGGGLSCYSCGESGHFARDCT 196
>gi|294874952|ref|XP_002767169.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239868618|gb|EEQ99886.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C+ GH AR+C + CYNCG P+H ARDCP +Q N
Sbjct: 17 TCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNEQ-------TNQRP 69
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC-----------GAGGAGGGG 238
CFKCG GH ARDC + C+ CG++GHLARDC G G
Sbjct: 70 CFKCGKVGHFARDCTEPDTRA-----CFRCGETGHLARDCPNEDTRPESERAPRGRSEGR 124
Query: 239 SCFNCGKPGHFAREC 253
+CF CGKPGH AR+C
Sbjct: 125 NCFKCGKPGHLARDC 139
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR---CYNCGKSGHLARDCGAGGAGGGGSCFN 242
+S CF C GH ARDC S G R CYNCGK HLARDC CF
Sbjct: 14 SSSTCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDC-PNEQTNQRPCFK 72
Query: 243 CGKPGHFARECTK 255
CGK GHFAR+CT+
Sbjct: 73 CGKVGHFARDCTE 85
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCP 174
P C+ C GH+AR+C + G C+ CG P H ARDCP
Sbjct: 86 PDTRACFRCGETGHLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLARDCP 140
>gi|294948106|ref|XP_002785619.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239899598|gb|EER17415.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 67/135 (49%), Gaps = 23/135 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C+ GH AR+C + CYNCG P+H ARDCP +Q N
Sbjct: 17 TCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNEQ-------TNQRP 69
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC-----------GAGGAGGGG 238
CFKCG GH ARDC + C+ CG++GHLARDC G G
Sbjct: 70 CFKCGKVGHFARDCTEPDTRA-----CFRCGQTGHLARDCPNEDTRPESERAPRGRSEGR 124
Query: 239 SCFNCGKPGHFAREC 253
+CF CGKPGH AR+C
Sbjct: 125 NCFKCGKPGHLARDC 139
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR---CYNCGKSGHLARDCGAGGAGGGGSCFN 242
+S CF C GH ARDC S G R CYNCGK HLARDC CF
Sbjct: 14 SSSTCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDC-PNEQTNQRPCFK 72
Query: 243 CGKPGHFARECTK 255
CGK GHFAR+CT+
Sbjct: 73 CGKVGHFARDCTE 85
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCP 174
P C+ C GH+AR+C + G C+ CG P H ARDCP
Sbjct: 86 PDTRACFRCGQTGHLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLARDCP 140
>gi|255545420|ref|XP_002513770.1| cold shock protein, putative [Ricinus communis]
gi|223546856|gb|EEF48353.1| cold shock protein, putative [Ricinus communis]
Length = 184
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ RS G V WF KG+GFI PDDGG DLFVHQ SI+SDG+RTL E Q VEF V
Sbjct: 1 MAENKRSIGTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSEGQPVEFSVDFG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A+DV G G GGG G R
Sbjct: 61 EDGRTKAVDVIPRSRRGGRGGFGRGFYGGRGRGGGGGYSGGGRGDGG---VYVRRGRGGR 117
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC--------TSNRRNSNYNNNSGGCYNCGDPEHFARD 172
GG G GG CYNC GH+AR+C R SG CYNCG+ HFARD
Sbjct: 118 SGGGGAGGSACYNCGRYGHLARDCYQGGGGGGGGGSRRFGGGGGSGACYNCGEEGHFARD 177
Query: 173 C 173
C
Sbjct: 178 C 178
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 13/54 (24%)
Query: 216 CYNCGKSGHLARDC-------------GAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNCG+ GHLARDC GG GG G+C+NCG+ GHFAR+C +
Sbjct: 128 CYNCGRYGHLARDCYQGGGGGGGGGSRRFGGGGGSGACYNCGEEGHFARDCANI 181
>gi|224063128|ref|XP_002301004.1| predicted protein [Populus trichocarpa]
gi|222842730|gb|EEE80277.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ RSTG V WF KG+GFI PDDGG DLFVHQ SI+SDG+RTL + Q VEF V
Sbjct: 1 MAETKRSTGTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVGSG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A DV + GY + RG GG SR
Sbjct: 61 EDGRAKAADVVGASRSRRPPRGGRGGGGGRGYYSGRGRGGGYER--------GGHSRGRG 112
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC-------------TSNRRNSNYNNNSGGCYNCGDPE 167
GG G G C+NC GH+AR+C R + GGCYNCG+
Sbjct: 113 YGGGGSSGGACFNCGRYGHLARDCYEGGDDGGRYGGGGGRRYSGGGGGGGGGCYNCGEEG 172
Query: 168 HFARDCP 174
HFARDCP
Sbjct: 173 HFARDCP 179
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 18/61 (29%)
Query: 216 CYNCGKSGHLARDC------------------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
C+NCG+ GHLARDC GG GGGG C+NCG+ GHFAR+C
Sbjct: 123 CFNCGRYGHLARDCYEGGDDGGRYGGGGGRRYSGGGGGGGGGCYNCGEEGHFARDCPNAG 182
Query: 258 N 258
N
Sbjct: 183 N 183
>gi|358346811|ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355503393|gb|AES84596.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 2159
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH+ARECT G CY CG+ H AR+C ++ GG G C
Sbjct: 1431 CYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGGGTC 1490
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR---CYNCGKSGHLARDC----GAGGAGGGGSCFNC 243
+KCG GH+ARDC G GGGG G CY CG+SGH+AR+C G GG GGGG+C+ C
Sbjct: 1491 YKCGESGHMARDCTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGTCYKC 1550
Query: 244 GKPGHFARECTK 255
G+ GH ARECT+
Sbjct: 1551 GESGHMARECTQ 1562
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 8/132 (6%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-CYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C GH+ARECT GG CY CG+ H ARDC Q+GG G
Sbjct: 1460 CYKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARDCT-QEGGGGGGRGGGGS 1518
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG--RCYNCGKSGHLARDC----GAGGAGGGGSCFNC 243
C+KCG GH+AR+C G GGG GG CY CG+SGH+AR+C G GG GGG+C+ C
Sbjct: 1519 CYKCGESGHMARECTQEGGGGGRGGGGTCYKCGESGHMARECTQEGGGGGGRGGGACYKC 1578
Query: 244 GKPGHFARECTK 255
G+ GH ARECT+
Sbjct: 1579 GESGHMARECTQ 1590
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 111 KGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFA 170
K NDS G G G GG C+ C GH+ARECT G CY CG+ H A
Sbjct: 1353 KDYNDSGGGRGRGRGRGGGACHKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMA 1412
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR---CYNCGKSGHLAR 227
R+C Q+GG G C+KCG GH+AR+C G GGGG G CY CG+SGH+AR
Sbjct: 1413 RECT-QEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMAR 1471
Query: 228 DC------GAGGAGGGGSCFNCGKPGHFARECTK 255
+C G G GGGG+C+ CG+ GH AR+CT+
Sbjct: 1472 ECTQEGGGGGRGGGGGGTCYKCGESGHMARDCTQ 1505
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 100/181 (55%), Gaps = 15/181 (8%)
Query: 88 NNSGYNNNRGGRGGGGA----GFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARE 143
N+SG RG GGGA G G+ ++ GGG GG CY C GH+ARE
Sbjct: 1356 NDSGGGRGRGRGRGGGACHKCGESGH-MARECTQEGGGGGGRGGGGSCYKCGESGHMARE 1414
Query: 144 CTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
CT G CY CG+ H AR+C Q+GG G C+KCG GH+AR+C
Sbjct: 1415 CTQEGGGGGGRGGGGSCYKCGESGHMARECT-QEGGGGGGRGGGGSCYKCGESGHMAREC 1473
Query: 204 ITR----GSGGGGGGRCYNCGKSGHLARDC-----GAGGAGGGGSCFNCGKPGHFARECT 254
G GGGGGG CY CG+SGH+ARDC G GG GGGGSC+ CG+ GH ARECT
Sbjct: 1474 TQEGGGGGRGGGGGGTCYKCGESGHMARDCTQEGGGGGGRGGGGSCYKCGESGHMARECT 1533
Query: 255 K 255
+
Sbjct: 1534 Q 1534
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 78/152 (51%), Gaps = 27/152 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG------GCYNCGDPEHFARDCPRQQGGSNSYN 184
CY C GH+ARECT G CY CG+ H AR+C ++ GG
Sbjct: 1930 CYKCGESGHMARECTQEGGGGRGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGRG 1989
Query: 185 NNSG--GCFKCGGYGHLARDCITRGSGGGGGGR-----------CYNCGKSGHLARDC-- 229
G C+KCG GH+AR+C G GGGG G CY CG+SGH+AR+C
Sbjct: 1990 GGRGGGACYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECTQ 2049
Query: 230 ------GAGGAGGGGSCFNCGKPGHFARECTK 255
G GG GGG+C+ CG+ GH ARECT+
Sbjct: 2050 EGGGGGGRGGGRGGGACYKCGESGHMARECTQ 2081
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 77/158 (48%), Gaps = 35/158 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG--------GCYNCGDPEHFARDCPRQQGGSNS 182
CY C GH+ARECT G CY CG+ H AR+C ++ GG
Sbjct: 1997 CYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECTQEGGGGGG 2056
Query: 183 YNNNSG--GCFKCGGYGHLARDCITRGSGGGGGGR-------------CYNCGKSGHLAR 227
G C+KCG GH+AR+C G GGGGGG CY CG+SGH+AR
Sbjct: 2057 RGGGRGGGACYKCGESGHMARECTQEGGGGGGGGWGGGGRGGGSGGGACYKCGESGHMAR 2116
Query: 228 DC------------GAGGAGGGGSCFNCGKPGHFAREC 253
DC G G G GG+C+ CG+ GHFAREC
Sbjct: 2117 DCTQEGGGGGGWGGGGRGGGSGGNCYKCGESGHFAREC 2154
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 77/156 (49%), Gaps = 31/156 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
CY C GH+ARECT CY CG+ H AR+C ++ GG +
Sbjct: 1965 CYKCGESGHMARECTQEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGWGGGG 2024
Query: 188 G-------GCFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDC----- 229
C+KCG GH+AR+C G GGGG G CY CG+SGH+AR+C
Sbjct: 2025 RGGGSGGGACYKCGESGHMARECTQEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGG 2084
Query: 230 ----------GAGGAGGGGSCFNCGKPGHFARECTK 255
G GG GGG+C+ CG+ GH AR+CT+
Sbjct: 2085 GGGGGGWGGGGRGGGSGGGACYKCGESGHMARDCTQ 2120
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C GH+AR+CT G CY CG+ H AR+C ++ GG +
Sbjct: 1489 TCYKCGESGHMARDCTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGT-- 1546
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDC 229
C+KCG GH+AR+C G GGGG G CY CG+SGH+AR+C
Sbjct: 1547 CYKCGESGHMARECTQEGGGGGGRGGGACYKCGESGHMAREC 1588
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
CY C GH+ARECT CY CG+ H AR+C ++ GG
Sbjct: 2034 CYKCGESGHMARECTQEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGGGWGG 2093
Query: 188 G---------GCFKCGGYGHLARDCITRGSGGGGGGR----------CYNCGKSGHLARD 228
G C+KCG GH+ARDC G GGGG G CY CG+SGH AR+
Sbjct: 2094 GGRGGGSGGGACYKCGESGHMARDCTQEGGGGGGWGGGGRGGGSGGNCYKCGESGHFARE 2153
Query: 229 CGAGGA 234
C A A
Sbjct: 2154 CPASTA 2159
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 19/103 (18%)
Query: 172 DCPRQQGGSNSYNNN-----------SGGCFKCGGYGHLARDCITRGSGGGGGGR---CY 217
D P+ + S YN++ G C KCG GH+AR+C G GGGG G CY
Sbjct: 1344 DVPQAKDQSKDYNDSGGGRGRGRGRGGGACHKCGESGHMARECTQEGGGGGGRGGGGSCY 1403
Query: 218 NCGKSGHLARDC-----GAGGAGGGGSCFNCGKPGHFARECTK 255
CG+SGH+AR+C G GG GGGGSC+ CG+ GH ARECT+
Sbjct: 1404 KCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQ 1446
>gi|115474635|ref|NP_001060914.1| Os08g0129200 [Oryza sativa Japonica Group]
gi|29467522|dbj|BAC66711.1| putative cold shock protein-1 [Oryza sativa Japonica Group]
gi|113622883|dbj|BAF22828.1| Os08g0129200 [Oryza sativa Japonica Group]
gi|187609563|gb|ACD13289.1| cold shock domain protein 2 [Oryza sativa Japonica Group]
gi|215715378|dbj|BAG95129.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 197
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDDGG DLFVHQ S+KSDGYR+L + VEF V DG+
Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64
Query: 66 QALDVTAPGG-------APVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRR 118
+A+DVTAPGG P G GGG G G
Sbjct: 65 KAVDVTAPGGGALTGGSRPSGGGDRGYGGGGGGGRYGGDRGYGGGGGGYGGGDRGYGGGG 124
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTS-------------NRRNSNYNNNSGGCYNCGD 165
GGG G G CY C GH+AR+C+ R GGCYNCG+
Sbjct: 125 GYGGGGGGGSRACYKCGEEGHMARDCSQGGGGGGGYGGGGGGYRGGGGGGGGGGCYNCGE 184
Query: 166 PEHFARDCPRQ 176
H AR+CP +
Sbjct: 185 TGHIARECPSK 195
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 18/56 (32%)
Query: 216 CYNCGKSGHLARDCG------------------AGGAGGGGSCFNCGKPGHFAREC 253
CY CG+ GH+ARDC GG GGGG C+NCG+ GH AREC
Sbjct: 137 CYKCGEEGHMARDCSQGGGGGGGYGGGGGGYRGGGGGGGGGGCYNCGETGHIAREC 192
>gi|125560025|gb|EAZ05473.1| hypothetical protein OsI_27689 [Oryza sativa Indica Group]
Length = 193
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 97/187 (51%), Gaps = 16/187 (8%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDDGG DLFVHQ S+KSDGYR+L + VEF V DG+
Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+A+DVTAPGG + + + GY GG GG G G D GGGYG
Sbjct: 65 KAVDVTAPGGGALSGGSRPSGGGDRGYGGGGGGGRYGGDRGYGGGYGGGDRGYGGGGGYG 124
Query: 126 PGGV---VCYNCDGVGHVARECTS-------------NRRNSNYNNNSGGCYNCGDPEHF 169
GG CY C GH+AR+C+ R GGCYNCG+ H
Sbjct: 125 GGGGGSRACYKCGEEGHMARDCSQGGGGGGGYGGGGGGYRGGGGGGGGGGCYNCGETGHI 184
Query: 170 ARDCPRQ 176
AR+CP +
Sbjct: 185 ARECPSK 191
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 18/56 (32%)
Query: 216 CYNCGKSGHLARDCG------------------AGGAGGGGSCFNCGKPGHFAREC 253
CY CG+ GH+ARDC GG GGGG C+NCG+ GH AREC
Sbjct: 133 CYKCGEEGHMARDCSQGGGGGGGYGGGGGGYRGGGGGGGGGGCYNCGETGHIAREC 188
>gi|147812546|emb|CAN68380.1| hypothetical protein VITISV_018906 [Vitis vinifera]
Length = 189
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ RSTG V WF G KG+GFI PDDGG DLFVHQ SI+SDG+RTL E ++VEF V
Sbjct: 1 MAESKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A++VTA G+ S G
Sbjct: 61 EDGRTKAVEVTAVRGS---YSSGVGVVVMVDTVAAVMVVVVVVVVGYGRGVRGGRRSGRT 117
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC 144
GYG GG CYNC GH+AR+C
Sbjct: 118 DDGYGGGG-ACYNCGRTGHLARDC 140
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 209 GGGGGGRCYNCGKSGHLARDC 229
G GGGG CYNCG++GHLARDC
Sbjct: 120 GYGGGGACYNCGRTGHLARDC 140
>gi|302760539|ref|XP_002963692.1| hypothetical protein SELMODRAFT_451445 [Selaginella moellendorffii]
gi|300168960|gb|EFJ35563.1| hypothetical protein SELMODRAFT_451445 [Selaginella moellendorffii]
Length = 184
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 92/176 (52%), Gaps = 17/176 (9%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GKV WF +G+GFI PDDG D+FVHQ SI ++G+R+L E + VE+ V+L DG+ +A
Sbjct: 17 GKVKWFSPTRGFGFITPDDGSPDIFVHQTSIHAEGFRSLREGEIVEYVVELGQDGRMRAG 76
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNND-------SRRNNG 121
+VT P GA V + + + G + GG GG SR
Sbjct: 77 NVTGPKGAFVEGAAREDDGSGGGNGSVSNSAGGYNNNRGGRGGARGRGRGMGMVSRGGGI 136
Query: 122 GGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
GG G C+NC+ GH+AR+C+ R GCY+CG HFARDCP Q
Sbjct: 137 GGGFGYGGGRCFNCNEPGHLARDCSVAR---------AGCYSCGKQGHFARDCPNQ 183
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
RC+NC + GHLARDC AG C++CGK GHFAR+C
Sbjct: 146 RCFNCNEPGHLARDCSVARAG----CYSCGKQGHFARDC 180
>gi|297735007|emb|CBI17369.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MAQ RSTG V WF KG+GFI P++GG DLFVHQ SIKSDG+R+L E ++VEF + L
Sbjct: 1 MAQ-ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLG 59
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNN 85
DG+ +A+DVT P G+ V SK +N
Sbjct: 60 EDGRTKAVDVTGPDGSSVQGSKRDN 84
>gi|384254153|gb|EIE27627.1| CSD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 237
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%)
Query: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEAD 62
Q T+STG V WF+ +KG+GFI P+DGG DLFVHQ SI ++G+R+L EN+ VEF V+ D
Sbjct: 9 QPTKSTGTVKWFNSSKGFGFITPEDGGTDLFVHQSSIDAEGFRSLRENEPVEFFVEESED 68
Query: 63 GKYQALDVTAPGGAP 77
G+ +A++VT P GAP
Sbjct: 69 GRTKAVNVTGPDGAP 83
>gi|74835178|dbj|BAE44472.1| Vasa [Botryllus primigenus]
Length = 687
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 76/137 (55%), Gaps = 25/137 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R+C N ++ GC+ CG+ H +RDCP GG +S GC
Sbjct: 54 CYKCGEEGHMSRDCP----NGGGSSRPKGCFKCGEEGHMSRDCP--NGGGDS---RPKGC 104
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR---CYNCGKSGHLARDCGAGGAGGGGS-------- 239
FKCG GH++RDC GGG R C+ CG+ GH++RDC GG GG S
Sbjct: 105 FKCGEEGHMSRDC----PNGGGDSRPKGCFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGS 160
Query: 240 -CFNCGKPGHFARECTK 255
CF CG+ GHF+REC K
Sbjct: 161 GCFKCGEEGHFSRECPK 177
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSN----RRNSNYNNNSGGCYNCGDPEHFARDCP 174
N GG P G C+ C GH++R+C + R+ GC+ CG+ HF+R+CP
Sbjct: 119 NGGGDSRPKG--CFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGSGCFKCGEEGHFSRECP 176
Query: 175 RQQG 178
+ G
Sbjct: 177 KADG 180
>gi|294470714|gb|ADE80749.1| cold shock domain protein 2 [Eutrema salsugineum]
Length = 201
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDD G DLFVHQ SI+SDG+R+L ++SVEF+V+++ +G+
Sbjct: 11 RRRGTVKWFDTQKGFGFITPDDAGDDLFVHQSSIRSDGFRSLAADESVEFEVEMDNNGRP 70
Query: 66 QALDVTAPGGAPVH 79
+A++V+ P GAPV
Sbjct: 71 KAIEVSGPDGAPVQ 84
>gi|324508138|gb|ADY43440.1| DNA-binding protein HEXBP [Ascaris suum]
Length = 172
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNN------SGGCFKCGGYGHLARDCITRGSGGG 211
G CYNCG P HFAR+CP Q+GG Y C++CGGYGH AR+C + GGG
Sbjct: 62 GDCYNCGQPGHFARECPSQRGGGGRYGGRGGGRGGQSECYQCGGYGHFARECPSDRRGGG 121
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
GG +CYNCGK GH++R+C G+ C+NC + GH +REC + A
Sbjct: 122 GGQKCYNCGKFGHISRECPESGSDQSKRCYNCHQIGHISRECPEEA 167
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 19/84 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQGGSNSYNN 185
CY C G GH AREC S+RR GG CYNCG H +R+CP S ++
Sbjct: 100 CYQCGGYGHFARECPSDRR--------GGGGGQKCYNCGKFGHISRECP------ESGSD 145
Query: 186 NSGGCFKCGGYGHLARDCITRGSG 209
S C+ C GH++R+C G
Sbjct: 146 QSKRCYNCHQIGHISRECPEEAMG 169
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 105 GFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCG 164
G+G + + RR GGG GG CYNC GH++REC + ++ S CYNC
Sbjct: 105 GYGHFARECPSDRR--GGG---GGQKCYNCGKFGHISRECPESG-----SDQSKRCYNCH 154
Query: 165 DPEHFARDCPRQQGGSN 181
H +R+CP + G N
Sbjct: 155 QIGHISRECPEEAMGRN 171
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 46/113 (40%), Gaps = 40/113 (35%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCITR----------------------------GSGGGGG 213
S N+ C+KC GH AR+C + GS G
Sbjct: 2 SSNSAEDECYKCHEKGHFARNCPNQESGARRGAGGARHRAACIACVVQSAEYGGSRRVAG 61
Query: 214 GRCYNCGKSGHLARDCGA------------GGAGGGGSCFNCGKPGHFARECT 254
G CYNCG+ GH AR+C + GG GG C+ CG GHFAREC
Sbjct: 62 GDCYNCGQPGHFARECPSQRGGGGRYGGRGGGRGGQSECYQCGGYGHFARECP 114
>gi|393906109|gb|EJD74179.1| hypothetical protein LOAG_18462 [Loa loa]
Length = 145
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C+ GH AR C + + + G C+NCG HFAR+CP Q+GG Y GG
Sbjct: 9 CYKCNEKGHFARNCPTQIQEAVRRGGGGDCFNCGQSGHFARECPNQRGGGRYYGGRGGGR 68
Query: 190 -----CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C++CGG+GH AR+C T R GGGG +CYNCG+ GH++RDC G+ C+NC
Sbjct: 69 SGQSECYQCGGFGHFARECPTERRVGGGGSQKCYNCGRFGHISRDCPDFGSDQSKRCYNC 128
Query: 244 GKPGHFARECTK 255
+ GH +REC +
Sbjct: 129 QQIGHISRECPR 140
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 184 NNNSGGCFKCGGYGHLARDC---ITRGSGGGGGGRCYNCGKSGHLARDC----------- 229
NN+S C+KC GH AR+C I GGGG C+NCG+SGH AR+C
Sbjct: 3 NNDSDRCYKCNEKGHFARNCPTQIQEAVRRGGGGDCFNCGQSGHFARECPNQRGGGRYYG 62
Query: 230 -GAGGAGGGGSCFNCGKPGHFAREC 253
GG G C+ CG GHFAREC
Sbjct: 63 GRGGGRSGQSECYQCGGFGHFAREC 87
>gi|171677448|ref|XP_001903675.1| hypothetical protein [Podospora anserina S mat+]
gi|170936792|emb|CAP61450.1| unnamed protein product [Podospora anserina S mat+]
Length = 229
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 72/147 (48%), Gaps = 28/147 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS-------- 182
CY+C GVGHV EC + R N CY CG P H AR+CP QGG
Sbjct: 59 CYHCQGVGHVQAECPTMRLNGGPGGPHNRCYTCGQPNHIARNCPSAQGGMAPGPMPGRGG 118
Query: 183 YNNNSGG----------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
+ GG C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 119 FGPARGGFHPGGARHATCYKCGGPNHYARDCQAQAM------KCYACGKLGHISRDCTAP 172
Query: 233 GAG----GGGSCFNCGKPGHFARECTK 255
G G +C+ CG+ GH +R+C K
Sbjct: 173 NGGPLNTAGKTCYQCGEAGHISRDCPK 199
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCPRQQGG 179
+ CY C +GH++R+CT+ N N +G CY CG+ H +RDCP++ G
Sbjct: 153 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYQCGEAGHISRDCPKRNGA 203
>gi|170583718|ref|XP_001896707.1| Zinc knuckle family protein [Brugia malayi]
gi|158596020|gb|EDP34440.1| Zinc knuckle family protein [Brugia malayi]
gi|402582762|gb|EJW76707.1| zinc knuckle family protein [Wuchereria bancrofti]
Length = 147
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 9/134 (6%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C+ GH AR C + + + G C+NCG HFAR+CP Q+GG Y GG
Sbjct: 9 CYKCNEKGHFARNCPTQIQEAGRRGAGGDCFNCGQSGHFARECPNQRGGGRYYGGRGGGR 68
Query: 190 -----CFKCGGYGHLARDCITR---GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C++CGG+GH AR+C T G+ GGG +CYNCG+ GH++RDC G+ C+
Sbjct: 69 SGQSECYQCGGFGHFARECPTERRVGAAGGGNQKCYNCGRFGHISRDCPDSGSDQSKRCY 128
Query: 242 NCGKPGHFARECTK 255
NC + GH +REC +
Sbjct: 129 NCQQIGHISRECPR 142
>gi|71418284|ref|XP_810806.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70875395|gb|EAN88955.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH AREC + + + CYNCG P H +R+CP + G+
Sbjct: 16 GGSTCHRCGETGHFARECPNIPPGAMGDR---ACYNCGQPGHLSRECPTRPPGAMGGR-- 70
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGGSCFNCG 244
C+ CG GHL+R+C TR G GG CYNCG+ GHL+R+C G G +C+NCG
Sbjct: 71 --ACYNCGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGVMGDRACYNCG 128
Query: 245 KPGHFARECT 254
+ GH +REC
Sbjct: 129 RMGHLSRECP 138
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC GH++REC + + CYNCG P H +R+CP + G
Sbjct: 68 GGRACYNCGQPGHLSRECPTRPPGAMGGR---ACYNCGQPGHLSRECPTRPPGVM----G 120
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG---GRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+ CG GHL+R+C R +GG G G CY+C + GHLARDC GG +C+NC
Sbjct: 121 DRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNC 180
Query: 244 GKPGHFARECT 254
G+ GH +R C
Sbjct: 181 GQTGHISRACP 191
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++REC + + CYNCG P H +R+CP + G+
Sbjct: 42 GDRACYNCGQPGHLSRECPTRPPGAMGGR---ACYNCGQPGHLSRECPTRPPGAMGGR-- 96
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG-----GGSCF 241
C+ CG GHL+R+C TR G G CYNCG+ GHL+R+C AGG G+C+
Sbjct: 97 --ACYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACY 154
Query: 242 NCGKPGHFARECT 254
+C + GH AR+C
Sbjct: 155 HCQQEGHLARDCP 167
>gi|384254311|gb|EIE27785.1| CSD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ +++TG V WF+ KG+GFI PDDGG DLFVHQ SI +DG+R+L E + VEF V+
Sbjct: 1 MAEASKATGTVKWFNSTKGFGFITPDDGGEDLFVHQTSIITDGFRSLAEGEQVEFYVESG 60
Query: 61 ADGKYQALDVTAPGGAP 77
DG+ +A+ VT PGGAP
Sbjct: 61 DDGRTKAVQVTGPGGAP 77
>gi|357122574|ref|XP_003562990.1| PREDICTED: glycine-rich protein 2b-like [Brachypodium distachyon]
Length = 193
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ R G V WF+ KG+GFI P+DGG DLFVHQ SIKSDG+R+L E +VEF V
Sbjct: 1 MAE--RVKGTVKWFNVEKGFGFITPEDGGEDLFVHQSSIKSDGFRSLDEGATVEFVVGSG 58
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ +A+DVT PGG + + G G GGGG G G
Sbjct: 59 DDGRTKAIDVTGPGGVTLAGGSRGGGGDRYGGGGGGGRYGGGGGDRYGGGGGGYGGGDRY 118
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSN-----------------YNNNSGGCYNC 163
GGG G GG CY C GH+AR+C R S CYNC
Sbjct: 119 GGGGGGGGRGCYTCGEEGHMARDCNMARDCSQGGGGYGGGGGGYGGRGGGGGGGRACYNC 178
Query: 164 GDPEHFARDC 173
G+ H +R+C
Sbjct: 179 GEEGHISREC 188
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 22/65 (33%)
Query: 216 CYNCGKSGHLARDCGAG----------------------GAGGGGSCFNCGKPGHFAREC 253
CY CG+ GH+ARDC G GGG +C+NCG+ GH +REC
Sbjct: 129 CYTCGEEGHMARDCNMARDCSQGGGGYGGGGGGYGGRGGGGGGGRACYNCGEEGHISREC 188
Query: 254 TKVAN 258
T AN
Sbjct: 189 TNRAN 193
>gi|340057209|emb|CCC51551.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 198
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 74/133 (55%), Gaps = 9/133 (6%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CY C GH ARECT+ + + CYNCG P H +R+CP G+
Sbjct: 16 GASSCYRCGEAGHFARECTNVPPGAMGDR---ACYNCGQPGHLSRECPTMPHGAV---GG 69
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG---AGGAGGGGSCFNC 243
+ CF CG +GHL+RDC G GG CYNCG+ GH++RDC G + GG SC+NC
Sbjct: 70 ARACFTCGQFGHLSRDCPGMRGAGFGGRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNC 129
Query: 244 GKPGHFARECTKV 256
GK GH +R+C
Sbjct: 130 GKVGHISRDCPTA 142
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 81/134 (60%), Gaps = 12/134 (8%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C+ C GH++R+C R + + + CYNCG P H +RDCP +GGS S+
Sbjct: 69 GARACFTCGQFGHLSRDCP-GMRGAGFGGRA--CYNCGQPGHISRDCPGMRGGS-SFGGR 124
Query: 187 SGGCFKCGGYGHLARDCIT-RGSGGGGGGR-CYNCGKSGHLARDC----GAGGAGGGGSC 240
S C+ CG GH++RDC T RG+ GG R CY+C + GH+ARDC G GGG+C
Sbjct: 125 S--CYNCGKVGHISRDCPTARGAYGGPQTRSCYHCQQEGHIARDCPNAPADGAVRGGGAC 182
Query: 241 FNCGKPGHFARECT 254
+NCG+PGH +R C
Sbjct: 183 YNCGQPGHISRACP 196
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 75 GAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGF--GGYWKGNNDSRRNNGGGYGPGGVVCY 132
G P H S+ T + G GG A F G + + D G G+G G CY
Sbjct: 50 GQPGHLSRECPTMPH-------GAVGGARACFTCGQFGHLSRDCPGMRGAGFG--GRACY 100
Query: 133 NCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFK 192
NC GH++R+C R S++ S CYNCG H +RDCP +G S C+
Sbjct: 101 NCGQPGHISRDCPGMRGGSSFGGRS--CYNCGKVGHISRDCPTARGAYGGPQTRS--CYH 156
Query: 193 CGGYGHLARDCITRGSGGG--GGGRCYNCGKSGHLARDC 229
C GH+ARDC + G GGG CYNCG+ GH++R C
Sbjct: 157 CQQEGHIARDCPNAPADGAVRGGGACYNCGQPGHISRAC 195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 204 ITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGGSCFNCGKPGHFARECTKVAN 258
+ R G CY CG++GH AR+C GA G +C+NCG+PGH +REC + +
Sbjct: 8 VKRHRAEDGASSCYRCGEAGHFARECTNVPPGAMGDRACYNCGQPGHLSRECPTMPH 64
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
GP CY+C GH+AR+C N G CYNCG P H +R CP
Sbjct: 148 GPQTRSCYHCQQEGHIARDCP-NAPADGAVRGGGACYNCGQPGHISRACP 196
>gi|146104187|ref|XP_001469754.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|398024252|ref|XP_003865287.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
gi|134074124|emb|CAM72866.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|322503524|emb|CBZ38610.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
Length = 271
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 20/147 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSN--YNNNSG------------GCYNCGDPEHFARDC 173
G CYNC GH++R+C S++ S Y G CY CGD H +RDC
Sbjct: 96 GFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDC 155
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARDCGA 231
P QGG + + + C+KCG GH++RDC G G G +CY CG+SGH++R+C +
Sbjct: 156 PNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPS 213
Query: 232 GGAGGGG--SCFNCGKPGHFARECTKV 256
G+ G G +C+ CGKPGH +REC +
Sbjct: 214 AGSNGSGDRTCYKCGKPGHISRECPEA 240
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 103 GAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYN 162
G GGY G R GGYG G CY C GH++R+C N + CY
Sbjct: 117 GGSRGGY--GQKRGRSGAQGGYG-GDRTCYKCGDAGHISRDCP-NGQGGYSGAGDRTCYK 172
Query: 163 CGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKS 222
CGD H +RDCP QGG + + C+KCG GH++R+C + GS G G CY CGK
Sbjct: 173 CGDAGHISRDCPNGQGGYSGAGDRK--CYKCGESGHMSRECPSAGSNGSGDRTCYKCGKP 230
Query: 223 GHLARDCGAGGAGGGG-------SCFNCGKPGHFAREC 253
GH++R+C G GG +C+ CG+ GH +R+C
Sbjct: 231 GHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C NC GH AREC +S + S C+ CG+ H R+CP + + S +
Sbjct: 16 TSCRNCGKEGHYARECPEA--DSKGDGRSTTCFRCGEEGHMTRECPNE---ARSGAAGAM 70
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGHLARDC------------------ 229
CF+CG GH++RDC G G CYNCG+ GHL+RDC
Sbjct: 71 TCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRS 130
Query: 230 -GAGGAGGGGSCFNCGKPGHFAREC 253
GG GG +C+ CG GH +R+C
Sbjct: 131 GAQGGYGGDRTCYKCGDAGHISRDC 155
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-SGGGG 212
+S C NCG H+AR+CP + + S CF+CG GH+ R+C SG G
Sbjct: 12 TESSTSCRNCGKEGHYARECPE---ADSKGDGRSTTCFRCGEEGHMTRECPNEARSGAAG 68
Query: 213 GGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCGKPGHFAREC 253
C+ CG++GH++RDC GA G C+NCG+ GH +R+C
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDC 112
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGG-GGRCYNCGKSGHLARDC---GAGGAGGGGS 239
+S C CG GH AR+C S G G C+ CG+ GH+ R+C GA G +
Sbjct: 12 TESSTSCRNCGKEGHYARECPEADSKGDGRSTTCFRCGEEGHMTRECPNEARSGAAGAMT 71
Query: 240 CFNCGKPGHFARECTKVAN 258
CF CG+ GH +R+C A
Sbjct: 72 CFRCGEAGHMSRDCPNSAK 90
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCP 174
+ G G G CY C GH++REC + + G CY CG+ H +RDCP
Sbjct: 213 SAGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCP 269
>gi|294882220|ref|XP_002769652.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239873234|gb|EER02370.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 69/136 (50%), Gaps = 25/136 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYN-NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C+ GH AR+C +S CYNCG P+H ARDCP +Q N
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDCPNEQ-------TNQRP 71
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC------------GAGGAGGG 237
CFKCG GH ARDC + C+ CG++GHLARDC G G
Sbjct: 72 CFKCGQVGHFARDCTAPDTRA-----CFRCGETGHLARDCPNEDTRPESDRAPRGRGAEG 126
Query: 238 GSCFNCGKPGHFAREC 253
+CF CG+PGHFAR+C
Sbjct: 127 RNCFKCGQPGHFARDC 142
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR----CYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
CF C GH ARDC S GR CYNCGK HLARDC CF CG+
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDC-PNEQTNQRPCFKCGQ 77
Query: 246 PGHFARECT 254
GHFAR+CT
Sbjct: 78 VGHFARDCT 86
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-------CYNCGDPEHFARDCP 174
P C+ C GH+AR+C + + G C+ CG P HFARDCP
Sbjct: 87 APDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDCP 143
>gi|297801940|ref|XP_002868854.1| hypothetical protein ARALYDRAFT_912317 [Arabidopsis lyrata subsp.
lyrata]
gi|297314690|gb|EFH45113.1| hypothetical protein ARALYDRAFT_912317 [Arabidopsis lyrata subsp.
lyrata]
Length = 195
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 98/188 (52%), Gaps = 27/188 (14%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDDGG DLFVHQ SI+S+G+R+L +++VEF+V+++ + +
Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAADEAVEFEVEMDNNSRP 69
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+A+DV+ P G PV N+ G + RGG GGG G G G G G G
Sbjct: 70 KAIDVSGPDGVPV-------LGNSGGSSGGRGGFGGGRGGGRGSGGGYGGGGGYGGRGGG 122
Query: 126 PGGVVCYNCDGVGHVARECTS--------------------NRRNSNYNNNSGGCYNCGD 165
GG CY C GH+AR+C+ G CY+CG+
Sbjct: 123 RGGNDCYKCGEPGHMARDCSDGGGGYGGGGGGYGGGGGNYGGGGGRGGGGGGGSCYSCGE 182
Query: 166 PEHFARDC 173
HFARDC
Sbjct: 183 SGHFARDC 190
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 23/67 (34%)
Query: 190 CFKCGGYGHLARDC-----------------------ITRGSGGGGGGRCYNCGKSGHLA 226
C+KCG GH+ARDC GGGGGG CY+CG+SGH A
Sbjct: 128 CYKCGEPGHMARDCSDGGGGYGGGGGGYGGGGGNYGGGGGRGGGGGGGSCYSCGESGHFA 187
Query: 227 RDCGAGG 233
RDC +GG
Sbjct: 188 RDCTSGG 194
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 25/64 (39%)
Query: 216 CYNCGKSGHLARDCG-------------------------AGGAGGGGSCFNCGKPGHFA 250
CY CG+ GH+ARDC GG GGGGSC++CG+ GHFA
Sbjct: 128 CYKCGEPGHMARDCSDGGGGYGGGGGGYGGGGGNYGGGGGRGGGGGGGSCYSCGESGHFA 187
Query: 251 RECT 254
R+CT
Sbjct: 188 RDCT 191
>gi|356515858|ref|XP_003526614.1| PREDICTED: glycine-rich protein 2b-like [Glycine max]
Length = 176
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 91/185 (49%), Gaps = 27/185 (14%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ RSTG V WF+ KG+GFI P DG DLFVH SI+SDGYR+L + QSVEF +
Sbjct: 1 MAETRRSTGTVKWFNAHKGFGFITPQDGTDDLFVHFTSIRSDGYRSLSDGQSVEFLLDYG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ A+DVT+ + + GG G G GFG G
Sbjct: 61 DDGRTMAVDVTSAVRSRLPGGFRGGGGGRGRGGGRYGGGEGRGRGFGRRGGGPE------ 114
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC-----------TSNRRNSNYNNNSGGCYNCGDPEHF 169
CYNC +GH+AR+C NRR GGC+NCG+ HF
Sbjct: 115 ----------CYNCGRIGHLARDCYHGQGGGGGDDGRNRRRGGGGGGGGGCFNCGEEGHF 164
Query: 170 ARDCP 174
AR+CP
Sbjct: 165 ARECP 169
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 33/58 (56%), Gaps = 16/58 (27%)
Query: 215 RCYNCGKSGHLARDC----------------GAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNCG+ GHLARDC GG GGGG CFNCG+ GHFAREC V
Sbjct: 114 ECYNCGRIGHLARDCYHGQGGGGGDDGRNRRRGGGGGGGGGCFNCGEEGHFARECPNV 171
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 14/60 (23%)
Query: 190 CFKCGGYGHLARDCI--------------TRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
C+ CG GHLARDC RG GGGGGG C+NCG+ GH AR+C G G
Sbjct: 115 CYNCGRIGHLARDCYHGQGGGGGDDGRNRRRGGGGGGGGGCFNCGEEGHFARECPNVGKG 174
>gi|294873524|ref|XP_002766658.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867715|gb|EEQ99375.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 69/136 (50%), Gaps = 25/136 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYN-NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C+ GH AR+C ++ CYNCG P+H ARDCP +Q N
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDCPNEQ-------TNQRP 71
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC------------GAGGAGGG 237
CFKCG GH ARDC + C+ CG++GHLARDC G G
Sbjct: 72 CFKCGQVGHFARDCTAPDTRA-----CFRCGETGHLARDCPNEDTRPESDRAPRGRGAEG 126
Query: 238 GSCFNCGKPGHFAREC 253
+CF CG+PGHFAR+C
Sbjct: 127 RNCFKCGQPGHFARDC 142
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR----CYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
CF C GH ARDC S GR CYNCGK HLARDC CF CG+
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDC-PNEQTNQRPCFKCGQ 77
Query: 246 PGHFARECT 254
GHFAR+CT
Sbjct: 78 VGHFARDCT 86
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-------CYNCGDPEHFARDCP 174
P C+ C GH+AR+C + + G C+ CG P HFARDCP
Sbjct: 87 APDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDCP 143
>gi|71416081|ref|XP_810084.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70874565|gb|EAN88233.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH AREC + + + CYNCG P H +R+CP + G+
Sbjct: 16 GGSTCHRCGETGHFARECPNIPPGAMGDR---ACYNCGQPGHLSRECPTRPPGAMGGR-- 70
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGGSCFNCG 244
C+ CG GHL+R+C TR G GG CYNCG+ GHL+R+C GA G +C+NCG
Sbjct: 71 --ACYNCGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGAMGDRACYNCG 128
Query: 245 KPGHFARECT 254
+ GH + EC
Sbjct: 129 RMGHLSHECP 138
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC GH++REC + + CYNCG P H +R+CP + G+
Sbjct: 68 GGRACYNCGQPGHLSRECPTRPPGAMGGR---ACYNCGQPGHLSRECPTRPPGAM----G 120
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG---GRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+ CG GHL+ +C R +GG G G CY+C + GHLARDC GG +C+NC
Sbjct: 121 DRACYNCGRMGHLSHECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNC 180
Query: 244 GKPGHFARECT 254
G+ GH +R C
Sbjct: 181 GQTGHISRACP 191
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 211 GGGGRCYNCGKSGHLARDCG--AGGAGGGGSCFNCGKPGHFARECT 254
GGG C+ CG++GH AR+C GA G +C+NCG+PGH +REC
Sbjct: 15 GGGSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECP 60
>gi|401420042|ref|XP_003874510.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490746|emb|CBZ26010.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 298
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 20/147 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNR--------RNSNYNNNSGG------CYNCGDPEHFARDC 173
G CY C GH++R+C S++ + N GG CY CGD H +RDC
Sbjct: 96 GFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRNGAQGGYGGDRACYKCGDAGHISRDC 155
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARDCGA 231
P QGG + + + C+KCG GH++RDC G G G +CY CG+SGH++R+C +
Sbjct: 156 PNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHISRECPS 213
Query: 232 GGAGGGG--SCFNCGKPGHFARECTKV 256
G+ G G +C+ CGKPGH +REC +
Sbjct: 214 AGSTGSGDRTCYKCGKPGHISRECPEA 240
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 83/162 (51%), Gaps = 14/162 (8%)
Query: 103 GAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYN 162
G GGY G R GGYG G CY C GH++R+C N + CY
Sbjct: 117 GGSRGGY--GQKRGRNGAQGGYG-GDRACYKCGDAGHISRDCP-NGQGGYSGAGDRTCYK 172
Query: 163 CGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKS 222
CGD H +RDCP QGG + + C+KCG GH++R+C + GS G G CY CGK
Sbjct: 173 CGDAGHISRDCPNGQGGYSGAGDRK--CYKCGESGHISRECPSAGSTGSGDRTCYKCGKP 230
Query: 223 GHLARDCGAGGAGGGG--------SCFNCGKPGHFARECTKV 256
GH++R+C G GG +C+ CG+ GH +REC
Sbjct: 231 GHISRECPEAGGSYGGSRGGGSDRTCYKCGEAGHMSRECPSA 272
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NC GH AREC +S + S C+ CG+ H +R+CP + + S + C
Sbjct: 18 CRNCGKEGHYARECPEA--DSKGDERSSTCFRCGEEGHMSRECPNE---ARSGAAGAMTC 72
Query: 191 FKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGHLARDC-------------------G 230
F+CG GH++RDC G G CY CG+ GHL+RDC
Sbjct: 73 FRCGEAGHMSRDCPNSAKQGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRNGA 132
Query: 231 AGGAGGGGSCFNCGKPGHFAREC 253
GG GG +C+ CG GH +R+C
Sbjct: 133 QGGYGGDRACYKCGDAGHISRDC 155
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-SGGGG 212
+S GC NCG H+AR+CP + + S CF+CG GH++R+C SG G
Sbjct: 12 TESSTGCRNCGKEGHYARECPE---ADSKGDERSSTCFRCGEEGHMSRECPNEARSGAAG 68
Query: 213 GGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCGKPGHFAREC 253
C+ CG++GH++RDC GA G C+ CG+ GH +R+C
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKQGAAKGFECYKCGQEGHLSRDC 112
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 119 NNGGGY-GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
N GGY G G CY C GH++REC S + + CY CG P H +R+CP
Sbjct: 185 NGQGGYSGAGDRKCYKCGESGHISRECPSAGSTGSGDRT---CYKCGKPGHISRECPEAG 241
Query: 178 GGSNSYNNNSGG--CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
G C+KCG GH++R+C + G G G CY CG++GH++RDC
Sbjct: 242 GSYGGSRGGGSDRTCYKCGEAGHMSRECPSAGGTGSGDRACYKCGEAGHISRDC 295
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGG-GGRCYNCGKSGHLARDC---GAGGAGGGGS 239
+S GC CG GH AR+C S G C+ CG+ GH++R+C GA G +
Sbjct: 12 TESSTGCRNCGKEGHYARECPEADSKGDERSSTCFRCGEEGHMSRECPNEARSGAAGAMT 71
Query: 240 CFNCGKPGHFARECTKVAN 258
CF CG+ GH +R+C A
Sbjct: 72 CFRCGEAGHMSRDCPNSAK 90
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
CY C GH++REC S + CY CG+ H +RDCP
Sbjct: 255 TCYKCGEAGHMSRECPSA---GGTGSGDRACYKCGEAGHISRDCP 296
>gi|729704|sp|Q04832.1|HEXP_LEIMA RecName: Full=DNA-binding protein HEXBP; AltName:
Full=Hexamer-binding protein
gi|159342|gb|AAA29245.1| HEXBP DNA binding protein [Leishmania major]
Length = 271
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 20/147 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSN--YNNNSG------------GCYNCGDPEHFARDC 173
G CY C GH++R+C S++ S Y G CY CGD H +RDC
Sbjct: 96 GFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDC 155
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARDCGA 231
P QGG + + + C+KCG GH++RDC G G G +CY CG+SGH++R+C +
Sbjct: 156 PNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPS 213
Query: 232 GGAGGGG--SCFNCGKPGHFARECTKV 256
G+ G G +C+ CGKPGH +REC +
Sbjct: 214 AGSTGSGDRACYKCGKPGHISRECPEA 240
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 103 GAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYN 162
G GGY G R GGY G CY C GH++R+C N + CY
Sbjct: 117 GGSRGGY--GQKRGRSGAQGGYS-GDRTCYKCGDAGHISRDCP-NGQGGYSGAGDRTCYK 172
Query: 163 CGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKS 222
CGD H +RDCP QGG + + C+KCG GH++R+C + GS G G CY CGK
Sbjct: 173 CGDAGHISRDCPNGQGGYSGAGDRK--CYKCGESGHMSRECPSAGSTGSGDRACYKCGKP 230
Query: 223 GHLARDCGAGGAGGGG-------SCFNCGKPGHFAREC 253
GH++R+C G GG +C+ CG+ GH +R+C
Sbjct: 231 GHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 25/145 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C NC GH AREC +S + S C+ CG+ H +R+CP + + S +
Sbjct: 16 TSCRNCGKEGHYARECPEA--DSKGDERSTTCFRCGEEGHMSRECPNE---ARSGAAGAM 70
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGHLARDC------------------ 229
CF+CG GH++RDC G G CY CG+ GHL+RDC
Sbjct: 71 TCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRS 130
Query: 230 -GAGGAGGGGSCFNCGKPGHFAREC 253
GG G +C+ CG GH +R+C
Sbjct: 131 GAQGGYSGDRTCYKCGDAGHISRDC 155
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-SGGGG 212
+S C NCG H+AR+CP + + S CF+CG GH++R+C SG G
Sbjct: 12 TESSTSCRNCGKEGHYARECPE---ADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAG 68
Query: 213 GGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCGKPGHFAREC 253
C+ CG++GH++RDC GA G C+ CG+ GH +R+C
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDC 112
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGG-GGRCYNCGKSGHLARDC---GAGGAGGGGS 239
+S C CG GH AR+C S G C+ CG+ GH++R+C GA G +
Sbjct: 12 TESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMT 71
Query: 240 CFNCGKPGHFARECTKVAN 258
CF CG+ GH +R+C A
Sbjct: 72 CFRCGEAGHMSRDCPNSAK 90
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG--GCYNCGDPEHFARDCP 174
+ G G G CY C GH++REC + + G CY CG+ H +RDCP
Sbjct: 213 SAGSTGSGDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCP 269
>gi|3661541|gb|AAC61751.1| poly-zinc finger protein 1 [Trypanosoma cruzi]
Length = 193
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC GH +REC + + CYNCG P H +R+CP + G+
Sbjct: 68 GGRACYNCGQPGHPSRECPTRPPGAMGGR---ACYNCGQPGHLSRECPTRPPGTMGDR-- 122
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG---GRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+KCG GHL+R+C R +GG G G CY+C + GHLARDC GG +C+NC
Sbjct: 123 --ACYKCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNC 180
Query: 244 GKPGHFARECT 254
G+ GH +R C
Sbjct: 181 GQTGHTSRACP 191
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH AREC + + + CYNCG P H +R CP + G+
Sbjct: 16 GGSTCHRCGETGHFARECPNIPPGAMGDR---ACYNCGQPGHLSRGCPTRPPGAMGGR-- 70
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG--SCFNCG 244
C+ CG GH +R+C TR G GG CYNCG+ GHL+R+C G G +C+ CG
Sbjct: 71 --ACYNCGQPGHPSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGTMGDRACYKCG 128
Query: 245 KPGHFARECT 254
+ GH +REC
Sbjct: 129 RMGHLSRECP 138
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 140 VARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHL 199
+A E N+R C+ CG+ HFAR+CP G+ C+ CG GHL
Sbjct: 1 MAEEIPMNKR-PRIEGGGSTCHRCGETGHFARECPNIPPGAMGDR----ACYNCGQPGHL 55
Query: 200 ARDCITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGGSCFNCGKPGHFARECT 254
+R C TR G GG CYNCG+ GH +R+C GA GG +C+NCG+PGH +REC
Sbjct: 56 SRGCPTRPPGAMGGRACYNCGQPGHPSRECPTRPPGAMGGRACYNCGQPGHLSRECP 112
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R C + + CYNCG P H +R+CP + G+
Sbjct: 45 ACYNCGQPGHLSRGCPTRPPGAMGGR---ACYNCGQPGHPSRECPTRPPGAMGGR----A 97
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG-----GGSCFNCG 244
C+ CG GHL+R+C TR G G CY CG+ GHL+R+C AGG G+C++C
Sbjct: 98 CYNCGQPGHLSRECPTRPPGTMGDRACYKCGRMGHLSRECPNRPAGGFRGVARGACYHCQ 157
Query: 245 KPGHFARECT 254
+ GH AR+C
Sbjct: 158 QEGHLARDCP 167
>gi|356509444|ref|XP_003523459.1| PREDICTED: uncharacterized protein LOC100815731 [Glycine max]
Length = 170
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 88/188 (46%), Gaps = 38/188 (20%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ RSTG V WF+ KG+GFI P DG DLFVH SI+SDGYR+L E QSVEF +
Sbjct: 1 MAESRRSTGTVKWFNSQKGFGFITPQDGTDDLFVHFTSIRSDGYRSLSEGQSVEFLLDYG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ A+DVT+ R GF G R
Sbjct: 61 DDGRTMAVDVTS------------------------AVRSRRPGGFRGGGGRGRGGGRGG 96
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC--------------TSNRRNSNYNNNSGGCYNCGDP 166
G G GG CYNC +GH+AR+C + RR GC+NCG+
Sbjct: 97 GFGRRGGGPECYNCGRIGHLARDCYHGQGGGGGVDGDGRNRRRGGGGGGGGRGCFNCGEE 156
Query: 167 EHFARDCP 174
HF R+CP
Sbjct: 157 GHFVRECP 164
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 32/60 (53%), Gaps = 19/60 (31%)
Query: 216 CYNCGKSGHLARDC-------------------GAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNCG+ GHLARDC G GG GGG CFNCG+ GHF REC V
Sbjct: 107 CYNCGRIGHLARDCYHGQGGGGGVDGDGRNRRRGGGGGGGGRGCFNCGEEGHFVRECPDV 166
>gi|302800247|ref|XP_002981881.1| hypothetical protein SELMODRAFT_154869 [Selaginella moellendorffii]
gi|300150323|gb|EFJ16974.1| hypothetical protein SELMODRAFT_154869 [Selaginella moellendorffii]
Length = 182
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 97/198 (48%), Gaps = 27/198 (13%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TGKV WF+ KG+GFI PDDG +LFVHQ +I ++G+R+L E + VEF V+ D +
Sbjct: 8 KRTGKVKWFNVTKGFGFITPDDGSEELFVHQSAIFAEGFRSLREGEIVEFSVEQGEDQRM 67
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG 125
+A DVT P G+ V + S + + GG GGG G G G+N
Sbjct: 68 RAADVTGPDGSHVQGAP-------SSFGSRGGGGGGGRGGRGRAGGGDN----------- 109
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
+VCYNC+ GHV+R+C Y GG G R G
Sbjct: 110 --PIVCYNCNEAGHVSRDC-------KYQQEGGGGGGGGGGGRGPPSGRRGGGAGGGSGG 160
Query: 186 NSGGCFKCGGYGHLARDC 203
GCF CG GH++RDC
Sbjct: 161 GGRGCFTCGAQGHISRDC 178
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 62/122 (50%), Gaps = 25/122 (20%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGS-----NSYNNNSGGCFKCGGYGHLARDC-------- 203
SG C+ C P HF+R+CP+Q+ S + N NSG CFKC GH +RDC
Sbjct: 876 SGLCFKCNQPGHFSRECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRDCPGQAANSY 935
Query: 204 -ITRGSGGGGGGRCYNCGKSGHLARDCGAGGA-----------GGGGSCFNCGKPGHFAR 251
+ G G G CY C ++GH ARDC A G G C+ C +PGHFAR
Sbjct: 936 GASAGVNAGAAGLCYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCYKCNQPGHFAR 995
Query: 252 EC 253
+C
Sbjct: 996 DC 997
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 61/122 (50%), Gaps = 24/122 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNS------NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
+C+ C+ GH +REC S N N NSG C+ C P HF+RDCP Q +NSY
Sbjct: 878 LCFKCNQPGHFSRECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRDCPGQ--AANSY 935
Query: 184 NNNSGG-------CFKCGGYGHLARDC---------ITRGSGGGGGGRCYNCGKSGHLAR 227
++G C+KC GH ARDC + G+ G G CY C + GH AR
Sbjct: 936 GASAGVNAGAAGLCYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCYKCNQPGHFAR 995
Query: 228 DC 229
DC
Sbjct: 996 DC 997
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG-GAGGG 237
+ S S C CG H ++C SG+ A G+ G G
Sbjct: 823 ATPSITRYSQNCSVCGSSEHSVQNC------PAVAMDMQQPAASGYAASSYGSSPGEAGS 876
Query: 238 GSCFNCGKPGHFARECTK 255
G CF C +PGHF+REC +
Sbjct: 877 GLCFKCNQPGHFSRECPQ 894
>gi|157876792|ref|XP_001686738.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129813|emb|CAJ09119.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 271
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 20/147 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSN--YNNNSG------------GCYNCGDPEHFARDC 173
G CY C GH++R+C S++ S Y G CY CGD H +RDC
Sbjct: 96 GFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDC 155
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARDCGA 231
P QGG + + + C+KCG GH++RDC G G G +CY CG+SGH++R+C +
Sbjct: 156 PNGQGGYSGAGDRT--CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPS 213
Query: 232 GGAGGGG--SCFNCGKPGHFARECTKV 256
G+ G +C+ CGKPGH +REC +
Sbjct: 214 AGSTGSSDRACYKCGKPGHISRECPEA 240
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 103 GAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYN 162
G GGY G R GGY G CY C GH++R+C N + CY
Sbjct: 117 GGSRGGY--GQKRGRSGAQGGYS-GDRTCYKCGDAGHISRDCP-NGQGGYSGAGDRTCYK 172
Query: 163 CGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKS 222
CGD H +RDCP QGG + + C+KCG GH++R+C + GS G CY CGK
Sbjct: 173 CGDAGHISRDCPNGQGGYSGAGDRK--CYKCGESGHMSRECPSAGSTGSSDRACYKCGKP 230
Query: 223 GHLARDCGAGGAGGGG-------SCFNCGKPGHFAREC 253
GH++R+C G GG +C+ CG+ GH +R+C
Sbjct: 231 GHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 25/145 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C NC GH AREC +S + S C+ CG+ H +R+CP + + S +
Sbjct: 16 TSCRNCGKEGHYARECPEA--DSKGDERSTTCFRCGEEGHMSRECPNE---ARSGAAGAM 70
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGHLARDC------------------ 229
CF+CG GH++RDC G G CY CG+ GHL+RDC
Sbjct: 71 TCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRS 130
Query: 230 -GAGGAGGGGSCFNCGKPGHFAREC 253
GG G +C+ CG GH +R+C
Sbjct: 131 GAQGGYSGDRTCYKCGDAGHISRDC 155
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-SGGGG 212
+S C NCG H+AR+CP + + S CF+CG GH++R+C SG G
Sbjct: 12 TESSTSCRNCGKEGHYARECPE---ADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAG 68
Query: 213 GGRCYNCGKSGHLARDC---GAGGAGGGGSCFNCGKPGHFAREC 253
C+ CG++GH++RDC GA G C+ CG+ GH +R+C
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDC 112
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGG-GGRCYNCGKSGHLARDC---GAGGAGGGGS 239
+S C CG GH AR+C S G C+ CG+ GH++R+C GA G +
Sbjct: 12 TESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMT 71
Query: 240 CFNCGKPGHFARECTKVAN 258
CF CG+ GH +R+C A
Sbjct: 72 CFRCGEAGHMSRDCPNSAK 90
>gi|221114884|ref|XP_002154581.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1 [Hydra
magnipapillata]
gi|449665534|ref|XP_004206169.1| PREDICTED: DNA-binding protein HEXBP-like isoform 2 [Hydra
magnipapillata]
Length = 209
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C GH AR CT + CY CG+ H +RDC + G S N +S
Sbjct: 3 TCYKCGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRT 62
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH++RDC RG G G RCY CGK GH ARDC G C+ CGK GH
Sbjct: 63 CYSCGRSGHISRDCTQRG-GRKGKQRCYRCGKDGHFARDC----EGEEEMCYTCGKAGHI 117
Query: 250 AREC 253
++C
Sbjct: 118 KKDC 121
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 130 VCYNCDGVGHVARECTS-------NR-----RNSNYNNNSGG----CYNCGDPEHFARDC 173
CY+C GH++R+CT R ++ ++ + G CY CG H +DC
Sbjct: 62 TCYSCGRSGHISRDCTQRGGRKGKQRCYRCGKDGHFARDCEGEEEMCYTCGKAGHIKKDC 121
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR-GSGGGGGGRCYNCGKSGHLARDC--G 230
P + ++S N C+ C GH AR+C + S CY C + GH ARDC
Sbjct: 122 PESESFTSSTNEQV--CYHCNKPGHFARECAEKDDSSRERDVTCYKCNEKGHFARDCHNK 179
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKVAN 258
+ G +CF C + GHFAR+CT+ +
Sbjct: 180 SNDKKNGNTCFKCHQVGHFARDCTEAED 207
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 76 APVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCD 135
P S ++TN Y+ N+ G F +DS R V CY C+
Sbjct: 121 CPESESFTSSTNEQVCYHCNKPGH------FARECAEKDDSSRERD-------VTCYKCN 167
Query: 136 GVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GH AR+C N+ N N N+ C+ C HFARDC + S
Sbjct: 168 EKGHFARDC-HNKSNDKKNGNT--CFKCHQVGHFARDCTEAEDDS 209
>gi|444314443|ref|XP_004177879.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
gi|387510918|emb|CCH58360.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
Length = 173
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 76/139 (54%), Gaps = 35/139 (25%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN-----SYNN 185
CY C GHV ECT+ R CY+CG+ H +RDCP G SN ++N
Sbjct: 50 CYACGETGHVRSECTAQR-----------CYSCGETGHMSRDCP--SGNSNGRRGGRFHN 96
Query: 186 NSGG-------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
N GG C+KCGG H+ARDC+ S +CY+CGK GHLARDC A G GG
Sbjct: 97 NRGGAGGSRVSCYKCGGPNHMARDCLQSES------KCYSCGKFGHLARDCPASGMSGGA 150
Query: 239 S----CFNCGKPGHFAREC 253
S C+ CG+ GH +R+C
Sbjct: 151 SNDRVCYACGESGHISRDC 169
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 43/133 (32%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG----------------CFKCGGYGH 198
N+ CY CG H A DC ++ YN N G C+ CG GH
Sbjct: 2 NSQKACYVCGKIGHLADDCESEK---LCYNCNQPGHLQSECTMERTAEFKQCYACGETGH 58
Query: 199 LARDCITRGSGGGGGGRCYNCGKSGHLARDCGA---------------GGAGGG-GSCFN 242
+ +C + RCY+CG++GH++RDC + GGAGG SC+
Sbjct: 59 VRSECTAQ--------RCYSCGETGHMSRDCPSGNSNGRRGGRFHNNRGGAGGSRVSCYK 110
Query: 243 CGKPGHFARECTK 255
CG P H AR+C +
Sbjct: 111 CGGPNHMARDCLQ 123
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 112 GNNDSRR-----NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDP 166
GN++ RR NN GG G V CY C G H+AR+C + CY+CG
Sbjct: 84 GNSNGRRGGRFHNNRGGAGGSRVSCYKCGGPNHMARDCLQSESK---------CYSCGKF 134
Query: 167 EHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR 206
H ARDCP G + +N C+ CG GH++RDC ++
Sbjct: 135 GHLARDCP--ASGMSGGASNDRVCYACGESGHISRDCPSK 172
>gi|345561223|gb|EGX44319.1| hypothetical protein AOL_s00193g47 [Arthrobotrys oligospora ATCC
24927]
Length = 180
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 77/144 (53%), Gaps = 24/144 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ----GGSNSYNNN 186
CY+C G+GHV +C + R N SG CY+CG P H AR+CP Q GG N NN
Sbjct: 12 CYHCQGLGHVQADCPTLRINGGAT--SGRCYSCGQPGHLARNCPGNQRFQGGGFNGRNNM 69
Query: 187 SG--------GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG--- 235
G C+KCGG H ARDC + +CY CGK GH++RDC A G
Sbjct: 70 RGYASAPRPATCYKCGGPNHYARDCQAQAM------KCYACGKLGHISRDCTAPNGGPLN 123
Query: 236 -GGGSCFNCGKPGHFARECTKVAN 258
G +C+ CG+ GH +R+C + A
Sbjct: 124 TAGKTCYRCGEAGHISRDCPQNAT 147
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 118 RNNGGGYG--PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
RNN GY P CY C G H AR+C + + CY CG H +RDC
Sbjct: 66 RNNMRGYASAPRPATCYKCGGPNHYARDCQA---------QAMKCYACGKLGHISRDCTA 116
Query: 176 QQGGSNSYNNNSGGCFKCGGYGHLARDC 203
GG N C++CG GH++RDC
Sbjct: 117 PNGG--PLNTAGKTCYRCGEAGHISRDC 142
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCPRQQGGSN 181
+ CY C +GH++R+CT+ N N +G CY CG+ H +RDCP+ SN
Sbjct: 98 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYRCGEAGHISRDCPQNATTSN 150
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 215 RCYNCGKSGHLARDCGAGGAGGG---GSCFNCGKPGHFAREC 253
+CY+C GH+ DC GG G C++CG+PGH AR C
Sbjct: 11 QCYHCQGLGHVQADCPTLRINGGATSGRCYSCGQPGHLARNC 52
>gi|255640679|gb|ACU20624.1| unknown [Glycine max]
Length = 170
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 88/188 (46%), Gaps = 38/188 (20%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA+ RSTG V WF+ KG+GFI P DG DLFVH SI+SDGYR+L E QSVEF +
Sbjct: 1 MAESRRSTGMVKWFNSQKGFGFITPQDGTDDLFVHFTSIRSDGYRSLSEGQSVEFLLDYG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNN 120
DG+ A+DVT+ R GF G R
Sbjct: 61 DDGRTMAVDVTS------------------------AVRSRRPGGFRGGGGRGIGGGRGG 96
Query: 121 GGGYGPGGVVCYNCDGVGHVAREC--------------TSNRRNSNYNNNSGGCYNCGDP 166
G G GG CYNC +GH+AR+C + RR GC+NCG+
Sbjct: 97 GFGRRGGGPECYNCGRIGHLARDCYHGQGGGGGVDGDGRNRRRGGGGGGGGRGCFNCGEE 156
Query: 167 EHFARDCP 174
+F R+CP
Sbjct: 157 GYFVRECP 164
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 32/60 (53%), Gaps = 19/60 (31%)
Query: 216 CYNCGKSGHLARDC-------------------GAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNCG+ GHLARDC G GG GGG CFNCG+ G+F REC V
Sbjct: 107 CYNCGRIGHLARDCYHGQGGGGGVDGDGRNRRRGGGGGGGGRGCFNCGEEGYFVRECPDV 166
>gi|346970998|gb|EGY14450.1| zinc finger protein GIS2 [Verticillium dahliae VdLs.17]
Length = 204
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 74/152 (48%), Gaps = 32/152 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + SG CYNCG P H AR CP G
Sbjct: 34 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYNCGQPGHLARTCPTPAGVGLGRGAPVPRG 91
Query: 179 -------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 92 GYGGFARGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 145
Query: 232 GGAG----GGGSCFNCGKPGHFARECT-KVAN 258
G G +C+ CG+ GH +R+C KVAN
Sbjct: 146 PNGGPLNTAGKTCYQCGEAGHISRDCPQKVAN 177
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 105 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 153
Query: 186 NSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC + + G
Sbjct: 154 AGKTCYQCGEAGHISRDCPQKVANG 178
>gi|297744636|emb|CBI37898.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 59/79 (74%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
++R TG V WF+ KG+GFI PDDGG DLFVHQ SI+S+G+R+L E ++VEF V+ DG
Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60
Query: 64 KYQALDVTAPGGAPVHSSK 82
+ +A+DVT P G PV S+
Sbjct: 61 RTKAVDVTGPDGNPVQGSR 79
>gi|427788709|gb|JAA59806.1| Putative protein self-association [Rhipicephalus pulchellus]
Length = 856
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C+ GH++R+C N + GC+ CG+ H +RDCP S +
Sbjct: 173 GGRACFKCNQEGHMSRDC-PNADSGGGGGRGRGCFKCGEEGHMSRDCPNADSSSGGGRSG 231
Query: 187 SGGCFKCGGYGHLARDCITRGSG---GGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CF 241
GCFKCG GH++RDC S GGGG C+ CG+ GH++RDC + CF
Sbjct: 232 GRGCFKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCPTASSDDRPKRGCF 291
Query: 242 NCGKPGHFAREC 253
NCG+ GH +R+C
Sbjct: 292 NCGEDGHMSRDC 303
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++R+C ++ + GC+ CG+ H +RDCP ++S + GC
Sbjct: 235 CFKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCP----TASSDDRPKRGC 290
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA---------GGGGS-- 239
F CG GH++RDC G C+ CG+ GH++RDC A G GG
Sbjct: 291 FNCGEDGHMSRDCPNPQQERRSKG-CFKCGEEGHMSRDCPNPDAGGGRGGDTSGEGGDRP 349
Query: 240 --CFNCGKPGHFARECT 254
CF C + GH A++CT
Sbjct: 350 RGCFKCQQEGHMAKDCT 366
>gi|218189944|gb|EEC72371.1| hypothetical protein OsI_05633 [Oryza sativa Indica Group]
Length = 131
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA R G V WF+ KG+GFI PDDG DLFVHQ SIK+DG+R+L E + VEF +
Sbjct: 1 MAAAARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADGFRSLAEGEQVEFAISES 60
Query: 61 ADGKYQALDVTAPGGAPV 78
DG+ +A+DVT P G+ V
Sbjct: 61 EDGRTKAVDVTGPDGSFV 78
>gi|241911781|gb|ACS71750.1| RGD1 toxin protein [Lethenteron camtschaticum]
Length = 140
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 131 CYNCDGVGHVARECT---------SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C G GH AREC GCY CG+ H AR+CP Q +
Sbjct: 6 CFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLPQ---D 62
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG-GSC 240
S ++N+ C+ CG GH+AR+C GGG CY CGK GHLAR+C +GG G G C
Sbjct: 63 SVSSNTAACYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLARECSSGGGGPGDNKC 122
Query: 241 FNCGKPGHFARECTKVA 257
+ CG+ GH R+CTK +
Sbjct: 123 YGCGQRGHMQRDCTKAS 139
>gi|270010243|gb|EFA06691.1| hypothetical protein TcasGA2_TC009622 [Tribolium castaneum]
Length = 449
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 127 GGVVCYNCDGVGHVARECTS----NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
G +CY C+ GH AREC+ +N + C+ C H+ARDC
Sbjct: 306 SGSICYKCNQPGHFARECSQPGGREGGRGGFNRSREKCHKCNKTGHYARDC--------- 356
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+S C++C G GH A+DC+ CYNC K GH+AR C GG +C N
Sbjct: 357 -KEDSARCYRCYGEGHFAKDCLQSPDMPS----CYNCRKPGHIARSCPEGGGVANETCHN 411
Query: 243 CGKPGHFARECTK 255
C +PGH +R C +
Sbjct: 412 CQRPGHISRNCPE 424
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 23/125 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AR+C +S CY C HFA+DC + + + C
Sbjct: 343 CHKCNKTGHYARDC---------KEDSARCYRCYGEGHFAKDCLQ--------SPDMPSC 385
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ C GH+AR C GG C+NC + GH++R+C C+ C KPGH
Sbjct: 386 YNCRKPGHIARSC--PEGGGVANETCHNCQRPGHISRNC----PENTKICYLCHKPGHLK 439
Query: 251 RECTK 255
R+C +
Sbjct: 440 RDCQE 444
>gi|400621674|gb|AFP87471.1| vasa-like protein, partial [Nematostella vectensis]
Length = 906
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQGGSN 181
GG C+ C GH AREC N S G C+ C + H+ARDCP Q +
Sbjct: 243 GGRACHKCGEEGHFARECP--------NQPSQGGWCLTCHKCREEGHYARDCPNQ---PS 291
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSC 240
G C KCG GH +R+C + S GGGR C+ CG+ GH +R+C + G G+C
Sbjct: 292 QGMGGGGACHKCGKEGHFSRECPNQDSQRIGGGRNCHKCGQEGHFSRECPNQTSQGSGTC 351
Query: 241 FNCGKPGHFAREC 253
CG+ GHFAREC
Sbjct: 352 HKCGEVGHFAREC 364
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 75/158 (47%), Gaps = 42/158 (26%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ--QGGSNSYN 184
GG C+ C GH +R+C + N C+ CG+ HFAR+CP Q QGG+ +
Sbjct: 167 GGGACHRCGQEGHFSRDCPNP---PTRQGNGRACHKCGEEGHFARECPNQPSQGGARA-- 221
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC--------------- 229
C KCG GH AR+C + S GGG C+ CG+ GH AR+C
Sbjct: 222 -----CHKCGEEGHFARECPNQPSQGGGRA-CHKCGEEGHFARECPNQPSQGGWCLTCHK 275
Query: 230 --------------GAGGAGGGGSCFNCGKPGHFAREC 253
+ G GGGG+C CGK GHF+REC
Sbjct: 276 CREEGHYARDCPNQPSQGMGGGGACHKCGKEGHFSREC 313
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ-----GGSNSY 183
+ C+ C GH AR+C + + S G C+ CG HF+R+CP Q GG N
Sbjct: 271 LTCHKCREEGHYARDCPN--QPSQGMGGGGACHKCGKEGHFSRECPNQDSQRIGGGRN-- 326
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C KCG GH +R+C + S G G C+ CG+ GH AR+C G G +C C
Sbjct: 327 ------CHKCGQEGHFSRECPNQTSQGSGT--CHKCGEVGHFARECPTG-RGQSDTCHKC 377
Query: 244 GKPGHFARECTKVAN 258
G+ GH++REC + N
Sbjct: 378 GETGHYSRECPTLGN 392
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 15/112 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNSYN 184
GG C+ C GH +REC N + GG C+ CG HF+R+CP N +
Sbjct: 296 GGGACHKCGKEGHFSRECP----NQDSQRIGGGRNCHKCGQEGHFSRECP------NQTS 345
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
SG C KCG GH AR+C T G G C+ CG++GH +R+C G GG
Sbjct: 346 QGSGTCHKCGEVGHFARECPT---GRGQSDTCHKCGETGHYSRECPTLGNGG 394
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 208 SGGGGGGRCYNCGKSGHLARDC--GAGGAGGGGSCFNCGKPGHFAREC 253
S GGGG C+ CG+ GH +RDC G G +C CG+ GHFAREC
Sbjct: 163 SDRGGGGACHRCGQEGHFSRDCPNPPTRQGNGRACHKCGEEGHFAREC 210
>gi|98986202|dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis]
Length = 705
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 16/131 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++R+CTS ++ + + C+ CG+ H +RDCP SN+ +S C
Sbjct: 71 CFKCGQEGHMSRDCTSG---ASGDTQAKKCFKCGEEGHMSRDCP-----SNTSTGSSKAC 122
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG------SCFNCG 244
FKCG GH++R+C + C+ CG+ GH++R+C + G +CF CG
Sbjct: 123 FKCGEEGHMSRECPNNNNNNSKA--CFKCGEEGHMSRECPNNNSSKDGFGTSSRACFKCG 180
Query: 245 KPGHFARECTK 255
+ GH +REC K
Sbjct: 181 EEGHMSRECPK 191
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C+ CG H +RDC G + + CFKCG GH++RDC + S G C+
Sbjct: 70 SCFKCGQEGHMSRDCTSGASG----DTQAKKCFKCGEEGHMSRDCPSNTSTGSSKA-CFK 124
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CG+ GH++R+C +CF CG+ GH +REC
Sbjct: 125 CGEEGHMSRECPNNNNNNSKACFKCGEEGHMSREC 159
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++R+C SN +S C+ CG+ H +R+CP N+ NNNS C
Sbjct: 97 CFKCGEEGHMSRDCPSN----TSTGSSKACFKCGEEGHMSRECP------NNNNNNSKAC 146
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR----CYNCGKSGHLARDCGAGG 233
FKCG GH++R+C S G G C+ CG+ GH++R+C G
Sbjct: 147 FKCGEEGHMSRECPNNNSSKDGFGTSSRACFKCGEEGHMSRECPKAG 193
>gi|254569552|ref|XP_002491886.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|238031683|emb|CAY69606.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|328351614|emb|CCA38013.1| Zinc finger protein GIS2 [Komagataella pastoris CBS 7435]
Length = 171
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 16/130 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS--YNNNSG 188
CYNC+ GHV EC ++ + CY+CG HF+R CP S++ ++S
Sbjct: 54 CYNCNETGHVQSECEQPKK-------AAKCYSCGKLGHFSRHCPNSSSASSAGPVASSST 106
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+KC G H ARDC G +CY CGK GH+++DC G G +C+NCG+ GH
Sbjct: 107 ICYKCSGPNHFARDC------QAGSPKCYACGKLGHISKDCTVSG-GSTKACYNCGEQGH 159
Query: 249 FARECTKVAN 258
+R+C A
Sbjct: 160 ISRDCPPTAE 169
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CFKCG GHLA +C CYNC GH + DC C+NC + GH
Sbjct: 10 CFKCGEVGHLAENCQQEQK------LCYNCRAPGHESNDCPEPKQTSSKQCYNCNETGHV 63
Query: 250 ARECTK 255
EC +
Sbjct: 64 QSECEQ 69
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 114 NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
N S ++ G +CY C G H AR+C + S CY CG H ++DC
Sbjct: 91 NSSSASSAGPVASSSTICYKCSGPNHFARDCQA---------GSPKCYACGKLGHISKDC 141
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
GGS + C+ CG GH++RDC
Sbjct: 142 -TVSGGS------TKACYNCGEQGHISRDC 164
>gi|346320729|gb|EGX90329.1| zinc knuckle domain containing protein [Cordyceps militaris CM01]
Length = 296
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 35/154 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CY+C G+GHV +C + R N SG CYNCG P H AR CP G +
Sbjct: 53 CYHCQGLGHVQADCPTLRLTGN--ATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGR 110
Query: 181 -------------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
+ C+KCGG H ARDC + +CY CGK GH++R
Sbjct: 111 GGYAGGNFGGRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISR 164
Query: 228 DCGAGGAG----GGGSCFNCGKPGHFARECTKVA 257
DC A G G +C+ CG+ GH +R+C + A
Sbjct: 165 DCTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKA 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 66/158 (41%), Gaps = 45/158 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSSER---------LCYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC----GAGGAGGG------- 237
C+ C G GH+ DC T R +G GRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGG 112
Query: 238 ------------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 YAGGNFGGRGGFAGGPRPATCYKCGGPNHFARDCQAQA 150
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG N
Sbjct: 128 PRPATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGG--PLNT 176
Query: 186 NSGGCFKCGGYGHLARDCITRGS 208
C++CG GH++RDC + +
Sbjct: 177 AGKTCYQCGEAGHISRDCPQKAA 199
>gi|115385340|ref|XP_001209217.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196909|gb|EAU38609.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 227
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 75/164 (45%), Gaps = 33/164 (20%)
Query: 113 NNDSRRNNGGGYGPG-GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
N+DSR + G G CYNC G+GHV +C + R N +G CYNC P H AR
Sbjct: 21 NSDSRSVHKGLIGSSLAKQCYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLAR 76
Query: 172 DCPRQQGG------------------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
+CP G + C+KCGG H ARDC +
Sbjct: 77 NCPAPASGVGRGAGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQAM----- 131
Query: 214 GRCYNCGKSGHLARDCGAGGAG----GGGSCFNCGKPGHFAREC 253
+CY CGK GH++RDC A G G C+ C + GH +R+C
Sbjct: 132 -KCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCAQAGHISRDC 174
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGG-GSCFNCGKPGHFARECTKVAN 258
G +CYNC GH+ DC G G C+NC +PGH AR C A+
Sbjct: 33 GSSLAKQCYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPAS 83
>gi|407925395|gb|EKG18406.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 244
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 29/147 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + SG CY+CG P H AR CP GG
Sbjct: 80 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYSCGQPGHLARSCPNPAGGVGRGAGIPRGG 137
Query: 180 ------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 138 YGGFRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAPN 191
Query: 234 AG----GGGSCFNCGKPGHFARECTKV 256
G G +C+ CG+ GH +REC +
Sbjct: 192 GGPLNTAGKTCYRCGEAGHISRECPQA 218
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 69/152 (45%), Gaps = 39/152 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 35 ACYKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPHPR------TTETKQ 79
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC--GAGGAGGG--------- 237
C+ C G GH+ DC T R SG G GRCY+CG+ GHLAR C AGG G G
Sbjct: 80 CYHCQGLGHVQADCPTLRLSGAGTSGRCYSCGQPGHLARSCPNPAGGVGRGAGIPRGGYG 139
Query: 238 ------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 140 GFRGGFAGGPRPATCYKCGGPNHFARDCQAQA 171
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 85/247 (34%), Gaps = 43/247 (17%)
Query: 12 TWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVT 71
W G + Y D G L+ ++ + S R Y+ +V ++ + + +
Sbjct: 1 MWTSGNRTYAIRISDTGVPQLYEEERRMSSLSRRACYKCGNVGHYAEVCSSSERLCYNCK 60
Query: 72 APGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVC 131
PG T Y+ G G R + G G C
Sbjct: 61 QPGHESNGCPHPRTTETKQCYHCQ---------GLGHVQADCPTLRLSGAGTSG----RC 107
Query: 132 YNCDGVGHVARECT------------------SNRRNSNYNNNSGGCYNCGDPEHFARDC 173
Y+C GH+AR C R CY CG P HFARDC
Sbjct: 108 YSCGQPGHLARSCPNPAGGVGRGAGIPRGGYGGFRGGFAGGPRPATCYKCGGPNHFARDC 167
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLARDCGA 231
Q + C+ CG GH++RDC G G CY CG++GH++R+C
Sbjct: 168 QAQ----------AMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAGHISRECPQ 217
Query: 232 GGAGGGG 238
G G
Sbjct: 218 AEINGDG 224
>gi|321469269|gb|EFX80250.1| putative germ-line specific RNA helicase vasa protein [Daphnia
pulex]
Length = 761
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++REC ++ + + C+ C P H ARDCP GG C
Sbjct: 131 CYKCGEEGHMSRECPNSNSGGGGGDRT--CHKCQQPGHMARDCPTGGGGGGGDRT----C 184
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
KC GH+ARDC T GGGGG R C+ C ++GH+ARDC GG GG +C CG GH
Sbjct: 185 HKCQQPGHMARDCPT---GGGGGDRACHKCQETGHMARDCPTGGGGGPRTCNKCGDAGHM 241
Query: 250 AREC 253
AREC
Sbjct: 242 AREC 245
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH+AR+C + + C+ C P H ARDCP GG + C
Sbjct: 158 CHKCQQPGHMARDCPTGGGGGGGDRT---CHKCQQPGHMARDCPTGGGGGDR------AC 208
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
KC GH+ARDC T GGGG C CG +GH+AR+C +GG GG CF C K GH
Sbjct: 209 HKCQETGHMARDCPT--GGGGGPRTCNKCGDAGHMARECPSGG-GGDTKCFKCYKLGHST 265
Query: 251 REC 253
+EC
Sbjct: 266 KEC 268
>gi|342882084|gb|EGU82838.1| hypothetical protein FOXB_06641 [Fusarium oxysporum Fo5176]
Length = 181
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 75/159 (47%), Gaps = 45/159 (28%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG------- 179
G CYNC G GH++R+CT +++ CY CG P H +RDCP G
Sbjct: 33 GPAKCYNCGGEGHMSRDCTEPMKDNK------SCYKCGQPGHISRDCPMSGGSGQATECY 86
Query: 180 ---------SNSYNNNSGG----------------CFKCGGYGHLARDCITRGSGGGGGG 214
+ + NN S C+ CGGYGH++R+C+ G
Sbjct: 87 KASLFVLQTTAAANNVSSSYGNNYGGGFGGGAGKTCYSCGGYGHMSRECVN-------GM 139
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+CYNCG+SGH +RDC AGG C+ C +PGH +C
Sbjct: 140 KCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQSQC 178
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
G C+ CG GH ARDC T+G +CYNCG GH++RDC SC+ CG+PG
Sbjct: 14 GACYSCGSTGHQARDCPTKGP-----AKCYNCGGEGHMSRDC-TEPMKDNKSCYKCGQPG 67
Query: 248 HFAREC 253
H +R+C
Sbjct: 68 HISRDC 73
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CY+CG H ARDCP C+ CGG GH++RDC CY
Sbjct: 14 GACYSCGSTGHQARDCP---------TKGPAKCYNCGGEGHMSRDCTEPMKDNKS---CY 61
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CG+ GH++RDC +GG G C K F + T AN
Sbjct: 62 KCGQPGHISRDCPM--SGGSGQATECYKASLFVLQTTAAAN 100
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH++REC N CYNCG+ H++RDCP++ G
Sbjct: 121 TCYSCGGYGHMSRECV----------NGMKCYNCGESGHYSRDCPKESAGGEKI------ 164
Query: 190 CFKCGGYGHLARDCIT 205
C+KC GH+ C +
Sbjct: 165 CYKCQQPGHVQSQCPS 180
>gi|146416071|ref|XP_001484005.1| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 72/157 (45%), Gaps = 42/157 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----- 184
+CYNC GH + EC ++ S CY+CGD H DCP G+ YN
Sbjct: 28 LCYNCRKPGHESTECPEPKQPSQKQ-----CYSCGDLGHVQLDCPTSAQGAKCYNCGQFG 82
Query: 185 --------------------------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
N C+KCGG H ARDC G +CY
Sbjct: 83 HISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC------QAGSLKCYA 136
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CGK+GH+++DC AGG G +C+NCGK GH +R+C +
Sbjct: 137 CGKAGHISKDCNAGGDAGAKTCYNCGKAGHISRDCEE 173
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNS----------NYNNNSGGCYNCGDPEHFARDCPRQQ 177
G CYNC GH+++ C+ R + ++ N CY CG P HFARDC Q
Sbjct: 72 GAKCYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC---Q 128
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
GS C+ CG GH+++DC G G CYNCGK+GH++RDC
Sbjct: 129 AGSLK-------CYACGKAGHISKDC--NAGGDAGAKTCYNCGKAGHISRDC 171
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 43/126 (34%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH+A C R CYNC P H + +CP + S
Sbjct: 8 TCYKCGEVGHLADNCQQTERL---------CYNCRKPGHESTECPEPKQPSQK------- 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
+CY+CG GH+ DC + G C+NCG+ GH
Sbjct: 52 -------------------------QCYSCGDLGHVQLDCPT--SAQGAKCYNCGQFGHI 84
Query: 250 ARECTK 255
++ C++
Sbjct: 85 SKNCSE 90
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA +C CYNC K GH + +C C++CG GH
Sbjct: 9 CYKCGEVGHLADNCQQTER------LCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHV 62
Query: 250 ARECTKVAN 258
+C A
Sbjct: 63 QLDCPTSAQ 71
>gi|190347077|gb|EDK39288.2| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 72/157 (45%), Gaps = 42/157 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----- 184
+CYNC GH + EC ++ S CY+CGD H DCP G+ YN
Sbjct: 28 LCYNCRKPGHESTECPEPKQPSQKQ-----CYSCGDLGHVQSDCPTSAQGAKCYNCGQFG 82
Query: 185 --------------------------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
N C+KCGG H ARDC G +CY
Sbjct: 83 HISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC------QAGSLKCYA 136
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CGK+GH+++DC AGG G +C+NCGK GH +R+C +
Sbjct: 137 CGKAGHISKDCNAGGDAGAKTCYNCGKAGHISRDCEE 173
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNS----------NYNNNSGGCYNCGDPEHFARDCPRQQ 177
G CYNC GH+++ C+ R + ++ N CY CG P HFARDC Q
Sbjct: 72 GAKCYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC---Q 128
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
GS C+ CG GH+++DC G G CYNCGK+GH++RDC
Sbjct: 129 AGSLK-------CYACGKAGHISKDC--NAGGDAGAKTCYNCGKAGHISRDC 171
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 43/126 (34%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH+A C R CYNC P H + +CP + S
Sbjct: 8 TCYKCGEVGHLADNCQQTERL---------CYNCRKPGHESTECPEPKQPSQK------- 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
+CY+CG GH+ DC + G C+NCG+ GH
Sbjct: 52 -------------------------QCYSCGDLGHVQSDCPT--SAQGAKCYNCGQFGHI 84
Query: 250 ARECTK 255
++ C++
Sbjct: 85 SKNCSE 90
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA +C CYNC K GH + +C C++CG GH
Sbjct: 9 CYKCGEVGHLADNCQQTER------LCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHV 62
Query: 250 ARECTKVAN 258
+C A
Sbjct: 63 QSDCPTSAQ 71
>gi|238490081|ref|XP_002376278.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|83770972|dbj|BAE61105.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698666|gb|EED55006.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|391871140|gb|EIT80305.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Aspergillus oryzae 3.042]
Length = 190
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 112 GNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHF 169
G +D RR P CY C GVGH++R+C Y+ +GG CY CG H
Sbjct: 55 GFDDERRE--CTVAPKEKPCYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHI 112
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
AR+C + + Y C+ CGG+GH+ARDC G +CYNCG+ GH++RDC
Sbjct: 113 ARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDCTH-------GQKCYNCGEVGHVSRDC 165
Query: 230 GAGGAGGGGSCFNCGKPGHFAREC 253
+ A G C+ C +PGH C
Sbjct: 166 PS-EARGERVCYKCKQPGHVQAAC 188
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 147 NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG--CFKCGGYGHLARDCI 204
RR CY C H +RDCP+ G + Y+ +GG C+KCG GH+AR+C
Sbjct: 59 ERRECTVAPKEKPCYRCSGVGHISRDCPQAPSG-DGYSGATGGQECYKCGHVGHIARNCS 117
Query: 205 TRGSGGGGGGR----CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
G G G G CY+CG GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 118 QGGYSGDGYGGRQHTCYSCGGHGHMARDCTHGQ-----KCYNCGEVGHVSRDCPSEA 169
>gi|125602074|gb|EAZ41399.1| hypothetical protein OsJ_25920 [Oryza sativa Japonica Group]
Length = 238
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 51/70 (72%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDDGG DLFVHQ S+KSDGYR+L + VEF V DG+
Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64
Query: 66 QALDVTAPGG 75
+A++VTAPGG
Sbjct: 65 KAVNVTAPGG 74
>gi|303285238|ref|XP_003061909.1| cold-shock DNA binding protein [Micromonas pusilla CCMP1545]
gi|226456320|gb|EEH53621.1| cold-shock DNA binding protein [Micromonas pusilla CCMP1545]
Length = 121
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 56/76 (73%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+T++TGKV WF+ KG+GFI PDDG ++FVHQ +I ++G+R+L E + VE+ V+ DG
Sbjct: 1 MTKTTGKVKWFNTQKGFGFITPDDGSEEIFVHQSAIHAEGFRSLREEEPVEYTVEKSDDG 60
Query: 64 KYQALDVTAPGGAPVH 79
+ +A++VT P GA V
Sbjct: 61 RAKAVEVTGPDGAHVQ 76
>gi|429849218|gb|ELA24622.1| zinc knuckle domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 185
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN--NSG 188
CY C GH++R+C +S CY CG+ H AR+CP+ GG NSG
Sbjct: 58 CYRCGQAGHISRDCPQGGNVGGGGASSSECYKCGEVGHIARNCPKSGGGYGGGGACYNSG 117
Query: 189 G--------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
G C+ CGGYGH++RDC G +CYNCG++GH +RDC +GG C
Sbjct: 118 GYGGASQKTCYSCGGYGHMSRDCTN-------GSKCYNCGENGHFSRDCPKESSGGEKIC 170
Query: 241 FNCGKPGHFAREC 253
+ C +PGH +C
Sbjct: 171 YKCQQPGHVQSQC 183
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++R+C +++ CY CG H +RDCP Q G +
Sbjct: 31 GAAKCYNCGNEGHMSRDCPEGPKDTK------SCYRCGQAGHISRDCP-QGGNVGGGGAS 83
Query: 187 SGGCFKCGGYGHLARDCITR--------------GSGGGGGGRCYNCGKSGHLARDCGAG 232
S C+KCG GH+AR+C G GG CY+CG GH++RDC
Sbjct: 84 SSECYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQKTCYSCGGYGHMSRDCT-- 141
Query: 233 GAGGGGSCFNCGKPGHFARECTKVAN 258
G C+NCG+ GHF+R+C K ++
Sbjct: 142 ---NGSKCYNCGENGHFSRDCPKESS 164
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CF CG GH AR+C RG+ +CYNCG GH++RDC G SC+ CG+ GH
Sbjct: 14 CFTCGAAGHQARECPNRGAA-----KCYNCGNEGHMSRDC-PEGPKDTKSCYRCGQAGHI 67
Query: 250 ARECTK 255
+R+C +
Sbjct: 68 SRDCPQ 73
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 17/85 (20%)
Query: 120 NGGGYG-PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
N GGYG CY+C G GH++R+CT N CYNCG+ HF+RDCP++
Sbjct: 115 NSGGYGGASQKTCYSCGGYGHMSRDCT----------NGSKCYNCGENGHFSRDCPKESS 164
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDC 203
G C+KC GH+ C
Sbjct: 165 GGEKI------CYKCQQPGHVQSQC 183
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+GS C+ CG +GH AR+C GA C+NCG GH +R+C +
Sbjct: 4 QGSAAPPARTCFTCGAAGHQARECPNRGA---AKCYNCGNEGHMSRDCPE 50
>gi|156720287|dbj|BAF76796.1| Vasa-related protein [Enchytraeus japonensis]
Length = 990
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 111 KGNNDSRRNNG----GGYGPGGVVCYNCDGVGHVARECTSNRRN-SNYNNNSGGCYNCGD 165
+ ND RN+G G GP CYNC H++R+C R+ SN + CYNCG+
Sbjct: 302 RRTNDGMRNDGMRGEGARGPRA--CYNCGSDAHMSRDCPEPRKERSNDSRPLRACYNCGN 359
Query: 166 PEHFARDC--PRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT----RGSGGGGGGR-CYN 218
H RDC PR++ SN + CF CG H++RDC R + R C+N
Sbjct: 360 EGHMTRDCTEPRKER-SNENSRPPRACFNCGSEAHMSRDCPEPKKERPNDNSRPPRACFN 418
Query: 219 CGKSGHLARDCGAG-----GAGGGGSCFNCGKPGHFARECTKVA 257
CG H++R+C G G CF C GH A++C+K A
Sbjct: 419 CGSEAHMSRECPEPKKEREGGKPSGVCFRCDLEGHMAKDCSKPA 462
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 36/161 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------------------CYNCGDP 166
C+NC GH++R+C RR+ N G CYNCG
Sbjct: 271 CFNCGQDGHMSRDCPEPRRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRACYNCGSD 330
Query: 167 EHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGR----CYNCGK 221
H +RDCP + ++ + C+ CG GH+ RDC R R C+NCG
Sbjct: 331 AHMSRDCPEPRKERSNDSRPLRACYNCGNEGHMTRDCTEPRKERSNENSRPPRACFNCGS 390
Query: 222 SGHLARDCGAGG-------AGGGGSCFNCGKPGHFARECTK 255
H++RDC + +CFNCG H +REC +
Sbjct: 391 EAHMSRDCPEPKKERPNDNSRPPRACFNCGSEAHMSRECPE 431
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 98/279 (35%), Gaps = 106/279 (37%)
Query: 82 KNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVA 141
+NN++ +N N++ G + Y +G++ N GG GP CYNC GH++
Sbjct: 92 QNNSSASNYHQNSSNAGNYNQNSSNAQYGQGDDRRAMNQNGGGGPVRN-CYNCGQSGHMS 150
Query: 142 RECTSNRRNS---------------------------------NYNNNSG---------- 158
R+C R NS +Y+N G
Sbjct: 151 RDCPQTRHNSKPGGDVSRELSDGINKSMVFTSRNPAQRDSHRSSYSNGPGNYVNGAMQRA 210
Query: 159 ---------GCYNCGDPEHFARDCPRQQGGSNSYN--------------------NNSGG 189
GC+NCG H +RDCP+ + + G
Sbjct: 211 GGPSGGGSRGCFNCGQEGHGSRDCPQLSNSGGGNGGGAAGGVNGGGVAGRVSGGGSQNRG 270
Query: 190 CFKCGGYGHLARDCI---------------------------TRGSGGGGGGRCYNCGKS 222
CF CG GH++RDC RG G G CYNCG
Sbjct: 271 CFNCGQDGHMSRDCPEPRRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRACYNCGSD 330
Query: 223 GHLARDCG------AGGAGGGGSCFNCGKPGHFARECTK 255
H++RDC + + +C+NCG GH R+CT+
Sbjct: 331 AHMSRDCPEPRKERSNDSRPLRACYNCGNEGHMTRDCTE 369
>gi|156848103|ref|XP_001646934.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156117616|gb|EDO19076.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 158
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 22/126 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---NSYNNNS 187
CYNC GHV ECT R CYNC H +R+CP + G +S N
Sbjct: 49 CYNCGETGHVKTECTIQR-----------CYNCNQTGHISRECPEPKKGRFSGSSKPNPR 97
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CGG H+A+DC+ GS +CY+CGK GHL++DC +G G C+NC + G
Sbjct: 98 VACYNCGGPNHMAKDCLQTGS------KCYSCGKFGHLSKDCPSG--AGEKVCYNCNQTG 149
Query: 248 HFAREC 253
H +REC
Sbjct: 150 HISREC 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 33/136 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH+A C S + CYNC P H +C + +
Sbjct: 5 ACYICGKLGHLAEGCDSEKL----------CYNCNQPGHVQSEC------TMARTVEHKQ 48
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC---------GAGGAGGGGSC 240
C+ CG GH+ +C + RCYNC ++GH++R+C G+ +C
Sbjct: 49 CYNCGETGHVKTECTIQ--------RCYNCNQTGHISRECPEPKKGRFSGSSKPNPRVAC 100
Query: 241 FNCGKPGHFARECTKV 256
+NCG P H A++C +
Sbjct: 101 YNCGGPNHMAKDCLQT 116
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 17/75 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CYNC G H+A++C CY+CG H ++DCP G YN
Sbjct: 98 VACYNCGGPNHMAKDCL---------QTGSKCYSCGKFGHLSKDCPSGAGEKVCYN---- 144
Query: 189 GCFKCGGYGHLARDC 203
C GH++R+C
Sbjct: 145 ----CNQTGHISREC 155
>gi|294942030|ref|XP_002783361.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239895776|gb|EER15157.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 135
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 69/136 (50%), Gaps = 24/136 (17%)
Query: 130 VCYNCDGVGHVARECTSN-RRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C+ GH AR C +S CYNCG P+H ARDCP+ Q N
Sbjct: 9 ACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQS-------NDR 61
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-----------AGGAGGG 237
CFKC GH ARDC + + C+ CG+SGHLAR+C G GGG
Sbjct: 62 PCFKCQQVGHFARDCPSADTRN-----CFRCGQSGHLARECPNEENNQDNNNNNRGGGGG 116
Query: 238 GSCFNCGKPGHFAREC 253
+CF+CGKPGH AR C
Sbjct: 117 RNCFHCGKPGHLARNC 132
>gi|388500632|gb|AFK38382.1| unknown [Medicago truncatula]
Length = 134
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 55/75 (73%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
++ TGKV WF+ KG+GFI PDDG +LFVHQ I++DG+R+L E +SVE+ ++ + DG+
Sbjct: 4 SKLTGKVKWFNDQKGFGFITPDDGSEELFVHQSQIQTDGFRSLAEGESVEYQIESDNDGR 63
Query: 65 YQALDVTAPGGAPVH 79
+A+ VT P GA V
Sbjct: 64 SKAVSVTGPDGASVQ 78
>gi|71416083|ref|XP_810085.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|51340810|gb|AAU01009.1| nucleic acid binding protein [Trypanosoma cruzi]
gi|70874566|gb|EAN88234.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++REC + + + CYNCG H +R+CP + G+
Sbjct: 9 GSRACYNCGQPGHLSRECPTRPPGAMGDR---ACYNCGRMGHLSRECPTRPPGAM----G 61
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG---GRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+ CG GHL+R+C R +GG G G CY+C + GHLARDC GG +C+NC
Sbjct: 62 DRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNC 121
Query: 244 GKPGHFARECT 254
G+ GH +R C
Sbjct: 122 GQTGHTSRACP 132
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGG 238
N+ S C+ CG GHL+R+C TR G G CYNCG+ GHL+R+C GA G
Sbjct: 4 NAMTRGSRACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPTRPPGAMGDR 63
Query: 239 SCFNCGKPGHFARECT 254
+C+NCG+ GH +REC
Sbjct: 64 ACYNCGRMGHLSRECP 79
>gi|408387760|gb|EKJ67470.1| hypothetical protein FPSE_12389 [Fusarium pseudograminearum CS3096]
Length = 180
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 44/158 (27%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG------- 179
G CYNC G GH++R+CT +++ CY CG P H +RDCP G
Sbjct: 33 GPAKCYNCGGEGHMSRDCTEPMKDNK------SCYKCGQPGHISRDCPMSGGSGQATECY 86
Query: 180 -------------SNSYNNN-----------SGGCFKCGGYGHLARDCITRGSGGGGGGR 215
+SY NN C+ CGG+GH++R+C+ G +
Sbjct: 87 KCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVN-------GMK 139
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+SGH +RDC AGG C+ C +PGH +C
Sbjct: 140 CYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQSQC 177
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CY+CG H ARDCP + C+ CGG GH++RDC CY
Sbjct: 14 GACYSCGSTAHQARDCPTK---------GPAKCYNCGGEGHMSRDCTEPMKDNKS---CY 61
Query: 218 NCGKSGHLARDCG-AGGAGGGGSCFNCGKPGHFARECTKVA 257
CG+ GH++RDC +GG+G C+ CG+ GH AR C K +
Sbjct: 62 KCGQPGHISRDCPMSGGSGQATECYKCGEIGHIARNCNKSS 102
>gi|380494230|emb|CCF33305.1| zinc knuckle [Colletotrichum higginsianum]
Length = 226
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 31/151 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + SG CYNCG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRG 110
Query: 179 -------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 AFGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 164
Query: 232 GGAG----GGGSCFNCGKPGHFARECTKVAN 258
G G +C+ CG+ GH +R+C + A
Sbjct: 165 PNGGPLNTAGKTCYQCGEAGHISRDCPQKAT 195
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 67/154 (43%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGG---AGGGG------- 238
C+ C G GH+ DC T R SG G GRCYNCG+ GHLAR C + G GG
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAF 112
Query: 239 ---------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA 146
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 124 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 172
Query: 186 NSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC + + G
Sbjct: 173 AGKTCYQCGEAGHISRDCPQKATNG 197
>gi|10039329|dbj|BAB13307.1| vasa-related protein CnVAS1 [Hydra vulgaris]
Length = 797
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 20/127 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
C+ C GH++REC + C+ C H +RDCP QGGS GG
Sbjct: 71 CHKCGKEGHMSRECP----DGGGGGGGRACFKCKQEGHMSRDCP--QGGS-------GGG 117
Query: 190 --CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-SCFNCGKP 246
C KCG GH++R+C GGGGG C+ C + GH+++DC G GGG +C CGK
Sbjct: 118 RACHKCGKEGHMSREC---PDGGGGGRACFKCKQEGHMSKDCPQGSGGGGSRTCHKCGKE 174
Query: 247 GHFAREC 253
GH +REC
Sbjct: 175 GHMSREC 181
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KCG GH++R+C G GGGG C+ C + GH++RDC GG+GGG +C CGK GH
Sbjct: 70 ACHKCGKEGHMSRECPDGGGGGGGRA-CFKCKQEGHMSRDCPQGGSGGGRACHKCGKEGH 128
Query: 249 FAREC 253
+REC
Sbjct: 129 MSREC 133
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG----CYNCGDPEHFARDCPRQQGGSNS 182
GG C+ C GH++REC + GG C+ C H ++DCP+ GG S
Sbjct: 116 GGRACHKCGKEGHMSRECP----------DGGGGGRACFKCKQEGHMSKDCPQGSGGGGS 165
Query: 183 YNNNSGGCFKCGGYGHLARDC 203
C KCG GH++R+C
Sbjct: 166 RT-----CHKCGKEGHMSREC 181
>gi|400598844|gb|EJP66551.1| zinc knuckle protein [Beauveria bassiana ARSEF 2860]
Length = 224
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 72/153 (47%), Gaps = 34/153 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY+C G+GHV +C + R N SG CYNCG P H AR CP G + G
Sbjct: 53 CYHCQGLGHVQADCPTLRLTGN--ATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGR 110
Query: 190 ---------------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
C+KCGG H ARDC + +CY CGK GH++RD
Sbjct: 111 GGYAGGNFGRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRD 164
Query: 229 CGAGGAG----GGGSCFNCGKPGHFARECTKVA 257
C A G G +C+ CG+ GH +R+C + A
Sbjct: 165 CTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKA 197
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 68/157 (43%), Gaps = 44/157 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC------------------- 229
C+ C G GH+ DC T R +G GRCYNCG+ GHLAR C
Sbjct: 53 CYHCQGLGHVQADCPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGG 112
Query: 230 ------GAGGAGGG---GSCFNCGKPGHFARECTKVA 257
G GG GG +C+ CG P HFAR+C A
Sbjct: 113 YAGGNFGRGGFAGGPRPATCYKCGGPNHFARDCQAQA 149
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 96 RGGRGGGGAGFGGYWKGNNDSRRNNGGGYG-------PGGVVCYNCDGVGHVARECTSNR 148
RGG GG G GG+ G + GG + CY C +GH++R+CT+
Sbjct: 110 RGGYAGGNFGRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAP- 168
Query: 149 RNSNYNNNSG-GCYNCGDPEHFARDCPRQQGGSNSYNNN 186
N N +G CY CG+ H +RDCP++ + NN
Sbjct: 169 -NGGPLNTAGKTCYQCGEAGHISRDCPQKAAVAPEINNE 206
>gi|145238910|ref|XP_001392102.1| cellular nucleic acid-binding protein [Aspergillus niger CBS
513.88]
gi|134076603|emb|CAK45156.1| unnamed protein product [Aspergillus niger]
Length = 171
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNS 182
P CY C GVGH++REC ++ GG CY CG H AR+CP+ G S
Sbjct: 47 APKEKSCYRCGGVGHISRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGG 106
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+ C+ CGG+GH+ARDC G +CYNCG+ GH++RDC A G C+N
Sbjct: 107 FGGRQQTCYSCGGFGHMARDCTN-------GQKCYNCGEVGHVSRDCPT-EAKGERVCYN 158
Query: 243 CGKPGHFAREC 253
C +PGH C
Sbjct: 159 CKQPGHVQAAC 169
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
GCF CG H ARDC +G+ CYNCG GH++R+C A SC+ CG GH
Sbjct: 9 GCFNCGDASHQARDCPKKGT-----PTCYNCGGQGHVSRECTV--APKEKSCYRCGGVGH 61
Query: 249 FAREC 253
+REC
Sbjct: 62 ISREC 66
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 212 GGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
GGR C+NCG + H ARDC G +C+NCG GH +RECT
Sbjct: 5 AGGRGCFNCGDASHQARDCPKKGT---PTCYNCGGQGHVSRECT 45
>gi|71004674|ref|XP_757003.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
gi|46096697|gb|EAK81930.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
Length = 189
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR----QQGGSNSYNN 185
CY C GH++REC +N + G CY CG H AR CP +GG +
Sbjct: 61 TCYKCSETGHISRECPTNPAPAA-GGPGGECYKCGQHGHIARACPTAGGSSRGGFGGARS 119
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
C+ CGG GHL+R+C + GG RCYNC +SGH++R+C SC+ CG
Sbjct: 120 GGRSCYNCGGVGHLSRECTSPAGAAAGGQRCYNCNESGHISRECPKPQT---KSCYRCGD 176
Query: 246 PGHFARECTKVA 257
GH + C ++A
Sbjct: 177 EGHLSAACPQIA 188
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++ +C CY C + H +R+CP +
Sbjct: 36 GNPSCYNCGQQGHISSQC-------GMEAQPKTCYKCSETGHISRECPTNPAPAAGGPGG 88
Query: 187 SGGCFKCGGYGHLARDCIT--------RGSGGGGGGRCYNCGKSGHLARDC--GAGGAGG 236
C+KCG +GH+AR C T G GG CYNCG GHL+R+C AG A G
Sbjct: 89 E--CYKCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGVGHLSRECTSPAGAAAG 146
Query: 237 GGSCFNCGKPGHFARECTK 255
G C+NC + GH +REC K
Sbjct: 147 GQRCYNCNESGHISRECPK 165
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT--RGSGGGGGGRCY 217
CYNCG H + C C+KC GH++R+C T + GG GG CY
Sbjct: 40 CYNCGQQGHISSQC--------GMEAQPKTCYKCSETGHISRECPTNPAPAAGGPGGECY 91
Query: 218 NCGKSGHLARDCGAG----------GAGGGGSCFNCGKPGHFARECTKVA 257
CG+ GH+AR C GG SC+NCG GH +RECT A
Sbjct: 92 KCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGVGHLSRECTSPA 141
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
+ G GG CYNC+ GH++REC + S CY CGD H + CP+
Sbjct: 138 TSPAGAAAGGQRCYNCNESGHISRECPKPQTKS--------CYRCGDEGHLSAACPQ 186
>gi|219123826|ref|XP_002182218.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406179|gb|EEC46119.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 286
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 6/91 (6%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRP----DDGGADLFVHQKSIKSDG-YRTLYENQSVEFDVQ 58
+++ G V WFD KGYGF+ P ++FVHQ SI+S+G YRTL EN +EFDV+
Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60
Query: 59 LEAD-GKYQALDVTAPGGAPVHSSKNNNTNN 88
EA+ GK++A++VTAPGG P+ + +
Sbjct: 61 KEAESGKFKAINVTAPGGGPIKPPRRTRSKK 91
>gi|378730825|gb|EHY57284.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 231
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 29/145 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CY+C G+GHV +C + R + G CY+CG H AR+CP
Sbjct: 53 CYHCQGLGHVQADCPTLRISGG--PAGGRCYSCGQIGHLARNCPTPSAAPAPRGGRGGYG 110
Query: 181 -------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ NN + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 SGFRGGYSVVNNRAATCYKCGGPNHYARDCQAQAM------KCYACGKLGHISRDCTAPN 164
Query: 234 AG----GGGSCFNCGKPGHFARECT 254
G G +C+ CG+PGH +++CT
Sbjct: 165 GGPLNAAGKTCYKCGQPGHISKDCT 189
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 67/152 (44%), Gaps = 39/152 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A CTS+ R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCTSSERL---------CYNCKQPGHESNQCPLPR------TTETKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------ 236
C+ C G GH+ DC T R SGG GGRCY+CG+ GHLAR+C A
Sbjct: 53 CYHCQGLGHVQADCPTLRISGGPAGGRCYSCGQIGHLARNCPTPSAAPAPRGGRGGYGSG 112
Query: 237 -----------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P H+AR+C A
Sbjct: 113 FRGGYSVVNNRAATCYKCGGPNHYARDCQAQA 144
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 33/142 (23%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRN----------------- 150
G+ + + + R +GG P G CY+C +GH+AR C +
Sbjct: 60 GHVQADCPTLRISGG---PAGGRCYSCGQIGHLARNCPTPSAAPAPRGGRGGYGSGFRGG 116
Query: 151 -SNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--G 207
S NN + CY CG P H+ARDC Q + C+ CG GH++RDC G
Sbjct: 117 YSVVNNRAATCYKCGGPNHYARDCQAQ----------AMKCYACGKLGHISRDCTAPNGG 166
Query: 208 SGGGGGGRCYNCGKSGHLARDC 229
G CY CG+ GH+++DC
Sbjct: 167 PLNAAGKTCYKCGQPGHISKDC 188
>gi|342888969|gb|EGU88180.1| hypothetical protein FOXB_01318 [Fusarium oxysporum Fo5176]
Length = 223
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 71/149 (47%), Gaps = 32/149 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CY+C G+GHV +C + R + SG CYNCG P H AR CP G +
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGT--GTSGRCYNCGQPGHLARACPNPVGPTMGRGAPMGRG 110
Query: 181 ----------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+ C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GFPGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 164
Query: 231 AGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 165 APNGGPLNTAGKTCYQCGEAGHISRDCPQ 193
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 66/155 (42%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC--GAGGAGGGG-------- 238
C+ C G GH+ DC T R SG G GRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPTMGRGAPMGRGGF 112
Query: 239 ----------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 PGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA 147
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 125 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 173
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGG 212
C++CG GH++RDC + + G G
Sbjct: 174 AGKTCYQCGEAGHISRDCPQKNAPGVG 200
>gi|358369000|dbj|GAA85616.1| zinc knuckle domain protein [Aspergillus kawachii IFO 4308]
Length = 144
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSN 181
P CY C GVGH++REC ++ +GG CY CG H AR+CP+ G
Sbjct: 19 APKEKSCYRCGGVGHISRECQASPAEGFGGAAAGGGQECYKCGRVGHIARNCPQSGGYGG 78
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
+ C+ CGG+GH+ARDC G +CYNCG+ GH++RDC A G C+
Sbjct: 79 GFGGRQQTCYSCGGFGHMARDCTN-------GQKCYNCGEVGHVSRDCPT-EAKGERVCY 130
Query: 242 NCGKPGHFAREC 253
NC +PGH C
Sbjct: 131 NCKQPGHVQAAC 142
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 12/77 (15%)
Query: 190 CFKCGGYGHLARDC------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG----- 238
C++CGG GH++R+C G+ GGG CY CG+ GH+AR+C G GGG
Sbjct: 25 CYRCGGVGHISRECQASPAEGFGGAAAGGGQECYKCGRVGHIARNCPQSGGYGGGFGGRQ 84
Query: 239 -SCFNCGKPGHFARECT 254
+C++CG GH AR+CT
Sbjct: 85 QTCYSCGGFGHMARDCT 101
>gi|67423413|dbj|BAD99524.1| VASA RNA helicase [Moina macrocopa]
Length = 843
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++REC + ++ S+ + G CYNC H ++DCP N S G
Sbjct: 229 TCYNCGDSGHMSRECPNPKKESS---SRGTCYNCQQEGHMSKDCP------NPKVERSRG 279
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDCG---AGGAGGGGSC 240
C CG GH+AR+C ++ G GGG C+NCG+ GH ++DC GGGG+C
Sbjct: 280 CRNCGEDGHMARECPSKNGDGNGGGDRGGNRACFNCGEEGHQSKDCEKPRTSKGGGGGAC 339
Query: 241 FNCGKPGHFARECTK 255
F C H A++C +
Sbjct: 340 FRCQSTDHMAKDCPE 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRC 216
S GC+NCGD H +R+CP + NS G C+ CG GH++R+C G C
Sbjct: 201 SRGCFNCGDTNHMSRECPNPKKEGNS----RGTCYNCGDSGHMSRECPNPKKESSSRGTC 256
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
YNC + GH+++DC C NCG+ GH AREC
Sbjct: 257 YNCQQEGHMSKDCPNPKVERSRGCRNCGEDGHMAREC 293
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG- 188
CYNC GH++++C + + S GC NCG+ H AR+CP + G N + G
Sbjct: 255 TCYNCQQEGHMSKDCPNPKVE-----RSRGCRNCGEDGHMARECPSKNGDGNGGGDRGGN 309
Query: 189 -GCFKCGGYGHLARDC-ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CF CG GH ++DC R S GGGGG C+ C + H+A+DC G G P
Sbjct: 310 RACFNCGEEGHQSKDCEKPRTSKGGGGGACFRCQSTDHMAKDCPEPNVGPDGKPRESYVP 369
Query: 247 GHFARE 252
E
Sbjct: 370 PEIQDE 375
>gi|71418282|ref|XP_810805.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|16225904|gb|AAL16022.1|AF420314_1 zinc finger protein PDZ5 [Trypanosoma cruzi]
gi|70875394|gb|EAN88954.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++REC + R + CYNCG H +R+CP + G
Sbjct: 9 GSRACYNCGQPGHLSRECPT--RPPGVMGDRA-CYNCGRMGHLSRECPTRPPGVM----G 61
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG---GRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+ CG GHL+R+C R +GG G G CY+C + GHLARDC GG +C+NC
Sbjct: 62 DRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNC 121
Query: 244 GKPGHFARECT 254
G+ GH +R C
Sbjct: 122 GQTGHTSRACP 132
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGG 238
N+ S C+ CG GHL+R+C TR G G CYNCG+ GHL+R+C G G
Sbjct: 4 NAMTRGSRACYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPTRPPGVMGDR 63
Query: 239 SCFNCGKPGHFARECT 254
+C+NCG+ GH +REC
Sbjct: 64 ACYNCGRMGHLSRECP 79
>gi|2895760|gb|AAC32813.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
gi|2895761|gb|AAC32814.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
Length = 116
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
V CY C GH++REC S CYNCG H +R+CP ++
Sbjct: 3 AAVTCYKCGEAGHMSRECPKA-------AASRTCYNCGQTGHLSRECPSER--------K 47
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+ CG HL+R+C G CYNCG+SGHL+RDC + +C+NCG
Sbjct: 48 PKACYNCGSTEHLSRECPNEAKTGADSRTCYNCGQSGHLSRDCPS--ERKPKACYNCGST 105
Query: 247 GHFAREC 253
H +REC
Sbjct: 106 EHLSREC 112
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R+C CYNCG++GHL+R+C + +C+NCG H
Sbjct: 7 CYKCGEAGHMSREC----PKAAASRTCYNCGQTGHLSRECPS--ERKPKACYNCGSTEHL 60
Query: 250 ARECTKVAN 258
+REC A
Sbjct: 61 SRECPNEAK 69
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 25/95 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-QGGSNS---YN- 184
CYNC GH++REC S R+ CYNCG EH +R+CP + + G++S YN
Sbjct: 28 TCYNCGQTGHLSRECPSERK-------PKACYNCGSTEHLSRECPNEAKTGADSRTCYNC 80
Query: 185 -------------NNSGGCFKCGGYGHLARDCITR 206
C+ CG HL+R+C R
Sbjct: 81 GQSGHLSRDCPSERKPKACYNCGSTEHLSRECPDR 115
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC GH++R+C S R+ CYNCG EH +R+CP
Sbjct: 66 NEAKTGADSRTCYNCGQSGHLSRDCPSERK-------PKACYNCGSTEHLSRECP 113
>gi|322705172|gb|EFY96760.1| zinc knuckle domain containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 223
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + + SG CYNCG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGS--ATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGG 110
Query: 179 --------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
G S C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 FAGGFAGRGGFSGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 164
Query: 231 AGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 165 APNGGPLNTAGKTCYQCGEAGHISRDCPQ 193
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 66/155 (42%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGG-------- 238
C+ C G GH+ DC T R SG GRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFA 112
Query: 239 ----------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGFAGRGGFSGGPRPATCYKCGGPNHFARDCQAQA 147
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 131 CYNCDGVGHVARECT---------------------SNRRNSNYNNNSGGCYNCGDPEHF 169
CYNC GH+AR C + R + CY CG P HF
Sbjct: 80 CYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGPRPATCYKCGGPNHF 139
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLAR 227
ARDC Q + C+ CG GH++RDC G G CY CG++GH++R
Sbjct: 140 ARDCQAQ----------AMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISR 189
Query: 228 DCGAGGAGG 236
DC A G
Sbjct: 190 DCPQKNASG 198
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 125 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 173
Query: 186 NSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC + + G
Sbjct: 174 AGKTCYQCGEAGHISRDCPQKNASG 198
>gi|255073219|ref|XP_002500284.1| cold-shock DNA binding protein [Micromonas sp. RCC299]
gi|226515546|gb|ACO61542.1| cold-shock DNA binding protein [Micromonas sp. RCC299]
Length = 122
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TGKV WF+ KG+GFI PDDG ++FVHQ +I S+G+R+L E++ VEF ++ DG+
Sbjct: 4 KVTGKVKWFNTQKGFGFITPDDGSDEIFVHQTAIHSEGFRSLREDEPVEFVIEKSDDGRT 63
Query: 66 QALDVTAPGGAPVHSSKNNNT 86
+A++VT P GA V + T
Sbjct: 64 KAIEVTGPDGATVQGAPRRMT 84
>gi|46137541|ref|XP_390462.1| hypothetical protein FG10286.1 [Gibberella zeae PH-1]
Length = 185
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 49/163 (30%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG------- 179
G CYNC G GH++R+CT +++ CY CG P H +RDCP G
Sbjct: 33 GPAKCYNCGGEGHMSRDCTEPMKDNK------SCYKCGQPGHISRDCPMSGGSGQATECY 86
Query: 180 ------------------SNSYNNN-----------SGGCFKCGGYGHLARDCITRGSGG 210
+SY NN C+ CGG+GH++R+C+
Sbjct: 87 KASSNCRLLIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVN----- 141
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G +CYNCG+SGH +RDC AGG C+ C +PGH +C
Sbjct: 142 --GMKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQSQC 182
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CY+CG H ARDCP + C+ CGG GH++RDC CY
Sbjct: 14 GACYSCGSTAHQARDCPTK---------GPAKCYNCGGEGHMSRDCTEPMKDNKS---CY 61
Query: 218 NCGKSGHLARDCG-AGGAGGGGSCF----NCG-KPGHFARECTK 255
CG+ GH++RDC +GG+G C+ NC GH AR C K
Sbjct: 62 KCGQPGHISRDCPMSGGSGQATECYKASSNCRLLIGHIARNCNK 105
>gi|322697703|gb|EFY89480.1| zinc knuckle domain containing protein [Metarhizium acridum CQMa
102]
Length = 223
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 32/149 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + + SG CYNCG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGS--ATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGG 110
Query: 179 --------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
G S C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 FAGGFAGRGGFSGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 164
Query: 231 AGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 165 APNGGPLNTAGKTCYQCGEAGHISRDCPQ 193
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 66/155 (42%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGG-------- 238
C+ C G GH+ DC T R SG GRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFA 112
Query: 239 ----------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGFAGRGGFSGGPRPATCYKCGGPNHFARDCQAQA 147
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 54/129 (41%), Gaps = 33/129 (25%)
Query: 131 CYNCDGVGHVARECT---------------------SNRRNSNYNNNSGGCYNCGDPEHF 169
CYNC GH+AR C + R + CY CG P HF
Sbjct: 80 CYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGPRPATCYKCGGPNHF 139
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLAR 227
ARDC Q + C+ CG GH++RDC G G CY CG++GH++R
Sbjct: 140 ARDCQAQ----------AMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISR 189
Query: 228 DCGAGGAGG 236
DC A G
Sbjct: 190 DCPQKNASG 198
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 125 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 173
Query: 186 NSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC + + G
Sbjct: 174 AGKTCYQCGEAGHISRDCPQKNASG 198
>gi|400594711|gb|EJP62544.1| cellular nucleic acid-binding protein [Beauveria bassiana ARSEF
2860]
Length = 179
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 24/140 (17%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++REC+ + + CY CG P H +R+CP G N
Sbjct: 34 GPAKCYNCGNEGHLSRECSEPMKENK------SCYKCGQPGHLSRECPTAGG-----NGQ 82
Query: 187 SGGCFKCGGYGHLARDCITRGSG--------GGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
S C+KCG GH+AR C G GG G CY+CG GH++R+C G
Sbjct: 83 STECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSREC-----VNGM 137
Query: 239 SCFNCGKPGHFARECTKVAN 258
C+NCG+ GH++R+C K +
Sbjct: 138 RCYNCGESGHYSRDCPKEST 157
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 15/127 (11%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ-GGS--NSYNNNS 187
CY C GH++REC + + N S CY CG+ H AR C + GGS SYN +
Sbjct: 61 CYKCGQPGHLSRECPT----AGGNGQSTECYKCGEMGHIARHCTKSSYGGSYGASYNGGA 116
Query: 188 G-GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
G C+ CGGYGH++R+C+ G RCYNCG+SGH +RDC GG C+ C +
Sbjct: 117 GKTCYSCGGYGHMSRECVN-------GMRCYNCGESGHYSRDCPKESTGGEKICYKCQQS 169
Query: 247 GHFAREC 253
GH C
Sbjct: 170 GHVQAAC 176
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CY+CG+ H ARDCP + C+ CG GHL+R+C CY
Sbjct: 15 GACYSCGNSGHQARDCP---------SKGPAKCYNCGNEGHLSRECSEPMKENKS---CY 62
Query: 218 NCGKSGHLARDC-GAGGAGGGGSCFNCGKPGHFARECTKVA 257
CG+ GHL+R+C AGG G C+ CG+ GH AR CTK +
Sbjct: 63 KCGQPGHLSRECPTAGGNGQSTECYKCGEMGHIARHCTKSS 103
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 21/93 (22%)
Query: 116 SRRNNGGGYGP-----GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFA 170
++ + GG YG G CY+C G GH++REC + R CYNCG+ H++
Sbjct: 100 TKSSYGGSYGASYNGGAGKTCYSCGGYGHMSRECVNGMR----------CYNCGESGHYS 149
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
RDCP++ G C+KC GH+ C
Sbjct: 150 RDCPKESTGGEKI------CYKCQQSGHVQAAC 176
>gi|223973253|gb|ACN30814.1| unknown [Zea mays]
Length = 444
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MA R G V WF+ KG+GFI P+DG DLFVHQ SIKS+G+R+L E + VEF V
Sbjct: 1 MAAAARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEG 60
Query: 61 ADGKYQALDVTAPGGA 76
DG+ +A+DVT P G+
Sbjct: 61 DDGRTKAVDVTGPDGS 76
>gi|358374535|dbj|GAA91126.1| zinc knuckle domain protein [Aspergillus kawachii IFO 4308]
Length = 228
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 69/144 (47%), Gaps = 30/144 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CYNC G+GHV +C + R N +G CYNC P H AR+CP G+ GG
Sbjct: 52 CYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGF 107
Query: 190 ---------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 108 NSGFRGGYGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAPNG 161
Query: 235 G----GGGSCFNCGKPGHFARECT 254
G G C+ C + GH +R+C
Sbjct: 162 GPLSSAGKVCYKCSQAGHISRDCP 185
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------- 236
C+ C G GH+ DC T G GRCYNC + GHLAR+C A +G
Sbjct: 52 CYNCQGLGHVQADCPTL-RLNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSG 110
Query: 237 ---------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 111 FRGGYGYPRAATCYKCGGPNHFARDCQAQA 140
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 122 GGYG-PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GGYG P CY C G H AR+C + + CY CG H +RDC GG
Sbjct: 113 GGYGYPRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGP 163
Query: 181 NSYNNNSGGCFKCGGYGHLARDC 203
S C+KC GH++RDC
Sbjct: 164 LSSAGKV--CYKCSQAGHISRDC 184
>gi|240273725|gb|EER37244.1| F-box protein [Ajellomyces capsulatus H143]
gi|325094843|gb|EGC48153.1| F-box domain-containing protein [Ajellomyces capsulatus H88]
Length = 857
Score = 87.0 bits (214), Expect = 6e-15, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 61/154 (39%), Gaps = 33/154 (21%)
Query: 125 GPGGVVCYNCDGVGHVARECTS-----------NRRNSNYNNNSGGCYNCGDPEHFARDC 173
P CY C GH++R+CTS CY CG H AR+C
Sbjct: 710 APKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNC 769
Query: 174 PR--------------QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
+ C+ CGGYGH+ARDC G +CYNC
Sbjct: 770 SQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQ-------GQKCYNC 822
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G+ GH++RDC A G C+ C +PGH C
Sbjct: 823 GEVGHVSRDCPT-EAKGERVCYKCKQPGHVQATC 855
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 60/141 (42%), Gaps = 40/141 (28%)
Query: 141 ARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG----------C 190
RECT+ + CY CG H +RDC G + N+ C
Sbjct: 704 GRECTAAPKEKT-------CYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQEC 756
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR------------------CYNCGKSGHLARDCGAG 232
+KCG GH+AR+C G G GG CY+CG GH+ARDC
Sbjct: 757 YKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQ- 815
Query: 233 GAGGGGSCFNCGKPGHFAREC 253
G C+NCG+ GH +R+C
Sbjct: 816 ----GQKCYNCGEVGHVSRDC 832
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 34/100 (34%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG--------------RCYNCGKSGHLARDCGAGGAG 235
C++CG GH++RDC + GSG G CY CG+ GH+AR+C G
Sbjct: 716 CYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGY 775
Query: 236 GGG--------------------SCFNCGKPGHFARECTK 255
G G +C++CG GH AR+CT+
Sbjct: 776 GSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQ 815
Score = 43.5 bits (101), Expect = 0.095, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Query: 122 GGYG------PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
GGYG G CYNC VGHV+R+C + + CY C P H CP
Sbjct: 804 GGYGHMARDCTQGQKCYNCGEVGHVSRDCPTEAKGERV------CYKCKQPGHVQATCP 856
>gi|242247545|ref|NP_001156314.1| RNA-binding protein lin-28-like [Acyrthosiphon pisum]
gi|239792625|dbj|BAH72634.1| ACYPI009849 [Acyrthosiphon pisum]
Length = 250
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 74/173 (42%), Gaps = 48/173 (27%)
Query: 13 WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVTA 72
WF+ KG+GF+ PDDGG D+FVHQ+ IK DG+R+L EN+ VEF E+D +A VT
Sbjct: 77 WFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCH-ESDKGLEATLVTG 135
Query: 73 PGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCY 132
P G Y KG + + + CY
Sbjct: 136 PRGQ--------------------------------YCKG-------SKKAFPQKKLRCY 156
Query: 133 NC-DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
NC D H+A +CT + C++C DP H DC + Q N
Sbjct: 157 NCGDFANHIAAKCT-------LSPQPKRCHSCKDPNHLIADCTQIQSKEPVIN 202
>gi|255716112|ref|XP_002554337.1| KLTH0F02904p [Lachancea thermotolerans]
gi|238935720|emb|CAR23900.1| KLTH0F02904p [Lachancea thermotolerans CBS 6340]
Length = 162
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 24/128 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC-----PRQQGGSNSYNN 185
CYNC GHV EC R CYNC H +RDC PR GG+
Sbjct: 51 CYNCGETGHVKSECDVQR-----------CYNCNQTGHISRDCADPKKPRFAGGAAPSRA 99
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N C++CGG H+A+DC+ S +CY CGK GH+++DC AG + +C+NC +
Sbjct: 100 NKVSCYRCGGPNHMAKDCLQSDS------KCYACGKVGHISKDCPAGSS--AKTCYNCNE 151
Query: 246 PGHFAREC 253
GH +R+C
Sbjct: 152 AGHISRDC 159
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLA DC + CYNC + GH+ DC C+NCG+ GH
Sbjct: 7 ACYVCGKIGHLAEDCESER-------LCYNCNQPGHVQSDCTMAKTVEFKQCYNCGETGH 59
Query: 249 FAREC 253
EC
Sbjct: 60 VKSEC 64
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 20/86 (23%)
Query: 121 GGGYGPG---GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
GG P V CY C G H+A++C + CY CG H ++DCP
Sbjct: 91 AGGAAPSRANKVSCYRCGGPNHMAKDCL---------QSDSKCYACGKVGHISKDCPAGS 141
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDC 203
YN N GH++RDC
Sbjct: 142 SAKTCYNCNEA--------GHISRDC 159
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G CY CGK GHLA DC + C+NC +PGH +CT
Sbjct: 2 SGSQKACYVCGKIGHLAEDCESERL-----CYNCNQPGHVQSDCT 41
>gi|149237715|ref|XP_001524734.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451331|gb|EDK45587.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 178
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 78/177 (44%), Gaps = 59/177 (33%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYN----------------NNSGGCYNCGDPEHFARDC 173
CY C VGHVA +CT R YN NS CY+CGD H +C
Sbjct: 8 TCYKCGEVGHVADDCTQEERLC-YNCHKPGHESGDCPDPKQTNSKQCYSCGDVGHIQTEC 66
Query: 174 PRQQGGSNSYNNNSGG---------------------------------CFKCGGYGHLA 200
P Q G+ YN G C+KCGG H A
Sbjct: 67 PNQAQGTKCYNCGQFGHISKNCTQESNGQTHAAPAFRKSYGRGPASGTTCYKCGGPNHFA 126
Query: 201 RDCITRGSGGGGGGRCYNCGKSGHLARDCGA-GGAGGGGS--CFNCGKPGHFARECT 254
RDC G +CY CGK+GH+++DC + GGA GS C+NCGKPGH ++ECT
Sbjct: 127 RDC------QAGNVKCYACGKAGHISKDCNSQGGAPNAGSKTCYNCGKPGHISKECT 177
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 23/117 (19%)
Query: 128 GVVCYNCDGVGHVARECTSN-----------RRNSNYNNNSGG-CYNCGDPEHFARDCPR 175
G CYNC GH+++ CT R++ SG CY CG P HFARDC
Sbjct: 72 GTKCYNCGQFGHISKNCTQESNGQTHAAPAFRKSYGRGPASGTTCYKCGGPNHFARDC-- 129
Query: 176 QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA 231
Q G+ C+ CG GH+++DC ++G G + CYNCGK GH++++C A
Sbjct: 130 -QAGNVK-------CYACGKAGHISKDCNSQGGAPNAGSKTCYNCGKPGHISKECTA 178
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH+A DC CYNC K GH + DC C++CG GH
Sbjct: 9 CYKCGEVGHVADDCTQEER------LCYNCHKPGHESGDCPDPKQTNSKQCYSCGDVGHI 62
Query: 250 ARECTKVAN 258
EC A
Sbjct: 63 QTECPNQAQ 71
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
G V CY C GH++++C N + N S CYNCG P H +++C
Sbjct: 132 GNVKCYACGKAGHISKDC--NSQGGAPNAGSKTCYNCGKPGHISKEC 176
>gi|224105199|ref|XP_002313723.1| predicted protein [Populus trichocarpa]
gi|222850131|gb|EEE87678.1| predicted protein [Populus trichocarpa]
Length = 66
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GKV WF KG+GFI PDDGG DLFVHQ SIKS+GYR+L + + VEF+++ DG+ +A
Sbjct: 1 GKVKWFSDQKGFGFITPDDGGDDLFVHQSSIKSEGYRSLGDGEEVEFEIENSDDGRTKAA 60
Query: 69 DVTAPG 74
+VTAPG
Sbjct: 61 NVTAPG 66
>gi|46111529|ref|XP_382822.1| hypothetical protein FG02646.1 [Gibberella zeae PH-1]
gi|408400341|gb|EKJ79423.1| hypothetical protein FPSE_00354 [Fusarium pseudograminearum CS3096]
Length = 236
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 33/150 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + SG CYNCG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGT--GTSGRCYNCGQPGHLARACPNPVGPGPMGRGAPMGR 110
Query: 179 ---------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
G + C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GGFPGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDC 164
Query: 230 GAGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 165 TAPNGGPLNTAGKTCYQCGEAGHISRDCPQ 194
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 67/156 (42%), Gaps = 43/156 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC----GAGGAGGG------- 237
C+ C G GH+ DC T R SG G GRCYNCG+ GHLAR C G G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPGPMGRGAPMGRGG 112
Query: 238 ----------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 FPGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA 148
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 126 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 174
Query: 186 NSGGCFKCGGYGHLARDCITR 206
C++CG GH++RDC +
Sbjct: 175 AGKTCYQCGEAGHISRDCPQK 195
>gi|319921905|gb|ADV78571.1| universal minicircle sequence-binding protein 1 [Leishmania
donovani]
Length = 115
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
V CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 2 SAVTCYKCGEAGHMSRSCPRA-------AATRSCYNCGETSHMSRDCPSERKPKSCYN-- 52
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GHL+RDC SC+NCG
Sbjct: 53 ------CGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 DHLSREC 111
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C CYNCG++ H++RDC + SC+NCG H
Sbjct: 6 CYKCGEAGHMSRSC----PRAAATRSCYNCGETSHMSRDCPS--ERKPKSCYNCGSTDHL 59
Query: 250 ARECTKVA 257
+RECT A
Sbjct: 60 SRECTNEA 67
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CYNCGSTDHLSRECTNE---AKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTDHLSRECPDR 114
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC G GH++R+C + R+ CYNCG +H +R+CP
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERK-------PKSCYNCGSTDHLSRECP 112
>gi|112982721|ref|NP_001037117.1| zinc finger protein [Bombyx mori]
gi|59858992|gb|AAX09282.1| zinc finger protein [Bombyx mori]
Length = 143
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 72/153 (47%), Gaps = 38/153 (24%)
Query: 130 VCYNCDGVGHVARECTS---NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
VCY C+ GH ARECT R+S +N C+ C HFARDC +
Sbjct: 5 VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE---------- 54
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG------------- 233
+ C++C G GH+AR+C + CYNC K+GH+AR+C GG
Sbjct: 55 ADRCYRCNGTGHIAREC----AQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNK 110
Query: 234 --------AGGGGSCFNCGKPGHFARECTKVAN 258
G +C+ CGKPGH +REC + N
Sbjct: 111 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN 143
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 186 NSGGCFKCGGYGHLARDC-----ITRGSG-GGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
+S C+KC GH AR+C ++R SG +C+ C ++GH ARDC
Sbjct: 2 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE----EADR 57
Query: 240 CFNCGKPGHFARECTK 255
C+ C GH AREC +
Sbjct: 58 CYRCNGTGHIARECAQ 73
>gi|363747942|ref|XP_003644189.1| hypothetical protein Ecym_1118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887821|gb|AET37372.1| hypothetical protein Ecym_1118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 162
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 39/170 (22%)
Query: 104 AGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSN---YNN----- 155
G G+ N DS R +CYNC+ GH+ ECT R + YN
Sbjct: 9 CGKLGHLADNCDSER-----------LCYNCNQPGHIQSECTLPRSAEHKQCYNCGETGH 57
Query: 156 -----NSGGCYNCGDPEHFARDCPRQQG-------GSNSYNNNSGGCFKCGGYGHLARDC 203
N C+NC H ++DCP + S S ++ C++CGG H+A+DC
Sbjct: 58 VRGECNIQKCFNCNQAGHISKDCPEPRRSRFSTSRASFSTKSSKVSCYRCGGPNHMAKDC 117
Query: 204 ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ + +CY+CGKSGH++RDC +G + +C+NC +PGH +R+C
Sbjct: 118 LQDET------KCYSCGKSGHISRDCPSGPS--EKTCYNCNEPGHISRDC 159
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLA +C CYNC + GH+ +C + C+NCG+ GH
Sbjct: 5 ACYVCGKLGHLADNC-------DSERLCYNCNQPGHIQSECTLPRSAEHKQCYNCGETGH 57
Query: 249 FAREC 253
EC
Sbjct: 58 VRGEC 62
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CGK GHLA +C + C+NC +PGH ECT
Sbjct: 6 CYVCGKLGHLADNCDSERL-----CYNCNQPGHIQSECT 39
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
CY+C GH++R+C S + CYNC +P H +RDCP
Sbjct: 124 CYSCGKSGHISRDCPSG-------PSEKTCYNCNEPGHISRDCP 160
>gi|301788510|ref|XP_002929671.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
Length = 206
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 25/130 (19%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+CYNC GH+A++C +R S CY CG P H ARDC RQ+
Sbjct: 101 ALCYNCGRSGHIAKDCIERKRESEQ-----CCYTCGRPGHLARDCDRQE---------EP 146
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG YGH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 147 KCYSCGEYGHIQKDC--------SQVKCYRCGETGHMAINCSKTSE---VNCYRCGESGH 195
Query: 249 FARECTKVAN 258
AREC A
Sbjct: 196 LARECPMEAT 205
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH A++C + CYNCG H A+DC ++ S
Sbjct: 82 ICYRCGESGHHAKDC---------DFLEALCYNCGRSGHIAKDCIERKRESEQ------C 126
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC + +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 127 CYTCGRPGHLARDCDRQEEP-----KCYSCGEYGHIQKDCSQV------KCYRCGETGHM 175
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 176 AINCSKTSE 184
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 151 SNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG 210
S+ N CY CG+ H A+DC + C+ CG GH+A+DCI R
Sbjct: 74 SSSTNLPDICYRCGESGHHAKDC----------DFLEALCYNCGRSGHIAKDCIERKRES 123
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CY CG+ GHLARDC C++CG+ GH ++C++V
Sbjct: 124 EQC--CYTCGRPGHLARDCDRQEEP---KCYSCGEYGHIQKDCSQV 164
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 168 HFARDCPRQQGG------------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
H+AR CPR G +S N C++CG GH A+DC
Sbjct: 49 HWARGCPRAGGSRGRGARGRGRASPSSSTNLPDICYRCGESGHHAKDC------DFLEAL 102
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCG+SGH+A+DC C+ CG+PGH AR+C +
Sbjct: 103 CYNCGRSGHIAKDCIERKRESEQCCYTCGRPGHLARDCDR 142
>gi|317137775|ref|XP_001727944.2| cellular nucleic acid-binding protein [Aspergillus oryzae RIB40]
Length = 171
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNS 182
P CY C GVGH++R+C Y+ +GG CY CG H AR+C + +
Sbjct: 47 APKEKPCYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDG 106
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
Y C+ CGG+GH+ARDC G +CYNCG+ GH++RDC + A G C+
Sbjct: 107 YGGRQHTCYSCGGHGHMARDCTH-------GQKCYNCGEVGHVSRDCPS-EARGERVCYK 158
Query: 243 CGKPGHFAREC 253
C +PGH C
Sbjct: 159 CKQPGHVQAAC 169
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 74/137 (54%), Gaps = 19/137 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + CY C H +RDCP+ G + Y+
Sbjct: 27 GTPTCYNCGGQGHVSRECTVAPKEKP-------CYRCSGVGHISRDCPQAPSG-DGYSGA 78
Query: 187 SGG--CFKCGGYGHLARDCITRGSGGGGGG----RCYNCGKSGHLARDCGAGGAGGGGSC 240
+GG C+KCG GH+AR+C G G G G CY+CG GH+ARDC G C
Sbjct: 79 TGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDCTH-----GQKC 133
Query: 241 FNCGKPGHFARECTKVA 257
+NCG+ GH +R+C A
Sbjct: 134 YNCGEVGHVSRDCPSEA 150
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 26/128 (20%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
++ GC+NCGD H ARDCP+ +G YN C++C G G
Sbjct: 2 SFQTRGRGCFNCGDASHQARDCPK-KGTPTCYNCGGQGHVSRECTVAPKEKPCYRCSGVG 60
Query: 198 HLARDCITRGSGGG-----GGGRCYNCGKSGHLARDCGAGGAGGGG------SCFNCGKP 246
H++RDC SG G GG CY CG GH+AR+C GG G G +C++CG
Sbjct: 61 HISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGH 120
Query: 247 GHFARECT 254
GH AR+CT
Sbjct: 121 GHMARDCT 128
>gi|443897220|dbj|GAC74561.1| vesicle coat complex AP-2, alpha subunit [Pseudozyma antarctica T-34]
Length = 1140
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 59/139 (42%), Gaps = 25/139 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC GH + C + R ++ CY CG H DCP G+ + C
Sbjct: 996 CFNCLEPGHESSACEAPR-----TADAKQCYGCGGKGHIRADCPTPASGA------AKAC 1044
Query: 191 FKCGGYGHLARDCITR----GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS------- 239
+ CG GH ARDC + C NCG+ H A+DC A A G
Sbjct: 1045 YTCGDQGHRARDCPQNPKPPAAAESKPVTCRNCGQPNHFAKDCKAPAAPGTAQPKPKKSK 1104
Query: 240 ---CFNCGKPGHFARECTK 255
C+ C +PGH A+EC +
Sbjct: 1105 LKSCYTCNQPGHIAKECPQ 1123
Score = 39.7 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
RC+NC + GH + C A C+ CG GH +C A+
Sbjct: 995 RCFNCLEPGHESSACEAPRTADAKQCYGCGGKGHIRADCPTPAS 1038
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 129 VVCYNCDGVGHVARECTS-----NRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
V C NC H A++C + + + CY C P H A++CP+Q
Sbjct: 1072 VTCRNCGQPNHFAKDCKAPAAPGTAQPKPKKSKLKSCYTCNQPGHIAKECPQQ 1124
>gi|310792945|gb|EFQ28406.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 229
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 31/148 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + SG CYNCG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRG 110
Query: 179 -------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 AYGGYGRGGFTGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 164
Query: 232 GGAG----GGGSCFNCGKPGHFARECTK 255
G G +C+ CG+ GH +R+C +
Sbjct: 165 PNGGPLNTAGKTCYQCGEAGHISRDCPQ 192
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 67/154 (43%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGG---AGGGG------- 238
C+ C G GH+ DC T R SG G GRCYNCG+ GHLAR C + G GG
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAY 112
Query: 239 ---------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGYGRGGFTGGPRPATCYKCGGPNHFARDCQAQA 146
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 124 PRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNT 172
Query: 186 NSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC + + G
Sbjct: 173 AGKTCYQCGEAGHISRDCPQKNTNG 197
>gi|119489207|ref|XP_001262855.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
gi|119411013|gb|EAW20958.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
Length = 237
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 66/148 (44%), Gaps = 39/148 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG------------ 237
C+ C G GH+ DC T GG GRCYNC + GHLAR+C A +G G
Sbjct: 52 CYNCQGLGHVQADCPTLRLNGGANGRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNG 111
Query: 238 ------------GSCFNCGKPGHFAREC 253
+C+ CG P HFAR+C
Sbjct: 112 GFRGGYSGYPRAATCYKCGGPNHFARDC 139
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 69/145 (47%), Gaps = 31/145 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CYNC G+GHV +C + R N N G CYNC P H AR+CP G+
Sbjct: 52 CYNCQGLGHVQADCPTLRLNGGAN---GRCYNCNQPGHLARNCPAPASGAGRGVGAPRGG 108
Query: 181 ------NSYN--NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
Y+ + C+KCGG H ARDC +CY CGK GH++RDC A
Sbjct: 109 FNGGFRGGYSGYPRAATCYKCGGPNHFARDCQAHAM------KCYACGKLGHISRDCTAP 162
Query: 233 GAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 163 NGGPLSSAGKVCYKCSQAGHISRDC 187
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 101 GGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G G G N R GY P CY C G H AR+C + ++ C
Sbjct: 97 GAGRGVGAPRGGFNGGFRGGYSGY-PRAATCYKCGGPNHFARDCQA---------HAMKC 146
Query: 161 YNCGDPEHFARDCPRQQGGSNSYNNNSGG--CFKCGGYGHLARDC 203
Y CG H +RDC GG S S G C+KC GH++RDC
Sbjct: 147 YACGKLGHISRDCTAPNGGPLS----SAGKVCYKCSQAGHISRDC 187
>gi|9955402|dbj|BAB12217.1| vasa homolog [Ciona savignyi]
Length = 770
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--NNSG 188
C+ C GH++REC + GC+ CG+ H +R+CP+ GG + + + S
Sbjct: 133 CFKCGEEGHMSRECP--KGGGGGGGGGRGCFKCGEEGHMSRECPK--GGDSGFEGRSRSK 188
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPG 247
GCFKCG GH++R+C +G GGG G C+ CG+ GH++R+C GG G G CF CG+ G
Sbjct: 189 GCFKCGEEGHMSREC-PQGGGGGRGSGCFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEG 247
Query: 248 HFARECTK 255
H +REC +
Sbjct: 248 HMSRECPR 255
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 85 NTNNNSGYNNNRGGRGGGGAGF---GGYWKGNNDSRRNNGGGYGPGGVV----------- 130
N N+ G+ + G GG G G+ K N D GGG+G
Sbjct: 46 NQPNDYGFGSGFGKSDDGGFGSKPNSGFGKSNFDDDTGFGGGFGSSSGGGFGDTRGSSRS 105
Query: 131 --CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C GH++REC + GC+ CG+ H +R+CP+ G
Sbjct: 106 KGCFKCGEEGHMSRECP----QGGGGSRGKGCFKCGEEGHMSRECPK---GGGGGGGGGR 158
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGR-----CYNCGKSGHLARDCG-AGGAGGGGSCFN 242
GCFKCG GH++R+C +G G GR C+ CG+ GH++R+C GG G G CF
Sbjct: 159 GCFKCGEEGHMSREC-PKGGDSGFEGRSRSKGCFKCGEEGHMSRECPQGGGGGRGSGCFK 217
Query: 243 CGKPGHFARECTK 255
CG+ GH +REC +
Sbjct: 218 CGEEGHMSRECPQ 230
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYN--NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C GH++REC +S + + S GC+ CG+ H +R+CP+
Sbjct: 160 CFKCGEEGHMSRECPKGG-DSGFEGRSRSKGCFKCGEEGHMSRECPQ-----GGGGGRGS 213
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
GCFKCG GH++R+C +G GGG G C+ CG+ GH++R+C +G GG
Sbjct: 214 GCFKCGEEGHMSREC-PQGGGGGRGSGCFKCGEEGHMSRECPRNTSGEGGE 263
>gi|317033248|ref|XP_001395135.2| zinc knuckle nucleic acid binding protein [Aspergillus niger CBS
513.88]
Length = 228
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 69/144 (47%), Gaps = 30/144 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CYNC G+GHV +C + R N +G CYNC P H AR+CP G+ GG
Sbjct: 52 CYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGF 107
Query: 190 ---------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C+KCGG H ARDC + +CY CGK GH++R+C A
Sbjct: 108 NSGFRGGYGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRECTAPNG 161
Query: 235 G----GGGSCFNCGKPGHFARECT 254
G G C+ C + GH +R+C
Sbjct: 162 GPLSSAGKVCYKCSQAGHISRDCP 185
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 65/150 (43%), Gaps = 38/150 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------- 236
C+ C G GH+ DC T G GRCYNC + GHLAR+C A +G
Sbjct: 52 CYNCQGLGHVQADCPTL-RLNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSG 110
Query: 237 ---------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 111 FRGGYGYPRAATCYKCGGPNHFARDCQAQA 140
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 29/123 (23%)
Query: 131 CYNCDGVGHVARECTSNRR------------NSNYN-----NNSGGCYNCGDPEHFARDC 173
CYNC GH+AR C + NS + + CY CG P HFARDC
Sbjct: 77 CYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARDC 136
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLARDCGA 231
Q + C+ CG GH++R+C G G CY C ++GH++RDC +
Sbjct: 137 QAQ----------AMKCYACGKLGHISRECTAPNGGPLSSAGKVCYKCSQAGHISRDCPS 186
Query: 232 GGA 234
A
Sbjct: 187 NEA 189
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 122 GGYG-PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GGYG P CY C G H AR+C + + CY CG H +R+C GG
Sbjct: 113 GGYGYPRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRECTAPNGGP 163
Query: 181 NSYNNNSGGCFKCGGYGHLARDCIT 205
S C+KC GH++RDC +
Sbjct: 164 LSSAGKV--CYKCSQAGHISRDCPS 186
>gi|156394304|ref|XP_001636766.1| predicted protein [Nematostella vectensis]
gi|156223872|gb|EDO44703.1| predicted protein [Nematostella vectensis]
Length = 671
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 75/167 (44%), Gaps = 40/167 (23%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ KG+GFI DDGG D+FVHQ +IK+ GYR+L E + V+ + GK A
Sbjct: 484 TGSVKWFNLIKGFGFITRDDGGEDVFVHQSAIKASGYRSLEEGEHVQLTISNSDKGKV-A 542
Query: 68 LDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPG 127
+ VT+PGG N NR +G R+
Sbjct: 543 ICVTSPGGG----------NVKGASRKNRVKKGA---------------RKYTS------ 571
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
+C+NC+ GH R C RR + C+ CG EH R CP
Sbjct: 572 --LCFNCNNSGHRVRNCPYERRTNRI------CHKCGSIEHMIRKCP 610
>gi|134079843|emb|CAK40976.1| unnamed protein product [Aspergillus niger]
Length = 214
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 69/144 (47%), Gaps = 30/144 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CYNC G+GHV +C + R N +G CYNC P H AR+CP G+ GG
Sbjct: 38 CYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGF 93
Query: 190 ---------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C+KCGG H ARDC + +CY CGK GH++R+C A
Sbjct: 94 NSGFRGGYGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRECTAPNG 147
Query: 235 G----GGGSCFNCGKPGHFARECT 254
G G C+ C + GH +R+C
Sbjct: 148 GPLSSAGKVCYKCSQAGHISRDCP 171
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 53/121 (43%), Gaps = 23/121 (19%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
CY CG+ H+A C + + + C+ C G GH+ DC T G GRCYN
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPAKQCYNCQGLGHVQADCPTL-RLNGANGRCYN 65
Query: 219 CGKSGHLARDCGAGGAGG----------------------GGSCFNCGKPGHFARECTKV 256
C + GHLAR+C A +G +C+ CG P HFAR+C
Sbjct: 66 CSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARDCQAQ 125
Query: 257 A 257
A
Sbjct: 126 A 126
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 122 GGYG-PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GGYG P CY C G H AR+C + + CY CG H +R+C GG
Sbjct: 99 GGYGYPRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRECTAPNGGP 149
Query: 181 NSYNNNSGGCFKCGGYGHLARDCIT 205
S C+KC GH++RDC +
Sbjct: 150 LSSAGKV--CYKCSQAGHISRDCPS 172
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 189 GCFKCGGYGHLARDCITRG----SGGGGGGRCYNCGKSGHLARDCGAGGAGGG-GSCFNC 243
C+KCG GH A C + + +CYNC GH+ DC G G C+NC
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPAKQCYNCQGLGHVQADCPTLRLNGANGRCYNC 66
Query: 244 GKPGHFARECTKVAN 258
+PGH AR C A+
Sbjct: 67 SQPGHLARNCPAPAS 81
>gi|401420036|ref|XP_003874507.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490743|emb|CBZ26007.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 182
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 69 SAITCYKCGEAGHMSRSCPRA-------AATRSCYNCGETGHMSRDCPSERKPKSCYN-- 119
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GH++RDC SC+NCG
Sbjct: 120 ------CGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDC--PNERKPKSCYNCGST 171
Query: 247 GHFAREC 253
H +REC
Sbjct: 172 EHLSREC 178
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
S ++ C+KCG GH++R C CYNCG++GH++RDC + SC+
Sbjct: 65 SIIMSAITCYKCGEAGHMSRSC----PRAAATRSCYNCGETGHMSRDCPS--ERKPKSCY 118
Query: 242 NCGKPGHFARECTKVAN 258
NCG H +RECT A
Sbjct: 119 NCGSTEHLSRECTNEAK 135
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 117 CYNCGSTEHLSRECTNE---AKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYN------ 167
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 168 --CGSTEHLSRECPDR 181
>gi|154345732|ref|XP_001568803.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066145|emb|CAM43935.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 276
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 77/151 (50%), Gaps = 25/151 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQ------- 177
G + C+ C GH++R+C NS + G CY CG H +RDCP Q
Sbjct: 68 GAMACFRCGEAGHMSRDCP----NSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGGRGGY 123
Query: 178 GGSNSYNNNSGG------CFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLARDC 229
G N GG C+KCG GH++RDC G G G CY CG+SGH++RDC
Sbjct: 124 GQKRGRNGAQGGYGGDRTCYKCGDAGHISRDCPNSQGGYSGAGDRTCYKCGESGHISRDC 183
Query: 230 --GAGGAGGGG--SCFNCGKPGHFARECTKV 256
GG G G +C+ CGKPGH +REC +
Sbjct: 184 PNSQGGYSGAGDRTCYKCGKPGHMSRECPEA 214
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G C NC GH AREC ++ + S C+ CG+ H +R+CP + + S +
Sbjct: 15 GTGCRNCGKEGHYARECPEA--DAKGDERSTTCFRCGEAGHMSRECPNE---AKSGAAGA 69
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGHLARDC----------------- 229
CF+CG GH++RDC G G CY CG+ GHL+RDC
Sbjct: 70 MACFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGGRGGYGQKRGR 129
Query: 230 --GAGGAGGGGSCFNCGKPGHFAREC 253
GG GG +C+ CG GH +R+C
Sbjct: 130 NGAQGGYGGDRTCYKCGDAGHISRDC 155
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
GGYG G CY C GH++R+C N + CY CG+ H +RDCP QGG +
Sbjct: 134 GGYG-GDRTCYKCGDAGHISRDCP-NSQGGYSGAGDRTCYKCGESGHISRDCPNSQGGYS 191
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGG 236
+ + C+KCG GH++R+C G GG CY CGK GH++R+C G
Sbjct: 192 GAGDRT--CYKCGKPGHMSRECPEAGGSYGGSRGGGDRTCYKCGKPGHMSRECPEAGGSY 249
Query: 237 GG-------SCFNCGKPGHFAREC 253
GG +C+ CG GH +R+C
Sbjct: 250 GGSRGGGDRTCYKCGDSGHISRDC 273
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG-GGRCYNCGKSGHLARDC--- 229
PR + G+ GC CG GH AR+C + G C+ CG++GH++R+C
Sbjct: 10 PRTESGT--------GCRNCGKEGHYARECPEADAKGDERSTTCFRCGEAGHMSRECPNE 61
Query: 230 GAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GA G +CF CG+ GH +R+C A
Sbjct: 62 AKSGAAGAMACFRCGEAGHMSRDCPNSAK 90
>gi|157876786|ref|XP_001686735.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
gi|68129810|emb|CAJ09116.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
Length = 175
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
V CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 62 SAVTCYKCGEAGHMSRSCPRA-------AATRSCYNCGETGHMSRDCPSERKPKSCYN-- 112
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GHL+RDC SC+NCG
Sbjct: 113 ------CGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDC--PNERKPKSCYNCGST 164
Query: 247 GHFAREC 253
H +REC
Sbjct: 165 DHLSREC 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
HF R P S ++ C+KCG GH++R C CYNCG++GH++R
Sbjct: 51 HFCRSRP-------SIIMSAVTCYKCGEAGHMSRSC----PRAAATRSCYNCGETGHMSR 99
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
DC + SC+NCG H +RECT A
Sbjct: 100 DCPS--ERKPKSCYNCGSTDHLSRECTNEAK 128
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 110 CYNCGSTDHLSRECTNE---AKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYN------ 160
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 161 --CGSTDHLSRECPDR 174
>gi|319921907|gb|ADV78572.1| universal minicircle sequence-binding protein 2 [Leishmania
donovani]
Length = 175
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 62 SAITCYKCGEAGHMSRSCPRA-------AATRSCYNCGETGHMSRDCPSERKPKSCYN-- 112
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GHL+RDC SC+NCG
Sbjct: 113 ------CGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDC--PNERKPKSCYNCGST 164
Query: 247 GHFAREC 253
H +REC
Sbjct: 165 DHLSREC 171
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C CYNCG++GH++RDC + SC+NCG H
Sbjct: 66 CYKCGEAGHMSRSC----PRAAATRSCYNCGETGHMSRDCPS--ERKPKSCYNCGSTDHL 119
Query: 250 ARECTKVAN 258
+RECT A
Sbjct: 120 SRECTNEAK 128
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 110 CYNCGSTDHLSRECTNE---AKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYN------ 160
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 161 --CGSTDHLSRECPDR 174
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC G GH++R+C + R+ CYNCG +H +R+CP
Sbjct: 124 TNEAKAGADTRSCYNCGGTGHLSRDCPNERK-------PKSCYNCGSTDHLSRECP 172
>gi|259485495|tpe|CBF82565.1| TPA: zinc knuckle nucleic acid binding protein, putative
(AFU_orthologue; AFUA_7G02190) [Aspergillus nidulans
FGSC A4]
Length = 233
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 32/145 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CYNC G+GHV +C + R N +G CYNC P H AR+CP G+
Sbjct: 52 CYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGG 107
Query: 181 --------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 108 FGGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAP 161
Query: 233 GAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 162 NGGPLSSAGKVCYKCSQAGHISRDC 186
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 65/152 (42%), Gaps = 40/152 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------- 236
C+ C G GH+ DC T G GRCYNC + GHLAR+C A +G
Sbjct: 52 CYNCQGLGHVQADCPTL-RLNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGG 110
Query: 237 -----------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 111 GFRGGYGGYPRAATCYKCGGPNHFARDCQAQA 142
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S
Sbjct: 120 PRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLS--- 167
Query: 186 NSGG--CFKCGGYGHLARDC 203
S G C+KC GH++RDC
Sbjct: 168 -SAGKVCYKCSQAGHISRDC 186
>gi|317155980|ref|XP_003190667.1| zinc knuckle nucleic acid binding protein [Aspergillus oryzae
RIB40]
Length = 237
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 32/145 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CYNC G+GHV +C + R N +G CYNC P H AR+CP G+
Sbjct: 52 CYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGG 107
Query: 181 --------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 108 YNGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAP 161
Query: 233 GAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 162 NGGPLSSAGKVCYKCAQAGHISRDC 186
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 66/152 (43%), Gaps = 40/152 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG------------ 237
C+ C G GH+ DC T G GRCYNC + GHLAR+C A +G G
Sbjct: 52 CYNCQGLGHVQADCPTL-RLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGYNG 110
Query: 238 ------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 111 GFRGGYGGYPRAATCYKCGGPNHFARDCQAQA 142
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S
Sbjct: 120 PRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSAG 170
Query: 186 NSGGCFKCGGYGHLARDC 203
C+KC GH++RDC
Sbjct: 171 KV--CYKCAQAGHISRDC 186
>gi|238498920|ref|XP_002380695.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
flavus NRRL3357]
gi|220693969|gb|EED50314.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
flavus NRRL3357]
Length = 238
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 68/145 (46%), Gaps = 32/145 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS---------- 180
CYNC G+GHV +C + R N +G CYNC P H AR+CP G+
Sbjct: 52 CYNCQGLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGG 107
Query: 181 --------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 108 YNGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAP 161
Query: 233 GAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 162 NGGPLSSAGKVCYKCAQAGHISRDC 186
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 66/152 (43%), Gaps = 40/152 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG------------ 237
C+ C G GH+ DC T G GRCYNC + GHLAR+C A +G G
Sbjct: 52 CYNCQGLGHVQADCPTL-RLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGYNG 110
Query: 238 ------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 111 GFRGGYGGYPRAATCYKCGGPNHFARDCQAQA 142
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S
Sbjct: 120 PRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSAG 170
Query: 186 NSGGCFKCGGYGHLARDC 203
C+KC GH++RDC
Sbjct: 171 KV--CYKCAQAGHISRDC 186
>gi|365988276|ref|XP_003670969.1| hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421]
gi|343769740|emb|CCD25726.1| hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421]
Length = 158
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 65/127 (51%), Gaps = 23/127 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----NN 186
CYNC GHV ECT R CYNC H ++DCP + NS N N+
Sbjct: 49 CYNCGETGHVRSECTVQR-----------CYNCNQTGHISKDCPEPKKPYNSNNRRGGNS 97
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+KCGG H+A+DC +CYNCG +GHL+RDC G +C+ C +
Sbjct: 98 RVSCYKCGGPNHMAKDCTE------SDPKCYNCGNTGHLSRDCPEGPR--EKTCYKCNET 149
Query: 247 GHFAREC 253
GH +R+C
Sbjct: 150 GHISRDC 156
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 34/136 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH+A +C S + CYNC P H +CP+ + +
Sbjct: 5 ACYVCGKIGHLAEDCDSEKL----------CYNCNQPGHVQSECPQPRTVEHK------Q 48
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG----------GAGGGGS 239
C+ CG GH+ +C + RCYNC ++GH+++DC G S
Sbjct: 49 CYNCGETGHVRSECTVQ--------RCYNCNQTGHISKDCPEPKKPYNSNNRRGGNSRVS 100
Query: 240 CFNCGKPGHFARECTK 255
C+ CG P H A++CT+
Sbjct: 101 CYKCGGPNHMAKDCTE 116
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 17/75 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CY C G H+A++CT + CYNCG+ H +RDCP
Sbjct: 99 VSCYKCGGPNHMAKDCTE---------SDPKCYNCGNTGHLSRDCPE--------GPREK 141
Query: 189 GCFKCGGYGHLARDC 203
C+KC GH++RDC
Sbjct: 142 TCYKCNETGHISRDC 156
>gi|315043931|ref|XP_003171341.1| DNA-binding protein HEXBP [Arthroderma gypseum CBS 118893]
gi|311343684|gb|EFR02887.1| DNA-binding protein HEXBP [Arthroderma gypseum CBS 118893]
Length = 208
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 36/151 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP------------RQQG 178
CY+C G+GHV +C + R N +N CYNC P H AR+CP R G
Sbjct: 21 CYHCQGLGHVQADCPTLRLNGGASN--ARCYNCNMPGHLARNCPSGGMQQQNPQPVRNTG 78
Query: 179 GSNSYNNNSG------------GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLA 226
+ NN+G C+KCGG H ARDC + +CY CGK GH++
Sbjct: 79 PARGAFNNAGFRGGSAGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHIS 132
Query: 227 RDCGAGGAGG----GGSCFNCGKPGHFAREC 253
RDC A G G C+ C + GH +R+C
Sbjct: 133 RDCTAPNGGPLSSVGKVCYKCSQAGHISRDC 163
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 65/149 (43%), Gaps = 40/149 (26%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTS---NRRNSNYNNNSGG----- 159
G+ + + + R NGG CYNC+ GH+AR C S ++N N+G
Sbjct: 28 GHVQADCPTLRLNGGA---SNARCYNCNMPGHLARNCPSGGMQQQNPQPVRNTGPARGAF 84
Query: 160 -----------------CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARD 202
CY CG P HFARDC Q + C+ CG GH++RD
Sbjct: 85 NNAGFRGGSAGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRD 134
Query: 203 CITR--GSGGGGGGRCYNCGKSGHLARDC 229
C G G CY C ++GH++RDC
Sbjct: 135 CTAPNGGPLSSVGKVCYKCSQAGHISRDC 163
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 37/121 (30%)
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLA 226
H + CPR + + C+ C G GH+ DC T R +GG RCYNC GHLA
Sbjct: 5 HESNGCPRPR------TTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYNCNMPGHLA 58
Query: 227 RDCGAGGA------------------------GG------GGSCFNCGKPGHFARECTKV 256
R+C +GG GG +C+ CG P HFAR+C
Sbjct: 59 RNCPSGGMQQQNPQPVRNTGPARGAFNNAGFRGGSAGYPRAATCYKCGGPNHFARDCQAQ 118
Query: 257 A 257
A
Sbjct: 119 A 119
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 48/128 (37%), Gaps = 25/128 (19%)
Query: 92 YNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG--------------PGGVVCYNCDGV 137
YN N G GG + N RN G G P CY C G
Sbjct: 49 YNCNMPGHLARNCPSGGMQQQNPQPVRNTGPARGAFNNAGFRGGSAGYPRAATCYKCGGP 108
Query: 138 GHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYG 197
H AR+C + + CY CG H +RDC GG S C+KC G
Sbjct: 109 NHFARDCQAQ---------AMKCYACGKLGHISRDCTAPNGGPLSSVGKV--CYKCSQAG 157
Query: 198 HLARDCIT 205
H++RDC T
Sbjct: 158 HISRDCPT 165
>gi|354488556|ref|XP_003506434.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 170
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++CT +R CY C P H ARDC RQ+
Sbjct: 66 TCYNCGKRGHIAKDCTQTKRE-----REQCCYICSRPGHLARDCDRQE---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C SC+ CG+PGH
Sbjct: 112 CYTCGEFGHIQKDCTQ--------IKCYRCGENGHMAVNCSKASEV---SCYRCGEPGHL 160
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 161 ARECPIEAT 169
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 156 NSGGCYNCGDPEHFARDCP-----------RQQGGSNSYNNNSGGCFKCGGYGHLARDCI 204
+S C+ CG P H+AR+CP R +G S + S C++CG GH A+DC
Sbjct: 2 SSKTCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCGK GH+A+DC C+ C +PGH AR+C +
Sbjct: 62 LLQDT------CYNCGKRGHIAKDCTQTKREREQCCYICSRPGHLARDCDR 106
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 68/166 (40%), Gaps = 37/166 (22%)
Query: 104 AGFGGYW-----KGNNDSRRNNGGGYGPGGV------VCYNCDGVGHVARECTSNRRNSN 152
G G+W KG R G GP +CY C GH A++C
Sbjct: 9 CGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDC-------- 60
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
+ CYNCG H A+DC + + C+ C GHLARDC +
Sbjct: 61 -DLLQDTCYNCGKRGHIAKDC------TQTKREREQCCYICSRPGHLARDCDRQEEQ--- 110
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CY CG+ GH+ +DC C+ CG+ GH A C+K +
Sbjct: 111 --KCYTCGEFGHIQKDCTQI------KCYRCGENGHMAVNCSKASE 148
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 27/139 (19%)
Query: 130 VCYNCDGVGHVAREC--------TSNRR----NSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
C+ C GH AREC T R + + S CY CG+ H+A+DC Q
Sbjct: 5 TCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCDLLQ 64
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
C+ CG GH+A+DC + CY C + GHLARDC
Sbjct: 65 DT----------CYNCGKRGHIAKDCTQ--TKREREQCCYICSRPGHLARDCDRQEEQ-- 110
Query: 238 GSCFNCGKPGHFARECTKV 256
C+ CG+ GH ++CT++
Sbjct: 111 -KCYTCGEFGHIQKDCTQI 128
>gi|389608533|dbj|BAM17876.1| similar to CG3800 [Papilio xuthus]
Length = 144
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 67/128 (52%), Gaps = 18/128 (14%)
Query: 130 VCYNCDGVGHVARECTS---NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
VCY C+ GH ARECT R++ +N C+ C HFARDC +
Sbjct: 5 VCYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKEE---------- 54
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-SCFNCGK 245
+ C++C G GH+AR+C + CYNC K+GH+AR+C GG G +C+ C K
Sbjct: 55 ADRCYRCNGTGHIAREC----AQSPDEPSCYNCNKTGHIARNCPEGGRDSSGQTCYTCNK 110
Query: 246 PGHFAREC 253
GH +R C
Sbjct: 111 AGHISRNC 118
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGG------RCYNCGKSGHLARDCGAGGAGGGGS 239
+S C+KC GH AR+C G G +C+ C ++GH ARDC
Sbjct: 2 SSSVCYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKE----EADR 57
Query: 240 CFNCGKPGHFARECTK 255
C+ C GH AREC +
Sbjct: 58 CYRCNGTGHIARECAQ 73
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS--------CFNCGKPGHFARECTKVAN 258
CY C ++GH AR+C GG + CF C + GHFAR+C + A+
Sbjct: 6 CYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKEEAD 56
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
GG G CY C+ GH++R C + + CY CG P H +RDC
Sbjct: 96 GGRDSSGQTCYTCNKAGHISRNCP---------DGTKTCYVCGKPGHISRDC 138
>gi|91086229|ref|XP_972436.1| PREDICTED: similar to zinc finger protein [Tribolium castaneum]
Length = 146
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 127 GGVVCYNCDGVGHVARECTS----NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
G +CY C+ GH AREC+ +N + C+ C H+ARDC
Sbjct: 3 SGSICYKCNQPGHFARECSQPGGREGGRGGFNRSREKCHKCNKTGHYARDC--------- 53
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+S C++C G GH A+DC+ CYNC K GH+AR C GG +C N
Sbjct: 54 -KEDSARCYRCYGEGHFAKDCLQSPDMPS----CYNCRKPGHIARSCPEGGGVANETCHN 108
Query: 243 CGKPGHFARECTK 255
C +PGH +R C +
Sbjct: 109 CQRPGHISRNCPE 121
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 23/125 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AR+C +S CY C HFA+DC + + YN
Sbjct: 40 CHKCNKTGHYARDC---------KEDSARCYRCYGEGHFAKDCLQSPDMPSCYN------ 84
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
C GH+AR C GG C+NC + GH++R+C C+ C KPGH
Sbjct: 85 --CRKPGHIARSCPE--GGGVANETCHNCQRPGHISRNCPENTK----ICYLCHKPGHLK 136
Query: 251 RECTK 255
R+C +
Sbjct: 137 RDCQE 141
>gi|121709158|ref|XP_001272326.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
gi|119400475|gb|EAW10900.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
Length = 236
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 66/152 (43%), Gaps = 39/152 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESSSCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG------------ 237
C+ C G GH+ DC T GG GRCYNC + GHLAR+C A G G
Sbjct: 52 CYNCQGLGHVQADCPTLRLNGGANGRCYNCNQPGHLARNCPAPATGAGRGVGAPRGGFNS 111
Query: 238 ------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 112 GFRGGYGGYPRAATCYKCGGPNHFARDCQAHA 143
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 72/145 (49%), Gaps = 31/145 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-----------QGG 179
CYNC G+GHV +C + R N N G CYNC P H AR+CP +GG
Sbjct: 52 CYNCQGLGHVQADCPTLRLNGGAN---GRCYNCNQPGHLARNCPAPATGAGRGVGAPRGG 108
Query: 180 SNS-YNNNSGG------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
NS + GG C+KCGG H ARDC +CY CGK GH++RDC A
Sbjct: 109 FNSGFRGGYGGYPRAATCYKCGGPNHFARDCQAHAM------KCYACGKLGHISRDCTAP 162
Query: 233 GAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 163 NGGPLSSAGKVCYKCSQAGHISRDC 187
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 101 GGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G G G N R GGY P CY C G H AR+C ++ C
Sbjct: 97 GAGRGVGAPRGGFNSGFRGGYGGY-PRAATCYKCGGPNHFARDCQAHAMK---------C 146
Query: 161 YNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT 205
Y CG H +RDC GG S C+KC GH++RDC T
Sbjct: 147 YACGKLGHISRDCTAPNGGPLSSAGKV--CYKCSQAGHISRDCPT 189
>gi|433935|emb|CAA53777.1| UMS binding protein [Crithidia fasciculata]
Length = 116
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
V CY C GH++REC S CYNCG H +R+CP ++
Sbjct: 3 AAVTCYKCGEAGHMSRECPKA-------AASRTCYNCGQTGHLSRECPSER--------K 47
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+ CG HL+R+C G CYNCG++GHL+R+C + C+NCG
Sbjct: 48 PKACYNCGSTEHLSRECPNEAKTGADSRTCYNCGQTGHLSRECPS--ERKPKRCYNCGST 105
Query: 247 GHFAREC 253
H +REC
Sbjct: 106 EHLSREC 112
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R+C CYNCG++GHL+R+C + +C+NCG H
Sbjct: 7 CYKCGEAGHMSREC----PKAAASRTCYNCGQTGHLSRECPS--ERKPKACYNCGSTEHL 60
Query: 250 ARECTKVAN 258
+REC A
Sbjct: 61 SRECPNEAK 69
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 25/95 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-QGGSNS---YNN 185
CYNC GH++REC S R+ CYNCG EH +R+CP + + G++S YN
Sbjct: 28 TCYNCGQTGHLSRECPSERK-------PKACYNCGSTEHLSRECPNEAKTGADSRTCYNC 80
Query: 186 NSGG--------------CFKCGGYGHLARDCITR 206
G C+ CG HL+R+C R
Sbjct: 81 GQTGHLSRECPSERKPKRCYNCGSTEHLSRECPDR 115
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC GH++REC S R+ CYNCG EH +R+CP
Sbjct: 66 NEAKTGADSRTCYNCGQTGHLSRECPSERKPKR-------CYNCGSTEHLSRECP 113
>gi|1841864|gb|AAB47542.1| nucleic acid binding protein [Trypanosoma equiperdum]
Length = 270
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHF 169
+ D N G GG CYNC GH +REC + R G CYNC P HF
Sbjct: 55 SRDCPSNRGTAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCVQPGHF 114
Query: 170 ARDCP--RQQGGSNSYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGRCYNCGKSGHLA 226
+R+CP R + C+ CG GH +R+C RG+ GGG CY C + GH+A
Sbjct: 115 SRECPNMRGGPMGGAPMGGGRACYHCGQPGHFSRECPNMRGANMGGGRECYQCRQEGHIA 174
Query: 227 RDCG---------AGGAGGGGSCFNCGKPGHFAREC 253
+C AGGG +C+ CG+PGH +R C
Sbjct: 175 SECPNAPDDAAAGGTAAGGGRACYKCGQPGHLSRAC 210
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 19/144 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH AREC + + + CY CG P+H +RDCP +G +
Sbjct: 15 GGNNCHRCGQPGHFARECPNVPPGAMGDR---ACYTCGQPDHLSRDCPSNRGTAPM--GG 69
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDCG--------AG 232
C+ CG GH +R+C G GG CYNC + GH +R+C
Sbjct: 70 GRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCVQPGHFSRECPNMRGGPMGGA 129
Query: 233 GAGGGGSCFNCGKPGHFARECTKV 256
GGG +C++CG+PGHF+REC +
Sbjct: 130 PMGGGRACYHCGQPGHFSRECPNM 153
>gi|291244816|ref|XP_002742290.1| PREDICTED: Vasa-like, partial [Saccoglossus kowalevskii]
Length = 679
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 14/129 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++REC GC+ CG+ H +R+CP+ GG GC
Sbjct: 126 CFKCGEEGHMSRECPKGG-----GGGGRGCFKCGEDGHMSRECPQGGGGGGR----GRGC 176
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS-----CFNCGK 245
FKCG GH++RDC + G G GG C+ CG+SGH +R+C +GGGG CF CG+
Sbjct: 177 FKCGEEGHMSRDCTSGGLGKSSGGGCFKCGESGHFSRECPNAESGGGGGGGGGNCFRCGE 236
Query: 246 PGHFARECT 254
GHFA++CT
Sbjct: 237 SGHFAKDCT 245
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSG-GCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C+ CG+ H +R+CP+ GG + CFKCG GH++R+C GGGGG C+
Sbjct: 72 CFKCGEEGHMSRECPKGGGGGGGGSGGGDRSCFKCGEEGHMSREC---PKGGGGGRNCFK 128
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CG+ GH++R+C GG GGG CF CG+ GH +REC +
Sbjct: 129 CGEEGHMSRECPKGGGGGGRGCFKCGEDGHMSRECPQ 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++R+CTS ++ GGC+ CG+ HF+R+CP + G G C
Sbjct: 176 CFKCGEEGHMSRDCTSG---GLGKSSGGGCFKCGESGHFSRECPNAESGGGG-GGGGGNC 231
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCY 217
F+CG GH A+DC + G Y
Sbjct: 232 FRCGESGHFAKDCTNEDTREGAAPVTY 258
>gi|260943696|ref|XP_002616146.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
gi|238849795|gb|EEQ39259.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
Length = 171
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 21/135 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN------ 184
CY C +GH+ +C ++ + S CYNC + H +R+CP+ +G + +
Sbjct: 50 CYLCGDIGHIRGDCPNSAQGSK-------CYNCSEFGHISRECPKNEGAAPAAPAHKKSG 102
Query: 185 --NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
S C+KCGG H A+DC G +CY+CGKSGH++++C SC+N
Sbjct: 103 KFTKSPTCYKCGGPNHFAKDC------QAGSVKCYSCGKSGHISKECTLASDKVTKSCYN 156
Query: 243 CGKPGHFARECTKVA 257
CG+ GH A++C VA
Sbjct: 157 CGQTGHIAKDCVPVA 171
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 128 GVVCYNCDGVGHVARECTSNR---------RNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
G CYNC GH++REC N + S S CY CG P HFA+DC Q
Sbjct: 69 GSKCYNCSEFGHISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGGPNHFAKDC---QA 125
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
GS C+ CG GH++++C + CYNCG++GH+A+DC
Sbjct: 126 GSVK-------CYSCGKSGHISKECTL--ASDKVTKSCYNCGQTGHIAKDC 167
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 32/122 (26%)
Query: 160 CYNCGDPEHFARDCPRQ--------QGGSNS------YNNNSGGCFKCGGYGHLARDCIT 205
CY CG+ H A +C +Q Q G S S C+ CG GH+ DC
Sbjct: 6 CYKCGESGHIADNCQQQERLCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHIRGDC-- 63
Query: 206 RGSGGGGGGRCYNCGKSGHLARDC--------------GAGGAGGGGSCFNCGKPGHFAR 251
G +CYNC + GH++R+C +G +C+ CG P HFA+
Sbjct: 64 --PNSAQGSKCYNCSEFGHISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGGPNHFAK 121
Query: 252 EC 253
+C
Sbjct: 122 DC 123
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
G V CY+C GH+++ECT + + CYNCG H A+DC
Sbjct: 126 GSVKCYSCGKSGHISKECTLAS-----DKVTKSCYNCGQTGHIAKDC 167
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH+A +C + CYNC ++GH + C C+ CG GH
Sbjct: 6 CYKCGESGHIADNCQQQER------LCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHI 59
Query: 250 ARECTKVAN 258
+C A
Sbjct: 60 RGDCPNSAQ 68
>gi|241780604|ref|XP_002400201.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
gi|215510686|gb|EEC20139.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
Length = 181
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-----------CYNCGDPEHFARD 172
+GP + CYNC +GH+AREC + + G CY CG H +RD
Sbjct: 46 HGPDEMSCYNCGKMGHIARECKEQEKTCYICHKQGHISRDCEQDERRCYLCGKLGHISRD 105
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
CP S + C+ CG GH++RDC G CY C + GH+AR+C +
Sbjct: 106 CP-------SSERDDRKCYNCGHLGHISRDCPEAGGNDTVADVCYRCNERGHIARNCRS- 157
Query: 233 GAGGGGSCFNCGKPGHFARECTKVA 257
C++CG+ GH AREC A
Sbjct: 158 -TRTNNRCYHCGEVGHLARECEMKA 181
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------S 180
CY C+G GH++++C + + CYNCG H AR+C Q+ S
Sbjct: 31 CYRCNGTGHISKDC-------QHGPDEMSCYNCGKMGHIARECKEQEKTCYICHKQGHIS 83
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG--GG 238
+ C+ CG GH++RDC S +CYNCG GH++RDC G
Sbjct: 84 RDCEQDERRCYLCGKLGHISRDC---PSSERDDRKCYNCGHLGHISRDCPEAGGNDTVAD 140
Query: 239 SCFNCGKPGHFAREC 253
C+ C + GH AR C
Sbjct: 141 VCYRCNERGHIARNC 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KC GH ARDC RCY C +GH+++DC G SC+NCGK GH
Sbjct: 11 CYKCNRIGHFARDC------KEAEDRCYRCNGTGHISKDCQHG--PDEMSCYNCGKMGHI 62
Query: 250 ARECTK 255
AREC +
Sbjct: 63 ARECKE 68
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
GG VCY C+ GH+AR C S R N+ CY+CG+ H AR+C
Sbjct: 131 EAGGNDTVADVCYRCNERGHIARNCRSTRTNNR-------CYHCGEVGHLAREC 177
>gi|389610781|dbj|BAM19001.1| simila to CG3800 [Papilio polytes]
Length = 145
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 19/129 (14%)
Query: 130 VCYNCDGVGHVARECTS----NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
VCY C+ GH ARECT R++ +N C+ C HFARDC +
Sbjct: 5 VCYKCNRTGHFARECTQGGGVASRDTGFNRQREKCFKCNRTGHFARDCKEE--------- 55
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-SCFNCG 244
+ C++C G GH+AR+C + CYNC K+GH+AR+C GG G +C+ C
Sbjct: 56 -ADRCYRCNGTGHIAREC----AQSPDEPSCYNCNKTGHIARNCPEGGRDSSGQTCYTCN 110
Query: 245 KPGHFAREC 253
K GH +R C
Sbjct: 111 KAGHISRNC 119
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR----------CYNCGKSGHLARDCGAGGAG 235
+S C+KC GH AR+C GGG R C+ C ++GH ARDC
Sbjct: 2 SSSVCYKCNRTGHFARECT---QGGGVASRDTGFNRQREKCFKCNRTGHFARDCKE---- 54
Query: 236 GGGSCFNCGKPGHFARECTK 255
C+ C GH AREC +
Sbjct: 55 EADRCYRCNGTGHIARECAQ 74
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query: 216 CYNCGKSGHLARDCGAGGAGGG---------GSCFNCGKPGHFARECTKVAN 258
CY C ++GH AR+C GG CF C + GHFAR+C + A+
Sbjct: 6 CYKCNRTGHFARECTQGGGVASRDTGFNRQREKCFKCNRTGHFARDCKEEAD 57
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
GG G CY C+ GH++R C + + CY CG P H +RDC
Sbjct: 97 GGRDSSGQTCYTCNKAGHISRNCP---------DGTKTCYVCGKPGHISRDC 139
>gi|157876783|ref|XP_001686734.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129809|emb|CAJ09115.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 115
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
V CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 2 SAVTCYKCGEAGHMSRSCPRA-------AATRSCYNCGETGHMSRDCPSERKPKSCYN-- 52
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GHL+RDC SC+NCG
Sbjct: 53 ------CGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 DHLSREC 111
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C CYNCG++GH++RDC + SC+NCG H
Sbjct: 6 CYKCGEAGHMSRSC----PRAAATRSCYNCGETGHMSRDCPS--ERKPKSCYNCGSTDHL 59
Query: 250 ARECTKVA 257
+RECT A
Sbjct: 60 SRECTNEA 67
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CYNCGSTDHLSRECTNE---AKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTDHLSRECPDR 114
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC G GH++R+C + R+ CYNCG +H +R+CP
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERK-------PKSCYNCGSTDHLSRECP 112
>gi|440470333|gb|ELQ39408.1| zinc finger protein GIS2 [Magnaporthe oryzae Y34]
Length = 230
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 33/153 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + +N G CY+CG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGSN--GRCYSCGQPGHLARACPNPNGANMGRGAPVPRG 110
Query: 180 ----------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GYDGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDC 164
Query: 230 GAGGAGG----GGSCFNCGKPGHFARECTKVAN 258
A G G +C+ CG+ GH +R+C A
Sbjct: 165 TAPNGGPLNTVGKTCYQCGEAGHISRQCPTKAT 197
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 66/156 (42%), Gaps = 43/156 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGG---------- 237
C+ C G GH+ DC T R SG G GRCY+CG+ GHLAR C GA G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGY 112
Query: 238 ----------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 DGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQA 148
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 54/142 (38%), Gaps = 36/142 (25%)
Query: 131 CYNCDGVGHVARECT----------------------SNRRNSNYNNNSGGCYNCGDPEH 168
CY+C GH+AR C R CY CG P H
Sbjct: 80 CYSCGQPGHLARACPNPNGANMGRGAPVPRGGYDGGYGGRGGFAGGARPATCYKCGGPNH 139
Query: 169 FARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLA 226
FARDC Q + C+ CG GH++RDC G G CY CG++GH++
Sbjct: 140 FARDCQAQ----------AMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHIS 189
Query: 227 RDCGAGGAGGGGSCFNCGKPGH 248
R C G S N P H
Sbjct: 190 RQCPTKATANGDS--NAAAPAH 209
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 129 ATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNTVGK 177
Query: 189 GCFKCGGYGHLARDCITRGSGGG 211
C++CG GH++R C T+ + G
Sbjct: 178 TCYQCGEAGHISRQCPTKATANG 200
>gi|389626373|ref|XP_003710840.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|351650369|gb|EHA58228.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|440480347|gb|ELQ61019.1| zinc finger protein GIS2 [Magnaporthe oryzae P131]
Length = 230
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 33/153 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + +N G CY+CG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGSN--GRCYSCGQPGHLARACPNPNGANMGRGAPVPRG 110
Query: 180 ----------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GYGGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDC 164
Query: 230 GAGGAGG----GGSCFNCGKPGHFARECTKVAN 258
A G G +C+ CG+ GH +R+C A
Sbjct: 165 TAPNGGPLNTVGKTCYQCGEAGHISRQCPTKAT 197
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 66/156 (42%), Gaps = 43/156 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGG---------- 237
C+ C G GH+ DC T R SG G GRCY+CG+ GHLAR C GA G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGY 112
Query: 238 ----------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQA 148
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 54/142 (38%), Gaps = 36/142 (25%)
Query: 131 CYNCDGVGHVARECT----------------------SNRRNSNYNNNSGGCYNCGDPEH 168
CY+C GH+AR C R CY CG P H
Sbjct: 80 CYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGARPATCYKCGGPNH 139
Query: 169 FARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLA 226
FARDC Q + C+ CG GH++RDC G G CY CG++GH++
Sbjct: 140 FARDCQAQ----------AMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHIS 189
Query: 227 RDCGAGGAGGGGSCFNCGKPGH 248
R C G S N P H
Sbjct: 190 RQCPTKATANGDS--NAAAPAH 209
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 53/137 (38%), Gaps = 20/137 (14%)
Query: 75 GAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNC 134
G P H ++ N +G N RG G GGY + CY C
Sbjct: 84 GQPGHLAR--ACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGARPA-------TCYKC 134
Query: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCG 194
G H AR+C + CY CG H +RDC GG N C++CG
Sbjct: 135 GGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNTVGKTCYQCG 183
Query: 195 GYGHLARDCITRGSGGG 211
GH++R C T+ + G
Sbjct: 184 EAGHISRQCPTKATANG 200
>gi|366999588|ref|XP_003684530.1| hypothetical protein TPHA_0B04270 [Tetrapisispora phaffii CBS 4417]
gi|357522826|emb|CCE62096.1| hypothetical protein TPHA_0B04270 [Tetrapisispora phaffii CBS 4417]
Length = 165
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 25/131 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYN---- 184
CYNC GHV EC+ R C+NC H ++DC PR+Q +N +
Sbjct: 49 CYNCGETGHVRSECSVQR-----------CFNCNQTGHISKDCSEPRKQKFNNGMSAQRF 97
Query: 185 --NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
NN C+KCGG H+A+DC+ +CY+CG GHL++DC +G C+N
Sbjct: 98 SRNNKVSCYKCGGPNHMAKDCLQED------FKCYSCGGVGHLSKDCPSGSGVNAKVCYN 151
Query: 243 CGKPGHFAREC 253
C + GH +REC
Sbjct: 152 CNQTGHISREC 162
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLA DC CYNC ++GHL +C + C+NCG+ GH
Sbjct: 5 ACYVCGKLGHLAEDC-------DSDRLCYNCNQAGHLQSECTLPRSVEHKQCYNCGETGH 57
Query: 249 FARECT 254
EC+
Sbjct: 58 VRSECS 63
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
CY CG H A DC ++ C+ C GHL +C S +CYN
Sbjct: 5 ACYVCGKLGHLAEDC-----------DSDRLCYNCNQAGHLQSECTLPRSVEHK--QCYN 51
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CG++GH+ +C CFNC + GH +++C++
Sbjct: 52 CGETGHVRSECSVQ------RCFNCNQTGHISKDCSE 82
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CY C G H+A++C CY+CG H ++DCP G N+
Sbjct: 103 VSCYKCGGPNHMAKDCL---------QEDFKCYSCGGVGHLSKDCPSGSGV------NAK 147
Query: 189 GCFKCGGYGHLARDC 203
C+ C GH++R+C
Sbjct: 148 VCYNCNQTGHISREC 162
>gi|91179150|gb|ABE27759.1| vasa [Azumapecten farreri]
Length = 801
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH AREC + G C+ CG+ HFAR+CP C
Sbjct: 170 CHKCGEDGHFARECPTGG-GGRGGGGGGKCHKCGEEGHFARECP----TGGGGGGGDRSC 224
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGS----CFNCGK 245
FKCG GH++R+C G GGGGG R C+ CG+ GH++R+C + G GGGG CF CG+
Sbjct: 225 FKCGEQGHMSRECPKGGGGGGGGDRSCFKCGEQGHMSRECPSSGGGGGGGGDRGCFKCGE 284
Query: 246 PGHFAREC 253
GHF+REC
Sbjct: 285 QGHFSREC 292
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
C+ C GH++REC S+ + G C+ CG+ HF+R+CP
Sbjct: 251 CFKCGEQGHMSRECPSSGGGGGGGGDRG-CFKCGEQGHFSRECP 293
>gi|123325507|gb|ABM74410.1| vasa protein [Botrylloides violaceus]
Length = 630
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
+ S GC+ CG+ H +RDCP + S GCFKCG GH++RDC + G GG
Sbjct: 38 SRSKGCFKCGEEGHMSRDCP----SGGGGGSRSKGCFKCGEEGHMSRDCPSGGGGGSRSK 93
Query: 215 RCYNCGKSGHLARDC-----------GAGGAGGGGSCFNCGKPGHFARECTK 255
C+ CG+ GH++RDC GAG +C+ CG+ GHF+REC K
Sbjct: 94 GCFKCGEEGHISRDCPNGQKSDFSRNGAGDCARSTACYKCGEEGHFSRECPK 145
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 88 NNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRN-NGGGYGPGGVVCYNCDGVGHVARECTS 146
NSG+++ G G A G + +S RN NG G G C+ C GH++R+C S
Sbjct: 3 ENSGWDDEDFG-GVTSAPVSGVF---TESLRNGNGDGGGSRSKGCFKCGEEGHMSRDCPS 58
Query: 147 NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC--- 203
+ S GC+ CG+ H +RDCP + S GCFKCG GH++RDC
Sbjct: 59 G---GGGGSRSKGCFKCGEEGHMSRDCP----SGGGGGSRSKGCFKCGEEGHISRDCPNG 111
Query: 204 ----ITRGSGGGGGGR---CYNCGKSGHLARDCGAGGAGG 236
+R +G G R CY CG+ GH +R+C G G
Sbjct: 112 QKSDFSR-NGAGDCARSTACYKCGEEGHFSRECPKAGENG 150
>gi|342887520|gb|EGU87002.1| hypothetical protein FOXB_02396 [Fusarium oxysporum Fo5176]
Length = 457
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 77/167 (46%), Gaps = 26/167 (15%)
Query: 110 WKGNND---SRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGD 165
W + D SR ++ G GV +C NC +GH+++ CT + + C+NCG
Sbjct: 228 WPKSRDELLSRLDDAGEVVDRGVPLCLNCKELGHISKFCTQ-EKTERSDAVKISCFNCGA 286
Query: 166 PEHFARDCPRQQGGSNSYNN--NSG---------------GCFKCGGYGHLARDCITRGS 208
H RDCP + N+ N SG C KC GH A+DC
Sbjct: 287 DGHRVRDCPEPRVDKNACKNCGKSGHRAADCEEPPNPANVECRKCNEMGHFAKDC----P 342
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GGG C NCG+ GH+++DC +C NC K GHF+REC +
Sbjct: 343 QGGGSRACRNCGQEGHISKDCDQPRDMSTVTCRNCEKQGHFSRECPE 389
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C C GH+++ C + + C+NCG GH RDC +C NCGK G
Sbjct: 253 CLNCKELGHISKFCTQEKTERSDAVKISCFNCGADGHRVRDCPEPRVDKN-ACKNCGKSG 311
Query: 248 HFARECTKVAN 258
H A +C + N
Sbjct: 312 HRAADCEEPPN 322
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC GH++++C R S C NC HF+R+CP + S
Sbjct: 346 GSRACRNCGQEGHISKDCDQPRDMSTVT-----CRNCEKQGHFSRECPEPKDWSKVQ--- 397
Query: 187 SGGCFKCGGYGHLARDC 203
C C YGH C
Sbjct: 398 ---CSNCQEYGHTKVRC 411
>gi|320580572|gb|EFW94794.1| zinc finger protein, putative [Ogataea parapolymorpha DL-1]
Length = 390
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 62/126 (49%), Gaps = 21/126 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GHV EC+ R + CYNCG H A+ C +GG C
Sbjct: 278 CYNCKQTGHVQSECSEPLRPVS------KCYNCGKIGHLAKGCSAARGGPKV------TC 325
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG---GGSCFNCGKPG 247
KCGG H ARDC G +CY CGK+GH+++DC + G +C+ CG+ G
Sbjct: 326 HKCGGLNHFARDC------QSGVVKCYACGKTGHISKDCTSASGGSNFNAKTCYKCGESG 379
Query: 248 HFAREC 253
H ++ C
Sbjct: 380 HISKFC 385
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 60/142 (42%), Gaps = 32/142 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--RQQGGSNSYNNNS 187
CY C VGH A C R CYNC P H + DCP +Q YN
Sbjct: 233 TCYKCGQVGHFADACQETER---------LCYNCKQPGHESGDCPEPKQTTQKQCYNCKQ 283
Query: 188 GG---------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
G C+ CG GHLA+ C + GG C+ CG H ARDC +G
Sbjct: 284 TGHVQSECSEPLRPVSKCYNCGKIGHLAKGC--SAARGGPKVTCHKCGGLNHFARDCQSG 341
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
C+ CGK GH +++CT
Sbjct: 342 VV----KCYACGKTGHISKDCT 359
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C+ C G+ H AR+C S CY CG H ++DC GGSN N+
Sbjct: 323 VTCHKCGGLNHFARDCQS---------GVVKCYACGKTGHISKDCTSASGGSNF---NAK 370
Query: 189 GCFKCGGYGHLARDC 203
C+KCG GH+++ C
Sbjct: 371 TCYKCGESGHISKFC 385
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
G V CY C GH++++CTS SN+N + CY CG+ H ++ C
Sbjct: 341 GVVKCYACGKTGHISKDCTSASGGSNFNAKT--CYKCGESGHISKFC 385
>gi|146104175|ref|XP_001469750.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|398024244|ref|XP_003865283.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
gi|134074120|emb|CAM72862.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|322503520|emb|CBZ38606.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
Length = 115
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 2 SAITCYKCGEAGHMSRSCPRA-------AATRSCYNCGETGHMSRDCPSERKPKSCYN-- 52
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GHL+RDC SC+NCG
Sbjct: 53 ------CGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 DHLSREC 111
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C CYNCG++GH++RDC + SC+NCG H
Sbjct: 6 CYKCGEAGHMSRSC----PRAAATRSCYNCGETGHMSRDCPS--ERKPKSCYNCGSTDHL 59
Query: 250 ARECTKVA 257
+RECT A
Sbjct: 60 SRECTNEA 67
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CYNCGSTDHLSRECTNE---AKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTDHLSRECPDR 114
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC G GH++R+C + R+ CYNCG +H +R+CP
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERK-------PKSCYNCGSTDHLSRECP 112
>gi|296178353|dbj|BAJ07808.1| putative vasa protein [Oxycomanthus japonicus]
Length = 851
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CY C GH++R+C S GC+ CG+ HFAR+CP S
Sbjct: 191 GGRSCYKCGEDGHISRDCPSA--GGGGGGGGRGCHKCGEEGHFARECP-----SGGGGGG 243
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA-GGAGGGGSCFNCG 244
C KCG GH AR+C + G GGGGGGR C CG+ GH AR+C + GG GGG CF CG
Sbjct: 244 GRACHKCGEEGHFARECPSGGGGGGGGGRACRKCGEEGHFARECPSGGGGGGGRGCFKCG 303
Query: 245 KPGHFARECTK 255
K GH AR+CT+
Sbjct: 304 KDGHQARDCTE 314
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 67/143 (46%), Gaps = 28/143 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH AREC S C+ CG+ HFAR+CP G C
Sbjct: 222 CHKCGEEGHFARECPSGGGGGGGR----ACHKCGEEGHFARECP---SGGGGGGGGGRAC 274
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC-------------------GA 231
KCG GH AR+C + G GGGG G C+ CGK GH ARDC +
Sbjct: 275 RKCGEEGHFARECPSGGGGGGGRG-CFKCGKDGHQARDCTEEGSSGGRSGGFRGGFGNSS 333
Query: 232 GGAGGGGS-CFNCGKPGHFAREC 253
GG G + C CG+ GHFAREC
Sbjct: 334 GGDGKSDTACRKCGEEGHFAREC 356
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH AREC S + C CG+ HFAR+CP S GC
Sbjct: 247 CHKCGEEGHFARECPSGGGGGGGGGRA--CRKCGEEGHFARECP-----SGGGGGGGRGC 299
Query: 191 FKCGGYGHLARDCITR----------------GSGGGGGG--RCYNCGKSGHLARDCGAG 232
FKCG GH ARDC SGG G C CG+ GH AR+C
Sbjct: 300 FKCGKDGHQARDCTEEGSSGGRSGGFRGGFGNSSGGDGKSDTACRKCGEEGHFARECPNP 359
Query: 233 GAGG 236
AGG
Sbjct: 360 SAGG 363
>gi|198428174|ref|XP_002131234.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 2 [Ciona intestinalis]
Length = 310
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 77/181 (42%), Gaps = 53/181 (29%)
Query: 126 PGGVVCYNCDGVGHVARECT-SNRRNSNY------------------------------- 153
P C+ CD GH AREC S+ + Y
Sbjct: 43 PSNDNCFICDKSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGY 102
Query: 154 ---NNNSGGCYNCGDPEHFARDCP--------RQQGGSNSYNNNSGGCFKCGGYGHLARD 202
++ CY CG P HFAR+CP R + N+ CF+CG GH+ARD
Sbjct: 103 GTRQRDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARD 162
Query: 203 CITRGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C++ +G G CYNC K GHLARDC A C+ CGK GH AR+C + A
Sbjct: 163 CLSAENGRSRTGATNINTCYNCYKEGHLARDCPEDNA-----CYKCGKAGHLARKCPEDA 217
Query: 258 N 258
+
Sbjct: 218 D 218
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 61/154 (39%), Gaps = 44/154 (28%)
Query: 131 CYNCDGVGHVARECTS--NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C GH+AR+C S N R+ N CYNC H ARDCP
Sbjct: 150 CFRCGQPGHMARDCLSAENGRSRTGATNINTCYNCYKEGHLARDCP-----------EDN 198
Query: 189 GCFKCGGYGHLARDCITRGSGGGGG---------------------------GRCYNCGK 221
C+KCG GHLAR C G CY C
Sbjct: 199 ACYKCGKAGHLARKCPEDADRNGDARLNRREAGTKQCYLCQNVGHIQANCPEATCYRCHG 258
Query: 222 SGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GH+ARDC G C+NC +PGH AR+C +
Sbjct: 259 EGHIARDC----PNGNEECYNCRRPGHKARDCDE 288
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 65/174 (37%), Gaps = 56/174 (32%)
Query: 138 GHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSNSY----------- 183
+ +RE + R +Y + C+ C H+AR+CP Y
Sbjct: 23 SYSSRETYTPRETYDYQSRKPSNDNCFICDKSGHWARECPESDEQQREYAPRTRGGFRGR 82
Query: 184 -----------------------NNNSGGCFKCGGYGHLARDC-------ITRGSGGGGG 213
++ C+KCG GH AR+C I R
Sbjct: 83 GRGRGRGRGSYGGYGGYGGYGTRQRDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPM 142
Query: 214 GR-----CYNCGKSGHLARDCGAG-------GAGGGGSCFNCGKPGHFARECTK 255
GR C+ CG+ GH+ARDC + GA +C+NC K GH AR+C +
Sbjct: 143 GRRNNDYCFRCGQPGHMARDCLSAENGRSRTGATNINTCYNCYKEGHLARDCPE 196
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
CY C G GH+AR+C N + CYNC P H ARDC + G S
Sbjct: 251 ATCYRCHGEGHIARDCP---------NGNEECYNCRRPGHKARDCDEPRPGELS 295
>gi|299752665|ref|XP_001841159.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
gi|298409943|gb|EAU80696.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
Length = 173
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R+CTS+ + + G CY CG H AR CP G S+ + C
Sbjct: 50 CYRCGEEGHLSRDCTSDNAAAGGVSRGGECYRCGKTGHLARSCP--DSGYGSFGGSQKTC 107
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG GHL+RDC+ G +CYNC GH++RDC +C+ CG+ GH +
Sbjct: 108 YTCGGVGHLSRDCVQ-------GSKCYNCSSIGHISRDCPQPQK---RACYQCGQEGHIS 157
Query: 251 REC 253
R+C
Sbjct: 158 RDC 160
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+R+CT + + CY CG+ H +RDC + +
Sbjct: 24 GTPTCYNCGGEGHVSRDCTQAAKPKS-------CYRCGEEGHLSRDCTSDNAAAGGVSRG 76
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
G C++CG GHLAR C G G GG + CY CG GHL+RDC G C+NC
Sbjct: 77 -GECYRCGKTGHLARSCPDSGYGSFGGSQKTCYTCGGVGHLSRDCVQ-----GSKCYNCS 130
Query: 245 KPGHFARECTK 255
GH +R+C +
Sbjct: 131 SIGHISRDCPQ 141
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 23/132 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC G GH A C + CYNCG H +RDC + C
Sbjct: 7 CFNCGGFGHQAANCP--------KAGTPTCYNCGGEGHVSRDCTQAA--------KPKSC 50
Query: 191 FKCGGYGHLARDCITRGSGGGG---GGRCYNCGKSGHLARDCGAGGAGGGG----SCFNC 243
++CG GHL+RDC + + GG GG CY CGK+GHLAR C G G G +C+ C
Sbjct: 51 YRCGEEGHLSRDCTSDNAAAGGVSRGGECYRCGKTGHLARSCPDSGYGSFGGSQKTCYTC 110
Query: 244 GKPGHFARECTK 255
G GH +R+C +
Sbjct: 111 GGVGHLSRDCVQ 122
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 44/87 (50%), Gaps = 22/87 (25%)
Query: 189 GCFKCGGYGHLARDCITRGSGG----GGGGR-------------CYNCGKSGHLARDC-- 229
GCF CGG+GH A +C G+ GG G CY CG+ GHL+RDC
Sbjct: 6 GCFNCGGFGHQAANCPKAGTPTCYNCGGEGHVSRDCTQAAKPKSCYRCGEEGHLSRDCTS 65
Query: 230 ---GAGGAGGGGSCFNCGKPGHFAREC 253
AGG GG C+ CGK GH AR C
Sbjct: 66 DNAAAGGVSRGGECYRCGKTGHLARSC 92
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 19/82 (23%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
G +G CY C GVGH++R+C + CYNC H +RDCP+ Q
Sbjct: 98 GSFGGSQKTCYTCGGVGHLSRDCVQGSK----------CYNCSSIGHISRDCPQPQ---- 143
Query: 182 SYNNNSGGCFKCGGYGHLARDC 203
C++CG GH++RDC
Sbjct: 144 -----KRACYQCGQEGHISRDC 160
>gi|154345718|ref|XP_001568796.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066138|emb|CAM43928.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310630|gb|AGE92542.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++
Sbjct: 2 SALTCYKCGEAGHMSRSCPRV-------AATRSCYNCGETGHMSRDCPSER--------K 46
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CF CG HL+R+C G CYNCG +GHL+RDC SC+NCG
Sbjct: 47 PKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGHLSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 EHLSREC 111
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C + CYNCG++GH++RDC + SCFNCG H
Sbjct: 6 CYKCGEAGHMSRSCPRVAATRS----CYNCGETGHMSRDCPS--ERKPKSCFNCGSTEHL 59
Query: 250 ARECTKVA 257
+RECT A
Sbjct: 60 SRECTNEA 67
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CFNCGSTEHLSRECTNE---AKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTEHLSRECPDR 114
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
N G CYNC G GH++R+C + R+ CYNCG EH +R+CP
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERK-------PKSCYNCGSTEHLSRECP 112
>gi|213404984|ref|XP_002173264.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
gi|212001311|gb|EEB06971.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
Length = 175
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC+ GH A EC+ +R CYNCG H RDCP + +
Sbjct: 32 GSICYNCNQTGHKANECSEPQREK-------ACYNCGTAGHLVRDCPTAPPNPRA----N 80
Query: 188 GGCFKCGGYGHLARDCITRGSGGGG------------------------GGRCYNCGKSG 223
C+KCG GH+AR C T G GG G +CY+CGK+G
Sbjct: 81 AECYKCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQARDCTQGVKCYSCGKTG 140
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
H + +C +GGG C+ C +PGH A +C +
Sbjct: 141 HRSFECEQ--SGGGQLCYKCNQPGHIAVDCAQA 171
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 61/139 (43%), Gaps = 25/139 (17%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
Y G CYNC+ +GH AREC CYNC H A +C Q
Sbjct: 9 YPRTGPRCYNCNEIGHQARECV----------KGSICYNCNQTGHKANECSEPQ------ 52
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG----- 238
C+ CG GHL RDC T CY CG+ GH+AR C G GG
Sbjct: 53 --REKACYNCGTAGHLVRDCPTAPPNPRANAECYKCGRVGHIARACRTSGPAAGGRPGRS 110
Query: 239 --SCFNCGKPGHFARECTK 255
+C+ CG GH AR+CT+
Sbjct: 111 NLNCYACGSFGHQARDCTQ 129
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCIT---------------RGSGGGGGGRCYNCGKSGHLA 226
+Y C+ C GH AR+C+ S CYNCG +GHL
Sbjct: 8 TYPRTGPRCYNCNEIGHQARECVKGSICYNCNQTGHKANECSEPQREKACYNCGTAGHLV 67
Query: 227 RDCGAGGAG--GGGSCFNCGKPGHFAREC 253
RDC C+ CG+ GH AR C
Sbjct: 68 RDCPTAPPNPRANAECYKCGRVGHIARAC 96
>gi|19114592|ref|NP_593680.1| zinc finger protein Byr3 [Schizosaccharomyces pombe 972h-]
gi|543908|sp|P36627.1|BYR3_SCHPO RecName: Full=Cellular nucleic acid-binding protein homolog
gi|254734|gb|AAB23116.1| human cellular nucleic acid binding protein (CNBP) homolog
[Schizosaccharomyces pombe]
gi|1204164|emb|CAA93542.1| zinc finger protein Byr3 [Schizosaccharomyces pombe]
Length = 179
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 70/152 (46%), Gaps = 38/152 (25%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC+ GH A ECT ++ CY CG H RDCP +S N
Sbjct: 35 GSICYNCNQTGHKASECTEPQQEKT-------CYACGTAGHLVRDCP------SSPNPRQ 81
Query: 188 GG-CFKCGGYGHLARDCITRG--SGGGGGGR-----CYNCGKSGHLARDCGAG------- 232
G C+KCG GH+ARDC T G SGG GG CY CG GH ARDC G
Sbjct: 82 GAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYSCG 141
Query: 233 ----------GAGGGGSCFNCGKPGHFARECT 254
A G C+ C +PGH A CT
Sbjct: 142 KIGHRSFECQQASDGQLCYKCNQPGHIAVNCT 173
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 75/153 (49%), Gaps = 35/153 (22%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--------------CYNCGDPEHFARDC 173
G CYNC GH ARECT + + YN N G CY CG H RDC
Sbjct: 16 GPRCYNCGENGHQARECT--KGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDC 73
Query: 174 PRQQGGSNSYNNNSGG-CFKCGGYGHLARDCITRG--SGGGGGGR-----CYNCGKSGHL 225
P +S N G C+KCG GH+ARDC T G SGG GG CY CG GH
Sbjct: 74 P------SSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQ 127
Query: 226 ARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
ARDC G C++CGK GH + EC + ++
Sbjct: 128 ARDCTM-----GVKCYSCGKIGHRSFECQQASD 155
>gi|343426719|emb|CBQ70247.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 178
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR----QQGGSNSYNN 185
CY C+ GH++REC +N G CY CG H AR CP +GG
Sbjct: 49 TCYKCNETGHISRECPTNPAPVA-GGPGGECYKCGQHGHIARACPTAGPSTRGGFGGAPR 107
Query: 186 NSG-GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
G C+ CGG GHL+R+C + GG RCYNC ++GH++R+C SC+ CG
Sbjct: 108 AGGRSCYNCGGVGHLSRECTSPAGAAAGGQRCYNCNENGHISRECPKPQT---KSCYRCG 164
Query: 245 KPGHFARECTKVA 257
+ GH + C +VA
Sbjct: 165 EEGHLSAACPQVA 177
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 72/140 (51%), Gaps = 20/140 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++ +C + CY C + H +R+CP +
Sbjct: 24 GNPSCYNCGQQGHISSQCGMEAQPKT-------CYKCNETGHISRECPTNP--APVAGGP 74
Query: 187 SGGCFKCGGYGHLARDCI-----TRGSGGG----GGGRCYNCGKSGHLARDC--GAGGAG 235
G C+KCG +GH+AR C TRG GG GG CYNCG GHL+R+C AG A
Sbjct: 75 GGECYKCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYNCGGVGHLSRECTSPAGAAA 134
Query: 236 GGGSCFNCGKPGHFARECTK 255
GG C+NC + GH +REC K
Sbjct: 135 GGQRCYNCNENGHISRECPK 154
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 60/124 (48%), Gaps = 26/124 (20%)
Query: 160 CYNCGDPEHFARDCPR----------QQGGSNS---YNNNSGGCFKCGGYGHLARDCITR 206
C+NCG P H A CP QQG +S C+KC GH++R+C T
Sbjct: 7 CFNCGQPGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRECPTN 66
Query: 207 GS--GGGGGGRCYNCGKSGHLARDCGAGGA-----------GGGGSCFNCGKPGHFAREC 253
+ GG GG CY CG+ GH+AR C G GG SC+NCG GH +REC
Sbjct: 67 PAPVAGGPGGECYKCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYNCGGVGHLSREC 126
Query: 254 TKVA 257
T A
Sbjct: 127 TSPA 130
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 16/85 (18%)
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQG 178
GG GG CYNC GVGH++RECTS + +GG CYNC + H +R+CP+ Q
Sbjct: 103 GGAPRAGGRSCYNCGGVGHLSRECTSPAGAA-----AGGQRCYNCNENGHISRECPKPQT 157
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDC 203
S C++CG GHL+ C
Sbjct: 158 KS---------CYRCGEEGHLSAAC 173
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
SYN CF CG GH A C T G+ CYNCG+ GH++ CG +C+
Sbjct: 2 SYNRT---CFNCGQPGHNAAACPTAGNPS-----CYNCGQQGHISSQCGM--EAQPKTCY 51
Query: 242 NCGKPGHFAREC 253
C + GH +REC
Sbjct: 52 KCNETGHISREC 63
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 20/83 (24%)
Query: 105 GFGGYWKGNNDSRRNNGG------------GYGPGGVVCYNCDGVGHVARECTSNRRNSN 152
GFGG + S N GG G GG CYNC+ GH++REC + S
Sbjct: 101 GFGGAPRAGGRSCYNCGGVGHLSRECTSPAGAAAGGQRCYNCNENGHISRECPKPQTKS- 159
Query: 153 YNNNSGGCYNCGDPEHFARDCPR 175
CY CG+ H + CP+
Sbjct: 160 -------CYRCGEEGHLSAACPQ 175
>gi|121543757|gb|ABM55551.1| zinc finger protein-like protein [Maconellicoccus hirsutus]
Length = 142
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 71/144 (49%), Gaps = 30/144 (20%)
Query: 130 VCYNCDGVGHVARECTS------NRRNSNYNNNSGG------------CYNCGDPEHFAR 171
+CY C GH AREC S RR Y N+ G CY C + H AR
Sbjct: 6 MCYRCRETGHFARECPSFEPGKPIRREKCYKCNAFGHFARDCKEDQDRCYRCNEIGHIAR 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG--GGRCYNCGKSGHLARDC 229
DC R +++S C+ C G GH+ARDC S CYNC K+GH+ARDC
Sbjct: 66 DCVR--------SDSSPQCYSCKGIGHIARDCPDSSSNNSRHFSANCYNCNKAGHMARDC 117
Query: 230 GAGGAGGGGSCFNCGKPGHFAREC 253
+GGG +C+ C K GH +R+C
Sbjct: 118 --PNSGGGKTCYVCRKQGHISRDC 139
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 188 GGCFKCGGYGHLARDCITRGSGGG-GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
G C++C GH AR+C + G +CY C GH ARDC C+ C +
Sbjct: 5 GMCYRCRETGHFARECPSFEPGKPIRREKCYKCNAFGHFARDCKEDQ----DRCYRCNEI 60
Query: 247 GHFARECTK 255
GH AR+C +
Sbjct: 61 GHIARDCVR 69
>gi|384496468|gb|EIE86959.1| hypothetical protein RO3G_11670 [Rhizopus delemar RA 99-880]
Length = 229
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG----GCYNCGDPEHFARDC--------PRQQG 178
C+NC GVGH+ +CTS R + C+NC H A++C PR
Sbjct: 52 CFNCGGVGHIQSQCTSPRSTAPVATKPSRALPQCFNCQQHGHLAKECTQPSQPREPRNNS 111
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG-AGGG 237
+ C KCGG H A+DC CYNC K GH+AR+C + G
Sbjct: 112 LRKPRRQRNIICHKCGGINHFAKDC------KASDILCYNCNKYGHIARECTSPGFKPKP 165
Query: 238 GSCFNCGKPGHFARECT 254
+CF C KPGH AR C
Sbjct: 166 KTCFVCQKPGHIARNCL 182
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CYNC GH + +CT+ + C+NCG H C PR + + +
Sbjct: 27 LCYNCKQPGHYSADCTTPK-----VVEPKQCFNCGGVGHIQSQCTSPRSTAPVATKPSRA 81
Query: 188 -GGCFKCGGYGHLARDCI------------TRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
CF C +GHLA++C R C+ CG H A+DC A
Sbjct: 82 LPQCFNCQQHGHLAKECTQPSQPREPRNNSLRKPRRQRNIICHKCGGINHFAKDCKASDI 141
Query: 235 GGGGSCFNCGKPGHFARECT 254
C+NC K GH ARECT
Sbjct: 142 ----LCYNCNKYGHIARECT 157
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 32/125 (25%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C VGH A C R CYNC P H++ DC + C
Sbjct: 8 CYKCGNVGHFANVCPEAER---------LCYNCKQPGHYSADC------TTPKVVEPKQC 52
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
F CGG GH+ C + S + + CFNC + GH A
Sbjct: 53 FNCGGVGHIQSQCTSPRSTAPVATK-----------------PSRALPQCFNCQQHGHLA 95
Query: 251 RECTK 255
+ECT+
Sbjct: 96 KECTQ 100
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+KCG GH A C CYNC + GH + DC CFNCG GH
Sbjct: 7 SCYKCGNVGHFANVC------PEAERLCYNCKQPGHYSADCTTPKVVEPKQCFNCGGVGH 60
Query: 249 FARECT 254
+CT
Sbjct: 61 IQSQCT 66
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
++C+ C G+ H A++C + + CYNC H AR+C S +
Sbjct: 121 IICHKCGGINHFAKDCKA---------SDILCYNCNKYGHIAREC-----TSPGFKPKPK 166
Query: 189 GCFKCGGYGHLARDCITR 206
CF C GH+AR+C+ +
Sbjct: 167 TCFVCQKPGHIARNCLVK 184
>gi|401623989|gb|EJS42066.1| gis2p [Saccharomyces arboricola H-6]
Length = 153
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 23/139 (16%)
Query: 130 VCYNCDGVGHVARECTSNRR---NSNYNNNSGG----------CYNCGDPEHFARDCPRQ 176
+CYNC+ GHV +CT R YN G C+NC H +R+CP
Sbjct: 24 LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQRCFNCNQTGHISRECPEP 83
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ S + C+KCGG H+A+DC+ GG G +CY CG++GH++RDC
Sbjct: 84 KKASRF---SKVSCYKCGGPNHMAKDCMK--EDGGNGMKCYTCGQAGHMSRDC-----QN 133
Query: 237 GGSCFNCGKPGHFARECTK 255
C+NC + GH ++EC K
Sbjct: 134 DKLCYNCNETGHISKECPK 152
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 23/136 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSG 188
CY C +GH+A +C S R CYNC P H DC PR YN
Sbjct: 6 CYVCGKIGHLAEDCDSERL----------CYNCNKPGHVQTDCTMPRTVEFKQCYNCGET 55
Query: 189 G----------CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G CF C GH++R+C + + CY CG H+A+DC G G
Sbjct: 56 GHVRSECTVQRCFNCNQTGHISRECPEPKKASRFSKVSCYKCGGPNHMAKDCMKEDGGNG 115
Query: 238 GSCFNCGKPGHFAREC 253
C+ CG+ GH +R+C
Sbjct: 116 MKCYTCGQAGHMSRDC 131
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CGK GHLA DC + C+NC KPGH +CT
Sbjct: 6 CYVCGKIGHLAEDCDSERL-----CYNCNKPGHVQTDCT 39
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 42/101 (41%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CY C G P H A+DC ++ GG N
Sbjct: 92 VSCYKCGG-----------------------------PNHMAKDCMKEDGG------NGM 116
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ CG GH++RDC CYNC ++GH++++C
Sbjct: 117 KCYTCGQAGHMSRDC-------QNDKLCYNCNETGHISKEC 150
>gi|164656387|ref|XP_001729321.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
gi|159103212|gb|EDP42107.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
Length = 171
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P C+ C+ GHV+REC + + +G CY CG+ H AR CP GGS +
Sbjct: 45 PVPKTCFRCNEAGHVSRECP--HAEARGDAAAGECYRCGETGHIARMCP-VSGGSGA-PR 100
Query: 186 NSGGCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
N C+ CGG GHL+RDC + G+ +CYNCG GHL+R+C SC+ CG
Sbjct: 101 NPRACYNCGGVGHLSRDCSSAPGAAATASMKCYNCGNMGHLSRECPRPSQR---SCYTCG 157
Query: 245 KPGHFARECTKVA 257
H A +C + A
Sbjct: 158 SSDHLAAQCPQAA 170
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 72/136 (52%), Gaps = 19/136 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GHV+ +CT+ C+ C + H +R+CP + ++
Sbjct: 24 GNPTCYNCGQQGHVSVDCTNQPVPKT-------CFRCNEAGHVSRECPHAEARGDA---A 73
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR----CYNCGKSGHLARDC-GAGGAGGGGS-- 239
+G C++CG GH+AR C SGG G R CYNCG GHL+RDC A GA S
Sbjct: 74 AGECYRCGETGHIARMCPV--SGGSGAPRNPRACYNCGGVGHLSRDCSSAPGAAATASMK 131
Query: 240 CFNCGKPGHFARECTK 255
C+NCG GH +REC +
Sbjct: 132 CYNCGNMGHLSRECPR 147
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH C S + CYNCG H + DC Q C
Sbjct: 7 CYNCGRPGHTIAACPSA--------GNPTCYNCGQQGHVSVDCTNQPVPKT--------C 50
Query: 191 FKCGGYGHLARDCI-TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG----SCFNCGK 245
F+C GH++R+C G G CY CG++GH+AR C G G +C+NCG
Sbjct: 51 FRCNEAGHVSRECPHAEARGDAAAGECYRCGETGHIARMCPVSGGSGAPRNPRACYNCGG 110
Query: 246 PGHFARECTKV 256
GH +R+C+
Sbjct: 111 VGHLSRDCSSA 121
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
G + CYNC +GH++REC + S CY CG +H A CP+
Sbjct: 123 GAAATASMKCYNCGNMGHLSRECPRPSQRS--------CYTCGSSDHLAAQCPQ 168
>gi|449671299|ref|XP_002162674.2| PREDICTED: uncharacterized protein LOC100212542 [Hydra
magnipapillata]
Length = 512
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 158 GGCYNCGDPEHFARDC---PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
G C C + HFA+DC P GG N G C KCGG GH AR+C + G
Sbjct: 131 GACRRCNEEGHFAKDCTQAPASNGG------NKGACHKCGGEGHFARECPNTETAPRSGA 184
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
C+ CG+ GH AR C G GGG+C C + GHFAREC + N
Sbjct: 185 -CHKCGEEGHFARQCPKSGPPGGGACRKCNEVGHFARECPQNQN 227
>gi|401420034|ref|XP_003874506.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490742|emb|CBZ26006.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 115
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 2 SAITCYKCGEAGHMSRSCPRA-------AATRSCYNCGETGHLSRDCPSERKPKSCYN-- 52
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GH++RDC SC+NCG
Sbjct: 53 ------CGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 EHLSREC 111
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C CYNCG++GHL+RDC + SC+NCG H
Sbjct: 6 CYKCGEAGHMSRSC----PRAAATRSCYNCGETGHLSRDCPS--ERKPKSCYNCGSTEHL 59
Query: 250 ARECTKVA 257
+RECT A
Sbjct: 60 SRECTNEA 67
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CYNCGSTEHLSRECTNE---AKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTEHLSRECPDR 114
>gi|116197715|ref|XP_001224669.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
gi|88178292|gb|EAQ85760.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
Length = 200
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 73/158 (46%), Gaps = 37/158 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GH++R+C +++ CY CG P H +R+CP GG +S +
Sbjct: 47 GAAKCYNCGGEGHMSRDCPEGPKDTKT------CYRCGQPGHISRNCPTDGGGGHSGGQS 100
Query: 187 SGGCFKCGGYGHLARDC-----------------------ITRGSGGGG--------GGR 215
C+KCG GH+AR+C GG G G +
Sbjct: 101 GAECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDCVNGSK 160
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG SGH++RDC GG C+ C +PGH +C
Sbjct: 161 CYNCGVSGHVSRDCPKESTGGEKICYKCQQPGHVQSQC 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT----RGSG 209
N + CYNCG H +RDCP + + C++CG GH++R+C T SG
Sbjct: 45 NRGAAKCYNCGGEGHMSRDCPEGPKDTKT-------CYRCGQPGHISRNCPTDGGGGHSG 97
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGG--------------SCFNCGKPGHFARECT 254
G G CY CG+ GH+AR+C G A GGG +C++CG GH +R+C
Sbjct: 98 GQSGAECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDCV 156
>gi|327296678|ref|XP_003233033.1| zinc knuckle nucleic acid binding protein [Trichophyton rubrum CBS
118892]
gi|326464339|gb|EGD89792.1| zinc knuckle nucleic acid binding protein [Trichophyton rubrum CBS
118892]
Length = 208
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 35/150 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR---QQGGSNSYNNN- 186
CY+C G+GHV +C + R N +N CY+C P H AR+CP QQ + N
Sbjct: 21 CYHCQGLGHVQADCPTLRLNGGASN--ARCYSCNLPGHLARNCPSGGIQQQNPQAVRNTG 78
Query: 187 -------------------SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
+ C+KCGG H ARDC + +CY CGK GH++R
Sbjct: 79 SARGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISR 132
Query: 228 DCGAGGAGG----GGSCFNCGKPGHFAREC 253
DC A G G C+ C + GH +R+C
Sbjct: 133 DCTAPNGGPLSSVGKVCYKCSQAGHISRDC 162
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 39/148 (26%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTS---NRRNSNYNNNSGG----- 159
G+ + + + R NGG CY+C+ GH+AR C S ++N N+G
Sbjct: 28 GHVQADCPTLRLNGGA---SNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNTGSARGGF 84
Query: 160 ----------------CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 85 NAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDC 134
Query: 204 ITR--GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 135 TAPNGGPLSSVGKVCYKCSQAGHISRDC 162
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 36/120 (30%)
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLA 226
H + CPR + + C+ C G GH+ DC T R +GG RCY+C GHLA
Sbjct: 5 HESNGCPRPR------TTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLA 58
Query: 227 RDCGAGG--------------AGGG---------------GSCFNCGKPGHFARECTKVA 257
R+C +GG A GG +C+ CG P HFAR+C A
Sbjct: 59 RNCPSGGIQQQNPQAVRNTGSARGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQA 118
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 24/132 (18%)
Query: 87 NNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG-------------PGGVVCYN 133
+N Y+ N G GG + N + RN G G P CY
Sbjct: 44 SNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNTGSARGGFNAGFRGGPAGYPRAATCYK 103
Query: 134 CDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKC 193
C G H AR+C + CY CG H +RDC GG S C+KC
Sbjct: 104 CGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGGPLSSVGKV--CYKC 152
Query: 194 GGYGHLARDCIT 205
GH++RDC T
Sbjct: 153 SQAGHISRDCPT 164
>gi|302422156|ref|XP_003008908.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261352054|gb|EEY14482.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|346970067|gb|EGY13519.1| cellular nucleic acid-binding protein [Verticillium dahliae
VdLs.17]
Length = 189
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 71/164 (43%), Gaps = 42/164 (25%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++REC +++ CY CG P H +RDCP+ G
Sbjct: 30 GPAKCYNCGNEGHLSRECPDGPKDNK------SCYRCGQPGHISRDCPQSGGSMGGGGGG 83
Query: 187 SGGCFKCGGYGHLARDC----------------------------ITRGSGGGG------ 212
G C+KCG GH+AR C GG G
Sbjct: 84 GGECYKCGELGHMARQCPKAGGGFGGGYGGGAGGYSGGGGYGAPKTCYSCGGFGHMSRDC 143
Query: 213 --GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G +CYNCG++GH +RDC GG GG C+ C +PGH +C
Sbjct: 144 TNGSKCYNCGENGHFSRDCPKGGEGGDKICYKCQQPGHIQSQCP 187
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 16/76 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH++R+CT N CYNCG+ HF+RDCP+ G +
Sbjct: 129 TCYSCGGFGHMSRDCT----------NGSKCYNCGENGHFSRDCPKGGEGGDKI------ 172
Query: 190 CFKCGGYGHLARDCIT 205
C+KC GH+ C +
Sbjct: 173 CYKCQQPGHIQSQCPS 188
>gi|219125932|ref|XP_002183223.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405498|gb|EEC45441.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 91
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WFD KG+GFI PDDG D+FVHQ +I+++G+R+L + ++VE+ V+ +++G+ +A+
Sbjct: 8 GVVKWFDTMKGFGFIMPDDGSTDVFVHQTAIQTEGFRSLADGEAVEYVVEEDSNGRKKAV 67
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGY 92
VT PGG V + +N+ Y
Sbjct: 68 QVTGPGGEEVQGAPFRPSNDYDSY 91
>gi|358386406|gb|EHK24002.1| hypothetical protein TRIVIDRAFT_138406, partial [Trichoderma virens
Gv29-8]
Length = 194
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 32/149 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP---------------- 174
CY+C G+GHV +C + R + SG CYNCG P H AR CP
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGT--ATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRG 110
Query: 175 ----RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
G + C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GFVGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 164
Query: 231 AGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 165 APNGGPLNTAGKTCYQCGEAGHISRDCPQ 193
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 66/155 (42%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------STEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---------- 238
C+ C G GH+ DC T R SG GRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRGGF 112
Query: 239 ----------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 VGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQA 147
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCPRQ 176
+ CY C +GH++R+CT+ N N +G CY CG+ H +RDCP++
Sbjct: 147 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYQCGEAGHISRDCPQK 194
>gi|154345720|ref|XP_001568797.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066139|emb|CAM43929.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310608|gb|AGE92531.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++
Sbjct: 2 SALTCYKCGEAGHMSRSCPRV-------AATRSCYNCGETGHMSRDCPSER--------K 46
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CF CG HL+R+C G CYNCG +GH++RDC SC+NCG
Sbjct: 47 PKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 EHLSREC 111
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH++R C + CYNCG++GH++RDC + SCFNCG H
Sbjct: 6 CYKCGEAGHMSRSCPRVAATRS----CYNCGETGHMSRDCPS--ERKPKSCFNCGSTEHL 59
Query: 250 ARECTKVA 257
+RECT A
Sbjct: 60 SRECTNEA 67
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CFNCGSTEHLSRECTNE---AKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTEHLSRECPDR 114
>gi|326476591|gb|EGE00601.1| zinc knuckle domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326483934|gb|EGE07944.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 208
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 35/150 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR---QQGGSNSYNN-- 185
CY+C G+GHV +C + R N +N CY+C P H AR+CP QQ + N
Sbjct: 21 CYHCQGLGHVQADCPTLRLNGGASN--ARCYSCNLPGHLARNCPSGGIQQQNPQAVRNAG 78
Query: 186 ------------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
+ C+KCGG H ARDC + +CY CGK GH++R
Sbjct: 79 STRGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISR 132
Query: 228 DCGAGGAGG----GGSCFNCGKPGHFAREC 253
DC A G G C+ C + GH +R+C
Sbjct: 133 DCTAPNGGPLSSVGKVCYKCSQAGHISRDC 162
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 39/148 (26%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTS---NRRNSNYNNNSGG----- 159
G+ + + + R NGG CY+C+ GH+AR C S ++N N+G
Sbjct: 28 GHVQADCPTLRLNGGA---SNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNAGSTRGGF 84
Query: 160 ----------------CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 85 NAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDC 134
Query: 204 ITR--GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 135 TAPNGGPLSSVGKVCYKCSQAGHISRDC 162
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 36/120 (30%)
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLA 226
H + CPR + + C+ C G GH+ DC T R +GG RCY+C GHLA
Sbjct: 5 HESNGCPRPR------TTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLA 58
Query: 227 RDCGAGGA---------------GG--------------GGSCFNCGKPGHFARECTKVA 257
R+C +GG GG +C+ CG P HFAR+C A
Sbjct: 59 RNCPSGGIQQQNPQAVRNAGSTRGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQA 118
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 24/132 (18%)
Query: 87 NNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYG-------------PGGVVCYN 133
+N Y+ N G GG + N + RN G G P CY
Sbjct: 44 SNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNAGSTRGGFNAGFRGGPAGYPRAATCYK 103
Query: 134 CDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKC 193
C G H AR+C + CY CG H +RDC GG S C+KC
Sbjct: 104 CGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGGPLSSVGKV--CYKC 152
Query: 194 GGYGHLARDCIT 205
GH++RDC T
Sbjct: 153 SQAGHISRDCPT 164
>gi|427787167|gb|JAA59035.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 240
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 69/153 (45%), Gaps = 28/153 (18%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG-------------------GCYNCG 164
+GP + CYNC +GH+AREC + + G CY CG
Sbjct: 97 HGPDEMSCYNCGKMGHIARECKEQEKTCYICHKQGHISRDCEQDERRSGAGLSLQCYLCG 156
Query: 165 DPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGH 224
H +RDCP + + C+ CG GH++RDC G CY C + GH
Sbjct: 157 KLGHISRDCPNSE-------RDDRKCYNCGHLGHISRDCPEAGGNDAVADVCYRCNERGH 209
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
+AR+C + A C++CG+ GH AREC A
Sbjct: 210 IARNCRSTRA--NNRCYHCGEVGHLARECEMKA 240
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 126 PGGVVCYNCDGVGHVARECTSNR-------------RNSNYNNNSGGCYNCGDPEHFARD 172
P CY C+ +GH AR+C ++ + + CYNCG H AR+
Sbjct: 57 PIREKCYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIARE 116
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARDCG 230
C Q+ C+ C GH++RDC R SG G +CY CGK GH++RDC
Sbjct: 117 CKEQE----------KTCYICHKQGHISRDCEQDERRSGAGLSLQCYLCGKLGHISRDC- 165
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C+NCG GH +R+C +
Sbjct: 166 PNSERDDRKCYNCGHLGHISRDCPEA 191
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 61/151 (40%), Gaps = 44/151 (29%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------------CYNCG 164
CY C +GH AREC + + G CY C
Sbjct: 7 CYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREKCYKCN 66
Query: 165 DPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGH 224
HFARDC + C++C G GH+++DC G CYNCGK GH
Sbjct: 67 RIGHFARDCKEAE----------DRCYRCNGTGHISKDC----QHGPDEMSCYNCGKMGH 112
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+AR+C +C+ C K GH +R+C +
Sbjct: 113 IARECKEQEK----TCYICHKQGHISRDCEQ 139
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
GG VCY C+ GH+AR C S R N+ CY+CG+ H AR+C
Sbjct: 190 EAGGNDAVADVCYRCNERGHIARNCRSTRANNR-------CYHCGEVGHLAREC 236
>gi|193875878|gb|ACF24575.1| glycine-rich nucleic acid binding protein [Gymnochlora stellata]
Length = 290
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R +G WF+ KGYGFI P +G D+FVHQ +IK+ G+R+L E + VEFDV+++A G+
Sbjct: 23 RQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRK 82
Query: 66 QALDVTAPGGAPV 78
+A +VT P GA V
Sbjct: 83 KARNVTGPNGAYV 95
>gi|67423403|dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH +REC + C+ CG+ HF+R+CP+ S C
Sbjct: 167 CHKCGEEGHFSRECPQAGGGGGSGPRT--CHKCGEEGHFSRECPQ----GGGGGGGSRAC 220
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
KCG GH +R+C G GGG G R C+ CG+ GH++RDC GG GG CF C + GH
Sbjct: 221 HKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEEGHVSRDCPQGGGGGDSKCFKCHEAGHT 280
Query: 250 AREC 253
+++C
Sbjct: 281 SKDC 284
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH+AREC + S C+ CG+ HF+R+CP+ GG S
Sbjct: 137 GGRPCHKCGEEGHMARECP---KGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRT 193
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---SCFNC 243
C KCG GH +R+C G GGGG C+ CG+ GH +R+C GG GGG +C C
Sbjct: 194 ---CHKCGEEGHFSRECPQGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCHKC 250
Query: 244 GKPGHFARECTK 255
G+ GH +R+C +
Sbjct: 251 GEEGHVSRDCPQ 262
>gi|146104178|ref|XP_001469751.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
gi|134074121|emb|CAM72863.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
Length = 115
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C GH++R C + CYNCG+ H +RDCP ++ + YN
Sbjct: 2 SAITCYKCGEAGHMSRSCPRA-------AVTRSCYNCGETGHMSRDCPSERKPKSCYN-- 52
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG HL+R+C G CYNCG +GH++RDC SC+NCG
Sbjct: 53 ------CGSTDHLSRECTNEAKAGADTRSCYNCGGTGHMSRDC--PNERKPKSCYNCGST 104
Query: 247 GHFAREC 253
H +REC
Sbjct: 105 DHLSREC 111
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 14/72 (19%)
Query: 190 CFKCGGYGHLARDC----ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
C+KCG GH++R C +TR CYNCG++GH++RDC + SC+NCG
Sbjct: 6 CYKCGEAGHMSRSCPRAAVTRS--------CYNCGETGHMSRDCPS--ERKPKSCYNCGS 55
Query: 246 PGHFARECTKVA 257
H +RECT A
Sbjct: 56 TDHLSRECTNEA 67
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++RECT+ + ++ CYNCG H +RDCP ++ + YN
Sbjct: 50 CYNCGSTDHLSRECTNE---AKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYN------ 100
Query: 191 FKCGGYGHLARDCITR 206
CG HL+R+C R
Sbjct: 101 --CGSTDHLSRECPDR 114
>gi|224000840|ref|XP_002290092.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
gi|220973514|gb|EED91844.1| cold-shock DNA-binding domain-containing protein, partial
[Thalassiosira pseudonana CCMP1335]
Length = 72
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 14 FDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVTAP 73
FD AKG+GFI PDDG D+FVHQ SIK +G+R+L EN++VEF V+ + +G+ +ALDVT P
Sbjct: 1 FDTAKGFGFIVPDDGTKDVFVHQTSIKVEGFRSLAENEAVEFRVETDTNGRLRALDVTGP 60
Query: 74 GGAPVHSSKNN 84
G+ V + N
Sbjct: 61 DGSDVQGAPFN 71
>gi|75214630|gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
Length = 369
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 57/127 (44%), Gaps = 28/127 (22%)
Query: 160 CYNCGDPEHFARDC------PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG------ 207
CY CG H+ARDC P + G + +G C+KCG GH ARDC +
Sbjct: 231 CYKCGKEGHWARDCTLQSPIPPSEMGPVRSTSAAGECYKCGKQGHWARDCTAQSGNPTYE 290
Query: 208 ----SGGGGGGRCYNCGKSGHLARDCG------------AGGAGGGGSCFNCGKPGHFAR 251
G CY CGK GH ARDC A G C+ CGKPGH+AR
Sbjct: 291 PGKVKSSSSSGECYKCGKQGHWARDCTGQSGNQQFQSGQAKSTSSAGDCYKCGKPGHWAR 350
Query: 252 ECTKVAN 258
+CT A
Sbjct: 351 DCTLAAQ 357
>gi|198428176|ref|XP_002131221.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 1 [Ciona intestinalis]
Length = 299
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 54/176 (30%)
Query: 126 PGGVVCYNCDGVGHVARECT-SNRRNSNY------------------------------- 153
P C+ CD GH AREC S+ + Y
Sbjct: 43 PSNDNCFICDKSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGY 102
Query: 154 ---NNNSGGCYNCGDPEHFARDCP--------RQQGGSNSYNNNSGGCFKCGGYGHLARD 202
++ CY CG P HFAR+CP R + N+ CF+CG GH+ARD
Sbjct: 103 GTRQRDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARD 162
Query: 203 CITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
C++ + CYNC K GHLARDC A C+ CGK GH AR+C + A+
Sbjct: 163 CLSAENA------CYNCYKEGHLARDCPEDNA-----CYKCGKAGHLARKCPEDAD 207
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 67/177 (37%), Gaps = 61/177 (34%)
Query: 130 VCYNCDGVGHVARECTSN---------------RRNSNYNNNSGGCYNCGDPEHFARDCP 174
VCY C GH AREC ++ RRN++Y C+ CG P H ARDC
Sbjct: 111 VCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDY------CFRCGQPGHMARDCL 164
Query: 175 RQQGGS-NSYNN--------NSGGCFKCGGYGHLARDCITRGSGGGGG------------ 213
+ N Y C+KCG GHLAR C G
Sbjct: 165 SAENACYNCYKEGHLARDCPEDNACYKCGKAGHLARKCPEDADRNGDARLNRREAGTKQC 224
Query: 214 ---------------GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CY C GH+ARDC G C+NC +PGH AR+C +
Sbjct: 225 YLCQNVGHIQANCPEATCYRCHGEGHIARDC----PNGNEECYNCRRPGHKARDCDE 277
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 62/167 (37%), Gaps = 53/167 (31%)
Query: 138 GHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSNSY----------- 183
+ +RE + R +Y + C+ C H+AR+CP Y
Sbjct: 23 SYSSRETYTPRETYDYQSRKPSNDNCFICDKSGHWARECPESDEQQREYAPRTRGGFRGR 82
Query: 184 -----------------------NNNSGGCFKCGGYGHLARDC-------ITRGSGGGGG 213
++ C+KCG GH AR+C I R
Sbjct: 83 GRGRGRGRGSYGGYGGYGGYGTRQRDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPM 142
Query: 214 GR-----CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GR C+ CG+ GH+ARDC +C+NC K GH AR+C +
Sbjct: 143 GRRNNDYCFRCGQPGHMARDC----LSAENACYNCYKEGHLARDCPE 185
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
CY C G GH+AR+C N + CYNC P H ARDC + G S
Sbjct: 240 ATCYRCHGEGHIARDCP---------NGNEECYNCRRPGHKARDCDEPRPGELS 284
>gi|225710484|gb|ACO11088.1| DNA-binding protein HEXBP [Caligus rogercresseyi]
Length = 397
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 16/94 (17%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+ CG HF+R+C GGSN CFKCG GH +R+C T GGG +C+NC
Sbjct: 280 CFKCGKEGHFSRECTESVGGSN--------CFKCGEVGHFSRECPT-----GGGDKCFNC 326
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ GH++RDC SC+NC + GH +REC
Sbjct: 327 KQEGHISRDC---PEKRNVSCYNCNETGHMSREC 357
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CFKCG GH +R+C + GG C+ CG+ GH +R+C GG G CFNC + GH
Sbjct: 280 CFKCGKEGHFSREC----TESVGGSNCFKCGEVGHFSRECPTGG---GDKCFNCKQEGHI 332
Query: 250 ARECTKVAN 258
+R+C + N
Sbjct: 333 SRDCPEKRN 341
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 23/80 (28%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSNSY 183
GG C+ C VGH +REC +GG C+NC H +RDCP ++ S
Sbjct: 298 GGSNCFKCGEVGHFSRECP-----------TGGGDKCFNCKQEGHISRDCPEKRNVS--- 343
Query: 184 NNNSGGCFKCGGYGHLARDC 203
C+ C GH++R+C
Sbjct: 344 ------CYNCNETGHMSREC 357
>gi|358395035|gb|EHK44428.1| hypothetical protein TRIATDRAFT_300647 [Trichoderma atroviride IMI
206040]
Length = 222
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 71/153 (46%), Gaps = 33/153 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-------------- 176
CY+C G+GHV +C + R + G CYNCG P H AR CP
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGTATG--GRCYNCGQPGHLARACPNPGNPGMGRGAPMGRG 110
Query: 177 ------QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
G + C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GFVGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 164
Query: 231 AGGAG----GGGSCFNCGKPGHFARECT-KVAN 258
A G G +C+ CG+ GH +R+C K AN
Sbjct: 165 APNGGPLNTAGKTCYQCGEAGHISRDCPQKTAN 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 67/155 (43%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------STEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---------- 238
C+ C G GH+ DC T R SG GGRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGRGAPMGRGGF 112
Query: 239 ----------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 VGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQA 147
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCPRQQGGSNSYNNN 186
+ CY C +GH++R+CT+ N N +G CY CG+ H +RDCP Q +N+ NN
Sbjct: 147 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYQCGEAGHISRDCP--QKTANTEINN 202
Query: 187 S 187
Sbjct: 203 E 203
>gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mammillata]
Length = 851
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNSYNNNS 187
C+ C GH++REC S +S C+ CG+ H +RDCP +
Sbjct: 197 TCFKCGEEGHMSRECPSADSSSGGFGGGKSRGCFKCGEEGHMSRDCPSGGSTGFGGGKSK 256
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGR----CYNCGKSGHLARDCGAGGAGG--GGSCF 241
CFKCG GH++RDC + GS GG GG C+ CG+ GH++R+C +GG G CF
Sbjct: 257 S-CFKCGEEGHMSRDCPSGGSQGGFGGGRPKGCFKCGEEGHMSRECPSGGDSSNRGKGCF 315
Query: 242 NCGKPGHFAREC 253
CG+ GH AR+C
Sbjct: 316 KCGEEGHMARDC 327
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++R+C S S C+ CG+ H +RDCP GC
Sbjct: 229 CFKCGEEGHMSRDCPSGGSTGFGGGKSKSCFKCGEEGHMSRDCPSGGSQGGFGGGRPKGC 288
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
FKCG GH++R+C + G G C+ CG+ GH+ARDC + G
Sbjct: 289 FKCGEEGHMSRECPSGGDSSNRGKGCFKCGEEGHMARDCPSAG 331
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 130 VCYNCDGVGHVARECTS-----NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
C+ C GH++REC S + C+ CG+ H +R+CP S +
Sbjct: 163 TCFKCGEEGHMSRECPSADSSSGGFGGSGGGRPKTCFKCGEEGHMSRECPSADSSSGGFG 222
Query: 185 NNSGG-CFKCGGYGHLARDC---ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS- 239
CFKCG GH++RDC + G GGG C+ CG+ GH++RDC +GG+ GG
Sbjct: 223 GGKSRGCFKCGEEGHMSRDCPSGGSTGFGGGKSKSCFKCGEEGHMSRDCPSGGSQGGFGG 282
Query: 240 -----CFNCGKPGHFAREC 253
CF CG+ GH +REC
Sbjct: 283 GRPKGCFKCGEEGHMSREC 301
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCI---TRGSGGGGGGR---CYNCGKSGHLARDCGAG 232
G +S NN GCFKCG GH +R+C +G G GGGR C+ CG+ GH++R+C +
Sbjct: 121 GESSSNNKGKGCFKCGEEGHKSRECPKGGQQGFGASGGGRPKTCFKCGEEGHMSRECPSA 180
Query: 233 GAGGGG----------SCFNCGKPGHFAREC 253
+ GG +CF CG+ GH +REC
Sbjct: 181 DSSSGGFGGSGGGRPKTCFKCGEEGHMSREC 211
>gi|74272681|gb|ABA01136.1| putative nucleic acid-binding protein, partial [Chlamydomonas
incerta]
Length = 226
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
M + R G V WF+ KG+GFI P GG DLFVHQ +I S+G+R+L E ++VEF+V+
Sbjct: 1 MGEQLRQQGTVKWFNATKGFGFITPGGGGEDLFVHQTNINSEGFRSLREGEAVEFEVEAG 60
Query: 61 ADGKYQALDVTAPGGAPVHSSKNN 84
DG+ +A++VT P GA + N
Sbjct: 61 PDGRSKAVNVTGPAGAAPEGAPRN 84
>gi|260408201|gb|ACX37415.1| vasa [Botryllus schlosseri]
Length = 655
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
+NS C+ CG H +R+CP GGS GCFKCG GH++R+C GGG
Sbjct: 48 SNSRACFKCGQEGHMSRECPEGGGGSRPK-----GCFKCGEEGHMSREC----PSGGGDS 98
Query: 215 R---CYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPGHFAREC 253
R C+ CG+ GH++R+C GG G CF CG+ GH +REC
Sbjct: 99 RPKGCFKCGEEGHMSRECPTGGGGDSRPKGCFKCGEEGHMSREC 142
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 15/102 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++REC S GC+ CG+ H +R+CP GG +S GC
Sbjct: 53 CFKCGQEGHMSRECPEGGGGSRPK----GCFKCGEEGHMSRECP--SGGGDS---RPKGC 103
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR---CYNCGKSGHLARDC 229
FKCG GH++R+C T GGGG R C+ CG+ GH++R+C
Sbjct: 104 FKCGEEGHMSRECPT---GGGGDSRPKGCFKCGEEGHMSREC 142
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GGG P G C+ C GH++REC S +S GC+ CG+ H +R+CP GG
Sbjct: 70 GGGSRPKG--CFKCGEEGHMSRECPSGGGDSRPK----GCFKCGEEGHMSRECPTGGGG- 122
Query: 181 NSYNNNSGGCFKCGGYGHLARDC 203
++ GCFKCG GH++R+C
Sbjct: 123 ---DSRPKGCFKCGEEGHMSREC 142
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS-CFNCGKPGHFAREC 253
T G G C+ CG+ GH++R+C GG G CF CG+ GH +REC
Sbjct: 42 TFGKSGSNSRACFKCGQEGHMSRECPEGGGGSRPKGCFKCGEEGHMSREC 91
>gi|148234211|ref|NP_001091131.1| uncharacterized protein LOC100036881 [Xenopus laevis]
gi|120538253|gb|AAI29585.1| LOC100036881 protein [Xenopus laevis]
Length = 131
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQL- 59
MA+LT G WF+ KGYGF+ PDDG D+FVHQ +I +DG+R+L E + VEF V
Sbjct: 1 MAKLT---GTCKWFNAEKGYGFLTPDDGSPDIFVHQSTIHADGFRSLAEGEPVEFSVITD 57
Query: 60 EADGKYQALDVTAPGGAPV 78
E GK +A DVT P GA V
Sbjct: 58 ERSGKLKAADVTGPNGAAV 76
>gi|300122852|emb|CBK23859.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 70/148 (47%), Gaps = 25/148 (16%)
Query: 111 KGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTS---NRRNSNYNNNSGGCYNCGDPE 167
K + R N P V CY C G GH++R+C S NRR + CYNCG P
Sbjct: 12 KARDCPNRENSNNERP--VKCYICGGFGHISRDCPSESGNRRETT-------CYNCGKPG 62
Query: 168 HFARDCPRQQGGS-NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLA 226
H +RDCP + N + C KC GH+ARDC C+NC ++GH+A
Sbjct: 63 HISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDC-------PNDIVCHNCHQAGHVA 115
Query: 227 RDCGAGGAGGGGSCFNCGKPGHFARECT 254
RDC C NC +PGH AR C
Sbjct: 116 RDC-----PNEALCHNCNQPGHLARNCP 138
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDCP ++ NS N C+ CGG+GH++RDC + SG CYNC
Sbjct: 3 CYVCGEKGHKARDCPNRE---NSNNERPVKCYICGGFGHISRDCPSE-SGNRRETTCYNC 58
Query: 220 GKSGHLARDCGAGGAGGGGS-------CFNCGKPGHFARECT 254
GK GH++RDC C C + GH AR+C
Sbjct: 59 GKPGHISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCP 100
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 21/78 (26%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +VC+NC GHVAR+C N C+NC P H AR+CP
Sbjct: 100 PNDIVCHNCHQAGHVARDCP----------NEALCHNCNQPGHLARNCP----------- 138
Query: 186 NSGGCFKCGGYGHLARDC 203
N G C KCG GH+ARDC
Sbjct: 139 NEGVCRKCGQSGHIARDC 156
>gi|119499962|ref|XP_001266738.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
gi|119414903|gb|EAW24841.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
Length = 491
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C NC+ GH AR+CT R + C NCG PEH A DCP N +
Sbjct: 306 VKCVNCNASGHRARDCTEPRV------DRFACRNCGSPEHKAADCP------NPRSAEGV 353
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C +C GH A+DC C NCG H+ARDC +C NC + GH
Sbjct: 354 ECKRCNEMGHFAKDC----PQAPAPRTCRNCGSEDHMARDCDKPRDVSTVTCRNCEEVGH 409
Query: 249 FARECTK 255
F+R+C +
Sbjct: 410 FSRDCPQ 416
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NC +GH AR C R + + C NC H ARDC + + C
Sbjct: 281 CSNCGEMGHTARGCKEER--ALVDRVEVKCVNCNASGHRARDCTEPRV-------DRFAC 331
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
CG H A DC S G C C + GH A+DC A +C NCG H A
Sbjct: 332 RNCGSPEHKAADCPNPRSAEGV--ECKRCNEMGHFAKDCPQAPAPR--TCRNCGSEDHMA 387
Query: 251 RECTK 255
R+C K
Sbjct: 388 RDCDK 392
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ +GH A++C C NCG +H ARDC + + S +
Sbjct: 352 GVECKRCNEMGHFAKDCPQ-------APAPRTCRNCGSEDHMARDCDKPRDVS------T 398
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C C GH +RDC + +C NCG+ GH+ + C + G
Sbjct: 399 VTCRNCEEVGHFSRDCPQKKD--WSKVKCNNCGEMGHIIKRCPQAASESFG 447
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
Y+ C NCG+ H AR C ++ + C C GH ARDC
Sbjct: 274 YDRQIPKCSNCGEMGHTARGCKEERALVDRV---EVKCVNCNASGHRARDCTEPRVDRFA 330
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
C NCG H A DC + G C C + GHFA++C +
Sbjct: 331 ---CRNCGSPEHKAADCPNPRSAEGVECKRCNEMGHFAKDCPQA 371
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
N C NCG HFAR+CP + G CF CG GH +C G
Sbjct: 63 NDNKCRNCGGDSHFARECPEPRKGM--------ACFNCGEEGHSKAECTKPRVFKGP--- 111
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C K GH A +C C NC GH ECT+
Sbjct: 112 CRICSKEGHPAAECPDRPP---DVCKNCQSEGHKTIECTE 148
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C NC H+AR+C R S C NC + HF+RDCP+++ S
Sbjct: 371 APAPRTCRNCGSEDHMARDCDKPRDVSTVT-----CRNCEEVGHFSRDCPQKKDWSKVKC 425
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGG 212
NN CG GH+ + C S G
Sbjct: 426 NN------CGEMGHIIKRCPQAASESFG 447
>gi|365758739|gb|EHN00566.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 21/126 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GHV EC R C+NC H +R+CP + + + C
Sbjct: 49 CYNCGETGHVRSECAVQR-----------CFNCNQTGHISRECPEPKKATRF---SKVSC 94
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+KCGG H+A+DC+ G G +CY CG++GH++RDC C+NC + GH +
Sbjct: 95 YKCGGPNHMAKDCM--KEDGASGLKCYTCGQAGHMSRDCQ-----NDRLCYNCNETGHIS 147
Query: 251 RECTKV 256
++C+KV
Sbjct: 148 KDCSKV 153
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 23/136 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSG 188
CY C +GH+A +C S R CYNC P H DC PR YN
Sbjct: 6 CYVCGKIGHLAEDCDSERL----------CYNCNKPGHVQTDCTMPRTVEFKQCYNCGET 55
Query: 189 G----------CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G CF C GH++R+C + + CY CG H+A+DC G
Sbjct: 56 GHVRSECAVQRCFNCNQTGHISRECPEPKKATRFSKVSCYKCGGPNHMAKDCMKEDGASG 115
Query: 238 GSCFNCGKPGHFAREC 253
C+ CG+ GH +R+C
Sbjct: 116 LKCYTCGQAGHMSRDC 131
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CGK GHLA DC + C+NC KPGH +CT
Sbjct: 6 CYVCGKIGHLAEDCDSERL-----CYNCNKPGHVQTDCT 39
>gi|67602636|ref|XP_666494.1| glycogen debranching enzyme [Cryptosporidium hominis TU502]
gi|54657499|gb|EAL36263.1| glycogen debranching enzyme [Cryptosporidium hominis]
Length = 127
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 52/66 (78%)
Query: 13 WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVTA 72
WFD KG+GFI PDDG D+FVHQ++IK +G+R+L +++ VE++++ + G+ +A++V+
Sbjct: 9 WFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAVNVSG 68
Query: 73 PGGAPV 78
P GAPV
Sbjct: 69 PNGAPV 74
>gi|407695811|ref|YP_006820599.1| Cold shock-like protein CspD [Alcanivorax dieselolei B5]
gi|407253149|gb|AFT70256.1| Cold shock-like protein CspD [Alcanivorax dieselolei B5]
Length = 90
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+TG V WF+ AKGYGF+RPD+GG DLFVH I+ GY+TLY QSVE+++ LEA Y
Sbjct: 1 MATGTVKWFNNAKGYGFVRPDEGGDDLFVHYSYIQEKGYKTLYTGQSVEYEL-LEASKGY 59
Query: 66 QALDVTAPGGAP 77
A+++ PG P
Sbjct: 60 HAVNL-KPGAVP 70
>gi|302829474|ref|XP_002946304.1| nucleic acid binding protein [Volvox carteri f. nagariensis]
gi|121077603|gb|ABM47305.1| nucleic acid binding protein [Volvox carteri f. nagariensis]
gi|300269119|gb|EFJ53299.1| nucleic acid binding protein [Volvox carteri f. nagariensis]
Length = 242
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
M + R G V WF+ KG+GFI P+ GG D FVHQ +I SDG+R+L E ++VEF+V+
Sbjct: 1 MGEQLRQRGTVKWFNATKGFGFITPEGGGEDFFVHQTNINSDGFRSLREGEAVEFEVEAG 60
Query: 61 ADGKYQALDVTAPGG-APVHSSKN 83
DG+ +A+ V+ PGG AP + +N
Sbjct: 61 PDGRSKAVSVSGPGGSAPEGAPRN 84
>gi|322695117|gb|EFY86931.1| hypothetical protein MAC_07048 [Metarhizium acridum CQMa 102]
Length = 156
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C GH++REC S CY CG+ H AR+C + G G
Sbjct: 32 CYKCGQPGHISRECPLGGAGGASGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGG 91
Query: 190 ------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+ CGGYGH++R+C+ G +CYNCG+SGH +RDC +GG C+ C
Sbjct: 92 GGAGKTCYSCGGYGHMSRECVN-------GMKCYNCGESGHYSRDCPKESSGGEKICYKC 144
Query: 244 GKPGHFAREC 253
+ GH C
Sbjct: 145 QQAGHVQSAC 154
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 23/138 (16%)
Query: 132 YNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCF 191
YNC G GH++R+C+ + + CY CG P H +R+CP G S S C+
Sbjct: 10 YNCGGEGHMSRDCSEPMKENK------SCYKCGQPGHISRECPLGGAGGAS-GAQSTECY 62
Query: 192 KCGGYGHLARDC-----------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
KCG GH+AR+C GGG G CY+CG GH++R+C G C
Sbjct: 63 KCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECV-----NGMKC 117
Query: 241 FNCGKPGHFARECTKVAN 258
+NCG+ GH++R+C K ++
Sbjct: 118 YNCGESGHYSRDCPKESS 135
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH++REC N CYNCG+ H++RDCP++ G
Sbjct: 97 TCYSCGGYGHMSRECV----------NGMKCYNCGESGHYSRDCPKESSGGEKI------ 140
Query: 190 CFKCGGYGHLARDC 203
C+KC GH+ C
Sbjct: 141 CYKCQQAGHVQSAC 154
>gi|238504168|ref|XP_002383316.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
gi|220690787|gb|EED47136.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
Length = 482
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C NC VGH AR+CT RR + C NCG EH A +CP N +
Sbjct: 295 VKCVNCSAVGHRARDCTEPRR------DRFACRNCGSSEHKAAECP------NPRSAEGV 342
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C +C GH A+DC C NCG H+ARDC +C NC + GH
Sbjct: 343 ECKRCNEVGHFAKDC----PQAPAPRTCRNCGSEDHIARDCDKPRDISTVTCRNCDEVGH 398
Query: 249 FARECTK 255
F+R+C K
Sbjct: 399 FSRDCPK 405
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ VGH A++C C NCG +H ARDC + + S +
Sbjct: 341 GVECKRCNEVGHFAKDCPQAPAPRT-------CRNCGSEDHIARDCDKPRDIS------T 387
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C C GH +RDC + +C NCG+ GH + C + G
Sbjct: 388 VTCRNCDEVGHFSRDCPKKKD--WSKVKCNNCGEMGHTVKRCPSAVVNDTG 436
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
Y+ C NCG+ H AR C + + C C GH ARDC
Sbjct: 263 YDREIPKCSNCGEMGHTARGCKEEHV---VHERVEVKCVNCSAVGHRARDCTEPRRDRFA 319
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
C NCG S H A +C + G C C + GHFA++C +
Sbjct: 320 ---CRNCGSSEHKAAECPNPRSAEGVECKRCNEVGHFAKDCPQA 360
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C NC H+AR+C R S C NC + HF+RDCP+++ S
Sbjct: 360 APAPRTCRNCGSEDHIARDCDKPRDISTVT-----CRNCDEVGHFSRDCPKKKDWSKVKC 414
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
NN CG GH + C + G G
Sbjct: 415 NN------CGEMGHTVKRCPSAVVNDTGMG 438
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
N N N G FK G+G A + + G+ +C NCG GH AR+C G +C
Sbjct: 23 NDENANPSGNFKDDGFGGNAWENTSAGNEQNDDNKCRNCGSDGHFARNCPE--PRKGMAC 80
Query: 241 FNCGKPGHFARECTK 255
FNCG+ G ECTK
Sbjct: 81 FNCGEEGKA--ECTK 93
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGH 224
PE + R + Y+ C CG GH AR C +C NC GH
Sbjct: 246 PESVEENLERLEDAGIPYDREIPKCSNCGEMGHTARGCKEEHVVHERVEVKCVNCSAVGH 305
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFAREC 253
ARDC +C NCG H A EC
Sbjct: 306 RARDC-TEPRRDRFACRNCGSSEHKAAEC 333
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 18/91 (19%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN-------------NNSGGCFKCGGYGH 198
N N+ C NCG HFAR+CP + G +N G C C GH
Sbjct: 50 NEQNDDNKCRNCGSDGHFARNCPEPRKGMACFNCGEEGKAECTKPRVFKGTCRVCNQEGH 109
Query: 199 LARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
A C R C NC GH DC
Sbjct: 110 PASQCPERPPDV-----CKNCKMEGHRTIDC 135
>gi|66359918|ref|XP_627137.1| cold shock RNA binding domain of the OB fold [Cryptosporidium
parvum Iowa II]
gi|46228824|gb|EAK89694.1| cold shock RNA binding domain of the OB fold [Cryptosporidium
parvum Iowa II]
Length = 135
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 52/66 (78%)
Query: 13 WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVTA 72
WFD KG+GFI PDDG D+FVHQ++IK +G+R+L +++ VE++++ + G+ +A++V+
Sbjct: 17 WFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAVNVSG 76
Query: 73 PGGAPV 78
P GAPV
Sbjct: 77 PNGAPV 82
>gi|156065913|ref|XP_001598878.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980]
gi|154691826|gb|EDN91564.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 394
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 64/149 (42%), Gaps = 34/149 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN----- 185
CY+C G+GHV +C + R + +G CYNCG P H AR CP G
Sbjct: 222 CYHCQGLGHVQADCPTLRISGA--GTTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAP 279
Query: 186 ------------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
C+KCGG H ARDC +CY CGK GH +R
Sbjct: 280 RGGFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDC------QASAVKCYACGKIGHTSR 333
Query: 228 DCGAGGAG---GGGSCFNCGKPGHFAREC 253
DC + G G C+ CG GH AR+C
Sbjct: 334 DCSSPNGGVNKAGKICYTCGTEGHVARDC 362
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 64/157 (40%), Gaps = 48/157 (30%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C VGH A C S R CYN G H + CP + + C
Sbjct: 181 CYKCGNVGHYAEVCASAER---------LCYNLG---HESNGCPLPR------TTEAKQC 222
Query: 191 FKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC-----GAGGAGGG------- 237
+ C G GH+ DC T R SG G GRCYNCG GHLAR C G GA G
Sbjct: 223 YHCQGLGHVQADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAPRGG 282
Query: 238 -----------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 283 FGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQASA 319
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP CY C G H AR+C ++ + CY CG H +RDC GG N
Sbjct: 296 GPRPATCYKCGGPNHFARDCQAS---------AVKCYACGKIGHTSRDCSSPNGG---VN 343
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
C+ CG GH+ARDC ++G G G
Sbjct: 344 KAGKICYTCGTEGHVARDCPSKGLNVDGEG 373
>gi|402077536|gb|EJT72885.1| zinc finger protein GIS2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 259
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 70/150 (46%), Gaps = 33/150 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-------------- 176
CY+C G+GHV +C + R + G CYNCG P H AR CP
Sbjct: 85 CYHCQGLGHVQADCPTLRLSGA--GAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRG 142
Query: 177 -------QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
Q G + C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 143 GFTGGFPQRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDC 196
Query: 230 GAGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 197 TAPNGGPLNTAGKTCYQCGEAGHISRDCPQ 226
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 68/156 (43%), Gaps = 43/156 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 40 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 84
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG------------------ 230
C+ C G GH+ DC T R SG G GGRCYNCG+ GHLAR C
Sbjct: 85 CYHCQGLGHVQADCPTLRLSGAGAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRGGF 144
Query: 231 ------AGGAGGG---GSCFNCGKPGHFARECTKVA 257
GG GG +C+ CG P HFAR+C A
Sbjct: 145 TGGFPQRGGFAGGPRPATCYKCGGPNHFARDCQAQA 180
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 62/147 (42%), Gaps = 39/147 (26%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNN------------ 155
G+ + + + R +G G G CYNC GH+AR C N +N
Sbjct: 92 GHVQADCPTLRLSGAG---AGGRCYNCGQPGHLARAC-PNPAGANMGRGAPVPRGGFTGG 147
Query: 156 -----------NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI 204
CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 148 FPQRGGFAGGPRPATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCT 197
Query: 205 TR--GSGGGGGGRCYNCGKSGHLARDC 229
G G CY CG++GH++RDC
Sbjct: 198 APNGGPLNTAGKTCYQCGEAGHISRDC 224
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCPRQ 176
+ CY C +GH++R+CT+ N N +G CY CG+ H +RDCP++
Sbjct: 180 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYQCGEAGHISRDCPQK 227
>gi|119177704|ref|XP_001240597.1| hypothetical protein CIMG_07760 [Coccidioides immitis RS]
gi|303315823|ref|XP_003067916.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107592|gb|EER25771.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320032012|gb|EFW13968.1| zinc knuckle nucleic acid binding protein [Coccidioides posadasii
str. Silveira]
gi|392867438|gb|EAS29333.2| zinc knuckle nucleic acid binding protein [Coccidioides immitis RS]
Length = 236
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 71/146 (48%), Gaps = 31/146 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--------PRQQGGSNS 182
CY+C G+GHV +C + R N SG CYNC P H AR+C PR GG+
Sbjct: 52 CYHCQGLGHVQADCPTLRLNGG--ATSGRCYNCNLPGHLARNCHNAGMQGAPRNVGGARG 109
Query: 183 YNN-----------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
N + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 110 GFNAPFRGGYGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 163
Query: 232 GGAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 164 PNGGPLSSAGKVCYKCSQAGHISRDC 189
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 69/154 (44%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S+ R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSSERL---------CYNCKQPGHESNGCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC----------GAGGAGGG- 237
C+ C G GH+ DC T R +GG GRCYNC GHLAR+C GGA GG
Sbjct: 52 CYHCQGLGHVQADCPTLRLNGGATSGRCYNCNLPGHLARNCHNAGMQGAPRNVGGARGGF 111
Query: 238 --------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 112 NAPFRGGYGGYPRAATCYKCGGPNHFARDCQAQA 145
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 62/145 (42%), Gaps = 37/145 (25%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-------- 159
G+ + + + R NGG CYNC+ GH+AR C N N GG
Sbjct: 59 GHVQADCPTLRLNGGA---TSGRCYNCNLPGHLARNC-HNAGMQGAPRNVGGARGGFNAP 114
Query: 160 -------------CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR 206
CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 115 FRGGYGGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCTAP 164
Query: 207 --GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 165 NGGPLSSAGKVCYKCSQAGHISRDC 189
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 59/146 (40%), Gaps = 16/146 (10%)
Query: 58 QLEADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSR 117
++AD L+ GGA N N + N + G G GG G N
Sbjct: 60 HVQADCPTLRLN----GGATSGRCYNCNLPGHLARNCHNAGMQGAPRNVGGARGGFNAPF 115
Query: 118 RNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
R GGY P CY C G H AR+C + + CY CG H +RDC
Sbjct: 116 RGGYGGY-PRAATCYKCGGPNHFARDCQAQ---------AMKCYACGKLGHISRDCTAPN 165
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDC 203
GG S C+KC GH++RDC
Sbjct: 166 GGPLSSAGKV--CYKCSQAGHISRDC 189
>gi|121708529|ref|XP_001272160.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
gi|119400308|gb|EAW10734.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
Length = 488
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 60/127 (47%), Gaps = 16/127 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C NC+ GH AR+C RR+ C NCG P+H A DCP N +
Sbjct: 304 VKCVNCNASGHRARDCPEVRRDRY------ACRNCGAPDHKAADCP------NPRSAEGV 351
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C +C GH A+DC C NCG H+ARDC +C NC + GH
Sbjct: 352 ECKRCNEVGHFAKDC----PQAPPPRTCRNCGSEDHIARDCDKPRDVSTVTCRNCDEVGH 407
Query: 249 FARECTK 255
F+R+CTK
Sbjct: 408 FSRDCTK 414
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ VGH A++C C NCG +H ARDC + + S +
Sbjct: 350 GVECKRCNEVGHFAKDCPQ-------APPPRTCRNCGSEDHIARDCDKPRDVS------T 396
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C C GH +RDC + +C NCG+ GH + C
Sbjct: 397 VTCRNCDEVGHFSRDCTKKKD--WSKVKCNNCGEMGHTIKRC 436
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC--ITRGSGG 210
Y+ C NCG+ H AR C ++ C C GH ARDC + R
Sbjct: 272 YDRQIPKCSNCGEMGHTARGCKEERALIERV---EVKCVNCNASGHRARDCPEVRRDRYA 328
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C NCG H A DC + G C C + GHFA++C +
Sbjct: 329 -----CRNCGAPDHKAADCPNPRSAEGVECKRCNEVGHFAKDCPQAP 370
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
N C NCG+ HFAR+CP + G CF CG GH +C G
Sbjct: 61 NDNKCRNCGNESHFARECPEPRKGM--------ACFNCGEEGHSKAECTKPRVFKGS--- 109
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C K GH A +C C NC GH ECT+
Sbjct: 110 CRICNKEGHPAAECPDRPP---DVCKNCQSEGHRTIECTE 146
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
R + Y+ C CG GH AR C R +C NC SGH ARDC
Sbjct: 264 RLEDAGFPYDRQIPKCSNCGEMGHTARGCKEERALIERVEVKCVNCNASGHRARDC-PEV 322
Query: 234 AGGGGSCFNCGKPGHFARECT 254
+C NCG P H A +C
Sbjct: 323 RRDRYACRNCGAPDHKAADCP 343
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG-----GSNSY 183
V C NCD VGH +R+CT + S C NCG+ H + CP+ +N+Y
Sbjct: 397 VTCRNCDEVGHFSRDCTKKKDWSKVK-----CNNCGEMGHTIKRCPQATSDDLGQSNNNY 451
Query: 184 NNNSGG 189
+N+ G
Sbjct: 452 QDNASG 457
>gi|50422497|ref|XP_459816.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
gi|49655484|emb|CAG88055.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
Length = 172
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----- 184
+CYNC GH + +C + ++ + CY+CGD H DCP Q G+ YN
Sbjct: 28 LCYNCRQPGHESNDCPAPKQATQKQ-----CYSCGDLGHVQSDCPTQSQGAKCYNCGQFG 82
Query: 185 -----------------------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGK 221
+ C+KCGG H ARDC G +CY CGK
Sbjct: 83 HISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHYARDC------QAGVVKCYACGK 136
Query: 222 SGHLARDC--GAGGAGGGGSCFNCGKPGHFAREC 253
+GH+++DC +GG +C+NCGK GH ++EC
Sbjct: 137 TGHISKDCNSASGGEFTSKTCYNCGKSGHISKEC 170
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 128 GVVCYNCDGVGHVARECTS-------NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
G CYNC GH+++ CT +S + CY CG P H+ARDC Q G
Sbjct: 72 GAKCYNCGQFGHISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHYARDC---QAGV 128
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ CG GH+++DC + G CYNCGKSGH++++C
Sbjct: 129 VK-------CYACGKTGHISKDCNSASGGEFTSKTCYNCGKSGHISKEC 170
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA +C CYNC + GH + DC A C++CG GH
Sbjct: 9 CYKCGEAGHLADNCQQEQR------LCYNCRQPGHESNDCPAPKQATQKQCYSCGDLGHV 62
Query: 250 AREC 253
+C
Sbjct: 63 QSDC 66
>gi|449664234|ref|XP_002161873.2| PREDICTED: probable ATP-dependent RNA helicase DDX4 [Hydra
magnipapillata]
Length = 815
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 20/127 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
C+ C GH++REC + C+ C H +RDCP QGGS GG
Sbjct: 72 CHKCGKEGHMSRECP----DGGGGGGGRACFKCKQEGHMSRDCP--QGGS-------GGG 118
Query: 190 --CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-SCFNCGKP 246
C KCG GH++R+C GGGGG C+ C + GH+++DC GG GGG +C CGK
Sbjct: 119 RACHKCGKEGHMSREC---PDGGGGGRACFKCKQEGHMSKDCPQGGGGGGSRTCHKCGKE 175
Query: 247 GHFAREC 253
GH +REC
Sbjct: 176 GHMSREC 182
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CY 217
C+ CG H +R+CP CFKC GH++RDC GG GGGR C+
Sbjct: 71 ACHKCGKEGHMSRECP-----DGGGGGGGRACFKCKQEGHMSRDC---PQGGSGGGRACH 122
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CGK GH++R+C GG GGG +CF C + GH +++C +
Sbjct: 123 KCGKEGHMSRECPDGG-GGGRACFKCKQEGHMSKDCPQ 159
>gi|357619173|gb|EHJ71850.1| zinc finger protein [Danaus plexippus]
Length = 144
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 18/128 (14%)
Query: 130 VCYNCDGVGHVARECTSN---RRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
VCY C+ GH ARECT + ++ +N C+ C HFARDC +
Sbjct: 5 VCYKCNRKGHFARECTQSGVGALDAGFNRQREKCFKCNRTGHFARDCKEE---------- 54
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-SCFNCGK 245
+ C++C G GH+AR+C + CYNC K+GH+AR+C GG +C+NC K
Sbjct: 55 ADRCYRCNGTGHIAREC----AQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNK 110
Query: 246 PGHFAREC 253
GH +R C
Sbjct: 111 TGHISRNC 118
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGG------RCYNCGKSGHLARDCGAGGAGGGGSC 240
S C+KC GH AR+C G G G +C+ C ++GH ARDC C
Sbjct: 3 SSVCYKCNRKGHFARECTQSGVGALDAGFNRQREKCFKCNRTGHFARDCKE----EADRC 58
Query: 241 FNCGKPGHFARECTK 255
+ C GH AREC +
Sbjct: 59 YRCNGTGHIARECAQ 73
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS--------CFNCGKPGHFARECTKVAN 258
CY C + GH AR+C G G + CF C + GHFAR+C + A+
Sbjct: 6 CYKCNRKGHFARECTQSGVGALDAGFNRQREKCFKCNRTGHFARDCKEEAD 56
>gi|323331856|gb|EGA73268.1| Gis2p [Saccharomyces cerevisiae AWRI796]
gi|323346793|gb|EGA81072.1| Gis2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352848|gb|EGA85150.1| Gis2p [Saccharomyces cerevisiae VL3]
Length = 114
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 21/125 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GHV ECT R C+NC H +R+CP + S + C
Sbjct: 10 CYNCGETGHVRSECTVQR-----------CFNCNQTGHISRECPEPKKTSRF---SKVSC 55
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+KCGG H+A+DC+ G G +CY CG++GH++RDC C+NC + GH +
Sbjct: 56 YKCGGPNHMAKDCM--KEDGISGLKCYTCGQAGHMSRDC-----QNDRLCYNCNETGHIS 108
Query: 251 RECTK 255
++C K
Sbjct: 109 KDCPK 113
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+CYNCG++GH+ +C CFNC + GH +REC +
Sbjct: 9 QCYNCGETGHVRSECTV------QRCFNCNQTGHISRECPE 43
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
G G+ CY C GH++R+C ++R CYNC + H ++DCP+
Sbjct: 73 GISGLKCYTCGQAGHMSRDCQNDRL----------CYNCNETGHISKDCPK 113
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CY C G H+A++C S CY CG H +RDC N
Sbjct: 53 VSCYKCGGPNHMAKDCMKEDGISGLK-----CYTCGQAGHMSRDC-----------QNDR 96
Query: 189 GCFKCGGYGHLARDC 203
C+ C GH+++DC
Sbjct: 97 LCYNCNETGHISKDC 111
>gi|410988851|ref|XP_004000690.1| PREDICTED: cellular nucleic acid-binding protein-like [Felis catus]
Length = 171
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R CY CG P H ARDC RQ+
Sbjct: 67 ICYNCGRSGHIAKDCIEPKRE-----REQCCYTCGRPGHLARDCDRQE---------EQK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG YGH+ +DC +CY CG+ GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGEYGHIQKDCTQ--------VKCYRCGEIGHMAINCSKTSE---VNCYRCGESGHL 161
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 162 ARECPTEAT 170
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 160 CYNCGDPEHFARDCPR------------QQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
C+ CG H+AR CPR +G S N S C++CG GH A++C
Sbjct: 6 CFKCGRSGHWARGCPRGGGSQGHGARGRVRGSQCSSTNPSDICYRCGESGHHAKNCDLLE 65
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCG+SGH+A+DC C+ CG+PGH AR+C +
Sbjct: 66 DI------CYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDCDR 107
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
N S CY CG+ H A++C + C+ CG GH+A+DCI
Sbjct: 42 TNPSDICYRCGESGHHAKNC----------DLLEDICYNCGRSGHIAKDCIEPKREREQC 91
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CY CG+ GHLARDC C++CG+ GH ++CT+V
Sbjct: 92 --CYTCGRPGHLARDCDRQEEQ---KCYSCGEYGHIQKDCTQV 129
>gi|119496265|ref|XP_001264906.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
gi|119413068|gb|EAW23009.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
Length = 170
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPR-----Q 176
P CY C GH++REC+ NYN G CY CG H AR+C +
Sbjct: 40 APKEKSCYRCGVAGHISRECSQAGSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGG 99
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
G Y C+ CGG+GH+ARDC G +CYNCG GH++RDC A G
Sbjct: 100 GFGHGGYGGRQQTCYSCGGFGHMARDCTH-------GQKCYNCGDVGHVSRDCPT-EAKG 151
Query: 237 GGSCFNCGKPGHFAREC 253
C+ C +PGH C
Sbjct: 152 ERVCYKCKQPGHVQAAC 168
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 70/135 (51%), Gaps = 25/135 (18%)
Query: 136 GVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---CFK 192
G GHV+RECT + + CY CG H +R+C Q G ++YN G C+K
Sbjct: 29 GQGHVSRECTVAPKEKS-------CYRCGVAGHISREC-SQAGSGDNYNGAPSGGQECYK 80
Query: 193 CGGYGHLARDCITRGSGGGGGGR---------CYNCGKSGHLARDCGAGGAGGGGSCFNC 243
CG GH+AR+C G+ GGG G CY+CG GH+ARDC G C+NC
Sbjct: 81 CGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDC-----THGQKCYNC 135
Query: 244 GKPGHFARECTKVAN 258
G GH +R+C A
Sbjct: 136 GDVGHVSRDCPTEAK 150
>gi|448531555|ref|XP_003870274.1| Gis2 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354628|emb|CCG24144.1| Gis2 transcription factor [Candida orthopsilosis]
Length = 177
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 74/160 (46%), Gaps = 46/160 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH + +C ++ + S CY+CGD H +CP Q G+ YN G
Sbjct: 28 LCYNCRKPGHESGDCPEPKQTT-----SKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFG 82
Query: 190 --------------------------------CFKCGGYGHLARDCITRGSGGGGGGRCY 217
C+KCGG H ARDC G +CY
Sbjct: 83 HISKNCDQAPTGQAPPFKKSYGPRGGSASGTTCYKCGGPNHFARDCQ------AGNTKCY 136
Query: 218 NCGKSGHLARDC--GAGGA-GGGGSCFNCGKPGHFARECT 254
CGK GH+++DC AGG+ G +C+NCGK GH +RECT
Sbjct: 137 ACGKPGHISKDCHSAAGGSNAGSKTCYNCGKSGHISRECT 176
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 22/116 (18%)
Query: 128 GVVCYNCDGVGHVAREC------TSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQ 176
G CYNC GH+++ C + +Y G CY CG P HFARDC
Sbjct: 72 GAKCYNCGQFGHISKNCDQAPTGQAPPFKKSYGPRGGSASGTTCYKCGGPNHFARDC--- 128
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA 231
Q G+ C+ CG GH+++DC + G G + CYNCGKSGH++R+C A
Sbjct: 129 QAGNTK-------CYACGKPGHISKDCHSAAGGSNAGSKTCYNCGKSGHISRECTA 177
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 124 YGP-----GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
YGP G CY C G H AR+C + CY CG P H ++DC G
Sbjct: 103 YGPRGGSASGTTCYKCGGPNHFARDCQAGNTK---------CYACGKPGHISKDCHSAAG 153
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCI 204
GSN+ S C+ CG GH++R+C
Sbjct: 154 GSNA---GSKTCYNCGKSGHISRECT 176
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH+A DC CYNC K GH + DC C++CG GH
Sbjct: 9 CYKCGEAGHVADDCTQEER------LCYNCRKPGHESGDCPEPKQTTSKQCYSCGDVGHI 62
Query: 250 ARECTKVAN 258
EC A
Sbjct: 63 QTECPNQAQ 71
>gi|125602073|gb|EAZ41398.1| hypothetical protein OsJ_25919 [Oryza sativa Japonica Group]
Length = 91
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDDGG DLFVHQ S+KSDGYR+L + VEF V DG+
Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64
Query: 66 QALDVTAPGGAPV 78
+A+D GG PV
Sbjct: 65 KAVD----GGIPV 73
>gi|358395603|gb|EHK44990.1| hypothetical protein TRIATDRAFT_166172, partial [Trichoderma
atroviride IMI 206040]
Length = 404
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 116 SRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
SR +N G G+ CYNC + H ++ CT R CYNCG+ H RDCP
Sbjct: 221 SRLDNAGIVVDRGLPKCYNCSELSHTSKACTQERVEHASEKPKISCYNCGNEGHRVRDCP 280
Query: 175 RQQGGS-----------------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
+ N ++ C KC GH A+DC GG C
Sbjct: 281 EPRVDKFACKNCGKSGHKIAECPEPPNMDNVECRKCNKTGHFAKDC-----PDGGSRACR 335
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
NCG+ GH+++DC +C NC + GH+++EC K
Sbjct: 336 NCGQEGHISKDCDQPRNMDLVTCRNCEETGHYSKECPK 373
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CF CG GH +C C C K GH+ +DC +C NCG+ GHF
Sbjct: 46 CFGCGEEGHRRAEC-----PNAEAQTCRYCKKEGHMVKDCPDKPPM---TCGNCGEEGHF 97
Query: 250 AREC 253
++C
Sbjct: 98 RKDC 101
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC GH++++C R N + C NC + H++++CP+ + S
Sbjct: 330 GSRACRNCGQEGHISKDCDQPR-----NMDLVTCRNCEETGHYSKECPKPRDWSKVQ--- 381
Query: 187 SGGCFKCGGYGHLARDC 203
C C YGH C
Sbjct: 382 ---CTNCEEYGHTKVRC 395
>gi|148666814|gb|EDK99230.1| cellular nucleic acid binding protein, isoform CRA_c [Mus musculus]
Length = 149
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 25/130 (19%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 44 VTCYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQ 89
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 90 KCYSCGEFGHIQKDC--------TKVKCYRCGETGHVAINCSKTSEV---NCYRCGESGH 138
Query: 249 FARECTKVAN 258
ARECT A
Sbjct: 139 LARECTIEAT 148
>gi|121702271|ref|XP_001269400.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
gi|119397543|gb|EAW07974.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
Length = 177
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 23/143 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + + CY CG H +R+CP+ G N +
Sbjct: 27 GTPTCYNCGGQGHVSRECTVAPKEKS-------CYRCGVAGHISRECPQSGAGDNYGGPS 79
Query: 187 SGG---CFKCGGYGHLARDCITRGSGGGGGG--------RCYNCGKSGHLARDCGAGGAG 235
+GG C+KCG GH+AR+C G+ GGG G CY+CG GH+ARDC
Sbjct: 80 TGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYSCGGFGHMARDCTQ---- 135
Query: 236 GGGSCFNCGKPGHFARECTKVAN 258
G C+NCG+ GH +R+C A
Sbjct: 136 -GQKCYNCGEVGHVSRDCPTEAK 157
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG----CYNCGDPEHFARDCPRQQGGSN 181
P CY C GH++REC + NY S G CY CG H AR+C +
Sbjct: 48 PKEKSCYRCGVAGHISRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGG 107
Query: 182 SYNNNSGG----CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
Y GG C+ CGG+GH+ARDC G +CYNCG+ GH++RDC A G
Sbjct: 108 GYGGGFGGRQQTCYSCGGFGHMARDCTQ-------GQKCYNCGEVGHVSRDCPT-EAKGE 159
Query: 238 GSCFNCGKPGHFAREC 253
C+ C +PGH C
Sbjct: 160 RVCYKCKQPGHVQAAC 175
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 32/135 (23%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
+Y GC+NCGD H ARDCP++ G YN C++CG G
Sbjct: 2 DYQAGGRGCFNCGDASHQARDCPKK-GTPTCYNCGGQGHVSRECTVAPKEKSCYRCGVAG 60
Query: 198 HLARDCITRGSG-------GGGGGRCYNCGKSGHLARDCGAGGAGGGG----------SC 240
H++R+C G+G GGG CY CG+ GH+AR+C GG GGG +C
Sbjct: 61 HISRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTC 120
Query: 241 FNCGKPGHFARECTK 255
++CG GH AR+CT+
Sbjct: 121 YSCGGFGHMARDCTQ 135
>gi|297263145|ref|XP_001093980.2| PREDICTED: hypothetical protein LOC705622 [Macaca mulatta]
Length = 343
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH+A++C +R CYNCG P H ARDC + + C
Sbjct: 240 CYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDC---------DHADEQKC 285
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CG +GH+ +DC +CY CG++GH+A +C C+ CG+ GH A
Sbjct: 286 YSCGEFGHIQKDCT--------KVKCYRCGETGHVAINCSKTSEVN---CYRCGESGHLA 334
Query: 251 RECTKVAN 258
RECT A
Sbjct: 335 RECTIEAT 342
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 146 SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ--------------QGGSNSYNNNSGGCF 191
S+ + +S C+ CG H+AR+CP Q S+S + C+
Sbjct: 165 SDAEDLTAAMSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI---CY 221
Query: 192 KCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAR 251
+CG GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR
Sbjct: 222 RCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 275
Query: 252 EC 253
+C
Sbjct: 276 DC 277
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNY------------NNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + ++ CY CG+ H A+DC Q+
Sbjct: 179 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 238
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 239 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 283
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 284 KCYSCGEFGHIQKDCTKV 301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC
Sbjct: 219 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDC------KEPKREREQC 263
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 264 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCT------KVKCYRCGETGHV 312
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 313 AINCSKTSE 321
>gi|397631500|gb|EJK70178.1| hypothetical protein THAOC_08484 [Thalassiosira oceanica]
Length = 120
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQL-EADGKY 65
STG V WFD KGYGFI PDDG D+FVHQ +I +G+R+L +++ VEF +++ + GK
Sbjct: 35 STGSVKWFDSEKGYGFIVPDDGSDDVFVHQTNINVEGFRSLADDEQVEFRIEVDDRTGKR 94
Query: 66 QALDVTAPGGAPV 78
+A DVT P GA V
Sbjct: 95 KATDVTGPDGADV 107
>gi|338729303|ref|XP_001505024.3| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 170
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++CT +R CY CG H ARDC RQ+
Sbjct: 66 ICYNCGRSGHIAKDCTEPKRE-----REQCCYTCGRRGHLARDCDRQE---------QQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH +DC +CY CG++GH+A +C +C+ CGKPGH
Sbjct: 112 CYSCGELGHFQKDCTQ--------VKCYRCGETGHVAINCSKKNKV---NCYRCGKPGHL 160
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 161 ARECPTEAT 169
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 26/126 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH AR+C + CYNCG H A+DC +
Sbjct: 46 ICYRCGESGHHARDC---------HLLENICYNCGRSGHIAKDC------TEPKREREQC 90
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC + +CY+CG+ GH +DC C+ CG+ GH
Sbjct: 91 CYTCGRRGHLARDCDRQEQQ-----KCYSCGELGHFQKDCTQV------KCYRCGETGHV 139
Query: 250 ARECTK 255
A C+K
Sbjct: 140 AINCSK 145
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + C+ CG GH+A+DC CY C
Sbjct: 47 CYRCGESGHHARDC----------HLLENICYNCGRSGHIAKDCTEPKREREQC--CYTC 94
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
G+ GHLARDC C++CG+ GHF ++CT+V
Sbjct: 95 GRRGHLARDCDRQEQQ---KCYSCGELGHFQKDCTQV 128
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPR--------------QQGGSNSYNNNSGGCFKCGGYGHLAR 201
+S C+ G H+AR CPR QG S + + C++CG GH AR
Sbjct: 2 SSKDCFRGGRSGHWARGCPRGGARGRGARGRGRGSQGTSTTLPDI---CYRCGESGHHAR 58
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
DC + CYNCG+SGH+A+DC C+ CG+ GH AR+C +
Sbjct: 59 DCHLLENI------CYNCGRSGHIAKDCTEPKREREQCCYTCGRRGHLARDCDR 106
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
V CY C GHVA C+ N CY CG P H AR+CP +
Sbjct: 128 VKCYRCGETGHVAINCS--------KKNKVNCYRCGKPGHLARECPTE 167
>gi|401843026|gb|EJT44984.1| GIS2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 153
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 21/126 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GHV EC R C+NC H +++CP + + + C
Sbjct: 49 CYNCGETGHVRSECAVQR-----------CFNCNQTGHISKECPEPKKATRF---SKVSC 94
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+KCGG H+A+DC+ G G +CY CG++GH++RDC C+NC + GH +
Sbjct: 95 YKCGGPNHMAKDCMKED--GASGLKCYTCGQAGHMSRDCQ-----NDRLCYNCNETGHIS 147
Query: 251 RECTKV 256
++C+KV
Sbjct: 148 KDCSKV 153
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 59/136 (43%), Gaps = 23/136 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSG 188
CY C +GH+A +C S R CYNC P H DC PR YN
Sbjct: 6 CYVCGKIGHLAEDCDSERL----------CYNCNKPGHVQTDCTMPRTVEFKQCYNCGET 55
Query: 189 G----------CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G CF C GH++++C + + CY CG H+A+DC G
Sbjct: 56 GHVRSECAVQRCFNCNQTGHISKECPEPKKATRFSKVSCYKCGGPNHMAKDCMKEDGASG 115
Query: 238 GSCFNCGKPGHFAREC 253
C+ CG+ GH +R+C
Sbjct: 116 LKCYTCGQAGHMSRDC 131
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CGK GHLA DC + C+NC KPGH +CT
Sbjct: 6 CYVCGKIGHLAEDCDSERL-----CYNCNKPGHVQTDCT 39
>gi|330915670|ref|XP_003297115.1| hypothetical protein PTT_07428 [Pyrenophora teres f. teres 0-1]
gi|311330354|gb|EFQ94773.1| hypothetical protein PTT_07428 [Pyrenophora teres f. teres 0-1]
Length = 215
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 28/145 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-------------- 176
CY+C GVGHV +C + R + SG CY+CG H AR+CP
Sbjct: 53 CYHCQGVGHVQADCPTLRLSGA--GTSGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYG 110
Query: 177 --QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
G + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 GGFRGGFAGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAPNG 164
Query: 235 G----GGGSCFNCGKPGHFARECTK 255
G G +C+ CG+ GH +R+CT+
Sbjct: 165 GPLNTAGKTCYRCGETGHISRDCTQ 189
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 69/151 (45%), Gaps = 38/151 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACFKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPHPR------TTETKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG----------- 237
C+ C G GH+ DC T R SG G GRCY+CG +GHLAR+C + G G G
Sbjct: 53 CYHCQGVGHVQADCPTLRLSGAGTSGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYGGG 112
Query: 238 -----------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 FRGGFAGGARPATCYKCGGPNHFARDCQAQA 143
>gi|189197609|ref|XP_001935142.1| zinc knuckle domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981090|gb|EDU47716.1| zinc knuckle domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 215
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 28/145 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-------------- 176
CY+C GVGHV +C + R + SG CY+CG H AR+CP
Sbjct: 53 CYHCQGVGHVQADCPTLRLSGA--GTSGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYG 110
Query: 177 --QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
G + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 GGFRGGFAGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAPNG 164
Query: 235 G----GGGSCFNCGKPGHFARECTK 255
G G +C+ CG+ GH +R+CT+
Sbjct: 165 GPLNTAGKTCYRCGETGHISRDCTQ 189
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 69/151 (45%), Gaps = 38/151 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACFKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPHPR------TTETKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG----------- 237
C+ C G GH+ DC T R SG G GRCY+CG +GHLAR+C + G G G
Sbjct: 53 CYHCQGVGHVQADCPTLRLSGAGTSGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYGGG 112
Query: 238 -----------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 FRGGFAGGARPATCYKCGGPNHFARDCQAQA 143
>gi|171694395|ref|XP_001912122.1| hypothetical protein [Podospora anserina S mat+]
gi|170947146|emb|CAP73951.1| unnamed protein product [Podospora anserina S mat+]
Length = 479
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CYNCD VGH R+C + R + C NCG P H +CP +
Sbjct: 302 VKCYNCDEVGHRVRDCPTPRV------DKFACKNCGQPGHPVAECPEPRSAEGVE----- 350
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH ++DC + G G C NCG+ GH++++C C NC + GH
Sbjct: 351 -CRKCNETGHFSKDCPSAGPRG-----CRNCGQEGHMSKECTEPKNMDNVQCRNCDEMGH 404
Query: 249 FARECTKVAN 258
F++EC K +
Sbjct: 405 FSKECPKPPD 414
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 116 SRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
R + G GG+ C NCD +GH+++ C ++R + CYNC + H RDCP
Sbjct: 261 ERLADAGELVAGGLPKCRNCDQLGHISKHCKEDKRENERIQVK--CYNCDEVGHRVRDCP 318
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
+ + C CG GH +C S G C C ++GH ++DC + G
Sbjct: 319 -------TPRVDKFACKNCGQPGHPVAECPEPRSAEGV--ECRKCNETGHFSKDCPSAGP 369
Query: 235 GGGGSCFNCGKPGHFARECTKVAN 258
G C NCG+ GH ++ECT+ N
Sbjct: 370 RG---CRNCGQEGHMSKECTEPKN 390
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
G C +CG GH ++DC T G C CG + HL ++C G C NCG+ G
Sbjct: 85 GACRRCGDEGHYSKDCPT-----AGPMTCNACGSTEHLRKECPDAGP---MLCKNCGEEG 136
Query: 248 HFAREC 253
H C
Sbjct: 137 HTISAC 142
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ GH +++C S GC NCG H +++C + N ++
Sbjct: 348 GVECRKCNETGHFSKDCPS--------AGPRGCRNCGQEGHMSKEC------TEPKNMDN 393
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C C GH +++C C NC + GH C
Sbjct: 394 VQCRNCDEMGHFSKECPK--PPDWSRVECQNCHQKGHTKVRC 433
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 14/79 (17%)
Query: 151 SNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG 210
SN G C CGD H+++DCP C CG HL ++C
Sbjct: 78 SNPRKPLGACRRCGDEGHYSKDCP---------TAGPMTCNACGSTEHLRKEC-----PD 123
Query: 211 GGGGRCYNCGKSGHLARDC 229
G C NCG+ GH C
Sbjct: 124 AGPMLCKNCGEEGHTISAC 142
>gi|261199101|ref|XP_002625952.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239595104|gb|EEQ77685.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 226
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC------------PRQQG 178
CY+C G+GHV +C + R N SG CYNC P H AR+C P +G
Sbjct: 52 CYHCQGLGHVQADCPTLRINGG--ATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRG 109
Query: 179 GSNSYNN-------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G N + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 110 GFNPPFRGGFMGYPRAAMCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 163
Query: 232 GGAG----GGGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 164 PNGGPLSSAGKVCYKCSQAGHISRDC 189
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 65/154 (42%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSAERL---------CYNCKQPGHESNGCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------ 236
C+ C G GH+ DC T R +GG GRCYNC GHLAR+C + G G
Sbjct: 52 CYHCQGLGHVQADCPTLRINGGATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRGGF 111
Query: 237 -------------GGSCFNCGKPGHFARECTKVA 257
C+ CG P HFAR+C A
Sbjct: 112 NPPFRGGFMGYPRAAMCYKCGGPNHFARDCQAQA 145
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 83 NNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVAR 142
N N + N G G G G N R GY P +CY C G H AR
Sbjct: 81 NCNLPGHLARNCLSAGMQGAMRGAPAVRGGFNPPFRGGFMGY-PRAAMCYKCGGPNHFAR 139
Query: 143 ECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARD 202
+C + + CY CG H +RDC GG S C+KC GH++RD
Sbjct: 140 DCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSAGKV--CYKCSQAGHISRD 188
Query: 203 C 203
C
Sbjct: 189 C 189
>gi|224000015|ref|XP_002289680.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
gi|220974888|gb|EED93217.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
Length = 136
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 52/71 (73%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WFD KG+GF+ PDDG A++FVH +I ++G+R+L + + VEF+V E +GK++AL
Sbjct: 44 GTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKWKAL 103
Query: 69 DVTAPGGAPVH 79
+VT P G+ V
Sbjct: 104 NVTGPDGSFVQ 114
>gi|354544631|emb|CCE41356.1| hypothetical protein CPAR2_303450 [Candida parapsilosis]
Length = 180
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 29/140 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS-----NSYNN 185
CY+C VGH+ EC + + + CYNCG H ++DC + G S+
Sbjct: 53 CYSCGDVGHIQSECPNQAQGAK-------CYNCGQFGHISKDCDQPPSGQAPPFRKSFGG 105
Query: 186 NSGG--------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG-- 235
+ GG C+KCGG H ARDC G +CY CGK GH+++DC + G
Sbjct: 106 SRGGGHSASGTTCYKCGGPNHFARDC------QAGTVKCYACGKPGHISKDCHSAAGGSN 159
Query: 236 -GGGSCFNCGKPGHFARECT 254
+C+NCGK GH +RECT
Sbjct: 160 VAAKTCYNCGKSGHISRECT 179
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 67/160 (41%), Gaps = 44/160 (27%)
Query: 130 VCYNCDGVGHVARECTSNRR---------------NSNYNNNSGGCYNCGDPEHFARDCP 174
CY C GHVA +CT R S CY+CGD H +CP
Sbjct: 8 TCYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQATSKQCYSCGDVGHIQSECP 67
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSG-------------GGG----GGRCY 217
Q G+ YN CG +GH+++DC SG GGG G CY
Sbjct: 68 NQAQGAKCYN--------CGQFGHISKDCDQPPSGQAPPFRKSFGGSRGGGHSASGTTCY 119
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
CG H ARDC AG C+ CGKPGH +++C A
Sbjct: 120 KCGGPNHFARDCQAGTV----KCYACGKPGHISKDCHSAA 155
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 128 GVVCYNCDGVGHVARECTSNR--RNSNYNNNSGG------------CYNCGDPEHFARDC 173
G CYNC GH++++C + + + GG CY CG P HFARDC
Sbjct: 72 GAKCYNCGQFGHISKDCDQPPSGQAPPFRKSFGGSRGGGHSASGTTCYKCGGPNHFARDC 131
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA 231
Q G+ C+ CG GH+++DC + G + CYNCGKSGH++R+C A
Sbjct: 132 ---QAGTVK-------CYACGKPGHISKDCHSAAGGSNVAAKTCYNCGKSGHISRECTA 180
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
+ GGG+ G CY C G H AR+C + CY CG P H ++DC G
Sbjct: 106 SRGGGHSASGTTCYKCGGPNHFARDCQAGTVK---------CYACGKPGHISKDCHSAAG 156
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCIT 205
GSN C+ CG GH++R+C
Sbjct: 157 GSNVAAKT---CYNCGKSGHISRECTA 180
>gi|310796854|gb|EFQ32315.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 182
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNN-NSGGCYNCGDPEHFARDCPRQQGGSNSYNN---- 185
CY C GH++R+C +S CY CG+ H AR+CP+ GG
Sbjct: 48 CYRCGQAGHISRDCPQGGNVGGGGGPSSSECYKCGEVGHVARNCPKSGGGYGGGQGGYGG 107
Query: 186 -----------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
+ C+ CGGYGH++RDC G +CYNCG++GH +RDC +
Sbjct: 108 GYGGGGGYGGASQKTCYSCGGYGHMSRDCTN-------GSKCYNCGENGHFSRDCPKESS 160
Query: 235 GGGGSCFNCGKPGHFAREC 253
GG C+ C +PGH +C
Sbjct: 161 GGEKICYKCQQPGHVQSQC 179
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 30/148 (20%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++R+C +++ CY CG H +RDCP+ +
Sbjct: 21 GAAKCYNCGNEGHMSRDCPEGPKDTK------SCYRCGQAGHISRDCPQGGNVGGGGGPS 74
Query: 187 SGGCFKCGGYGHLARDCITR-------------------GSGGGGGGRCYNCGKSGHLAR 227
S C+KCG GH+AR+C G GG CY+CG GH++R
Sbjct: 75 SSECYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHMSR 134
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTK 255
DC G C+NCG+ GHF+R+C K
Sbjct: 135 DC-----TNGSKCYNCGENGHFSRDCPK 157
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 193 CGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARE 252
CG GH AR+C RG+ +CYNCG GH++RDC G SC+ CG+ GH +R+
Sbjct: 7 CGAAGHQARECPNRGAA-----KCYNCGNEGHMSRDC-PEGPKDTKSCYRCGQAGHISRD 60
Query: 253 CTK 255
C +
Sbjct: 61 CPQ 63
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH++R+CT N CYNCG+ HF+RDCP++ G
Sbjct: 122 TCYSCGGYGHMSRDCT----------NGSKCYNCGENGHFSRDCPKESSGGEKI------ 165
Query: 190 CFKCGGYGHLARDC 203
C+KC GH+ C
Sbjct: 166 CYKCQQPGHVQSQC 179
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 45/120 (37%), Gaps = 29/120 (24%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNN----------------NSGGCYNCGDPEHF 169
P CY C VGHVAR C + + CY+CG H
Sbjct: 73 PSSSECYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHM 132
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+RDC N C+ CG GH +RDC S GG CY C + GH+ C
Sbjct: 133 SRDC-----------TNGSKCYNCGENGHFSRDCPKESS--GGEKICYKCQQPGHVQSQC 179
>gi|148666816|gb|EDK99232.1| cellular nucleic acid binding protein, isoform CRA_e [Mus musculus]
Length = 142
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 25/130 (19%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 37 VTCYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQ 82
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 83 KCYSCGEFGHIQKDC--------TKVKCYRCGETGHVAINCSKTSEV---NCYRCGESGH 131
Query: 249 FARECTKVAN 258
ARECT A
Sbjct: 132 LARECTIEAT 141
>gi|50550507|ref|XP_502726.1| YALI0D12056p [Yarrowia lipolytica]
gi|49648594|emb|CAG80914.1| YALI0D12056p [Yarrowia lipolytica CLIB122]
Length = 197
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 31/164 (18%)
Query: 114 NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSN--------------------Y 153
ND + P C+ C+ GH+ +EC N +
Sbjct: 41 NDGHMSRDCTEEPKEKACFKCNQPGHILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAP 100
Query: 154 NNNSGGCYNCGDPEHFARDC-PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
SG CY CG P HFAR C GG+ + C+ CGG GHL++DC
Sbjct: 101 RGPSGVCYKCGKPGHFARACRSVPAGGAPPKFGRTQSCYSCGGQGHLSKDCTV------- 153
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
G +CYNCG GH++++CG + C+NC KPGH A +C +V
Sbjct: 154 GQKCYNCGSMGHVSKECGEAQS---RVCYNCKKPGHIAIKCDEV 194
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 63/155 (40%), Gaps = 46/155 (29%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+NC GH R C R N CYNCG+ H +RDC +
Sbjct: 14 TCFNCGEFGHQVRACP---RVGNPV-----CYNCGNDGHMSRDC--------TEEPKEKA 57
Query: 190 CFKCGGYGHLARDCITR-----------------------GSGGGGGGRCYNCGKSGHLA 226
CFKC GH+ ++C G+ G G CY CGK GH A
Sbjct: 58 CFKCNQPGHILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAPRGPSGVCYKCGKPGHFA 117
Query: 227 RDCGAGGAGGGG-------SCFNCGKPGHFARECT 254
R C + AGG SC++CG GH +++CT
Sbjct: 118 RACRSVPAGGAPPKFGRTQSCYSCGGQGHLSKDCT 152
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 49/122 (40%), Gaps = 38/122 (31%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+NCG+ H R CPR + C+ CG GH++RDC C+ C
Sbjct: 15 CFNCGEFGHQVRACPRV---------GNPVCYNCGNDGHMSRDCTEEPKEKA----CFKC 61
Query: 220 GKSGHLARDCGAGGA-------------------------GGGGSCFNCGKPGHFARECT 254
+ GH+ ++C A G G C+ CGKPGHFAR C
Sbjct: 62 NQPGHILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAPRGPSGVCYKCGKPGHFARACR 121
Query: 255 KV 256
V
Sbjct: 122 SV 123
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 176 QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+G + + S CF CG +GH R C G+ CYNCG GH++RDC
Sbjct: 1 MEGQAQQFRGYSRTCFNCGEFGHQVRACPRVGN-----PVCYNCGNDGHMSRDCTE--EP 53
Query: 236 GGGSCFNCGKPGHFARECTK 255
+CF C +PGH +EC +
Sbjct: 54 KEKACFKCNQPGHILKECPQ 73
>gi|224012555|ref|XP_002294930.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
gi|220969369|gb|EED87710.1| cold-shock DNA-binding domain-containing protein [Thalassiosira
pseudonana CCMP1335]
Length = 102
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGA---DLFVHQKSIKSDGYRTLYENQSVEFDV 57
MA+ R G V WF KGYGFI P +G D+FVHQ SI DGYRTL E VEF++
Sbjct: 1 MAE--RVLGNVKWFSNKKGYGFITPAEGATVAEDIFVHQSSIHCDGYRTLDEGWEVEFEI 58
Query: 58 QLEADGKYQALDVTAPGGAP 77
+ DGK +A+ VTAPGG P
Sbjct: 59 GHDDDGKVKAVSVTAPGGGP 78
>gi|396482148|ref|XP_003841407.1| similar to zinc knuckle domain containing protein [Leptosphaeria
maculans JN3]
gi|312217981|emb|CBX97928.1| similar to zinc knuckle domain containing protein [Leptosphaeria
maculans JN3]
Length = 220
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 69/154 (44%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C VGH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACFKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNGCPHPR------TTETKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---------- 238
C+ C G GH+ DC T R SG G GRCY+CG SGHLAR+C G GG G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGTSGRCYSCGLSGHLARNCPNPGMGGRGVGAPPRGGGF 112
Query: 239 ---------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGGFRGGFAGGARPATCYKCGGPNHFARDCQAQA 146
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + SG CY+CG H AR+CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYSCGLSGHLARNCPNPGMGGRGVGAPPRGG 110
Query: 180 --------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 GFGGGFRGGFAGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 164
Query: 232 GGAG----GGGSCFNCGKPGHFARECTK 255
G G +C+ CG+ GH +R+C +
Sbjct: 165 PNGGPLNTAGKTCYRCGETGHISRDCAQ 192
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 127 ATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLNTAGK 175
Query: 189 GCFKCGGYGHLARDC 203
C++CG GH++RDC
Sbjct: 176 TCYRCGETGHISRDC 190
>gi|358388038|gb|EHK25632.1| hypothetical protein TRIVIDRAFT_167877 [Trichoderma virens Gv29-8]
Length = 178
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 38/158 (24%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNY---------------------NNNSGGCYNCGD 165
G CYNC G GH++R+CT +++ + S CY CG+
Sbjct: 26 GPAKCYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRDCPQAGGAGSGQSTECYKCGE 85
Query: 166 PEHFARDCPRQQGGSNSYNNNSGG----------CFKCGGYGHLARDCITRGSGGGGGGR 215
H AR CP+ GG + C+ CGGYGH++R+C+ G +
Sbjct: 86 KGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGYGHMSRECVN-------GMK 138
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+SGH +RDC AGG C+ C + GH +C
Sbjct: 139 CYNCGESGHYSRDCPKESAGGEKICYKCQQSGHVQAQC 176
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CY+CG H ARDCP C+ CGG GH++RDC CY
Sbjct: 7 GACYSCGSTGHQARDCP---------TKGPAKCYNCGGEGHISRDCTEPMKDNKS---CY 54
Query: 218 NCGKSGHLARDCG-AGGAGGGGS--CFNCGKPGHFARECTK 255
CG+ GH++RDC AGGAG G S C+ CG+ GH AR C K
Sbjct: 55 KCGQQGHISRDCPQAGGAGSGQSTECYKCGEKGHIARSCPK 95
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 69/148 (46%), Gaps = 33/148 (22%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
Y P G CY+C GH AR+C + CYNCG H +RDC + S
Sbjct: 3 YTPRGA-CYSCGSTGHQARDCPT--------KGPAKCYNCGGEGHISRDCTEPMKDNKS- 52
Query: 184 NNNSGGCFKCGGYGHLARDCITR-GSGGGGGGRCYNCGKSGHLARDC------------- 229
C+KCG GH++RDC G+G G CY CG+ GH+AR C
Sbjct: 53 ------CYKCGQQGHISRDCPQAGGAGSGQSTECYKCGEKGHIARSCPKSGGGFGGNSYG 106
Query: 230 ---GAGGAGGGGSCFNCGKPGHFARECT 254
G G G G +C++CG GH +REC
Sbjct: 107 GNSGGYGGGAGKTCYSCGGYGHMSRECV 134
>gi|403291696|ref|XP_003936912.1| PREDICTED: cellular nucleic acid-binding protein-like [Saimiri
boliviensis boliviensis]
Length = 169
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC GH+A++C +R + CY CG P H A DC RQ+
Sbjct: 63 GNICYNCGRSGHIAKDCNEPKRERD-----QCCYTCGRPGHLACDCDRQK---------E 108
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG GH+ +DC +CY CG++GH+A C +C+ CGKPG
Sbjct: 109 QKCYACGQLGHIQKDC--------AKVKCYRCGETGHMAISCSKAIQV---NCYRCGKPG 157
Query: 248 HFARECTKVAN 258
H AREC A
Sbjct: 158 HLARECPSEAT 168
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
S + S C++CG GH A++C+ G CYNCG+SGH+A+DC C+
Sbjct: 39 SSTSLSYTCYRCGESGHQAKNCVL-------GNICYNCGRSGHIAKDCNEPKRERDQCCY 91
Query: 242 NCGKPGHFARECTK 255
CG+PGH A +C +
Sbjct: 92 TCGRPGHLACDCDR 105
>gi|239609786|gb|EEQ86773.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ER-3]
gi|327353830|gb|EGE82687.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 226
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC------------PRQQG 178
CY+C G+GHV +C + R N SG CYNC P H AR+C P +G
Sbjct: 52 CYHCQGLGHVQADCPTLRINGG--ATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRG 109
Query: 179 GSNSYNN-------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G N + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 110 GFNPPFRGGFVGYPRAAMCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTA 163
Query: 232 GGAGG----GGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 164 PNGGPLSSVGKVCYKCSQAGHISRDC 189
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 65/154 (42%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSAERL---------CYNCKQPGHESNGCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------ 236
C+ C G GH+ DC T R +GG GRCYNC GHLAR+C + G G
Sbjct: 52 CYHCQGLGHVQADCPTLRINGGATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRGGF 111
Query: 237 -------------GGSCFNCGKPGHFARECTKVA 257
C+ CG P HFAR+C A
Sbjct: 112 NPPFRGGFVGYPRAAMCYKCGGPNHFARDCQAQA 145
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 83 NNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVAR 142
N N + N G G G G N R GY P +CY C G H AR
Sbjct: 81 NCNLPGHLARNCLSAGMQGAMRGAPAVRGGFNPPFRGGFVGY-PRAAMCYKCGGPNHFAR 139
Query: 143 ECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARD 202
+C + + CY CG H +RDC GG S C+KC GH++RD
Sbjct: 140 DCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSVGKV--CYKCSQAGHISRD 188
Query: 203 C 203
C
Sbjct: 189 C 189
>gi|242824530|ref|XP_002488277.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713198|gb|EED12623.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 265
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR---QQG---GSNSYN 184
CY+C G+GHV +C + R N N G CY CG P H AR+CP Q G GS +
Sbjct: 52 CYHCQGLGHVQADCPTLRLNGG--ANGGRCYGCGQPGHLARNCPTPNIQTGAGRGSGAPR 109
Query: 185 NN--------------SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
N + C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 110 GNFGGSLRGGFGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 163
Query: 231 AGGAG----GGGSCFNCGKPGHFAREC 253
A G G C+ C + GH +R+C
Sbjct: 164 APNGGPLSSAGKVCYKCSQAGHISRDC 190
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 68/155 (43%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSAERL---------CYNCTYRCHESNACPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC-------GAGGAGG----- 236
C+ C G GH+ DC T R +GG GGRCY CG+ GHLAR+C GAG G
Sbjct: 52 CYHCQGLGHVQADCPTLRLNGGANGGRCYGCGQPGHLARNCPTPNIQTGAGRGSGAPRGN 111
Query: 237 --------------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 112 FGGSLRGGFGGYPRAATCYKCGGPNHFARDCQAQA 146
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 61/145 (42%), Gaps = 36/145 (24%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-------- 159
G+ + + + R NGG G CY C GH+AR C + + SG
Sbjct: 59 GHVQADCPTLRLNGGA---NGGRCYGCGQPGHLARNCPTPNIQTGAGRGSGAPRGNFGGS 115
Query: 160 -------------CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR 206
CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 116 LRGGFGGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCTAP 165
Query: 207 --GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 166 NGGPLSSAGKVCYKCSQAGHISRDC 190
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 53/131 (40%), Gaps = 21/131 (16%)
Query: 75 GAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNC 134
G P H ++N T N GRG G +GN G G P CY C
Sbjct: 83 GQPGHLARNCPTPNI----QTGAGRGSGAP------RGNFGGSLRGGFGGYPRAATCYKC 132
Query: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCG 194
G H AR+C + + CY CG H +RDC GG S C+KC
Sbjct: 133 GGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSAGKV--CYKCS 181
Query: 195 GYGHLARDCIT 205
GH++RDC T
Sbjct: 182 QAGHISRDCPT 192
>gi|263173451|gb|ACY69944.1| E3 ubiquitin ligase [Cimex lectularius]
Length = 143
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 131 CYNCDGVGHVAREC-TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ------------ 177
CY C+ GH AR+C S R + CY C HFARDC Q
Sbjct: 6 CYRCNRSGHYARDCPQSGDRERGGFRSKEKCYKCNRFGHFARDCKEDQDRCYRCNGVGHI 65
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
N + C+ C GH+ARDC + GGG CY C K GH+ARDC
Sbjct: 66 ARECQQNPDEPSCYTCNKTGHMARDCPEQRENSRGGGACYTCNKQGHVARDCPESVR--- 122
Query: 238 GSCFNCGKPGHFARECTK 255
SC++CGK GH +REC K
Sbjct: 123 -SCYSCGKAGHISRECNK 139
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 26/122 (21%)
Query: 156 NSGGCYNCGDPEHFARDCP----RQQGGSNSYNNNSGGCFKCGGYGHLARDC------IT 205
NSG CY C H+ARDCP R++GG S C+KC +GH ARDC
Sbjct: 2 NSGSCYRCNRSGHYARDCPQSGDRERGGFRSKEK----CYKCNRFGHFARDCKEDQDRCY 57
Query: 206 RGSGGGGGGR----------CYNCGKSGHLARDCGAG--GAGGGGSCFNCGKPGHFAREC 253
R +G G R CY C K+GH+ARDC + GGG+C+ C K GH AR+C
Sbjct: 58 RCNGVGHIARECQQNPDEPSCYTCNKTGHMARDCPEQRENSRGGGACYTCNKQGHVARDC 117
Query: 254 TK 255
+
Sbjct: 118 PE 119
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+GVGH+AREC N + CY C H ARDCP Q+ S G C
Sbjct: 56 CYRCNGVGHIARECQQN-------PDEPSCYTCNKTGHMARDCPEQRENSRG----GGAC 104
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ C GH+ARDC CY+CGK+GH++R+C G
Sbjct: 105 YTCNKQGHVARDCPESVRS------CYSCGKAGHISRECNKNSTG 143
>gi|344301675|gb|EGW31980.1| zinc-finger protein GIS2 [Spathaspora passalidarum NRRL Y-27907]
Length = 173
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG---SNS 182
P CY+C VGHV EC + + + CYNCG H +++C +Q G
Sbjct: 48 PTTKQCYSCGDVGHVQSECPNQAQGTK-------CYNCGQFGHISKNCDSEQVGGARKKF 100
Query: 183 YNNNSGG---CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG- 238
Y S C+KCGG H ARDC G +CY CGK+GH+++DC + G
Sbjct: 101 YPTKSAAGTTCYKCGGPNHFARDC------QAGVVKCYACGKTGHISKDCTSSSGGSNYG 154
Query: 239 --SCFNCGKPGHFARECT 254
+C+NCGK GH ++ECT
Sbjct: 155 SKTCYNCGKSGHISKECT 172
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH+A C R CYNC P H + DCP + +
Sbjct: 8 TCYKCGEVGHLADNCQQEERL---------CYNCHKPGHESTDCP------DPKQPTTKQ 52
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------G 237
C+ CG GH+ +C + G +CYNCG+ GH++++C + GG G
Sbjct: 53 CYSCGDVGHVQSECPNQAQGT----KCYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAG 108
Query: 238 GSCFNCGKPGHFAREC 253
+C+ CG P HFAR+C
Sbjct: 109 TTCYKCGGPNHFARDC 124
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 128 GVVCYNCDGVGHVARECTSNR----RNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGS 180
G CYNC GH+++ C S + R Y S CY CG P HFARDC Q G
Sbjct: 72 GTKCYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAGTTCYKCGGPNHFARDC---QAGV 128
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA 231
C+ CG GH+++DC + G G + CYNCGKSGH++++C A
Sbjct: 129 VK-------CYACGKTGHISKDCTSSSGGSNYGSKTCYNCGKSGHISKECTA 173
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA +C CYNC K GH + DC C++CG GH
Sbjct: 9 CYKCGEVGHLADNCQQEER------LCYNCHKPGHESTDCPDPKQPTTKQCYSCGDVGHV 62
Query: 250 ARECTKVAN 258
EC A
Sbjct: 63 QSECPNQAQ 71
>gi|302786020|ref|XP_002974781.1| hypothetical protein SELMODRAFT_58801 [Selaginella
moellendorffii]
gi|300157676|gb|EFJ24301.1| hypothetical protein SELMODRAFT_58801 [Selaginella
moellendorffii]
Length = 145
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GKV WF +G+GFI PDDG D+FVHQ SI ++G+R+L E + VE+ V+L DG+ +A
Sbjct: 1 GKVKWFSPTRGFGFITPDDGSPDIFVHQTSIHAEGFRSLREGEIVEYVVELGQDGRMRAG 60
Query: 69 DVTAPGGAPVH 79
+VT P GA V
Sbjct: 61 NVTGPKGAFVE 71
>gi|110759374|ref|XP_001119951.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780974|ref|XP_003249895.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780976|ref|XP_003249896.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780978|ref|XP_003249897.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|380028029|ref|XP_003697714.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028031|ref|XP_003697715.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028033|ref|XP_003697716.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028035|ref|XP_003697717.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028037|ref|XP_003697718.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
Length = 155
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSN-----------YNNNSGGCYNCGDPEHFARDCPRQQG 178
CY C+ +GH AREC + CY C HFAR+C Q
Sbjct: 5 ACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDKCYKCNQFGHFARECKEDQD 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG- 237
C++C G GH+A+DC G CYNC K+GH+AR C GG G
Sbjct: 65 L----------CYRCQGVGHIAKDCQQ-----GPEMSCYNCNKTGHMARSCPEGGNDSGR 109
Query: 238 ---GSCFNCGKPGHFARECTKV 256
SC+NC K GHFAR CT+V
Sbjct: 110 FGMQSCYNCNKTGHFARNCTEV 131
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
+ G CY C+ GH AREC ++ CY C H A+DC QQG S
Sbjct: 39 FARGRDKCYKCNQFGHFARECKEDQ---------DLCYRCQGVGHIAKDC--QQGPEMS- 86
Query: 184 NNNSGGCFKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ C GH+AR C G SG G CYNC K+GH AR+C GG +C+
Sbjct: 87 ------CYNCNKTGHMARSCPEGGNDSGRFGMQSCYNCNKTGHFARNC---TEVGGKACY 137
Query: 242 NCGKPGHFARECTK 255
CGK GH +REC +
Sbjct: 138 TCGKTGHLSRECDQ 151
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 31/101 (30%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSG--------------GGGGGRCYNCGKSGHLARDC-- 229
+S C+KC GH AR+C G G G +CY C + GH AR+C
Sbjct: 2 SSSACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDKCYKCNQFGHFARECKE 61
Query: 230 ---------GAG------GAGGGGSCFNCGKPGHFARECTK 255
G G G SC+NC K GH AR C +
Sbjct: 62 DQDLCYRCQGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPE 102
>gi|448081812|ref|XP_004194980.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359376402|emb|CCE86984.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 179
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 43/156 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----- 184
+CYNC GH + +C ++ S CY+CGD H DCP Q GS YN
Sbjct: 28 LCYNCREPGHESNDCPQPKQASQKQ-----CYSCGDLGHLQGDCPTQSQGSKCYNCGQFG 82
Query: 185 -------------------------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
+ + C+KCGG H ARDC G +CY C
Sbjct: 83 HISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGPNHFARDC------QAGLVKCYAC 136
Query: 220 GKSGHLARDCGAGGAGG--GGSCFNCGKPGHFAREC 253
GK+GH++++C A +G +C+ CG+ GH ++EC
Sbjct: 137 GKTGHISKECPAAASGDSLAKACYQCGQVGHISKEC 172
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 128 GVVCYNCDGVGHVARECTS---------NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
G CYNC GH++++CTS + N + + CY CG P HFARDC Q
Sbjct: 72 GSKCYNCGQFGHISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGPNHFARDC---QA 128
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
G C+ CG GH++++C SG CY CG+ GH++++C
Sbjct: 129 GLVK-------CYACGKTGHISKECPAAASGDSLAKACYQCGQVGHISKEC 172
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA +C + CYNC + GH + DC C++CG GH
Sbjct: 9 CYKCGEVGHLADNCQQQQR------LCYNCREPGHESNDCPQPKQASQKQCYSCGDLGHL 62
Query: 250 AREC 253
+C
Sbjct: 63 QGDC 66
>gi|406864044|gb|EKD17090.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 223
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 72/154 (46%), Gaps = 37/154 (24%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC----------------- 173
CY+C G+GHV +C + R + SG CYNCG P H AR C
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYNCGLPGHLARSCPAPAGPGPIPGVGRGLG 110
Query: 174 -PRQQG-------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHL 225
PR G+ + C+KCGG H ARDC + +CY CGK GH+
Sbjct: 111 APRGGFGGGYAPRGAFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHI 164
Query: 226 ARDCGAGGAG----GGGSCFNCGKPGHFARECTK 255
+RDC A G G +C+ CG+ GH +R+C +
Sbjct: 165 SRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCPQ 198
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 67/160 (41%), Gaps = 47/160 (29%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAG---------------- 232
C+ C G GH+ DC T R SG G GRCYNCG GHLAR C A
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGLPGHLARSCPAPAGPGPIPGVGRGLGAP 112
Query: 233 -----------GAGGGG----SCFNCGKPGHFARECTKVA 257
GA GG +C+ CG P HFAR+C A
Sbjct: 113 RGGFGGGYAPRGAFAGGPRPATCYKCGGPNHFARDCQAQA 152
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 129 GPRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLN 177
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC +G+ G
Sbjct: 178 TAGKTCYQCGEAGHISRDCPQKGANG 203
>gi|325092526|gb|EGC45836.1| zinc-finger protein GIS2 [Ajellomyces capsulatus H88]
Length = 226
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 65/154 (42%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSAERL---------CYNCKQPGHESNGCPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---------- 238
C+ C G GH+ DC T R SGG GGRCY C GHLAR C + G G G
Sbjct: 52 CYHCQGLGHVQADCPTLRISGGATGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGF 111
Query: 239 ---------------SCFNCGKPGHFARECTKVA 257
C+ CG P HFAR+C A
Sbjct: 112 NSAFRGGFAGYSRTAMCYKCGGPNHFARDCQAQA 145
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 69/151 (45%), Gaps = 31/151 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ------------QG 178
CY+C G+GHV +C + R + G CY C P H AR CP +G
Sbjct: 52 CYHCQGLGHVQADCPTLRISGG--ATGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRG 109
Query: 179 GSNSY-------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G NS + + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 110 GFNSAFRGGFAGYSRTAMCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCPA 163
Query: 232 GGAG----GGGSCFNCGKPGHFARECTKVAN 258
G G C+ C GH +R+C N
Sbjct: 164 PNGGPLSSAGKVCYKCSLAGHISRDCPTNTN 194
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRR--------------NSNY 153
G+ + + + R +GG G CY C GH+AR C S NS +
Sbjct: 59 GHVQADCPTLRISGGA---TGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAF 115
Query: 154 N------NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR- 206
+ + CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 116 RGGFAGYSRTAMCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCPAPN 165
Query: 207 -GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C +GH++RDC
Sbjct: 166 GGPLSSAGKVCYKCSLAGHISRDC 189
>gi|340719027|ref|XP_003397959.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 1
[Bombus terrestris]
gi|340719029|ref|XP_003397960.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 2
[Bombus terrestris]
gi|350399027|ref|XP_003485390.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Bombus
impatiens]
Length = 155
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSN-----------YNNNSGGCYNCGDPEHFARDCPRQQG 178
CY C+ +GH AREC + CY C HFAR+C Q
Sbjct: 5 ACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDKCYKCNQFGHFARECKEDQD 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG- 237
C++C G GH+A+DC G CYNC K+GH+AR C GG G
Sbjct: 65 L----------CYRCQGVGHIAKDCQQ-----GPEMSCYNCNKTGHMARSCPEGGNDSGR 109
Query: 238 ---GSCFNCGKPGHFARECTKV 256
SC+NC K GHFAR CT+V
Sbjct: 110 FGMQSCYNCNKTGHFARNCTEV 131
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
+ G CY C+ GH AREC ++ CY C H A+DC QQG S
Sbjct: 39 FARGRDKCYKCNQFGHFARECKEDQ---------DLCYRCQGVGHIAKDC--QQGPEMS- 86
Query: 184 NNNSGGCFKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ C GH+AR C G SG G CYNC K+GH AR+C GG +C+
Sbjct: 87 ------CYNCNKTGHMARSCPEGGNDSGRFGMQSCYNCNKTGHFARNC---TEVGGKACY 137
Query: 242 NCGKPGHFARECTK 255
CGKPGH +REC +
Sbjct: 138 TCGKPGHLSRECDQ 151
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 31/101 (30%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSG--------------GGGGGRCYNCGKSGHLARDC-- 229
+S C+KC GH AR+C G G G +CY C + GH AR+C
Sbjct: 2 SSSACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDKCYKCNQFGHFARECKE 61
Query: 230 ---------GAG------GAGGGGSCFNCGKPGHFARECTK 255
G G G SC+NC K GH AR C +
Sbjct: 62 DQDLCYRCQGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPE 102
>gi|383858694|ref|XP_003704834.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Megachile
rotundata]
Length = 155
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 69/136 (50%), Gaps = 23/136 (16%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
GG+ G CY C+ GH AREC ++ CY C H A+DC QQG
Sbjct: 37 GGFVRGRDKCYKCNQYGHFARECKEDQ---------DLCYRCSGVGHIAKDC--QQGPEM 85
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
S C+ C GH+AR C G SG CYNC K+GH+AR+C GG +
Sbjct: 86 S-------CYNCNKTGHIARSCPEGGNDSGRFAMQSCYNCNKTGHIARNC---TEAGGKT 135
Query: 240 CFNCGKPGHFARECTK 255
C+ CGKPGH +REC +
Sbjct: 136 CYMCGKPGHISRECDQ 151
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 63/142 (44%), Gaps = 30/142 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSN-----------YNNNSGGCYNCGDPEHFARDCPRQQG 178
CY C+ +GH AREC + CY C HFAR+C Q
Sbjct: 5 ACYKCNRMGHYARECPQGSGGGARGDRGRDREGGFVRGRDKCYKCNQYGHFARECKEDQD 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG- 237
C++C G GH+A+DC G CYNC K+GH+AR C GG G
Sbjct: 65 L----------CYRCSGVGHIAKDCQQ-----GPEMSCYNCNKTGHIARSCPEGGNDSGR 109
Query: 238 ---GSCFNCGKPGHFARECTKV 256
SC+NC K GH AR CT+
Sbjct: 110 FAMQSCYNCNKTGHIARNCTEA 131
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 41/101 (40%), Gaps = 31/101 (30%)
Query: 186 NSGGCFKCGGYGHLARDC------------ITRGSGGGGGGR--CYNCGKSGHLARDC-- 229
+S C+KC GH AR+C GG GR CY C + GH AR+C
Sbjct: 2 SSSACYKCNRMGHYARECPQGSGGGARGDRGRDREGGFVRGRDKCYKCNQYGHFARECKE 61
Query: 230 ---------GAG------GAGGGGSCFNCGKPGHFARECTK 255
G G G SC+NC K GH AR C +
Sbjct: 62 DQDLCYRCSGVGHIAKDCQQGPEMSCYNCNKTGHIARSCPE 102
>gi|212546049|ref|XP_002153178.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
marneffei ATCC 18224]
gi|210064698|gb|EEA18793.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
marneffei ATCC 18224]
Length = 246
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + CPR + +
Sbjct: 7 ACYKCGNIGHYAEVCSSAERL---------CYNCKQPGHESNACPRPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG----------- 237
C+ C G GH+ DC T R +GG GGRCY+CG++GHL R+C A G
Sbjct: 52 CYHCQGLGHVQADCPTLRLNGGANGGRCYSCGQAGHLVRNCPTPNAQPGAGRGSGAPRGN 111
Query: 238 ---------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 112 FGGSFRGGFGGYPRAATCYKCGGPNHFARDCQAQA 146
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 67/147 (45%), Gaps = 32/147 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR---QQGG-------- 179
CY+C G+GHV +C + R N N G CY+CG H R+CP Q G
Sbjct: 52 CYHCQGLGHVQADCPTLRLNGG--ANGGRCYSCGQAGHLVRNCPTPNAQPGAGRGSGAPR 109
Query: 180 ---------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+ C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 110 GNFGGSFRGGFGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 163
Query: 231 AGGAG----GGGSCFNCGKPGHFAREC 253
A G G C+ C + GH +R+C
Sbjct: 164 APNGGPLSSAGKVCYKCSQAGHISRDC 190
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 36/145 (24%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG-------- 159
G+ + + + R NGG G CY+C GH+ R C + SG
Sbjct: 59 GHVQADCPTLRLNGGA---NGGRCYSCGQAGHLVRNCPTPNAQPGAGRGSGAPRGNFGGS 115
Query: 160 -------------CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR 206
CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 116 FRGGFGGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCTAP 165
Query: 207 --GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 166 NGGPLSSAGKVCYKCSQAGHISRDC 190
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S
Sbjct: 124 PRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSAG 174
Query: 186 NSGGCFKCGGYGHLARDCIT 205
C+KC GH++RDC T
Sbjct: 175 KV--CYKCSQAGHISRDCPT 192
>gi|171694371|ref|XP_001912110.1| hypothetical protein [Podospora anserina S mat+]
gi|170947134|emb|CAP73939.1| unnamed protein product [Podospora anserina S mat+]
Length = 145
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNN----NSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
CY C GH++R+C + +S CY CG+ H AR+C + N
Sbjct: 14 TCYRCGQAGHISRDCPTGGDQGPRQGGGGGSSAECYKCGEVGHIARNCQKGGNSYGGGYN 73
Query: 186 -------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
N C+ CGG GHL+RDC+ G +CYNCG SGHL+R+C GG
Sbjct: 74 SGYGGNFNQKTCYSCGGMGHLSRDCV-------NGNKCYNCGVSGHLSRECPKESTGGEK 126
Query: 239 SCFNCGKPGHFARECTKVA 257
C+ C + GH +C A
Sbjct: 127 ICYKCQQSGHVQSQCPNSA 145
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 199 LARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG---------GGGSCFNCGKPGHF 249
++RDC G CY CG++GH++RDC GG C+ CG+ GH
Sbjct: 1 MSRDC---PEGPKDTKTCYRCGQAGHISRDCPTGGDQGPRQGGGGGSSAECYKCGEVGHI 57
Query: 250 ARECTK 255
AR C K
Sbjct: 58 ARNCQK 63
>gi|320591584|gb|EFX04023.1| zinc knuckle nucleic acid-binding protein [Grosmannia clavigera
kw1407]
Length = 228
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 67/156 (42%), Gaps = 43/156 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + ++
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTDAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---------- 238
C+ C G GH+ DC T R SG GGRCY+CG+ GHLAR C A G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAATGGRCYSCGQQGHLARACPTPNAAGLGRGVALPPRGG 112
Query: 239 -----------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 FAGYGRGGFAVGGPRPATCYKCGGPNHFARDCQAQA 148
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + G CY+CG H AR CP
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAATG--GRCYSCGQQGHLARACPTPNAAGLGRGVALPPR 110
Query: 180 -----SNSYNNNSGG-----CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
GG C+KCGG H ARDC + +CY CGK GH++R+C
Sbjct: 111 GGFAGYGRGGFAVGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISREC 164
Query: 230 GAGGAG----GGGSCFNCGKPGHFARECTK 255
A G G +C+ CG+ GH +R+C +
Sbjct: 165 TAPNGGPLNTAGKTCYQCGEAGHISRDCPQ 194
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP CY C G H AR+C + CY CG H +R+C GG N
Sbjct: 125 GPRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRECTAPNGG--PLN 173
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGG 210
C++CG GH++RDC + + G
Sbjct: 174 TAGKTCYQCGEAGHISRDCPQKNTNG 199
>gi|300122354|emb|CBK22926.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS-YNN 185
G CY C G GHVAR+C N N N CYNCG P H A DCP ++ +
Sbjct: 26 AGKKCYVCGGFGHVARDCP----NQNGENTESVCYNCGKPGHIAADCPEERTSRPTGRAA 81
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
+ C C GH ARDC C NC + GH+ARDC C NC +
Sbjct: 82 KTIICRNCNKEGHFARDCPNEVV-------CRNCRQPGHIARDC-----TNQAVCRNCNQ 129
Query: 246 PGHFAREC 253
PGHFAR+C
Sbjct: 130 PGHFARDC 137
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C GH AR+C + R+ CY CG H ARDCP Q G N
Sbjct: 1 MECYVCGQSGHKARDCPN--RSQQKPGAGKKCYVCGGFGHVARDCPNQNG-----ENTES 53
Query: 189 GCFKCGGYGHLARDC----ITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+ CG GH+A DC +R +G C NC K GH ARDC C NC
Sbjct: 54 VCYNCGKPGHIAADCPEERTSRPTGRAAKTIICRNCNKEGHFARDCP-----NEVVCRNC 108
Query: 244 GKPGHFARECTKVA 257
+PGH AR+CT A
Sbjct: 109 RQPGHIARDCTNQA 122
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 130 VCYNCDGVGHVARECTSNR--RNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGG 179
VCYNC GH+A +C R R + + C NC HFARDCP RQ G
Sbjct: 54 VCYNCGKPGHIAADCPEERTSRPTGRAAKTIICRNCNKEGHFARDCPNEVVCRNCRQPGH 113
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
N C C GH ARDC C+ CG+SGH ARDC
Sbjct: 114 IARDCTNQAVCRNCNQPGHFARDCPNETV-------CHKCGQSGHKARDC 156
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 37/78 (47%), Gaps = 21/78 (26%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VVC NC GH+AR+CT N C NC P HFARDCP
Sbjct: 100 PNEVVCRNCRQPGHIARDCT----------NQAVCRNCNQPGHFARDCP----------- 138
Query: 186 NSGGCFKCGGYGHLARDC 203
N C KCG GH ARDC
Sbjct: 139 NETVCHKCGQSGHKARDC 156
>gi|358389553|gb|EHK27145.1| hypothetical protein TRIVIDRAFT_188061 [Trichoderma virens Gv29-8]
Length = 458
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 116 SRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
SR ++ G GV CYNC +GH + C+ + + CYNCG H RDCP
Sbjct: 244 SRLDDAGMVVDRGVPKCYNCGELGHTTKGCSQEKTEPSSEKPKISCYNCGAEGHRVRDCP 303
Query: 175 RQ-----------QGGSNSY------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
+ G N+ N ++ C KC GH A+DC GG C
Sbjct: 304 EPRVDKFACKNCGKSGHNAKECEEPPNMDNVECRKCNKTGHFAKDC-----PDGGSRACR 358
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
NCG+ GH++++C +C NC + GHF++EC K
Sbjct: 359 NCGQEGHISKECDQPKNMDNVTCRNCEETGHFSKECPK 396
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 176 QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ G S +Y N CF CG GH +C G C+ C K GH+ +DC
Sbjct: 57 EAGASGAYANEK--CFGCGEEGHRRAECPK-----AGEQTCHYCKKEGHMRKDCPEAPPM 109
Query: 236 GGGSCFNCGKPGHFAREC 253
C NCG+ GHF C
Sbjct: 110 ---LCSNCGQEGHFRNSC 124
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC GH+++EC + N C NC + HF+++CP+ + S
Sbjct: 353 GSRACRNCGQEGHISKECDQPKNMDNVT-----CRNCEETGHFSKECPKPRDWSKVQ--- 404
Query: 187 SGGCFKCGGYGHLARDC 203
C C +GH C
Sbjct: 405 ---CSNCEQFGHTKVRC 418
>gi|68482666|ref|XP_714730.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|68482937|ref|XP_714599.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436181|gb|EAK95548.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436321|gb|EAK95685.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|238882592|gb|EEQ46230.1| zinc-finger protein GIS2 [Candida albicans WO-1]
Length = 175
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 44/158 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----- 184
+CYNC GH + +C ++N+ + CY+CGD H +CP Q G+ YN
Sbjct: 28 LCYNCHKPGHESNDCPDPKQNT-----AKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFG 82
Query: 185 -------------NNSGG------------CFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
NN+ C+KCGG H ARDC +CY C
Sbjct: 83 HISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDC------QANTVKCYAC 136
Query: 220 GKSGHLARDCGAGGAG---GGGSCFNCGKPGHFARECT 254
GK GH+++DC + G +C+NCGK GH ++ECT
Sbjct: 137 GKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKECT 174
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSN----YNNNSG-----GCYNCGDPEHFARDCPRQQG 178
G CYNC GH+++ C S ++N + SG CY CG P HFARDC
Sbjct: 72 GAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDC----- 126
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA 231
N+ C+ CG GH+++DC + G + CYNCGKSGH++++C A
Sbjct: 127 -----QANTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKECTA 175
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GH+A DC CYNC K GH + DC C++CG GH
Sbjct: 9 CYKCGEVGHVADDCQQEER------LCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62
Query: 250 ARECTKVAN 258
EC A
Sbjct: 63 QTECPNQAQ 71
>gi|392343296|ref|XP_003754844.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|392355786|ref|XP_003752133.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|149055591|gb|EDM07175.1| rCG38105 [Rattus norvegicus]
Length = 170
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++CT +R CY C P H ARDC RQ+
Sbjct: 66 TCYNCGRRGHIAKDCTQAKRE-----REQCCYICSRPGHLARDCDRQE---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C SC+ CG+ GH
Sbjct: 112 CYTCGEFGHIQKDCTQ--------IKCYRCGENGHMAVNCSKASEV---SCYRCGESGHL 160
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 161 ARECPIEAT 169
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSN-----------SYNNNSGGCFKCGGYGHLARDCITRG 207
C+ CG H+AR+CP+ S + S C++CG GH A+DC
Sbjct: 5 SCFKCGRSGHWARECPKGGTRGRTTRGRTRGPQCSSASQSDVCYRCGETGHYAKDCDLLQ 64
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCG+ GH+A+DC C+ C +PGH AR+C +
Sbjct: 65 DT------CYNCGRRGHIAKDCTQAKREREQCCYICSRPGHLARDCDR 106
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
VCY C GH A++C + CYNCG H A+DC + +
Sbjct: 46 VCYRCGETGHYAKDC---------DLLQDTCYNCGRRGHIAKDC------TQAKREREQC 90
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ C GHLARDC + +CY CG+ GH+ +DC C+ CG+ GH
Sbjct: 91 CYICSRPGHLARDCDRQEEQ-----KCYTCGEFGHIQKDCTQI------KCYRCGENGHM 139
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 140 AVNCSKASE 148
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 27/142 (19%)
Query: 127 GGVVCYNCDGVGHVARECTSNRR------------NSNYNNNSGGCYNCGDPEHFARDCP 174
G C+ C GH AREC + + S CY CG+ H+A+DC
Sbjct: 2 SGKSCFKCGRSGHWARECPKGGTRGRTTRGRTRGPQCSSASQSDVCYRCGETGHYAKDCD 61
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
Q C+ CG GH+A+DC + CY C + GHLARDC
Sbjct: 62 LLQ----------DTCYNCGRRGHIAKDCTQ--AKREREQCCYICSRPGHLARDCDRQEE 109
Query: 235 GGGGSCFNCGKPGHFARECTKV 256
C+ CG+ GH ++CT++
Sbjct: 110 ---QKCYTCGEFGHIQKDCTQI 128
>gi|303283324|ref|XP_003060953.1| cold-shock protein with RNA binding domain [Micromonas pusilla
CCMP1545]
gi|226457304|gb|EEH54603.1| cold-shock protein with RNA binding domain [Micromonas pusilla
CCMP1545]
Length = 316
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+ +G V WF+ AKG+GFI +DG D+FVHQ I S+G+R+L + + VEF +Q DG+
Sbjct: 38 VKMSGTVNWFNVAKGFGFITREDGQGDIFVHQSDIYSEGFRSLRDEEPVEFTLQEIGDGR 97
Query: 65 YQALDVTAPGGAPVHSSKNNNT 86
Y+A+ VT P GA V + N+
Sbjct: 98 YKAVHVTGPNGAFVQGALPRNS 119
>gi|392863891|gb|EAS35332.2| zinc knuckle transcription factor [Coccidioides immitis RS]
Length = 482
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C C +GH AR+C R + + GC NCG+P+H A+ CP +
Sbjct: 292 VKCVICKEIGHRARDCIQPRIDKS------GCRNCGNPDHHAKQCPEPRSAEGVE----- 340
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH A+DC +G C NCG+ GH++++C +C NC K GH
Sbjct: 341 -CKKCQQVGHFAKDCPEKGVNSRA---CRNCGEEGHMSKECDKPRNMDNVTCRNCEKTGH 396
Query: 249 FARECTK 255
+R+C +
Sbjct: 397 MSRDCPE 403
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
NN+ C+NCG P HF+R+CP + SG CF CG GH +C + G
Sbjct: 47 NNNDACHNCGQPGHFSRECPEPRKA-------SGACFNCGEEGHNKAEC---PNPRVFKG 96
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C GH A +C C NC GH ++CT+
Sbjct: 97 TCRICQAEGHPAFECPDKAP---DVCKNCKGEGHKTKDCTE 134
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 14/109 (12%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C VGH A++C NS C NCG+ H +++C + + N ++
Sbjct: 338 GVECKKCQQVGHFAKDCPEK------GVNSRACRNCGEEGHMSKECDKPR------NMDN 385
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
C C GH++RDC +C NC + GH R C G
Sbjct: 386 VTCRNCEKTGHMSRDCPEEKD--WSKVQCTNCKEMGHTFRRCNKPAEGA 432
>gi|70991320|ref|XP_750509.1| zinc knuckle domain protein (Byr3) [Aspergillus fumigatus Af293]
gi|66848141|gb|EAL88471.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
Af293]
gi|159130982|gb|EDP56095.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
A1163]
Length = 190
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSN 181
P CY C GH++REC+ NYN G CY CG H AR+C +
Sbjct: 60 APKEKSCYRCGVAGHISRECSQAGSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGG 119
Query: 182 SYNNNSGG-----CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ + G C+ CGG+GH+ARDC G +CYNCG GH++RDC A G
Sbjct: 120 GFGHGGYGGRQQTCYSCGGFGHMARDCTH-------GQKCYNCGDVGHVSRDCPT-EAKG 171
Query: 237 GGSCFNCGKPGHFAREC 253
C+ C +PGH C
Sbjct: 172 ERVCYKCKQPGHVQAAC 188
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 127 GGVVCYNC---DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
G CYNC G GHV+RECT + + CY CG H +R+C + G N
Sbjct: 37 GTPTCYNCGATIGQGHVSRECTVAPKEKS-------CYRCGVAGHISRECSQAGSGDNYN 89
Query: 184 NNNSGG--CFKCGGYGHLARDCITRGSGGGGGG---------RCYNCGKSGHLARDCGAG 232
SGG C+KCG GH+AR+C G+ GGG G CY+CG GH+ARDC
Sbjct: 90 GAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDCTH- 148
Query: 233 GAGGGGSCFNCGKPGHFARECTKVAN 258
G C+NCG GH +R+C A
Sbjct: 149 ----GQKCYNCGDVGHVSRDCPTEAK 170
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 60/125 (48%), Gaps = 35/125 (28%)
Query: 164 GDPEHFARDCPRQQGGSNSYN-----------------NNSGGCFKCGGYGHLARDCITR 206
GD H ARDCP++ G YN C++CG GH++R+C
Sbjct: 24 GDASHQARDCPKK-GTPTCYNCGATIGQGHVSRECTVAPKEKSCYRCGVAGHISRECSQA 82
Query: 207 GSG------GGGGGRCYNCGKSGHLARDCGAGGAGGGG-----------SCFNCGKPGHF 249
GSG GG CY CG+ GH+AR+C GG GGG +C++CG GH
Sbjct: 83 GSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHM 142
Query: 250 ARECT 254
AR+CT
Sbjct: 143 ARDCT 147
>gi|281208685|gb|EFA82861.1| hypothetical protein PPL_04556 [Polysphondylium pallidum PN500]
Length = 615
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 50/190 (26%)
Query: 111 KGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNY----NNNSGG------- 159
KGN R N GG C+ C+ GH++R+C +S+ N+ S G
Sbjct: 14 KGNRGPRGNQKGGGTGHDRACFKCNQTGHISRDCPEASSSSSSRAGGNDRSSGGGAGNDR 73
Query: 160 -CYNCGDPEHFARDCPR-----------------------QQGGSNSYNNNSGGCFKCGG 195
C+ C H +RDCP Q+GGS ++ CFKC
Sbjct: 74 ACFKCNQTGHISRDCPEASSGGYKNNNNNNNQYNGGNRGNQKGGSTGHDR---ACFKCNQ 130
Query: 196 YGHLARDCITRGS-----GGGGGGRCYNCGKSGHLARDCGAGGA-------GGGGSCFNC 243
GH++RDC S GG CY C ++GH++RDC + G +CF C
Sbjct: 131 TGHISRDCPEASSSISSRAGGNDRSCYKCNQTGHISRDCPESSSSISSRAGGNDRNCFKC 190
Query: 244 GKPGHFAREC 253
+PGH +R+C
Sbjct: 191 NQPGHISRDC 200
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 28/111 (25%)
Query: 96 RGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVAREC--TSNRRNSNY 153
+GG G C+ C+ GH++R+C S+ +S
Sbjct: 115 KGGSTGHDRA-------------------------CFKCNQTGHISRDCPEASSSISSRA 149
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYN-NNSGGCFKCGGYGHLARDC 203
N CY C H +RDCP +S N CFKC GH++RDC
Sbjct: 150 GGNDRSCYKCNQTGHISRDCPESSSSISSRAGGNDRNCFKCNQPGHISRDC 200
>gi|85095325|ref|XP_960060.1| hypothetical protein NCU05800 [Neurospora crassa OR74A]
gi|28921519|gb|EAA30824.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 225
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + ++ CYNCG P H+ R CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRISGA--GSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGG 110
Query: 180 -------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 FGGFGRGGFAGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAP 164
Query: 233 GAG----GGGSCFNCGKPGHFAREC 253
G G +C+ C + GH +R+C
Sbjct: 165 NGGPLNTAGKTCYQCSETGHISRDC 189
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 62/170 (36%), Gaps = 60/170 (35%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + +CP + + +
Sbjct: 8 ACYKCGELGHHAEACSSPHRL---------CYNCKQPNHESSECPLPR------STEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAG------------- 235
C+ C G GH+ DC T R SG G RCYNCG+ GH R C G
Sbjct: 53 CYHCQGLGHVQADCPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGGFG 112
Query: 236 -------------------------------GGGSCFNCGKPGHFARECT 254
C+ CGK GH +R+CT
Sbjct: 113 GFGRGGFAGGARPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCT 162
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCP 174
+ CY C +GH++R+CT+ N N +G CY C + H +RDCP
Sbjct: 145 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYQCSETGHISRDCP 190
>gi|223056241|gb|ACM80366.1| vasa [Patiria miniata]
Length = 730
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI---TRGSGGGGGGRC 216
CYNC + H +RDCP + G G C+KC GH ARDC +RG GGGGG +C
Sbjct: 113 CYNCQEEGHMSRDCPNPKSGGGRGGGGGGECYKCHETGHFARDCPNAESRGGGGGGGNKC 172
Query: 217 YNCGKSGHLARDC------GAGGAGGGGSCFNCGKPGHFAREC 253
YNC + GH++RDC G G GGGG CF C + GHFAREC
Sbjct: 173 YNCQEEGHMSRDCPNPKSGGGRGGGGGGECFKCHQTGHFAREC 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-CYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C + + GG CY C + HFARDCP +
Sbjct: 113 CYNCQEEGHMSRDCPNPKSGGGRGGGGGGECYKCHETGHFARDCPNAESRGGG-GGGGNK 171
Query: 190 CFKCGGYGHLARDCITRGSGGGG-------GGRCYNCGKSGHLARDCG---AGGAGGGG 238
C+ C GH++RDC SGGG C+ C ++GH AR+C + AG GG
Sbjct: 172 CYNCQEEGHMSRDCPNPKSGGGRGGGGGGE---CFKCHQTGHFARECPNEESADAGAGG 227
>gi|115385941|ref|XP_001209517.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187964|gb|EAU29664.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 184
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNS 182
P CY C GH++REC GG CY CG H AR+CP+
Sbjct: 56 APKEKSCYRCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGGSYGGG 115
Query: 183 YNN----NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
+ C+ CGG+GH+ARDC G +CYNCG+ GH++RDC A G
Sbjct: 116 FGGGYGGRQQTCYSCGGFGHMARDCT-------HGQKCYNCGEVGHVSRDCPT-EAKGER 167
Query: 239 SCFNCGKPGHFAREC 253
C+NC +PGH C
Sbjct: 168 VCYNCKQPGHVQAAC 182
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 15/80 (18%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG------ 238
C++CG GH++R+C G GGG CY CG+ GH+AR+C GG+ GGG
Sbjct: 62 CYRCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGGSYGGGFGGGYG 121
Query: 239 ----SCFNCGKPGHFARECT 254
+C++CG GH AR+CT
Sbjct: 122 GRQQTCYSCGGFGHMARDCT 141
>gi|55925630|ref|NP_083434.1| zinc finger CCHC domain-containing protein 13 [Mus musculus]
gi|12854262|dbj|BAB29977.1| unnamed protein product [Mus musculus]
gi|21425582|emb|CAD33940.1| cellular nucleic acid binding-like protein [Mus musculus]
gi|148682147|gb|EDL14094.1| cellular nucleic acid binding protein 2 [Mus musculus]
gi|148877851|gb|AAI45773.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
gi|148878274|gb|AAI45775.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
Length = 170
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 25/124 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++CT +R CY C P H ARDC RQ+
Sbjct: 66 TCYNCGRRGHIAKDCTQAKRE-----REQCCYICSQPGHLARDCNRQE---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C SC+ CG+ GH
Sbjct: 112 CYTCGEFGHIQKDCTQ--------IKCYRCGENGHMAVNCSKTSEV---SCYRCGESGHL 160
Query: 250 AREC 253
AREC
Sbjct: 161 AREC 164
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSN-----------SYNNNSGGCFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP+ S N S C++CG GH A+DC
Sbjct: 2 SSKSCFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCG+ GH+A+DC C+ C +PGH AR+C +
Sbjct: 62 LLQDT------CYNCGRRGHIAKDCTQAKREREQCCYICSQPGHLARDCNR 106
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 60/138 (43%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRR------------NSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + N S CY CG+ H+A+DC Q
Sbjct: 6 CFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDCDLLQ- 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CY C + GHLARDC
Sbjct: 65 ---------DTCYNCGRRGHIAKDCTQ--AKREREQCCYICSQPGHLARDCNRQEE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C+ CG+ GH ++CT++
Sbjct: 111 KCYTCGEFGHIQKDCTQI 128
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
VCY C GH A++C + CYNCG H A+DC + +
Sbjct: 46 VCYRCGETGHYAKDC---------DLLQDTCYNCGRRGHIAKDC------TQAKREREQC 90
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ C GHLARDC +CY CG+ GH+ +DC C+ CG+ GH
Sbjct: 91 CYICSQPGHLARDC-----NRQEEQKCYTCGEFGHIQKDCTQI------KCYRCGENGHM 139
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 140 AVNCSKTSE 148
>gi|259484556|tpe|CBF80881.1| TPA: zinc knuckle domain protein (Byr3), putative (AFU_orthologue;
AFUA_1G07630) [Aspergillus nidulans FGSC A4]
Length = 171
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 70/159 (44%), Gaps = 47/159 (29%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP------RQQGGS 180
G CYNC G GHV+RECT + + CY CG H +R+CP R GG
Sbjct: 25 GTPTCYNCGGQGHVSRECTVAPKEKS-------CYRCGAVGHISRECPQAGENERPAGGQ 77
Query: 181 NSYNNNSGG--------------------------CFKCGGYGHLARDCITRGSGGGGGG 214
Y G C+ CGG+GH+ARDC G
Sbjct: 78 ECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQ-------GQ 130
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+CYNCG++GH++RDC A G C+ C +PGH C
Sbjct: 131 KCYNCGETGHVSRDCPT-EAKGERVCYQCKQPGHIQSAC 168
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 72/154 (46%), Gaps = 29/154 (18%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYN--------------NNSGGCYNCGDPEHFARD 172
GG VC+NC H AR+C + YN CY CG H +R+
Sbjct: 4 GGRVCFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRE 63
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG--------RCYNCGKSGH 224
CP Q G N C+KCG GH+AR+C GS GGG G CY+CG GH
Sbjct: 64 CP--QAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGH 121
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+ARDC G C+NCG+ GH +R+C A
Sbjct: 122 MARDCTQ-----GQKCYNCGETGHVSRDCPTEAK 150
>gi|384486824|gb|EIE79004.1| hypothetical protein RO3G_03709 [Rhizopus delemar RA 99-880]
Length = 160
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR----QQGGSN 181
P +CY C GH++R+CT S+Y + CY+C H +RDCP
Sbjct: 37 PAEKLCYKCSQPGHMSRDCT----QSSYTDGP-TCYSCNQVGHMSRDCPEGNSGGYSSRG 91
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
Y + C+ CG GH +RDC G +CYNCG SGH++RDC +C+
Sbjct: 92 GYGGSRASCYTCGQSGHFSRDCT-----AGQSPKCYNCGNSGHISRDCDQ--PAQARACY 144
Query: 242 NCGKPGHFAREC 253
C + GH AR+C
Sbjct: 145 KCQQVGHIARDC 156
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 24/137 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH++++CT CY C P H +RDC + S +
Sbjct: 19 LCYNCRQEGHMSKDCTEPPAEK-------LCYKCSQPGHMSRDC------TQSSYTDGPT 65
Query: 190 CFKCGGYGHLARDC--------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ C GH++RDC +RG GG CY CG+SGH +RDC AG + C+
Sbjct: 66 CYSCNQVGHMSRDCPEGNSGGYSSRGGYGGSRASCYTCGQSGHFSRDCTAGQS---PKCY 122
Query: 242 NCGKPGHFARECTKVAN 258
NCG GH +R+C + A
Sbjct: 123 NCGNSGHISRDCDQPAQ 139
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
H ARDC + + C+ C GH+++DC + CY C + GH++R
Sbjct: 8 HQARDC----------SKVASLCYNCRQEGHMSKDC----TEPPAEKLCYKCSQPGHMSR 53
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTK 255
DC G +C++C + GH +R+C +
Sbjct: 54 DCTQSSYTDGPTCYSCNQVGHMSRDCPE 81
>gi|335306205|ref|XP_001926395.3| PREDICTED: cellular nucleic acid-binding protein-like [Sus scrofa]
Length = 171
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 25/124 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R + CY CG P H ARDC RQ+
Sbjct: 67 ICYNCGKSGHIAKDCMEPKRERD-----QCCYTCGRPGHLARDCDRQE---------EQK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH+ +DC RCY CG++GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGERGHIQKDCTQ--------VRCYRCGETGHVAINCSKPSE---VNCYRCGESGHL 161
Query: 250 AREC 253
AREC
Sbjct: 162 AREC 165
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 26/130 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
++CY C GH A+ C + CYNCG H A+DC
Sbjct: 46 IICYRCGEPGHHAKNC---------DLQEDICYNCGKSGHIAKDC------MEPKRERDQ 90
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLARDC + +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 91 CCYTCGRPGHLARDCDRQEEQ-----KCYSCGERGHIQKDCTQV------RCYRCGETGH 139
Query: 249 FARECTKVAN 258
A C+K +
Sbjct: 140 VAINCSKPSE 149
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 160 CYNCGDPEHFARDCPRQQGGSN------------SYNNNSGGCFKCGGYGHLARDCITRG 207
C+ CG H+AR CP+ G S C++CG GH A++C +
Sbjct: 6 CFKCGRSGHWARGCPKGGGARGRGSRGRGRGPHCSSTTLPIICYRCGEPGHHAKNCDLQE 65
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCGKSGH+A+DC C+ CG+PGH AR+C +
Sbjct: 66 DI------CYNCGKSGHIAKDCMEPKRERDQCCYTCGRPGHLARDCDR 107
>gi|50291237|ref|XP_448051.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527362|emb|CAG61002.1| unnamed protein product [Candida glabrata]
Length = 155
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 130 VCYNCDGVGHVARECTSNRRNSN---YNNNSGG----------CYNCGDPEHFARDCPRQ 176
+CYNC+ GHV ECT R + YN G C+NC H +R+CP
Sbjct: 24 LCYNCNQPGHVQSECTMPRTVEHKQCYNCGETGHVKSECSIQRCFNCNQTGHVSRECPEP 83
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ G + + C+KCGG H+ARDC+ + +CY+CG+ GH++RDC G
Sbjct: 84 RKGRFGAASKNVSCYKCGGPNHVARDCMQTDT------KCYSCGRFGHVSRDCPNG--PN 135
Query: 237 GGSCFNCGKPGHFARECTKV 256
C+NC + GH +R+C +
Sbjct: 136 EKVCYNCNETGHISRDCPVL 155
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLA DC CYNC + GH+ +C C+NCG+ GH
Sbjct: 5 ACYVCGKIGHLADDC-------DSERLCYNCNQPGHVQSECTMPRTVEHKQCYNCGETGH 57
Query: 249 FARECT 254
EC+
Sbjct: 58 VKSECS 63
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 17/75 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CY C G HVAR+C CY+CG H +RDCP N
Sbjct: 95 VSCYKCGGPNHVARDCM---------QTDTKCYSCGRFGHVSRDCPN--------GPNEK 137
Query: 189 GCFKCGGYGHLARDC 203
C+ C GH++RDC
Sbjct: 138 VCYNCNETGHISRDC 152
>gi|261332658|emb|CBH15653.1| universal minicircle sequence binding protein,putative [Trypanosoma
brucei gambiense DAL972]
Length = 214
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 75/143 (52%), Gaps = 15/143 (10%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHFARDCP--RQQGGSN 181
GG CYNC GH +REC + R G CYNCG P HF+R+CP R
Sbjct: 70 GGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGPMGG 129
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDC---------GA 231
+ C+ CG GH +R+C G GGGR CY+C + GH+AR+C G
Sbjct: 130 APMGGGRACYNCGQPGHFSRECPNMRGGNMGGGRACYHCQQEGHIARECPNAPADAAAGG 189
Query: 232 GGAGGGGSCFNCGKPGHFARECT 254
AGGG +CFNCG+PGH +R C
Sbjct: 190 AAAGGGRACFNCGQPGHLSRACP 212
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 24/145 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH ARE + + + CY CG P+H +RDCP SN +
Sbjct: 15 GGNNCHRCGQPGHFARENVRTFPQGQWGDRA--CYTCGQPDHLSRDCP-----SNRGLHP 67
Query: 187 SGG---CFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDC-------- 229
GG C+ CG GH +R+C G GG CYNCG+ GH +R+C
Sbjct: 68 MGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGPM 127
Query: 230 GAGGAGGGGSCFNCGKPGHFARECT 254
G GGG +C+NCG+PGHF+REC
Sbjct: 128 GGAPMGGGRACYNCGQPGHFSRECP 152
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 64/111 (57%), Gaps = 21/111 (18%)
Query: 160 CYNCGDPEHFARD----CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGG 214
C+ CG P HFAR+ P+ Q G + C+ CG HL+RDC + RG GGG
Sbjct: 19 CHRCGQPGHFARENVRTFPQGQWGDRA-------CYTCGQPDHLSRDCPSNRGLHPMGGG 71
Query: 215 R-CYNCGKSGHLARDC--------GAGGAGGGGSCFNCGKPGHFARECTKV 256
R CYNCG+ GH +R+C G GGG +C+NCG+PGHF+REC +
Sbjct: 72 RACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNM 122
>gi|303322458|ref|XP_003071222.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110921|gb|EER29077.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 195
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--------PRQ 176
G G CY C VGH++REC + CY CG H +R+C
Sbjct: 67 GARGQECYKCGQVGHISRECPQGGESGEARGQE--CYKCGQVGHISRNCGQYSGYNGGGY 124
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
GS Y N C+ CGGYGH ARDC G +CYNCG++GH++RDC G G
Sbjct: 125 NAGSYRYGNRPLTCYSCGGYGHRARDCTQ-------GQKCYNCGETGHVSRDCTTEGK-G 176
Query: 237 GGSCFNCGKPGHFAREC 253
C+ C +PGH C
Sbjct: 177 ERVCYKCKQPGHVQAAC 193
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 28/145 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQGGSNSYNN 185
VVC + +A T+ R+ N CY CG H +RDCP+ + GG+
Sbjct: 20 AVVCQD------IASPLTAESRDCNEPAKEKSCYRCGLTGHISRDCPQAGESGGARGQE- 72
Query: 186 NSGGCFKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGHLARDCGAGGAGGGG------ 238
C+KCG GH++R+C G SG G CY CG+ GH++R+CG GG
Sbjct: 73 ----CYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNCGQYSGYNGGGYNAGS 128
Query: 239 --------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 129 YRYGNRPLTCYSCGGYGHRARDCTQ 153
>gi|448086305|ref|XP_004196068.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359377490|emb|CCE85873.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 178
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN----- 184
+CYNC GH + +C ++ S CY+CGD H +CP Q GS YN
Sbjct: 28 LCYNCREAGHESNDCPQPKQASQKQ-----CYSCGDLGHLQGECPTQSQGSKCYNCGQFG 82
Query: 185 ------------------------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCG 220
+ C+KCGG H ARDC G +CY CG
Sbjct: 83 HISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPNHFARDC------QAGLVKCYACG 136
Query: 221 KSGHLARDCGAGGAGG--GGSCFNCGKPGHFAREC 253
K+GH++++C A +G +C+ CG+ GH ++EC
Sbjct: 137 KTGHISKECPAAASGDSLAKACYQCGQVGHISKEC 171
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 128 GVVCYNCDGVGHVARECTS--------NRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG 179
G CYNC GH++++C+S + N + CY CG P HFARDC Q G
Sbjct: 72 GSKCYNCGQFGHISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPNHFARDC---QAG 128
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ CG GH++++C SG CY CG+ GH++++C
Sbjct: 129 LVK-------CYACGKTGHISKECPAAASGDSLAKACYQCGQVGHISKEC 171
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
++ NG + P CY C G H AR+C + CY CG H +++CP
Sbjct: 99 KKANGARF-PKAATCYKCGGPNHFARDCQAGLVK---------CYACGKTGHISKECPAA 148
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDC 203
G ++ + C++CG GH++++C
Sbjct: 149 ASG----DSLAKACYQCGQVGHISKEC 171
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA +C + CYNC ++GH + DC C++CG GH
Sbjct: 9 CYKCGEVGHLADNCQQQER------LCYNCREAGHESNDCPQPKQASQKQCYSCGDLGHL 62
Query: 250 AREC 253
EC
Sbjct: 63 QGEC 66
>gi|320590859|gb|EFX03302.1| zinc knuckle domain containing protein [Grosmannia clavigera
kw1407]
Length = 190
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN---- 185
CY C GH++R+C + + CY CG+ H AR+CP+ G N
Sbjct: 51 TCYRCGQAGHISRDCPQSAGPGGSGPSGAECYKCGEVGHIARNCPKGGFGGNPSGGAGGY 110
Query: 186 ----------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ C+ CGG GH++RDC+ G +CYNCG++GH +RDC
Sbjct: 111 GNSYGGGGGGGGYGGNQNKTCYSCGGVGHMSRDCVN-------GSKCYNCGETGHFSRDC 163
Query: 230 GAGGAGGGGSCFNCGKPGHFAREC 253
G C+ C +PGH +C
Sbjct: 164 PKASTSGEKICYKCQQPGHIQADC 187
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 36/156 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GH++R+C + + CY CG H +RDCP Q G +
Sbjct: 25 GAAKCYNCGGEGHMSRDCPEGPKETK------TCYRCGQAGHISRDCP-QSAGPGGSGPS 77
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGG------------------------RCYNCGKS 222
C+KCG GH+AR+C G GG G CY+CG
Sbjct: 78 GAECYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGGGGGGGGYGGNQNKTCYSCGGV 137
Query: 223 GHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH++RDC G C+NCG+ GHF+R+C K +
Sbjct: 138 GHMSRDC-----VNGSKCYNCGETGHFSRDCPKAST 168
>gi|145229969|ref|XP_001389293.1| zinc knuckle transcription factor (CnjB) [Aspergillus niger CBS
513.88]
gi|134055407|emb|CAK37116.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C NC GH AR+C RR N C NCG +H A +CP + N
Sbjct: 297 GVKCVNCSADGHRARDCPEPRR------NVFACRNCGAEDHKASECPNPRSAENVE---- 346
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C +C GH A+DC C NCG H+A+DC +C NC + G
Sbjct: 347 --CKRCNEMGHFAKDC----PQAPPPRTCRNCGSEDHIAKDCDKPRDVSTVTCRNCDEVG 400
Query: 248 HFARECTK 255
HF+R+C K
Sbjct: 401 HFSRDCPK 408
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C NC H+A++C R S C NC + HF+RDCP+++ S
Sbjct: 363 APPPRTCRNCGSEDHIAKDCDKPRDVSTVT-----CRNCDEVGHFSRDCPKKRDYSRVKC 417
Query: 185 NNSGGCFKCGGYGHLARDCIT 205
NN CG GH + C T
Sbjct: 418 NN------CGEMGHTIKRCPT 432
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 38/96 (39%), Gaps = 14/96 (14%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NCG HFAR+CP + CF CG GH +C G C C
Sbjct: 59 CRNCGSDGHFARNCPEPR--------KDMACFNCGEDGHNKSECTKPRVFKGA---CRIC 107
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
K GH A +C G C NC GH +C +
Sbjct: 108 NKEGHPAAECPEKGP---DVCKNCKMEGHKTMDCKE 140
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
Y+ C NCG H AR C + C C GH ARDC
Sbjct: 266 YDRQVPKCSNCGVLGHTARGC---KEEREERERVGVKCVNCSADGHRARDCPEPRRNVFA 322
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C NCG H A +C + C C + GHFA++C +
Sbjct: 323 ---CRNCGAEDHKASECPNPRSAENVECKRCNEMGHFAKDCPQAP 364
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 207 GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G G RC NCG GH AR+C +CFNCG+ GH ECTK
Sbjct: 50 AEGHGDDNRCRNCGSDGHFARNCPE--PRKDMACFNCGEDGHNKSECTK 96
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
V C NCD VGH +R+C R S C NCG+ H + CP ++ N+S
Sbjct: 391 VTCRNCDEVGHFSRDCPKKRDYSRVK-----CNNCGEMGHTIKRCPTANAAEDAPQNDS 444
>gi|241955521|ref|XP_002420481.1| zinc finger protein, putative [Candida dubliniensis CD36]
gi|223643823|emb|CAX41560.1| zinc finger protein, putative [Candida dubliniensis CD36]
Length = 175
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 44/158 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH + +C ++N+ + CY+CGD H +CP Q G+ YN G
Sbjct: 28 LCYNCHKPGHESNDCPDPKQNT-----AKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFG 82
Query: 190 ------------------------------CFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+KCGG H ARDC +CY C
Sbjct: 83 HISKNCDAAPSSTDHAPSFKRSSGRASGTTCYKCGGPNHFARDC------QANTVKCYAC 136
Query: 220 GKSGHLARDCGAGGAG---GGGSCFNCGKPGHFARECT 254
GK GH+++DC + G +C+NCGK GH ++ECT
Sbjct: 137 GKVGHISKDCHSAAGGSNFSAKTCYNCGKSGHISKECT 174
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 33/138 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH+A +C R CYNC P H + DCP + N +
Sbjct: 8 TCYKCGEVGHLADDCQQEER---------LCYNCHKPGHESNDCP------DPKQNTAKQ 52
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG--------------GAG 235
C+ CG GH+ +C + G +CYNCG+ GH++++C A G
Sbjct: 53 CYSCGDVGHIQTECPNQAQ----GAKCYNCGQFGHISKNCDAAPSSTDHAPSFKRSSGRA 108
Query: 236 GGGSCFNCGKPGHFAREC 253
G +C+ CG P HFAR+C
Sbjct: 109 SGTTCYKCGGPNHFARDC 126
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
Query: 128 GVVCYNCDGVGHVAREC----TSNRRNSNYNNNSG-----GCYNCGDPEHFARDCPRQQG 178
G CYNC GH+++ C +S ++ +SG CY CG P HFARDC
Sbjct: 72 GAKCYNCGQFGHISKNCDAAPSSTDHAPSFKRSSGRASGTTCYKCGGPNHFARDC----- 126
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGA 231
N+ C+ CG GH+++DC + G + CYNCGKSGH++++C A
Sbjct: 127 -----QANTVKCYACGKVGHISKDCHSAAGGSNFSAKTCYNCGKSGHISKECTA 175
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCG GHLA DC CYNC K GH + DC C++CG GH
Sbjct: 9 CYKCGEVGHLADDCQQEER------LCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62
Query: 250 ARECTKVAN 258
EC A
Sbjct: 63 QTECPNQAQ 71
>gi|226292807|gb|EEH48227.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 238
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQG---------- 178
CY+C G+GHV +C + R N SG CYNC H AR+CP QG
Sbjct: 62 CYHCQGLGHVQADCPTLRLNGG--ATSGRCYNCNILGHLARNCPSTGMQGAGRGVPSARG 119
Query: 179 -------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G+ + + C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 120 VFNSPFRGAFAGYARTATCYKCGGPNHFARDCQAQSM------KCYACGKLGHISRDCTA 173
Query: 232 GGAGG----GGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 174 PNGGPLSSVGKVCYKCSQAGHISRDC 199
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 32/115 (27%)
Query: 165 DPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSG 223
P H + CPR + + C+ C G GH+ DC T R +GG GRCYNC G
Sbjct: 43 QPGHESNGCPRPR------TTETKQCYHCQGLGHVQADCPTLRLNGGATSGRCYNCNILG 96
Query: 224 HLARDCGAGGAGGGG-------------------------SCFNCGKPGHFAREC 253
HLAR+C + G G G +C+ CG P HFAR+C
Sbjct: 97 HLARNCPSTGMQGAGRGVPSARGVFNSPFRGAFAGYARTATCYKCGGPNHFARDC 151
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
CY C G H AR+C + S CY CG H +RDC GG S
Sbjct: 136 ATCYKCGGPNHFARDCQAQ---------SMKCYACGKLGHISRDCTAPNGGPLSSVGKV- 185
Query: 189 GCFKCGGYGHLARDCIT 205
C+KC GH++RDC T
Sbjct: 186 -CYKCSQAGHISRDCPT 201
>gi|347828527|emb|CCD44224.1| hypothetical protein [Botryotinia fuckeliana]
Length = 280
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 34/149 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN----- 185
CY+C G+GHV +C + R + +G CYNCG P H AR CP G
Sbjct: 106 CYHCQGLGHVQADCPTLRISGA--GTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAP 163
Query: 186 ------------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
C+KCGG H ARDC + +CY CG++GH +R
Sbjct: 164 RGGFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGRTGHSSR 217
Query: 228 DCGAGGAG---GGGSCFNCGKPGHFAREC 253
+C + G G +C+ CG GH AR+C
Sbjct: 218 ECTSPNGGVNKAGKTCYTCGTEGHIARDC 246
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 64/158 (40%), Gaps = 45/158 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C S R CYNC P H + CP + +
Sbjct: 61 ACYKCGNVGHYAEVCASAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 105
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC-----GAGGAGGG------ 237
C+ C G GH+ DC T R SG G GRCYNCG GHLAR C G G G
Sbjct: 106 CYHCQGLGHVQADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAPRG 165
Query: 238 ------------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 166 GFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQAQA 203
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 54/134 (40%), Gaps = 47/134 (35%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------------------------C 160
CYNC GH+AR C N NN G C
Sbjct: 133 CYNCGMPGHLARAC------PNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATC 186
Query: 161 YNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNC 219
Y CG P HFARDC Q + C+ CG GH +R+C + G G+ CY C
Sbjct: 187 YKCGGPNHFARDCQAQ----------AMKCYACGRTGHSSRECTSPNGGVNKAGKTCYTC 236
Query: 220 GKSGHLARDCGAGG 233
G GH+ARDC + G
Sbjct: 237 GTEGHIARDCPSKG 250
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
+ CY C GH +RECTS N N CY CG H ARDCP +
Sbjct: 203 AMKCYACGRTGHSSRECTSP--NGGVNKAGKTCYTCGTEGHIARDCPSK 249
>gi|50475|emb|CAA77897.1| cellular nucleic acid binding protein clone 14 [Mus musculus]
Length = 171
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P+H ARDC + +
Sbjct: 67 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPDHLARDCD---------HADEQK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSE---VNCYRCGESGHL 161
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 162 ARECTIEAT 170
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE- 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK HLARDC
Sbjct: 65 --------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPDHLARDCDHADEQ--- 111
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 112 KCYSCGEFGHIQKDCTKV 129
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR---------------CYNCGKSGHLARDCG 230
+S CFKCG GH AR+C T G G G CY CG+SGHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC- 60
Query: 231 AGGAGGGGSCFNCGKPGHFARECTK 255
+C+NCG+ GH A++C +
Sbjct: 61 --DLQEDEACYNCGRGGHIAKDCKE 83
>gi|116201047|ref|XP_001226335.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
gi|88176926|gb|EAQ84394.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
Length = 222
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 67/153 (43%), Gaps = 40/153 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C S R CYNC P H + +CP + +
Sbjct: 8 ACYKCGELGHHAEACASPHRL---------CYNCKQPNHESNECPMPR------TTKAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC---GAGGAGGGG------- 238
C+ C G GH+ +C T R SG G G RCYNC GHLAR+C GAG GG
Sbjct: 53 CYHCQGLGHVQAECPTLRLSGAGAGNRCYNCDSIGHLARNCPNPPVPGAGRGGMVPRGGF 112
Query: 239 --------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 APVRGGFVGGPRPATCYKCGGPNHFARDCQAQA 145
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP------------RQQG 178
CY+C G+GHV EC + R + N CYNC H AR+CP +G
Sbjct: 53 CYHCQGLGHVQAECPTLRLSGAGAGNR--CYNCDSIGHLARNCPNPPVPGAGRGGMVPRG 110
Query: 179 GSNSYN------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
G C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 111 GFAPVRGGFVGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAP 164
Query: 233 GAG----GGGSCFNCGKPGHFARECTKVA 257
G G +C+ CG+ GH +R+C A
Sbjct: 165 NGGPLNTAGKTCYQCGEAGHISRDCANKA 193
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP CY C G H AR+C + CY CG H +RDC GG N
Sbjct: 122 GPRPATCYKCGGPNHFARDCQAQAMK---------CYACGKLGHISRDCTAPNGG--PLN 170
Query: 185 NNSGGCFKCGGYGHLARDCITRG 207
C++CG GH++RDC +
Sbjct: 171 TAGKTCYQCGEAGHISRDCANKA 193
>gi|336273387|ref|XP_003351448.1| hypothetical protein SMAC_07647 [Sordaria macrospora k-hell]
gi|380089245|emb|CCC12804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 227
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 32/147 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG----------- 179
CY+C G+GHV +C + R + ++ CYNCG P H+ R CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRISGA--GSTSRCYNCGQPGHYMRACPNPPTGGMPQRGVPVGR 110
Query: 180 ---------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 111 GGFGGFGRGGFVGGARPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCT 164
Query: 231 AGGAG----GGGSCFNCGKPGHFAREC 253
A G G +C+ C + GH +R+C
Sbjct: 165 APNGGPLNTAGKTCYQCSETGHISRDC 191
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 64/155 (41%), Gaps = 42/155 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + +CP + + +
Sbjct: 8 ACYKCGELGHHAEACSSPHR---------LCYNCKQPNHESSECPLPR------STEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGG------------ 236
C+ C G GH+ DC T R SG G RCYNCG+ GH R C GG
Sbjct: 53 CYHCQGLGHVQADCPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGGMPQRGVPVGRGG 112
Query: 237 --------------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 FGGFGRGGFVGGARPATCYKCGGPNHFARDCQAQA 147
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG-GCYNCGDPEHFARDCP 174
+ CY C +GH++R+CT+ N N +G CY C + H +RDCP
Sbjct: 147 AMKCYACGKLGHISRDCTAP--NGGPLNTAGKTCYQCSETGHISRDCP 192
>gi|366986513|ref|XP_003673023.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
gi|342298886|emb|CCC66632.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
Length = 161
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 63/130 (48%), Gaps = 26/130 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CYNC GHV ECT R CYNC H ++DCP + NN G
Sbjct: 49 CYNCGETGHVKSECTVQR-----------CYNCNQTGHISKDCPEPRKPREPRNNGRFGA 97
Query: 190 ------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+KCG H+A+DC S +CY+CGK GH++RDC G C+NC
Sbjct: 98 NRHGMTCYKCGEPNHMAKDCPQSES------KCYSCGKFGHMSRDCPDGPK--EKVCYNC 149
Query: 244 GKPGHFAREC 253
+ GH +R+C
Sbjct: 150 NETGHISRDC 159
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 37/139 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C +GH+A +C S + CYNC P H +CP + +
Sbjct: 5 ACFVCGKIGHLAEDCDSEKL----------CYNCNKPGHVQSECPEPRTVEHK------Q 48
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA-------------GGAGG 236
C+ CG GH+ +C + RCYNC ++GH+++DC G
Sbjct: 49 CYNCGETGHVKSECTVQ--------RCYNCNQTGHISKDCPEPRKPREPRNNGRFGANRH 100
Query: 237 GGSCFNCGKPGHFARECTK 255
G +C+ CG+P H A++C +
Sbjct: 101 GMTCYKCGEPNHMAKDCPQ 119
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 118 RNNGG-GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
RNNG G G+ CY C H+A++C + CY+CG H +RDCP
Sbjct: 90 RNNGRFGANRHGMTCYKCGEPNHMAKDCPQ---------SESKCYSCGKFGHMSRDCP-- 138
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDC 203
G C+ C GH++RDC
Sbjct: 139 DGPKEKV------CYNCNETGHISRDC 159
>gi|212534810|ref|XP_002147561.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
marneffei ATCC 18224]
gi|210069960|gb|EEA24050.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
marneffei ATCC 18224]
Length = 459
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ C NC VGH AR+CT R + C NCG P+H A DC + N +
Sbjct: 289 IKCVNCSEVGHRARDCTKQRE----QRDKFACRNCGSPDHKAVDC------TEPPNLDHI 338
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C +C GH A+DC + C CG HL+RDCG +C NC + GH
Sbjct: 339 ECRRCNQNGHFAKDC---PNAPKFARACRKCGAEDHLSRDCGQQQNMDLITCNNCDETGH 395
Query: 249 FARECTK 255
+AR+C K
Sbjct: 396 YARDCPK 402
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-S 239
Y+ C CG GH+A+ C R +C NC + GH ARDC +
Sbjct: 256 EYDRLIPKCVNCGELGHIAKSCKQERTMIERVEIKCVNCSEVGHRARDCTKQREQRDKFA 315
Query: 240 CFNCGKPGHFARECTKVAN 258
C NCG P H A +CT+ N
Sbjct: 316 CRNCGSPDHKAVDCTEPPN 334
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 160 CYNCGDPEHFARDCPR-QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C NCG HFAR+CP +QGG SG CF CG GH DC G C
Sbjct: 46 CRNCGHSGHFARECPEPRQGG-------SGACFNCGEEGHNKVDC---PHPRVFQGTCRV 95
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C + GH A +C A C NC GH EC +
Sbjct: 96 CNEEGHPASECPQKPA---DICKNCRGEGHKTSECNE 129
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
SG C NCG SGH AR+C GG G+CFNCG+ GH +C
Sbjct: 38 SGHPRDDICRNCGHSGHFARECPEPRQGGSGACFNCGEEGHNKVDC 83
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
GG +S + C CG GH AR+C GG G C+NCG+ GH DC
Sbjct: 34 GGDDSGHPRDDICRNCGHSGHFARECPEPRQGGSGA--CFNCGEEGHNKVDCPHPRV-FQ 90
Query: 238 GSCFNCGKPGHFARECTK 255
G+C C + GH A EC +
Sbjct: 91 GTCRVCNEEGHPASECPQ 108
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C NC GH AREC R+ SG C+NCG+ H DCP +
Sbjct: 41 PRDDICRNCGHSGHFARECPEPRQGG-----SGACFNCGEEGHNKVDCPHPRVF------ 89
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
G C C GH A +C + + C NC GH +C
Sbjct: 90 -QGTCRVCNEEGHPASECPQKPADI-----CKNCRGEGHKTSEC 127
>gi|66800555|ref|XP_629203.1| hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
gi|60462584|gb|EAL60788.1| hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
Length = 131
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C VGH++R C N + CY C H +R+CP Q + C
Sbjct: 9 CYKCKEVGHISRNCPKNPEAGDR-----ACYVCNVVGHLSRECP-QNPQPTFEKKDPIKC 62
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG----SCFNCGKP 246
++C G+GH ARDC G +CYNCG GH+++DC + G G C+ C +P
Sbjct: 63 YQCNGFGHFARDCRR-----GRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQP 117
Query: 247 GHFARECTK 255
GH A+ C +
Sbjct: 118 GHIAKACPE 126
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CY C+ VGH++REC N + + + CY C HFARDC R G N
Sbjct: 29 GDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGFGHFARDCRR--GRDNK---- 82
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGG--GGRCYNCGKSGHLARDC 229
C+ CGG GH+++DC + + G G +CY C + GH+A+ C
Sbjct: 83 ---CYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIAKAC 124
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 20/70 (28%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYN--------------------NNSGGCYNCGDPEH 168
+ CY C+G GH AR+C R N YN ++ CY C P H
Sbjct: 60 IKCYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGH 119
Query: 169 FARDCPRQQG 178
A+ CP Q
Sbjct: 120 IAKACPENQS 129
>gi|67537882|ref|XP_662715.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
gi|40743102|gb|EAA62292.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
Length = 176
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNS 182
P CY C VGH++REC N +GG CY CG H AR+C +
Sbjct: 50 APKEKSCYRCGAVGHISRECPQAGEN---ERPAGGQECYKCGRVGHIARNCSQGGSYGGG 106
Query: 183 YNNNSGG----CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
+ GG C+ CGG+GH+ARDC G +CYNCG++GH++RDC A G
Sbjct: 107 FGGGYGGRQQTCYSCGGFGHMARDCTQ-------GQKCYNCGETGHVSRDCPT-EAKGER 158
Query: 239 SCFNCGKPGHFAREC 253
C+ C +PGH C
Sbjct: 159 VCYQCKQPGHIQSAC 173
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 72/159 (45%), Gaps = 34/159 (21%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYN-------------------NNSGGCYNCGDPE 167
GG VC+NC H AR+C + YN CY CG
Sbjct: 4 GGRVCFNCGEATHQARDCPKKGTPTCYNCGVLDRLGQGHVSRECTVAPKEKSCYRCGAVG 63
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG--------RCYNC 219
H +R+CP Q G N C+KCG GH+AR+C GS GGG G CY+C
Sbjct: 64 HISRECP--QAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSC 121
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 122 GGFGHMARDCTQ-----GQKCYNCGETGHVSRDCPTEAK 155
>gi|321468514|gb|EFX79498.1| hypothetical protein DAPPUDRAFT_52316 [Daphnia pulex]
Length = 147
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 34/180 (18%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G+ WF+ KG+GFI PDDG D+FVHQ I+ +G+R L E + VE + + +AD +A
Sbjct: 1 GRCKWFNVTKGWGFITPDDGSPDVFVHQSVIRMNGFRNLAEGEEVEMETK-DADKGAEAT 59
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGG 128
VT PGG S + + R F +
Sbjct: 60 VVTGPGGTECRGS------HRQARKPTKTKRIRLNKLFVHIQR----------------- 96
Query: 129 VVCYNCDGVG-HVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
CYNC VG H+A +CT C+ C +H DCP + S S +
Sbjct: 97 --CYNCGAVGSHIAPKCT-------VGPQPKRCHQCKSEDHLISDCPNKLKKSRSSQTET 147
>gi|254584670|ref|XP_002497903.1| ZYRO0F16148p [Zygosaccharomyces rouxii]
gi|186703710|emb|CAQ43401.1| Zinc finger protein GIS2 [Zygosaccharomyces rouxii]
gi|238940796|emb|CAR28970.1| ZYRO0F16148p [Zygosaccharomyces rouxii]
Length = 161
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 25/129 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ------GGSNSYN 184
CYNC GHV ECT R CYNC H +R+CP + G+ +
Sbjct: 49 CYNCGETGHVKTECTVQR-----------CYNCNQTGHISRECPEPKKSRFASAGAPTGG 97
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
C++CGG H+A+DC+ GS +CY+CGK GHL+++C +G G C+NC
Sbjct: 98 KPKVSCYRCGGPNHMAKDCLQSGS------KCYSCGKFGHLSKECPSG--PGEKICYNCN 149
Query: 245 KPGHFAREC 253
GH +++C
Sbjct: 150 GSGHISKDC 158
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLA +C + CYNC K GH+ +C C+NCG+ GH
Sbjct: 5 ACYVCGKIGHLAEECDSER-------LCYNCNKPGHVQSECTLPRTVEFKQCYNCGETGH 57
Query: 249 FARECT 254
ECT
Sbjct: 58 VKTECT 63
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CY C G H+A++C + CY+CG H +++CP G YN
Sbjct: 101 VSCYRCGGPNHMAKDCL---------QSGSKCYSCGKFGHLSKECPSGPGEKICYN---- 147
Query: 189 GCFKCGGYGHLARDC 203
C G GH+++DC
Sbjct: 148 ----CNGSGHISKDC 158
>gi|225427758|ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 258
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+NC GH+A ECT+ C+NC +P H A +CP
Sbjct: 69 PNVAVCHNCSLPGHIASECTTR----------SLCWNCQEPGHTASNCP----------- 107
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GHLARDC G C NC K GH+A DC A C NC K
Sbjct: 108 NEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKA-----CNNCRK 162
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 163 TGHLARDC 170
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
RR++ G+ G + C NC GH AREC N C+NC P H A +C
Sbjct: 42 RRDSRRGFSQGNL-CKNCKRPGHYARECP----------NVAVCHNCSLPGHIASEC--- 87
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
C+ C GH A +C G C+ CGK+GHLARDC A
Sbjct: 88 --------TTRSLCWNCQEPGHTASNCPNEGI-------CHTCGKTGHLARDCSAPPVPP 132
Query: 237 GGS--CFNCGKPGHFARECT 254
G C NC K GH A +CT
Sbjct: 133 GDLRLCNNCYKQGHIAADCT 152
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ------GGSNSY 183
C NC GH+AR+C N C C H AR CP+ GG S
Sbjct: 156 ACNNCRKTGHLARDC----------RNDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSS 205
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C C GH++RDC C NCG GH+A +C +G
Sbjct: 206 GFRDIVCRNCQQLGHMSRDC------AAPLMICRNCGGRGHMAFECPSG 248
>gi|358390183|gb|EHK39589.1| hypothetical protein TRIATDRAFT_302941 [Trichoderma atroviride IMI
206040]
Length = 176
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 48/162 (29%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG------S 180
G CYNC G GH++R+CT +++ CY CG P H +RDCP+ +
Sbjct: 26 GPAKCYNCGGEGHLSRDCTEPMKDNK------SCYKCGQPGHISRDCPQAGAAGGGQAGT 79
Query: 181 NSYNNNSGG-----------------------------CFKCGGYGHLARDCITRGSGGG 211
Y G C+ CGGYGH++R+C+
Sbjct: 80 ECYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCYSCGGYGHMSRECVN------ 133
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G +CYNCG+SGH +RDC AGG C+ C + GH +C
Sbjct: 134 -GMKCYNCGESGHYSRDCPKEAAGGEKICYKCQQGGHVQAQC 174
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 74/160 (46%), Gaps = 34/160 (21%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYN---------------NNSGGCYNCGDPEH 168
Y P G CY+C GH AR+C + YN ++ CY CG P H
Sbjct: 3 YAPRGA-CYSCGNAGHQARDCPTKGPAKCYNCGGEGHLSRDCTEPMKDNKSCYKCGQPGH 61
Query: 169 FARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-----------SGGGGGGRCY 217
+RDCP+ C+KCG GH+AR C G GGG G CY
Sbjct: 62 ISRDCPQAGAAGGGQAGTE--CYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCY 119
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
+CG GH++R+C G C+NCG+ GH++R+C K A
Sbjct: 120 SCGGYGHMSREC-----VNGMKCYNCGESGHYSRDCPKEA 154
>gi|255931619|ref|XP_002557366.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581985|emb|CAP80146.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 182
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 28/141 (19%)
Query: 132 YNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCF 191
YNC+G GH++REC + + CY CG H +R+CP QGG ++Y S C+
Sbjct: 36 YNCNGQGHLSRECQEPAKEKS-------CYRCGQTGHLSRECP--QGGDSNYGGGSQECY 86
Query: 192 KCGGYGHLARDCITRGSGGGGGG--------------RCYNCGKSGHLARDCGAGGAGGG 237
KCG GH+AR+C G+ GG CY+CG GH+ARDC G
Sbjct: 87 KCGQVGHIARNCSQGGNYGGYSAGGYGGFGGAGGRQQTCYSCGGFGHMARDCTQ-----G 141
Query: 238 GSCFNCGKPGHFARECTKVAN 258
C+NCG+ GH +R+C A
Sbjct: 142 QKCYNCGEVGHVSRDCPTEAK 162
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C GH++REC +SNY S CY CG H AR+C + GG
Sbjct: 57 CYRCGQTGHLSRECPQGG-DSNYGGGSQECYKCGQVGHIARNCSQGGNYGGYSAGGYGGF 115
Query: 190 ---------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
C+ CGG+GH+ARDC G +CYNCG+ GH++RDC A G C
Sbjct: 116 GGAGGRQQTCYSCGGFGHMARDCTQ-------GQKCYNCGEVGHVSRDCPT-EAKGERMC 167
Query: 241 FNCGKPGHFAREC 253
+ C +PGH C
Sbjct: 168 YKCKQPGHVQSAC 180
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 18/104 (17%)
Query: 158 GGCYNCGDPEHFARDCPRQ--QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
GGC+NCG+ H A+DCP++ NSYN C G GHL+R+C
Sbjct: 9 GGCFNCGEASHQAKDCPKKGNPTCPNSYN--------CNGQGHLSRECQEPAKEKS---- 56
Query: 216 CYNCGKSGHLARDCGAGG----AGGGGSCFNCGKPGHFARECTK 255
CY CG++GHL+R+C GG GG C+ CG+ GH AR C++
Sbjct: 57 CYRCGQTGHLSRECPQGGDSNYGGGSQECYKCGQVGHIARNCSQ 100
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 17/74 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH+AR+CT ++ CYNCG+ H +RDCP + G
Sbjct: 124 TCYSCGGFGHMARDCTQGQK----------CYNCGEVGHVSRDCPTEAKGERM------- 166
Query: 190 CFKCGGYGHLARDC 203
C+KC GH+ C
Sbjct: 167 CYKCKQPGHVQSAC 180
>gi|15229170|ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis thaliana]
gi|17529084|gb|AAL38752.1| unknown protein [Arabidopsis thaliana]
gi|22136980|gb|AAM91719.1| unknown protein [Arabidopsis thaliana]
gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 372
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNS--GGCYNCGDPEHFARDC------PRQQGG 179
G CY C GH AR+CT + S G C+ CG P H++RDC P+ + G
Sbjct: 236 GTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSGNPKYEPG 295
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGS----------GGGGGGRCYNCGKSGHLARDC 229
+++SG C+KCG GH +RDC + S G CY CGK+GH +RDC
Sbjct: 296 QMKSSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYKCGKAGHWSRDC 355
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 160 CYNCGDPEHFARDCPRQQ-GGSNSYNNNSGGCFKCGGYGHLARDCITRG----------S 208
CY CG H+ARDC Q G + +G CFKCG GH +RDC +
Sbjct: 239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSGNPKYEPGQMK 298
Query: 209 GGGGGGRCYNCGKSGHLARDCG------------AGGAGGGGSCFNCGKPGHFARECTKV 256
G CY CGK GH +RDC A G C+ CGK GH++R+CT
Sbjct: 299 SSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYKCGKAGHWSRDCTSP 358
Query: 257 AN 258
A
Sbjct: 359 AQ 360
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 213 GGRCYNCGKSGHLARDCGAGGAGG-------GGSCFNCGKPGHFARECT 254
G CY CGK GH ARDC G G CF CGKPGH++R+CT
Sbjct: 236 GTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCT 284
>gi|396496524|ref|XP_003844764.1| hypothetical protein LEMA_P000720.1 [Leptosphaeria maculans JN3]
gi|312221345|emb|CBY01285.1| hypothetical protein LEMA_P000720.1 [Leptosphaeria maculans JN3]
Length = 622
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 21/234 (8%)
Query: 23 IRPDDGGADLFVHQKSIKSD-GYRTLYENQSVEFDVQLEADGKYQALDVTAPGGAPVHSS 81
+R D+ G L + + ++ L N ++ + + K + + + G P
Sbjct: 344 LREDNKGIYLIAKPQELAANLTIVDLVGNPDRDYVLSFQKFAKPRRVKMAE--GWPASPE 401
Query: 82 KNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVA 141
+N +++G+ +RG G G G+ + + + + P + C NC +GH A
Sbjct: 402 ENMVRLSSAGFVEDRGVPLCGNCGELGHVRKHCKQEQPERQSHQPE-ITCVNCHEIGHRA 460
Query: 142 RECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLAR 201
R+C R N + C NC H ++DCP + C KC GH ++
Sbjct: 461 RDCNKERLNPH------ACRNCKKDGHNSKDCPEPRSAEGV------ECRKCMQTGHFSK 508
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
DC C NC + H+A+DC C NC GHF+R+C K
Sbjct: 509 DC-----PNVAARTCRNCDSTEHIAKDCDQPKNPDKTQCRNCDLTGHFSRDCPK 557
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 113 NNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
N R ++ G GV +C NC +GHV + C + + C NC + H AR
Sbjct: 402 ENMVRLSSAGFVEDRGVPLCGNCGELGHVRKHCKQEQPERQSHQPEITCVNCHEIGHRAR 461
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC N N C C GH ++DC S G C C ++GH ++DC
Sbjct: 462 DC-------NKERLNPHACRNCKKDGHNSKDCPEPRSAEGV--ECRKCMQTGHFSKDCPN 512
Query: 232 GGAGGGGSCFNCGKPGHFARECTKVAN 258
A +C NC H A++C + N
Sbjct: 513 VAAR---TCRNCDSTEHIAKDCDQPKN 536
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C C HFARDCP G +G C+ CG GH DC G C C
Sbjct: 202 CRVCHQTGHFARDCPEAPAGGGL----TGECYNCGEVGHNKADCTNPRVERAFTGTCNGC 257
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G GH RDC + C C +PGH A EC
Sbjct: 258 GVEGHTIRDCPSQ------KCKLCDQPGHRALEC 285
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C NCD H+A++C + N + C NC HF+RDCP+ + S
Sbjct: 517 TCRNCDSTEHIAKDCDQPK-----NPDKTQCRNCDLTGHFSRDCPKPRDYSRV------K 565
Query: 190 CFKCGGYGHLARDC 203
C CG GH + C
Sbjct: 566 CSNCGDMGHTIKRC 579
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 216 CYNCGKSGHLARDCGAGGAGGG--GSCFNCGKPGHFARECT 254
C C ++GH ARDC AGGG G C+NCG+ GH +CT
Sbjct: 202 CRVCHQTGHFARDCPEAPAGGGLTGECYNCGEVGHNKADCT 242
>gi|6324074|ref|NP_014144.1| Gis2p [Saccharomyces cerevisiae S288c]
gi|1730843|sp|P53849.1|GIS2_YEAST RecName: Full=Zinc finger protein GIS2
gi|1255963|emb|CAA65489.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1302303|emb|CAA96162.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269894|gb|AAS56328.1| YNL255C [Saccharomyces cerevisiae]
gi|151944292|gb|EDN62570.1| gig suppressor [Saccharomyces cerevisiae YJM789]
gi|190409228|gb|EDV12493.1| zinc-finger protein GIS2 [Saccharomyces cerevisiae RM11-1a]
gi|256272390|gb|EEU07373.1| Gis2p [Saccharomyces cerevisiae JAY291]
gi|285814410|tpg|DAA10304.1| TPA: Gis2p [Saccharomyces cerevisiae S288c]
gi|323303323|gb|EGA57119.1| Gis2p [Saccharomyces cerevisiae FostersB]
gi|323307479|gb|EGA60750.1| Gis2p [Saccharomyces cerevisiae FostersO]
gi|323335863|gb|EGA77141.1| Gis2p [Saccharomyces cerevisiae Vin13]
gi|349580694|dbj|GAA25853.1| K7_Gis2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297096|gb|EIW08197.1| Gis2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 23/139 (16%)
Query: 130 VCYNCDGVGHVARECTSNRR---NSNYNNNSGG----------CYNCGDPEHFARDCPRQ 176
+CYNC+ GHV +CT R YN G C+NC H +R+CP
Sbjct: 24 LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQRCFNCNQTGHISRECPEP 83
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ S + C+KCGG H+A+DC+ G G +CY CG++GH++RDC
Sbjct: 84 KKTSRF---SKVSCYKCGGPNHMAKDCM--KEDGISGLKCYTCGQAGHMSRDC-----QN 133
Query: 237 GGSCFNCGKPGHFARECTK 255
C+NC + GH +++C K
Sbjct: 134 DRLCYNCNETGHISKDCPK 152
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 23/136 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSG 188
CY C +GH+A +C S R CYNC P H DC PR YN
Sbjct: 6 CYVCGKIGHLAEDCDSERL----------CYNCNKPGHVQTDCTMPRTVEFKQCYNCGET 55
Query: 189 G----------CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G CF C GH++R+C + + CY CG H+A+DC G
Sbjct: 56 GHVRSECTVQRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISG 115
Query: 238 GSCFNCGKPGHFAREC 253
C+ CG+ GH +R+C
Sbjct: 116 LKCYTCGQAGHMSRDC 131
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CGK GHLA DC + C+NC KPGH +CT
Sbjct: 6 CYVCGKIGHLAEDCDSERL-----CYNCNKPGHVQTDCT 39
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
G G+ CY C GH++R+C ++R CYNC + H ++DCP+
Sbjct: 112 GISGLKCYTCGQAGHMSRDCQNDRL----------CYNCNETGHISKDCPK 152
>gi|209877068|ref|XP_002139976.1| cold-shock DNA-binding domain-containing protein [Cryptosporidium
muris RN66]
gi|209555582|gb|EEA05627.1| cold-shock DNA-binding domain-containing protein [Cryptosporidium
muris RN66]
Length = 119
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 13 WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVTA 72
WFD AKG+GFI PDDG D+FVHQ++IK +G+R+L + + VE++V+ + G+ +A++V
Sbjct: 9 WFDSAKGFGFITPDDGSEDIFVHQQNIKVEGFRSLGQAERVEYEVETDDKGRRKAVNVCG 68
Query: 73 PGGAPV 78
P GA V
Sbjct: 69 PNGAAV 74
>gi|119196333|ref|XP_001248770.1| hypothetical protein CIMG_02541 [Coccidioides immitis RS]
Length = 300
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 147 NRRNSNYNNNSGGCYNCGDPEH---------FARDCPRQQGGSNSYN---------NNSG 188
RR Y GC+ CGD H ARDCP++ G YN
Sbjct: 122 TRRKMEYQ---AGCFTCGDSAHQVNMMRAPFVARDCPKK-GSVICYNCGGRDCNEPAKEK 177
Query: 189 GCFKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGHLARDCGAGGAGG---GGSCFNCG 244
C++CG GH++RDC G SGG G CY CG+ GH++R+C GG G G C+ CG
Sbjct: 178 SCYRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCG 237
Query: 245 KPGHFAREC 253
+ GH +R C
Sbjct: 238 QVGHISRNC 246
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 25/136 (18%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQGGSNSYN 184
G V+CYNC G R+ N CY CG H +RDCP+ + GG+
Sbjct: 158 GSVICYNCGG------------RDCNEPAKEKSCYRCGLTGHISRDCPQAGESGGARGQE 205
Query: 185 NNSGGCFKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C+KCG GH++R+C G SG G CY CG+ GH++R+CG GG
Sbjct: 206 -----CYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNCGQYSGYNGGGYNAG 260
Query: 244 -----GKPGHFARECT 254
G+ GH +R+CT
Sbjct: 261 SYRYGGETGHVSRDCT 276
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
G G CY C VGH++REC + CY CG H +R+C Q +
Sbjct: 200 GARGQECYKCGQVGHISRECPQGGESGEARGQE--CYKCGQVGHISRNC--GQYSGYNGG 255
Query: 185 NNSGGCFKCGG-YGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ G ++ GG GH++RDC T G G CY C + GH+ C
Sbjct: 256 GYNAGSYRYGGETGHVSRDCTTEGKGERV---CYKCKQPGHVQAAC 298
>gi|67968237|dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH +REC + C+ CG+ HF+R+CP Q GG S C
Sbjct: 168 CHKCGEEGHFSRECPQAGGGGGSGPRT--CHKCGEEGHFSRECP-QGGGGGGGGGGSRAC 224
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
KCG GH +R+C G GGG G R C+ CG+ GH++RDC GG GG G CF C + GH
Sbjct: 225 HKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEEGHMSRDCPQGGGGGDGKCFKCHEAGHT 284
Query: 250 AREC 253
+++C
Sbjct: 285 SKDC 288
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGG---SCFNCGKPGHFARECTK 255
GGG C+ CG+ GH+AR+C GG GGGG +C CG+ GHF+REC +
Sbjct: 136 GGGRPCHKCGEEGHMARECPKGGGGGGGGSRACHKCGEEGHFSRECPQ 183
>gi|320040571|gb|EFW22504.1| zinc knuckle protein [Coccidioides posadasii str. Silveira]
gi|392862016|gb|EAS37384.2| zinc knuckle domain-containing protein [Coccidioides immitis RS]
Length = 199
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 29/146 (19%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQGGSNSYN 184
G V+CYNC G GHV+R+C + + CY CG H +RDCP+ + GG+
Sbjct: 24 GSVICYNCGGEGHVSRDCNEPAKEKS-------CYRCGLTGHISRDCPQAGESGGARGQE 76
Query: 185 NNSGGCFKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGHLARDCGAGGAGGGG----- 238
C+KCG GH++R+C G SG G CY CG+ GH++R+CG GG
Sbjct: 77 -----CYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNCGQYSGYNGGGYNAG 131
Query: 239 ---------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 132 SYRYGNRPLTCYSCGGYGHRARDCTQ 157
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--------Q 176
G G CY C VGH++REC + CY CG H +R+C +
Sbjct: 71 GARGQECYKCGQVGHISRECPQGGESGEARGQE--CYKCGQVGHISRNCGQYSGYNGGGY 128
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
GS Y N C+ CGGYGH ARDC G +CYNCG++GH++RDC G G
Sbjct: 129 NAGSYRYGNRPLTCYSCGGYGHRARDCTQ-------GQKCYNCGETGHVSRDCTTEGK-G 180
Query: 237 GGSCFNCGKPGHFAREC 253
C+ C +PGH C
Sbjct: 181 ERVCYKCKQPGHVQAAC 197
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C H AR+C S CYNCG H +RDC + C
Sbjct: 7 CFTCGDSAHQARDCP--------KKGSVICYNCGGEGHVSRDC--------NEPAKEKSC 50
Query: 191 FKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGHLARDCGAGGAGG---GGSCFNCGKP 246
++CG GH++RDC G SGG G CY CG+ GH++R+C GG G G C+ CG+
Sbjct: 51 YRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCGQV 110
Query: 247 GHFAREC 253
GH +R C
Sbjct: 111 GHISRNC 117
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
C+ CG S H ARDC G+ C+NCG GH +R+C + A
Sbjct: 7 CFTCGDSAHQARDCPKKGSV---ICYNCGGEGHVSRDCNEPAK 46
>gi|358365333|dbj|GAA81955.1| zinc knuckle transcription factor [Aspergillus kawachii IFO 4308]
Length = 489
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C NC GH AR+C RR N C NCG +H A +CP + N
Sbjct: 297 GVKCVNCSADGHRARDCPEPRR------NVFACRNCGSEDHKASECPNPRSAENVE---- 346
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C +C GH A+DC + C NCG H+A++C +C NC + G
Sbjct: 347 --CKRCNEMGHFAKDCPQKPPPRT----CRNCGSEDHVAKECDKPRDVSTVTCRNCDEVG 400
Query: 248 HFARECTK 255
HF+R+C K
Sbjct: 401 HFSRDCPK 408
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P C NC HVA+EC R S C NC + HF+RDCP+++ S N
Sbjct: 364 PPPRTCRNCGSEDHVAKECDKPRDVSTVT-----CRNCDEVGHFSRDCPKKRDYSRVKCN 418
Query: 186 NSGGCFKCGGYGHLARDCIT 205
N CG GH + C T
Sbjct: 419 N------CGEMGHTIKRCPT 432
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NCG HFAR+CP + CF CG GH +C G C C
Sbjct: 59 CRNCGSDGHFARNCPEPR--------KDIACFNCGEDGHNKSECTKPRIFKGA---CRIC 107
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
K GH A +C C NC GH +C +
Sbjct: 108 NKEGHPAAECPEKAP---DVCKNCKMEGHKTMDCKE 140
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G G RC NCG GH AR+C +CFNCG+ GH ECTK
Sbjct: 51 EGHGDDNRCRNCGSDGHFARNCPE--PRKDIACFNCGEDGHNKSECTK 96
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
Y+ C NCG H R C + C C GH ARDC
Sbjct: 266 YDRQVPKCNNCGALGHTFRGC---KEEREERERVGVKCVNCSADGHRARDCPEPRRNVFA 322
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C NCG H A +C + C C + GHFA++C +
Sbjct: 323 ---CRNCGSEDHKASECPNPRSAENVECKRCNEMGHFAKDCPQ 362
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C CG GH AR+C C+NCG+ GH +C G +C C K GH
Sbjct: 59 CRNCGSDGHFARNCPEPRKDIA----CFNCGEDGHNKSECTKPRIFKG-ACRICNKEGHP 113
Query: 250 ARECTKVA 257
A EC + A
Sbjct: 114 AAECPEKA 121
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
V C NCD VGH +R+C R S C NCG+ H + CP ++ +++S
Sbjct: 391 VTCRNCDEVGHFSRDCPKKRDYSRVK-----CNNCGEMGHTIKRCPTANATEDAPHDDS 444
>gi|148666815|gb|EDK99231.1| cellular nucleic acid binding protein, isoform CRA_d [Mus musculus]
Length = 204
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 100 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 145
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 146 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 194
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 195 ARECTIEAT 203
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 36 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 95
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 96 LQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 138
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 40 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 99
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 100 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 144
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 145 KCYSCGEFGHIQKDCTKV 162
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 80 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 124
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 125 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCT------KVKCYRCGETGHV 173
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 174 AINCSKTSE 182
>gi|212538011|ref|XP_002149161.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
gi|210068903|gb|EEA22994.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
Length = 183
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 75/151 (49%), Gaps = 33/151 (21%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + + CY CG H +RDC QQ NN
Sbjct: 27 GTPTCYNCGGQGHVSRECTQAPKEKS-------CYRCGQTGHISRDC--QQSAPAGGNNG 77
Query: 187 SGG------------CFKCGGYGHLARDCITRGSGGGGGG-------RCYNCGKSGHLAR 227
C+KCG GH+AR+C GS GGG G CY+CG GH+AR
Sbjct: 78 GFSRGGFSGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQTCYSCGGYGHMAR 137
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
DC G C+NCG+ GH +R+CT AN
Sbjct: 138 DCTQ-----GQKCYNCGEVGHVSRDCTTEAN 163
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 68/136 (50%), Gaps = 38/136 (27%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYGHLARD 202
S GC+NCG+P H ARDCP++ G YN C++CG GH++RD
Sbjct: 7 SRGCFNCGEPSHQARDCPKK-GTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRD 65
Query: 203 CITRGSGGG--------------GGGRCYNCGKSGHLARDCGAGGAGGGG---------S 239
C GG GG CY CG+ GH+AR+C GG+ GGG +
Sbjct: 66 CQQSAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQT 125
Query: 240 CFNCGKPGHFARECTK 255
C++CG GH AR+CT+
Sbjct: 126 CYSCGGYGHMARDCTQ 141
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 55/123 (44%), Gaps = 34/123 (27%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C VGH+AR C+ + GG RQQ C
Sbjct: 93 CYKCGQVGHIARNCSQGGSYGGGHGGFGG---------------RQQ-----------TC 126
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGGYGH+ARDC G +CYNCG+ GH++RDC A G C+ C +PGH
Sbjct: 127 YSCGGYGHMARDCTQ-------GQKCYNCGEVGHVSRDC-TTEANGERVCYKCKQPGHVQ 178
Query: 251 REC 253
C
Sbjct: 179 SAC 181
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 38/155 (24%)
Query: 79 HSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVG 138
H S++ + +G GNN G G GG CY C VG
Sbjct: 61 HISRDCQQSAPAG--------------------GNNGGFSRGGFSGGAGGQECYKCGQVG 100
Query: 139 HVARECTSNRRNSNYNNNSGG----CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCG 194
H+AR C+ + GG CY+CG H ARDC + Q C+ CG
Sbjct: 101 HIARNCSQGGSYGGGHGGFGGRQQTCYSCGGYGHMARDCTQGQ-----------KCYNCG 149
Query: 195 GYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
GH++RDC T + G CY C + GH+ C
Sbjct: 150 EVGHVSRDCTTEAN---GERVCYKCKQPGHVQSAC 181
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
G CYNC VGHV+R+CT+ N CY C P H CP
Sbjct: 142 GQKCYNCGEVGHVSRDCTTE------ANGERVCYKCKQPGHVQSACP 182
>gi|227202808|dbj|BAH56877.1| AT4G38680 [Arabidopsis thaliana]
Length = 204
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 56/74 (75%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI PDDGG DLFVHQ SI+S+G+R+L ++VEF+V+++ + +
Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNRP 69
Query: 66 QALDVTAPGGAPVH 79
+A+DV+ P GAPV
Sbjct: 70 KAIDVSGPDGAPVQ 83
>gi|340914996|gb|EGS18337.1| DNA-binding protein hexbp-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 165
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 47/169 (27%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYN---------NNSGGCYNCGDPEHFARDCP 174
+ G C+ C H AR+C + YN ++ CY CG P H +RDCP
Sbjct: 3 FAASGQACFTCGQTTHKARDCPNKAAAKCYNCGRDCPEGPKDTKTCYRCGQPGHISRDCP 62
Query: 175 RQ----QGGSNSY----------NNNSGG----------------CFKCGGYGHLARDCI 204
Q G+ Y N N G C+ CGG GHL+RDC+
Sbjct: 63 TTGGSGQSGAECYKCGEIGHIARNCNKGAPYGGFNGGYGGYGQKTCYSCGGIGHLSRDCV 122
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G +CYNCG SGHL+R+C +GG C+ C +PGH +C
Sbjct: 123 N-------GNKCYNCGVSGHLSREC-PKESGGEKICYKCQQPGHVQSQC 163
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 20/99 (20%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C+ CG H ARDCP N + C+ CG RDC G CY
Sbjct: 9 ACFTCGQTTHKARDCP---------NKAAAKCYNCG------RDCP---EGPKDTKTCYR 50
Query: 219 CGKSGHLARDCGAGGAGG--GGSCFNCGKPGHFARECTK 255
CG+ GH++RDC G G G C+ CG+ GH AR C K
Sbjct: 51 CGQPGHISRDCPTTGGSGQSGAECYKCGEIGHIARNCNK 89
>gi|431913718|gb|ELK15208.1| Cellular nucleic acid-binding protein [Pteropus alecto]
Length = 189
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 85 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 130
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 131 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 179
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 180 ARECTIEAT 188
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 24/116 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 14 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 73
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 74 HLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 123
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 18 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 77
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 78 DCDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 125
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 126 ADE---QKCYSCGEFGHIQKDCTKV 147
>gi|259149113|emb|CAY82355.1| Gis2p [Saccharomyces cerevisiae EC1118]
gi|365763461|gb|EHN04989.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 23/139 (16%)
Query: 130 VCYNCDGVGHVARECTSNRR---NSNYNNNSGG----------CYNCGDPEHFARDCPRQ 176
+CYNC+ GHV +CT R YN G C+NC H +R+CP
Sbjct: 24 LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGEIGHVRSECTVQRCFNCNQTGHISRECPEP 83
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ S + C+KCGG H+A+DC+ G G +CY CG++GH++RDC
Sbjct: 84 KKTSRF---SKVSCYKCGGPNHMAKDCM--KEDGISGLKCYTCGQAGHMSRDC-----QN 133
Query: 237 GGSCFNCGKPGHFARECTK 255
C+NC + GH +++C K
Sbjct: 134 DRLCYNCNETGHISKDCPK 152
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 23/136 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSG 188
CY C +GH+A +C S R CYNC P H DC PR YN
Sbjct: 6 CYVCGKIGHLAEDCDSERL----------CYNCNKPGHVQTDCTMPRTVEFKQCYNCGEI 55
Query: 189 G----------CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G CF C GH++R+C + + CY CG H+A+DC G
Sbjct: 56 GHVRSECTVQRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISG 115
Query: 238 GSCFNCGKPGHFAREC 253
C+ CG+ GH +R+C
Sbjct: 116 LKCYTCGQAGHMSRDC 131
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CGK GHLA DC + C+NC KPGH +CT
Sbjct: 6 CYVCGKIGHLAEDCDSERL-----CYNCNKPGHVQTDCT 39
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
G G+ CY C GH++R+C ++R CYNC + H ++DCP+
Sbjct: 112 GISGLKCYTCGQAGHMSRDCQNDRL----------CYNCNETGHISKDCPK 152
>gi|327265859|ref|XP_003217725.1| PREDICTED: cellular nucleic acid-binding protein-like [Anolis
carolinensis]
Length = 170
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C RR CYNCG P H ARDC + +
Sbjct: 66 ACYNCGRGGHIAKDCKEPRRE-----REQCCYNCGKPGHLARDCD---------HADEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 161 ARECTIEAT 169
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ--------------QGGSNSYNNNSGGCFKCGGYGHLAR 201
+S C+ CG H+AR+CP Q S+S + C++CG GHLA+
Sbjct: 2 SSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDI---CYRCGESGHLAK 58
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 DCDLQEDA------CYNCGRGGHIAKDCKEPRREREQCCYNCGKPGHLARDC 104
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPRREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC PR++ YN
Sbjct: 46 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPRREREQCCYN--- 93
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 94 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETG 137
Query: 248 HFARECTKVAN 258
H A C+K +
Sbjct: 138 HVAINCSKTSE 148
>gi|331238075|ref|XP_003331693.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310683|gb|EFP87274.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 169
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 32/137 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN----SYNNN 186
CY C GH++R+C+ + N C+ CG+ H++RDCP+ GG + SY+
Sbjct: 48 CYTCGDSGHISRDCSQQKTN---------CFKCGEEGHYSRDCPQAGGGGDQGYQSYSGG 98
Query: 187 SGG---------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G C+ CGG GHL+RDC+ G +C+NCG+ GH++RDC A
Sbjct: 99 RGRGGGGGGSRNCYTCGGVGHLSRDCV-------GDQKCFNCGEVGHVSRDCSRPQA--- 148
Query: 238 GSCFNCGKPGHFARECT 254
+C+ CG+ GH +++C+
Sbjct: 149 KNCYACGQSGHISKDCS 165
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 70/142 (49%), Gaps = 39/142 (27%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC G GH++++C++ + CY CGD H +RDC +Q+ C
Sbjct: 26 CYNCGGEGHISKDCSNPTAPKS-------CYTCGDSGHISRDCSQQKTN----------C 68
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-----------------CYNCGKSGHLARDCGAGG 233
FKCG GH +RDC G GG G + CY CG GHL+RDC
Sbjct: 69 FKCGEEGHYSRDCPQAGGGGDQGYQSYSGGRGRGGGGGGSRNCYTCGGVGHLSRDCV--- 125
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
G CFNCG+ GH +R+C++
Sbjct: 126 --GDQKCFNCGEVGHVSRDCSR 145
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
GCYNCG H A CP+ + + C+ CGG GH+++DC S CY
Sbjct: 4 GCYNCGGGGHLAAACPK---------SGTPSCYNCGGEGHISKDC----SNPTAPKSCYT 50
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CG SGH++RDC +CF CG+ GH++R+C +
Sbjct: 51 CGDSGHISRDCSQQKT----NCFKCGEEGHYSRDCPQA 84
>gi|297744732|emb|CBI37994.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+NC GH+A ECT+ C+NC +P H A +CP
Sbjct: 57 PNVAVCHNCSLPGHIASECTTR----------SLCWNCQEPGHTASNCP----------- 95
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GHLARDC G C NC K GH+A DC A C NC K
Sbjct: 96 NEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKA-----CNNCRK 150
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 151 TGHLARDC 158
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 62/144 (43%), Gaps = 31/144 (21%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
N RR++ G+ G + C NC GH AREC N C+NC P H A +
Sbjct: 26 NAPYRRDSRRGFSQGNL-CKNCKRPGHYARECP----------NVAVCHNCSLPGHIASE 74
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C C+ C GH A +C G C+ CGK+GHLARDC A
Sbjct: 75 C-----------TTRSLCWNCQEPGHTASNCPNEGI-------CHTCGKTGHLARDCSAP 116
Query: 233 GAGGGGS--CFNCGKPGHFARECT 254
G C NC K GH A +CT
Sbjct: 117 PVPPGDLRLCNNCYKQGHIAADCT 140
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ------GGSNSY 183
C NC GH+AR+C N C C H AR CP+ GG S
Sbjct: 144 ACNNCRKTGHLARDC----------RNDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSS 193
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C C GH++RDC C NCG GH+A +C +G
Sbjct: 194 GFRDIVCRNCQQLGHMSRDC------AAPLMICRNCGGRGHMAFECPSG 236
>gi|429848776|gb|ELA24219.1| zinc knuckle domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 220
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGNVGHYAEVCSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGG---------- 237
C+ C G GH+ DC T R SG G GRCYNCG+ GHLAR C G G G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRGAF 112
Query: 238 --------------GSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA 146
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 68/148 (45%), Gaps = 34/148 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------------ 178
CY+C G+GHV +C + R + SG CYNCG P H AR CP G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRG 110
Query: 179 -------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
G + C+KCGG H ARDC + +CY CGK GH+ C A
Sbjct: 111 AFGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAM------KCYACGKLGHI---CTA 161
Query: 232 GGAG----GGGSCFNCGKPGHFARECTK 255
G G +C+ CG+ GH +R+C +
Sbjct: 162 PNGGPLNTAGKTCYQCGEAGHISRDCPQ 189
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 51/129 (39%), Gaps = 37/129 (28%)
Query: 131 CYNCDGVGHVARECT--------------------SNRRNSNYNNNSGGCYNCGDPEHFA 170
CYNC GH+AR C R CY CG P HFA
Sbjct: 80 CYNCGQPGHLARACPNPAGVGIGRGAPVPRGAFGGYGRGGFAGGPRPATCYKCGGPNHFA 139
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGG---GGGRCYNCGKSGHLAR 227
RDC Q + C+ CG GH+ T +GG G CY CG++GH++R
Sbjct: 140 RDCQAQ----------AMKCYACGKLGHI----CTAPNGGPLNTAGKTCYQCGEAGHISR 185
Query: 228 DCGAGGAGG 236
DC A G
Sbjct: 186 DCPQKNANG 194
>gi|255078512|ref|XP_002502836.1| cold-shock protein with RNA binding domain [Micromonas sp. RCC299]
gi|226518102|gb|ACO64094.1| cold-shock protein with RNA binding domain [Micromonas sp. RCC299]
Length = 305
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+ G V WF+ AKG+GF+ DDG D+FVHQ I ++G+R+L + + VEF+++ DG+
Sbjct: 42 VKYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGR 101
Query: 65 YQALDVTAPGGAPVHSSKNNNTNNNSG 91
Y+A+ VT P GA V + N+ G
Sbjct: 102 YKAVKVTGPDGAFVRGALPRNSYRQRG 128
>gi|149036677|gb|EDL91295.1| cellular nucleic acid binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 139
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 104 AGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNC 163
G G+W + G G G CYNC GH+A++C +R CYNC
Sbjct: 9 CGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDCKEPKR-----EREQCCYNC 63
Query: 164 GDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
G P H ARDC + + C+ CG +GH+ +DC +CY CG++G
Sbjct: 64 GKPGHLARDCD---------HADEQKCYSCGEFGHIQKDCTK--------VKCYRCGETG 106
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
H+A +C +C+ CG+ GH ARECT A
Sbjct: 107 HVAINCSKTSE---VNCYRCGESGHLARECTIEAT 138
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
+S C+ CG H+AR+CP G + C+ CG GH+A+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDC--KEPKREREQC 59
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNCGK GHLARDC C++CG+ GH ++CTKV
Sbjct: 60 CYNCGKPGHLARDCDHADE---QKCYSCGEFGHIQKDCTKV 97
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 131 CYNCDGVGHVAREC-TSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
C+ C GH AREC T R + CYNCG H A+DC P+++ YN
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDCKEPKREREQCCYN--- 62
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 63 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETG 106
Query: 248 HFARECTKVAN 258
H A C+K +
Sbjct: 107 HVAINCSKTSE 117
>gi|85098402|ref|XP_960605.1| hypothetical protein NCU08923 [Neurospora crassa OR74A]
gi|28922111|gb|EAA31369.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 183
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 70/144 (48%), Gaps = 30/144 (20%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C+ C H AR+C N + CYNCG+ H +RDCP +N
Sbjct: 9 GTRACFTCGQTTHQARDCP--------NKGAAKCYNCGNEGHMSRDCPE------GPKDN 54
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-------- 238
+ C++CG GH++RDC G G G CY CG+ GH+AR+C GGA GG
Sbjct: 55 ARTCYRCGQTGHISRDCSQSGGGQSSGAECYKCGEVGHIARNCSKGGASYGGGYQNSGYG 114
Query: 239 --------SCFNCGKPGHFARECT 254
+C++CG GH +R+C
Sbjct: 115 GGFGGPQKTCYSCGGIGHMSRDCV 138
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 24/136 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS---YNNN 186
CY C GH++R+C+ + ++ CY CG+ H AR+C + GG++ Y N+
Sbjct: 57 TCYRCGQTGHISRDCSQS---GGGQSSGAECYKCGEVGHIARNCSK--GGASYGGGYQNS 111
Query: 187 SGG---------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
G C+ CGG GH++RDC+ G +CYNCG+SGH +RDC G
Sbjct: 112 GYGGGFGGPQKTCYSCGGIGHMSRDCVN-------GSKCYNCGESGHFSRDCPKDSGSGE 164
Query: 238 GSCFNCGKPGHFAREC 253
C+ C +PGH +C
Sbjct: 165 KICYKCQQPGHVQSQC 180
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CY 217
C+ CG H ARDCP N + C+ CG GH++RDC G R CY
Sbjct: 12 ACFTCGQTTHQARDCP---------NKGAAKCYNCGNEGHMSRDCP---EGPKDNARTCY 59
Query: 218 NCGKSGHLARDCGAGGAGGG--GSCFNCGKPGHFARECTK 255
CG++GH++RDC G G C+ CG+ GH AR C+K
Sbjct: 60 RCGQTGHISRDCSQSGGGQSSGAECYKCGEVGHIARNCSK 99
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G+GH++R+C N CYNCG+ HF+RDCP+ G
Sbjct: 123 TCYSCGGIGHMSRDCV----------NGSKCYNCGESGHFSRDCPKDSGSGEKI------ 166
Query: 190 CFKCGGYGHLARDCIT 205
C+KC GH+ C +
Sbjct: 167 CYKCQQPGHVQSQCPS 182
>gi|71747586|ref|XP_822848.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70832516|gb|EAN78020.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 213
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 115 DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHFAR 171
D N G GG CYNC GH +REC + R G CYNCG P HF+R
Sbjct: 57 DCPSNRGPAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSR 116
Query: 172 DCP--RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARD 228
+CP R + C+ CG GH +R+C G GGGR CY+C + GH+AR+
Sbjct: 117 ECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGNMGGGRACYHCQQEGHIARE 176
Query: 229 C---------GAGGAGGGGSCFNCGKPGHFARECT 254
C G AGGG +C+NCG+PGH +R C
Sbjct: 177 CPNAPADAAAGGAAAGGGRACYNCGQPGHLSRACP 211
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 14/107 (13%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGR-CY 217
C+ CG P HFAR+CP G+ C+ CG HL+RDC + RG GGGR CY
Sbjct: 19 CHRCGQPGHFARECPNVPPGAMG----DRACYTCGQPDHLSRDCPSNRGPAPMGGGRACY 74
Query: 218 NCGKSGHLARDC--------GAGGAGGGGSCFNCGKPGHFARECTKV 256
NCG+ GH +R+C G GGG +C+NCG+PGHF+REC +
Sbjct: 75 NCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNM 121
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 73/142 (51%), Gaps = 19/142 (13%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+ C GH AREC + + + CY CG P+H +RDCP +G +
Sbjct: 15 GGNNCHRCGQPGHFARECPNVPPGAMGDR---ACYTCGQPDHLSRDCPSNRGPAPM--GG 69
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDC--------GAG 232
C+ CG GH +R+C G GG CYNCG+ GH +R+C G
Sbjct: 70 GRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGA 129
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
GGG +C+NCG+PGHF+REC
Sbjct: 130 PMGGGRACYNCGQPGHFSRECP 151
>gi|241022874|ref|XP_002406044.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
gi|215491870|gb|EEC01511.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
Length = 239
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C GH++R+C S + + GC+NCG+ H +RDCP N S G
Sbjct: 19 ACFKCGEEGHMSRDCPSA--GGDGDRPKRGCFNCGEDGHMSRDCP------NPKQERSKG 70
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDC 229
CFKCG GH++RDC T G GG C+ C + GH+A+DC
Sbjct: 71 CFKCGEEGHMSRDCPTAGEGGDSDRPKGCFKCQQEGHMAKDC 112
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 140 VARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHL 199
++REC S + + C+ CG+ H +RDCP G + GCF CG GH+
Sbjct: 1 MSRECPSAD-SGGGRSGGRACFKCGEEGHMSRDCPSAGGDGDRPKR---GCFNCGEDGHM 56
Query: 200 ARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS----CFNCGKPGHFARECTK 255
+RDC G C+ CG+ GH++RDC G GG CF C + GH A++CT
Sbjct: 57 SRDCPNPKQERSKG--CFKCGEEGHMSRDCPTAGEGGDSDRPKGCFKCQQEGHMAKDCTN 114
Query: 256 VA 257
A
Sbjct: 115 EA 116
>gi|45199165|ref|NP_986194.1| AFR646Wp [Ashbya gossypii ATCC 10895]
gi|44985305|gb|AAS54018.1| AFR646Wp [Ashbya gossypii ATCC 10895]
gi|374109427|gb|AEY98333.1| FAFR646Wp [Ashbya gossypii FDAG1]
Length = 163
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 40/171 (23%)
Query: 104 AGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSN---YNN----- 155
G G+ N DS R +CYNC+ GH+ ECT R + YN
Sbjct: 9 CGKLGHLADNCDSER-----------LCYNCNMPGHIQSECTLPRSAEHKQCYNCGETGH 57
Query: 156 -----NSGGCYNCGDPEHFARDCPRQQGGSNSYNN--------NSGGCFKCGGYGHLARD 202
N C+NC H +RDC + S ++ N C++CGG H+A+D
Sbjct: 58 VRGECNIQKCFNCSQAGHVSRDCTEPRRSRFSNSSRSSFSGRLNKVSCYRCGGPNHMAKD 117
Query: 203 CITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C+ + +CY+CGKSGH++RDC +G + +C+NC + GH +R+C
Sbjct: 118 CLQDET------KCYSCGKSGHISRDCPSGPS--EKTCYNCNESGHISRDC 160
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
CY CG H A +C ++ C+ C GH+ +C S +CYN
Sbjct: 5 ACYVCGKLGHLADNC-----------DSERLCYNCNMPGHIQSECTLPRSAEHK--QCYN 51
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CG++GH+ +C CFNC + GH +R+CT+
Sbjct: 52 CGETGHVRGECNIQ------KCFNCSQAGHVSRDCTE 82
>gi|158257670|dbj|BAF84808.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 75 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 120
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 121 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 169
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 170 ARECTIEAT 178
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + + CYNCG H A+DC +
Sbjct: 53 ICYRCGESGHLAKDC-------DLQEDVEACYNCGRGGHIAKDCKEPK------REREQC 99
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 100 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 148
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 149 AINCSKTSE 157
>gi|393245699|gb|EJD53209.1| hypothetical protein AURDEDRAFT_54325 [Auricularia delicata
TFB-10046 SS5]
Length = 177
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS---- 182
G CYNC G GH++R+CT+ ++ + CY C +RDCP G N
Sbjct: 47 GTPTCYNCGGEGHLSRDCTTEQK-------AKACYKC----QLSRDCPDNTGARNGGGPF 95
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGG------GRCYNCGKSGHLARDCGAGGAGG 236
N+S C++CG GH+AR C S GG G R Y CG GHL+RDC
Sbjct: 96 SGNSSAECYRCGKAGHIARACPDAQSSGGYGNFSSSSSRTYTCGGVGHLSRDCTQ----- 150
Query: 237 GGSCFNCGKPGHFAREC 253
G C+NC GH +R+C
Sbjct: 151 GAKCYNCNGSGHISRDC 167
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 35/118 (29%)
Query: 113 NNDSRRNNGGGY-GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
+N RN GG + G CY C GH+AR C + + Y N
Sbjct: 84 DNTGARNGGGPFSGNSSAECYRCGKAGHIARACPDAQSSGGYGN---------------- 127
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
++++S + CGG GHL+RDC G +CYNC SGH++RDC
Sbjct: 128 -----------FSSSSSRTYTCGGVGHLSRDCTQ-------GAKCYNCNGSGHISRDC 167
>gi|148535009|gb|ABQ85432.1| CCHC-type zinc finger [Cricetulus griseus]
Length = 164
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 60 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 105
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 106 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 154
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 155 ARECTIEAT 163
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H A+DC Q+ C+ CG GH+A+DC + CYNC
Sbjct: 40 CYRCGESGHLAKDCDLQE---------DEACYNCGRGGHIAKDC--KEPKREREQCCYNC 88
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK GHLARDC C++CG+ GH ++CTKV
Sbjct: 89 GKPGHLARDCDHADE---QKCYSCGEFGHIQKDCTKV 122
>gi|255954945|ref|XP_002568225.1| Pc21g11940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589936|emb|CAP96091.1| Pc21g11940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 232
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 68/154 (44%), Gaps = 40/154 (25%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGG--------- 179
CYNC G+GHV +C + R N N G CYNC P H AR+C P G
Sbjct: 38 CYNCQGLGHVQADCPTLRLNGGAN---GRCYNCNQPGHLARNCTNPTAAGAGAPPTGPAA 94
Query: 180 ----------------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
S + C+KCGG H ARDC + +CY CGK G
Sbjct: 95 GRGAGARGGFQGGFRGGFSGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLG 148
Query: 224 HLARDCGAGGAG----GGGSCFNCGKPGHFAREC 253
H++RDC A G G C+ C + GH +R+C
Sbjct: 149 HISRDCTAPNGGPLSSAGKVCYKCAQAGHISRDC 182
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 62/159 (38%), Gaps = 44/159 (27%)
Query: 130 VCYNCDGVGHVARECTSNRRNS-NYNNNSGGCYNCGDPEHFARDCP--RQQGGSNSYNNN 186
CY C +GH A C+S R N + CYNC H DCP R GG+N
Sbjct: 7 ACYKCGTIGHYAEVCSSTERLCYNCKQPAKQCYNCQGLGHVQADCPTLRLNGGAN----- 61
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG-------------------------------GR 215
G C+ C GHLAR+C + G G
Sbjct: 62 -GRCYNCNQPGHLARNCTNPTAAGAGAPPTGPAAGRGAGARGGFQGGFRGGFSGYPRAAT 120
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CG H ARDC A C+ CGK GH +R+CT
Sbjct: 121 CYKCGGPNHFARDCQAQAM----KCYACGKLGHISRDCT 155
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S +
Sbjct: 116 PRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLS--S 164
Query: 186 NSGGCFKCGGYGHLARDCIT 205
C+KC GH++RDC T
Sbjct: 165 AGKVCYKCAQAGHISRDCPT 184
>gi|270007992|gb|EFA04440.1| hypothetical protein TcasGA2_TC014742 [Tribolium castaneum]
Length = 192
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 72/167 (43%), Gaps = 44/167 (26%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GK WF+ AKG+GFI PDDGG D+FVHQ I+ G+R+L +++ VEF+ Q+ +D +A
Sbjct: 39 GKCKWFNVAKGWGFITPDDGGQDVFVHQSVIQMSGFRSLGDDEEVEFECQV-SDKGLEAT 97
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGG 128
V+ P N RG S R
Sbjct: 98 KVSGP--------------------QNTDCRG---------------SHRRPASKKRFRK 122
Query: 129 VVCYNC-DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
+ CYNC + H+A +CT C+NC +H DCP
Sbjct: 123 IRCYNCGEFANHIAAKCT-------MGPQPKRCHNCKSEDHLIADCP 162
>gi|432090075|gb|ELK23671.1| Cellular nucleic acid-binding protein [Myotis davidii]
Length = 142
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 38 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 83
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 84 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 132
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 133 ARECTIEAT 141
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 18 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 62
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 63 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 111
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 112 AINCSKTSE 120
>gi|359475089|ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like isoform 2 [Vitis vinifera]
Length = 246
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+NC GH+A ECT+ C+NC +P H A +CP
Sbjct: 57 PNVAVCHNCSLPGHIASECTTR----------SLCWNCQEPGHTASNCP----------- 95
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GHLARDC G C NC K GH+A DC A C NC K
Sbjct: 96 NEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKA-----CNNCRK 150
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 151 TGHLARDC 158
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 62/144 (43%), Gaps = 31/144 (21%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
N RR++ G+ G + C NC GH AREC N C+NC P H A +
Sbjct: 26 NAPYRRDSRRGFSQGNL-CKNCKRPGHYARECP----------NVAVCHNCSLPGHIASE 74
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C C+ C GH A +C G C+ CGK+GHLARDC A
Sbjct: 75 C-----------TTRSLCWNCQEPGHTASNCPNEGI-------CHTCGKTGHLARDCSAP 116
Query: 233 GAGGGGS--CFNCGKPGHFARECT 254
G C NC K GH A +CT
Sbjct: 117 PVPPGDLRLCNNCYKQGHIAADCT 140
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ------GGSNSY 183
C NC GH+AR+C N C C H AR CP+ GG S
Sbjct: 144 ACNNCRKTGHLARDC----------RNDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSS 193
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C C GH++RDC C NCG GH+A +C +G
Sbjct: 194 GFRDIVCRNCQQLGHMSRDC------AAPLMICRNCGGRGHMAFECPSG 236
>gi|417396563|gb|JAA45315.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 178
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 23/116 (19%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ S C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLSDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 131 CYNCDGVGHVAREC------------------TSNRRNSNYNNN-SGGCYNCGDPEHFAR 171
C+ C GH AREC TS+R +++ S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLSDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQE---------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 114
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 115 ADE---QKCYSCGEFGHIQKDCTKV 136
>gi|441674301|ref|XP_004092503.1| PREDICTED: zinc finger CCHC domain-containing protein 13 [Nomascus
leucogenys]
Length = 170
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 25/124 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R + + CYNCG H ARDC RQ+
Sbjct: 66 ICYNCGRSGHIAKDCKEPKRERHQH-----CYNCGRLGHLARDCDRQK---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH+ +DC +CY CG+ GH++ +C +C+ CGK GH
Sbjct: 112 CYSCGKLGHIQKDC--------AQVKCYRCGEIGHVSINCSKASEV---TCYRCGKSGHL 160
Query: 250 AREC 253
A+EC
Sbjct: 161 AKEC 164
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 21/101 (20%)
Query: 160 CYNCGDPEHFARDC--PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
CYNCG H A+DC P+++ + YN CG GHLARDC + +CY
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERHQHCYN--------CGRLGHLARDCDRQKEQ-----KCY 113
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CGK GH+ +DC C+ CG+ GH + C+K +
Sbjct: 114 SCGKLGHIQKDCAQV------KCYRCGEIGHVSINCSKASE 148
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG G A++C+ G+ CYNCG+SGH+A+DC C+NCG+ GH
Sbjct: 47 CYCCGESGRHAKNCVLLGNI------CYNCGRSGHIAKDCKEPKRERHQHCYNCGRLGHL 100
Query: 250 ARECTK 255
AR+C +
Sbjct: 101 ARDCDR 106
>gi|338714530|ref|XP_003363102.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 172
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 25/131 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 66 GKSCYNCGRGGHIAKDCKEPKR-----EREQCCYNCGKPGHLARDCD---------HADE 111
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ G
Sbjct: 112 QKCYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSE---VNCYRCGESG 160
Query: 248 HFARECTKVAN 258
H ARECT A
Sbjct: 161 HLARECTIEAT 171
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
G + YN CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 GKSCYN--------CGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADEQ--- 112
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 113 KCYSCGEFGHIQKDCTKV 130
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ G CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQEDGKS----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 17/85 (20%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR---------------CYNCGKSGHLARDCG 230
+S CFKCG GH AR+C T G G G CY CG+SGHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 231 AGGAGGGGSCFNCGKPGHFARECTK 255
G SC+NCG+ GH A++C +
Sbjct: 62 L--QEDGKSCYNCGRGGHIAKDCKE 84
>gi|147835847|emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]
Length = 1850
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 26/115 (22%)
Query: 139 HVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGH 198
H+A ECT+ C+NC +P H A +CP N G C CG GH
Sbjct: 1610 HIASECTTRSL----------CWNCQEPGHTASNCP-----------NEGICHTCGKTGH 1648
Query: 199 LARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
LARDC G C NC K GH+A DC A C NC K GH AR+C
Sbjct: 1649 LARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKA-----CNNCRKTGHLARDC 1698
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 60/139 (43%), Gaps = 36/139 (25%)
Query: 126 PGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
PG + +C NC GH+A +CT+++ C NC H ARDC
Sbjct: 1660 PGDLRLCNNCYKQGHIAADCTNDK----------ACNNCRKTGHLARDC----------- 1698
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGG--GGGGR--------CYNCGKSGHLARDCGAGGA 234
N C C GH+AR C G GGG R C NC + GH++RDC A
Sbjct: 1699 RNDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLM 1758
Query: 235 GGGGSCFNCGKPGHFAREC 253
C NCG GH A EC
Sbjct: 1759 ----ICRNCGGRGHMAFEC 1773
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 55/128 (42%), Gaps = 30/128 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+C+NC GH A C N G C+ CG H ARDC P G NN
Sbjct: 1620 LCWNCQEPGHTASNCP----------NEGICHTCGKTGHLARDCSAPPVPPGDLRLCNN- 1668
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+K GH+A DC + C NC K+GHLARDC C C G
Sbjct: 1669 --CYK---QGHIAADCTNDKA-------CNNCRKTGHLARDCRNDPV-----CNLCNVSG 1711
Query: 248 HFARECTK 255
H AR+C K
Sbjct: 1712 HVARQCPK 1719
Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
H+A +C TR C+NC + GH A +C G C CGK GH AR+C+
Sbjct: 1610 HIASECTTRS-------LCWNCQEPGHTASNCP-----NEGICHTCGKTGHLARDCS 1654
>gi|114689169|ref|XP_529043.2| PREDICTED: zinc finger CCHC domain-containing protein 13 [Pan
troglodytes]
gi|397507945|ref|XP_003824438.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like [Pan
paniscus]
Length = 170
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC GH+A++C +R + CY CG H ARDC RQ+
Sbjct: 64 GNICYNCGRSGHIAKDCKEPKRERRQH-----CYTCGRLGHLARDCDRQK---------E 109
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG GH+ +DC +CY CG+ GH+A +C G C+ CGK G
Sbjct: 110 QKCYSCGKLGHIQKDC--------AQVKCYRCGEIGHVAINCSKTRPG---QCYRCGKSG 158
Query: 248 HFAREC 253
H A+EC
Sbjct: 159 HLAKEC 164
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CYNCG H A+DC + + C+ CG GHLARDC + +CY+C
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERRQH------CYTCGRLGHLARDCDRQKEQ-----KCYSC 115
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK GH+ +DC C+ CG+ GH A C+K
Sbjct: 116 GKLGHIQKDCAQV------KCYRCGEIGHVAINCSKT 146
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 177 QGGSNSYNNNSGG--CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
+ G N+ N G C+ CG GH+A+DC + CY CG+ GHLARDC
Sbjct: 52 ESGRNAKNRVLLGNICYNCGRSGHIAKDC--KEPKRERRQHCYTCGRLGHLARDCDRQKE 109
Query: 235 GGGGSCFNCGKPGHFARECTKV 256
C++CGK GH ++C +V
Sbjct: 110 Q---KCYSCGKLGHIQKDCAQV 128
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
V CY C +GHVA C+ R G CY CG H A++CP +
Sbjct: 128 VKCYRCGEIGHVAINCSKTR--------PGQCYRCGKSGHLAKECPSE 167
>gi|395754126|ref|XP_003779713.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Pongo abelii]
Length = 170
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 25/124 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R + + CY CG H ARDC RQ+
Sbjct: 66 ICYNCGRSGHIAKDCKEPKRERHQH-----CYTCGRLGHLARDCDRQK---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH+ +DC +CY CG+ GH+A +C +C+ CGK GH
Sbjct: 112 CYSCGKLGHIQKDC--------AQVKCYRCGEIGHVAINCSKASQV---NCYRCGKSGHL 160
Query: 250 AREC 253
AREC
Sbjct: 161 AREC 164
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CYNCG H A+DC + + + C+ CG GHLARDC + +CY+C
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERHQH------CYTCGRLGHLARDCDRQKEQ-----KCYSC 115
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GK GH+ +DC C+ CG+ GH A C+K +
Sbjct: 116 GKLGHIQKDCAQV------KCYRCGEIGHVAINCSKASQ 148
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ A++C G+ YN CG GH+A+DC + CY C
Sbjct: 47 CYCCGESSRHAKNCVLL--GNICYN--------CGRSGHIAKDC--KEPKRERHQHCYTC 94
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
G+ GHLARDC C++CGK GH ++C +V
Sbjct: 95 GRLGHLARDCDRQKEQ---KCYSCGKLGHIQKDCAQV 128
>gi|54696090|gb|AAV38417.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368820|gb|AAX43242.1| zinc finger protein 9 [synthetic construct]
Length = 178
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 73 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 118
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 119 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 167
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 168 ARECTIEAT 176
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 24/116 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 113
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 ADE---QKCYSCGEFGHIQKDCTKV 135
>gi|395863010|ref|XP_003803706.1| PREDICTED: cellular nucleic acid-binding protein-like [Otolemur
garnettii]
Length = 170
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R CY+CG P H ARDC Q+
Sbjct: 66 ICYNCGRSGHIAKDCNEPKRE-----REQCCYSCGRPGHLARDCDHQE---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTQ--------VKCYRCGETGHVAINCSKATEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 161 ARECPIEAT 169
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 160 CYNCGDPEHFARDCPRQQGGSN-----------SYNNNSGGCFKCGGYGHLARDCITRGS 208
C+ CG H+AR CPR S S C++CG GH A++C
Sbjct: 6 CFKCGRSGHWARGCPRGGARGRGARGRGRGSPCSSTTFSDICYRCGESGHHAKNCDLLED 65
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+SGH+A+DC C++CG+PGH AR+C
Sbjct: 66 I------CYNCGRSGHIAKDCNEPKREREQCCYSCGRPGHLARDC 104
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH A+ C + CYNCG H A+DC P+++
Sbjct: 46 ICYRCGESGHHAKNC---------DLLEDICYNCGRSGHIAKDCNEPKRE--------RE 88
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG GHLARDC + +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 89 QCCYSCGRPGHLARDCDHQEEQ-----KCYSCGEFGHIQKDCTQV------KCYRCGETG 137
Query: 248 HFARECTKVAN 258
H A C+K
Sbjct: 138 HVAINCSKATE 148
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRC 216
S CY CG+ H A++C + C+ CG GH+A+DC C
Sbjct: 44 SDICYRCGESGHHAKNCDLLEDI----------CYNCGRSGHIAKDC--NEPKREREQCC 91
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
Y+CG+ GHLARDC C++CG+ GH ++CT+V
Sbjct: 92 YSCGRPGHLARDCDHQEEQ---KCYSCGEFGHIQKDCTQV 128
>gi|187608726|ref|NP_001120664.1| cellular nucleic acid-binding protein isoform 1 [Homo sapiens]
gi|291393354|ref|XP_002713209.1| PREDICTED: zinc finger protein 9 isoform 1 [Oryctolagus cuniculus]
gi|355564532|gb|EHH21032.1| hypothetical protein EGK_04008 [Macaca mulatta]
gi|355786375|gb|EHH66558.1| hypothetical protein EGM_03574 [Macaca fascicularis]
Length = 179
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 75 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 120
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 121 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 169
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 170 ARECTIEAT 178
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + + CYNCG H A+DC +
Sbjct: 53 ICYRCGESGHLAKDC-------DLQEDVEACYNCGRGGHIAKDCKEPK------REREQC 99
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 100 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 148
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 149 AINCSKTSE 157
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDVEA----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 113
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 32/145 (22%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ + C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQE--------DVEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 115
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 116 ADE---QKCYSCGEFGHIQKDCTKV 137
>gi|91083993|ref|XP_975245.1| PREDICTED: similar to AGAP006591-PA [Tribolium castaneum]
Length = 195
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 72/167 (43%), Gaps = 44/167 (26%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GK WF+ AKG+GFI PDDGG D+FVHQ I+ G+R+L +++ VEF+ Q+ +D +A
Sbjct: 42 GKCKWFNVAKGWGFITPDDGGQDVFVHQSVIQMSGFRSLGDDEEVEFECQV-SDKGLEAT 100
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGG 128
V+ P N RG S R
Sbjct: 101 KVSGP--------------------QNTDCRG---------------SHRRPASKKRFRK 125
Query: 129 VVCYNC-DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
+ CYNC + H+A +CT C+NC +H DCP
Sbjct: 126 IRCYNCGEFANHIAAKCT-------MGPQPKRCHNCKSEDHLIADCP 165
>gi|452982803|gb|EME82561.1| hypothetical protein MYCFIDRAFT_111837, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 191
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 33/149 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY------- 183
CY+C G+GHV +C + R S G CY+CG H AR+CP
Sbjct: 50 CYHCQGLGHVQADCPTLRL-SGGAQGGGRCYSCGQAGHLARNCPTPNASPTGAGRGAGGP 108
Query: 184 ---------------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
NN + C+KCGG H ARDC + +CY CGK GH++RD
Sbjct: 109 ARGGYGGGFRGGFAGNNRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRD 162
Query: 229 CGAGGAG----GGGSCFNCGKPGHFAREC 253
C + G G +C+ CG+ GH +R+C
Sbjct: 163 CTSPNGGSLNSAGKTCYRCGETGHISRDC 191
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 70/158 (44%), Gaps = 45/158 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C VGH A C+S+ R CYNC P H + +CP + +
Sbjct: 5 ACYKCGNVGHYAEVCSSSERL---------CYNCKQPGHESNNCPHPR------TTETKQ 49
Query: 190 CFKCGGYGHLARDCIT-RGSGGG-GGGRCYNCGKSGHLARDCGAGGAGG----------- 236
C+ C G GH+ DC T R SGG GGGRCY+CG++GHLAR+C A
Sbjct: 50 CYHCQGLGHVQADCPTLRLSGGAQGGGRCYSCGQAGHLARNCPTPNASPTGAGRGAGGPA 109
Query: 237 -----------------GGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 110 RGGYGGGFRGGFAGNNRAATCYKCGGPNHFARDCQAQA 147
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 37/147 (25%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNY-------------- 153
G+ + + + R +GG G G CY+C GH+AR C + +
Sbjct: 57 GHVQADCPTLRLSGGAQG--GGRCYSCGQAGHLARNCPTPNASPTGAGRGAGGPARGGYG 114
Query: 154 ---------NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI 204
NN + CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 115 GGFRGGFAGNNRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCT 164
Query: 205 TR--GSGGGGGGRCYNCGKSGHLARDC 229
+ GS G CY CG++GH++RDC
Sbjct: 165 SPNGGSLNSAGKTCYRCGETGHISRDC 191
>gi|7304969|ref|NP_038521.1| cellular nucleic acid-binding protein isoform 1 [Mus musculus]
gi|187608732|ref|NP_001120665.1| cellular nucleic acid-binding protein isoform 2 [Homo sapiens]
gi|395847858|ref|XP_003796581.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Otolemur garnettii]
gi|395847860|ref|XP_003796582.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Otolemur garnettii]
gi|395847862|ref|XP_003796583.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Otolemur garnettii]
gi|50403746|sp|P53996.2|CNBP_MOUSE RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|854675|gb|AAB60490.1| cellular nucleic acid binding protein [Mus musculus]
gi|30059133|gb|AAO31613.1| cellular nucleic acid binding protein [Mus musculus]
gi|37194897|gb|AAH58723.1| Cellular nucleic acid binding protein [Mus musculus]
gi|40738015|gb|AAR89463.1| cellular nucleic acid binding protein [Mus musculus]
gi|54696094|gb|AAV38419.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Homo sapiens]
gi|68304555|gb|AAY89856.1| cellular nucleic acid binding protein alpha variant 1 [Homo
sapiens]
gi|74194928|dbj|BAE26042.1| unnamed protein product [Mus musculus]
gi|74204641|dbj|BAE35390.1| unnamed protein product [Mus musculus]
gi|310756754|gb|ADP20518.1| cellular nucleic acid binding protein [Heterocephalus glaber]
Length = 178
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQE---------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 114
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 115 ADE---QKCYSCGEFGHIQKDCTKV 136
>gi|310756752|gb|ADP20517.1| cellular nucleic acid binding protein [Fukomys anselli]
Length = 178
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 23/116 (19%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQE---------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 114
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 115 ADE---QKCYSCGEFGHIQKDCTKV 136
>gi|262072939|dbj|BAI47777.1| CCHC-type zinc finger, nucleic acid binding protein [Sus scrofa]
Length = 137
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 33 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 79 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 127
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 128 ARECTIEAT 136
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 13 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 57
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 58 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 106
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 107 AINCSKTSE 115
>gi|57648427|gb|AAW55908.1| zinc finger protein 7 [Trypanosoma cruzi]
Length = 101
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG---GR 215
CYNCG H +R+CP + G+ C+ CG GHL+R+C R +GG G G
Sbjct: 5 ACYNCGRMGHLSRECPTRPPGAM----GDRACYNCGRMGHLSRECPNRPAGGFRGVARGA 60
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY+C + GHLARDC GG +C+NCG+ GH +R C
Sbjct: 61 CYHCQQEGHLARDCPNAPPGGERACYNCGQTGHISRACP 99
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP-RQQGGSNSYNN 185
G CYNC +GH++REC + + + CYNCG H +R+CP R GG
Sbjct: 2 GDRACYNCGRMGHLSRECPTRPPGAMGDR---ACYNCGRMGHLSRECPNRPAGGFRGVAR 58
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
G C+ C GHLARDC GG CYNCG++GH++R C
Sbjct: 59 --GACYHCQQEGHLARDCPNAPPGGERA--CYNCGQTGHISRAC 98
>gi|4827071|ref|NP_003409.1| cellular nucleic acid-binding protein isoform 3 [Homo sapiens]
gi|12018264|ref|NP_072120.1| cellular nucleic acid-binding protein [Rattus norvegicus]
gi|197099834|ref|NP_001126703.1| cellular nucleic acid-binding protein [Pongo abelii]
gi|356582433|ref|NP_001239193.1| cellular nucleic acid-binding protein isoform 1 [Canis lupus
familiaris]
gi|301764545|ref|XP_002917687.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
gi|332261811|ref|XP_003279960.1| PREDICTED: cellular nucleic acid-binding protein isoform 4
[Nomascus leucogenys]
gi|332817849|ref|XP_516737.3| PREDICTED: uncharacterized protein LOC460682 isoform 4 [Pan
troglodytes]
gi|338714528|ref|XP_003363101.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|344275961|ref|XP_003409779.1| PREDICTED: cellular nucleic acid-binding protein-like [Loxodonta
africana]
gi|348553985|ref|XP_003462806.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Cavia porcellus]
gi|354482847|ref|XP_003503607.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Cricetulus griseus]
gi|390475369|ref|XP_002758716.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Callithrix jacchus]
gi|397518580|ref|XP_003829462.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Pan
paniscus]
gi|402887087|ref|XP_003906936.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|403268271|ref|XP_003926201.1| PREDICTED: cellular nucleic acid-binding protein [Saimiri
boliviensis boliviensis]
gi|410037468|ref|XP_003950232.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037472|ref|XP_003950234.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037479|ref|XP_003950237.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951814|ref|XP_003982588.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Felis
catus]
gi|426342036|ref|XP_004036322.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|426342040|ref|XP_004036324.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Gorilla
gorilla gorilla]
gi|426342042|ref|XP_004036325.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Gorilla
gorilla gorilla]
gi|426342044|ref|XP_004036326.1| PREDICTED: cellular nucleic acid-binding protein isoform 5 [Gorilla
gorilla gorilla]
gi|441665181|ref|XP_004091798.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|441665186|ref|XP_004091799.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|50401851|sp|P62634.1|CNBP_RAT RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|50401852|sp|P62633.1|CNBP_HUMAN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|75054771|sp|Q5R5R5.1|CNBP_PONAB RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|8650478|gb|AAF78224.1|AF242550_1 cellular nucleic acid binding protein [Rattus norvegicus]
gi|643576|gb|AAA61975.1| SRE-binding protein [Homo sapiens]
gi|790571|gb|AAA91782.1| nucleic acid binding protein [Homo sapiens]
gi|809511|dbj|BAA08212.1| Cellular Nucleic Acid Binding Protein [Rattus norvegicus]
gi|26344578|dbj|BAC35938.1| unnamed protein product [Mus musculus]
gi|38328236|gb|AAH62225.1| CCHC-type zinc finger, nucleic acid binding protein [Rattus
norvegicus]
gi|40738013|gb|AAR89462.1| zinc finger protein 9 [Homo sapiens]
gi|40738017|gb|AAR89464.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|55732400|emb|CAH92901.1| hypothetical protein [Pongo abelii]
gi|62205335|gb|AAH93058.1| CCHC-type zinc finger, nucleic acid binding protein [Homo sapiens]
gi|67970964|dbj|BAE01824.1| unnamed protein product [Macaca fascicularis]
gi|71891589|dbj|BAE16993.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|71891591|dbj|BAE16994.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|74144600|dbj|BAE27288.1| unnamed protein product [Mus musculus]
gi|74191437|dbj|BAE30298.1| unnamed protein product [Mus musculus]
gi|74195828|dbj|BAE30476.1| unnamed protein product [Mus musculus]
gi|74211374|dbj|BAE26440.1| unnamed protein product [Mus musculus]
gi|74226682|dbj|BAE26992.1| unnamed protein product [Mus musculus]
gi|74226907|dbj|BAE27097.1| unnamed protein product [Mus musculus]
gi|74226950|dbj|BAE27117.1| unnamed protein product [Mus musculus]
gi|90084990|dbj|BAE91236.1| unnamed protein product [Macaca fascicularis]
gi|119599679|gb|EAW79273.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|119599683|gb|EAW79277.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|148666812|gb|EDK99228.1| cellular nucleic acid binding protein, isoform CRA_a [Mus musculus]
gi|149036676|gb|EDL91294.1| cellular nucleic acid binding protein 1, isoform CRA_b [Rattus
norvegicus]
gi|189067296|dbj|BAG37006.1| unnamed protein product [Homo sapiens]
gi|208965940|dbj|BAG72984.1| CCHC-type zinc finger, nucleic acid binding protein [synthetic
construct]
gi|281347013|gb|EFB22597.1| hypothetical protein PANDA_006035 [Ailuropoda melanoleuca]
gi|344253372|gb|EGW09476.1| Cellular nucleic acid-binding protein [Cricetulus griseus]
gi|351695335|gb|EHA98253.1| Cellular nucleic acid-binding protein [Heterocephalus glaber]
gi|387543018|gb|AFJ72136.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410253690|gb|JAA14812.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|440895043|gb|ELR47334.1| Cellular nucleic acid-binding protein [Bos grunniens mutus]
gi|444512840|gb|ELV10182.1| Cellular nucleic acid-binding protein [Tupaia chinensis]
Length = 177
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 73 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 118
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 119 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 167
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 168 ARECTIEAT 176
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 24/116 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 113
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 ADE---QKCYSCGEFGHIQKDCTKV 135
>gi|410293500|gb|JAA25350.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 72 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 117
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 118 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 166
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 167 ARECTIEAT 175
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPR-----------------QQGGSNSYNNNSGGCFKCGGYGH 198
+S C+ CG H+AR+CP +G ++ C++CG GH
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 61
Query: 199 LARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
LA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 110
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 67/144 (46%), Gaps = 33/144 (22%)
Query: 131 CYNCDGVGHVARECTS----------------NRRNSNYNNNS--GGCYNCGDPEHFARD 172
C+ C GH AREC + + R + ++S CY CG+ H A+D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKD 65
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 CDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHA 113
Query: 233 GAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 DE---QKCYSCGEFGHIQKDCTKV 134
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 52 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 96
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 97 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 145
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 146 AINCSKTSE 154
>gi|383421411|gb|AFH33919.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410221754|gb|JAA08096.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 72 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 117
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 118 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 166
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 167 ARECTIEAT 175
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPR-----------------QQGGSNSYNNNSGGCFKCGGYGH 198
+S C+ CG H+AR+CP +G ++ C++CG GH
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFTSDRGFQFVSSSLPDICYRCGESGH 61
Query: 199 LARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
LA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 110
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 67/144 (46%), Gaps = 33/144 (22%)
Query: 131 CYNCDGVGHVARECTS----------------NRRNSNYNNNS--GGCYNCGDPEHFARD 172
C+ C GH AREC + + R + ++S CY CG+ H A+D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFTSDRGFQFVSSSLPDICYRCGESGHLAKD 65
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 CDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHA 113
Query: 233 GAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 DE---QKCYSCGEFGHIQKDCTKV 134
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 52 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 96
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 97 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 145
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 146 AINCSKTSE 154
>gi|302421536|ref|XP_003008598.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351744|gb|EEY14172.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 459
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 111 KGNNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K N R N G P G C NC +GH+++ CT++R+ S CYNC + H
Sbjct: 211 KEENLERLTNAGEPAPTGKPRCTNCKELGHISKNCTADRQE--IEKVSIRCYNCDEDGHR 268
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
RDCP + + C C GH A DC G C C + GH +RDC
Sbjct: 269 VRDCPVPR-------KDKFACKNCNQPGHKAADCTE--PRNADGVECNKCHEMGHFSRDC 319
Query: 230 GAGGAGGGGSCFNCGKPGHFARECTK 255
GG+ +C NC + GH A+EC +
Sbjct: 320 PQGGSR---TCRNCDQEGHIAKECPE 342
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C C GH++++C R RCYNC + GH RDC +C NC +PGH
Sbjct: 232 CTNCKELGHISKNCTADRQEIEKVSIRCYNCDEDGHRVRDCPVP-RKDKFACKNCNQPGH 290
Query: 249 FARECTKVAN 258
A +CT+ N
Sbjct: 291 KAADCTEPRN 300
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 23/103 (22%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NCD GH+A+EC RR C NC + H R+CP+ Q + +
Sbjct: 323 GSRTCRNCDQEGHIAKECPEPRRMQ--------CRNCDEYGHTGRECPKPQDSKSKLSVP 374
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
F C A ++R +C NCG+ GH +C
Sbjct: 375 ----FLCP----FANRSVSR-------VKCLNCGEMGHKKYNC 402
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 14/70 (20%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NCG+P H R+CP C C GH+ RDC + + C NC
Sbjct: 41 CNNCGEPGHMRRECPSLPPMV---------CIFCNEEGHMRRDCPNKPAEV-----CRNC 86
Query: 220 GKSGHLARDC 229
+ GHL +C
Sbjct: 87 QQEGHLVSEC 96
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C CG GH+ R+C + C C + GH+ RDC A C NC + GH
Sbjct: 41 CNNCGEPGHMRRECPSLPPMV-----CIFCNEEGHMRRDCPNKPAE---VCRNCQQEGHL 92
Query: 250 AREC 253
EC
Sbjct: 93 VSEC 96
>gi|334342426|ref|XP_001378413.2| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Monodelphis domestica]
gi|395516728|ref|XP_003762539.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Sarcophilus harrisii]
Length = 177
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 73 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 118
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 119 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 167
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 168 ARECTIEAT 176
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 24/116 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ------------------QGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSARGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSARGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 113
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 ADE---QKCYSCGEFGHIQKDCTKV 135
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 53 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 97
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 98 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 146
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 147 AINCSKTSE 155
>gi|125570752|gb|EAZ12267.1| hypothetical protein OsJ_02155 [Oryza sativa Japonica Group]
Length = 98
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V FD G+ FI PDDG DLF+HQ S+K DGYR+L ++ +E V DG+
Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64
Query: 66 QALDVTAPG 74
+A+DVTAPG
Sbjct: 65 KAVDVTAPG 73
>gi|187608738|ref|NP_001120666.1| cellular nucleic acid-binding protein isoform 4 [Homo sapiens]
gi|291393356|ref|XP_002713210.1| PREDICTED: zinc finger protein 9 isoform 2 [Oryctolagus cuniculus]
gi|68359783|gb|AAY96755.1| cellular nucleic acid binding protein beta variant 2 [Homo sapiens]
Length = 172
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 68 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 113
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 114 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 162
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 163 ARECTIEAT 171
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQEDVEA----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE- 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 65 -------DVEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 112
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 113 KCYSCGEFGHIQKDCTKV 130
>gi|336269017|ref|XP_003349270.1| hypothetical protein SMAC_05554 [Sordaria macrospora k-hell]
gi|380089843|emb|CCC12376.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 184
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++R+C ++ N+ CY CG H +RDC Q G ++
Sbjct: 29 GAAKCYNCGNEGHMSRDCPEGPKD-----NARTCYRCGQTGHISRDC--SQSGGQGGQSS 81
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR--------------CYNCGKSGHLARDCGAG 232
C+KCG GH+AR+C G+ GGG + CY+CG GH++RDC
Sbjct: 82 GAECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYSCGGIGHMSRDCV-- 139
Query: 233 GAGGGGSCFNCGKPGHFARECTK 255
G C+NCG+ GHF+R+C K
Sbjct: 140 ---NGSKCYNCGESGHFSRDCPK 159
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR----------QQGG 179
CY C GH++R+C+ + ++ CY CG+ H AR+C + G
Sbjct: 56 TCYRCGQTGHISRDCSQSGGQGG-QSSGAECYKCGEVGHIARNCSKGGAAYGGGFQNSGY 114
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
+ + C+ CGG GH++RDC+ G +CYNCG+SGH +RDC G
Sbjct: 115 GGGFGGPAKTCYSCGGIGHMSRDCVN-------GSKCYNCGESGHFSRDCPKDSGSGEKI 167
Query: 240 CFNCGKPGHFAREC 253
C+ C +PGH +C
Sbjct: 168 CYKCQQPGHVQSQC 181
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 32/148 (21%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C+ C H AR+C N + CYNCG+ H +RDCP
Sbjct: 6 APQARACFTCGQTTHQARDCP--------NKGAAKCYNCGNEGHMSRDCP------EGPK 51
Query: 185 NNSGGCFKCGGYGHLARDC--ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---- 238
+N+ C++CG GH++RDC G G CY CG+ GH+AR+C GGA GG
Sbjct: 52 DNARTCYRCGQTGHISRDCSQSGGQGGQSSGAECYKCGEVGHIARNCSKGGAAYGGGFQN 111
Query: 239 ------------SCFNCGKPGHFARECT 254
+C++CG GH +R+C
Sbjct: 112 SGYGGGFGGPAKTCYSCGGIGHMSRDCV 139
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CY 217
C+ CG H ARDCP N + C+ CG GH++RDC G R CY
Sbjct: 11 ACFTCGQTTHQARDCP---------NKGAAKCYNCGNEGHMSRDCP---EGPKDNARTCY 58
Query: 218 NCGKSGHLARDCGAGGAGGG----GSCFNCGKPGHFARECTK 255
CG++GH++RDC G GG C+ CG+ GH AR C+K
Sbjct: 59 RCGQTGHISRDCSQSGGQGGQSSGAECYKCGEVGHIARNCSK 100
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G+GH++R+C N CYNCG+ HF+RDCP+ G
Sbjct: 124 TCYSCGGIGHMSRDCV----------NGSKCYNCGESGHFSRDCPKDSGSGEKI------ 167
Query: 190 CFKCGGYGHLARDCIT 205
C+KC GH+ C +
Sbjct: 168 CYKCQQPGHVQSQCPS 183
>gi|2665788|gb|AAB88490.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 68 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 113
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 114 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 162
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 163 ARECTIEAT 171
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 23/113 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ---------------QGGSNSYNNNSGGCFKCGGYGHLA 200
+S C+ CG H+AR+CP Q S+S + C++CG GHLA
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDI---CYRCGESGHLA 58
Query: 201 RDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 KDCDLQEDEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-------------CYNCGDPEHFARDCPRQQ 177
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQE 65
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 ---------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE--- 111
Query: 238 GSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 112 QKCYSCGEFGHIQKDCTKV 130
>gi|54696092|gb|AAV38418.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368826|gb|AAX43243.1| zinc finger protein 9 [synthetic construct]
Length = 171
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 66 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 161 ARECTIEAT 169
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC P+++ YN
Sbjct: 46 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN--- 93
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 94 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETG 137
Query: 248 HFARECTKVAN 258
H A C+K +
Sbjct: 138 HVAINCSKTSE 148
>gi|45382487|ref|NP_990238.1| cellular nucleic acid-binding protein [Gallus gallus]
gi|6225175|sp|O42395.1|CNBP_CHICK RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2232217|gb|AAB62243.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 68 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 113
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 114 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 162
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 163 ARECTIEAT 171
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 23/113 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ---------------QGGSNSYNNNSGGCFKCGGYGHLA 200
+S C+ CG H+AR+CP Q S+S + C++CG GHLA
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDI---CYRCGESGHLA 58
Query: 201 RDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 KDCDLQEDKA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-------------CYNCGDPEHFARDCPRQQ 177
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQE 65
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 ---------DKACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE--- 111
Query: 238 GSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 112 QKCYSCGEFGHIQKDCTKV 130
>gi|242807741|ref|XP_002485018.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
gi|218715643|gb|EED15065.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
Length = 181
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 76/148 (51%), Gaps = 29/148 (19%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN- 185
G CYNC G GHV+RECT + + CY CG H +RDC +Q G +N+ N
Sbjct: 27 GTPTCYNCGGQGHVSRECTQAPKEKS-------CYRCGQTGHISRDC-QQSGPANNGGNY 78
Query: 186 --------NSGGCFKCGGYGHLARDCITRGSGGGGGG-------RCYNCGKSGHLARDCG 230
C+KCG GH+AR+C G GGG G CY+CG GH+ARDC
Sbjct: 79 RGGFSGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGGYGHMARDCT 138
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKVAN 258
G C+NCG+ GH +R+CT N
Sbjct: 139 QGQ-----KCYNCGEVGHVSRDCTTEGN 161
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 36/134 (26%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYGHLARD 202
S GC+NCG+P H ARDCP++ G YN C++CG GH++RD
Sbjct: 7 SRGCFNCGEPSHQARDCPKK-GTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRD 65
Query: 203 CITRGSGGGGGG------------RCYNCGKSGHLARDCGAGGAGGGG---------SCF 241
C G GG CY CG+ GH+AR+C GG GGG +C+
Sbjct: 66 CQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCY 125
Query: 242 NCGKPGHFARECTK 255
+CG GH AR+CT+
Sbjct: 126 SCGGYGHMARDCTQ 139
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C+NCG+ H ARDC G +C+NCG GH +RECT+
Sbjct: 10 CFNCGEPSHQARDCPKKGT---PTCYNCGGQGHVSRECTQAP 48
>gi|77735399|ref|NP_001029396.1| cellular nucleic acid-binding protein [Bos taurus]
gi|157909784|ref|NP_001103216.1| cellular nucleic acid-binding protein isoform 3 [Mus musculus]
gi|187608750|ref|NP_001120668.1| cellular nucleic acid-binding protein isoform 6 [Homo sapiens]
gi|356582435|ref|NP_001239194.1| cellular nucleic acid-binding protein isoform 2 [Canis lupus
familiaris]
gi|332261807|ref|XP_003279958.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Nomascus leucogenys]
gi|332817847|ref|XP_003310041.1| PREDICTED: uncharacterized protein LOC460682 isoform 2 [Pan
troglodytes]
gi|332817851|ref|XP_003310042.1| PREDICTED: uncharacterized protein LOC460682 isoform 3 [Pan
troglodytes]
gi|334342424|ref|XP_003341812.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Monodelphis domestica]
gi|338714526|ref|XP_003363100.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|348553987|ref|XP_003462807.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Cavia porcellus]
gi|354482849|ref|XP_003503608.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Cricetulus griseus]
gi|390475371|ref|XP_003734945.1| PREDICTED: cellular nucleic acid-binding protein [Callithrix
jacchus]
gi|395516730|ref|XP_003762540.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Sarcophilus harrisii]
gi|397518582|ref|XP_003829463.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Pan
paniscus]
gi|402887089|ref|XP_003906937.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037470|ref|XP_003950233.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951816|ref|XP_003982589.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Felis
catus]
gi|426342038|ref|XP_004036323.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426342046|ref|XP_004036327.1| PREDICTED: cellular nucleic acid-binding protein isoform 6 [Gorilla
gorilla gorilla]
gi|110832801|sp|Q3T0Q6.1|CNBP_BOVIN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2136380|pir||A55499 zinc finger protein 9 - human
gi|292348|gb|AAA89198.1| nucleic acid binding protein [Mus sp.]
gi|12653049|gb|AAH00288.1| CNBP protein [Homo sapiens]
gi|15928890|gb|AAH14911.1| CNBP protein [Homo sapiens]
gi|55730956|emb|CAH92196.1| hypothetical protein [Pongo abelii]
gi|74207292|dbj|BAE30832.1| unnamed protein product [Mus musculus]
gi|74226825|dbj|BAE27058.1| unnamed protein product [Mus musculus]
gi|74354088|gb|AAI02299.1| CCHC-type zinc finger, nucleic acid binding protein [Bos taurus]
gi|119599678|gb|EAW79272.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|119599681|gb|EAW79275.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|149036675|gb|EDL91293.1| cellular nucleic acid binding protein 1, isoform CRA_a [Rattus
norvegicus]
gi|296474617|tpg|DAA16732.1| TPA: cellular nucleic acid-binding protein [Bos taurus]
gi|380816310|gb|AFE80029.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|383421415|gb|AFH33921.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|384949298|gb|AFI38254.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|410221752|gb|JAA08095.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410253688|gb|JAA14811.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410293498|gb|JAA25349.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 170
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 66 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 161 ARECTIEAT 169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 46 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 90
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 91 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 139
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 140 AINCSKTSE 148
>gi|119599682|gb|EAW79276.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_d [Homo sapiens]
gi|383421413|gb|AFH33920.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
Length = 171
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 67 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 161
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 162 ARECTIEAT 170
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------CFKCGGYGHLARDC 203
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC 61
Query: 204 ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 DLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 63/139 (45%), Gaps = 28/139 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-------------CYNCGDPEHFARDCPRQQ 177
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDCDLQE 65
Query: 178 GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DA----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE--- 110
Query: 238 GSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 QKCYSCGEFGHIQKDCTKV 129
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC +
Sbjct: 47 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPK------REREQC 91
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 92 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETGHV 140
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 141 AINCSKTSE 149
>gi|157909782|ref|NP_001103215.1| cellular nucleic acid-binding protein isoform 2 [Mus musculus]
gi|187608744|ref|NP_001120667.1| cellular nucleic acid-binding protein isoform 5 [Homo sapiens]
gi|68359739|gb|AAY96754.1| cellular nucleic acid binding protein beta variant 1 [Homo sapiens]
gi|74142441|dbj|BAE31974.1| unnamed protein product [Mus musculus]
Length = 171
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 67 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 161
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 162 ARECTIEAT 170
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 26/138 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE- 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 65 --------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 111
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 112 KCYSCGEFGHIQKDCTKV 129
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 36/104 (34%)
Query: 186 NSGGCFKCGGYGHLARDCIT---------------------------RGSGGGGGGR--- 215
+S CFKCG GH AR+C T R G +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 216 ------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
>gi|71416079|ref|XP_810083.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70874564|gb|EAN88232.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +R+C+ N C+ CG P H ++DC ++ + +
Sbjct: 1 MVCYRCGGVGHTSRDCSRP-------VNESLCFRCGKPGHMSKDC------ASDIDVKNA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPG 247
CF C GH A +C + CY CG+ GH++RDC SCF+C K G
Sbjct: 48 PCFFCQQAGHRANNCPL--APPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTG 105
Query: 248 HFARECTKVAN 258
H+AREC +V
Sbjct: 106 HYARECPEVIE 116
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R+CT N + C++C H+AR+CP + C
Sbjct: 73 CYRCGEEGHISRDCT----NPRLPRSEQSCFHCHKTGHYARECPEVI--------ENLKC 120
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPGHF 249
CG GH+AR C R C+ CG GH+AR+C C+ CG+ GH
Sbjct: 121 NSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQLCYVCGEKGHL 180
Query: 250 ARECTKVA 257
AR+C A
Sbjct: 181 ARDCKSEA 188
>gi|449473367|ref|XP_002187556.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Taeniopygia guttata]
Length = 170
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 66 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 161 ARECTIEAT 169
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ--------------QGGSNSYNNNSGGCFKCGGYGHLAR 201
+S C+ CG H+AR+CP Q S+S + C++CG GHLA+
Sbjct: 2 SSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDI---CYRCGESGHLAK 58
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 DCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
>gi|302142593|emb|CBI19796.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
NN R + P +C NC+ GH+A ECT+ C+NC +P H A +
Sbjct: 52 NNCKRPGHFARECPNVAICNNCNLPGHIASECTT----------QSLCWNCREPGHMASN 101
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
CP N G C C GH ARDC T G G C NC K GH+A DC
Sbjct: 102 CP-----------NEGICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTND 150
Query: 233 GAGGGGSCFNCGKPGHFAREC 253
A C NC K GH AR+C
Sbjct: 151 KA-----CKNCRKTGHIARDC 166
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 55/134 (41%), Gaps = 35/134 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH+A +CT N C NC H ARDC N
Sbjct: 133 LCNNCYKQGHIAADCT----------NDKACKNCRKTGHIARDC-----------QNEPV 171
Query: 190 CFKCGGYGHLARDCITRGSGG--GGGGR--------CYNCGKSGHLARDCGAGGAGGGGS 239
C C GH+AR C G GGGGR C +C + GH++RDC
Sbjct: 172 CNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDCMVSLV----I 227
Query: 240 CFNCGKPGHFAREC 253
C NCG GH A EC
Sbjct: 228 CNNCGGRGHMAFEC 241
>gi|430812110|emb|CCJ30446.1| unnamed protein product [Pneumocystis jirovecii]
Length = 197
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C +GH+ +C S R N+ +SG CY+CG H AR C + ++G
Sbjct: 48 LQCYYCQSIGHIQADCPSFRINTA--GSSGRCYSCGMTGHLARSCHGIPSAGTPIHFSAG 105
Query: 189 ---GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
CFKCGG H ARDC + +CY CGK GH++ C G+ SC+ CG
Sbjct: 106 RMQVCFKCGGPNHYARDCQAQSV------KCYACGKYGHISSIC-ENGSQTSKSCYRCGN 158
Query: 246 PGHFARECTKVAN 258
H A++CT + +
Sbjct: 159 LEHLAKDCTTILS 171
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C +GH A C R CYNC P H + CP + C
Sbjct: 6 CYKCGDLGHFADSCAKTDR---------LCYNCKQPGHESNACPFPRTAERL------QC 50
Query: 191 FKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDC----GAG-----GAGGGGSC 240
+ C GH+ DC + R + G GRCY+CG +GHLAR C AG AG C
Sbjct: 51 YYCQSIGHIQADCPSFRINTAGSSGRCYSCGMTGHLARSCHGIPSAGTPIHFSAGRMQVC 110
Query: 241 FNCGKPGHFAREC 253
F CG P H+AR+C
Sbjct: 111 FKCGGPNHYARDC 123
>gi|297824943|ref|XP_002880354.1| hypothetical protein ARALYDRAFT_480954 [Arabidopsis lyrata subsp.
lyrata]
gi|297326193|gb|EFH56613.1| hypothetical protein ARALYDRAFT_480954 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 56/74 (75%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WFD KG+GFI P+DGG DLFVHQ SI+S+G+R+L +SVEF+V+++ G+
Sbjct: 13 RRKGSVKWFDTQKGFGFITPNDGGDDLFVHQSSIRSEGFRSLAAEESVEFEVEVDNTGRP 72
Query: 66 QALDVTAPGGAPVH 79
+A++V+ P GAPV
Sbjct: 73 KAVEVSGPDGAPVQ 86
>gi|58802483|gb|AAW82446.1| cellular nucleic acid-binding protein [Carassius gibelio]
Length = 163
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CYNCG H ARDC + N
Sbjct: 59 ACYNCHRSGHISRDCKEPKKE-----REQSCYNCGKAGHVARDCD---------HGNEQK 104
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 105 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHL 153
Query: 250 ARECTKVAN 258
ARECT A+
Sbjct: 154 ARECTIEAS 162
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + + C+ C GH++RDC + CYNC
Sbjct: 40 CYRCGEQGHIARDCEQTEDA----------CYNCHRSGHISRDC--KEPKKEREQSCYNC 87
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+ARDC G C++CG GH + C KV
Sbjct: 88 GKAGHVARDCDHGNE---QKCYSCGGFGHIQKLCDKV 121
>gi|50471|emb|CAA45345.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
gi|50473|emb|CAA77896.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
Length = 170
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 66 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 161 ARECTIEAT 169
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCIT 205
S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL 62
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 63 QEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
>gi|345329901|ref|XP_003431440.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 170
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 66 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 161 ARECTIEAT 169
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGLRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC P+++ YN
Sbjct: 46 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN--- 93
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 94 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETG 137
Query: 248 HFARECTKVAN 258
H A C+K +
Sbjct: 138 HVAINCSKTSE 148
>gi|26347241|dbj|BAC37269.1| unnamed protein product [Mus musculus]
Length = 171
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 67 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 161
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 162 ARECTIEAT 170
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 26/138 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+P H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGEPGHLAKDCDLQE- 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 65 --------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 111
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 112 KCYSCGEFGHIQKDCTKV 129
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 43/104 (41%), Gaps = 36/104 (34%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR------------------------------ 215
+S CFKCG GH AR+C T G G G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGEPGHLAKDCD 61
Query: 216 ------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
>gi|426249733|ref|XP_004018604.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Ovis
aries]
Length = 176
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH+A++C +R CYNCG P H ARDC + + C
Sbjct: 73 CYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQKC 118
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH A
Sbjct: 119 YSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHLA 167
Query: 251 RECTKVAN 258
RECT A
Sbjct: 168 RECTIEAT 175
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 25/116 (21%)
Query: 156 NSGGCYNCGDPEHFARDCP------------------RQQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPAGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
A+D I GG CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 PPAKDWIR-------GGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 110
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CYNCG H A+DC + C+ CG GHLARDC +CY
Sbjct: 71 GPCYNCGRGGHIAKDCKEPK------REREQCCYNCGKPGHLARDC-----DHADEQKCY 119
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CG+ GH+ +DC C+ CG+ GH A C+K +
Sbjct: 120 SCGEFGHIQKDCTKV------KCYRCGETGHVAINCSKTSE 154
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 35/145 (24%)
Query: 131 CYNCDGVGHVARECT-----------------SNRRNSNYNNNSGG--CYNCGDPEHFAR 171
C+ C GH AREC ++ R + ++S CY CG+ A+
Sbjct: 6 CFKCGRSGHWARECPAGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGPPAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
D R G C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DWIR-----------GGPCYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 112
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 113 ADEQ---KCYSCGEFGHIQKDCTKV 134
>gi|89269563|emb|CAJ82604.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Xenopus (Silurana) tropicalis]
gi|115292111|gb|AAI22021.1| cnbp protein [Xenopus (Silurana) tropicalis]
Length = 177
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 73 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCD---------HADEQK 118
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 119 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 167
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 168 ARECTIEAT 176
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 24/116 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------------CFKCGGYG 197
+S C+ CG H+AR+CP G G C++CG G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 111
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 62/145 (42%), Gaps = 34/145 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-------------------CYNCGDPEHFAR 171
C+ C GH AREC + G CY CG+ H A+
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCDH 113
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 ADEQ---KCYSCGEFGHIQKDCTKV 135
>gi|58004799|gb|AAW62459.1| cellular nucleic acid binding protein mutant delta-RGG [synthetic
construct]
Length = 162
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 58 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 103
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 104 CYSCGEFGHIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 152
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 153 ARECTIEAT 161
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG----CYNCGDPEHFARDCPRQQGGSNSYNNN 186
C+ C GH AREC + + + S CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDCDLQEDA------- 58
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+ CG GH+A+DC + CYNCGK GHLARDC C++CG+
Sbjct: 59 ---CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCEHADE---QKCYSCGEF 110
Query: 247 GHFARECTKV 256
GH ++CTKV
Sbjct: 111 GHIQKDCTKV 120
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 156 NSGGCYNCGDPEHFARDCPR---QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
+S C+ CG H+AR+CP +G ++ C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDCDLQEDA--- 58
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 ---CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 96
>gi|149642096|ref|XP_001505515.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Ornithorhynchus anatinus]
Length = 177
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 73 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 118
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 119 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 167
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 168 ARECTIEAT 176
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H A+DC Q+ C+ CG GH+A+DC + CYNC
Sbjct: 54 CYRCGESGHLAKDCDLQEDA----------CYNCGRGGHIAKDC--KEPKREREQCCYNC 101
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK GHLARDC C++CG+ GH ++CTKV
Sbjct: 102 GKPGHLARDCDHADE---QKCYSCGEFGHIQKDCTKV 135
>gi|57648428|gb|AAW55909.1| zinc finger protein 8 [Trypanosoma cruzi]
Length = 192
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +R+C+ N C+ CG P H ++DC ++ + +
Sbjct: 1 MVCYRCGGVGHTSRDCSRP-------VNESLCFRCGKPGHMSKDC------ASDIDVKNA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPG 247
CF C GH A C + CY CG+ GH++RDC SCF+C K G
Sbjct: 48 PCFFCQQAGHRANSCPL--APPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKAG 105
Query: 248 HFARECTKVAN 258
H+AREC +V
Sbjct: 106 HYARECPEVIE 116
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R+CT N + C++C H+AR+CP + C
Sbjct: 73 CYRCGEEGHISRDCT----NPRLPRSEQSCFHCHKAGHYARECPEV--------IENLKC 120
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPGHF 249
CG GH+AR C R C+ CG GH+AR+C C+ CG+ GH
Sbjct: 121 NSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQLCYVCGEKGHL 180
Query: 250 ARECTKVA 257
AR+C A
Sbjct: 181 ARDCKSEA 188
>gi|449266322|gb|EMC77386.1| Cellular nucleic acid-binding protein [Columba livia]
Length = 181
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 77 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 122
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 123 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 171
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 172 ARECTIEAT 180
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 156 NSGGCYNCGDPEHFARDCPR----------------------QQGGSNSYNNNSGGCFKC 193
+S C+ CG H+AR+CP Q G ++ C++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAFFFSCYPFQAGFQFMSSSLPDICYRC 61
Query: 194 GGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 115
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC P+++ YN
Sbjct: 57 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN--- 104
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 105 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETG 148
Query: 248 HFARECTKVAN 258
H A C+K +
Sbjct: 149 HVAINCSKTSE 159
>gi|296811728|ref|XP_002846202.1| zinc knuckle domain-containing protein [Arthroderma otae CBS
113480]
gi|238843590|gb|EEQ33252.1| zinc knuckle domain-containing protein [Arthroderma otae CBS
113480]
Length = 191
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 34/144 (23%)
Query: 136 GVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP---RQQGGSNSYN-------- 184
G+GHV +C + R N +N CYNC P H AR+CP QQ + N
Sbjct: 11 GLGHVQADCPTLRLNGGASN--ARCYNCNIPGHLARNCPSGSMQQAPQGARNAGPARGGF 68
Query: 185 -----------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ C+KCGG H ARDC + +CY CGK GH++RDC A
Sbjct: 69 NAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAPN 122
Query: 234 AGG----GGSCFNCGKPGHFAREC 253
G G C+ C + GH +R+C
Sbjct: 123 GGPLSTVGKVCYKCSQAGHISRDC 146
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 60/147 (40%), Gaps = 38/147 (25%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYN------------- 154
G+ + + + R NGG CYNC+ GH+AR C S
Sbjct: 13 GHVQADCPTLRLNGGA---SNARCYNCNIPGHLARNCPSGSMQQAPQGARNAGPARGGFN 69
Query: 155 ----------NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI 204
+ CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 70 AGFRGGPAGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCT 119
Query: 205 TR--GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 120 APNGGPLSTVGKVCYKCSQAGHISRDC 146
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
Query: 91 GYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRN 150
G N RGG AGF R GY P CY C G H AR+C +
Sbjct: 57 GARNAGPARGGFNAGF-----------RGGPAGY-PRAATCYKCGGPNHFARDCQAQAMK 104
Query: 151 SNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT 205
CY CG H +RDC GG S C+KC GH++RDC T
Sbjct: 105 ---------CYACGKLGHISRDCTAPNGGPLSTVGKV--CYKCSQAGHISRDCPT 148
>gi|57900030|dbj|BAD88072.1| cold shock domain protein 2-like protein [Oryza sativa Japonica
Group]
Length = 221
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V FD G+ FI PDDG DLF+HQ S+K DGYR+L ++ +E V DG+
Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64
Query: 66 QALDVTAPGG 75
+A+DVTAPG
Sbjct: 65 KAVDVTAPGS 74
>gi|385301300|gb|EIF45501.1| zinc knuckle domain protein [Dekkera bruxellensis AWRI1499]
Length = 189
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C GH A +C +R CYNC P+H A+DCP + N+
Sbjct: 7 TCYKCGLTGHKAEDCPQTQR---------LCYNCRSPDHEAKDCPLPK------QTNTKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CF CG GH+ +C +CYNCGK GH+A+DC A C+NCG H
Sbjct: 52 CFNCGKIGHIRSEC---PEPPHRQVKCYNCGKFGHVAKDCYAEKRSEKIVCYNCGGFNHL 108
Query: 250 AREC 253
A++C
Sbjct: 109 AKDC 112
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC +GH+ EC + CYNCG H A+DC ++ C
Sbjct: 52 CFNCGKIGHIRSECPEP------PHRQVKCYNCGKFGHVAKDCYAEKRSEKIV------C 99
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG+ HLA+DC +CYNCG++GHLA+ C + CF CG+ GH A
Sbjct: 100 YNCGGFNHLAKDC------RADPVKCYNCGETGHLAKFCHSKS--KAKVCFKCGEEGHLA 151
Query: 251 REC 253
R C
Sbjct: 152 RFC 154
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V CYNC GHVA++C + +R+ CYNCG H A+DC +
Sbjct: 73 VKCYNCGKFGHVAKDCYAEKRSEKI-----VCYNCGGFNHLAKDC----------RADPV 117
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ CG GHLA+ C ++ C+ CG+ GHLAR C
Sbjct: 118 KCYNCGETGHLAKFCHSKSKAKV----CFKCGEEGHLARFC 154
>gi|320168085|gb|EFW44984.1| hypothetical protein CAOG_02990 [Capsaspora owczarzaki ATCC 30864]
Length = 510
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 62/135 (45%), Gaps = 25/135 (18%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G V C+ C G GHV C N SN CY C P HFAR+CPR G + Y N
Sbjct: 178 GAVECHLCKGKGHVKMRCP-NSVPSNV------CYLCQMPGHFARECPR---GRDPYGLN 227
Query: 187 -------SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
S C++C GHL+ +C G CY CG+ GH+A+DC
Sbjct: 228 RAPFGGDSRLCYRCQQPGHLSANCPRVARGEQSLSSCYKCGQEGHIAKDCNV-------- 279
Query: 240 CFNCGKPGHFARECT 254
C++C K GH A C
Sbjct: 280 CYHCKKTGHVAASCP 294
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 190 CFKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+KCGG+GH+ C + G C+ C GH+ C + C+ C PG
Sbjct: 154 CYKCGGFGHIQDFCPSPSGSIDMEGAVECHLCKGKGHVKMRCP--NSVPSNVCYLCQMPG 211
Query: 248 HFARECTK 255
HFAREC +
Sbjct: 212 HFARECPR 219
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 16/108 (14%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG H CP G + + C C G GH+ C CY C
Sbjct: 154 CYKCGGFGHIQDFCPSPSGSID--MEGAVECHLCKGKGHVKMRC----PNSVPSNVCYLC 207
Query: 220 GKSGHLARDCGAG--------GAGGGGS--CFNCGKPGHFARECTKVA 257
GH AR+C G GG S C+ C +PGH + C +VA
Sbjct: 208 QMPGHFARECPRGRDPYGLNRAPFGGDSRLCYRCQQPGHLSANCPRVA 255
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 17/81 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH++ C R + + CY CG H A+DC
Sbjct: 237 LCYRCQQPGHLSANCP---RVARGEQSLSSCYKCGQEGHIAKDC--------------NV 279
Query: 190 CFKCGGYGHLARDCITRGSGG 210
C+ C GH+A C R G
Sbjct: 280 CYHCKKTGHVAASCPDRPPGA 300
>gi|238015158|gb|ACR38614.1| unknown [Zea mays]
Length = 240
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 69/120 (57%), Gaps = 28/120 (23%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------CFKCGGYGHLARDCIT 205
G CY CG+P H ARDCP GG GG CFKCG GH+ARDC
Sbjct: 123 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDC-- 180
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG------------SCFNCGKPGHFAREC 253
S GGGGG CYNCG++GH+ARDC +GG GGGG SC+NCG+ GH AR+C
Sbjct: 181 --SSGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHIARDC 238
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 18/59 (30%)
Query: 214 GRCYNCGKSGHLARDCGAG------------------GAGGGGSCFNCGKPGHFARECT 254
G CY CG+ GH+ARDC + G GGGG CF CG+PGH AR+C+
Sbjct: 123 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCS 181
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG-------GCYNCGDPEHFARDCP 174
CYNC GH+AR+C S G CYNCG+ H ARDCP
Sbjct: 189 CYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHIARDCP 239
>gi|255082406|ref|XP_002504189.1| predicted protein [Micromonas sp. RCC299]
gi|226519457|gb|ACO65447.1| predicted protein [Micromonas sp. RCC299]
Length = 938
Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+ CG P H AR+CP G + C CG GH+ARDC +G C+ C
Sbjct: 646 CHKCGMPGHIARECPNAPGEQRT-------CHVCGEGGHIARDC-PQGPSRPEERACHVC 697
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G+SGHLARDC +C NCGKPGH A EC
Sbjct: 698 GESGHLARDCPQS------TCHNCGKPGHRAAEC 725
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH+AREC N C+ CG+ H ARDCP QG S C
Sbjct: 646 CHKCGMPGHIAREC------PNAPGEQRTCHVCGEGGHIARDCP--QGPSRPEER---AC 694
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
CG GHLARDC C+NCGK GH A +C C CG+ GH A
Sbjct: 695 HVCGESGHLARDCPQ--------STCHNCGKPGHRAAECPEA------RCRRCGEKGHMA 740
Query: 251 REC 253
R+C
Sbjct: 741 RDC 743
>gi|71398909|ref|XP_802672.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70864476|gb|EAN81226.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +R+C+ N C+ CG P H ++DC ++ + +
Sbjct: 1 MVCYRCGGVGHTSRDCSR-------PVNESLCFRCGKPGHMSKDC------ASDIDVKNA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPG 247
CF C GH A +C + CY CG+ GH++RDC SCF+C K G
Sbjct: 48 PCFFCQQAGHRANNCPL--APPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTG 105
Query: 248 HFARECTKVAN 258
H+AREC +V
Sbjct: 106 HYARECPEVIE 116
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R+CT N + C++C H+AR+CP + C
Sbjct: 73 CYRCGEEGHISRDCT----NPRLPRSEQSCFHCHKTGHYARECPEVI--------ENLKC 120
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPGHF 249
CG GH+AR C R C+ CG GH+AR+C G C+ CG+ GH
Sbjct: 121 NSCGVTGHIARRCPERIRAARAFYPCFRCGMQGHVARNCPNTRLPYEGQLCYVCGEKGHL 180
Query: 250 ARECTKVA 257
AR+C A
Sbjct: 181 ARDCKSEA 188
>gi|426249735|ref|XP_004018605.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Ovis
aries]
Length = 169
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH+A++C +R CYNCG P H ARDC + + C
Sbjct: 66 CYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQKC 111
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH A
Sbjct: 112 YSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHLA 160
Query: 251 RECTKVAN 258
RECT A
Sbjct: 161 RECTIEAT 168
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG G A+D I
Sbjct: 2 SSNECFKCGRSGHWARECPAGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGPPAKDWI 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GG CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 R-------GGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 103
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CYNCG H A+DC + C+ CG GHLARDC +CY
Sbjct: 64 GPCYNCGRGGHIAKDCKEPK------REREQCCYNCGKPGHLARDC-----DHADEQKCY 112
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CG+ GH+ +DC C+ CG+ GH A C+K +
Sbjct: 113 SCGEFGHIQKDCTKV------KCYRCGETGHVAINCSKTSE 147
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 61/138 (44%), Gaps = 28/138 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ A+D R
Sbjct: 6 CFKCGRSGHWARECPAGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGPPAKDWIR--- 62
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
G C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 63 --------GGPCYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADEQ--- 109
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 110 KCYSCGEFGHIQKDCTKV 127
>gi|322710312|gb|EFZ01887.1| zinc knuckle domain protein [Metarhizium anisopliae ARSEF 23]
Length = 182
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 23/143 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GH++R+C+ + + CY CG P H +R+CP G
Sbjct: 31 GPAKCYNCGGEGHMSRDCSEPMKENK------SCYKCGQPGHISRECPLGGAGGAG-GAQ 83
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGG-----------RCYNCGKSGHLARDCGAGGAG 235
S C+KCG GH+AR+C G GG CY+CG GH++R+C
Sbjct: 84 STECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECV----- 138
Query: 236 GGGSCFNCGKPGHFARECTKVAN 258
G C+NCG+ GH++R+C K ++
Sbjct: 139 NGMKCYNCGESGHYSRDCPKESS 161
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 150 NSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSG 209
+SN G CY+CG+P H ARDCP + C+ CGG GH++RDC
Sbjct: 4 SSNTGATRGACYSCGNPGHQARDCP---------SKGPAKCYNCGGEGHMSRDC---SEP 51
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGG-----GGSCFNCGKPGHFARECTK 255
CY CG+ GH++R+C GGAGG C+ CG+ GH AR C+K
Sbjct: 52 MKENKSCYKCGQPGHISRECPLGGAGGAGGAQSTECYKCGEIGHIARNCSK 102
>gi|149728229|ref|XP_001488727.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Equus caballus]
gi|291393358|ref|XP_002713211.1| PREDICTED: zinc finger protein 9 isoform 3 [Oryctolagus cuniculus]
gi|296225968|ref|XP_002758717.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Callithrix jacchus]
gi|332261809|ref|XP_003279959.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Nomascus leucogenys]
gi|397518584|ref|XP_003829464.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Pan
paniscus]
gi|402887091|ref|XP_003906938.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037475|ref|XP_003950235.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951818|ref|XP_003982590.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Felis
catus]
gi|16549164|dbj|BAB70769.1| unnamed protein product [Homo sapiens]
gi|119599677|gb|EAW79271.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
gi|119599680|gb|EAW79274.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
Length = 167
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 63 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 108
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 109 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 157
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 158 ARECTIEAT 166
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 156 NSGGCYNCGDPEHFARDCP--------RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
+S C+ CG H+AR+CP + G + ++ C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 DA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 101
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 24/135 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSN---------YNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C GH AREC + + ++ CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDA-- 63
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ CG GH+A+DC + CYNCGK GHLARDC C+
Sbjct: 64 --------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---QKCY 110
Query: 242 NCGKPGHFARECTKV 256
+CG+ GH ++CTKV
Sbjct: 111 SCGEFGHIQKDCTKV 125
>gi|47026923|gb|AAT08682.1| ring zinc finger protein [Hyacinthus orientalis]
Length = 196
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
VC NC GH+A ECT+ C+NC +P H A +C +N
Sbjct: 63 VCNNCGLPGHIAAECTA----------KTLCWNCKEPGHMANEC-----------SNEAV 101
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C C GHLARDC G C NC + GH+A DC +C NC KPGH
Sbjct: 102 CHNCNKTGHLARDCSASGLSSFDTRLCNNCHRPGHIAADC-----TNDKTCNNCRKPGHL 156
Query: 250 ARECT 254
ARECT
Sbjct: 157 ARECT 161
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 21/100 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
VC+NC+ GH+AR+C+++ +S ++ C NC P H A DC N
Sbjct: 101 VCHNCNKTGHLARDCSASGLSSF---DTRLCNNCHRPGHIAADC-----------TNDKT 146
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C C GHLAR+C C C SGH+AR C
Sbjct: 147 CNNCRKPGHLARECT-------NDPVCNVCNVSGHVARQC 179
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C C GH ARDC C NCG GH+A +C A C+NC +PGH
Sbjct: 45 CKNCKRPGHFARDC-------SHIAVCNNCGLPGHIAAECTAKTL-----CWNCKEPGHM 92
Query: 250 ARECTKVA 257
A EC+ A
Sbjct: 93 ANECSNEA 100
>gi|294943015|ref|XP_002783737.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239896385|gb|EER15533.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 110
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 130 VCYNCDGVGHVARECTSN-RRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C+ GH AR C +S CYNCG P+H ARDCP+ Q N
Sbjct: 9 ACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQS-------NDR 61
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
CFKC GH ARDC + + C+ CG+SGHLAR+C
Sbjct: 62 PCFKCQQVGHFARDCPSADTRN-----CFRCGQSGHLAREC 97
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRC 216
S C+ C + H+AR+CPRQ + C+ CG HLARDC S C
Sbjct: 7 SQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRP---C 63
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ C + GH ARDC + CF CG+ GH AREC
Sbjct: 64 FKCQQVGHFARDCPSADTRN---CFRCGQSGHLAREC 97
>gi|224033259|gb|ACN35705.1| unknown [Zea mays]
Length = 110
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 40/57 (70%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
MA R G V WF+ KG+GFI P+DG DLFVHQ SIKS+G+R+L E + VEF V
Sbjct: 1 MAAAARQRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSV 57
>gi|311107315|ref|YP_003980168.1| cold shock-like protein CspG [Achromobacter xylosoxidans A8]
gi|310762004|gb|ADP17453.1| cold shock-like protein CspG [Achromobacter xylosoxidans A8]
Length = 94
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ AKG+GFI PDDGG DLF H SI+ +G++TL E Q V F++ GK
Sbjct: 28 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVAFEIIQGPKGK- 86
Query: 66 QALDVTA 72
QAL++TA
Sbjct: 87 QALNITA 93
>gi|335772494|gb|AEH58085.1| cellular nucleic acid-binding protein-like protein, partial [Equus
caballus]
Length = 166
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 62 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 107
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 108 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 156
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 157 ARECTIEAT 165
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 2 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 61
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 62 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 106
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 107 KCYSCGEFGHIQKDCTKV 124
>gi|225458095|ref|XP_002279453.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 254
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
NN R + P +C NC+ GH+A ECT+ C+NC +P H A +
Sbjct: 52 NNCKRPGHFARECPNVAICNNCNLPGHIASECTT----------QSLCWNCREPGHMASN 101
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
CP N G C C GH ARDC T G G C NC K GH+A DC
Sbjct: 102 CP-----------NEGICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTND 150
Query: 233 GAGGGGSCFNCGKPGHFAREC 253
A C NC K GH AR+C
Sbjct: 151 KA-----CKNCRKTGHIARDC 166
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 55/134 (41%), Gaps = 35/134 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH+A +CT N C NC H ARDC N
Sbjct: 133 LCNNCYKQGHIAADCT----------NDKACKNCRKTGHIARDC-----------QNEPV 171
Query: 190 CFKCGGYGHLARDCITRGSGG--GGGGR--------CYNCGKSGHLARDCGAGGAGGGGS 239
C C GH+AR C G GGGGR C +C + GH++RDC
Sbjct: 172 CNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDCMVSLV----I 227
Query: 240 CFNCGKPGHFAREC 253
C NCG GH A EC
Sbjct: 228 CNNCGGRGHMAFEC 241
>gi|213623438|gb|AAI69746.1| CNBP protein [Xenopus laevis]
Length = 178
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCD---------HADEHK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 62/146 (42%), Gaps = 35/146 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFA 170
C+ C GH AREC + G CY CG+ H A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 KDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCD 113
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 HADEH---KCYSCGEFGHIQKDCTKV 136
>gi|169616856|ref|XP_001801843.1| hypothetical protein SNOG_11604 [Phaeosphaeria nodorum SN15]
gi|111060192|gb|EAT81312.1| hypothetical protein SNOG_11604 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 70/153 (45%), Gaps = 35/153 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP---------------- 174
CY+C G+GHV +C + R + SG CY+CG H AR+CP
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGA--GTSGRCYSCGLAGHLARNCPNPGMQGAGRGAGGPPA 110
Query: 175 ------RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
+ G + C+KCGG H ARDC + +CY CGK GH++RD
Sbjct: 111 RGGFGGFRGGFQGQGGARAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRD 164
Query: 229 CGAG-----GAGGGGSCFNCGKPGHFARECTKV 256
C A G G +C+ CG+ GH +R C +
Sbjct: 165 CTAASGGPNGLEAGKTCYRCGETGHISRNCAQA 197
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 66/157 (42%), Gaps = 44/157 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C +GH A C+S+ R CYNC P H + CP + +
Sbjct: 8 ACFKCGNIGHYAEVCSSSERL---------CYNCKQPGHESNGCPHPR------TTETKQ 52
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGA-------------- 234
C+ C G GH+ DC T R SG G GRCY+CG +GHLAR+C G
Sbjct: 53 CYHCQGLGHVQADCPTLRLSGAGTSGRCYSCGLAGHLARNCPNPGMQGAGRGAGGPPARG 112
Query: 235 --------------GGGGSCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 113 GFGGFRGGFQGQGGARAATCYKCGGPNHFARDCQAQA 149
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 38/136 (27%)
Query: 131 CYNCDGVGHVARECT-----------------------SNRRNSNYNNNSGGCYNCGDPE 167
CY+C GH+AR C + CY CG P
Sbjct: 80 CYSCGLAGHLARNCPNPGMQGAGRGAGGPPARGGFGGFRGGFQGQGGARAATCYKCGGPN 139
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGG----GGGRCYNCGKSG 223
HFARDC Q + C+ CG GH++RDC T SGG G CY CG++G
Sbjct: 140 HFARDCQAQ----------AMKCYACGKLGHISRDC-TAASGGPNGLEAGKTCYRCGETG 188
Query: 224 HLARDCGAGGAGGGGS 239
H++R+C G S
Sbjct: 189 HISRNCAQAEVNGDSS 204
>gi|189303765|gb|ACD85807.1| cellular nucleic acid-binding protein [Ctenopharyngodon idella]
Length = 163
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++R+C ++ CYNCG H ARDC + N C
Sbjct: 60 CYNCHRSGHISRDCKEPKKE-----REQCCYNCGKAGHVARDCD---------HANEQKC 105
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH A
Sbjct: 106 YSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHLA 154
Query: 251 RECTKVAN 258
RECT A+
Sbjct: 155 RECTIEAS 162
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + + C+ C GH++RDC + CYNC
Sbjct: 40 CYRCGEQGHIARDCEQTEDA----------CYNCHRSGHISRDC--KEPKKEREQCCYNC 87
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+ARDC C++CG GH + C KV
Sbjct: 88 GKAGHVARDCDHANEQ---KCYSCGGFGHIQKLCDKV 121
>gi|326483283|gb|EGE07293.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 210
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + + CY CG H +R+CP G N+Y+
Sbjct: 46 GTPTCYNCGGQGHVSRECTQPPKEKS-------CYRCGMTGHISRECPSSGSGDNNYSGG 98
Query: 187 SGG------CFKCGGYGHLARDCITRGSGGGGGG-------------------RCYNCGK 221
G C+KCG GH+AR+C +G G GGG CY+CG
Sbjct: 99 YSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGG 158
Query: 222 SGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 159 YGHMARDCTQ-----GQKCYNCGEVGHVSRDCPTEAK 190
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 65/150 (43%), Gaps = 30/150 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSN-------YNNNSGGCYNCGDPEHFARDCPRQQG 178
P CY C GH++REC S+ N + CY CG H AR+C +Q G
Sbjct: 67 PKEKSCYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGG 126
Query: 179 GSNSYNN---------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
S C+ CGGYGH+ARDC G +CYNCG+ G
Sbjct: 127 SGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARDCTQ-------GQKCYNCGEVG 179
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
H++RDC A G C+ C + GH C
Sbjct: 180 HVSRDCPT-EAKGERVCYKCKQAGHVQAAC 208
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 40/152 (26%)
Query: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCG 194
DG G + R R + CYNCG H +R+C + C++CG
Sbjct: 26 DGTG-IPRPQLPLRARDCPKKGTPTCYNCGGQGHVSREC--------TQPPKEKSCYRCG 76
Query: 195 GYGHLARDCITRGSG----------GGGGGRCYNCGKSGHLARDCGAGGAGGGG------ 238
GH++R+C + GSG G GG CY CG+ GH+AR+C G G G
Sbjct: 77 MTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNS 136
Query: 239 ---------------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 137 GSGSYGSGGYGGRSQTCYSCGGYGHMARDCTQ 168
>gi|291393360|ref|XP_002713212.1| PREDICTED: zinc finger protein 9 isoform 4 [Oryctolagus cuniculus]
gi|296225970|ref|XP_002758718.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Callithrix jacchus]
gi|332261813|ref|XP_003279961.1| PREDICTED: cellular nucleic acid-binding protein isoform 5
[Nomascus leucogenys]
gi|338714532|ref|XP_003363103.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|397518586|ref|XP_003829465.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Pan
paniscus]
gi|402887093|ref|XP_003906939.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037477|ref|XP_003950236.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951820|ref|XP_003982591.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Felis
catus]
gi|194389826|dbj|BAG60429.1| unnamed protein product [Homo sapiens]
Length = 160
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 56 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 101
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 102 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 150
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 151 ARECTIEAT 159
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-CFKCGGYGHLARDCITRGSGGGGGG 214
+S C+ CG H+AR+CP G + C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDA----- 56
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 57 -CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 94
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDA--------- 56
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GH+A+DC + CYNCGK GHLARDC C++CG+ GH
Sbjct: 57 -CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---QKCYSCGEFGH 110
Query: 249 FARECTKV 256
++CTKV
Sbjct: 111 IQKDCTKV 118
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC P+++ YN
Sbjct: 36 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN--- 83
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 84 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGETG 127
Query: 248 HFARECTKVAN 258
H A C+K +
Sbjct: 128 HVAINCSKTSE 138
>gi|407803333|ref|ZP_11150169.1| cold-shock domain-contain protein [Alcanivorax sp. W11-5]
gi|407022702|gb|EKE34453.1| cold-shock domain-contain protein [Alcanivorax sp. W11-5]
Length = 90
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TGKV WF+ AKGYGFIRPD GG DLFVH I+ DGYR+L Q VE+++Q +A+ Y
Sbjct: 2 ATGKVKWFNNAKGYGFIRPDAGGEDLFVHYSYIQMDGYRSLKAGQPVEYELQ-QANKGYH 60
Query: 67 ALDV 70
A+++
Sbjct: 61 AVNL 64
>gi|4929293|gb|AAD33937.1|AF144698_1 cellular nucleic acid binding protein [Rhinella arenarum]
Length = 178
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 62/146 (42%), Gaps = 35/146 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFA 170
C+ C GH AREC + G CY CG+ H A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 KDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCE 113
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 HADEQ---KCYSCGEFGHIQKDCTKV 136
>gi|284925124|ref|NP_001165425.1| cellular nucleic acid binding protein b [Xenopus laevis]
gi|1531585|emb|CAA69031.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 178
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H A+DC Q+ C+ CG GH+A+DC + CYNC
Sbjct: 55 CYRCGESGHLAKDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNC 102
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK GHLARDC C++CG+ GH ++CTKV
Sbjct: 103 GKPGHLARDCEHADEQ---KCYSCGEFGHIQKDCTKV 136
>gi|402910570|ref|XP_003917942.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Papio anubis]
Length = 170
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC GH+A++C +R N + CY CG H A DC RQ+
Sbjct: 64 GNICYNCGRSGHIAKDCKEPKRERNQH-----CYTCGRLGHLAYDCDRQK---------E 109
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG GH+ +DC +CY CG++GH+A +C +C+ CG+ G
Sbjct: 110 QKCYSCGKLGHIQKDC--------AQVKCYRCGETGHVAINCSKASQ---VNCYRCGESG 158
Query: 248 HFARECTKVAN 258
H AREC A
Sbjct: 159 HLARECPSEAT 169
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
S S C++CG +GH A++C+ G+ CYNCG+SGH+A+DC C+
Sbjct: 39 SSTTLSYTCYRCGEFGHHAKNCVLLGNI------CYNCGRSGHIAKDCKEPKRERNQHCY 92
Query: 242 NCGKPGHFARECTK 255
CG+ GH A +C +
Sbjct: 93 TCGRLGHLAYDCDR 106
>gi|345329903|ref|XP_003431441.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 167
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 63 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 108
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 109 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 157
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 158 ARECTIEAT 166
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 24/135 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSN---------YNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C GH AREC + +++ CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGLRSRGRGGFSSGRDICYRCGESGHLAKDCDLQEDA-- 63
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ CG GH+A+DC + CYNCGK GHLARDC C+
Sbjct: 64 --------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADEQ---KCY 110
Query: 242 NCGKPGHFARECTKV 256
+CG+ GH ++CTKV
Sbjct: 111 SCGEFGHIQKDCTKV 125
>gi|330935739|ref|XP_003305108.1| hypothetical protein PTT_17855 [Pyrenophora teres f. teres 0-1]
gi|311318054|gb|EFQ86821.1| hypothetical protein PTT_17855 [Pyrenophora teres f. teres 0-1]
Length = 312
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 87 NNNSGYNNNRGG---RGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARE 143
N S YNN GG R G G G+ K + G GG C+NC VGH +
Sbjct: 99 TNTSSYNNTGGGGDDRACFGCGMTGHQKRDCPQ--------GSGGQACFNCGEVGHRKSD 150
Query: 144 CTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
CT+ R+ + C+NC P H +CP + G C CG GH++RDC
Sbjct: 151 CTAPRKPMGGTDRV--CFNCNLPGHNKSECPEPRTGGGGGGR---ACHNCGDEGHISRDC 205
Query: 204 ITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+GGGGGGR C+NCG+ GH++RDC C NC + GH +REC K
Sbjct: 206 DKPRTGGGGGGRACHNCGEEGHISRDCDKPRVM---KCRNCDEEGHHSRECDK 255
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 83/167 (49%), Gaps = 28/167 (16%)
Query: 101 GGGAGFG---GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNS 157
GG A FG + N S NN GG G C+ C GH R+C S
Sbjct: 84 GGNAEFGSSNAFTTATNTSSYNNTGGGG-DDRACFGCGMTGHQKRDCP---------QGS 133
Query: 158 GG--CYNCGDPEHFARDC--PRQ-QGGSNSYNNNSGGCFKCGGYGHLARDCI-TRGSGGG 211
GG C+NCG+ H DC PR+ GG++ CF C GH +C R GGG
Sbjct: 134 GGQACFNCGEVGHRKSDCTAPRKPMGGTDRV------CFNCNLPGHNKSECPEPRTGGGG 187
Query: 212 GGGRCYNCGKSGHLARDCG---AGGAGGGGSCFNCGKPGHFARECTK 255
GG C+NCG GH++RDC GG GGG +C NCG+ GH +R+C K
Sbjct: 188 GGRACHNCGDEGHISRDCDKPRTGGGGGGRACHNCGEEGHISRDCDK 234
>gi|291409842|ref|XP_002721203.1| PREDICTED: cellular nucleic acid binding protein-like isoform 2
[Oryctolagus cuniculus]
Length = 161
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 57 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 102
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 103 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 151
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 152 ARECTIEAT 160
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-CFKCGGYGHLARDCITRGSGGGGGG 214
+S C+ CG H+AR+CP G + C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDEA---- 57
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 58 -CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 95
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQE---------DE 56
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GH+A+DC + CYNCGK GHLARDC C++CG+ GH
Sbjct: 57 ACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---QKCYSCGEFGH 111
Query: 249 FARECTKV 256
++CTKV
Sbjct: 112 IQKDCTKV 119
>gi|307107809|gb|EFN56051.1| hypothetical protein CHLNCDRAFT_145510 [Chlorella variabilis]
Length = 139
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V W GYGFI PD GG DLFVHQ +I S+G+R+L E + VEF V+ DG+
Sbjct: 5 KATGTVKW-----GYGFITPDSGGEDLFVHQTAIVSEGFRSLREGEPVEFFVETSDDGRQ 59
Query: 66 QALDVTAPGGA 76
+A++VT P GA
Sbjct: 60 KAVNVTGPNGA 70
>gi|255947154|ref|XP_002564344.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591361|emb|CAP97588.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 487
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 74/197 (37%), Gaps = 28/197 (14%)
Query: 77 PVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDG 136
P + N NN+G R G G+ + R +G + C NCDG
Sbjct: 257 PADADDNLERMNNAGIPYERKVPKCLNCGELGHISRSCKEERADGNDRT--EIKCSNCDG 314
Query: 137 VGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSGG----- 189
VGH R+C RRN + GC NCG EH A +C PR N G
Sbjct: 315 VGHRVRDCRQQRRNKH------GCRNCGSVEHIASECTEPRSAADVECRKCNETGHFAKD 368
Query: 190 -----------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C CG H+ARDC C NC K+GH +RDC
Sbjct: 369 CPNVADRGPRTCRNCGSEDHIARDCDQ--PRDVSTVTCRNCEKTGHYSRDCDQPKDWSKV 426
Query: 239 SCFNCGKPGHFARECTK 255
C NCG+ GH C +
Sbjct: 427 QCKNCGEMGHTVVRCRQ 443
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 110 WKGNND---SRRNNGG-GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGD 165
W + D R NN G Y C NC +GH++R C R + N + C NC
Sbjct: 256 WPADADDNLERMNNAGIPYERKVPKCLNCGELGHISRSCKEERADGN-DRTEIKCSNCDG 314
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHL 225
H RDC RQQ N GC CG H+A +C S C C ++GH
Sbjct: 315 VGHRVRDC-RQQ------RRNKHGCRNCGSVEHIASECTEPRSAADV--ECRKCNETGHF 365
Query: 226 ARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
A+DC G +C NCG H AR+C +
Sbjct: 366 AKDCPNVADRGPRTCRNCGSEDHIARDCDQ 395
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
Y C NCG+ H +R C ++ N + C C G GH RDC + G
Sbjct: 274 YERKVPKCLNCGELGHISRSCKEERADGN--DRTEIKCSNCDGVGHRVRDCRQQRRNKHG 331
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
C NCG H+A +C + C C + GHFA++C VA+
Sbjct: 332 ---CRNCGSVEHIASECTEPRSAADVECRKCNETGHFAKDCPNVAD 374
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 55/161 (34%), Gaps = 38/161 (23%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNR-----RNSNYNN------------------ 155
N G G C C GH+ R+C ++ R+SN N
Sbjct: 2 ENIHGAHDDGFTCGQCGKPGHMTRQCPNDSVPLGARDSNAGNAYGNYNDGNGGGYGEYAG 61
Query: 156 -NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
CYNCG H +CP + +G CF CG GH +C G
Sbjct: 62 GGGRACYNCGQEGHSKAECPEPR--------KTGSCFNCGQEGHSKSECT---KPRVFKG 110
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C K GH A DC C NC GH EC +
Sbjct: 111 TCRICEKEGHPAVDCPERPP---DVCKNCQTEGHKTMECKE 148
>gi|367012391|ref|XP_003680696.1| hypothetical protein TDEL_0C05960 [Torulaspora delbrueckii]
gi|359748355|emb|CCE91485.1| hypothetical protein TDEL_0C05960 [Torulaspora delbrueckii]
Length = 157
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 21/125 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ--GGSNSYNNNSG 188
CYNC GHV EC R CYNC H +R+C ++ S+S ++
Sbjct: 49 CYNCGETGHVKTECAIQR-----------CYNCNQTGHISRECTEEKKYPPSSSSRSSKV 97
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C++CGG H+A+DC+ GS +CY+CG GHL++DC +G G C+NC + GH
Sbjct: 98 SCYRCGGPNHMAKDCLQSGS------KCYSCGTFGHLSKDCPSG--PGEKICYNCNETGH 149
Query: 249 FAREC 253
+R+C
Sbjct: 150 ISRDC 154
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 48/125 (38%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C +GH+A EC S R CYNC P H DC + +
Sbjct: 6 CYVCGKIGHLAEECDSERL----------CYNCNQPGHVQSDCTLPRTVEHK-------- 47
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+CYNCG++GH+ +C C+NC + GH +
Sbjct: 48 ------------------------QCYNCGETGHVKTECAIQ------RCYNCNQTGHIS 77
Query: 251 RECTK 255
RECT+
Sbjct: 78 RECTE 82
>gi|317138215|ref|XP_001816756.2| zinc knuckle transcription factor (CnjB) [Aspergillus oryzae RIB40]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 56/127 (44%), Gaps = 22/127 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C NC VGH AR+CT RR + C NCG EH A +CP +
Sbjct: 303 VKCVNCSAVGHRARDCTEPRR------DRFACRNCGSSEHKAAECPNPRSAEGVE----- 351
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
+GH A+DC C NCG H+ARDC +C NC + GH
Sbjct: 352 -------FGHFAKDC----PQAPAPRTCRNCGSEDHIARDCDKPRDISTVTCRNCDEVGH 400
Query: 249 FARECTK 255
F+R+C K
Sbjct: 401 FSRDCPK 407
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
N N N G FK G+G A + + G+ +C NCG GH AR+C G +C
Sbjct: 23 NDENANPSGNFKDDGFGGNAWENTSAGNEQNDDNKCRNCGSDGHFARNCPE--PRKGMAC 80
Query: 241 FNCGKPGHFARECTK 255
FNCG+ GH ECTK
Sbjct: 81 FNCGEEGHSKAECTK 95
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C NC H+AR+C R S C NC + HF+RDCP+++ S
Sbjct: 362 APAPRTCRNCGSEDHIARDCDKPRDISTVT-----CRNCDEVGHFSRDCPKKKDWSKVKC 416
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
NN CG GH + C + G G
Sbjct: 417 NN------CGEMGHTVKRCPSAVVNDTGMG 440
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGG 211
N N+ C NCG HFAR+CP + G CF CG GH +C G
Sbjct: 50 NEQNDDNKCRNCGSDGHFARNCPEPRKGM--------ACFNCGEEGHSKAECTKPRVFKG 101
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C + GH A C C NC GH +C +
Sbjct: 102 T---CRVCNQEGHPASQCPERPP---DVCKNCKMEGHRTIDCKE 139
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG-SGGGGGGRCYNCGKSGH 224
PE + R + Y+ C CG GH AR C +C NC GH
Sbjct: 254 PESVEENLERLEDAGIPYDREIPKCSNCGEMGHTARGCKEEHVVHERVEVKCVNCSAVGH 313
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFAREC 253
ARDC +C NCG H A EC
Sbjct: 314 RARDC-TEPRRDRFACRNCGSSEHKAAEC 341
>gi|148666813|gb|EDK99229.1| cellular nucleic acid binding protein, isoform CRA_b [Mus musculus]
Length = 140
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 36 ACYNCGRGGHIAKDCKEPKRE-----REQCCYNCGKPGHLARDCD---------HADEQK 81
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 82 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 130
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 131 ARECTIEAT 139
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG-GCFKCGGYGHLARDCITRGSGGGGGG 214
+S C+ CG H+AR+CP G + C+ CG GH+A+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGACYNCGRGGHIAKDC--KEPKREREQ 59
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNCGK GHLARDC C++CG+ GH ++CTKV
Sbjct: 60 CCYNCGKPGHLARDCDHADEQ---KCYSCGEFGHIQKDCTKV 98
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 23/132 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG--GCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
C+ C GH AREC + + G CYNCG H A+DC P+++ YN
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGACYNCGRGGHIAKDCKEPKREREQCCYN-- 63
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+
Sbjct: 64 ------CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGET 106
Query: 247 GHFARECTKVAN 258
GH A C+K +
Sbjct: 107 GHVAINCSKTSE 118
>gi|390344347|ref|XP_003726100.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1
[Strongylocentrotus purpuratus]
Length = 168
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHFARDCP--RQQGGSNSYN 184
CYNC GH++R+C G CY CG +H AR+CP +
Sbjct: 33 TCYNCGQPGHISRDCPQGDSRGGGGGRGGSDRACYGCGATDHMARECPNSKGDSRGGGRG 92
Query: 185 NNSGGCFKCGGYGHLARDC----ITRGSGGGGGGRCYNCGKSGHLARDCGAGG-AGGGGS 239
C+ CG GH++RDC G GGG CY CG +GH++RDC GG +
Sbjct: 93 GGDRTCYNCGQPGHISRDCPQGDSRGGGRGGGDRTCYKCGITGHISRDCSNGGDSSYSDK 152
Query: 240 CFNCGKPGHFARECTK 255
C+ CG GHFA+EC+K
Sbjct: 153 CYKCGDSGHFAKECSK 168
>gi|110834144|ref|YP_693003.1| cold-shock domain-contain protein [Alcanivorax borkumensis SK2]
gi|110647255|emb|CAL16731.1| cold-shock domain family protein [Alcanivorax borkumensis SK2]
Length = 84
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG+V WF+ AKGYGF+RPD+GG DLFVH I+ DGY++L Q VE+DVQ A+ Y
Sbjct: 2 ATGRVKWFNNAKGYGFVRPDEGGEDLFVHYSYIQMDGYKSLKAGQPVEYDVQ-PANKGYH 60
Query: 67 ALDV 70
A+++
Sbjct: 61 AINL 64
>gi|58004792|gb|AAW62457.1| cellular nucleic acid binding protein mutant 2-7 [synthetic
construct]
Length = 128
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 24 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 69
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 70 CYSCGEFGHIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 118
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 119 ARECTIEAT 127
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H A+DC Q+ C+ CG GH+A+DC + CYNC
Sbjct: 5 CYRCGESGHLAKDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNC 52
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK GHLARDC C++CG+ GH ++CTKV
Sbjct: 53 GKPGHLARDCEHADE---QKCYSCGEFGHIQKDCTKV 86
>gi|213521422|gb|ACJ50597.1| zinc finger protein [Lutzomyia shannoni]
Length = 150
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 129 VVCYNCDGVGHVARECTSN---RRN-----SNYNNNSGGCYNCGDPEHFARDCPRQQ--- 177
CY C+ GH ARECT+ R+ SNY N CY C HFAR+C +
Sbjct: 4 TTCYKCNRPGHFARECTAGVGGPRDKMGGGSNYGRNREKCYKCNQTGHFARECKEEADRC 63
Query: 178 ---------GGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
S + + C+ C GHLAR C + CYNC KSGH++R
Sbjct: 64 YRCNGTGHIARECSQSADDPSCYNCNKTGHLARHCPEQIDNRQSMS-CYNCNKSGHISRH 122
Query: 229 CGAGGAGGGGSCFNCGKPGHFARECTK 255
C GG SC+ CGK GH +REC +
Sbjct: 123 CPEGGK----SCYICGKLGHISRECDQ 145
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 156 NSGGCYNCGDPEHFARDC------PR-QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGS 208
+S CY C P HFAR+C PR + GG ++Y N C+KC GH AR+C
Sbjct: 2 SSTTCYKCNRPGHFARECTAGVGGPRDKMGGGSNYGRNREKCYKCNQTGHFARECKEEAD 61
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
RCY C +GH+AR+C + SC+NC K GH AR C +
Sbjct: 62 ------RCYRCNGTGHIARECSQ--SADDPSCYNCNKTGHLARHCPE 100
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+G GH+AREC+ + + CYNC H AR CP Q N S C
Sbjct: 63 CYRCNGTGHIARECSQS-------ADDPSCYNCNKTGHLARHCPEQID-----NRQSMSC 110
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ C GH++R C GG CY CGK GH++R+C G
Sbjct: 111 YNCNKSGHISRHCPE------GGKSCYICGKLGHISRECDQNG 147
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 186 NSGGCFKCGGYGHLARDCIT-----RGSGGGGGG------RCYNCGKSGHLARDCGAGGA 234
+S C+KC GH AR+C R GGG +CY C ++GH AR+C
Sbjct: 2 SSTTCYKCNRPGHFARECTAGVGGPRDKMGGGSNYGRNREKCYKCNQTGHFARECKEEA- 60
Query: 235 GGGGSCFNCGKPGHFARECTKVAN 258
C+ C GH AREC++ A+
Sbjct: 61 ---DRCYRCNGTGHIARECSQSAD 81
>gi|387017354|gb|AFJ50795.1| Cellular nucleic acid binding protein [Crotalus adamanteus]
Length = 171
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 36/145 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG----------------CYNCGDPEHFARDC 173
+CY C GH+A++C + YN GG CYNCG P H ARDC
Sbjct: 46 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ + C+ CG +GH+ +DC +CY CG++GH+A +C
Sbjct: 106 D---------HADEQKCYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTS 148
Query: 234 AGGGGSCFNCGKPGHFARECTKVAN 258
+C+ CG+ GH ARECT A
Sbjct: 149 E---VNCYRCGESGHLARECTIEAT 170
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 22/112 (19%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ--------------QGGSNSYNNNSGGCFKCGGYGHLAR 201
+S C+ CG H+AR+CP Q S+S + C++CG GHLA+
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDI---CYRCGESGHLAK 58
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 DCDLQEDEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 26/138 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQE- 64
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 65 --------DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 111
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 112 KCYSCGEFGHIQKDCTKV 129
>gi|449532848|ref|XP_004173390.1| PREDICTED: DNA-binding protein HEXBP-like, partial [Cucumis
sativus]
Length = 425
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 29/147 (19%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C GH+ C N + + CY CG H C R +G + S +S
Sbjct: 281 IQCYICQKFGHLC--CV----NFTSDTSVVSCYKCGQTGHTGLSCSRLRGEA-SGAVSSS 333
Query: 189 GCFKCGGYGHLARDCIT----------RGSGGGGGGRCYNCGKSGHLARDCGAG------ 232
C++CG GH AR+C + SG CY CG+ GH AR+C +
Sbjct: 334 QCYRCGDEGHFARECTSATKSGKRNREEASGAASPNPCYKCGEEGHFARECTSSTKGGKR 393
Query: 233 ------GAGGGGSCFNCGKPGHFAREC 253
GA SC+ CG+ GHFAREC
Sbjct: 394 ILEETSGAASPSSCYRCGEQGHFAREC 420
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR-QQGGSNSYNNNS 187
V CY C GH C+ R ++ +S CY CGD HFAR+C + G + S
Sbjct: 304 VSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEGHFARECTSATKSGKRNREEAS 363
Query: 188 GG-----CFKCGGYGHLARDC----------ITRGSGGGGGGRCYNCGKSGHLARDCG 230
G C+KCG GH AR+C + SG CY CG+ GH AR+C
Sbjct: 364 GAASPNPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQGHFARECA 421
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 59/159 (37%), Gaps = 37/159 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN--------- 181
C+ C GH A C +N + ++ C CGD H C +
Sbjct: 229 CFICKKSGHRANACPEKHKNGS--SSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYIC 286
Query: 182 -----------SYNNNSGGCFKCGGYGHLARDCIT---RGSGGGGGGRCYNCGKSGHLAR 227
+ + + C+KCG GH C SG +CY CG GH AR
Sbjct: 287 QKFGHLCCVNFTSDTSVVSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEGHFAR 346
Query: 228 DCG------------AGGAGGGGSCFNCGKPGHFARECT 254
+C A GA C+ CG+ GHFARECT
Sbjct: 347 ECTSATKSGKRNREEASGAASPNPCYKCGEEGHFARECT 385
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 56/143 (39%), Gaps = 23/143 (16%)
Query: 130 VCYNCDGVGHVARECTSNRR------------NSNYNNNSGGCYNCGDPEHFARDCP-RQ 176
CYNC GH A C S +R N+ + + C+ C H A CP +
Sbjct: 187 TCYNCGEEGHNAVNCKSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKSGHRANACPEKH 246
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITR-GSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ GS+S C KCG GH C +CY C K GHL C
Sbjct: 247 KNGSSSLRI----CLKCGDSGHDMFSCQNHYADDDLKKIQCYICQKFGHL---CCVNFTS 299
Query: 236 GGG--SCFNCGKPGHFARECTKV 256
SC+ CG+ GH C+++
Sbjct: 300 DTSVVSCYKCGQTGHTGLSCSRL 322
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 51/164 (31%), Gaps = 67/164 (40%)
Query: 158 GGCYNCGDPEHFARDC-------PRQQGGSNSYNNNSGG----CFKCGGYGHLARDCITR 206
G CYNCG+ H A +C P GS +N S CF C GH A C +
Sbjct: 186 GTCYNCGEEGHNAVNCKSAKRKRPCFVCGSLEHNAKSCSKARDCFICKKSGHRANACPEK 245
Query: 207 GSGGGGGGR--------------------------------------------------- 215
G R
Sbjct: 246 HKNGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYICQKFGHLCCVNFTSDTSVVS 305
Query: 216 CYNCGKSGHLARDCG-----AGGAGGGGSCFNCGKPGHFARECT 254
CY CG++GH C A GA C+ CG GHFARECT
Sbjct: 306 CYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEGHFARECT 349
>gi|189195318|ref|XP_001933997.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979876|gb|EDU46502.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 189
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNN--SGGCYNCGDPEHFARDCPRQQGG-------- 179
CY C G GH++RECT + S CY CG H AR+C QGG
Sbjct: 57 TCYRCGGTGHISRECTKDGGAPMGGRGGGSQECYKCGQVGHIARNC--SQGGGYSAGSRG 114
Query: 180 -------SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C+ CGG+GH++RDC G +CYNCG+ GHL+RDC
Sbjct: 115 GYGGGAAGGYGGARQTTCYSCGGFGHMSRDCTQ-------GQKCYNCGEVGHLSRDC-PQ 166
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
C+ C +PGH CT
Sbjct: 167 ETSSERVCYRCKQPGHVQSACT 188
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 40/149 (26%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H A EC + + CYNCG+ H +R+C Q C
Sbjct: 15 CYNCGDSSHRAAECPTK--------GTPTCYNCGEKGHVSRECTSPQAEKT--------C 58
Query: 191 FKCGGYGHLARDCI-----TRGSGGGGGGRCYNCGKSGHLARDCGAGG------------ 233
++CGG GH++R+C G GGG CY CG+ GH+AR+C GG
Sbjct: 59 YRCGGTGHISRECTKDGGAPMGGRGGGSQECYKCGQVGHIARNCSQGGGYSAGSRGGYGG 118
Query: 234 -------AGGGGSCFNCGKPGHFARECTK 255
+C++CG GH +R+CT+
Sbjct: 119 GAAGGYGGARQTTCYSCGGFGHMSRDCTQ 147
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
CY+C G GH++R+CT ++ CYNCG+ H +RDCP++ ++
Sbjct: 130 TTCYSCGGFGHMSRDCTQGQK----------CYNCGEVGHLSRDCPQE-------TSSER 172
Query: 189 GCFKCGGYGHLARDCI 204
C++C GH+ C
Sbjct: 173 VCYRCKQPGHVQSACT 188
>gi|16797820|gb|AAL29186.1|AF204398_1 poly-zinc finger protein 2 [Trypanosoma cruzi]
Length = 192
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +R+C+ N C+ CG P H ++DC ++ + +
Sbjct: 1 MVCYRCGGVGHTSRDCSR-------PVNESLCFRCGKPGHMSKDC------ASDIDVKNA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPG 247
CF C GH A +C + CY CG+ GH++RDC SCF+C K G
Sbjct: 48 PCFFCQQAGHRANNCPL--APPEARQPCYRCGEEGHISRDCTNPRLPRSKQSCFHCHKTG 105
Query: 248 HFARECTKVAN 258
H+AREC V
Sbjct: 106 HYARECRIVIE 116
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R+CT N + C++C H+AR+C + C
Sbjct: 73 CYRCGEEGHISRDCT----NPRLPRSKQSCFHCHKTGHYAREC--------RIVIENLKC 120
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGGGSCFNCGKPGHF 249
CG GH+AR C R C+ CG GH+AR+C C+ CG+ GH
Sbjct: 121 NSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQLCYVCGEKGHL 180
Query: 250 ARECTKVA 257
AR+C A
Sbjct: 181 ARDCKSEA 188
>gi|147899284|ref|NP_001084082.1| cellular nucleic acid binding protein [Xenopus laevis]
gi|1055224|gb|AAA81168.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 168
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 64 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCD---------HADEHR 109
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 110 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGESGHL 158
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 159 ARECTIEAT 167
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 15/107 (14%)
Query: 156 NSGGCYNCGDPEHFARDCP---------RQQGGSNSYNNNSGGCFKCGGYGHLARDCITR 206
+S C+ CG H+AR+CP + G ++++ C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHLAKDCDLQ 61
Query: 207 GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 EDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 102
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 25/136 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSN----------YNNNSGGCYNCGDPEHFARDCPRQQGGS 180
C+ C GH AREC + ++++ CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHLAKDCDLQE--- 62
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
C+ CG GH+A+DC + CYNCGK GHLARDC C
Sbjct: 63 -------DACYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCDHADE---HRC 110
Query: 241 FNCGKPGHFARECTKV 256
++CG+ GH ++CTKV
Sbjct: 111 YSCGEFGHIQKDCTKV 126
>gi|224084856|ref|XP_002307424.1| predicted protein [Populus trichocarpa]
gi|222856873|gb|EEE94420.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 45/64 (70%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WF KG+GFI PDDGG DLFVHQ SI+SDG+RTL + Q VEF V DG+ +A+
Sbjct: 1 GTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVDSGEDGRTKAV 60
Query: 69 DVTA 72
DV
Sbjct: 61 DVVG 64
>gi|395847274|ref|XP_003796305.1| PREDICTED: cellular nucleic acid-binding protein [Otolemur
garnettii]
Length = 185
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 156 NSGGCYNCGDPEHFARDCP--------RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
+S C+ CG H+AR+CP + G + ++ C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 DA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 101
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 24/135 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSN---------YNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C GH AREC + + ++ CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDA-- 63
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ CG GH+A+DC + CYNCGK GHLARDC C+
Sbjct: 64 --------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---QKCY 110
Query: 242 NCGKPGHFARECTKV 256
+CG+ GH ++CTKV
Sbjct: 111 SCGEFGHIQKDCTKV 125
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 20/100 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + CYNCG H A+DC
Sbjct: 43 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDC------KEPKREREQC 87
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ CG GHLARDC +CY+CG+ GH+ +DC
Sbjct: 88 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDC 122
>gi|388851384|emb|CCF54969.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Ustilago
hordei]
Length = 182
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP---RQQGGSNSYNNN 186
CY C+ GH++R+C +N + G CY CG H AR CP G
Sbjct: 49 TCYKCNETGHISRDCPTNPAPAA-GGPGGECYRCGQHGHIARACPDAGSSSRGGFGGARG 107
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGG------RCYNCGKSGHLARDCGAGGAGGGGSC 240
C+ CGG GHL+RDC + G G G RCYNC +SGH++R+C SC
Sbjct: 108 GRSCYNCGGVGHLSRDCTSPAGAGAGAGAGAGGQRCYNCNESGHISRECPKPQTK---SC 164
Query: 241 FNCGKPGHFARECTKVA 257
+ CG+ GH + C +VA
Sbjct: 165 YRCGEEGHISSACPQVA 181
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 65/144 (45%), Gaps = 24/144 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++ +C CY C + H +RDCP +
Sbjct: 24 GNPSCYNCGQQGHISSQC-------GMEAQPKTCYKCNETGHISRDCPTNPAPAAGGPGG 76
Query: 187 SGGCFKCGGYGHLARDCI-------TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
C++CG +GH+AR C G GG CYNCG GHL+RDC + G G+
Sbjct: 77 E--CYRCGQHGHIARACPDAGSSSRGGFGGARGGRSCYNCGGVGHLSRDCTSPAGAGAGA 134
Query: 240 --------CFNCGKPGHFARECTK 255
C+NC + GH +REC K
Sbjct: 135 GAGAGGQRCYNCNESGHISRECPK 158
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 62/119 (52%), Gaps = 24/119 (20%)
Query: 160 CYNCGDPEHFARDCPR----------QQGGSNS---YNNNSGGCFKCGGYGHLARDCIT- 205
C+NCG P H A CP QQG +S C+KC GH++RDC T
Sbjct: 7 CFNCGQPGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRDCPTN 66
Query: 206 -RGSGGGGGGRCYNCGKSGHLARDC---------GAGGAGGGGSCFNCGKPGHFARECT 254
+ GG GG CY CG+ GH+AR C G GGA GG SC+NCG GH +R+CT
Sbjct: 67 PAPAAGGPGGECYRCGQHGHIARACPDAGSSSRGGFGGARGGRSCYNCGGVGHLSRDCT 125
>gi|291409840|ref|XP_002721202.1| PREDICTED: cellular nucleic acid binding protein-like isoform 1
[Oryctolagus cuniculus]
Length = 168
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 36/145 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG----------------CYNCGDPEHFARDC 173
+CY C GH+A++C + YN GG CYNCG P H ARDC
Sbjct: 43 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 102
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ + C+ CG +GH+ +DC +CY CG++GH+A +C
Sbjct: 103 D---------HADEQKCYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTS 145
Query: 234 AGGGGSCFNCGKPGHFARECTKVAN 258
+C+ CG+ GH ARECT A
Sbjct: 146 E---VNCYRCGESGHLARECTIEAT 167
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 156 NSGGCYNCGDPEHFARDCP--------RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
+S C+ CG H+AR+CP + G + ++ C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 DEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 102
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSN---------YNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C GH AREC + + ++ CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE---- 61
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ CG GH+A+DC + CYNCGK GHLARDC C+
Sbjct: 62 -----DEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---QKCY 111
Query: 242 NCGKPGHFARECTKV 256
+CG+ GH ++CTKV
Sbjct: 112 SCGEFGHIQKDCTKV 126
>gi|410899915|ref|XP_003963442.1| PREDICTED: cellular nucleic acid-binding protein-like [Takifugu
rubripes]
Length = 167
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++R+C +R + CYNCG H ARDC + N C
Sbjct: 64 CYNCHKSGHISRDCKEPKREREH-----LCYNCGKAGHVARDCE---------HANEQKC 109
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CG +GH+ + C +CY CG+ GH+A C +C+NCGK GH A
Sbjct: 110 YSCGEFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASET---NCYNCGKAGHVA 158
Query: 251 RECTKVAN 258
R+CT A+
Sbjct: 159 RDCTIEAS 166
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + + C+ C GH++RDC + CYNC
Sbjct: 44 CYRCGEHGHIARDCDQPEDS----------CYNCHKSGHISRDC--KEPKREREHLCYNC 91
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+ARDC C++CG+ GH + C KV
Sbjct: 92 GKAGHVARDCEHANE---QKCYSCGEFGHIQKLCDKV 125
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 19/90 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG----------CYNCGDPEHFARDCPRQQGG 179
+CYNC GHVAR+C Y+ G CY CG+ H A C +
Sbjct: 87 LCYNCGKAGHVARDCEHANEQKCYSCGEFGHIQKLCDKVKCYRCGEIGHVAVQCSKA--- 143
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSG 209
+ C+ CG GH+ARDC S
Sbjct: 144 ------SETNCYNCGKAGHVARDCTIEASA 167
>gi|67904212|ref|XP_682362.1| hypothetical protein AN9093.2 [Aspergillus nidulans FGSC A4]
gi|40742736|gb|EAA61926.1| hypothetical protein AN9093.2 [Aspergillus nidulans FGSC A4]
Length = 213
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 32/141 (22%)
Query: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS-------------- 180
+ +GHV +C + R N +G CYNC P H AR+CP G+
Sbjct: 36 ESLGHVQADCPTLR----LNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGG 91
Query: 181 ----NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG- 235
+ C+KCGG H ARDC + +CY CGK GH++RDC A G
Sbjct: 92 FRGGYGGYPRAATCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCTAPNGGP 145
Query: 236 ---GGGSCFNCGKPGHFAREC 253
G C+ C + GH +R+C
Sbjct: 146 LSSAGKVCYKCSQAGHISRDC 166
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
CY CG+ H+A P + S + GH+ DC T G GRCYN
Sbjct: 7 ACYKCGNIGHYAGKQPGHESSSCPRPRTTES------LGHVQADCPTL-RLNGANGRCYN 59
Query: 219 CGKSGHLARDCGAGGAGG------------------------GGSCFNCGKPGHFARECT 254
C + GHLAR+C A +G +C+ CG P HFAR+C
Sbjct: 60 CSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARDCQ 119
Query: 255 KVA 257
A
Sbjct: 120 AQA 122
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 54/150 (36%), Gaps = 42/150 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPE---HFARDCPRQQGGSNSYNNN 186
CY C +GH A + S C E H DCP + N
Sbjct: 7 ACYKCGNIGHYA--------GKQPGHESSSCPRPRTTESLGHVQADCPTLR-----LNGA 53
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGG----------------------GRCYNCGKSGH 224
+G C+ C GHLAR+C SG G CY CG H
Sbjct: 54 NGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNH 113
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECT 254
ARDC A C+ CGK GH +R+CT
Sbjct: 114 FARDCQAQAM----KCYACGKLGHISRDCT 139
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S
Sbjct: 100 PRAATCYKCGGPNHFARDCQA---------QAMKCYACGKLGHISRDCTAPNGGPLSSAG 150
Query: 186 NSGGCFKCGGYGHLARDC 203
C+KC GH++RDC
Sbjct: 151 KV--CYKCSQAGHISRDC 166
>gi|378734858|gb|EHY61317.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 182
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 77/151 (50%), Gaps = 29/151 (19%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN- 185
G CYNC GHV+RECT+ + + CY CG+ H ARDC G
Sbjct: 22 GTPTCYNCGAEGHVSRECTAAPKPKS-------CYKCGNEGHLARDCQAAPAGGAGGGWG 74
Query: 186 ----------NSGGCFKCGGYGHLARDCITRGSGGGGGG--------RCYNCGKSGHLAR 227
++ C++CGG GH+ARDC + G GG GGG CY+CG GH++R
Sbjct: 75 NVGGNAYGGGSARECYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQTCYSCGGVGHMSR 134
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
DC G A C+NCG+ GH +R+C A+
Sbjct: 135 DCTQGRA---QKCYNCGEQGHLSRDCPSEAS 162
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 65/136 (47%), Gaps = 40/136 (29%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGG--------------CFKCGGYGHLARDCI 204
GCYNCGD H ARDCP++ G YN + G C+KCG GHLARDC
Sbjct: 4 GCYNCGDSSHQARDCPKK-GTPTCYNCGAEGHVSRECTAAPKPKSCYKCGNEGHLARDCQ 62
Query: 205 TRGS---------------GGGGGGRCYNCGKSGHLARDC----------GAGGAGGGGS 239
+ GGG CY CG GH+ARDC G GGG +
Sbjct: 63 AAPAGGAGGGWGNVGGNAYGGGSARECYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQT 122
Query: 240 CFNCGKPGHFARECTK 255
C++CG GH +R+CT+
Sbjct: 123 CYSCGGVGHMSRDCTQ 138
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C GVGH++R+CT R CYNCG+ H +RDCP S ++
Sbjct: 122 TCYSCGGVGHMSRDCTQGRAQK--------CYNCGEQGHLSRDCP-------SEASSERI 166
Query: 190 CFKCGGYGHLARDC 203
C+KC GHL C
Sbjct: 167 CYKCKQPGHLQSAC 180
>gi|237841239|ref|XP_002369917.1| glycine-rich protein 2, putative [Toxoplasma gondii ME49]
gi|211967581|gb|EEB02777.1| glycine-rich protein 2, putative [Toxoplasma gondii ME49]
Length = 209
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 1 MAQLTRSTGKVT---------WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQ 51
++QL R K+ WFD KG+GFI +DG DLFVHQ IK+ G+R L E +
Sbjct: 73 LSQLFRPRRKMEDQIQRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGE 131
Query: 52 SVEFDVQLEADGKYQALDVTAPGG 75
SVEF VQ+ DGK +A+ VT P G
Sbjct: 132 SVEFRVQVGHDGKRKAVSVTGPNG 155
>gi|125526345|gb|EAY74459.1| hypothetical protein OsI_02348 [Oryza sativa Indica Group]
Length = 98
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V FD G+ FI PDDG DLF+HQ S+K DGYR+L ++ +E V DG+
Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSGDDGRT 64
Query: 66 QALDVTAPG 74
+A+DVTAPG
Sbjct: 65 KAVDVTAPG 73
>gi|221504402|gb|EEE30077.1| glycine-rich protein, putative [Toxoplasma gondii VEG]
Length = 209
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 1 MAQLTRSTGKVT---------WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQ 51
++QL R K+ WFD KG+GFI +DG DLFVHQ IK+ G+R L E +
Sbjct: 73 LSQLFRPRRKMEDQIQRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGE 131
Query: 52 SVEFDVQLEADGKYQALDVTAPGG 75
SVEF VQ+ DGK +A+ VT P G
Sbjct: 132 SVEFRVQVGHDGKRKAVSVTGPNG 155
>gi|226495947|ref|NP_001141714.1| uncharacterized protein LOC100273843 [Zea mays]
gi|194705650|gb|ACF86909.1| unknown [Zea mays]
Length = 303
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 69/125 (55%), Gaps = 29/125 (23%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------CFKCGGYGHLARDCIT 205
G CY CG+P H ARDCP GG GG CFKCG GH+ARDC +
Sbjct: 177 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSS 236
Query: 206 RGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG------------SCFNCGKPGH 248
G G GGGG CYNCG++GH+ARDC +GG GGG SC+NCG+ GH
Sbjct: 237 GGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGSGGGRFGGGGGGGGDRSCYNCGEAGH 296
Query: 249 FAREC 253
AR+C
Sbjct: 297 IARDC 301
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 18/59 (30%)
Query: 214 GRCYNCGKSGHLARDCGAG------------------GAGGGGSCFNCGKPGHFARECT 254
G CY CG+ GH+ARDC + G GGGG CF CG+PGH AR+C+
Sbjct: 177 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCS 235
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG-------GCYNCGDPEHFARDCP 174
CYNC GH+AR+C S + G CYNCG+ H ARDCP
Sbjct: 252 CYNCGQAGHMARDCPSGGGSGGGRFGGGGGGGGDRSCYNCGEAGHIARDCP 302
>gi|443706057|gb|ELU02318.1| hypothetical protein CAPTEDRAFT_56774, partial [Capitella teleta]
Length = 110
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNS--GGCFKCGGYGHLARDCITR---GSGGGGGG 214
CYNC +P HF+R+CP+++ S ++ CF C GH ARDC S
Sbjct: 1 CYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDCHKARRVRSRSPSPA 60
Query: 215 RCYNCGKSGHLARDCGA--------GGAGGGGSCFNCGKPGHFARECTKV 256
CYNC + GH +R+C + CFNC +PGH+AR+C K
Sbjct: 61 VCYNCNEPGHFSRECPKEKRPCRPRADSPERPQCFNCHEPGHYARDCHKA 110
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 115 DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
+ R + P C+NC GH AR+C RR + + + CYNC +P HF+R+CP
Sbjct: 17 EKRPSRPRADSPERPQCFNCHEPGHYARDCHKARRVRSRSPSPAVCYNCNEPGHFSRECP 76
Query: 175 RQQGGSNSYNNNS--GGCFKCGGYGHLARDC 203
+++ ++ CF C GH ARDC
Sbjct: 77 KEKRPCRPRADSPERPQCFNCHEPGHYARDC 107
>gi|374082030|gb|AEY81219.1| LIN28B variant [Ovis aries]
Length = 267
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 2 AQLTRSTGKVTWFDGAKGYGFIR-------PDDGGADLFVHQKSIKSDGYRTLYENQSVE 54
+Q+ TG WF+ G+GFI P D D+FVHQ + +G+R+L E + VE
Sbjct: 31 SQVLHGTGHCKWFNVRMGFGFISMISREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVE 90
Query: 55 FDVQLEADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNN 114
F + + G +++ VT PGG+P S+ +G
Sbjct: 91 FTFKESSKG-LESIRVTGPGGSPCLGSERRPKGKTLQKRKPKG----------------- 132
Query: 115 DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
DS + GG + CYNC G+ H A+EC+ C+ C H +CP
Sbjct: 133 DSISSYGGLLATSSLRCYNCGGLDHHAKECS-------LPPQPKKCHCCQSITHMVANCP 185
>gi|318087050|gb|ADV40117.1| putative E3 ubiquitin ligase [Latrodectus hesperus]
Length = 175
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 25/131 (19%)
Query: 130 VCYNCDGVGHVARECT------SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
CY+C GH++R+CT S+R+ + CY CG P H +RDCP ++
Sbjct: 61 TCYSCGKSGHISRDCTQGGGGGSDRKMT--------CYTCGKPGHASRDCPNER------ 106
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFN 242
+ C+ CG GH++RDC G+ G CY C +SGH+AR+C + C++
Sbjct: 107 --DDRKCYSCGDTGHISRDCPEGGNAGDNDDTVCYRCNESGHIARNCR--NSRPSNKCYS 162
Query: 243 CGKPGHFAREC 253
CG+ GH AREC
Sbjct: 163 CGEVGHIAREC 173
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 58/107 (54%), Gaps = 15/107 (14%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSY------NNNSGGCFKCGGYGHLARDCITRGSG 209
+S CY C HFARDCP GG +++ C+ CG GH AR+C
Sbjct: 2 SSNECYKCHKSGHFARDCPSGDGGRGGGYRGDSRSSSRASCYNCGRSGHFARECRE---- 57
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGG---SCFNCGKPGHFAREC 253
CY+CGKSGH++RDC GG GG +C+ CGKPGH +R+C
Sbjct: 58 --SDKTCYSCGKSGHISRDCTQGGGGGSDRKMTCYTCGKPGHASRDC 102
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 19/126 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH AREC + + CY+CG H +RDC + GG + + C
Sbjct: 42 CYNCGRSGHFARECRESDKT---------CYSCGKSGHISRDCTQGGGGGS---DRKMTC 89
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS---CFNCGKPG 247
+ CG GH +RDC +CY+CG +GH++RDC GG G C+ C + G
Sbjct: 90 YTCGKPGHASRDCPNERDDR----KCYSCGDTGHISRDCPEGGNAGDNDDTVCYRCNESG 145
Query: 248 HFAREC 253
H AR C
Sbjct: 146 HIARNC 151
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNY-------NNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
CY C GH AR+C S +++ CYNCG HFAR+C
Sbjct: 6 CYKCHKSGHFARDCPSGDGGRGGGYRGDSRSSSRASCYNCGRSGHFAREC---------- 55
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDCGAGGAGGGGSCF 241
+ C+ CG GH++RDC T+G GGG + CY CGK GH +RDC C+
Sbjct: 56 RESDKTCYSCGKSGHISRDC-TQGGGGGSDRKMTCYTCGKPGHASRDCP--NERDDRKCY 112
Query: 242 NCGKPGHFARECTK 255
+CG GH +R+C +
Sbjct: 113 SCGDTGHISRDCPE 126
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 16/112 (14%)
Query: 121 GGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GGG + CY C GH +R+C + R + CY+CGD H +RDCP G
Sbjct: 79 GGGGSDRKMTCYTCGKPGHASRDCPNERDDRK-------CYSCGDTGHISRDCPE---GG 128
Query: 181 NSYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGRCYNCGKSGHLARDCGA 231
N+ +N+ C++C GH+AR+C +R S +CY+CG+ GH+AR+C A
Sbjct: 129 NAGDNDDTVCYRCNESGHIARNCRNSRPSN-----KCYSCGEVGHIARECEA 175
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 186 NSGGCFKCGGYGHLARDC----------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+S C+KC GH ARDC S CYNCG+SGH AR+C
Sbjct: 2 SSNECYKCHKSGHFARDCPSGDGGRGGGYRGDSRSSSRASCYNCGRSGHFARECRESDK- 60
Query: 236 GGGSCFNCGKPGHFARECTK 255
+C++CGK GH +R+CT+
Sbjct: 61 ---TCYSCGKSGHISRDCTQ 77
>gi|307198051|gb|EFN79104.1| Cellular nucleic acid-binding protein [Harpegnathos saltator]
Length = 154
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG----------CYNCGDPEHFARDCPRQQGG 179
CY C+ +GH AREC + C+ C HFAR+C Q
Sbjct: 5 ACYKCNRMGHFARECPQGGGGGGRGDRGRDRDGFGRGREKCFKCNQFGHFARECKEDQ-- 62
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG-- 237
C++C G GH+A+DC G CYNC K+GH+AR C GG G
Sbjct: 63 --------DLCYRCNGVGHIAKDC-----QQGPELSCYNCNKTGHMARSCPEGGNDSGRF 109
Query: 238 --GSCFNCGKPGHFARECTKV 256
SC+NC K GH AR CT+
Sbjct: 110 AMQSCYNCNKTGHIARNCTEA 130
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 29/130 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AREC ++ CY C H A+DC QQG S C
Sbjct: 45 CFKCNQFGHFARECKEDQ---------DLCYRCNGVGHIAKDC--QQGPELS-------C 86
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-----CYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
+ C GH+AR C GG GR CYNC K+GH+AR+C GG +C+ CGK
Sbjct: 87 YNCNKTGHMARSC---PEGGNDSGRFAMQSCYNCNKTGHIARNC---TEAGGKTCYICGK 140
Query: 246 PGHFARECTK 255
GH +REC +
Sbjct: 141 TGHISRECDQ 150
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C+GVGH+A++C S CYNC H AR CP +GG++S
Sbjct: 64 LCYRCNGVGHIAKDCQQGPELS--------CYNCNKTGHMARSCP--EGGNDSGRFAMQS 113
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ C GH+AR+C GG CY CGK+GH++R+C
Sbjct: 114 CYNCNKTGHIARNCTE-----AGGKTCYICGKTGHISREC 148
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 30/100 (30%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGG-------------RCYNCGKSGHLARDC--- 229
+S C+KC GH AR+C G GGG G +C+ C + GH AR+C
Sbjct: 2 SSSACYKCNRMGHFARECPQGGGGGGRGDRGRDRDGFGRGREKCFKCNQFGHFARECKED 61
Query: 230 --------GAG------GAGGGGSCFNCGKPGHFARECTK 255
G G G SC+NC K GH AR C +
Sbjct: 62 QDLCYRCNGVGHIAKDCQQGPELSCYNCNKTGHMARSCPE 101
>gi|307183595|gb|EFN70327.1| Cellular nucleic acid-binding protein [Camponotus floridanus]
Length = 154
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG----------CYNCGDPEHFARDCPRQQGG 179
CY C+ +GH AREC + C+ C HFAR+C Q
Sbjct: 5 ACYKCNRMGHFARECPQGGGGGRGDRGRDRDGGFGRGREKCFKCNQFGHFARECKEDQ-- 62
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG-- 237
C++C G GH+A+DC G CYNC K+GH+AR C GG G
Sbjct: 63 --------DLCYRCNGVGHIAKDC-----QQGPELSCYNCNKTGHMARSCPEGGNDSGRF 109
Query: 238 --GSCFNCGKPGHFARECTKV 256
SC+NC K GH AR CT+
Sbjct: 110 AMQSCYNCNKTGHIARNCTEA 130
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 29/130 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AREC ++ CY C H A+DC QQG S C
Sbjct: 45 CFKCNQFGHFARECKEDQ---------DLCYRCNGVGHIAKDC--QQGPELS-------C 86
Query: 191 FKCGGYGHLARDCITRGSGGGGGGR-----CYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
+ C GH+AR C GG GR CYNC K+GH+AR+C GG +C+ CGK
Sbjct: 87 YNCNKTGHMARSC---PEGGNDSGRFAMQSCYNCNKTGHIARNC---TEAGGKTCYICGK 140
Query: 246 PGHFARECTK 255
GH +REC +
Sbjct: 141 TGHISRECDQ 150
>gi|343960683|dbj|BAK61931.1| cellular nucleic acid-binding protein [Pan troglodytes]
Length = 170
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G CYNC GH+A++C +R CYNCG P H ARDC + +
Sbjct: 64 GDACYNCGRGGHIAKDCKEPKR-----EREQCCYNCGKPGHLARDCD---------HADE 109
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG +GH+ +DC +CY CG++GH+A +C +C CG+ G
Sbjct: 110 QKCYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSE---VNCSRCGESG 158
Query: 248 HFARECTKVAN 258
H ARECT A
Sbjct: 159 HLARECTIEAT 169
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 17/109 (15%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
+S C+ CG H+AR+CP G + G C++CG GHLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+G CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 LQGDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQ-- 63
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 64 --------GDACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
>gi|85001185|ref|XP_955311.1| cold shock protein [Theileria annulata strain Ankara]
gi|65303457|emb|CAI75835.1| cold shock protein, putative [Theileria annulata]
Length = 95
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 7/95 (7%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TR G WF+ KGYGFI ++G D+FVHQ I +DG+R+L+EN+ VE +V ++ +
Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNR 59
Query: 64 KYQALDVTAPGGAPV-----HSSKNNNTNNNSGYN 93
K +A+ VT P G V H +N+N N GYN
Sbjct: 60 K-KAIHVTGPNGTHVTGTNSHYGRNDNDKFNDGYN 93
>gi|154305586|ref|XP_001553195.1| hypothetical protein BC1G_08562 [Botryotinia fuckeliana B05.10]
Length = 254
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 66/166 (39%), Gaps = 48/166 (28%)
Query: 130 VCYNCDGVGHVARECTSNRR----------------NSNYNNNSGGCYNCGDPEHFARDC 173
CY C VGH A C S R NS+ +G CYNCG P H AR C
Sbjct: 61 ACYKCGNVGHYAEVCASAERLCYNCKQPGKPSEAEHNSSGAGTTGRCYNCGMPGHLARAC 120
Query: 174 PRQQGGSNSYNN-----------------------NSGGCFKCGGYGHLARDCITRGSGG 210
P G C+KCGG H ARDC +
Sbjct: 121 PNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQAQAM-- 178
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAG---GGGSCFNCGKPGHFAREC 253
+CY CG++GH +R+C + G G +C+ CG GH AR+C
Sbjct: 179 ----KCYACGRTGHSSRECTSPNGGVNKAGKTCYTCGTEGHIARDC 220
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 49/147 (33%), Gaps = 73/147 (49%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------------------------C 160
CYNC GH+AR C N NN G C
Sbjct: 107 CYNCGMPGHLARAC------PNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATC 160
Query: 161 YNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--------------TR 206
Y CG P HFARDC Q + C+ CG GH +R+C T
Sbjct: 161 YKCGGPNHFARDCQAQ----------AMKCYACGRTGHSSRECTSPNGGVNKAGKTCYT- 209
Query: 207 GSGGGGGGRCYNCGKSGHLARDCGAGG 233
CG GH+ARDC + G
Sbjct: 210 ------------CGTEGHIARDCPSKG 224
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
+ CY C GH +RECTS N N CY CG H ARDCP +
Sbjct: 177 AMKCYACGRTGHSSRECTSP--NGGVNKAGKTCYTCGTEGHIARDCPSK 223
>gi|224102939|ref|XP_002312862.1| predicted protein [Populus trichocarpa]
gi|222849270|gb|EEE86817.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C + H A++CT + C+ C + H ARDCP + G+ + +S C
Sbjct: 219 CFVCGSLEHGAKQCTKVCEDITIQKLGQDCFICKESGHRARDCPEKYKGT---HQSSKIC 275
Query: 191 FKCGGYGHLARDCI-------------------------TRGSGGGGGGRCYNCGKSGHL 225
KCGG GH C+ T G G CY CG+ GH
Sbjct: 276 LKCGGSGHEMLSCMNDYSVDDLKEIQCYICKSFGHLCCFTSGDDGSRQVSCYRCGELGHT 335
Query: 226 ARDCG-----AGGAGGGGSCFNCGKPGHFARECTKVA 257
DCG A SC+ CG+ GHFARECT A
Sbjct: 336 GLDCGRLHEEASMIESPSSCYRCGEGGHFARECTSSA 372
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR---GSGGGGGGRC 216
CYNCG+ H A +CP ++ CF CG H A+ C + G C
Sbjct: 196 CYNCGEEGHMAVNCP-------TFTKKIKPCFVCGSLEHGAKQCTKVCEDITIQKLGQDC 248
Query: 217 YNCGKSGHLARDCGAGGAGGGGS---CFNCGKPGHFARECT 254
+ C +SGH ARDC G S C CG GH C
Sbjct: 249 FICKESGHRARDCPEKYKGTHQSSKICLKCGGSGHEMLSCM 289
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
G CYNCG+ GH+A +C CF CG H A++CTKV
Sbjct: 191 SGWSNCYNCGEEGHMAVNCPT-FTKKIKPCFVCGSLEHGAKQCTKV 235
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
V CY C +GH +C ++ + CY CG+ HFAR+C
Sbjct: 324 VSCYRCGELGHTGLDCGRLHEEASMIESPSSCYRCGEGGHFAREC 368
>gi|304434516|dbj|BAJ15435.1| VASA-like gene [Mytilus galloprovincialis]
Length = 745
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 160 CYNCGDPEHFARDCPR-QQGGSNSYNNNSGGCFKCGGYGHLARDC--ITRGSGGGGGGRC 216
C+ CG+ H +R+CP +QGG N N CFKC GH+AR+C +G GGG G C
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRN---CFKCNESGHMARECPNAEQGGGGGRSGNC 204
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+ C +SGH+ARDC G +CF C + GH AR+C K
Sbjct: 205 FKCQESGHMARDC-PNSDSKGNACFKCNEGGHMARDCPK 242
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH++REC S + N C+ C + H AR+CP + SG C
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRN-CFKCNESGHMARECPNAE--QGGGGGRSGNC 204
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
FKC GH+ARDC S G C+ C + GH+ARDC
Sbjct: 205 FKCQESGHMARDCPNSDSKGNA---CFKCNEGGHMARDC 240
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
C+ C GH+AR+C N ++ C+ C + H ARDCP+ +G S
Sbjct: 204 CFKCQESGHMARDC------PNSDSKGNACFKCNEGGHMARDCPKAEGLS 247
>gi|429462832|ref|YP_007184295.1| cold shock protein [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451811422|ref|YP_007447877.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338346|gb|AFZ82769.1| cold shock protein [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451776580|gb|AGF47579.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 82
Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEAD 62
Q +STG V WF+ AKG+GFI PDDGG ++F H SI+ DG+RTL E Q V +++
Sbjct: 11 QKVKSTGTVKWFNDAKGFGFITPDDGGEEIFAHFSSIQMDGFRTLKEGQKVSYELTQGPK 70
Query: 63 GKYQALDVTAP 73
GK QAL++T P
Sbjct: 71 GK-QALNITKP 80
>gi|254429153|ref|ZP_05042860.1| 'Cold-shock' DNA-binding domain, putative [Alcanivorax sp. DG881]
gi|196195322|gb|EDX90281.1| 'Cold-shock' DNA-binding domain, putative [Alcanivorax sp. DG881]
Length = 84
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG+V WF+ AKGYGF+RPD+GG DLFVH I+ DGY++L Q VE++VQ
Sbjct: 2 ATGRVKWFNNAKGYGFVRPDEGGEDLFVHYSYIQMDGYKSLKAGQPVEYEVQ 53
>gi|401399368|ref|XP_003880531.1| cold-shock protein, DNA-binding, related [Neospora caninum
Liverpool]
gi|325114942|emb|CBZ50498.1| cold-shock protein, DNA-binding, related [Neospora caninum
Liverpool]
Length = 125
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEAD 62
Q+ R G WFD KG+GFI +DG DLFVHQ IK+ G+R L E +SVEF VQ+ D
Sbjct: 4 QIQR--GHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHD 60
Query: 63 GKYQALDVTAPGGAPVHSSKNNNTNNNSGYN 93
GK +A+ VT P G V GY
Sbjct: 61 GKRKAVGVTGPNGGFVQGEPRRMDAGRGGYR 91
>gi|341897961|gb|EGT53896.1| hypothetical protein CAEBREN_03982 [Caenorhabditis brenneri]
Length = 147
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R C ++S CYNC + HF+RDCP+ G G C
Sbjct: 6 CYKCQQPGHISRNCPQREQDSGRRGGGSTCYNCQETGHFSRDCPKGGSGGQRSGGGGGSC 65
Query: 191 FKCGGYGHLARDCIT---------------RGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ CGG GH +RDC + GS GG +CYNCG+ GH++R+C G+
Sbjct: 66 YNCGGRGHFSRDCPSARDDGGSRGYGGGRGGGSRSFGGQKCYNCGRQGHISRECTESGSA 125
Query: 236 GGGSCFNCGKPGHFARECTK 255
C+NC GH +R+CT+
Sbjct: 126 EEKRCYNCQGTGHISRDCTQ 145
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPE 167
G+ N R + G G GG CYNC GH +R+C + GG
Sbjct: 13 GHISRNCPQREQDSGRRG-GGSTCYNCQETGHFSRDCPKGGSGGQRSGGGGGSCYNCGGR 71
Query: 168 -HFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCITRGSGGGGGGR 215
HF+RDCP + S G C+ CG GH++R+C SG R
Sbjct: 72 GHFSRDCPSARDDGGSRGYGGGRGGGSRSFGGQKCYNCGRQGHISRECTE--SGSAEEKR 129
Query: 216 CYNCGKSGHLARDC 229
CYNC +GH++RDC
Sbjct: 130 CYNCQGTGHISRDC 143
>gi|221483569|gb|EEE21881.1| glycine-rich protein, putative [Toxoplasma gondii GT1]
Length = 209
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 10/84 (11%)
Query: 1 MAQLTRSTGKVT---------WFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQ 51
+ QL R K+ WFD KG+GFI +DG DLFVHQ IK+ G+R L E +
Sbjct: 73 LPQLFRPRRKMEDQIQRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGE 131
Query: 52 SVEFDVQLEADGKYQALDVTAPGG 75
SVEF VQ+ DGK +A+ VT P G
Sbjct: 132 SVEFRVQVGHDGKRKAVSVTGPNG 155
>gi|403216232|emb|CCK70729.1| hypothetical protein KNAG_0F00600 [Kazachstania naganishii CBS
8797]
Length = 157
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 28/132 (21%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC-----PRQQGGSNSYNN 185
CYNC GHV EC+ R C+NC H ++DC PR Q
Sbjct: 49 CYNCGETGHVKSECSVQR-----------CFNCNQTGHISKDCTEPRKPRAQAA----GG 93
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
C+KCGG HLARDC + +CY+CG GH++RDC G G C+NC +
Sbjct: 94 RGMSCYKCGGPNHLARDCQQEDT------KCYSCGNFGHISRDCPDG--PGDKVCYNCNQ 145
Query: 246 PGHFARECTKVA 257
GH +R+C + A
Sbjct: 146 SGHISRDCPETA 157
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 31/141 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
C+ C +GH+A EC S++ CYNCG P H +C PR YN
Sbjct: 5 ACFVCGKIGHLAEECDSDKL----------CYNCGQPGHVQSECTLPRTVEHKQCYNCGE 54
Query: 188 GG----------CFKCGGYGHLARDCITR-----GSGGGGGGRCYNCGKSGHLARDCGAG 232
G CF C GH+++DC + GG G CY CG HLARDC
Sbjct: 55 TGHVKSECSVQRCFNCNQTGHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLARDCQQE 114
Query: 233 GAGGGGSCFNCGKPGHFAREC 253
C++CG GH +R+C
Sbjct: 115 DT----KCYSCGNFGHISRDC 131
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 156 NSGGCYNCGDPEHFARDCPR-------------QQGGSNSYNNNSGGCFKCGGYGHLARD 202
+S C+ CG H A +C Q + C+ CG GH+ +
Sbjct: 2 SSKACFVCGKIGHLAEECDSDKLCYNCGQPGHVQSECTLPRTVEHKQCYNCGETGHVKSE 61
Query: 203 CITRGSGGGGGGRCYNCGKSGHLARDCG------AGGAGG-GGSCFNCGKPGHFARECTK 255
C + RC+NC ++GH+++DC A AGG G SC+ CG P H AR+C +
Sbjct: 62 CSVQ--------RCFNCNQTGHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLARDCQQ 113
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 17/97 (17%)
Query: 107 GGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDP 166
G K + R+ G G+ CY C G H+AR+C CY+CG+
Sbjct: 74 GHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLARDC---------QQEDTKCYSCGNF 124
Query: 167 EHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
H +RDCP G YN N GH++RDC
Sbjct: 125 GHISRDCPDGPGDKVCYNCNQS--------GHISRDC 153
>gi|356575086|ref|XP_003555673.1| PREDICTED: glycine-rich protein 2-like [Glycine max]
Length = 98
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSD-GYRTLYENQSVEFDVQLEADGK 64
R G V WF+ KG+GFI P+DGG+DLFVH +I++D G+RTL E QSVEF V + G+
Sbjct: 8 RYKGTVKWFNEEKGFGFITPEDGGSDLFVHYSAIQTDGGFRTLSEGQSVEFLVTQDDSGR 67
Query: 65 YQALDVTAPGGAPVHSSKNNNTNNNSG 91
A++VT V SS + N N+ G
Sbjct: 68 AAAVNVTT---TTVKSSDSGNGENSGG 91
>gi|85099515|ref|XP_960800.1| hypothetical protein NCU08933 [Neurospora crassa OR74A]
gi|28922325|gb|EAA31564.1| predicted protein [Neurospora crassa OR74A]
gi|28950135|emb|CAD70993.1| conserved hypothetical protein [Neurospora crassa]
Length = 449
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
+ C+NC+ VGH R+C R + C NCG H A DC PR G
Sbjct: 264 IKCFNCEEVGHRIRDCPIPRV------DKFACKNCGQSGHRASDCTEPRSAEGVE----- 312
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C KC GH ++DC GGG C NCG+ GH+A++C C NC +
Sbjct: 313 ---CRKCNEMGHFSKDC----PQGGGPRGCRNCGQEGHMAKECTEPKNMDNVQCRNCDEF 365
Query: 247 GHFARECTK 255
GHF++EC K
Sbjct: 366 GHFSKECPK 374
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 112 GNNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFA 170
N R + G G+ C NC +GH+ + C + C+NC + H
Sbjct: 219 AENLERLQDAGEVVSRGIPKCGNCGELGHIRKSCPEE--GAEKEELVIKCFNCEEVGHRI 276
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
RDCP + + C CG GH A DC S G C C + GH ++DC
Sbjct: 277 RDCPIPRV-------DKFACKNCGQSGHRASDCTEPRSAEGV--ECRKCNEMGHFSKDCP 327
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKVAN 258
GG G C NCG+ GH A+ECT+ N
Sbjct: 328 QGGGPRG--CRNCGQEGHMAKECTEPKN 353
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGH 224
P A + R Q + C CG GH+ + C G+ +C+NC + GH
Sbjct: 215 PADVAENLERLQDAGEVVSRGIPKCGNCGELGHIRKSCPEEGAEKEELVIKCFNCEEVGH 274
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
RDC +C NCG+ GH A +CT+
Sbjct: 275 RIRDCPIPRV-DKFACKNCGQSGHRASDCTE 304
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 17/82 (20%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
+ +G C+ C + H+AR+CP N + C +C H+ +DC R
Sbjct: 45 HQEPNGACHRCNEEGHYARECP---------NAPAMTCRECDSPDHVVKDCPERS----- 90
Query: 213 GGRCYNCGKSGHLARDCGAGGA 234
C NCG+ GH C A A
Sbjct: 91 ---CKNCGEKGHTIAKCEAARA 109
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 25/107 (23%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ +GH +++C GC NCG H A++C + N ++
Sbjct: 310 GVECRKCNEMGHFSKDCPQ-------GGGPRGCRNCGQEGHMAKEC------TEPKNMDN 356
Query: 188 GGCFKCGGYGHLARDC-----ITRGSGGGGGGRCYNCGKSGHLARDC 229
C C +GH +++C ITR +C NC + GH C
Sbjct: 357 VQCRNCDEFGHFSKECPKPRDITR-------VKCSNCQQMGHYKSKC 396
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 22/119 (18%)
Query: 87 NNNSGYNNNRGGRGGGGAGFGGYWKGN--NDSRRNNGGGYGPGGVVCYNCDGVGHVAREC 144
N++ + G GF + GN +D +G G+ C+ C+ GH AREC
Sbjct: 6 TNDAAWGAGEGTAFADSNGFDDHGSGNPVDDFAAADGAGHQEPNGACHRCNEEGHYAREC 65
Query: 145 TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
N + C C P+H +DCP + C CG GH C
Sbjct: 66 P--------NAPAMTCRECDSPDHVVKDCPER------------SCKNCGEKGHTIAKC 104
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP G C NC GH+A+ECT + N C NC + HF+++CP+ + +
Sbjct: 331 GPRG--CRNCGQEGHMAKECTEPKNMDNVQ-----CRNCDEFGHFSKECPKPRDITRV-- 381
Query: 185 NNSGGCFKCGGYGHLARDC 203
C C GH C
Sbjct: 382 ----KCSNCQQMGHYKSKC 396
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 11/71 (15%)
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+ +G C +C GH AR+C C C H+ +DC SC N
Sbjct: 45 HQEPNGACHRCNEEGHYAREC-----PNAPAMTCRECDSPDHVVKDCPER------SCKN 93
Query: 243 CGKPGHFAREC 253
CG+ GH +C
Sbjct: 94 CGEKGHTIAKC 104
>gi|336268999|ref|XP_003349261.1| hypothetical protein SMAC_05545 [Sordaria macrospora k-hell]
gi|380089834|emb|CCC12367.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 436
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ C+NCD VGH R+C R + C NCG H DC + N
Sbjct: 259 IKCFNCDEVGHRIRDCPIPRV------DKFACKNCGQNGHKVADCTEPRSAENVE----- 307
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH ++DC G G C NCG+ GH++++C C NC + GH
Sbjct: 308 -CRKCNETGHFSKDCPKTGPRG-----CRNCGQEGHMSKECTEPKNMDNVQCRNCDEMGH 361
Query: 249 FARECTK 255
F++EC K
Sbjct: 362 FSKECPK 368
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 112 GNNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFA 170
N R + G G+ C NC +GH+ + C C+NC + H
Sbjct: 214 AENLERLQDAGEVVAHGIPKCGNCGELGHIRKSCPEEPEQKE--EVVIKCFNCDEVGHRI 271
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
RDCP + + C CG GH DC S C C ++GH ++DC
Sbjct: 272 RDCPIPRV-------DKFACKNCGQNGHKVADCTEPRSAENV--ECRKCNETGHFSKDCP 322
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKVAN 258
G G C NCG+ GH ++ECT+ N
Sbjct: 323 KTGPRG---CRNCGQEGHMSKECTEPKN 347
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG-RCYNCGKSGH 224
P A + R Q + C CG GH+ + C +C+NC + GH
Sbjct: 210 PADVAENLERLQDAGEVVAHGIPKCGNCGELGHIRKSCPEEPEQKEEVVIKCFNCDEVGH 269
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
RDC +C NCG+ GH +CT+
Sbjct: 270 RIRDCPIPRV-DKFACKNCGQNGHKVADCTE 299
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 151 SNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG 210
++ +G C C + H+AR+CP N + C +CG H+ ++C
Sbjct: 38 ADQQEPNGACRRCNEEGHWARECP---------NAPAMTCRECGSPDHVVKEC------- 81
Query: 211 GGGGRCYNCGKSGHLARDCGAGGA 234
C NCG+ GH +C A A
Sbjct: 82 -PEVLCKNCGEKGHRISECEAARA 104
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
G C +C GH AR+C C CG H+ ++C C NCG+ G
Sbjct: 45 GACRRCNEEGHWAREC-----PNAPAMTCRECGSPDHVVKECPEV------LCKNCGEKG 93
Query: 248 HFAREC 253
H EC
Sbjct: 94 HRISEC 99
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
G C C + GH AR+C A +C CG P H +EC +V
Sbjct: 45 GACRRCNEEGHWARECPNAPAM---TCRECGSPDHVVKECPEV 84
>gi|268554107|ref|XP_002635041.1| Hypothetical protein CBG13587 [Caenorhabditis briggsae]
Length = 148
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH++R C ++S CYNC + HF+RDCP+ G C
Sbjct: 6 CYKCQQPGHISRNCPQRDQDSGRRGGGSVCYNCQETGHFSRDCPKGGSQRGGGGGGGGSC 65
Query: 191 FKCGGYGHLARDCIT---------------RGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ CGG GH +RDC + G GG GG +CYNCG++GH++R+C G+
Sbjct: 66 YNCGGRGHFSRDCPSARDDGGSRSYGGGRGGGRGGYGGQKCYNCGRNGHISRECTESGSA 125
Query: 236 GGGSCFNCGKPGHFARECTKVAN 258
C+NC + GH +REC N
Sbjct: 126 EEKRCYNCQETGHISRECPTQNN 148
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 50/117 (42%)
Query: 189 GCFKCGGYGHLARDCITRGSGGG---GGGRCYNCGKSGHLARDCGAGGAGGGG------- 238
C+KC GH++R+C R G GG CYNC ++GH +RDC GG+ GG
Sbjct: 5 SCYKCQQPGHISRNCPQRDQDSGRRGGGSVCYNCQETGHFSRDCPKGGSQRGGGGGGGGS 64
Query: 239 ----------------------------------------SCFNCGKPGHFARECTK 255
C+NCG+ GH +RECT+
Sbjct: 65 CYNCGGRGHFSRDCPSARDDGGSRSYGGGRGGGRGGYGGQKCYNCGRNGHISRECTE 121
>gi|425774261|gb|EKV12574.1| hypothetical protein PDIG_43280 [Penicillium digitatum PHI26]
gi|425778540|gb|EKV16664.1| hypothetical protein PDIP_34510 [Penicillium digitatum Pd1]
Length = 185
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 73/151 (48%), Gaps = 32/151 (21%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC+G GH++REC + + CY CG H +R+CP Q G N
Sbjct: 28 GNPTCYNCNGQGHLSRECQEPAKEKS-------CYRCGQTGHLSRECP-QGGDGNYSGGG 79
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR-------------------CYNCGKSGHLAR 227
S C+KCG GH+AR+C G+ GGG CY+CG GH+AR
Sbjct: 80 SQECYKCGQVGHIARNCSQGGNYGGGYSTGGYGGGFGGPGGAGGRQQTCYSCGGFGHMAR 139
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
DC G C+NCG+ GH +R+C A
Sbjct: 140 DCTQ-----GQKCYNCGEVGHVSRDCPTEAK 165
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 23/138 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C GH++REC + S CY CG H AR+C + Y+ G
Sbjct: 54 CYRCGQTGHLSRECPQGGDGNYSGGGSQECYKCGQVGHIARNCSQGGNYGGGYSTGGYGG 113
Query: 190 --------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
C+ CGG+GH+ARDC G +CYNCG+ GH++RDC A
Sbjct: 114 GFGGPGGAGGRQQTCYSCGGFGHMARDCTQ-------GQKCYNCGEVGHVSRDCPT-EAK 165
Query: 236 GGGSCFNCGKPGHFAREC 253
G C+ C +PGH C
Sbjct: 166 GERMCYKCKQPGHVQSAC 183
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
GGC+NCG+ H A+DCP+ +G YN C G GHL+R+C CY
Sbjct: 9 GGCFNCGEASHQAKDCPK-KGNPTCYN--------CNGQGHLSRECQEPAKEKS----CY 55
Query: 218 NCGKSGHLARDC-----GAGGAGGGGSCFNCGKPGHFARECTK 255
CG++GHL+R+C G GG C+ CG+ GH AR C++
Sbjct: 56 RCGQTGHLSRECPQGGDGNYSGGGSQECYKCGQVGHIARNCSQ 98
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 17/74 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH+AR+CT ++ CYNCG+ H +RDCP + G
Sbjct: 127 TCYSCGGFGHMARDCTQGQK----------CYNCGEVGHVSRDCPTEAKGERM------- 169
Query: 190 CFKCGGYGHLARDC 203
C+KC GH+ C
Sbjct: 170 CYKCKQPGHVQSAC 183
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G G C+NCG++ H A+DC G +C+NC GH +REC + A
Sbjct: 6 AGRGGCFNCGEASHQAKDC---PKKGNPTCYNCNGQGHLSRECQEPAK 50
>gi|410079168|ref|XP_003957165.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
gi|372463750|emb|CCF58030.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
Length = 159
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 24/140 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSN---YNNNSGG----------CYNCGDPEHFARDC--P 174
+CYNC+ GHV ECT R SN YN G CYNC + H +RDC P
Sbjct: 25 LCYNCNKPGHVQSECTEPRTVSNKQCYNCGETGHIQSECTVQRCYNCNEVGHISRDCDQP 84
Query: 175 RQQGGSNSYNNNS-GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
++ +N+ NS C+KCGG H+A+DC +CY CG+ GH+A+DC A
Sbjct: 85 KRFNNNNNKRFNSRLSCYKCGGPNHMAKDC------RSAEVKCYTCGRFGHVAKDCSAD- 137
Query: 234 AGGGGSCFNCGKPGHFAREC 253
C+ C + GH +R+C
Sbjct: 138 -PNEKVCYKCNEAGHISRDC 156
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 18/105 (17%)
Query: 131 CYNCDGVGHVAREC----TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
CYNC+ VGH++R+C N N+ N+ CY CG P H A+DC +
Sbjct: 68 CYNCNEVGHISRDCDQPKRFNNNNNKRFNSRLSCYKCGGPNHMAKDC----------RSA 117
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
C+ CG +GH+A+DC S CY C ++GH++RDC A
Sbjct: 118 EVKCYTCGRFGHVAKDC----SADPNEKVCYKCNEAGHISRDCPA 158
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GHLA DC CYNC K GH+ +C C+NCG+ GH
Sbjct: 6 ACYICGKLGHLAEDC-------DSEKLCYNCNKPGHVQSECTEPRTVSNKQCYNCGETGH 58
Query: 249 FARECT 254
ECT
Sbjct: 59 IQSECT 64
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CY CGK GHLA DC + C+NC KPGH ECT+
Sbjct: 7 CYICGKLGHLAEDCDSEKL-----CYNCNKPGHVQSECTE 41
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
V CY C GHVA++C+++ N CY C + H +RDCP Q
Sbjct: 117 AEVKCYTCGRFGHVAKDCSAD-------PNEKVCYKCNEAGHISRDCPAQ 159
>gi|408374997|ref|ZP_11172676.1| cold-shock domain-contain protein [Alcanivorax hongdengensis
A-11-3]
gi|407765165|gb|EKF73623.1| cold-shock domain-contain protein [Alcanivorax hongdengensis
A-11-3]
Length = 87
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG+V WF+ AKGYGF+RPD+GG DLFVH I+ DGY++L Q VE++VQ
Sbjct: 2 ATGRVKWFNNAKGYGFVRPDEGGEDLFVHYSYIQMDGYKSLKAGQPVEYEVQ 53
>gi|37220736|gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
Length = 244
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
VC NC GH+A ECT+ C+NC +P H A +C +N
Sbjct: 63 VCNNCGLPGHIAAECTA----------KTLCWNCKEPGHMANEC-----------SNEAV 101
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C C GHLARDC G C NC + GH+A DC +C NC KPGH
Sbjct: 102 CHNCNKTGHLARDCSASGLSSFDTRLCNNCHRPGHIAADC-----TNDKTCNNCRKPGHL 156
Query: 250 ARECT 254
ARECT
Sbjct: 157 ARECT 161
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 29/136 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
VC+NC+ GH+AR+C+++ +S ++ C NC P H A DC N
Sbjct: 101 VCHNCNKTGHLARDCSASGLSSF---DTRLCNNCHRPGHIAADC-----------TNDKT 146
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA--------GGAGGGGSCF 241
C C GHLAR+C C C SGH+AR C GG C
Sbjct: 147 CNNCRKPGHLARECT-------NDPVCNVCNVSGHVARQCPKSNLPSEIHGGPFRDIICR 199
Query: 242 NCGKPGHFARECTKVA 257
C +PGH +R+C +
Sbjct: 200 VCNQPGHISRDCVGIV 215
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 74/193 (38%), Gaps = 49/193 (25%)
Query: 57 VQLEADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGG---RGGGGAGFGGYWKGN 113
+ E K + PG N +N +N N+ G R +G +
Sbjct: 73 IAAECTAKTLCWNCKEPGHM-----ANECSNEAVCHNCNKTGHLARDCSASGLSSF---- 123
Query: 114 NDSRRNNGGGYGPGGV--------VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGD 165
D+R N + PG + C NC GH+ARECT N C C
Sbjct: 124 -DTRLCNNC-HRPGHIAADCTNDKTCNNCRKPGHLARECT----------NDPVCNVCNV 171
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFK------CGGYGHLARDCITRGSGGGGGGRCYNC 219
H AR CP+ SN + GG F+ C GH++RDC+ G C C
Sbjct: 172 SGHVARQCPK----SNLPSEIHGGPFRDIICRVCNQPGHISRDCV-------GIVICNTC 220
Query: 220 GKSGHLARDCGAG 232
G GH+A +C +G
Sbjct: 221 GGRGHMAYECPSG 233
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C C GH ARDC C NCG GH+A +C A C+NC +PGH
Sbjct: 45 CKNCKRPGHFARDC-------SHIAVCNNCGLPGHIAAECTAKTL-----CWNCKEPGHM 92
Query: 250 ARECTKVA 257
A EC+ A
Sbjct: 93 ANECSNEA 100
>gi|425773077|gb|EKV11450.1| Zinc knuckle nucleic acid binding protein, putative [Penicillium
digitatum Pd1]
gi|425778832|gb|EKV16937.1| Zinc knuckle nucleic acid binding protein, putative [Penicillium
digitatum PHI26]
Length = 249
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 62/162 (38%), Gaps = 49/162 (30%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A C+S R CYNC P H + CP + +
Sbjct: 7 ACYKCGTIGHYAEVCSSTERL---------CYNCKQPGHESSACPLPR------TTETKQ 51
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG----------- 238
C+ C G GH+ DC T GG GRCYNC + GHLAR C A G
Sbjct: 52 CYNCQGLGHVQADCPTLRLNGGANGRCYNCSQPGHLARSCTNPTAPRAGAPPTGPAAGRG 111
Query: 239 -----------------------SCFNCGKPGHFARECTKVA 257
+C+ CG P HFAR+C A
Sbjct: 112 SGGARGGFQGGFRGGFSGYPRAATCYKCGGPNHFARDCQAQA 153
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 67/180 (37%), Gaps = 65/180 (36%)
Query: 130 VCYNCD------------------------GVGHVARECTSNRRNSNYNNNSGGCYNCGD 165
+CYNC G+GHV +C + R N N G CYNC
Sbjct: 27 LCYNCKQPGHESSACPLPRTTETKQCYNCQGLGHVQADCPTLRLNGGAN---GRCYNCSQ 83
Query: 166 PEHFARDC-----PRQQGGSNSYNN-----------------------NSGGCFKCGGYG 197
P H AR C PR + C+KCGG
Sbjct: 84 PGHLARSCTNPTAPRAGAPPTGPAAGRGSGGARGGFQGGFRGGFSGYPRAATCYKCGGPN 143
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG----GGGSCFNCGKPGHFAREC 253
H ARDC + +CY CGK GH++RDC A G G C+ C + GH +R+C
Sbjct: 144 HFARDCQAQAM------KCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCAQAGHISRDC 197
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 62/153 (40%), Gaps = 45/153 (29%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECT---------------------- 145
G+ + + + R NGG G CYNC GH+AR CT
Sbjct: 59 GHVQADCPTLRLNGGANG----RCYNCSQPGHLARSCTNPTAPRAGAPPTGPAAGRGSGG 114
Query: 146 -------SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGH 198
R + + CY CG P HFARDC Q + C+ CG GH
Sbjct: 115 ARGGFQGGFRGGFSGYPRAATCYKCGGPNHFARDCQAQ----------AMKCYACGKLGH 164
Query: 199 LARDCITR--GSGGGGGGRCYNCGKSGHLARDC 229
++RDC G G CY C ++GH++RDC
Sbjct: 165 ISRDCTAPNGGPLSSAGKVCYKCAQAGHISRDC 197
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + + CY CG H +RDC GG S
Sbjct: 131 PRAATCYKCGGPNHFARDCQAQ---------AMKCYACGKLGHISRDCTAPNGGPLS--- 178
Query: 186 NSGG--CFKCGGYGHLARDCIT 205
S G C+KC GH++RDC T
Sbjct: 179 -SAGKVCYKCAQAGHISRDCPT 199
>gi|326502466|dbj|BAJ95296.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507234|dbj|BAJ95694.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 66/122 (54%), Gaps = 27/122 (22%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI---------TRGSGG 210
C+ CG+P H ARDC G + GGC+KCG GH+ARDC G GG
Sbjct: 144 CFKCGEPGHMARDC-SVNGAAGGGGGGGGGCYKCGEQGHIARDCFNGGAGGGGGGYGGGG 202
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGG-----------------SCFNCGKPGHFAREC 253
GGGG CYNCG+ GH+ARDC GGG SC+NCG+PGH +REC
Sbjct: 203 GGGGTCYNCGEPGHIARDCPTSSGFGGGGGGGRFGGGGGGGGGDRSCYNCGEPGHISREC 262
Query: 254 TK 255
TK
Sbjct: 263 TK 264
>gi|226246544|ref|NP_001139665.1| vasa protein [Strongylocentrotus purpuratus]
gi|223056284|gb|ACM80369.1| vasa [Strongylocentrotus purpuratus]
Length = 766
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR------GSGGGGG 213
CY C + H ARDCP C+ CG GH++R+C T+ GGGG
Sbjct: 146 CYKCQEEGHMARDCPNGDSSGGGRGGGDRSCYNCGETGHMSRECPTKDSSGGGRGGGGGD 205
Query: 214 GRCYNCGKSGHLARDCGAGGAG-----GGGSCFNCGKPGHFAREC 253
CYNCG++GH++R+C + GGG CF C + GHFA+EC
Sbjct: 206 RSCYNCGETGHMSRECPTKDSSGGGGGGGGKCFRCQEEGHFAKEC 250
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSNSYNNNS 187
CYNC GH++REC + + GG CYNCG+ H +R+CP + S
Sbjct: 176 CYNCGETGHMSRECPTKDSSGGGRGGGGGDRSCYNCGETGHMSRECP-TKDSSGGGGGGG 234
Query: 188 GGCFKCGGYGHLARDCI---TRGSGGGGGGR 215
G CF+C GH A++C TR G GG +
Sbjct: 235 GKCFRCQEEGHFAKECPNPDTRNEGEGGEAK 265
>gi|407917903|gb|EKG11203.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 176
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 31/146 (21%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P CYNC H AR+C + + CYNCG+ H +RDC + Q
Sbjct: 5 APPARGCYNCGDTSHQARDCPTK--------GNPTCYNCGEQGHLSRDCQQPQA------ 50
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGG------- 236
C++CG GHL+R+C G+ G G G+ CY CGK GH+AR+C + G G
Sbjct: 51 --EKPCYRCGKVGHLSRECPEGGAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYGGG 108
Query: 237 -------GGSCFNCGKPGHFARECTK 255
G +C++CG GH +R+CT+
Sbjct: 109 SGFGGPRGQTCYSCGGYGHMSRDCTQ 134
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 27/139 (19%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GH++R+C + CY CG H +R+CP +GG+
Sbjct: 28 GNPTCYNCGEQGHLSRDCQQPQAEKP-------CYRCGKVGHLSRECP--EGGAPGMGAG 78
Query: 187 SGGCFKCGGYGHLARDC------------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C+KCG GH+AR+C G GG G CY+CG GH++RDC
Sbjct: 79 QE-CYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQTCYSCGGYGHMSRDCTQ--- 134
Query: 235 GGGGSCFNCGKPGHFAREC 253
G C+NCG+ GH +R+C
Sbjct: 135 --GQKCYNCGEVGHLSRDC 151
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C VGH++REC + CY CG H AR+C GG G
Sbjct: 54 CYRCGKVGHLSRECPEG--GAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYGGGSGF 111
Query: 190 -------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
C+ CGGYGH++RDC G +CYNCG+ GHL+RDC + C+
Sbjct: 112 GGPRGQTCYSCGGYGHMSRDCTQ-------GQKCYNCGEVGHLSRDCPSE-TSNERVCYK 163
Query: 243 CGKPGHFAREC 253
C +PGH C
Sbjct: 164 CKQPGHVQAAC 174
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P G CY+C G GH++R+CT ++ CYNCG+ H +RDCP S +
Sbjct: 114 PRGQTCYSCGGYGHMSRDCTQGQK----------CYNCGEVGHLSRDCP-------SETS 156
Query: 186 NSGGCFKCGGYGHLARDC 203
N C+KC GH+ C
Sbjct: 157 NERVCYKCKQPGHVQAAC 174
>gi|149689038|gb|ABR27834.1| E3 ubiquitin ligase [Triatoma infestans]
Length = 136
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSG------GCYNCGDPEHFARDCPRQQGGSN 181
V CY C+ GH AREC + G CY C HFAR+C Q
Sbjct: 3 SVTCYRCNRSGHFARECPQGGDRGSGGGGGGGYRGREKCYKCNRFGHFARECKEDQDR-- 60
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-----AGGAGG 236
C++C GH+A+DC CYNC K+GH+AR+C + G
Sbjct: 61 --------CYRCNNVGHIAKDC----QQSTDEPSCYNCNKTGHIARECPEQRENSRGGYS 108
Query: 237 GGSCFNCGKPGHFARECTK 255
G C+ C KPGH AR+C +
Sbjct: 109 SGPCYTCNKPGHMARDCPE 127
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+ GH AREC ++ CY C + H A+DC QQ + C
Sbjct: 41 CYKCNRFGHFARECKEDQ---------DRCYRCNNVGHIAKDC--QQS------TDEPSC 83
Query: 191 FKCGGYGHLARDCITR---GSGGGGGGRCYNCGKSGHLARDCGAG 232
+ C GH+AR+C + GG G CY C K GH+ARDC G
Sbjct: 84 YNCNKTGHIARECPEQRENSRGGYSSGPCYTCNKPGHMARDCPEG 128
>gi|158296117|ref|XP_316618.3| AGAP006591-PA [Anopheles gambiae str. PEST]
gi|157016359|gb|EAA11383.3| AGAP006591-PA [Anopheles gambiae str. PEST]
Length = 182
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 43/166 (25%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G+ WF+ KG+GFI PDDGG ++FVHQ I+ G+R+L EN+ VEF+ +L A G Y+A
Sbjct: 44 GRCKWFNVVKGWGFITPDDGGQEVFVHQSVIQMGGFRSLGENEEVEFESKLSAKG-YEAT 102
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGG 128
V P A G+ F Y K +
Sbjct: 103 SVYGPSHAEC-----------------------KGSDFRPYSKKRRFRK----------- 128
Query: 129 VVCYNC-DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
V CYNC + H+A +C C+NC +H DC
Sbjct: 129 VRCYNCGEFANHIASKC-------ELGPLPKRCHNCRSEDHLIADC 167
>gi|403413797|emb|CCM00497.1| predicted protein [Fibroporia radiculosa]
Length = 178
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 70/143 (48%), Gaps = 29/143 (20%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC GHV++ECTS + + CY CG H +RDCP +N+
Sbjct: 24 GTPTCYNCGLEGHVSKECTSETK-------AKACYRCGQEGHISRDCP---DAANAPPGA 73
Query: 187 SGG-----CFKCGGYGHLARDCITRGSGGG---------GGGRCYNCGKSGHLARDCGAG 232
GG C++CG GH+AR C SGGG G CY CG GHL+RDC
Sbjct: 74 IGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTCYTCGGVGHLSRDCVQ- 132
Query: 233 GAGGGGSCFNCGKPGHFARECTK 255
G C+NC GH +R+C +
Sbjct: 133 ----GSKCYNCSGVGHISRDCPQ 151
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 33/142 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC G GH A C + CYNCG H +++C + + C
Sbjct: 7 CFNCGGFGHQAANCP--------KAGTPTCYNCGLEGHVSKEC--------TSETKAKAC 50
Query: 191 FKCGGYGHLARDCITRGS------GGGGGGRCYNCGKSGHLARDCGAGGAG--------- 235
++CG GH++RDC + GG CY CGK+GH+AR C +G
Sbjct: 51 YRCGQEGHISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGG 110
Query: 236 --GGGSCFNCGKPGHFARECTK 255
G +C+ CG GH +R+C +
Sbjct: 111 NFGSKTCYTCGGVGHLSRDCVQ 132
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
GC+NCG H A +CP+ + C+ CG GH++++C + CY
Sbjct: 6 GCFNCGGFGHQAANCPKA---------GTPTCYNCGLEGHVSKECTSETKAKA----CYR 52
Query: 219 CGKSGHLARDC-----GAGGAGGGGS---CFNCGKPGHFARECTKVAN 258
CG+ GH++RDC GA GG S C+ CGK GH AR C A+
Sbjct: 53 CGQEGHISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAAS 100
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
G CYNC GVGH++R+C +R + CY CG H +RDCP
Sbjct: 133 GSKCYNCSGVGHISRDCPQPQRRA--------CYTCGSEGHISRDCP 171
>gi|255710197|gb|ACU30918.1| E3 ubiquitin ligase methyltransferase [Ochlerotatus triseriatus]
Length = 136
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+ +GH AR+C + CY C H ARDC S + + C
Sbjct: 29 CYKCNQMGHFARDCKED---------LDRCYRCNGSGHIARDC--------SLSPDDSCC 71
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ C GHLAR+C + S CYNC KSGH++R+C G SC++CGK GH +
Sbjct: 72 YNCNQSGHLARNCPEK-SDRDMNVSCYNCNKSGHISRNCPTGDK----SCYSCGKIGHLS 126
Query: 251 RECTK 255
R+CT+
Sbjct: 127 RDCTE 131
>gi|340795411|ref|YP_004760874.1| cold shock-like protein A [Corynebacterium variabile DSM 44702]
gi|340535321|gb|AEK37801.1| cold shock-like protein A [Corynebacterium variabile DSM 44702]
Length = 100
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ G V WF+ KGYGFI P+DGGAD+FVH I+ +G+RTL ENQ VEF++ A G
Sbjct: 34 MAQGTVKWFNAEKGYGFIAPNDGGADVFVHYSEIQGNGFRTLEENQQVEFEIGEGAKGP- 92
Query: 66 QALDVTA 72
QA VTA
Sbjct: 93 QAQQVTA 99
>gi|242791199|ref|XP_002481710.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
gi|218718298|gb|EED17718.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
Length = 446
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 129 VVCYNCDGVGHVARECTSNRRN------------------SNYNNNSGGCYNCGDPEHFA 170
+ C NC VGH AR+CT R++ N ++ C C D HFA
Sbjct: 288 IKCVNCSEVGHRARDCTQPRKSKFGCRNCGASDHKAAECTEPPNMDNVECRRCNDTGHFA 347
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DCP S + + C KCG HL+RDC C NC ++GH RDC
Sbjct: 348 KDCP-------SASKVAKACRKCGAEDHLSRDC--DQPQNMDLITCNNCDETGHYGRDCP 398
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKVA 257
C NCG+ GH R C+K A
Sbjct: 399 KPRDWSRVKCTNCGEMGHTHRRCSKPA 425
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 101/266 (37%), Gaps = 38/266 (14%)
Query: 18 KGYGFIRPDDGGADLFVHQKSIK----SDGYRTLYENQSVEFDVQLEADGK---YQALDV 70
+ + I+ D DL ++++K +D +T V+ + QL A+G AL+
Sbjct: 144 QAWAMIKKADAERDLDDFREALKVYMKADPTKTF-----VDIEKQLRAEGAKIYLIALEK 198
Query: 71 TAPGGAPVHSS----KNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGP 126
G K + T + + RG + + N + + G Y
Sbjct: 199 QKEGSEAYTLIDLQGKLDCTYVVKLFFSPDPRRGTLKERWPTTPEENLERLADAGFEYDR 258
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQG------ 178
C NC +GH++R C R + C NC + H ARDC PR+
Sbjct: 259 MIPKCSNCGEMGHISRACKQER--VEFERVEIKCVNCSEVGHRARDCTQPRKSKFGCRNC 316
Query: 179 ---------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ N ++ C +C GH A+DC S C CG HL+RDC
Sbjct: 317 GASDHKAAECTEPPNMDNVECRRCNDTGHFAKDC---PSASKVAKACRKCGAEDHLSRDC 373
Query: 230 GAGGAGGGGSCFNCGKPGHFARECTK 255
+C NC + GH+ R+C K
Sbjct: 374 DQPQNMDLITCNNCDETGHYGRDCPK 399
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NCG HF RDCP + GGCF CG GH DC G C C
Sbjct: 45 CRNCGQSGHFVRDCPEPR------QGGGGGCFNCGEEGHNKADC---PHPRVFKGTCRIC 95
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+ GH A +C A C NC K GH EC +
Sbjct: 96 NEEGHPAMECPQKPA---EVCKNCRKEGHKIAECKE 128
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 182 SYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
Y+ C CG GH++R C R +C NC + GH ARDC G C
Sbjct: 255 EYDRMIPKCSNCGEMGHISRACKQERVEFERVEIKCVNCSEVGHRARDCTQPRKSKFG-C 313
Query: 241 FNCGKPGHFARECTKVAN 258
NCG H A ECT+ N
Sbjct: 314 RNCGASDHKAAECTEPPN 331
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 17/104 (16%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P C NC GH R+C R+ GGC+NCG+ H DCP +
Sbjct: 40 PRNDTCRNCGQSGHFVRDCPEPRQGG-----GGGCFNCGEEGHNKADCPHPRVF------ 88
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
G C C GH A +C + + C NC K GH +C
Sbjct: 89 -KGTCRICNEEGHPAMECPQKPAEV-----CKNCRKEGHKIAEC 126
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 207 GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+G C NCG+SGH RDC GGGG CFNCG+ GH +C
Sbjct: 36 SAGPPRNDTCRNCGQSGHFVRDCPEPRQGGGGGCFNCGEEGHNKADC 82
>gi|186474439|ref|YP_001863410.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phymatum STM815]
gi|184198398|gb|ACC76360.1| cold-shock DNA-binding domain protein [Burkholderia phymatum
STM815]
Length = 67
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDGG DLF H IK++G+++L ENQ V FDV++ GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIKTEGFKSLQENQKVSFDVKMGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|46137255|ref|XP_390319.1| hypothetical protein FG10143.1 [Gibberella zeae PH-1]
Length = 434
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CYNC GH R+C R + N C NCG H DC +N
Sbjct: 270 ISCYNCGADGHRVRDCPEPRVDKN------ACKNCGKSGHKVVDCEEPPNPANVE----- 318
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH A+DC GGG C NCG+ GH+A++C +C NC + GH
Sbjct: 319 -CRKCSEVGHFAKDCPQ-----GGGRACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGH 372
Query: 249 FAREC 253
+++EC
Sbjct: 373 YSKEC 377
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G +C NC +GH+++ CT + + CYNCG H RDCP + N+
Sbjct: 240 GLPLCSNCRELGHISKFCTQEKMERT-DGPKISCYNCGADGHRVRDCPEPRVDKNA---- 294
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C CG GH DC C C + GH A+DC GG G +C NCG+
Sbjct: 295 ---CKNCGKSGHKVVDC--EEPPNPANVECRKCSEVGHFAKDCPQGG---GRACRNCGQE 346
Query: 247 GHFARECTK 255
GH A+EC +
Sbjct: 347 GHMAKECDQ 355
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C C GH+++ C G + CYNCG GH RDC +C NCGK G
Sbjct: 244 CSNCRELGHISKFCTQEKMERTDGPKISCYNCGADGHRVRDCPEPRVDKN-ACKNCGKSG 302
Query: 248 HFARECTKVAN 258
H +C + N
Sbjct: 303 HKVVDCEEPPN 313
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CF CG GH +C C C K GH+ +DC C NCG+ GHF
Sbjct: 53 CFGCGEIGHRRAECPNPQEMA-----CRYCKKEGHMRKDCPEAPPM---VCENCGEEGHF 104
Query: 250 ARECTK 255
+ C K
Sbjct: 105 RKHCEK 110
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 12/110 (10%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C NC GH+A+EC R S C NC H++++CP + S
Sbjct: 336 GGRACRNCGQEGHMAKECDQPRDMSTVT-----CRNCEQQGHYSKECPLPRDWSKVQ--- 387
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
C C YGH C + R + SG +A G G GG
Sbjct: 388 ---CSNCQEYGHTKVRCKAPLAEESADDR-WGADDSGAVAVTVGDGDDGG 433
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 44/128 (34%), Gaps = 40/128 (31%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P V C C VGH FA+DCP QGG +
Sbjct: 314 PANVECRKCSEVGH-----------------------------FAKDCP--QGGGRA--- 339
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
C CG GH+A++C C NC + GH +++C C NC +
Sbjct: 340 ----CRNCGQEGHMAKECDQ--PRDMSTVTCRNCEQQGHYSKECPLPRDWSKVQCSNCQE 393
Query: 246 PGHFAREC 253
GH C
Sbjct: 394 YGHTKVRC 401
>gi|158297099|ref|XP_317381.3| AGAP008075-PA [Anopheles gambiae str. PEST]
gi|157015032|gb|EAA12317.4| AGAP008075-PA [Anopheles gambiae str. PEST]
Length = 153
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 22/125 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+ +GH AR+C + CY C H ARDC S + + C
Sbjct: 46 CYKCNQMGHFARDCKED---------LDRCYRCNGSGHIARDC--------SLSPDDSCC 88
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ C GHLAR+C + S CYNC KSGH++R+C +G SC++CGK GH +
Sbjct: 89 YNCNQSGHLARNCPEK-SDRDMNVSCYNCNKSGHISRNCPSGDK----SCYSCGKIGHLS 143
Query: 251 RECTK 255
R+CT+
Sbjct: 144 RDCTE 148
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---------CFKCGGYGHLARDCITRG 207
+ C+ C P H+ARDC GG C+KC GH ARDC
Sbjct: 4 TNTCFKCDRPGHYARDCQNVGGGGGRGVGGPRDRRDFGRREKCYKCNQMGHFARDC---- 59
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
RCY C SGH+ARDC + C+NC + GH AR C + ++
Sbjct: 60 --KEDLDRCYRCNGSGHIARDCSL--SPDDSCCYNCNQSGHLARNCPEKSD 106
>gi|381398248|ref|ZP_09923652.1| Cold-shock protein DNA-binding protein [Microbacterium
laevaniformans OR221]
gi|380774214|gb|EIC07514.1| Cold-shock protein DNA-binding protein [Microbacterium
laevaniformans OR221]
Length = 164
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 39/54 (72%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
T +TG V WF+ KGYGFI PDDG ADLF H +I SDG++ L E+Q VEFD +
Sbjct: 97 TMATGTVKWFNSEKGYGFIAPDDGSADLFAHFSAIVSDGFKELREDQKVEFDAE 150
>gi|357145183|ref|XP_003573554.1| PREDICTED: glycine-rich protein 2b-like isoform 1 [Brachypodium
distachyon]
gi|357145187|ref|XP_003573555.1| PREDICTED: glycine-rich protein 2b-like isoform 2 [Brachypodium
distachyon]
gi|357145190|ref|XP_003573556.1| PREDICTED: glycine-rich protein 2b-like isoform 3 [Brachypodium
distachyon]
Length = 257
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 68/119 (57%), Gaps = 22/119 (18%)
Query: 159 GCYNCGDPEHFARDC-PRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT------RGSGGG 211
C+ CG+P H ARDC GG G C+ CG GHLARDC T G GGG
Sbjct: 139 ACFKCGEPGHMARDCFVSAPGGGGGGGGGGGACYNCGEPGHLARDCPTNGGGFRSGGGGG 198
Query: 212 GGGRCYNCGKSGHLARDCGA---------------GGAGGGGSCFNCGKPGHFARECTK 255
GGG CYNCG+ GHLARDC GG GGGG+C+NCG+PGH AR+CTK
Sbjct: 199 GGGNCYNCGEPGHLARDCPTNGGFGGGGGGGRFGGGGGGGGGNCYNCGEPGHMARDCTK 257
>gi|408398051|gb|EKJ77187.1| hypothetical protein FPSE_02637 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CYNC GH R+C R + N C NCG H DC +N
Sbjct: 270 ISCYNCGADGHRVRDCPEPRIDKN------ACKNCGKSGHKVADCEEPPNPANVE----- 318
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH A+DC GGG C NCG+ GH+A++C +C NC + GH
Sbjct: 319 -CRKCSEVGHFAKDCPQ-----GGGRACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGH 372
Query: 249 FAREC 253
+++EC
Sbjct: 373 YSKEC 377
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G +C NC +GHV++ CT + + CYNCG H RDCP + N+
Sbjct: 240 GLPLCNNCKELGHVSKFCTQEKMERT-DGPKISCYNCGADGHRVRDCPEPRIDKNA---- 294
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C CG GH DC C C + GH A+DC GG G +C NCG+
Sbjct: 295 ---CKNCGKSGHKVADC--EEPPNPANVECRKCSEVGHFAKDCPQGG---GRACRNCGQE 346
Query: 247 GHFARECTK 255
GH A+EC +
Sbjct: 347 GHMAKECDQ 355
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C C GH+++ C G + CYNCG GH RDC +C NCGK G
Sbjct: 244 CNNCKELGHVSKFCTQEKMERTDGPKISCYNCGADGHRVRDCPEPRIDKN-ACKNCGKSG 302
Query: 248 HFARECTKVAN 258
H +C + N
Sbjct: 303 HKVADCEEPPN 313
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
CF CG GH +C C C K GH+ +DC C NCG+ GHF
Sbjct: 53 CFGCGEIGHRRAECPNPQEMA-----CRYCKKEGHMRKDCPEAPPM---VCENCGEEGHF 104
Query: 250 ARECTK 255
+ C K
Sbjct: 105 RKHCEK 110
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 44/128 (34%), Gaps = 40/128 (31%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P V C C VGH FA+DCP QGG +
Sbjct: 314 PANVECRKCSEVGH-----------------------------FAKDCP--QGGGRA--- 339
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
C CG GH+A++C C NC + GH +++C C NC +
Sbjct: 340 ----CRNCGQEGHMAKECDQ--PRDMSTVTCRNCEQQGHYSKECPLPRDWSKVQCSNCQE 393
Query: 246 PGHFAREC 253
GH C
Sbjct: 394 YGHTKVRC 401
>gi|443735051|gb|ELU18906.1| hypothetical protein CAPTEDRAFT_180220 [Capitella teleta]
Length = 651
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ HFAR+CP ++ GGC KCG GH AR+C G GGGGG C+ C
Sbjct: 50 CYKCGEDGHFARECP------SAGGGGGGGCHKCGEEGHFARECPKAGGGGGGGRGCHKC 103
Query: 220 GKSGHLARDCGAG---GAGGGGSCFNCGKPGHFAREC 253
G+ GH AR+C + G GGG C CG+ GHFAREC
Sbjct: 104 GEEGHFARECPSAGSSGGGGGSGCRKCGEEGHFAREC 140
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C GH AREC S GGC+ CG+ HFAR+CP+ + GC
Sbjct: 50 CYKCGEDGHFARECPSAG-----GGGGGGCHKCGEEGHFARECPK----AGGGGGGGRGC 100
Query: 191 FKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCG-AGGAGGG 237
KCG GH AR+C + SGGGGG C CG+ GH AR+C + G GGG
Sbjct: 101 HKCGEEGHFARECPSAGSSGGGGGSGCRKCGEEGHFARECPNSEGGGGG 149
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 66/143 (46%), Gaps = 33/143 (23%)
Query: 98 GRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNS 157
GRGGGG G G CY C GH AREC S
Sbjct: 40 GRGGGGGGGG-----------------------CYKCGEDGHFARECP-----SAGGGGG 71
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGRC 216
GGC+ CG+ HFAR+CP+ + GC KCG GH AR+C + SGGGGG C
Sbjct: 72 GGCHKCGEEGHFARECPK----AGGGGGGGRGCHKCGEEGHFARECPSAGSSGGGGGSGC 127
Query: 217 YNCGKSGHLARDCGAGGAGGGGS 239
CG+ GH AR+C GGGG
Sbjct: 128 RKCGEEGHFARECPNSEGGGGGE 150
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CY CG+ GH AR+C + G GGGG C CG+ GHFAREC K
Sbjct: 49 GCYKCGEDGHFARECPSAGGGGGGGCHKCGEEGHFARECPK 89
>gi|429862592|gb|ELA37234.1| zinc knuckle transcription factor [Colletotrichum gloeosporioides
Nara gc5]
Length = 460
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 17/193 (8%)
Query: 68 LDVTAPGGAPVHSSKNNNTNNNSGYN-----NNRGGRGGGGAGFGGYWKGNNDSRRNNGG 122
L T AP H++ + N + +++ R AG+ + N + G
Sbjct: 191 LIATERALAPTHTNMDLQGNLGKKFTVQYRFSSQPDRAREKAGWPASAEENIARLADAGE 250
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
C NCD +GH A+ C + + + CYNCG+ H RDCP +
Sbjct: 251 PVSRLMQKCNNCDELGHTAKACPQD--PNEKVRVTITCYNCGEEGHRVRDCP-------T 301
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+ C CG H +C S G C C + GH RDC G GGG SC N
Sbjct: 302 PRIDKFACKNCGQSRHKVSECTEPRSAEGV--ECNKCNEMGHFGRDCPTAG-GGGRSCHN 358
Query: 243 CGKPGHFARECTK 255
CG+ GH ++ECT+
Sbjct: 359 CGQEGHISKECTE 371
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 22/129 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
+ CYNC GH R+C + R + C NCG H +C PR G
Sbjct: 284 ITCYNCGEEGHRVRDCPTPRI------DKFACKNCGQSRHKVSECTEPRSAEGVE----- 332
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C KC GH RDC T GGGG C+NCG+ GH++++C C NC +
Sbjct: 333 ---CNKCNEMGHFGRDCPT---AGGGGRSCHNCGQEGHISKECTEPRK---LKCRNCDEE 383
Query: 247 GHFARECTK 255
GH +R+C K
Sbjct: 384 GHHSRDCDK 392
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 41/126 (32%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ +GH F RDCP GG S
Sbjct: 330 GVECNKCNEMGH-----------------------------FGRDCPTAGGGGRS----- 355
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C CG GH++++C +C NC + GH +RDC C NCG+ G
Sbjct: 356 --CHNCGQEGHISKECTE-----PRKLKCRNCDEEGHHSRDCDKPQDVTRIKCMNCGEMG 408
Query: 248 HFAREC 253
H +C
Sbjct: 409 HKKYKC 414
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 19/100 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+NC GH +C + + G C CG H RDCP +
Sbjct: 44 ACFNCGQDGHNKADCPEPAKPFD-----GECKGCGQQGHMRRDCP---------DAPPMA 89
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C CG GH+ +DC + C NC + GHL +C
Sbjct: 90 CRSCGEEGHIRKDCPNKPPEV-----CRNCHEEGHLVVNC 124
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG C+NC GH+++ECT R+ C NC + H +RDC + Q +
Sbjct: 352 GGRSCHNCGQEGHISKECTEPRKLK--------CRNCDEEGHHSRDCDKPQDVTRI---- 399
Query: 187 SGGCFKCGGYGHLARDC 203
C CG GH C
Sbjct: 400 --KCMNCGEMGHKKYKC 414
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G C+NCG+ GH DC G C CG+ GH R+C
Sbjct: 43 GACFNCGQDGHNKADCPEPAKPFDGECKGCGQQGHMRRDC 82
>gi|403183422|gb|EJY58088.1| AAEL017419-PA [Aedes aegypti]
Length = 157
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+ +GH AR+C + CY C H ARDC S + + C
Sbjct: 50 CYKCNQMGHFARDCKED---------LDRCYRCNGSGHIARDC--------SLSPDDSCC 92
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ C GHLAR+C + S CYNC KSGH++R+C G SC++CGK GH +
Sbjct: 93 YNCNQSGHLARNCPEK-SDRDMNVSCYNCNKSGHISRNCPTGDK----SCYSCGKIGHLS 147
Query: 251 RECTK 255
R+CT+
Sbjct: 148 RDCTE 152
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 22/113 (19%)
Query: 160 CYNCGDPEHFARDCP--------------RQQGGSNSYNNNSGGCFKCGGYGHLARDCIT 205
C+ C P H+ARDC R + C+KC GH ARDC
Sbjct: 6 CFKCDRPGHYARDCQNVGGGGGGGRPGGPRDRQFGGGGGGRREKCYKCNQMGHFARDC-- 63
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
RCY C SGH+ARDC + C+NC + GH AR C + ++
Sbjct: 64 ----KEDLDRCYRCNGSGHIARDCSL--SPDDSCCYNCNQSGHLARNCPEKSD 110
>gi|159123044|gb|EDP48164.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
fumigatus A1163]
Length = 233
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 60/137 (43%), Gaps = 31/137 (22%)
Query: 139 HVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS------------------ 180
HV +C + R N N G CYNC P H AR+CP G+
Sbjct: 56 HVQADCPTLRLNGGAN---GRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGFRGG 112
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG----G 236
+ C+KCGG H ARDC +CY CGK GH++RDC A G
Sbjct: 113 YGGYPRAATCYKCGGPNHFARDCQAHAM------KCYACGKLGHISRDCTAPNGGPLSSA 166
Query: 237 GGSCFNCGKPGHFAREC 253
G C+ C + GH +R+C
Sbjct: 167 GKVCYKCSQAGHISRDC 183
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 49/123 (39%), Gaps = 40/123 (32%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
N S C + P H + CPR + + H+ DC T GG G
Sbjct: 29 NVSIPCQSGKQPGHESSSCPRPRTTES----------------HVQADCPTLRLNGGANG 72
Query: 215 RCYNCGKSGHLARDCGAGGAGGG------------------------GSCFNCGKPGHFA 250
RCYNC + GHLAR+C A +G G +C+ CG P HFA
Sbjct: 73 RCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFA 132
Query: 251 REC 253
R+C
Sbjct: 133 RDC 135
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 34/111 (30%)
Query: 168 HFARDCP--RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG------------ 213
H DCP R GG+N G C+ C GHLAR+C SG G G
Sbjct: 56 HVQADCPTLRLNGGAN------GRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGF 109
Query: 214 ----------GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CG H ARDC A C+ CGK GH +R+CT
Sbjct: 110 RGGYGGYPRAATCYKCGGPNHFARDCQAHAM----KCYACGKLGHISRDCT 156
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + ++ CY CG H +RDC GG S
Sbjct: 117 PRAATCYKCGGPNHFARDCQA---------HAMKCYACGKLGHISRDCTAPNGGPLSSAG 167
Query: 186 NSGGCFKCGGYGHLARDC 203
C+KC GH++RDC
Sbjct: 168 KV--CYKCSQAGHISRDC 183
>gi|348560546|ref|XP_003466074.1| PREDICTED: protein lin-28 homolog B-like isoform 2 [Cavia
porcellus]
Length = 274
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 28/183 (15%)
Query: 2 AQLTRSTGKVTWFDGAKGYGFIR-------PDDGGADLFVHQKSIKSDGYRTLYENQSVE 54
+Q+ TG WF+ G+GFI P D D+FVHQ + +G+R+L E + VE
Sbjct: 25 SQVLHGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVE 84
Query: 55 FDVQLEADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNN 114
F + + G ++L VT PGG P S+ +G R W+ +
Sbjct: 85 FTFKKSSKG-LESLRVTGPGGTPCLGSERRPKGKTLQKRKPKGDR----------WRRQD 133
Query: 115 ---DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
D + G CYNC G+ H A+EC+ C+ C H
Sbjct: 134 LLMDQKWTVGEEESRMTPRCYNCGGLDHHAKECS-------LPPQPKKCHYCQSVMHMVA 186
Query: 172 DCP 174
+CP
Sbjct: 187 NCP 189
>gi|242063850|ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
gi|241933045|gb|EES06190.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
Length = 251
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 72/127 (56%), Gaps = 30/127 (23%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------CFKCGGYGHLARDCITRGSG 209
+G CY CG+P H ARDCP GG Y GG CFKCG GH+ARDC + G G
Sbjct: 123 AGACYKCGEPGHMARDCPSADGGGGGYGGGGGGYGGGGGGCFKCGEPGHMARDCPSGGGG 182
Query: 210 GGGGG-----------RCYNCGKSGHLARDCGAGGAGGGG------------SCFNCGKP 246
GGGG CYNCG++GH+ARDC +GG GGGG SC+NCG+
Sbjct: 183 YGGGGGGGYGGGGGGGACYNCGQTGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEA 242
Query: 247 GHFAREC 253
GH AR+C
Sbjct: 243 GHIARDC 249
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSG-------GCYNCGDPEHFARDCP 174
CYNC GH+AR+C S G CYNCG+ H ARDCP
Sbjct: 199 ACYNCGQTGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHIARDCP 250
>gi|225707608|gb|ACO09650.1| Cellular nucleic acid-binding protein [Osmerus mordax]
Length = 165
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CY+CG H ARDC + N
Sbjct: 61 ACYNCHRTGHISRDCKEPKKE-----REQVCYSCGKAGHVARDCD---------HANEQK 106
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 107 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVHCSKSNEM---NCYNCGKTGHL 155
Query: 250 ARECTKVAN 258
A+ECT A
Sbjct: 156 AKECTIEAT 164
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---CFKCGGYGHLARDCITRGSGGG 211
++S C+ CG H+ ++CP G G C++CG GH+ARDC
Sbjct: 4 SSSSECFGCGRSGHWIKNCPNAGGRGRGRGRGRGKDQFCYRCGEQGHMARDCEQSEDA-- 61
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC ++GH++RDC C++CGK GH AR+C
Sbjct: 62 ----CYNCHRTGHISRDCKEPKKEREQVCYSCGKAGHVARDC 99
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + + C+ C GH++RDC + CY+C
Sbjct: 42 CYRCGEQGHMARDCEQSEDA----------CYNCHRTGHISRDC--KEPKKEREQVCYSC 89
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+ARDC C++CG GH + C KV
Sbjct: 90 GKAGHVARDCDHANEQ---KCYSCGGFGHIQKLCDKV 123
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------CYNCGKSGHLARDCGAGGAGGG 237
++S CF CG GH ++C G G G GR CY CG+ GH+ARDC
Sbjct: 4 SSSSECFGCGRSGHWIKNCPNAGGRGRGRGRGRGKDQFCYRCGEQGHMARDC----EQSE 59
Query: 238 GSCFNCGKPGHFARECTK 255
+C+NC + GH +R+C +
Sbjct: 60 DACYNCHRTGHISRDCKE 77
>gi|412986462|emb|CCO14888.1| predicted protein [Bathycoccus prasinos]
Length = 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECT-SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GG +VC+ C GH R+C N ++N + CYNCG EH RDC
Sbjct: 50 GGIFKNKLVCFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDCTEPNS-- 107
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
N CF C GHL+R+C SG GG+C C HLARDC GA
Sbjct: 108 ---NFAFAKCFVCDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHLARDCPKQGA----- 159
Query: 240 CFNCGKPGHFAREC 253
C CG+ GH ++EC
Sbjct: 160 CLRCGEEGHLSKEC 173
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
N C+ C H RDC GG + + C+ CG H RDC T + +
Sbjct: 55 NKLVCFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDC-TEPNSNFAFAK 113
Query: 216 CYNCGKSGHLARDCGAGGAG---GGGSCFNCGKPGHFARECTK 255
C+ C K GHL+R+C +G GG C C H AR+C K
Sbjct: 114 CFVCDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHLARDCPK 156
>gi|377569290|ref|ZP_09798460.1| putative cold shock protein [Gordonia terrae NBRC 100016]
gi|404217149|ref|YP_006671371.1| Cold shock protein [Gordonia sp. KTR9]
gi|441515563|ref|ZP_20997360.1| putative cold shock protein [Gordonia amicalis NBRC 100051]
gi|377533625|dbj|GAB43625.1| putative cold shock protein [Gordonia terrae NBRC 100016]
gi|403647948|gb|AFR51188.1| Cold shock protein [Gordonia sp. KTR9]
gi|441449668|dbj|GAC55321.1| putative cold shock protein [Gordonia amicalis NBRC 100051]
Length = 67
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MAQ G V WF+G KG+GFI PDD GAD+FVH SI G+R L ENQ VEFDV+
Sbjct: 1 MAQ-----GTVKWFNGEKGFGFIAPDDQGADVFVHYSSITGSGFRNLEENQRVEFDVEQG 55
Query: 61 ADGKYQALDVTA 72
A G QA +V+A
Sbjct: 56 AKGP-QATNVSA 66
>gi|345479378|ref|XP_003423940.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Nasonia
vitripennis]
Length = 162
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AREC ++ CY C H A+DC QQ Y C
Sbjct: 46 CFKCNQYGHFARECKEDQ---------DLCYRCNGVGHIAKDC--QQFQYTGYQGPEMSC 94
Query: 191 FKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
+ C GH+AR C G SG CY C K+GH+AR+C GGG +C+ C K GH
Sbjct: 95 YNCNKTGHMARSCPESGNDSGRFNMQSCYTCNKTGHIARNC---PEGGGKTCYICHKTGH 151
Query: 249 FARECTK 255
+REC +
Sbjct: 152 ISRECDQ 158
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG----------CFKCGGYGHLARDCIT 205
+S CY C HFAR+CP+ + CFKC YGH AR+C
Sbjct: 2 SSSACYKCNRMGHFARECPQGGATGGRGGDRRDRDGGFGRGREKCFKCNQYGHFAREC-- 59
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCG----AGGAGGGGSCFNCGKPGHFARECTKVAN 258
CY C GH+A+DC G G SC+NC K GH AR C + N
Sbjct: 60 ----KEDQDLCYRCNGVGHIAKDCQQFQYTGYQGPEMSCYNCNKTGHMARSCPESGN 112
>gi|70982370|ref|XP_746713.1| zinc knuckle nucleic acid binding protein [Aspergillus fumigatus
Af293]
gi|66844337|gb|EAL84675.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
fumigatus Af293]
Length = 233
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 60/137 (43%), Gaps = 31/137 (22%)
Query: 139 HVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS------------------ 180
HV +C + R N N G CYNC P H AR+CP G+
Sbjct: 56 HVQADCPTLRLNGGAN---GRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGLRGG 112
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG----G 236
+ C+KCGG H ARDC +CY CGK GH++RDC A G
Sbjct: 113 YGGYPRAATCYKCGGPNHFARDC------QAHAMKCYACGKLGHISRDCTAPNGGPLSSA 166
Query: 237 GGSCFNCGKPGHFAREC 253
G C+ C + GH +R+C
Sbjct: 167 GKVCYKCSQAGHISRDC 183
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 49/123 (39%), Gaps = 40/123 (32%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG 214
N S C + P H + CPR + + H+ DC T GG G
Sbjct: 29 NVSIPCQSGKQPGHESSSCPRPRTTES----------------HVQADCPTLRLNGGANG 72
Query: 215 RCYNCGKSGHLARDCGAGGAGGG------------------------GSCFNCGKPGHFA 250
RCYNC + GHLAR+C A +G G +C+ CG P HFA
Sbjct: 73 RCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGLRGGYGGYPRAATCYKCGGPNHFA 132
Query: 251 REC 253
R+C
Sbjct: 133 RDC 135
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 34/111 (30%)
Query: 168 HFARDCP--RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG------------ 213
H DCP R GG+N G C+ C GHLAR+C SG G G
Sbjct: 56 HVQADCPTLRLNGGAN------GRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGL 109
Query: 214 ----------GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
CY CG H ARDC A C+ CGK GH +R+CT
Sbjct: 110 RGGYGGYPRAATCYKCGGPNHFARDCQAHAM----KCYACGKLGHISRDCT 156
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C G H AR+C + ++ CY CG H +RDC GG S
Sbjct: 117 PRAATCYKCGGPNHFARDCQA---------HAMKCYACGKLGHISRDCTAPNGGPLSSAG 167
Query: 186 NSGGCFKCGGYGHLARDC 203
C+KC GH++RDC
Sbjct: 168 KV--CYKCSQAGHISRDC 183
>gi|403222865|dbj|BAM40996.1| cold shock protein [Theileria orientalis strain Shintoku]
Length = 110
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ R +G WF+ KGYGFI D G D+FVHQ I +DG+R+L EN+ VE +V LE D
Sbjct: 1 MARLSGTCKWFNSKKGYGFITLD-SGEDVFVHQSEIYADGFRSLRENEKVELEVVLENDR 59
Query: 64 KYQALDVTAPGGAPVHSSKN 83
K +A+ VT P G V S+N
Sbjct: 60 K-KAIHVTGPDGDYVMGSQN 78
>gi|348502965|ref|XP_003439037.1| PREDICTED: cellular nucleic acid-binding protein-like [Oreochromis
niloticus]
Length = 166
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CY CG H ARDC + N
Sbjct: 62 ACYNCHRSGHISRDCKEPKKE-----REQLCYTCGKAGHMARDCD---------HANEQK 107
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 108 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVHCSKASET---NCYNCGKAGHL 156
Query: 250 ARECTKVAN 258
A+ECT A
Sbjct: 157 AKECTIEAT 165
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGG----CFKCGGYGHLARDCITRGSGGGGGGR 215
C+ CG H+ + CP G G C++CG GH+ARDC
Sbjct: 9 CFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHMARDCDQTEDA------ 62
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C+ CGK GH AR+C
Sbjct: 63 CYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDC 100
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C GH+AR+C + CYNC H +RDC +
Sbjct: 41 LFCYRCGDQGHMARDC---------DQTEDACYNCHRSGHISRDCKEPKKEREQL----- 86
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GH+ARDC +CY+CG GH+ + C C+ CG+ GH
Sbjct: 87 -CYTCGKAGHMARDC-----DHANEQKCYSCGGFGHIQKLCDKV------KCYRCGEIGH 134
Query: 249 FARECTKVAN 258
A C+K +
Sbjct: 135 VAVHCSKASE 144
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR--------CYNCGKSGHLARDCGAGGAGGGGSCF 241
CF CG GH + C G G CY CG GH+ARDC +C+
Sbjct: 9 CFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHMARDCDQ----TEDACY 64
Query: 242 NCGKPGHFARECTK 255
NC + GH +R+C +
Sbjct: 65 NCHRSGHISRDCKE 78
>gi|449461615|ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
Length = 260
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+NC GH+A ECT+ C+NC +P H A CP
Sbjct: 61 PNVAICHNCGLPGHIASECTT----------KSLCWNCREPGHMASSCP----------- 99
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH ARDC G C NC K GH+A DC A C NC K
Sbjct: 100 NEGICHTCGKAGHRARDCTAPPMPPGDLRLCNNCYKQGHIAADCTNEKA-----CNNCRK 154
Query: 246 PGHFARECT 254
GH AR+C
Sbjct: 155 TGHLARDCP 163
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 54/127 (42%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC N C+NCG P H A +C
Sbjct: 46 LCKNCKRPGHFARECP----------NVAICHNCGLPGHIASEC-----------TTKSL 84
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C+ CGK+GH ARDC A G C NC K G
Sbjct: 85 CWNCREPGHMASSCPNEGI-------CHTCGKAGHRARDCTAPPMPPGDLRLCNNCYKQG 137
Query: 248 HFARECT 254
H A +CT
Sbjct: 138 HIAADCT 144
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 61/165 (36%), Gaps = 46/165 (27%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R PG + +C NC GH+A +CT N C NC H
Sbjct: 109 KAGHRARDCTAPPMPPGDLRLCNNCYKQGHIAADCT----------NEKACNNCRKTGHL 158
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GH+AR C G G R
Sbjct: 159 ARDCP-----------NDPICNLCNVSGHVARQCPKSNVLGDRGDRGISSGGGSGRGSGS 207
Query: 216 ------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C NC + GH++RDC G C NCG GH A EC
Sbjct: 208 GYRDVVCRNCQQLGHMSRDC----MGPLMICHNCGGRGHLAYECP 248
>gi|432865749|ref|XP_004070594.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oryzias latipes]
gi|432865751|ref|XP_004070595.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oryzias latipes]
Length = 166
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CY CG H ARDC + N
Sbjct: 62 ACYNCHRSGHISRDCKEPKKE-----REQLCYTCGKAGHMARDCD---------HANEQK 107
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 108 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVHCSKASET---NCYNCGKAGHL 156
Query: 250 ARECTKVAN 258
A+ECT A
Sbjct: 157 AKECTIEAT 165
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGG----CFKCGGYGHLARDCITRGSGGGGGGR 215
C+ CG P H+ + CP G G C++CG GH+ARDC
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCDQTEDA------ 62
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C+ CGK GH AR+C
Sbjct: 63 CYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDC 100
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C GH+AR+C + CYNC H +RDC +
Sbjct: 41 LFCYRCGDQGHMARDC---------DQTEDACYNCHRSGHISRDCKEPKKEREQL----- 86
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GH+ARDC +CY+CG GH+ + C C+ CG+ GH
Sbjct: 87 -CYTCGKAGHMARDC-----DHANEQKCYSCGGFGHIQKLCDKV------KCYRCGEIGH 134
Query: 249 FARECTKVAN 258
A C+K +
Sbjct: 135 VAVHCSKASE 144
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR---------CYNCGKSGHLARDCGAGGAGGGGSC 240
CF CG GH + C SG G GR CY CG GH+ARDC +C
Sbjct: 9 CFGCGRPGHWVKHC-PNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCDQ----TEDAC 63
Query: 241 FNCGKPGHFARECTK 255
+NC + GH +R+C +
Sbjct: 64 YNCHRSGHISRDCKE 78
>gi|295661570|ref|XP_002791340.1| zinc finger protein GIS2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280902|gb|EEH36468.1| zinc finger protein GIS2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 222
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 70/148 (47%), Gaps = 33/148 (22%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR--QQG---------- 178
CY+C G+GHV +C + R N SG CYNC H AR+CP QG
Sbjct: 44 CYHCQGLGHVQADCPTLRLNG--GATSGRCYNCNILGHLARNCPSTGMQGAGRGVPSARG 101
Query: 179 -------GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGK--SGHLARDC 229
G+ + + C+KCGG H ARDC + +CY CGK GH++RDC
Sbjct: 102 VFNSPFRGAFAGYARTATCYKCGGPNHFARDCQAQSM------KCYACGKLMQGHISRDC 155
Query: 230 GAGGAGG----GGSCFNCGKPGHFAREC 253
A G G C+ C + GH +R+C
Sbjct: 156 TAPNGGPLSSVGKVCYKCSQAGHISRDC 183
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 37/146 (25%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSN--------------RRNSNY 153
G+ + + + R NGG CYNC+ +GH+AR C S NS +
Sbjct: 51 GHVQADCPTLRLNGGA---TSGRCYNCNILGHLARNCPSTGMQGAGRGVPSARGVFNSPF 107
Query: 154 N------NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGY--GHLARDCIT 205
+ CY CG P HFARDC Q S C+ CG GH++RDC
Sbjct: 108 RGAFAGYARTATCYKCGGPNHFARDCQAQ----------SMKCYACGKLMQGHISRDCTA 157
Query: 206 R--GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C ++GH++RDC
Sbjct: 158 PNGGPLSSVGKVCYKCSQAGHISRDC 183
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 56/133 (42%), Gaps = 44/133 (33%)
Query: 159 GCYNCGDPEHFA------------RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT- 205
CY CG+ H+A CPR + + C+ C G GH+ DC T
Sbjct: 7 ACYKCGNIGHYAGYQTNDQLGHESNGCPRPR------TTETKQCYHCQGLGHVQADCPTL 60
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-------------------------SC 240
R +GG GRCYNC GHLAR+C + G G G +C
Sbjct: 61 RLNGGATSGRCYNCNILGHLARNCPSTGMQGAGRGVPSARGVFNSPFRGAFAGYARTATC 120
Query: 241 FNCGKPGHFAREC 253
+ CG P HFAR+C
Sbjct: 121 YKCGGPNHFARDC 133
>gi|389628260|ref|XP_003711783.1| zinc knuckle domain-containing protein [Magnaporthe oryzae 70-15]
gi|351644115|gb|EHA51976.1| zinc knuckle domain-containing protein [Magnaporthe oryzae 70-15]
Length = 199
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 28/145 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQGGSNSYN 184
+CY C GH++R+C S G CY CG+ H AR+C + G
Sbjct: 59 ICYRCSQPGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGG 118
Query: 185 NNSGG----------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
SGG C+ CGG GH++RDC+ G +CYNCG++GH +RD
Sbjct: 119 GYSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSRDCV-------NGSKCYNCGETGHFSRD 171
Query: 229 CGAGGAGGGGSCFNCGKPGHFAREC 253
C G C+ C +PGH EC
Sbjct: 172 CSKRSTTGEKMCYKCQQPGHVQAEC 196
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 69/153 (45%), Gaps = 35/153 (22%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GH++R C ++ CY C P H +RDCP G
Sbjct: 33 GAAKCYNCGGEGHISRACPEEPKDQKI------CYRCSQPGHISRDCPSGGAGGGGGGGG 86
Query: 187 SGG----CFKCGGYGHLARDC--------------------ITRGSGGGGGGRCYNCGKS 222
C+KCG GH+AR+C GG GG CY+CG
Sbjct: 87 GQSSGAECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGGAGGKTCYSCGGV 146
Query: 223 GHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GH++RDC G C+NCG+ GHF+R+C+K
Sbjct: 147 GHMSRDCV-----NGSKCYNCGETGHFSRDCSK 174
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 22/106 (20%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG P H ARDCP N + C+ CGG GH++R C CY C
Sbjct: 16 CYTCGQPNHQARDCP---------NRGAAKCYNCGGEGHISRACPEEPKDQKI---CYRC 63
Query: 220 GKSGHLARDCGAGG----------AGGGGSCFNCGKPGHFARECTK 255
+ GH++RDC +GG G C+ CG+ GH AR C+K
Sbjct: 64 SQPGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSK 109
>gi|58004785|gb|AAW62455.1| cellular nucleic acid binding protein mutant H128Q [synthetic
construct]
Length = 178
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +G + +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGQIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFA 170
C+ C GH AREC + G CY CG+ H A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 KDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCE 113
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ G ++CTKV
Sbjct: 114 HADEQ---KCYSCGEFGQIQKDCTKV 136
>gi|7263178|gb|AAF44118.1| cellular nucleic acid binding protein mutant H107Q [synthetic
construct]
Length = 178
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGQLARDCE---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGHIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPG AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGQLARDC 112
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFA 170
C+ C GH AREC + G CY CG+ H A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DC Q+ C+ CG GH+A+DC + CYNCGK G LARDC
Sbjct: 66 KDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGQLARDCE 113
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 114 HADE---QKCYSCGEFGHIQKDCTKV 136
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 27/93 (29%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR-----------------------CYNCGKS 222
+S CFKCG GH AR+C T G G GGGR CY CG+S
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 223 GHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GHLA+DC +C+NCG+ GH A++C +
Sbjct: 62 GHLAKDCDL----QEDACYNCGRGGHIAKDCKE 90
>gi|432865753|ref|XP_004070596.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oryzias latipes]
Length = 164
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CY CG H ARDC + N
Sbjct: 60 ACYNCHRSGHISRDCKEPKKE-----REQLCYTCGKAGHMARDCD---------HANEQK 105
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 106 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVHCSKASET---NCYNCGKAGHL 154
Query: 250 ARECTKVAN 258
A+ECT A
Sbjct: 155 AKECTIEAT 163
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGG--CFKCGGYGHLARDCITRGSGGGGGGRCY 217
C+ CG P H+ + CP G C++CG GH+ARDC CY
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDCDQTEDA------CY 62
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
NC +SGH++RDC C+ CGK GH AR+C
Sbjct: 63 NCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDC 98
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 103 GAGFGGYWKGN--NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G+W + N S G + CY C GH+AR+C + C
Sbjct: 11 GCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDC---------DQTEDAC 61
Query: 161 YNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCG 220
YNC H +RDC + C+ CG GH+ARDC +CY+CG
Sbjct: 62 YNCHRSGHISRDCKEPKKEREQL------CYTCGKAGHMARDC-----DHANEQKCYSCG 110
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH+ + C C+ CG+ GH A C+K +
Sbjct: 111 GFGHIQKLCDKV------KCYRCGEIGHVAVHCSKASE 142
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDCGAGGAGGGGSCFNC 243
CF CG GH + C G G CY CG GH+ARDC +C+NC
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDCDQ----TEDACYNC 64
Query: 244 GKPGHFARECTK 255
+ GH +R+C +
Sbjct: 65 HRSGHISRDCKE 76
>gi|300121901|emb|CBK22475.2| Cold-shock protein DNA-binding [Blastocystis hominis]
Length = 101
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 8 TGKVTWFDGAKGYGFIRPD---DGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
TGK WF+ KGYGFI PD D D+FVHQ SIKS G+R L E +SVEFDV GK
Sbjct: 24 TGKCKWFNNKKGYGFIIPDPGSDLTTDIFVHQSSIKSSGFRFLKEGESVEFDVTDGQKGK 83
Query: 65 YQALDVTAPGGA 76
A +VTAPGG
Sbjct: 84 V-ATNVTAPGGL 94
>gi|345564451|gb|EGX47414.1| hypothetical protein AOL_s00083g507 [Arthrobotrys oligospora ATCC
24927]
Length = 196
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 28/144 (19%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G VCYNC GH++REC S + + CY CG H +R+C + GS+ N
Sbjct: 38 GNPVCYNCGQDGHLSRECQSPPKEKS-------CYRCGQTGHISRECTNESSGSSYSGGN 90
Query: 187 SGG-------CFKCGGYGHLARDCITRGS---------GGGGGGRCYNCGKSGHLARDCG 230
SGG C+KCG GH+AR+C + + G G CY+CG GH++RDC
Sbjct: 91 SGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQTCYSCGGFGHMSRDCT 150
Query: 231 AGGAGGGGSCFNCGKPGHFARECT 254
G C+NCG+ GH +R+CT
Sbjct: 151 QGQ-----KCYNCGQIGHLSRDCT 169
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 44/150 (29%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC---PRQQGGSNSYNNNS 187
CYNC G GH A++C + CYNCG H +R+C P+++
Sbjct: 21 CYNCGGSGHQAKDCP--------KRGNPVCYNCGQDGHLSRECQSPPKEKS--------- 63
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGG-----------RCYNCGKSGHLARDCGAG---- 232
C++CG GH++R+C SG G CY CGK GH+AR+C +G
Sbjct: 64 --CYRCGQTGHISRECTNESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGG 121
Query: 233 -------GAGGGGSCFNCGKPGHFARECTK 255
+G G +C++CG GH +R+CT+
Sbjct: 122 FGGGNRYASGRGQTCYSCGGFGHMSRDCTQ 151
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 19/76 (25%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G CY+C G GH++R+CT ++ CYNCG H +RDC +Q
Sbjct: 133 GQTCYSCGGFGHMSRDCTQGQK----------CYNCGQIGHLSRDCTSEQDRV------- 175
Query: 188 GGCFKCGGYGHLARDC 203
C+KC GH+ +C
Sbjct: 176 --CYKCKKPGHIMSNC 189
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
G CYNC +GH++R+CTS + CY C P H +CP
Sbjct: 152 GQKCYNCGQIGHLSRDCTSEQDRV--------CYKCKKPGHIMSNCP 190
>gi|114797127|ref|YP_758844.1| cold shock DNA-binding protein [Hyphomonas neptunium ATCC 15444]
gi|114737301|gb|ABI75426.1| cold shock DNA-binding protein [Hyphomonas neptunium ATCC 15444]
Length = 69
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV-QLEADGKY 65
+TGKV WF+ KG+GFI+PDDGGAD+FVH +++ G +TL ENQS+ +++ + E GK
Sbjct: 2 ATGKVKWFNDQKGFGFIKPDDGGADIFVHISAVERSGLKTLAENQSISYELYKDERRGKT 61
Query: 66 QALDV 70
A+D+
Sbjct: 62 SAVDL 66
>gi|223973883|gb|ACN31129.1| unknown [Zea mays]
Length = 281
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 70/125 (56%), Gaps = 29/125 (23%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------CFKCGGYGHLARDCIT 205
G CY CG+P H ARDCP GG GG CFKCG GH+ARDC +
Sbjct: 155 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSS 214
Query: 206 RGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG------------SCFNCGKPGH 248
G G GGGG CYNCG++GH+ARDC +GG GGGG SC+NCG+ GH
Sbjct: 215 GGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGH 274
Query: 249 FAREC 253
AR+C
Sbjct: 275 IARDC 279
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 18/60 (30%)
Query: 214 GRCYNCGKSGHLARDCGAG------------------GAGGGGSCFNCGKPGHFARECTK 255
G CY CG+ GH+ARDC + G GGGG CF CG+PGH AR+C+
Sbjct: 155 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSS 214
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG-------GCYNCGDPEHFARDCP 174
CYNC GH+AR+C S G CYNCG+ H ARDCP
Sbjct: 230 CYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHIARDCP 280
>gi|322698317|gb|EFY90088.1| zinc knuckle transcription factor (CnjB), putative [Metarhizium
acridum CQMa 102]
Length = 452
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 62/142 (43%), Gaps = 23/142 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP---------------- 174
C NC +GH ++ CT + + C NCGD H RDCP
Sbjct: 248 CQNCGELGHSSKFCTQEKVEKKAQP-AISCSNCGDEGHRIRDCPEPRVDKFACRNCGKSG 306
Query: 175 -RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
R N + C KCG GH+ +DC GG C NCG+ GH+A+DC
Sbjct: 307 HRASDCEEPPNLENMECRKCGEKGHMGKDCPQ-----GGSRACRNCGQEGHIAKDCDQPR 361
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
+C NC K GHF+R+C +
Sbjct: 362 NMDNVTCRNCEKTGHFSRDCPE 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 150 NSNYNNNSGGCYNCGDPEHFARDCPRQ--QGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
+S +N C C H +CP Q + G++ NN CF CG GH A DC T
Sbjct: 18 DSGWNQPQVKCGACSQEGHEEPNCPNQHTEAGNDDANNK---CFNCGETGHRAADCPTPR 74
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C C K GH+ RDC C NCG+ GH + C
Sbjct: 75 DTA-----CRYCKKEGHMIRDCPDKPPM---VCDNCGQEGHVRKNC 112
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG 179
N G+ V C C GH C + + ++ + C+NCG+ H A DCP +
Sbjct: 17 NDSGWNQPQVKCGACSQEGHEEPNCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDT 76
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ Y C GH+ RDC + C NCG+ GH+ ++C
Sbjct: 77 ACRY---------CKKEGHMIRDCPDKPPMV-----CDNCGQEGHVRKNC 112
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC GH+A++C R N C NC HF+RDCP + S
Sbjct: 340 GSRACRNCGQEGHIAKDCDQPRNMDNVT-----CRNCEKTGHFSRDCPEPKDWSKVQ--- 391
Query: 187 SGGCFKCGGYGHLARDC 203
C C +GH C
Sbjct: 392 ---CSNCQKFGHTKVRC 405
>gi|357127669|ref|XP_003565501.1| PREDICTED: protein lin-28 homolog A-like [Brachypodium
distachyon]
Length = 140
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
R G V WF+ +KG+GFI P+DGG DLFVHQ +IKSDGYR+L E +VEF +
Sbjct: 4 RVKGTVKWFNVSKGFGFISPEDGGEDLFVHQSAIKSDGYRSLNEGDTVEFSI 55
>gi|326480350|gb|EGE04360.1| zinc knuckle transcription factor [Trichophyton equinum CBS 127.97]
Length = 473
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 23/142 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-----------QGG 179
C NC +GH+ + C S C NC P H ARDC +GG
Sbjct: 268 CSNCGKMGHIMKSCKEEL--SVVERVEVKCVNCKQPGHRARDCKEARVDRFACRNCGKGG 325
Query: 180 SNSYNNNSG------GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
S + C +C GH A+DC GGG C NCG H+ARDC
Sbjct: 326 HRSNDRTEPRSAEGVECKRCNEVGHFAKDC----PQGGGSRACRNCGSEDHIARDCDQPR 381
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
+C NC + GHF+R+CTK
Sbjct: 382 NMANVTCRNCEEMGHFSRDCTK 403
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ VGH A++C S C NCG +H ARDC + + +N
Sbjct: 339 GVECKRCNEVGHFAKDCPQG-------GGSRACRNCGSEDHIARDCDQPRNMANVT---- 387
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C C GH +RDC + +C CG+ GH R C A
Sbjct: 388 --CRNCEEMGHFSRDCTKKKDWSKV--KCSCCGEMGHTIRRCPQAPA 430
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
N N C NCG HFAR+CP + SG CF CG GH DC +
Sbjct: 47 NANGDTCRNCGQAGHFARECPEPR-------KPSGACFNCGQEGHNKSDC---PNPRVFT 96
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G C C K GH A +C C NC GH ECT+
Sbjct: 97 GTCRVCEKEGHPAAECPDRPP---DICKNCKGEGHKTMECTE 135
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 215 RCYNCGKSGHLARDCGAGGA---GGGGSCFNCGKPGHFARECTK 255
+C NCGK GH+ + C + C NC +PGH AR+C +
Sbjct: 267 KCSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHRARDCKE 310
>gi|255538826|ref|XP_002510478.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223551179|gb|EEF52665.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 256
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 105 GFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCG 164
GF NN R + P VC NC GH+A ECT+ R C+NC
Sbjct: 46 GFSQSSLCNNCKRPGHFARECPNVAVCNNCGLPGHIAAECTTQSR----------CWNCR 95
Query: 165 DPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGH 224
+P H A +CP N G C CG GH ARDC T G C NC K GH
Sbjct: 96 EPGHVASNCP-----------NEGICHSCGKSGHRARDCSTPDMPPGDLRLCNNCYKPGH 144
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+A C A C NC K GH AR+C
Sbjct: 145 IAAQCTNDKA-----CKNCRKTGHVARDC 168
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR-------- 206
+ S C NC P HFAR+CP N C CG GH+A +C T+
Sbjct: 48 SQSSLCNNCKRPGHFARECP-----------NVAVCNNCGLPGHIAAECTTQSRCWNCRE 96
Query: 207 ----GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG--SCFNCGKPGHFARECT 254
S G C++CGKSGH ARDC G C NC KPGH A +CT
Sbjct: 97 PGHVASNCPNEGICHSCGKSGHRARDCSTPDMPPGDLRLCNNCYKPGHIAAQCT 150
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 30/123 (24%)
Query: 124 YGPGGVV--------CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
Y PG + C NC GHVAR+C N N+ N +G H AR CP+
Sbjct: 140 YKPGHIAAQCTNDKACKNCRKTGHVARDC-QNEPVCNFCNIAG---------HVARQCPK 189
Query: 176 -----QQGGSNSYN-NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
++GG +N C C GH++RDCI G C+NCG GH A +C
Sbjct: 190 VDIHAERGGWGRHNGYRDLICRTCNQVGHMSRDCI------GPMIICHNCGGRGHRAFEC 243
Query: 230 GAG 232
+G
Sbjct: 244 PSG 246
>gi|363543235|ref|NP_001241832.1| uncharacterized protein LOC100857032 [Zea mays]
gi|224033945|gb|ACN36048.1| unknown [Zea mays]
gi|413926630|gb|AFW66562.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
Length = 249
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 70/125 (56%), Gaps = 29/125 (23%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------CFKCGGYGHLARDCIT 205
G CY CG+P H ARDCP GG GG CFKCG GH+ARDC +
Sbjct: 123 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSS 182
Query: 206 RGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG------------SCFNCGKPGH 248
G G GGGG CYNCG++GH+ARDC +GG GGGG SC+NCG+ GH
Sbjct: 183 GGGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGH 242
Query: 249 FAREC 253
AR+C
Sbjct: 243 IARDC 247
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 18/59 (30%)
Query: 214 GRCYNCGKSGHLARDCGAG------------------GAGGGGSCFNCGKPGHFARECT 254
G CY CG+ GH+ARDC + G GGGG CF CG+PGH AR+C+
Sbjct: 123 GACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCS 181
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG-------GCYNCGDPEHFARDCP 174
CYNC GH+AR+C S G CYNCG+ H ARDCP
Sbjct: 198 CYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHIARDCP 248
>gi|224080454|ref|XP_002306137.1| predicted protein [Populus trichocarpa]
gi|222849101|gb|EEE86648.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+NC GH+A ECT+ C+NC +P H A +CP
Sbjct: 53 PNVAICHNCGLPGHIASECTT----------KSLCWNCREPGHMASNCP----------- 91
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH A++C G C NC K GH+A DC A C NC K
Sbjct: 92 NEGICHTCGKAGHRAKECTAPPMPPGDLRLCNNCYKQGHIAADCTNDKA-----CNNCRK 146
Query: 246 PGHFARECT 254
GH AREC
Sbjct: 147 TGHLARECP 155
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 55/127 (43%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC N C+NCG P H A +C
Sbjct: 38 LCKNCKRPGHYARECP----------NVAICHNCGLPGHIASEC-----------TTKSL 76
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A +C G C+ CGK+GH A++C A G C NC K G
Sbjct: 77 CWNCREPGHMASNCPNEGI-------CHTCGKAGHRAKECTAPPMPPGDLRLCNNCYKQG 129
Query: 248 HFARECT 254
H A +CT
Sbjct: 130 HIAADCT 136
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 23/99 (23%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
S C NC P H+AR+CP N C CG GH+A +C T+
Sbjct: 35 QSNLCKNCKRPGHYARECP-----------NVAICHNCGLPGHIASECTTKSL------- 76
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C+NC + GH+A +C G C CGK GH A+ECT
Sbjct: 77 CWNCREPGHMASNCP-----NEGICHTCGKAGHRAKECT 110
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 61/154 (39%), Gaps = 35/154 (22%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + ++ PG + +C NC GH+A +CT N C NC H
Sbjct: 101 KAGHRAKECTAPPMPPGDLRLCNNCYKQGHIAADCT----------NDKACNNCRKTGHL 150
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR---------CYNCG 220
AR+CP N C C GH+AR C G GG C NC
Sbjct: 151 ARECP-----------NEPICNMCNVAGHVARQCPKSNMLGDRGGMRSGGYQDIVCRNCH 199
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
+ GH++RDC G C NCG GH A EC
Sbjct: 200 QYGHMSRDC----MGPLMICHNCGGRGHRAIECP 229
>gi|408480680|ref|ZP_11186899.1| cold-shock DNA-binding protein family [Pseudomonas sp. R81]
Length = 67
Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ KG+GFI PDDG AD+FVH +IKSDG++TL E Q VEF+V A G
Sbjct: 2 ATGTVKWFNAEKGFGFITPDDGSADVFVHYSAIKSDGFKTLEEGQKVEFEVTQGAKG 58
>gi|401400662|ref|XP_003880829.1| lin-28 homolog B, related [Neospora caninum Liverpool]
gi|325115241|emb|CBZ50796.1| lin-28 homolog B, related [Neospora caninum Liverpool]
Length = 133
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ S G WFD KGYGFI +D G DLFVHQ I+++G+R L E + VEF +Q DG
Sbjct: 1 MAVSRGTCKWFDSKKGYGFITAED-GTDLFVHQSEIRAEGFRNLAEGEQVEFVIQTGNDG 59
Query: 64 KYQALDVTAPGGAPVH 79
+ +A++VT P G+ V
Sbjct: 60 RKKAVNVTGPNGSYVQ 75
>gi|406606389|emb|CCH42163.1| Gag-Pol polyprotein [Wickerhamomyces ciferrii]
Length = 180
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 35/153 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRN---------------SNYNNNSGG--CYNCGDPEHFARD 172
+CYNC GH A +C R++ SN + G CYNC H +++
Sbjct: 28 LCYNCSNPGHQANDCPEPRQDTQKQCYGCGGVGHVQSNCTEQAKGTRCYNCSQFGHISKE 87
Query: 173 C--PRQQGGSNSY------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCG-KSG 223
C P+Q+ S+ NN + C+KCGG H ARDC G +CY CG + G
Sbjct: 88 CPEPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDC------QAGVVKCYACGSQDG 141
Query: 224 HLARDCGAGGAGGGGS---CFNCGKPGHFAREC 253
HLA+DC + G S C+ CG GH +R+C
Sbjct: 142 HLAKDCTSASGGVNTSTKTCYKCGDVGHISRDC 174
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C GH+A CT R CYNC +P H A DCP + +
Sbjct: 8 TCYVCGQAGHLAEACTQEER---------LCYNCSNPGHQANDCPEPR------QDTQKQ 52
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA--------------G 235
C+ CGG GH+ +C + G RCYNC + GH++++C
Sbjct: 53 CYGCGGVGHVQSNCTEQAK----GTRCYNCSQFGHISKECPEPQQERPQRSFNQRPRSNN 108
Query: 236 GGGSCFNCGKPGHFAREC 253
+C+ CG P HFAR+C
Sbjct: 109 KATTCYKCGGPNHFARDC 126
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 56/114 (49%), Gaps = 23/114 (20%)
Query: 128 GVVCYNCDGVGHVARECTSNRRN---------SNYNNNSGGCYNCGDPEHFARDCPRQQG 178
G CYNC GH+++EC ++ NN + CY CG P HFARDC Q
Sbjct: 72 GTRCYNCSQFGHISKECPEPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDC---QA 128
Query: 179 GSNSYNNNSGGCFKCGGY-GHLARDCITRGSGG--GGGGRCYNCGKSGHLARDC 229
G C+ CG GHLA+DC T SGG CY CG GH++RDC
Sbjct: 129 GVVK-------CYACGSQDGHLAKDC-TSASGGVNTSTKTCYKCGDVGHISRDC 174
>gi|345876867|ref|ZP_08828628.1| ribosomal large subunit pseudouridine synthase E [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|344226067|gb|EGV52409.1| ribosomal large subunit pseudouridine synthase E [endosymbiont of
Riftia pachyptila (vent Ph05)]
Length = 87
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
STG V WF+ AKGYGF+ PDDG D+FVH SI +GY+TL E Q VEF++
Sbjct: 19 MSTGVVKWFNNAKGYGFVTPDDGDVDIFVHFSSITMEGYKTLKEGQKVEFEI 70
>gi|255543853|ref|XP_002512989.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223548000|gb|EEF49492.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 252
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 58/128 (45%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+NC GH+A ECT+ C+NC +P H A CP
Sbjct: 65 PNVAICHNCGLPGHIASECTT----------KSLCWNCREPGHMASHCP----------- 103
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH A++C + G C NC K GH+A DC A C NC K
Sbjct: 104 NEGICHTCGKAGHRAKECTAQPLPPGDLRLCNNCYKQGHIAADCTNDKA-----CNNCRK 158
Query: 246 PGHFAREC 253
GH AREC
Sbjct: 159 TGHLAREC 166
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 45/95 (47%), Gaps = 23/95 (24%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NC P HFAR+CP N C CG GH+A +C T+ C+NC
Sbjct: 51 CKNCKRPGHFARECP-----------NVAICHNCGLPGHIASECTTKSL-------CWNC 92
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
+ GH+A C G C CGK GH A+ECT
Sbjct: 93 REPGHMASHCP-----NEGICHTCGKAGHRAKECT 122
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 60/150 (40%), Gaps = 32/150 (21%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + ++ PG + +C NC GH+A +CT N C NC H
Sbjct: 113 KAGHRAKECTAQPLPPGDLRLCNNCYKQGHIAADCT----------NDKACNNCRKTGHL 162
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT------RGSGGGGGGRCYNCGKSG 223
AR+C N C C GH+AR C R S G C NC + G
Sbjct: 163 AREC-----------QNDPICNMCNVAGHVARHCPKANIFGDRRSSGYQDIVCRNCHQYG 211
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
H++RDC G C NCG GH A EC
Sbjct: 212 HMSRDC----MGPLMICHNCGGRGHRAVEC 237
>gi|289540930|gb|ADD09601.1| zinc knuckle (ccHc-type) family protein [Trifolium repens]
Length = 274
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 58/128 (45%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+NC GH+A EC++ C+NC +P H A CP
Sbjct: 65 PNIAVCHNCSLPGHIASECST----------KSLCWNCKEPGHMASTCP----------- 103
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH AR+C T G C NC K GH+A +C A C NC K
Sbjct: 104 NEGICHTCGKTGHRARECTTPQMPPGDLRLCNNCYKQGHIAVECTNEKA-----CNNCRK 158
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 159 TGHLARDC 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 59/140 (42%), Gaps = 31/140 (22%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
RR++ G+ + C NC GH AREC N C+NC P H A +C
Sbjct: 38 RRDSRRGFSQDNL-CKNCKRPGHYARECP----------NIAVCHNCSLPGHIASEC--- 83
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ C+ C GH+A C G C+ CGK+GH AR+C
Sbjct: 84 --------STKSLCWNCKEPGHMASTCPNEGI-------CHTCGKTGHRARECTTPQMPP 128
Query: 237 GGS--CFNCGKPGHFARECT 254
G C NC K GH A ECT
Sbjct: 129 GDLRLCNNCYKQGHIAVECT 148
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 60/172 (34%), Gaps = 53/172 (30%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R PG + +C NC GH+A ECT N C NC H
Sbjct: 113 KTGHRARECTTPQMPPGDLRLCNNCYKQGHIAVECT----------NEKACNNCRKTGHL 162
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GH+AR C G G
Sbjct: 163 ARDCP-----------NDPICNLCNVSGHVARQCPKSNVIGDRSGGGSFRGGGGYRDGGG 211
Query: 216 --------------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C NC + GH++RDC G C NCG GH A EC
Sbjct: 212 SFHSGGGGGYRDVVCRNCQQFGHMSRDCMGGPL---MICHNCGGRGHLAYEC 260
>gi|308805262|ref|XP_003079943.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116058400|emb|CAL53589.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 125
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTL----YENQ--SVEFDVQL 59
R GKV WF+ KG+G+I PDDG D+FVHQ ++K +G+R + Q SVEFDV+
Sbjct: 10 RRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVEH 69
Query: 60 EA--DGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGR 99
E+ D + +A+ VT GGAP+ + N +S RG R
Sbjct: 70 ESPTDERLKAVCVTGIGGAPLKAPPRTNYRRSS---KKRGPR 108
>gi|225449579|ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
gi|296086261|emb|CBI31702.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC NC GH+A EC N++ C+NC + H A CP
Sbjct: 55 PNVTVCNNCGLPGHIAAEC----------NSTTMCWNCKESGHLASQCP----------- 93
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N C CG GHLARDC + G C NC K GH+A DC A C NC K
Sbjct: 94 NDPVCHMCGKMGHLARDCSSPGLPAHDARLCNNCYKPGHIAADCTNEKA-----CNNCHK 148
Query: 246 PGHFARECT 254
GH AR+C
Sbjct: 149 TGHLARDCL 157
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 28/139 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+ C +GH+AR+C+S ++ ++ C NC P H A DC
Sbjct: 93 PNDPVCHMCGKMGHLARDCSSPGLPAH---DARLCNNCYKPGHIAADC-----------T 138
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG-------AGGAGGGG 238
N C C GHLARDC+ C C SGH+AR C GG
Sbjct: 139 NEKACNNCHKTGHLARDCLNEPV-------CNICNISGHVARQCPKSRLVPETGGPFRDI 191
Query: 239 SCFNCGKPGHFARECTKVA 257
+C NCG+PGH +R+C +
Sbjct: 192 TCHNCGQPGHISRDCVSIV 210
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 160 CYNCGDPEHFARDCPRQQGGSN--------SYNNNSGGCFKCGGYGHLARDCITRGSGGG 211
C C P HFARDCP +N + N++ C+ C GHLA C
Sbjct: 41 CNKCKRPGHFARDCPNVTVCNNCGLPGHIAAECNSTTMCWNCKESGHLASQC-------P 93
Query: 212 GGGRCYNCGKSGHLARDCGAGG--AGGGGSCFNCGKPGHFARECT 254
C+ CGK GHLARDC + G A C NC KPGH A +CT
Sbjct: 94 NDPVCHMCGKMGHLARDCSSPGLPAHDARLCNNCYKPGHIAADCT 138
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 30/119 (25%)
Query: 124 YGPGGVV--------CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
Y PG + C NC GH+AR+C N N N SG H AR CP+
Sbjct: 128 YKPGHIAADCTNEKACNNCHKTGHLARDCL-NEPVCNICNISG---------HVARQCPK 177
Query: 176 QQGGSNS---YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
+ + + + + C CG GH++RDC++ C NCG GH + +C +
Sbjct: 178 SRLVPETGGPFRDIT--CHNCGQPGHISRDCVSIVI-------CNNCGGRGHQSFECPS 227
>gi|315044853|ref|XP_003171802.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
gi|311344145|gb|EFR03348.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 75/158 (47%), Gaps = 38/158 (24%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + + CY CG H +R+CP G N+Y+
Sbjct: 27 GTPTCYNCGGQGHVSRECTQPPKEKS-------CYRCGMTGHISRECPSSGSGDNNYSGG 79
Query: 187 SGG-------CFKCGGYGHLARDCITRGSGGGGGG-------------------RCYNCG 220
C+KCG GH+AR+C +G G GGG CY+CG
Sbjct: 80 GYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGGGSYGGRSQTCYSCG 139
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 140 GYGHMARDCTQ-----GQKCYNCGEVGHVSRDCPTEAK 172
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 31/151 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSN--------RRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
P CY C GH++REC S+ + + CY CG H AR+C +Q
Sbjct: 48 PKEKSCYRCGMTGHISRECPSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQG 107
Query: 178 GGSNSYNN---------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKS 222
G S C+ CGGYGH+ARDC G +CYNCG+
Sbjct: 108 GSGYGGGYGNSGSGSYGGGSYGGRSQTCYSCGGYGHMARDCTQ-------GQKCYNCGEV 160
Query: 223 GHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GH++RDC A G C+ C + GH C
Sbjct: 161 GHVSRDCPT-EAKGERVCYKCKQAGHVQAAC 190
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 47/150 (31%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
Y ++ GC+NCG+ H ARDCP++ G YN C++CG G
Sbjct: 2 EYQSSGRGCFNCGESSHQARDCPKK-GTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTG 60
Query: 198 HLARDCITRGSG-----------GGGGGRCYNCGKSGHLARDCGAGGAGGGG-------- 238
H++R+C + GSG G GG CY CG+ GH+AR+C G G G
Sbjct: 61 HISRECPSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGS 120
Query: 239 -------------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 121 GSYGGGSYGGRSQTCYSCGGYGHMARDCTQ 150
>gi|219363251|ref|NP_001136805.1| uncharacterized protein LOC100216951 [Zea mays]
gi|194697184|gb|ACF82676.1| unknown [Zea mays]
gi|194699232|gb|ACF83700.1| unknown [Zea mays]
gi|195612644|gb|ACG28152.1| DNA-binding protein HEXBP [Zea mays]
gi|413955600|gb|AFW88249.1| DNA-binding protein HEXBP isoform 1 [Zea mays]
gi|413955601|gb|AFW88250.1| DNA-binding protein HEXBP isoform 2 [Zea mays]
Length = 261
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 58/127 (45%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC S C+ CG P H A +C ++ G
Sbjct: 40 LCNNCKRPGHFARECPS----------VAVCHTCGLPGHIAAEC-----------SSKGT 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C NCGKSGH+ARDC A G C NC KPG
Sbjct: 79 CWNCKEPGHMANSCPNEGI-------CRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPG 131
Query: 248 HFARECT 254
HF ECT
Sbjct: 132 HFREECT 138
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
NN R + P VC+ C GH+A EC+S G C+NC +P H A
Sbjct: 42 NNCKRPGHFARECPSVAVCHTCGLPGHIAAECSSK----------GTCWNCKEPGHMANS 91
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
CP N G C CG GH+ARDC G C NC K GH +C
Sbjct: 92 CP-----------NEGICRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPGHFREECTNE 140
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
A C NC + GH AR CT
Sbjct: 141 KA-----CNNCRQSGHIARNCT 157
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 59/161 (36%), Gaps = 39/161 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGGSN 181
+C NC GH+AR+CT+ C NC P HF +C RQ G
Sbjct: 97 ICRNCGKSGHIARDCTA---PPVPPGEVILCSNCYKPGHFREECTNEKACNNCRQSGHIA 153
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------------------C 216
N C C GHLAR C + G GG C
Sbjct: 154 RNCTNDPVCNLCNVAGHLARQCPKSDTLGERGGPPPFHGVGAPFRGVGVPFRGGLSDVIC 213
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C + GH +RDC AG C NCG GH A EC V+
Sbjct: 214 RACNQIGHASRDCMAGAF---MICHNCGGRGHTAYECPSVS 251
>gi|332021507|gb|EGI61872.1| CCHC-type zinc finger protein [Acromyrmex echinatior]
Length = 143
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 64/127 (50%), Gaps = 23/127 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AREC ++ CY C H A+DC QQG S C
Sbjct: 34 CFKCNQFGHFARECKEDQ---------DLCYRCNGVGHIAKDC--QQGPELS-------C 75
Query: 191 FKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
+ C GH+AR C G SG CYNC K+GH+AR+C GG +C+ CGK GH
Sbjct: 76 YNCNKTGHMARSCPEGGNDSGRFAMQSCYNCNKTGHIARNC---TEAGGKTCYICGKTGH 132
Query: 249 FARECTK 255
+REC +
Sbjct: 133 ISRECDQ 139
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 59/134 (44%), Gaps = 29/134 (21%)
Query: 137 VGHVARECTSNRRNSNYNNNSGG----------CYNCGDPEHFARDCPRQQGGSNSYNNN 186
+GH AREC + C+ C HFAR+C Q
Sbjct: 1 MGHFARECPQGGGGGRGDRGRDRDGGFGRGREKCFKCNQFGHFARECKEDQDL------- 53
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG----GSCFN 242
C++C G GH+A+DC G CYNC K+GH+AR C GG G SC+N
Sbjct: 54 ---CYRCNGVGHIAKDC-----QQGPELSCYNCNKTGHMARSCPEGGNDSGRFAMQSCYN 105
Query: 243 CGKPGHFARECTKV 256
C K GH AR CT+
Sbjct: 106 CNKTGHIARNCTEA 119
>gi|387914596|gb|AFK10907.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C ++ CYNCG P H ARDC + +
Sbjct: 63 ACYNCGKGGHIAKDCKEPKKE-----REQCCYNCGKPGHLARDCD---------HADEQK 108
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 109 CYSCGEFGHIQKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGEAGHL 157
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 158 ARECPIEAT 166
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNS--------YNNNSGGCFKCGGYGHLARDCITRG 207
+S C+ CG H+AR+CP G + C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQE 61
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCGK GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 DA------CYNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDC 101
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSN---------YNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C GH AREC + + CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQEDA-- 63
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ CG GH+A+DC + CYNCGK GHLARDC C+
Sbjct: 64 --------CYNCGKGGHIAKDC--KEPKKEREQCCYNCGKPGHLARDCDHADE---QKCY 110
Query: 242 NCGKPGHFARECTKV 256
+CG+ GH ++CTKV
Sbjct: 111 SCGEFGHIQKDCTKV 125
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 30/138 (21%)
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGS 180
G+ +CY C GH+A++C + CYNCG H A+DC P+++
Sbjct: 36 GFTAARDICYRCGESGHLAKDC---------DLQEDACYNCGKGGHIAKDCKEPKKEREQ 86
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
YN CG GHLARDC +CY+CG+ GH+ +DC C
Sbjct: 87 CCYN--------CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KC 127
Query: 241 FNCGKPGHFARECTKVAN 258
+ CG+ GH A C+K +
Sbjct: 128 YRCGETGHVAINCSKTSE 145
>gi|258569739|ref|XP_002543673.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
gi|237903943|gb|EEP78344.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
Length = 170
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C GH++R+C + S CY CG H AR+C + G +NS
Sbjct: 46 CYRCGLTGHISRDCPQGGESGE--TRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYG 103
Query: 190 ---------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
C+ CGGYGH+ARDC G +CYNCG+ GH++R+C G G C
Sbjct: 104 GGYGSRPQTCYSCGGYGHMARDCTQ-------GQKCYNCGEVGHVSRECTTEGK-GERVC 155
Query: 241 FNCGKPGHFAREC 253
+ C +PGH C
Sbjct: 156 YKCKQPGHVQAAC 168
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 68/142 (47%), Gaps = 34/142 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G +VCYNC G R+C+ + + CY CG H +RDCP+ G S
Sbjct: 25 GSLVCYNCGG-----RDCSEPAKEKS-------CYRCGLTGHISRDCPQ---GGESGETR 69
Query: 187 SGGCFKCGGYGHLARDC--------------ITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
S C+KCG GH+AR+C G G CY+CG GH+ARDC G
Sbjct: 70 SQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGHMARDCTQG 129
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
C+NCG+ GH +RECT
Sbjct: 130 Q-----KCYNCGEVGHVSRECT 146
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 27/123 (21%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYN---------NNSGGCFKCGGYGHLARDCITRG-S 208
GC+NCGD H ARDCP+ +G YN C++CG GH++RDC G S
Sbjct: 7 GCFNCGDSAHQARDCPK-KGSLVCYNCGGRDCSEPAKEKSCYRCGLTGHISRDCPQGGES 65
Query: 209 GGGGGGRCYNCGKSGHLARDCG----------------AGGAGGGGSCFNCGKPGHFARE 252
G CY CG+ GH+AR+C G +C++CG GH AR+
Sbjct: 66 GETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGHMARD 125
Query: 253 CTK 255
CT+
Sbjct: 126 CTQ 128
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C G GH+AR+CT ++ CYNCG+ H +R+C + G
Sbjct: 112 TCYSCGGYGHMARDCTQGQK----------CYNCGEVGHVSRECTTEGKGERV------- 154
Query: 190 CFKCGGYGHLARDC 203
C+KC GH+ C
Sbjct: 155 CYKCKQPGHVQAAC 168
>gi|440632924|gb|ELR02843.1| hypothetical protein GMDG_05776 [Geomyces destructans 20631-21]
Length = 525
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 113 NNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
N R NGG P G+ C NC+ +GH+ + C +R + S C+NC + H R
Sbjct: 247 ENIERLKNGGQPVPRGIPKCNNCNEMGHITKSCPEEKREV-LDRASVTCFNCNETGHRMR 305
Query: 172 DC--PRQ---------QGGSNSYNNNSG------GCFKCGGYGHLARDCITRGSGGGGGG 214
DC PR+ Q G +S C C GH +RDC T G GGG
Sbjct: 306 DCHKPREDRFACRNCKQSGHSSKECTEPRSAEGVECKNCNEMGHFSRDCPTGGGGGGA-- 363
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C+NCG+ GH ++DC +C NC + GH ++EC K
Sbjct: 364 -CHNCGQEGHRSKDCTEPRV---PTCRNCDEKGHISKECPK 400
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC GH+ +C + R +G CYNCG+ H DCP Q +G C
Sbjct: 45 CFNCGEQGHMKGDCPNPRAGGQL---AGECYNCGEVGHNKADCPNPQVPREF----TGTC 97
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C GH A DC T G C NCG GH C
Sbjct: 98 RVCEAVGHRASDCPT-----AGPKLCKNCGDEGHTITAC 131
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG--GGSCFNCGKPG 247
CF CG GH+ DC +GG G CYNCG+ GH DC G+C C G
Sbjct: 45 CFNCGEQGHMKGDCPNPRAGGQLAGECYNCGEVGHNKADCPNPQVPREFTGTCRVCEAVG 104
Query: 248 HFAREC 253
H A +C
Sbjct: 105 HRASDC 110
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Query: 162 NCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT--RGSGGGGGGRCYNC 219
N G PE + R + G C C GH+ + C R C+NC
Sbjct: 238 NIGWPETPEENIERLKNGGQPVPRGIPKCNNCNEMGHITKSCPEEKREVLDRASVTCFNC 297
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
++GH RDC +C NC + GH ++ECT+
Sbjct: 298 NETGHRMRDCHKPRE-DRFACRNCKQSGHSSKECTE 332
>gi|390572068|ref|ZP_10252294.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|389935975|gb|EIM97877.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
Length = 67
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD+GG DLF H IK++G+++L ENQ V FDV++ GK A
Sbjct: 3 TGTVKWFNDAKGFGFITPDEGGEDLFAHFSEIKAEGFKSLQENQKVSFDVKMGPKGKQAA 62
>gi|326475301|gb|EGD99310.1| Zinc knuckle transcription factor (CnjB) [Trichophyton tonsurans
CBS 112818]
Length = 494
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 23/142 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-----------QGG 179
C NC +GH+ + C S C NC P H ARDC +GG
Sbjct: 289 CSNCGKMGHIMKSCKEEL--SVVERVEVKCVNCKQPGHRARDCKEARVDRFACRNCGKGG 346
Query: 180 SNSYNNNSG------GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
S + C +C GH A+DC GGG C NCG H+ARDC
Sbjct: 347 HRSNDRTEPRSAEGVECKRCNEVGHFAKDC----PQGGGSRACRNCGSEDHIARDCDQPR 402
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
+C NC + GHF+R+CTK
Sbjct: 403 NMANVTCRNCEEMGHFSRDCTK 424
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ VGH A++C S C NCG +H ARDC + + +N
Sbjct: 360 GVECKRCNEVGHFAKDCPQG-------GGSRACRNCGSEDHIARDCDQPRNMANVT---- 408
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
C C GH +RDC + +C CG+ GH R C A GS
Sbjct: 409 --CRNCEEMGHFSRDCTKKKDWSKV--KCSCCGEMGHTIRRCPQAPADENGS 456
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
N N C NCG HFAR+CP + SG CF CG GH DC +
Sbjct: 47 NANGDTCRNCGQAGHFARECPEPR-------KPSGACFNCGQEGHNKSDC---PNPRVFT 96
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G C C K GH A +C C NC GH ECT+
Sbjct: 97 GTCRVCEKEGHPAAECPDRPP---DICKNCKGEGHKTMECTE 135
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 215 RCYNCGKSGHLARDCGAGGA---GGGGSCFNCGKPGHFARECTK 255
+C NCGK GH+ + C + C NC +PGH AR+C +
Sbjct: 288 KCSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHRARDCKE 331
>gi|347921162|ref|NP_001231665.1| zinc finger protein 9 [Danio rerio]
gi|347921635|ref|NP_956043.2| zinc finger protein 9 [Danio rerio]
Length = 163
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++R+C ++ CYNCG H ARDC + N C
Sbjct: 60 CYNCHRSGHISRDCKEPKKE-----REQCCYNCGKAGHVARDCD---------HANEQKC 105
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH A
Sbjct: 106 YSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHLA 154
Query: 251 RECTKVAN 258
R+C+ A+
Sbjct: 155 RDCSIEAS 162
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 103 GAGFGGYWKGN--NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G+W N N R G + CY C GH+AR+C C
Sbjct: 10 GCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------EQTEDAC 60
Query: 161 YNCGDPEHFARDC--PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
YNC H +RDC P+++ YN CG GH+ARDC +CY+
Sbjct: 61 YNCHRSGHISRDCKEPKKEREQCCYN--------CGKAGHVARDC-----DHANEQKCYS 107
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CG GH+ + C C+ CG+ GH A +C+K
Sbjct: 108 CGGFGHIQKLCDKV------KCYRCGEIGHVAVQCSKATE 141
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 26/96 (27%)
Query: 184 NNNSGGCFKCGGYGHLARDC------------------ITRGSGGGGGGR--------CY 217
+ ++ CF CG GH ++C R G R CY
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
NC +SGH++RDC C+NCGK GH AR+C
Sbjct: 62 NCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDC 97
>gi|261192892|ref|XP_002622852.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239588987|gb|EEQ71630.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|327352663|gb|EGE81520.1| hypothetical protein BDDG_04462 [Ajellomyces dermatitidis ATCC
18188]
Length = 190
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 69/150 (46%), Gaps = 29/150 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---------CYNCGDPEHFARDCPR 175
P CY C GH++R+CTS NY + CY CG H AR+C +
Sbjct: 47 APKEKTCYRCGQTGHISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQ 106
Query: 176 QQGGSNSYNNNSGG------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
G ++ +GG C+ CGGYGH+ARDC G +CYNCG+ G
Sbjct: 107 SGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCTQ-------GQKCYNCGEVG 159
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
H++RDC A G C+ C + GH C
Sbjct: 160 HVSRDCPT-EAKGERVCYKCKQTGHVQAAC 188
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 68/156 (43%), Gaps = 36/156 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN----- 181
G CYNC G GHV+RECT+ + CY CG H +RDC G N
Sbjct: 27 GTPTCYNCGGQGHVSRECTAAPKEKT-------CYRCGQTGHISRDCTSAGSGDNYTSGG 79
Query: 182 ---SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG----------------RCYNCGKS 222
C+KCG GH+AR+C G G G CY+CG
Sbjct: 80 YSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGY 139
Query: 223 GHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 140 GHMARDCTQ-----GQKCYNCGEVGHVSRDCPTEAK 170
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 45/148 (30%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
+Y + S GC+NCG+ H ARDCP++ G YN C++CG G
Sbjct: 2 DYQSGSRGCFNCGEASHQARDCPKK-GTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQTG 60
Query: 198 HLARDCITRGSG------------GGGGGRCYNCGKSGHLARDCGAGGAGGGG------- 238
H++RDC + GSG GG CY CG+ GH+AR+C G G
Sbjct: 61 HISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGG 120
Query: 239 -----------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 121 YGGGYGGGRQQTCYSCGGYGHMARDCTQ 148
>gi|225559017|gb|EEH07300.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 465
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 26/125 (20%)
Query: 133 NCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSGGC 190
NC+G+GH AR+CT R + C NCG P H + DC PR G
Sbjct: 286 NCNGMGHRARDCTEKR------IDKFSCRNCGQPGHRSSDCTEPRSAEGVE--------- 330
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+GH A+DC GGG C NCG+ GH++++C +C NC + GH++
Sbjct: 331 -----FGHFAKDC----PQGGGSRACRNCGEEGHISKECDKPRNLDTVTCRNCEEVGHYS 381
Query: 251 RECTK 255
R+CTK
Sbjct: 382 RDCTK 386
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NC +GH +R C R S C NC H ARDC ++ S C
Sbjct: 257 CVNCGQMGHGSRACPDER--SVVEKVEVKCVNCNGMGHRARDCTEKRIDKFS-------C 307
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
CG GH + DC S G + GH A+DC GG G +C NCG+ GH +
Sbjct: 308 RNCGQPGHRSSDCTEPRSAEGV--------EFGHFAKDCPQGG--GSRACRNCGEEGHIS 357
Query: 251 RECTKVAN 258
+EC K N
Sbjct: 358 KECDKPRN 365
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC GH+++EC R N ++ C NC + H++RDC +++ + NN
Sbjct: 343 GSRACRNCGEEGHISKECDKPR-----NLDTVTCRNCEEVGHYSRDCTKKKDWTKVQCNN 397
Query: 187 SGGCFKCGGYGHLARDC 203
C GH R C
Sbjct: 398 ------CKEMGHTVRRC 408
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
V C NC+ VGH +R+CT + + C NC + H R CP+ G N+
Sbjct: 369 VTCRNCEEVGHYSRDCTKKKDWTKVQ-----CNNCKEMGHTVRRCPKPVEGENA 417
>gi|402077716|gb|EJT73065.1| zinc knuckle domain-containing protein, variant [Gaeumannomyces
graminis var. tritici R3-111a-1]
gi|402077717|gb|EJT73066.1| zinc knuckle domain-containing protein [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 206
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 41/159 (25%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN-- 184
G CYNC G GH++R+C ++ CY C P H +RDCP+ GG
Sbjct: 34 GAAKCYNCGGEGHISRDCPEGQKEQKI------CYRCSQPGHISRDCPQSGGGGGGGGGG 87
Query: 185 -----NNSGGCFKCGGYGHLARDCITRGSGGGGGG-----------------------RC 216
+ C+KCG GH+AR+C GGGGG C
Sbjct: 88 GGGGGQSGAECYKCGEVGHIARNCSKAAGYGGGGGGGYGGGGGYSGGGGSYGGGGGGKTC 147
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
Y+CG GH++RDC G C+NCG+ GHF+R+C K
Sbjct: 148 YSCGGIGHMSRDCV-----NGSKCYNCGETGHFSRDCPK 181
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
CY CG P H ARDCP N + C+ CGG GH++RDC G CY
Sbjct: 16 ACYTCGQPNHQARDCP---------NRGAAKCYNCGGEGHISRDC---PEGQKEQKICYR 63
Query: 219 CGKSGHLARDCGAGGAG-------------GGGSCFNCGKPGHFARECTKVA 257
C + GH++RDC G G G C+ CG+ GH AR C+K A
Sbjct: 64 CSQPGHISRDCPQSGGGGGGGGGGGGGGGQSGAECYKCGEVGHIARNCSKAA 115
>gi|334335688|ref|YP_004540840.1| cold-shock DNA-binding domain-containing protein [Isoptericola
variabilis 225]
gi|334106056|gb|AEG42946.1| cold-shock DNA-binding domain protein [Isoptericola variabilis
225]
Length = 67
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI P+DG AD+F H +I+S GYRTL ENQ VEFDV
Sbjct: 2 ATGTVKWFNAEKGYGFIAPEDGSADVFAHFSAIQSSGYRTLEENQRVEFDV 52
>gi|326500674|dbj|BAJ95003.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 61/133 (45%), Gaps = 26/133 (19%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGGS 180
++C NC GH+AR+C S + C NC P HFA +C ++ G
Sbjct: 108 IICKNCRRPGHIARDCPS----------ASTCNNCNLPGHFAAECTSKTVCWNCKKSGHI 157
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
+ N C C GH+ARDC + G C NC K GH+A DC A C
Sbjct: 158 ATECKNEALCHTCSKTGHMARDC---PASGSNAKLCNNCFKPGHIAVDCTNDRA-----C 209
Query: 241 FNCGKPGHFAREC 253
NC +PGH AREC
Sbjct: 210 NNCRQPGHIAREC 222
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSN--------SYNNNSGGCFKCGGYGHLARDCITRGSGGG 211
C NC P H ARDCP +N + + C+ C GH+A +C
Sbjct: 110 CKNCRRPGHIARDCPSASTCNNCNLPGHFAAECTSKTVCWNCKKSGHIATEC-------K 162
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C+ C K+GH+ARDC A G+ C NC KPGH A +CT
Sbjct: 163 NEALCHTCSKTGHMARDCPASGS-NAKLCNNCFKPGHIAVDCT 204
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 55/131 (41%), Gaps = 33/131 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH+A +CT++R C NC P H AR+C N
Sbjct: 189 LCNNCFKPGHIAVDCTNDR----------ACNNCRQPGHIAREC-----------KNDPV 227
Query: 190 CFKCGGYGHLARDC---ITRGSGGGGGG----RCYNCGKSGHLARDCGAGGAGGGGSCFN 242
C C GHLAR C T S GG C CG+ GH++R+C C
Sbjct: 228 CNLCNVSGHLARSCPKTTTLASEIHGGPFRDISCRICGQPGHISRNCMVTVI-----CDT 282
Query: 243 CGKPGHFAREC 253
CG GH + EC
Sbjct: 283 CGGRGHMSYEC 293
>gi|7263180|gb|AAF44119.1| cellular nucleic acid binding protein mutant H128D [synthetic
construct]
Length = 178
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +G + +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGDIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFA 170
C+ C GH AREC + G CY CG+ H A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 KDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCE 113
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ G ++CTKV
Sbjct: 114 HADEQ---KCYSCGEFGDIQKDCTKV 136
>gi|308806684|ref|XP_003080653.1| glycogen debranching enzyme (ISS) [Ostreococcus tauri]
gi|116059114|emb|CAL54821.1| glycogen debranching enzyme (ISS) [Ostreococcus tauri]
Length = 141
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 4 LTRSTGK---VTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSV----EFD 56
LTR + VTWF+ +GYG++RP DG D+FVHQ ++ DG+R+++E + E +
Sbjct: 34 LTRRASRREQVTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIE 93
Query: 57 VQLEADGKYQALDVTAPGGAPVHSS 81
+L+ D + +A +VT P GAP+ +
Sbjct: 94 FELDDDERRRAKNVTGPAGAPLKKT 118
>gi|392414720|ref|YP_006451325.1| cold shock protein [Mycobacterium chubuense NBB4]
gi|390614496|gb|AFM15646.1| cold shock protein [Mycobacterium chubuense NBB4]
Length = 67
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ G V WF+G KG+GFI PD G AD+FVH I+ +GYRTL ENQ VEF+V+ A G
Sbjct: 1 MAQGTVKWFNGDKGFGFIAPDGGAADVFVHFSEIQGNGYRTLEENQRVEFNVEQGAKGP- 59
Query: 66 QALDVTA 72
QA+ VTA
Sbjct: 60 QAVGVTA 66
>gi|226503759|ref|NP_001149324.1| DNA-binding protein HEXBP [Zea mays]
gi|194697746|gb|ACF82957.1| unknown [Zea mays]
gi|195626396|gb|ACG35028.1| DNA-binding protein HEXBP [Zea mays]
gi|224035195|gb|ACN36673.1| unknown [Zea mays]
gi|414867604|tpg|DAA46161.1| TPA: DNA-binding protein HEXBP isoform 1 [Zea mays]
gi|414867605|tpg|DAA46162.1| TPA: DNA-binding protein HEXBP isoform 2 [Zea mays]
Length = 261
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 58/127 (45%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC S C+ CG P H A +C ++ G
Sbjct: 40 LCNNCKRPGHFARECPS----------VAVCHTCGLPGHIAAEC-----------SSKGV 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C NCGKSGH+ARDC A G C NC KPG
Sbjct: 79 CWNCKEPGHMANSCPNEGI-------CRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPG 131
Query: 248 HFARECT 254
HF ECT
Sbjct: 132 HFREECT 138
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
NN R + P VC+ C GH+A EC+S G C+NC +P H A
Sbjct: 42 NNCKRPGHFARECPSVAVCHTCGLPGHIAAECSSK----------GVCWNCKEPGHMANS 91
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
CP N G C CG GH+ARDC G C NC K GH +C
Sbjct: 92 CP-----------NEGICRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPGHFREECTNE 140
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
A C NC + GH AR CT
Sbjct: 141 KA-----CNNCRQSGHLARNCT 157
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 58/161 (36%), Gaps = 39/161 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGGSN 181
+C NC GH+AR+CT+ C NC P HF +C RQ G
Sbjct: 97 ICRNCGKSGHIARDCTA---PPVPPGEVILCSNCYKPGHFREECTNEKACNNCRQSGHLA 153
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------------------C 216
N C C GHLAR C + G GG C
Sbjct: 154 RNCTNDPVCNLCNVAGHLARQCPKSDTLGERGGPPPFRGVGAPFHDVGAPFRGGFSDVVC 213
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C + GH +RDC AG C NCG GH A EC +
Sbjct: 214 RACNQIGHTSRDCMAGAF---MICHNCGGRGHMAYECPSAS 251
>gi|426257255|ref|XP_004022245.1| PREDICTED: cellular nucleic acid-binding protein-like [Ovis aries]
Length = 170
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R CY CG P H ARDC Q+
Sbjct: 66 ICYNCGKSGHIAKDCAEPKREGER-----CCYTCGRPGHLARDCDHQE---------EQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH+ +DC +CY CG+ GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGKRGHIQKDCTQ--------VKCYRCGEIGHVAINCRKMSEV---NCYRCGESGHL 160
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 161 ARECPIEAT 169
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 30/132 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
V+CY C GH A++C + CYNCG H A+DC P+++G
Sbjct: 45 VICYRCGESGHHAKDC---------DLLDDICYNCGKSGHIAKDCAEPKREG-------- 87
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+ CG GHLARDC + +CY+CGK GH+ +DC C+ CG+
Sbjct: 88 ERCCYTCGRPGHLARDCDHQEE-----QKCYSCGKRGHIQKDCTQ------VKCYRCGEI 136
Query: 247 GHFARECTKVAN 258
GH A C K++
Sbjct: 137 GHVAINCRKMSE 148
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSN-----------SYNNNSGGCFKCGGYGHLARDCI 204
+S C+ CG H+AR C R S C++CG GH A+DC
Sbjct: 2 SSKECFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTLPVICYRCGESGHHAKDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCGKSGH+A+DC G C+ CG+PGH AR+C
Sbjct: 62 LLDDI------CYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDC 104
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 60/138 (43%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRR------------NSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C +GH AR C+ + CY CG+ H A+DC
Sbjct: 6 CFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTLPVICYRCGESGHHAKDC----- 60
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
+ C+ CG GH+A+DC G CY CG+ GHLARDC
Sbjct: 61 -----DLLDDICYNCGKSGHIAKDCAEPKREGERC--CYTCGRPGHLARDCDHQEEQ--- 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CGK GH ++CT+V
Sbjct: 111 KCYSCGKRGHIQKDCTQV 128
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 186 NSGGCFKCGGYGHLARDC---------------ITRGSGGGGGGRCYNCGKSGHLARDCG 230
+S CFKCG GH AR C + S CY CG+SGH A+DC
Sbjct: 2 SSKECFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTLPVICYRCGESGHHAKDCD 61
Query: 231 AGGAGGGGSCFNCGKPGHFARECTK 255
C+NCGK GH A++C +
Sbjct: 62 LLD----DICYNCGKSGHIAKDCAE 82
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
V CY C +GHVA C R+ S N CY CG+ H AR+CP
Sbjct: 128 VKCYRCGEIGHVAINC---RKMSEVN-----CYRCGESGHLARECP 165
>gi|34784873|gb|AAH56793.1| Zinc finger protein 9 [Danio rerio]
Length = 161
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CYNCG H ARDC + N
Sbjct: 57 ACYNCHRSGHISRDCKEPKKE-----REQCCYNCGKAGHVARDCD---------HANEQK 102
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 103 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHL 151
Query: 250 ARECTKVAN 258
AR+C+ A+
Sbjct: 152 ARDCSIEAS 160
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 103 GAGFGGYWKGN--NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G+W N N R G + CY C GH+AR+C C
Sbjct: 8 GCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------EQTEDAC 58
Query: 161 YNCGDPEHFARDC--PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
YNC H +RDC P+++ YN CG GH+ARDC +CY+
Sbjct: 59 YNCHRSGHISRDCKEPKKEREQCCYN--------CGKAGHVARDC-----DHANEQKCYS 105
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CG GH+ + C C+ CG+ GH A +C+K
Sbjct: 106 CGGFGHIQKLCDKV------KCYRCGEIGHVAVQCSKATE 139
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 26/94 (27%)
Query: 186 NSGGCFKCGGYGHLARDC------------------ITRGSGGGGGGR--------CYNC 219
++ CF CG GH ++C R G R CYNC
Sbjct: 2 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNC 61
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+SGH++RDC C+NCGK GH AR+C
Sbjct: 62 HRSGHISRDCKEPKKEREQCCYNCGKAGHVARDC 95
>gi|58004789|gb|AAW62456.1| cellular nucleic acid binding protein mutant H128A [synthetic
construct]
Length = 178
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C R+ CYNCG P H ARDC + +
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDCE---------HADEQK 119
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +G + +DC +CY CG +GH+A +C +C+ CG+ GH
Sbjct: 120 CYSCGEFGAIQKDCTK--------VKCYRCGDTGHVAINCSKTSEV---NCYRCGESGHL 168
Query: 250 ARECTKVAN 258
ARECT A
Sbjct: 169 ARECTIEAT 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFA 170
C+ C GH AREC + G CY CG+ H A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 KDCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCE 113
Query: 231 AGGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ G ++CTKV
Sbjct: 114 HADEQ---KCYSCGEFGAIQKDCTKV 136
>gi|357134970|ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 945
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 17/97 (17%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSY-------NNNSGGCFKCGGYGHLARDCITR 206
N +SG C+ C P HF+RDCP G + SY N +S CFKC GH +RDC +
Sbjct: 827 NASSGLCFKCNQPGHFSRDCP---GLTTSYGNSAVNANASSNLCFKCNQPGHYSRDCPAQ 883
Query: 207 GS-------GGGGGGRCYNCGKSGHLARDCGAGGAGG 236
GS G G C+ C + GH ARDC A AG
Sbjct: 884 GSSYPSSAGGNSGANLCFKCNQPGHYARDCPAQAAGA 920
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 14/92 (15%)
Query: 130 VCYNCDGVGHVAREC---TSNRRNS--NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
+C+ C+ GH +R+C T++ NS N N +S C+ C P H++RDCP Q +SY
Sbjct: 832 LCFKCNQPGHFSRDCPGLTTSYGNSAVNANASSNLCFKCNQPGHYSRDCPAQ---GSSYP 888
Query: 185 NNSGG------CFKCGGYGHLARDCITRGSGG 210
+++GG CFKC GH ARDC + +G
Sbjct: 889 SSAGGNSGANLCFKCNQPGHYARDCPAQAAGA 920
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 13/76 (17%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCPRQQGGS--- 180
+C+ C+ GH +R+C + + S+Y +++GG C+ C P H+ARDCP Q G+
Sbjct: 866 LCFKCNQPGHYSRDCPA--QGSSYPSSAGGNSGANLCFKCNQPGHYARDCPAQAAGAPQH 923
Query: 181 NSYNNNSGGCFKCGGY 196
+Y NN+ GGY
Sbjct: 924 PAYGNNASAA--SGGY 937
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 23/96 (23%)
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC----------- 229
N+Y N GG + G L+ T C CG +GH A++C
Sbjct: 751 NTYAMNMGGPNQFGQQASLSARVPTTSRATRYAQTCSVCGSNGHNAQNCPATMDDMHQPA 810
Query: 230 ------------GAGGAGGGGSCFNCGKPGHFAREC 253
AGG G CF C +PGHF+R+C
Sbjct: 811 PSVGFTASSYGSSAGGNASSGLCFKCNQPGHFSRDC 846
>gi|47223220|emb|CAG11355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 167
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++R+C +R CYNCG H AR+C + N C
Sbjct: 64 CYNCHKSGHISRDCKEPKREREQQ-----CYNCGKAGHMARECD---------HANEQKC 109
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
F CG GH+ + C +CY CG GH+A C +C+NCGK GH A
Sbjct: 110 FTCGTLGHIQKLC--------DKVKCYRCGGIGHVALQCSKASET---TCYNCGKAGHVA 158
Query: 251 RECTKVAN 258
++CT A+
Sbjct: 159 KDCTIEAS 166
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CGD H +DC + C+ C GH++RDC + +CYNC
Sbjct: 44 CYRCGDQGHMVKDC----------DQTEDSCYNCHKSGHISRDC--KEPKREREQQCYNC 91
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+AR+C CF CG GH + C KV
Sbjct: 92 GKAGHMARECDHANE---QKCFTCGTLGHIQKLCDKV 125
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
V CY C G+GHVA +C+ + CYNCG H A+DC
Sbjct: 125 VKCYRCGGIGHVALQCSKASETT--------CYNCGKAGHVAKDC 161
>gi|308805915|ref|XP_003080269.1| zinc finger, CCHC domain containing 9 (ISS) [Ostreococcus tauri]
gi|116058729|emb|CAL54436.1| zinc finger, CCHC domain containing 9 (ISS) [Ostreococcus tauri]
Length = 238
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNR-RNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GG V C+ C GVGH R+C + + CYNCG EH A C +
Sbjct: 44 GGIWRSKVTCFGCRGVGHTLRDCRVAKGGAAGSVRGEKTCYNCGSREHTASACAEKW--- 100
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
N CF CG GHL+R C +G GG C C HL +DC G S
Sbjct: 101 --TNYAHAKCFVCGETGHLSRSCGKNANGVYINGGCCKICRAKDHLVKDC----PHKGDS 154
Query: 240 CFNCGKPGHFARECTKVAN 258
C CG+ GHFA +CTKV N
Sbjct: 155 CIRCGERGHFAAQCTKVPN 173
>gi|239613570|gb|EEQ90557.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 185
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 69/150 (46%), Gaps = 29/150 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG---------CYNCGDPEHFARDCPR 175
P CY C GH++R+CTS NY + CY CG H AR+C +
Sbjct: 42 APKEKTCYRCGQTGHISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQ 101
Query: 176 QQGGSNSYNNNSGG------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
G ++ +GG C+ CGGYGH+ARDC G +CYNCG+ G
Sbjct: 102 SGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCTQ-------GQKCYNCGEVG 154
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
H++RDC A G C+ C + GH C
Sbjct: 155 HVSRDCPT-EAKGERVCYKCKQTGHVQAAC 183
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 40/143 (27%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN---------NNSGGCFKCGGYGHLARD 202
+Y + S GC+NCG+ H ARDCP++ G YN C++CG GH++RD
Sbjct: 2 DYQSGSRGCFNCGEASHQARDCPKK-GTPTCYNCGGRECTAAPKEKTCYRCGQTGHISRD 60
Query: 203 CITRGSG------------GGGGGRCYNCGKSGHLARDCGAGGAGGGG------------ 238
C + GSG GG CY CG+ GH+AR+C G G
Sbjct: 61 CTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGY 120
Query: 239 ------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 121 GGGRQQTCYSCGGYGHMARDCTQ 143
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 66/168 (39%), Gaps = 38/168 (22%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYN---------NNSGGCYNCGDPEHFARDCP 174
Y G C+NC H AR+C + YN CY CG H +RDC
Sbjct: 3 YQSGSRGCFNCGEASHQARDCPKKGTPTCYNCGGRECTAAPKEKTCYRCGQTGHISRDCT 62
Query: 175 RQQGGSN--------SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG------------ 214
G N C+KCG GH+AR+C G G G
Sbjct: 63 SAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGG 122
Query: 215 ----RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CY+CG GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 123 GRQQTCYSCGGYGHMARDCTQ-----GQKCYNCGEVGHVSRDCPTEAK 165
>gi|406863952|gb|EKD16998.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 545
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NCDG+GH R C ++ + CYNC + H RDCP + + C
Sbjct: 353 CGNCDGLGHTQRNCPQDKVEKEHT--VVKCYNCEETGHRIRDCPNPRP-------DKFAC 403
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
C GH +++C S G C C + GH +R+C GG GG +C NCG+ GH
Sbjct: 404 RNCKQSGHSSKECSEPRSAEGV--ECKKCNEVGHFSRECPQGGGGGSRACHNCGQEGHSK 461
Query: 251 RECT 254
+CT
Sbjct: 462 NDCT 465
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
V CYNC+ GH R+C + R + C NC H +++C PR G
Sbjct: 378 VKCYNCEETGHRIRDCPNPRP------DKFACRNCKQSGHSSKECSEPRSAEGVE----- 426
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGR-CYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
C KC GH +R+C GGGGG R C+NCG+ GH DC C NC
Sbjct: 427 ---CKKCNEVGHFSREC---PQGGGGGSRACHNCGQEGHSKNDCTNERV---LICRNCDA 477
Query: 246 PGHFARECTK 255
GH EC+K
Sbjct: 478 QGH---ECSK 484
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+NCG H DCP+ S GCF CG GH DC G C C
Sbjct: 136 CFNCGQEGHMKSDCPQPP--------KSRGCFNCGEEGHSKADCPNPAVAREFTGTCRVC 187
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+ GH A DC + C NC + GH C K
Sbjct: 188 EQQGHRAADCPSKPP---TVCKNCQEEGHEVVVCDK 220
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 190 CFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C C G GH R+C + +CYNC ++GH RDC +C NC + GH
Sbjct: 353 CGNCDGLGHTQRNCPQDKVEKEHTVVKCYNCEETGHRIRDC-PNPRPDKFACRNCKQSGH 411
Query: 249 FARECTK 255
++EC++
Sbjct: 412 SSKECSE 418
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C+NCG+ GH+ DC G CFNCG+ GH +C A
Sbjct: 135 GCFNCGQEGHMKSDCPQPPKSRG--CFNCGEEGHSKADCPNPA 175
>gi|374856977|dbj|BAL59830.1| cold shock protein ,beta-ribbon, CspA family [uncultured
candidate division OP1 bacterium]
Length = 69
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 46/60 (76%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TGKV WF+ AKGYGFI+ D+GG D+FVH +IK+DG++TL E Q+VEF++ +A G A
Sbjct: 5 TGKVKWFNDAKGYGFIQQDNGGPDVFVHFSAIKADGFKTLREGQAVEFEITSDAKGPRAA 64
>gi|154301789|ref|XP_001551306.1| hypothetical protein BC1G_10046 [Botryotinia fuckeliana B05.10]
Length = 533
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 90 SGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRR 149
S +++ R + G + N + + G G +C C+ +GH + CT R
Sbjct: 208 SWRKSSKHSRPKEKESWPGTPEENLERLADAGEPVDRGVPLCSRCNELGHTVKHCTEERV 267
Query: 150 NSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSG 209
+ C+NCG+ H RDCP + + C C GH +++C S
Sbjct: 268 DGERVQVQ--CFNCGEIGHRVRDCPIPR-------EDKFACRNCKKSGHSSKECPEPRSA 318
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G C NC + GH +RDC GG G GG C NC +PGH A++CT
Sbjct: 319 EGV--ECKNCNEIGHFSRDCPTGGGGDGGLCRNCNQPGHRAKDCT 361
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C+NC +GH R+C R + C NC H +++CP +
Sbjct: 274 VQCFNCGEIGHRVRDCPIPR------EDKFACRNCKKSGHSSKECPEPRSAEGVE----- 322
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C C GH +RDC T GGG GG C NC + GH A+DC C NC + GH
Sbjct: 323 -CKNCNEIGHFSRDCPT--GGGGDGGLCRNCNQPGHRAKDCTNERVM---ICRNCDEEGH 376
Query: 249 FARECTK 255
+EC K
Sbjct: 377 TGKECPK 383
>gi|392881264|gb|AFM89464.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH+A++C ++ CYNCG P H ARDC + +
Sbjct: 63 ACYNCGKGGHIAKDCKEPKKE-----REQCCYNCGKPGHLARDCD---------HADEQK 108
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH+ +DC +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 109 CYSCGEFGHIRKDCTK--------VKCYRCGETGHVAINCSKTSEV---NCYRCGEAGHL 157
Query: 250 ARECTKVAN 258
AREC A
Sbjct: 158 ARECPIEAT 166
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNS--------YNNNSGGCFKCGGYGHLARDCITRG 207
+S C+ CG H+AR+CP G + C++CG GHLA+DC +
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQE 61
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCGK GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 DA------CYNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDC 101
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSN---------YNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C+ C GH AREC + + CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQEDA-- 63
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCF 241
C+ CG GH+A+DC + CYNCGK GHLARDC C+
Sbjct: 64 --------CYNCGKGGHIAKDC--KEPKKEREQCCYNCGKPGHLARDCDHADE---QKCY 110
Query: 242 NCGKPGHFARECTKV 256
+CG+ GH ++CTKV
Sbjct: 111 SCGEFGHIRKDCTKV 125
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 30/138 (21%)
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGS 180
G+ +CY C GH+A++C + CYNCG H A+DC P+++
Sbjct: 36 GFTAARDICYRCGESGHLAKDC---------DLQEDACYNCGKGGHIAKDCKEPKKEREQ 86
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
YN CG GHLARDC +CY+CG+ GH+ +DC C
Sbjct: 87 CCYN--------CGKPGHLARDC-----DHADEQKCYSCGEFGHIRKDCTKV------KC 127
Query: 241 FNCGKPGHFARECTKVAN 258
+ CG+ GH A C+K +
Sbjct: 128 YRCGETGHVAINCSKTSE 145
>gi|308809325|ref|XP_003081972.1| putative DAK2 domain containing protein (ISS) [Ostreococcus tauri]
gi|116060439|emb|CAL55775.1| putative DAK2 domain containing protein (ISS), partial
[Ostreococcus tauri]
Length = 843
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 57/149 (38%), Gaps = 24/149 (16%)
Query: 131 CYNCDGVGHVARECT---------SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSN 181
C C +GH A EC S R C CG H+ARDCP G
Sbjct: 21 CNRCGQIGHWAGECALPDTRGPGASPMRPMGGARPGDKCSRCGGLGHYARDCPSPVGAIM 80
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGG---------GGGGRCYNCGKSGHLARDCGA- 231
G C CG GH AR+C R GG G C CG+ GH A C
Sbjct: 81 GVGARDGACRICGRMGHFARECRDRAGGGYDAPRRRLAGAEDVCNRCGEKGHWANMCPQP 140
Query: 232 -----GGAGGGGSCFNCGKPGHFARECTK 255
G+C NCG+ GH A+EC K
Sbjct: 141 DNRPESERKKLGACRNCGEEGHIAKECPK 169
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 54/106 (50%), Gaps = 23/106 (21%)
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI---TRGSGG------GG---G 213
P H+AR+CPR G+ S + C +CG GH A +C TRG G GG G
Sbjct: 2 PGHYARECPR---GAPSRGTDR--CNRCGQIGHWAGECALPDTRGPGASPMRPMGGARPG 56
Query: 214 GRCYNCGKSGHLARDCGA------GGAGGGGSCFNCGKPGHFAREC 253
+C CG GH ARDC + G G+C CG+ GHFAREC
Sbjct: 57 DKCSRCGGLGHYARDCPSPVGAIMGVGARDGACRICGRMGHFAREC 102
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 138 GHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSGG------ 189
GH AREC + + C CG H+A +C P +G S GG
Sbjct: 3 GHYARECPRGAPSRGTDR----CNRCGQIGHWAGECALPDTRGPGASPMRPMGGARPGDK 58
Query: 190 CFKCGGYGHLARDCITRGSG----GGGGGRCYNCGKSGHLARDCG--AGG---------A 234
C +CGG GH ARDC + G G C CG+ GH AR+C AGG A
Sbjct: 59 CSRCGGLGHYARDCPSPVGAIMGVGARDGACRICGRMGHFARECRDRAGGGYDAPRRRLA 118
Query: 235 GGGGSCFNCGKPGHFARECTKVAN 258
G C CG+ GH+A C + N
Sbjct: 119 GAEDVCNRCGEKGHWANMCPQPDN 142
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/142 (35%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNRRN-SNYNNNSGGCYNCGDPEHFARDC-PRQQGG 179
GG PG C C G+GH AR+C S G C CG HFAR+C R GG
Sbjct: 51 GGARPGDK-CSRCGGLGHYARDCPSPVGAIMGVGARDGACRICGRMGHFARECRDRAGGG 109
Query: 180 SNSYNNNSGG----CFKCGGYGHLARDCITRG----SGGGGGGRCYNCGKSGHLARDCGA 231
++ G C +CG GH A C S G C NCG+ GH+A++C
Sbjct: 110 YDAPRRRLAGAEDVCNRCGEKGHWANMCPQPDNRPESERKKLGACRNCGEEGHIAKECPK 169
Query: 232 GGAGGGGSCFNCGKPGHFAREC 253
C C + GH A+EC
Sbjct: 170 PQM-----CRICKQEGHIAKEC 186
Score = 41.6 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 19/97 (19%)
Query: 115 DSRRNNGGGY-------GPGGVVCYNCDGVGHVARECTS-NRRNSNYNNNSGGCYNCGDP 166
+ R GGGY VC C GH A C + R + G C NCG+
Sbjct: 101 ECRDRAGGGYDAPRRRLAGAEDVCNRCGEKGHWANMCPQPDNRPESERKKLGACRNCGEE 160
Query: 167 EHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
H A++CP+ Q C C GH+A++C
Sbjct: 161 GHIAKECPKPQ-----------MCRICKQEGHIAKEC 186
>gi|433608590|ref|YP_007040959.1| hypothetical protein BN6_68490 [Saccharothrix espanaensis DSM
44229]
gi|407886443|emb|CCH34086.1| hypothetical protein BN6_68490 [Saccharothrix espanaensis DSM
44229]
Length = 67
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 5/57 (8%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
MAQ G V WF+ KG+GFI P+DGGAD+FVH I+S+GYR+L ENQ V FDV
Sbjct: 1 MAQ-----GTVKWFNSEKGFGFISPEDGGADVFVHYSEIQSNGYRSLEENQRVSFDV 52
>gi|340793050|ref|YP_004758513.1| cold shock-like protein A [Corynebacterium variabile DSM 44702]
gi|340532960|gb|AEK35440.1| cold shock-like protein A [Corynebacterium variabile DSM 44702]
Length = 67
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STG V WF+ KG+GFI PDDG +D+FVH +I+S G+R+L E+Q V F+V+ A G
Sbjct: 2 STGTVKWFNAEKGFGFIAPDDGSSDIFVHYSAIQSSGFRSLEEDQKVSFEVEAGAKGP-A 60
Query: 67 ALDVT 71
A DVT
Sbjct: 61 AADVT 65
>gi|225075510|ref|ZP_03718709.1| hypothetical protein NEIFLAOT_00523 [Neisseria flavescens
NRL30031/H210]
gi|269213456|ref|ZP_05982011.2| cold shock transcription regulator protein [Neisseria cinerea
ATCC 14685]
gi|284800098|ref|ZP_05985718.2| cold shock transcription regulator protein [Neisseria subflava
NJ9703]
gi|224953145|gb|EEG34354.1| hypothetical protein NEIFLAOT_00523 [Neisseria flavescens
NRL30031/H210]
gi|269146157|gb|EEZ72575.1| cold shock transcription regulator protein [Neisseria cinerea
ATCC 14685]
gi|284795950|gb|EFC51297.1| cold shock transcription regulator protein [Neisseria subflava
NJ9703]
Length = 80
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PD+GG DLF H +I DG++TL E Q V FDV GK Q
Sbjct: 15 ATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMDGFKTLKEGQRVSFDVTTGPKGK-Q 73
Query: 67 ALDVTA 72
A ++ A
Sbjct: 74 AANIQA 79
>gi|170696311|ref|ZP_02887442.1| cold-shock DNA-binding domain protein [Burkholderia graminis
C4D1M]
gi|170138792|gb|EDT06989.1| cold-shock DNA-binding domain protein [Burkholderia graminis
C4D1M]
Length = 67
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PDDGG DLF H I+S+G+++L ENQ V F+V+ GK QA
Sbjct: 3 TGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIRSEGFKSLQENQKVSFEVKQGPKGK-QA 61
Query: 68 LDV 70
D+
Sbjct: 62 ADI 64
>gi|145356187|ref|XP_001422318.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582559|gb|ABP00635.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 76
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GKV WF+ KG+GFI P DG ++FVHQ I G+R+ +E++ VE++V ADG+ A+
Sbjct: 2 GKVKWFNVTKGFGFITPHDGSEEIFVHQTGISRAGFRSAWEDEEVEYEVS-NADGRPVAV 60
Query: 69 DVTAPGGAPV 78
+VT P GA V
Sbjct: 61 NVTGPNGAAV 70
>gi|357467427|ref|XP_003603998.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355493046|gb|AES74249.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 267
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 57/128 (44%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+NC GH+A EC++ C+NC +P H A CP
Sbjct: 70 PNVAVCHNCSLPGHIASECSTK----------SLCWNCKEPGHMASSCP----------- 108
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH AR+C G C NC K GH+A +C A C NC K
Sbjct: 109 NEGICHTCGKAGHRARECTVPQKPPGDLRLCNNCYKQGHIAVECTNEKA-----CNNCRK 163
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 164 TGHLARDC 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 31/140 (22%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
RR++ G+ + C NC GH REC N C+NC P H A +C
Sbjct: 43 RRDSRRGFSQDNL-CKNCKRPGHYVRECP----------NVAVCHNCSLPGHIASEC--- 88
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ C+ C GH+A C G C+ CGK+GH AR+C
Sbjct: 89 --------STKSLCWNCKEPGHMASSCPNEGI-------CHTCGKAGHRARECTVPQKPP 133
Query: 237 GGS--CFNCGKPGHFARECT 254
G C NC K GH A ECT
Sbjct: 134 GDLRLCNNCYKQGHIAVECT 153
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 60/160 (37%), Gaps = 41/160 (25%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R PG + +C NC GH+A ECT N C NC H
Sbjct: 118 KAGHRARECTVPQKPPGDLRLCNNCYKQGHIAVECT----------NEKACNNCRKTGHL 167
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC----------------ITRGSGGGGG 213
ARDCP N C C GH+AR C GG
Sbjct: 168 ARDCP-----------NDPICNLCNISGHVARQCPKSNVIGDRGGGGSLRGGYRDGGFRD 216
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C +C + GH++RDC G C NCG GH A EC
Sbjct: 217 VVCRSCQQFGHMSRDCMGGPL---MICQNCGGRGHQAYEC 253
>gi|70993356|ref|XP_751525.1| zinc knuckle transcription factor (CnjB) [Aspergillus fumigatus
Af293]
gi|66849159|gb|EAL89487.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus Af293]
Length = 509
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C NC+ GH AR+CT R + + PEH A DCP N +
Sbjct: 312 VKCVNCNASGHRARDCTEPRVDRS-------------PEHKAADCP------NPRSAEGV 352
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C +C GH A+DC C NCG H+ARDC +C NC + GH
Sbjct: 353 ECKRCNEMGHFAKDC----HQAPAPRTCRNCGSEDHMARDCDKPRDASIVTCRNCEEVGH 408
Query: 249 FARECTK 255
F+R+C +
Sbjct: 409 FSRDCPQ 415
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ +GH A++C + C NCG +H ARDC + + S
Sbjct: 351 GVECKRCNEMGHFAKDC-------HQAPAPRTCRNCGSEDHMARDCDKPRDAS------I 397
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C C GH +RDC + +C NCG+S A+D A G G
Sbjct: 398 VTCRNCEEVGHFSRDCPQKKD--WSKVKCNNCGESEQSAKD-----ARHKGQMLTNVTVG 450
Query: 248 HFARECTKVAN 258
H + C + A+
Sbjct: 451 HTIKRCLQAAS 461
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 46/117 (39%), Gaps = 19/117 (16%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC----ITRGS 208
Y+ C NCG+ H AR C ++ + C C GH ARDC + R
Sbjct: 280 YDKQIPKCGNCGEMGHTARGCKEERALVDRV---EVKCVNCNASGHRARDCTEPRVDRSP 336
Query: 209 G----------GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G C C + GH A+DC A +C NCG H AR+C K
Sbjct: 337 EHKAADCPNPRSAEGVECKRCNEMGHFAKDCHQAPAPR--TCRNCGSEDHMARDCDK 391
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 39/100 (39%), Gaps = 14/100 (14%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
N C NCG HFAR+CP + G CF CG G +C G
Sbjct: 69 NDNKCRNCGGDGHFARECPAPRKGM--------ACFNCGEEGRSKAECTKPRVFKGP--- 117
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C K GH A +C C NC GH ECT+
Sbjct: 118 CRICSKEGHPAAECPDRPP---DVCKNCQSEGHKTIECTE 154
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C NC H+AR+C R S C NC + HF+RDCP+++ S
Sbjct: 370 APAPRTCRNCGSEDHMARDCDKPRDASIVT-----CRNCEEVGHFSRDCPQKKDWSKVKC 424
Query: 185 NNSGGCFKCGG-------------YGHLARDCITRGSGGGGGG 214
NN G + GH + C+ S G G G
Sbjct: 425 NNCGESEQSAKDARHKGQMLTNVTVGHTIKRCLQAASEGFGQG 467
>gi|419333596|ref|ZP_13875146.1| cold shock protein CspG [Escherichia coli DEC12D]
gi|378187994|gb|EHX48603.1| cold shock protein CspG [Escherichia coli DEC12D]
Length = 70
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ E G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQEQRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|159125542|gb|EDP50659.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus A1163]
Length = 509
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C NC+ GH AR+CT R + + PEH A DCP N +
Sbjct: 312 VKCVNCNASGHRARDCTEPRVDRS-------------PEHKAADCP------NPRSAEGV 352
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C +C GH A+DC C NCG H+ARDC +C NC + GH
Sbjct: 353 ECKRCNEMGHFAKDC----HQAPAPRTCRNCGSEDHMARDCDKPRDASIVTCRNCEEVGH 408
Query: 249 FARECTK 255
F+R+C +
Sbjct: 409 FSRDCPQ 415
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ +GH A++C + C NCG +H ARDC + + S
Sbjct: 351 GVECKRCNEMGHFAKDC-------HQAPAPRTCRNCGSEDHMARDCDKPRDAS------I 397
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C C GH +RDC + +C NCG+S A+D A G G
Sbjct: 398 VTCRNCEEVGHFSRDCPQKKD--WSKVKCNNCGESEQSAKD-----ARHKGQMLTNVTVG 450
Query: 248 HFARECTKVAN 258
H + C + A+
Sbjct: 451 HTIKRCLQAAS 461
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 46/117 (39%), Gaps = 19/117 (16%)
Query: 153 YNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC----ITRGS 208
Y+ C NCG+ H AR C ++ + C C GH ARDC + R
Sbjct: 280 YDKQIPKCGNCGEMGHTARGCKEERALVDRV---EVKCVNCNASGHRARDCTEPRVDRSP 336
Query: 209 G----------GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G C C + GH A+DC A +C NCG H AR+C K
Sbjct: 337 EHKAADCPNPRSAEGVECKRCNEMGHFAKDCHQAPAPR--TCRNCGSEDHMARDCDK 391
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 39/100 (39%), Gaps = 14/100 (14%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR 215
N C NCG HFAR+CP + G CF CG G +C G
Sbjct: 69 NGNKCRNCGGDGHFARECPAPRKGM--------ACFNCGEEGRSKAECTKPRVFKGP--- 117
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C C K GH A +C C NC GH ECT+
Sbjct: 118 CRICSKEGHPAAECPDRPP---DVCKNCQSEGHKTIECTE 154
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P C NC H+AR+C R S C NC + HF+RDCP+++ S
Sbjct: 370 APAPRTCRNCGSEDHMARDCDKPRDASIVT-----CRNCEEVGHFSRDCPQKKDWSKVKC 424
Query: 185 NNSGGCFKCGG-------------YGHLARDCITRGSGGGGGG 214
NN G + GH + C+ S G G G
Sbjct: 425 NNCGESEQSAKDARHKGQMLTNVTVGHTIKRCLQAASEGFGQG 467
>gi|50304733|ref|XP_452322.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641455|emb|CAH01173.1| KLLA0C02805p [Kluyveromyces lactis]
Length = 156
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG---GCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
CYNCDG GH++REC +R N N SG CY CG P H A+DC + +
Sbjct: 67 CYNCDGFGHISRECDQPKRFRN-NERSGPKVSCYKCGGPNHIAKDCLKSE---------- 115
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
C+ CG GHL++DC G CYNC GH+A+DC +
Sbjct: 116 PTCYNCGQAGHLSKDC----QNGENEKVCYNCNGVGHIAKDCSS 155
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 24/127 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG-- 188
CYNC GHV ECT + CYNC H +R+C + + N N SG
Sbjct: 49 CYNCGETGHVKTECTVQK-----------CYNCDGFGHISRECDQPKRFRN--NERSGPK 95
Query: 189 -GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+KCGG H+A+DC+ CYNCG++GHL++DC G C+NC G
Sbjct: 96 VSCYKCGGPNHIAKDCLK------SEPTCYNCGQAGHLSKDCQNG--ENEKVCYNCNGVG 147
Query: 248 HFARECT 254
H A++C+
Sbjct: 148 HIAKDCS 154
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC+ GHV ECT + CYNCG+ H +C Q+
Sbjct: 24 LCYNCNKPGHVQSECTVPK-----TVEFKQCYNCGETGHVKTECTVQK------------ 66
Query: 190 CFKCGGYGHLARDC-----ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
C+ C G+GH++R+C G CY CG H+A+DC +C+NCG
Sbjct: 67 CYNCDGFGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDC----LKSEPTCYNCG 122
Query: 245 KPGHFAREC 253
+ GH +++C
Sbjct: 123 QAGHLSKDC 131
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 35/138 (25%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYN 184
G CY C +GH+A +C S + CYNC P H +C P+ YN
Sbjct: 2 SGKACYICGKLGHLASDCDSEKL----------CYNCNKPGHVQSECTVPKTVEFKQCYN 51
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG-------AGGG 237
CG GH+ +C + +CYNC GH++R+C +G
Sbjct: 52 --------CGETGHVKTECTVQ--------KCYNCDGFGHISRECDQPKRFRNNERSGPK 95
Query: 238 GSCFNCGKPGHFARECTK 255
SC+ CG P H A++C K
Sbjct: 96 VSCYKCGGPNHIAKDCLK 113
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 105 GFGGYWKGNNDSRR-NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNC 163
GFG + + +R N GP V CY C G H+A++C + CYNC
Sbjct: 72 GFGHISRECDQPKRFRNNERSGPK-VSCYKCGGPNHIAKDCLKSEPT---------CYNC 121
Query: 164 GDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
G H ++DC Q G N C+ C G GH+A+DC
Sbjct: 122 GQAGHLSKDC---QNGE-----NEKVCYNCNGVGHIAKDC 153
>gi|331004967|ref|ZP_08328377.1| Cold shock protein [gamma proteobacterium IMCC1989]
gi|330421209|gb|EGG95465.1| Cold shock protein [gamma proteobacterium IMCC1989]
Length = 98
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 36/52 (69%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ AKGYGFI PDDGG DLF H SI+ DGY+TL Q V FD
Sbjct: 1 MATGTVKWFNNAKGYGFILPDDGGEDLFAHYSSIEMDGYKTLKAGQPVSFDT 52
>gi|116197647|ref|XP_001224635.1| hypothetical protein CHGG_06979 [Chaetomium globosum CBS 148.51]
gi|88178258|gb|EAQ85726.1| hypothetical protein CHGG_06979 [Chaetomium globosum CBS 148.51]
Length = 446
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 114 NDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDP------ 166
N R ++ G GG+ C NCDG+GH+++ C ++ N C+NC +P
Sbjct: 253 NIERLSDAGEVVYGGLPKCSNCDGLGHISKSCPQDKV-EKANTFEILCFNCNEPGHRVRD 311
Query: 167 -EHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHL 225
HF+RDCP QGG GC CG GH++RDC +C NC + GH+
Sbjct: 312 SGHFSRDCP--QGG-------PSGCRNCGQEGHMSRDCTE--PRNMALVQCRNCDEFGHM 360
Query: 226 ARDCGAGGAGGGGSCFNCGKPGHFAREC 253
++C C NC + GH+ C
Sbjct: 361 NKECPKPRDMARVKCANCQEMGHYKSRC 388
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 24/99 (24%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NC H ++ CP Q N CF C GH RD
Sbjct: 271 CSNCDGLGHISKSCP--QDKVEKANTFEILCFNCNEPGHRVRD----------------- 311
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
SGH +RDC GG G C NCG+ GH +R+CT+ N
Sbjct: 312 --SGHFSRDCPQGGPSG---CRNCGQEGHMSRDCTEPRN 345
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 23/111 (20%)
Query: 119 NNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
N G G G C+NC GH +C + R SG C C + H+++DCP
Sbjct: 49 NEGAGNTGGDRACFNCGESGHNKADCPNPRV------LSGACRRCNEEGHWSKDCP---- 98
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
N C +C H+ +DC R C NC ++GH C
Sbjct: 99 -----NAPPMLCKECQSPDHVVKDCPDRV--------CKNCRETGHTISQC 136
>gi|345562029|gb|EGX45101.1| hypothetical protein AOL_s00173g202 [Arthrobotrys oligospora ATCC
24927]
Length = 549
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 113 NNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNN-NSGGCYNCGDPEHFA 170
+N SR N G V CYNC GHV+R C R+ + ++ S C NC H A
Sbjct: 276 DNMSRLENAGFVQESYVPWCYNCKETGHVSRACPQERQARDPSDIPSIKCVNCDQEGHRA 335
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
RDCP ++ N C CG GH A++C +C C K GH ++DC
Sbjct: 336 RDCPEER----KQRRNPNACRNCGEEGHEAKEC--EKPRDASNVQCRKCEKMGHFSKDCP 389
Query: 231 AGGAGGGGSCFNCGKPGHFARECTK 255
+C NC + GH A EC +
Sbjct: 390 DAPK---MTCRNCDQEGHRAAECPE 411
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ C NCD GH AR+C R+ N C NCG+ H A++C + + SN
Sbjct: 323 IKCVNCDQEGHRARDCPEERKQ---RRNPNACRNCGEEGHEAKECEKPRDASNVQ----- 374
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH ++DC C NC + GH A +C G +C NCG+ GH
Sbjct: 375 -CRKCEKMGHFSKDC-----PDAPKMTCRNCDQEGHRAAECPE--PKKGMTCNNCGEEGH 426
Query: 249 FARECT 254
+CT
Sbjct: 427 RRVDCT 432
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ C NCD GH A EC ++ C NCG+ H DC N
Sbjct: 394 MTCRNCDQEGHRAAECPEPKKGMT-------CNNCGEEGHRRVDC---------TNPRKI 437
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C C GH+ RDC +C NC + GH A++C C CG+ GH
Sbjct: 438 ICNNCDEEGHVGRDCPK--PRDPARVKCRNCDEMGHSAKECPKPRDMSRIKCNECGEMGH 495
Query: 249 FARECT 254
++R CT
Sbjct: 496 WSRNCT 501
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P ++C NCD GHV R+C R + C NC + H A++CP+ + S
Sbjct: 434 PRKIICNNCDEEGHVGRDCPKPRDPARVK-----CRNCDEMGHSAKECPKPRDMSRIK-- 486
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGG 214
C +CG GH +R+C +G+GG G
Sbjct: 487 ----CNECGEMGHWSRNCTNKGAGGDDDG 511
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 165 DPEHFARD----CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI----TRGSGGGGGGRC 216
DPE F D R + + C+ C GH++R C R +C
Sbjct: 266 DPERFPVDDNDNMSRLENAGFVQESYVPWCYNCKETGHVSRACPQERQARDPSDIPSIKC 325
Query: 217 YNCGKSGHLARDCGAGGAG--GGGSCFNCGKPGHFARECTK 255
NC + GH ARDC +C NCG+ GH A+EC K
Sbjct: 326 VNCDQEGHRARDCPEERKQRRNPNACRNCGEEGHEAKECEK 366
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 33/135 (24%)
Query: 122 GGYGPGGV--VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG 179
GG P G C C+ GH A EC + + C CG H A CP
Sbjct: 45 GGDRPRGAPGACRRCNEEGHFAAECPNQK-----------CSCCGQKGHSASKCP----- 88
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
+ C C GH+ +C + + C +CG++GH+ ++C
Sbjct: 89 -------TPKCNICNTEGHIPFECPQKDNQA-----CRHCGETGHMVKEC---PIRANEP 133
Query: 240 CFNCGKPGHFARECT 254
C NC + GH A ECT
Sbjct: 134 CRNCQQLGHRAAECT 148
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG--SNSY 183
P V C NCD +GH A+EC R S C CG+ H++R+C + G + +
Sbjct: 458 PARVKCRNCDEMGHSAKECPKPRDMSRIK-----CNECGEMGHWSRNCTNKGAGGDDDGF 512
Query: 184 NNNSGG 189
N SGG
Sbjct: 513 NATSGG 518
>gi|254210302|gb|AAO73520.2| cellular nucleic acid-binding protein [Danio rerio]
Length = 163
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CYNCG H ARDC + N
Sbjct: 59 ACYNCHRSGHISRDCKEPKKE-----REQCCYNCGKAGHVARDCD---------HANEQK 104
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH + C +CY CG+ GH+A C +C+NCGK GH
Sbjct: 105 CYSCGGFGHFQKLC--------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHL 153
Query: 250 ARECTKVAN 258
AR+C+ A+
Sbjct: 154 ARDCSIEAS 162
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + + C+ C GH++RDC + CYNC
Sbjct: 40 CYRCGEQGHIARDCEQTEDA----------CYNCHRSGHISRDC--KEPKKEREQCCYNC 87
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+ARDC C++CG GHF + C KV
Sbjct: 88 GKAGHVARDCDHANEQ---KCYSCGGFGHFQKLCDKV 121
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 26/96 (27%)
Query: 184 NNNSGGCFKCGGYGHLARDC------------------ITRGSGGGGGGR--------CY 217
+ ++ CF CG GH ++C R G R CY
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
NC +SGH++RDC C+NCGK GH AR+C
Sbjct: 62 NCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDC 97
>gi|91783753|ref|YP_558959.1| cold-shock DNA-binding protein family protein [Burkholderia
xenovorans LB400]
gi|187924184|ref|YP_001895826.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|385209459|ref|ZP_10036327.1| cold shock protein [Burkholderia sp. Ch1-1]
gi|91687707|gb|ABE30907.1| cold-shock DNA-binding protein family [Burkholderia xenovorans
LB400]
gi|187715378|gb|ACD16602.1| cold-shock DNA-binding domain protein [Burkholderia phytofirmans
PsJN]
gi|385181797|gb|EIF31073.1| cold shock protein [Burkholderia sp. Ch1-1]
Length = 67
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PDDGG DLF H I+S+G+++L ENQ V F+++ GK QA
Sbjct: 3 TGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIRSEGFKSLQENQKVSFEIKQGPKGK-QA 61
Query: 68 LDV 70
D+
Sbjct: 62 ADI 64
>gi|453380082|dbj|GAC85121.1| putative cold shock protein [Gordonia paraffinivorans NBRC
108238]
Length = 67
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDD GAD+FVH SI G+R L ENQ VEFDV+ G Q
Sbjct: 2 AQGTVKWFNGEKGFGFIAPDDQGADVFVHYSSINGSGFRNLEENQRVEFDVEQGQKGP-Q 60
Query: 67 ALDVTA 72
A +V+A
Sbjct: 61 ATNVSA 66
>gi|343925171|ref|ZP_08764701.1| putative cold shock protein [Gordonia alkanivorans NBRC 16433]
gi|404260776|ref|ZP_10964055.1| putative cold shock protein [Gordonia namibiensis NBRC 108229]
gi|409388070|ref|ZP_11240088.1| putative cold shock protein [Gordonia rubripertincta NBRC 101908]
gi|343764912|dbj|GAA11627.1| putative cold shock protein [Gordonia alkanivorans NBRC 16433]
gi|403201720|dbj|GAB83322.1| putative cold shock protein [Gordonia rubripertincta NBRC 101908]
gi|403400797|dbj|GAC02465.1| putative cold shock protein [Gordonia namibiensis NBRC 108229]
Length = 67
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDD GAD+FVH SI G+R L ENQ VEFDV+ G Q
Sbjct: 2 AQGTVKWFNGEKGFGFIAPDDQGADVFVHYSSITGSGFRNLEENQRVEFDVEQGQKGP-Q 60
Query: 67 ALDVTA 72
A +V+A
Sbjct: 61 ATNVSA 66
>gi|219119929|ref|XP_002180715.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408188|gb|EEC48123.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 71
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WFD KG+GFI PDDG D+FVHQ S+ S+G+R+L E + VEF ++ + G+ A
Sbjct: 9 GTVKWFDVKKGFGFIVPDDGSEDVFVHQTSVHSEGFRSLAEGEPVEFSIKEDDRGRKSAE 68
Query: 69 DVT 71
VT
Sbjct: 69 RVT 71
>gi|71027909|ref|XP_763598.1| cold shock protein [Theileria parva strain Muguga]
gi|68350551|gb|EAN31315.1| cold shock protein, putative [Theileria parva]
Length = 94
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TR G WF+ KGYGFI ++G D+FVHQ I +DG+R+L EN+ VE +V ++ +
Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLRENEKVELEVIMDNNR 59
Query: 64 KYQALDVTAPGGAPVHSSKNNNTNNNSGYNN 94
K +A+ VT P G+ V + ++ NNN +N+
Sbjct: 60 K-KAIHVTGPNGSHVTGTNSHYGNNNDKFND 89
>gi|255587236|ref|XP_002534193.1| cold shock domain containing proteins, putative [Ricinus
communis]
gi|390567442|ref|ZP_10247780.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|390568664|ref|ZP_10248963.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|420251213|ref|ZP_14754398.1| cold shock protein [Burkholderia sp. BT03]
gi|223525720|gb|EEF28187.1| cold shock domain containing proteins, putative [Ricinus
communis]
gi|389939433|gb|EIN01263.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|389940633|gb|EIN02424.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|398058293|gb|EJL50192.1| cold shock protein [Burkholderia sp. BT03]
Length = 67
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PD+GG DLF H IK++G+++L ENQ V F+V++ GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDEGGEDLFAHFSEIKTEGFKSLQENQKVSFEVKMGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|289540929|gb|ADD09600.1| zinc knuckle (ccHc-type) family protein [Trifolium repens]
Length = 256
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+NC GH+A EC++ C+NC +P H A CP
Sbjct: 61 PNVAVCHNCGLPGHIASECSTK----------SVCWNCKEPGHMANSCP----------- 99
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH AR+C G C+NC K GH+A +C A C NC K
Sbjct: 100 NEGICHTCGKTGHRARECSAPSMPPGDLRLCHNCYKQGHIAVECTNEKA-----CNNCRK 154
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 155 TGHLARDC 162
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
RR++ G+ + C NC GH AREC N C+NCG P H A +C
Sbjct: 34 RRDSSRGFSRDNL-CKNCKRPGHYARECP----------NVAVCHNCGLPGHIASEC--- 79
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ C+ C GH+A C G C+ CGK+GH AR+C A
Sbjct: 80 --------STKSVCWNCKEPGHMANSCPNEGI-------CHTCGKTGHRARECSAPSMPP 124
Query: 237 GGS--CFNCGKPGHFARECT 254
G C NC K GH A ECT
Sbjct: 125 GDLRLCHNCYKQGHIAVECT 144
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 62/159 (38%), Gaps = 41/159 (25%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C+NC GH+A ECT N C NC H
Sbjct: 109 KTGHRARECSAPSMPPGDLRLCHNCYKQGHIAVECT----------NEKACNNCRKTGHL 158
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG--------------- 214
ARDCP N C C GH+AR C G G
Sbjct: 159 ARDCP-----------NDPICNVCNVSGHVARQCPKSNVIGDHSGRGSFRGAGGGGYRDV 207
Query: 215 RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C NC + GH++RDC G C NCG GH A EC
Sbjct: 208 MCRNCQQLGHMSRDC----MGPLMICHNCGGRGHLAYEC 242
>gi|170053777|ref|XP_001862831.1| RNA-binding protein lin-28 [Culex quinquefasciatus]
gi|167874140|gb|EDS37523.1| RNA-binding protein lin-28 [Culex quinquefasciatus]
Length = 181
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 44/171 (25%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+R G WF+ KG+GFI PDDGG D+FVHQ ++ DG+R+L +N+ VEF+ +L D
Sbjct: 22 SRRAGHCKWFNVIKGWGFITPDDGGQDVFVHQSVLQMDGFRSLGQNEPVEFECKL-TDKG 80
Query: 65 YQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGY 124
Y+A V P G+ F K R
Sbjct: 81 YEATRVFGPSQT-----------------------QCKGSEFRPRAKRKYRKMR------ 111
Query: 125 GPGGVVCYNC-DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
CYNC + H+A+ C C++C +H DCP
Sbjct: 112 ------CYNCGEFANHIAQMCAQGPLPKR-------CHHCKSEDHLVVDCP 149
>gi|161502877|ref|YP_001569989.1| hypothetical protein SARI_00934 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160864224|gb|ABX20847.1| hypothetical protein SARI_00934 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 70
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V+ G
Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFRTLNENQEVEFSVEQGPKGP 62
Query: 65 YQALDVTA 72
A+DV A
Sbjct: 63 -SAVDVVA 69
>gi|443308394|ref|ZP_21038180.1| cold-shock DNA-binding protein family protein [Mycobacterium sp.
H4Y]
gi|442763510|gb|ELR81509.1| cold-shock DNA-binding protein family protein [Mycobacterium sp.
H4Y]
Length = 67
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDDG AD+FVH I+ GYRTL ENQ V+F+V A G Q
Sbjct: 2 TQGTVKWFNGEKGFGFIAPDDGSADVFVHYSEIQGGGYRTLEENQRVQFEVGQGAKGP-Q 60
Query: 67 ALDVTA 72
A VTA
Sbjct: 61 ATGVTA 66
>gi|294636209|ref|ZP_06714624.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
gi|291090490|gb|EFE23051.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
Length = 97
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+++ TG+V WF+ +KG+GFI P DG D+FVH +I+SDG++TL E Q VEF +Q
Sbjct: 29 MSKKTGQVKWFNESKGFGFITPADGSKDVFVHFSAIQSDGFKTLAEGQQVEFSIQ 83
>gi|348540577|ref|XP_003457764.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oreochromis niloticus]
Length = 161
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 103 GAGFGGYWKGNNDSRRNNGGGYGPGG--VVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G+W N S G G + CY C +GHVAR+C C
Sbjct: 8 GCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDC---------ERTEDAC 58
Query: 161 YNCGDPEHFARDC--PRQQGGSNSYNNNSGG-------------CFKCGGYGHLARDCIT 205
YNCG +H +RDC P+++ YN G C+ CG +GH+ + C
Sbjct: 59 YNCGREDHISRDCKEPKKEREQLCYNCGKAGHMARNCNHAHEQKCYSCGSFGHIQKCC-- 116
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CY CG+ GH+A C +C+N GK GH A+ECT A
Sbjct: 117 ------EKVKCYRCGEIGHVAVHCSKASEL---NCYNYGKSGHLAKECTIEAT 160
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG--CFKCGGYGHLARDCITRGSGGGGG 213
+S C+ CG H+ ++CP G C++CG GH+ARDC
Sbjct: 2 SSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTEDA---- 57
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ H++RDC C+NCGK GH AR C
Sbjct: 58 --CYNCGREDHISRDCKEPKKEREQLCYNCGKAGHMARNC 95
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG---CYNCGDPEHFARDCPRQQGGSNSYNNNS 187
C+ C GH + C S R G CY CG+ H ARDC R +
Sbjct: 6 CFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTEDA-------- 57
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG H++RDC + CYNCGK+GH+AR+C C++CG G
Sbjct: 58 --CYNCGREDHISRDC--KEPKKEREQLCYNCGKAGHMARNCNHAHE---QKCYSCGSFG 110
Query: 248 HFARECTKV 256
H + C KV
Sbjct: 111 HIQKCCEKV 119
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGHLARDCGAGGAGGGGS 239
+S CF CG GH ++C + G G G G CY CG+ GH+ARDC +
Sbjct: 2 SSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDC----ERTEDA 57
Query: 240 CFNCGKPGHFARECTK 255
C+NCG+ H +R+C +
Sbjct: 58 CYNCGREDHISRDCKE 73
>gi|322710166|gb|EFZ01741.1| hypothetical protein MAA_02970 [Metarhizium anisopliae ARSEF 23]
Length = 452
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
+ C NC G GH R+C R + C NCG H A DC N ++
Sbjct: 273 AISCSNCGGEGHRIRDCPEPRVDK------FACRNCGKSGHRASDC------EEPPNLDN 320
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C KCG GH+ +DC GG C NCG+ GH+A++C +C NC K G
Sbjct: 321 MECRKCGEKGHMGKDCPQ-----GGSRACRNCGQEGHMAKECDQPRNMDNVTCRNCEKTG 375
Query: 248 HFARECTK 255
HF+R+C +
Sbjct: 376 HFSRDCPE 383
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC +GH ++ CT + + C NCG H RDCP + + C
Sbjct: 248 CHNCGELGHSSKFCTQEKVEKKAQP-AISCSNCGGEGHRIRDCPEPRV-------DKFAC 299
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
CG GH A DC C CG+ GH+ +DC GG+ +C NCG+ GH A
Sbjct: 300 RNCGKSGHRASDC--EEPPNLDNMECRKCGEKGHMGKDCPQGGSR---ACRNCGQEGHMA 354
Query: 251 RECTKVAN 258
+EC + N
Sbjct: 355 KECDQPRN 362
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 150 NSNYNNNSGGCYNCGDPEHFARDCPRQ--QGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
+S +N C C H +CP Q + G++ NN CF CG GH A DC T
Sbjct: 18 DSGWNQPQVKCGACSQEGHEEANCPNQHTEAGNDDANNK---CFNCGETGHRAADCPTPR 74
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C C K GH+ RDC C NCG+ GH + C
Sbjct: 75 DTA-----CRYCKKEGHMIRDCPDKPPM---VCDNCGQEGHMRKNC 112
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 120 NGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG 179
N G+ V C C GH C + + ++ + C+NCG+ H A DCP +
Sbjct: 17 NDSGWNQPQVKCGACSQEGHEEANCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDT 76
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ Y C GH+ RDC + C NCG+ GH+ ++C
Sbjct: 77 ACRY---------CKKEGHMIRDCPDKPPMV-----CDNCGQEGHMRKNC 112
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC GH+A+EC R N C NC HF+RDCP + S
Sbjct: 340 GSRACRNCGQEGHMAKECDQPRNMDNVT-----CRNCEKTGHFSRDCPEPKDWSKVQ--- 391
Query: 187 SGGCFKCGGYGHLARDC 203
C C +GH C
Sbjct: 392 ---CSNCQKFGHTKVRC 405
>gi|451964839|ref|ZP_21918101.1| cold shock-like protein CspC [Edwardsiella tarda NBRC 105688]
gi|451316416|dbj|GAC63463.1| cold shock-like protein CspC [Edwardsiella tarda NBRC 105688]
Length = 69
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ TG+V WF+ +KG+GFI P DG D+FVH +I+SDG++TL E Q VEF +Q G
Sbjct: 1 MSKKTGQVKWFNESKGFGFITPADGSKDVFVHFSAIQSDGFKTLAEGQQVEFSIQDSPRG 60
Query: 64 KYQALDVTA 72
A DV A
Sbjct: 61 P-AAADVVA 68
>gi|145347619|ref|XP_001418260.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578489|gb|ABO96553.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 106
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
TR+ GKV WF+ KG+GFI P DG ++FVHQ I G+R+++E + VE+DV + D
Sbjct: 3 TRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVD-DTDFA 61
Query: 65 YQALDVTAPGGAPV 78
+A++VT P G V
Sbjct: 62 PKAVNVTGPDGVAV 75
>gi|189524881|ref|XP_001922882.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Danio
rerio]
gi|189524883|ref|XP_001922883.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Danio
rerio]
gi|326671493|ref|XP_003199446.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
gi|326671495|ref|XP_003199447.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
Length = 161
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 103 GAGFGGYWKGN--NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G+W N N R G + CY C GHVAR+C C
Sbjct: 8 GCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDC---------ERTEDAC 58
Query: 161 YNCGDPEHFARDC--PRQQGGSNSYN-------------NNSGGCFKCGGYGHLARDCIT 205
YNCG H +RDC P+++ YN N C+ CGG+GH+ + C
Sbjct: 59 YNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGC-- 116
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CY CG+ GH+A C +C+NCGK GH A+ECT A
Sbjct: 117 ------EKVKCYRCGEIGHVAVQCSKASEV---NCYNCGKSGHVAKECTIEAT 160
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG--CFKCGGYGHLARDCITRGSGGGGG 213
+S C+ CG H+ ++CP G C++CG GH+ARDC
Sbjct: 2 SSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTEDA---- 57
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ GH++RDC C+NCGK GH AR+C
Sbjct: 58 --CYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDC 95
>gi|170031591|ref|XP_001843668.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870496|gb|EDS33879.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 160
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+ +GH AR+C + CY C H AR+C S + + C
Sbjct: 53 CYKCNQMGHFARDCKEDL---------DRCYRCNGSGHIAREC--------SLSPDDSCC 95
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ C GHLAR+C + S CYNC KSGH++R+C G SC++CGK GH +
Sbjct: 96 YNCNQSGHLARNCPEK-SDRDLNVSCYNCNKSGHISRNCPTGDK----SCYSCGKIGHLS 150
Query: 251 RECTK 255
R+CT+
Sbjct: 151 RDCTE 155
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 51/128 (39%), Gaps = 34/128 (26%)
Query: 160 CYNCGDPEHFARDCP-----------------RQQGGSNSYNNNSGGCFKCGGYGHLARD 202
C+ C P H+ARDC ++ C+KC GH ARD
Sbjct: 6 CFKCDRPGHYARDCQNVGGGGGGGRPGGPRGGGERREFGGGGGRREKCYKCNQMGHFARD 65
Query: 203 C------ITRGSGGGGGGR----------CYNCGKSGHLARDCGA-GGAGGGGSCFNCGK 245
C R +G G R CYNC +SGHLAR+C SC+NC K
Sbjct: 66 CKEDLDRCYRCNGSGHIARECSLSPDDSCCYNCNQSGHLARNCPEKSDRDLNVSCYNCNK 125
Query: 246 PGHFAREC 253
GH +R C
Sbjct: 126 SGHISRNC 133
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 35/86 (40%), Gaps = 25/86 (29%)
Query: 190 CFKCGGYGHLARDC---------------------ITRGSGGGGGGRCYNCGKSGHLARD 228
CFKC GH ARDC G GGG +CY C + GH ARD
Sbjct: 6 CFKCDRPGHYARDCQNVGGGGGGGRPGGPRGGGERREFGGGGGRREKCYKCNQMGHFARD 65
Query: 229 CGAGGAGGGGSCFNCGKPGHFARECT 254
C C+ C GH AREC+
Sbjct: 66 CKE----DLDRCYRCNGSGHIARECS 87
>gi|317492161|ref|ZP_07950591.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|365837378|ref|ZP_09378747.1| cold shock-like protein CspE [Hafnia alvei ATCC 51873]
gi|316919866|gb|EFV41195.1| cold-shock' DNA-binding domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|364562110|gb|EHM39980.1| cold shock-like protein CspE [Hafnia alvei ATCC 51873]
Length = 69
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ TG V WF+ +KG+GFI P DG D+FVH +IKSDG++TL E Q VEF +Q G
Sbjct: 1 MSKKTGHVKWFNESKGFGFITPADGSKDVFVHFSAIKSDGFKTLAEGQQVEFAIQDSPRG 60
Query: 64 KYQALDVTA 72
A DV A
Sbjct: 61 P-SAADVIA 68
>gi|154288428|ref|XP_001545009.1| hypothetical protein HCAG_02056 [Ajellomyces capsulatus NAm1]
gi|150408650|gb|EDN04191.1| hypothetical protein HCAG_02056 [Ajellomyces capsulatus NAm1]
Length = 191
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 63/154 (40%), Gaps = 33/154 (21%)
Query: 125 GPGGVVCYNCDGVGHVARECTS-----------NRRNSNYNNNSGGCYNCGDPEHFARDC 173
P CY C GH++R+CTS CY CG H AR+C
Sbjct: 44 APKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNC 103
Query: 174 PRQQGGSNSYNN--------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
+ G + C+ CGGYGH+ARDC G +CYNC
Sbjct: 104 SQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQ-------GQKCYNC 156
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G+ GH++RDC A G C+ C +PGH C
Sbjct: 157 GEVGHVSRDCPT-EAKGERVCYKCKQPGHVQATC 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 40/145 (27%)
Query: 142 RECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG----------CF 191
RECT+ + CY CG H +RDC G + N+ C+
Sbjct: 39 RECTAAPKEKT-------CYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECY 91
Query: 192 KCGGYGHLARDCITRGSGGGGGG------------------RCYNCGKSGHLARDCGAGG 233
KCG GH+AR+C G G GG CY+CG GH+ARDC
Sbjct: 92 KCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQ-- 149
Query: 234 AGGGGSCFNCGKPGHFARECTKVAN 258
G C+NCG+ GH +R+C A
Sbjct: 150 ---GQKCYNCGEVGHVSRDCPTEAK 171
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 44/148 (29%)
Query: 152 NYNNNSGGCYNCGDPEH-------FARDCPRQQ---GGSNSYNNNSGGCFKCGGYGHLAR 201
+Y + GC+NCGD H PR++ G + C++CG GH++R
Sbjct: 2 DYQSGGRGCFNCGDAAHQVNMFCALLVIAPRRELLPGRECTAAPKEKTCYRCGQAGHISR 61
Query: 202 DCITRGSG--------------GGGGGRCYNCGKSGHLARDCGAGGAGGGG--------- 238
DC + GSG GG CY CG+ GH+AR+C G G G
Sbjct: 62 DCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGYGSGGYGGATGGG 121
Query: 239 -----------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 122 YSGGYGGGRQQTCYSCGGYGHMARDCTQ 149
>gi|156337146|ref|XP_001619808.1| hypothetical protein NEMVEDRAFT_v1g782 [Nematostella vectensis]
gi|156203704|gb|EDO27708.1| predicted protein [Nematostella vectensis]
Length = 624
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 17/102 (16%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C CG+ HFARDCP+ GG S C KC GH AR+C + GG +C+ C
Sbjct: 36 CRKCGESGHFARDCPQGGGG------GSRTCHKCNEEGHFAREC---PNADSGGNKCFKC 86
Query: 220 GKSGHLARDC--------GAGGAGGGGSCFNCGKPGHFAREC 253
+SGH AR+C G GG G +C+ C + GHFAREC
Sbjct: 87 NESGHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFAREC 128
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 65/147 (44%), Gaps = 44/147 (29%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCPRQQGGSNSYN 184
C C GH AR+C GG C+ C + HFAR+CP N
Sbjct: 36 CRKCGESGHFARDCPQ-----------GGGGGSRTCHKCNEEGHFARECP---------N 75
Query: 185 NNSGG--CFKCGGYGHLARDC------ITRGSGGGGGGRCYNCGKSGHLARDC------- 229
+SGG CFKC GH AR+C GG G CY C ++GH AR+C
Sbjct: 76 ADSGGNKCFKCNESGHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNG 135
Query: 230 ---GAGGAGGGGSCFNCGKPGHFAREC 253
G GG +CF C + GHFAREC
Sbjct: 136 GGFGGGGGSSDSTCFKCQQTGHFAREC 162
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCP--RQQGGSNS 182
G C+ C+ GH AREC N +SGG C+ C + HFAR+CP GG
Sbjct: 56 GSRTCHKCNEEGHFARECP--------NADSGGNKCFKCNESGHFARECPNSGGGGGGFG 107
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGS--------GGGGGGRCYNCGKSGHLARDCGAGGA 234
++ C+KC GH AR+C S GG C+ C ++GH AR+C A
Sbjct: 108 GGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQTGHFARECPNESA 167
Query: 235 GG 236
G
Sbjct: 168 AG 169
>gi|296130972|ref|YP_003638222.1| cold-shock protein [Cellulomonas flavigena DSM 20109]
gi|296022787|gb|ADG76023.1| cold-shock DNA-binding domain protein [Cellulomonas flavigena DSM
20109]
Length = 67
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ KG+GFI P+DGG D+FVH +I++ GYR+L ENQ V+FDVQ G QA
Sbjct: 3 TGIVKWFNAEKGFGFIAPEDGGPDVFVHYSAIQTQGYRSLEENQRVQFDVQAGPKGP-QA 61
Query: 68 LDVT 71
+VT
Sbjct: 62 SNVT 65
>gi|255586259|ref|XP_002533782.1| cold shock protein, putative [Ricinus communis]
gi|223526283|gb|EEF28595.1| cold shock protein, putative [Ricinus communis]
Length = 257
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R+ G + W+ KGYGFI+P+ GG D+FVH S+KS+G+ L +E++ + GK
Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168
Query: 66 QALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGG----AGFGGYWKGNN------- 114
QA++VTAP G + S+ S +N G G W G
Sbjct: 169 QAINVTAPKGKLLQDSRKVGCGVVSTKKSNMGASHLAKHSCVVAKSGAWHGTQLNYTLWE 228
Query: 115 -DSRRNNGGGYGPGGVVCYNCDGVGH 139
+R GG+ G CY C VGH
Sbjct: 229 ASTRFVKCGGWS-GFAWCYYCGKVGH 253
>gi|307729849|ref|YP_003907073.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. CCGE1003]
gi|323525902|ref|YP_004228055.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. CCGE1001]
gi|307584384|gb|ADN57782.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1003]
gi|323382904|gb|ADX54995.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1001]
Length = 67
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PDDGG DLF H I+++G+++L ENQ V F+V+ GK QA
Sbjct: 3 TGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIRAEGFKSLQENQKVSFEVKQGPKGK-QA 61
Query: 68 LDV 70
D+
Sbjct: 62 ADI 64
>gi|94499669|ref|ZP_01306206.1| Cold shock protein [Bermanella marisrubri]
gi|94428423|gb|EAT13396.1| Cold shock protein [Oceanobacter sp. RED65]
Length = 92
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TGKV WF+ AKGYGFI D+GG DLF H SI+ +GY+TL QSV+FD + G + A
Sbjct: 3 TGKVKWFNNAKGYGFILSDEGGEDLFAHYSSIQVEGYKTLKAGQSVQFDTKPSDQGTH-A 61
Query: 68 LDVTAPGGAPVHSSKNNNTNNN 89
+++T + S+K +N N
Sbjct: 62 INITP---LDMLSAKKSNQEQN 80
>gi|310792827|gb|EFQ28288.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 454
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 57 VQLEADGKYQALDV----TAPGGAPVHSSKNNNTNNNSGYN-----NNRGGRGGGGAGFG 107
V+LE + Q + V T AP H++ + N + Y + R A +
Sbjct: 165 VELEKAFRGQEIGVYLIATERVLAPTHTNMDLQGNLDKKYTVQYRFSAHPDRQREKATWP 224
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPE 167
+ N + G C NC+ +GH+++ C + CYNCG+
Sbjct: 225 SSPEENMTRLEDAGEPVSRLLQKCINCNELGHISKSCPQEAMEKA--RITITCYNCGEEG 282
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
H RDCP + + C CG GH +C T G C C + GH +R
Sbjct: 283 HRVRDCP-------TPRVDKFACKNCGQSGHKVSEC-TEPRKAGDDVECNKCHEMGHFSR 334
Query: 228 DCGAGGAGGGGSCFNCGKPGHFARECTK 255
DC GG GGG +C NCG GH +REC +
Sbjct: 335 DCPQGGGGGGRACHNCGNEGHISRECPE 362
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
+ CYNC GH R+C + R + C NCG H +C PR+ G +
Sbjct: 273 ITCYNCGEEGHRVRDCPTPR------VDKFACKNCGQSGHKVSECTEPRKAG-------D 319
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C KC GH +RDC G GGG C+NCG GH++R+C C NC
Sbjct: 320 DVECNKCHEMGHFSRDCPQGGGGGGRA--CHNCGNEGHISRECPEPRK---IKCRNCDAD 374
Query: 247 GHFARECTKVAN 258
GH +++C K +
Sbjct: 375 GHLSKDCDKPVD 386
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C+NCG H DCP + G + G C CG GH RDC C
Sbjct: 33 ACFNCGQSGHNKADCPERPKGFD------GTCRACGQEGHSRRDC-----PDAPAMTCRI 81
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CG+ GH+ +DC A +C NC + GH EC
Sbjct: 82 CGEEGHIRKDCPQKPA---DACRNCLEEGHETVEC 113
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 19/102 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+NC GH +C + + G C CG H RDCP + +
Sbjct: 33 ACFNCGQSGHNKADCPERPKGFD-----GTCRACGQEGHSRRDCP---------DAPAMT 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
C CG GH+ +DC + + C NC + GH +C A
Sbjct: 79 CRICGEEGHIRKDCPQKPADA-----CRNCLEEGHETVECKA 115
>gi|451823005|ref|YP_007459279.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775805|gb|AGF46846.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 81
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD+GG ++F H SI+ DG+RTL E Q V F+V GK QA
Sbjct: 17 TGTVKWFNDAKGFGFITPDNGGEEIFAHFSSIQMDGFRTLKEGQKVSFEVIQGPKGK-QA 75
Query: 68 LDVTAP 73
L++T P
Sbjct: 76 LNITKP 81
>gi|309775820|ref|ZP_07670814.1| conserved domain protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308916358|gb|EFP62104.1| conserved domain protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 66
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STGKV WF+ KGYGFI DDG D+FVH SI+SDG+RTL E Q+V FDV +E+D Q
Sbjct: 2 STGKVKWFNAEKGYGFITSDDG-KDIFVHYSSIQSDGFRTLEEGQAVNFDV-VESDRGQQ 59
Query: 67 ALDVT 71
A +VT
Sbjct: 60 AANVT 64
>gi|440634656|gb|ELR04575.1| hypothetical protein GMDG_06859 [Geomyces destructans 20631-21]
Length = 224
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 71/160 (44%), Gaps = 46/160 (28%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC----------------- 173
CY+C G+GHV +C + R SG CY+CG H ARDC
Sbjct: 53 CYSCSGIGHVQADCPTLR----LAGTSGRCYSCGLLGHLARDCSAPPGVGGMGPGMGPGV 108
Query: 174 ------PR--------QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
PR Q+GG+ C KCG H ARDC + +C+ C
Sbjct: 109 GRGGFAPRGGFQGGLAQRGGAFQ-GPRPTTCHKCGERNHFARDCKAQAL------KCFAC 161
Query: 220 GKSGHLARDCGAGGAG----GGGSCFNCGKPGHFARECTK 255
GK GH++RDC A G G +C+ CG+ GH +R+C +
Sbjct: 162 GKFGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCPQ 201
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 65/164 (39%), Gaps = 52/164 (31%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C +GH A EC+S R CYNC P H + CP + +
Sbjct: 8 ACYKCGQIGHTANECSSAERL---------CYNCKQPGHESNGCPLPR------TTEAKQ 52
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA------------------ 231
C+ C G GH+ DC T G GRCY+CG GHLARDC A
Sbjct: 53 CYSCSGIGHVQADCPTL-RLAGTSGRCYSCGLLGHLARDCSAPPGVGGMGPGMGPGVGRG 111
Query: 232 -----GGAGGG-------------GSCFNCGKPGHFARECTKVA 257
GG GG +C CG+ HFAR+C A
Sbjct: 112 GFAPRGGFQGGLAQRGGAFQGPRPTTCHKCGERNHFARDCKAQA 155
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 96 RGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNN 155
RGG GG A GG ++G P C+ C H AR+C +
Sbjct: 116 RGGFQGGLAQRGGAFQG-------------PRPTTCHKCGERNHFARDCKAQALK----- 157
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC 203
C+ CG H +RDC GG N C++CG GH++RDC
Sbjct: 158 ----CFACGKFGHISRDCTAPNGG--PLNTAGKTCYQCGEAGHISRDC 199
>gi|209520011|ref|ZP_03268789.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|295676690|ref|YP_003605214.1| cold-shock protein [Burkholderia sp. CCGE1002]
gi|209499550|gb|EDZ99627.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|295436533|gb|ADG15703.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1002]
Length = 67
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PDDGG DLF H I+++G+++L ENQ V F+++ GK QA
Sbjct: 3 TGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIRTEGFKSLQENQKVSFEIKQGPKGK-QA 61
Query: 68 LDV 70
D+
Sbjct: 62 ADI 64
>gi|186473959|ref|YP_001861301.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phymatum STM815]
gi|184196291|gb|ACC74255.1| cold-shock DNA-binding domain protein [Burkholderia phymatum
STM815]
Length = 67
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDGG DLF H I+++G+++L ENQ V F+V++ GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIRTEGFKSLQENQKVSFEVKMGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|242035205|ref|XP_002464997.1| hypothetical protein SORBIDRAFT_01g030150 [Sorghum bicolor]
gi|241918851|gb|EER91995.1| hypothetical protein SORBIDRAFT_01g030150 [Sorghum bicolor]
Length = 261
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 58/127 (45%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AR+C S C+ CG P H A +C ++ G
Sbjct: 40 LCNNCKRPGHFARDCPS----------VAVCHTCGLPGHIAAEC-----------SSKGI 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C NCGKSGH+ARDC A G C NC KPG
Sbjct: 79 CWNCKEPGHMANSCPNEGI-------CRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPG 131
Query: 248 HFARECT 254
HF ECT
Sbjct: 132 HFREECT 138
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 60/161 (37%), Gaps = 39/161 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGGSN 181
+C NC GH+AR+CT+ C NC P HF +C RQ G
Sbjct: 97 ICRNCGKSGHIARDCTAP---PVPPGEVILCSNCYKPGHFREECTNEKACNNCRQSGHIA 153
Query: 182 SYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------------------C 216
N C C GHLAR+C G GG C
Sbjct: 154 RNCTNDPVCNLCNVAGHLARECPKSDKLGERGGPPPFRGVGAPFRGVGVPFRGGFSDVIC 213
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C + GH++RDC AG C NCG GH A EC V+
Sbjct: 214 RACNQIGHMSRDCMAGAFM---ICHNCGGRGHMAYECPSVS 251
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 59/141 (41%), Gaps = 29/141 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNR---------RNSNYNNNSGGCYNCGDPEHFARDC--P 174
P VC+ C GH+A EC+S +N N G C NCG H ARDC P
Sbjct: 55 PSVAVCHTCGLPGHIAAECSSKGICWNCKEPGHMANSCPNEGICRNCGKSGHIARDCTAP 114
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
G +N C+K GH +C + C NC +SGH+AR+C
Sbjct: 115 PVPPGEVILCSN---CYK---PGHFREECTNEKA-------CNNCRQSGHIARNC----- 156
Query: 235 GGGGSCFNCGKPGHFARECTK 255
C C GH AREC K
Sbjct: 157 TNDPVCNLCNVAGHLARECPK 177
>gi|161869773|ref|YP_001598941.1| transcriptional regulator [Neisseria meningitidis 053442]
gi|304387853|ref|ZP_07370027.1| cold shock transcription regulator protein [Neisseria
meningitidis ATCC 13091]
gi|385339797|ref|YP_005893669.1| putative transcriptional regulator [Neisseria meningitidis G2136]
gi|385342168|ref|YP_005896039.1| putative transcriptional regulator [Neisseria meningitidis
M01-240149]
gi|385851505|ref|YP_005898020.1| putative transcriptional regulator [Neisseria meningitidis
M04-240196]
gi|385853478|ref|YP_005899992.1| putative transcriptional regulator [Neisseria meningitidis
H44/76]
gi|385854968|ref|YP_005901481.1| putative transcriptional regulator [Neisseria meningitidis
M01-240355]
gi|385856985|ref|YP_005903497.1| putative transcriptional regulator [Neisseria meningitidis
NZ-05/33]
gi|416172318|ref|ZP_11608735.1| putative transcriptional regulator [Neisseria meningitidis
OX99.30304]
gi|416178577|ref|ZP_11610628.1| putative transcriptional regulator [Neisseria meningitidis M6190]
gi|416183669|ref|ZP_11612682.1| putative transcriptional regulator [Neisseria meningitidis
M13399]
gi|416188164|ref|ZP_11614633.1| putative transcriptional regulator [Neisseria meningitidis M0579]
gi|416192608|ref|ZP_11616714.1| putative transcriptional regulator [Neisseria meningitidis
ES14902]
gi|416197342|ref|ZP_11618552.1| putative transcriptional regulator [Neisseria meningitidis CU385]
gi|416205479|ref|ZP_11620570.1| putative transcriptional regulator [Neisseria meningitidis
961-5945]
gi|416213879|ref|ZP_11622572.1| putative transcriptional regulator [Neisseria meningitidis
M01-240013]
gi|161595326|gb|ABX72986.1| transcriptional regulator [Neisseria meningitidis 053442]
gi|304338118|gb|EFM04254.1| cold shock transcription regulator protein [Neisseria
meningitidis ATCC 13091]
gi|325129992|gb|EGC52787.1| putative transcriptional regulator [Neisseria meningitidis
OX99.30304]
gi|325132021|gb|EGC54719.1| putative transcriptional regulator [Neisseria meningitidis M6190]
gi|325134026|gb|EGC56681.1| putative transcriptional regulator [Neisseria meningitidis
M13399]
gi|325135947|gb|EGC58557.1| putative transcriptional regulator [Neisseria meningitidis M0579]
gi|325137775|gb|EGC60350.1| putative transcriptional regulator [Neisseria meningitidis
ES14902]
gi|325140014|gb|EGC62543.1| putative transcriptional regulator [Neisseria meningitidis CU385]
gi|325142116|gb|EGC64542.1| putative transcriptional regulator [Neisseria meningitidis
961-5945]
gi|325144132|gb|EGC66439.1| putative transcriptional regulator [Neisseria meningitidis
M01-240013]
gi|325198041|gb|ADY93497.1| putative transcriptional regulator [Neisseria meningitidis G2136]
gi|325200482|gb|ADY95937.1| putative transcriptional regulator [Neisseria meningitidis
H44/76]
gi|325202374|gb|ADY97828.1| putative transcriptional regulator [Neisseria meningitidis
M01-240149]
gi|325203909|gb|ADY99362.1| putative transcriptional regulator [Neisseria meningitidis
M01-240355]
gi|325206328|gb|ADZ01781.1| putative transcriptional regulator [Neisseria meningitidis
M04-240196]
gi|325207874|gb|ADZ03326.1| putative transcriptional regulator [Neisseria meningitidis
NZ-05/33]
Length = 80
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PD+GG DLF H +I +G++TL E Q V FDV GK Q
Sbjct: 15 ATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGK-Q 73
Query: 67 ALDVTA 72
A ++ A
Sbjct: 74 AANIQA 79
>gi|156065797|ref|XP_001598820.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980]
gi|154691768|gb|EDN91506.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 502
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G +C C +GH+++ CT S C+NC + H RDCP + +
Sbjct: 286 GVPLCSRCSELGHISKHCTQEVGESERVQVQ--CFNCSEIGHRVRDCPIPR-------ED 336
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C C GH ++DC G G C C + GH +RDC GG G GG C NC +P
Sbjct: 337 KFACRNCKKSGHSSKDCT--GPRSAEGVECKKCNEIGHFSRDCPTGGGGDGGVCRNCNQP 394
Query: 247 GHFARECT 254
GH ++ECT
Sbjct: 395 GHHSKECT 402
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C+NCG H +CP + CF C GH +C G C
Sbjct: 72 ACFNCGQEGHSKAECPEPP--------KARPCFNCSEEGHTKAECTNPAVPREFSGTCRI 123
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C + GH A DC + C NC + GH EC
Sbjct: 124 CEQQGHRASDCPSAPP---KLCNNCKEEGHSILEC 155
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 116 SRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPR 175
S ++ G GV C C+ +GH +R+C + + G C NC P H +++C
Sbjct: 349 SSKDCTGPRSAEGVECKKCNEIGHFSRDCP-----TGGGGDGGVCRNCNQPGHHSKEC-- 401
Query: 176 QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
N C C GH ++C +C NC + GH C
Sbjct: 402 -------TNERVIICRNCDAEGHTGKECPK--PRDYSRVQCQNCKQMGHTKVRC 446
>gi|99907876|gb|ABF68761.1| CNBP mutant S158A, partial [synthetic construct]
Length = 163
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 72/173 (41%), Gaps = 37/173 (21%)
Query: 103 GAGFGGYWKGN--NDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGC 160
G G G+W N N R G + CY C GH+AR+C C
Sbjct: 10 GCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------EQTEDAC 60
Query: 161 YNCGDPEHFARDC--PRQQGGSNSYN-------------NNSGGCFKCGGYGHLARDCIT 205
YNC H +RDC P+++ YN N C+ CGG+GH + C
Sbjct: 61 YNCHRSXHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLC-- 118
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CY CG+ GH+A C +C+NCGK GH AR+C A+
Sbjct: 119 ------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHLARDCAIEAS 162
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 26/96 (27%)
Query: 184 NNNSGGCFKCGGYGHLARDC------------------ITRGSGGGGGGR--------CY 217
+ ++ CF CG GH ++C R G R CY
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
NC +S H++RDC C+NCGK GH AR+C
Sbjct: 62 NCHRSXHISRDCKEPKKEREQCCYNCGKAGHVARDC 97
>gi|23004357|ref|ZP_00047730.1| COG1278: Cold shock proteins [Magnetospirillum magnetotacticum
MS-1]
Length = 67
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI P+DG AD+F H +I+S G+RTL ENQ VEFDV
Sbjct: 2 ATGTVKWFNSEKGYGFIAPEDGSADVFAHYSAIQSQGFRTLEENQRVEFDV 52
>gi|407920706|gb|EKG13888.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 347
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC G GH+ C R CY CG H +CP GG + C
Sbjct: 111 CYNCGGHGHIKVNCPEAPRGGGGQE----CYGCGQVGHRKSECPNGGGGGRA-------C 159
Query: 191 FKCGGYGHLARDCI--TRGSGGGGGGR-CYNCGKSGHLARDC-----GAGGAGGGGSCFN 242
+ CG YGH DC ++G GGGGR CYNCG+ GHL +C A G G CF
Sbjct: 160 YNCGQYGHRKADCPNPSQGDNSGGGGRPCYNCGEIGHLKSECTNPINPATGGGDDRLCFK 219
Query: 243 CGKPGHFARECTKVAN 258
C K GH AR+C N
Sbjct: 220 CHKVGHMARDCNFCPN 235
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CYNCG H +CP G C+ CG GH +C +GGGGG CY
Sbjct: 109 GSCYNCGGHGHIKVNCPEAPRGGGGQE-----CYGCGQVGHRKSECP---NGGGGGRACY 160
Query: 218 NCGKSGHLARDC-----GAGGAGGGGSCFNCGKPGHFARECTKVAN 258
NCG+ GH DC G GGG C+NCG+ GH ECT N
Sbjct: 161 NCGQYGHRKADCPNPSQGDNSGGGGRPCYNCGEIGHLKSECTNPIN 206
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 75/170 (44%), Gaps = 33/170 (19%)
Query: 99 RGGGGAG-FGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNS 157
RGGGG +G G+ S NGGG GG CYNC GH +C N + +NS
Sbjct: 129 RGGGGQECYGCGQVGHRKSECPNGGG---GGRACYNCGQYGHRKADCP----NPSQGDNS 181
Query: 158 GG----CYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----CFKCGGYGHLARDCITRGS 208
GG CYNCG+ H +C +N N +GG CFKC GH+ARDC
Sbjct: 182 GGGGRPCYNCGEIGHLKSEC------TNPINPATGGGDDRLCFKCHKVGHMARDC----- 230
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
C NC + GH +C +C C + GH + C K +
Sbjct: 231 -----NFCPNCEQEGHGFFECHLKKDYSKITCTVCKEKGHTKKRCPKAQD 275
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-SCFNCGKPGHFAREC 253
T G GG G CYNCG GH+ +C GGGG C+ CG+ GH EC
Sbjct: 100 TPAGGKGGDGSCYNCGGHGHIKVNCPEAPRGGGGQECYGCGQVGHRKSEC 149
>gi|156536895|ref|XP_001607266.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 2
[Nasonia vitripennis]
gi|156536897|ref|XP_001607260.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 1
[Nasonia vitripennis]
gi|345479376|ref|XP_003423939.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Nasonia
vitripennis]
Length = 155
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C+ GH AREC ++ CY C H A+DC QQG S C
Sbjct: 46 CFKCNQYGHFARECKEDQ---------DLCYRCNGVGHIAKDC--QQGPEMS-------C 87
Query: 191 FKCGGYGHLARDCITRG--SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
+ C GH+AR C G SG CY C K+GH+AR+C GGG +C+ C K GH
Sbjct: 88 YNCNKTGHMARSCPESGNDSGRFNMQSCYTCNKTGHIARNC---PEGGGKTCYICHKTGH 144
Query: 249 FARECTK 255
+REC +
Sbjct: 145 ISRECDQ 151
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 49/113 (43%), Gaps = 19/113 (16%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG----------CFKCGGYGHLARDCIT 205
+S CY C HFAR+CP+ + CFKC YGH AR+C
Sbjct: 2 SSSACYKCNRMGHFARECPQGGATGGRGGDRRDRDGGFGRGREKCFKCNQYGHFAREC-- 59
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CY C GH+A+DC G SC+NC K GH AR C + N
Sbjct: 60 ----KEDQDLCYRCNGVGHIAKDCQQGPEM---SCYNCNKTGHMARSCPESGN 105
>gi|169604969|ref|XP_001795905.1| hypothetical protein SNOG_05500 [Phaeosphaeria nodorum SN15]
gi|111065444|gb|EAT86564.1| hypothetical protein SNOG_05500 [Phaeosphaeria nodorum SN15]
Length = 458
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 91/245 (37%), Gaps = 25/245 (10%)
Query: 14 FDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRT-LYENQSVE--FDVQLEADGKYQALDV 70
FD +R DD G L ++ I ++ L N E VQL A + +
Sbjct: 175 FDLPGVETALREDDLGVYLIAKKQDIAANMTIVDLIGNAKRENVLSVQLSAKPRRAKM-- 232
Query: 71 TAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVV 130
G P +N + GY + G G G G+ + + PG V
Sbjct: 233 --AQGWPESPEQNLERLASCGYVEDIGVPLCGNCGELGHIRKHCKQEVPEEVSVQPG-VE 289
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C C GH AR+C R N C NC H +++CP + N C
Sbjct: 290 CVYCKEPGHRARDCPKER------INPFACKNCKQEGHNSKECPEPRSAENVE------C 337
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
KC GH ++DC C NC H+A++C C NC K GHF+
Sbjct: 338 RKCNETGHFSKDC-----PNVAKRTCRNCDSEDHVAKECPEPRNPEKQQCRNCEKFGHFS 392
Query: 251 RECTK 255
++C +
Sbjct: 393 KDCPE 397
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G +C NC +GH+ + C C C +P H ARDCP+++ N
Sbjct: 257 GVPLCGNCGELGHIRKHCKQEVPEEVSVQPGVECVYCKEPGHRARDCPKERI-------N 309
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C C GH +++C S C C ++GH ++DC +C NC
Sbjct: 310 PFACKNCKQEGHNSKECPEPRSAENV--ECRKCNETGHFSKDCPNVAKR---TCRNCDSE 364
Query: 247 GHFARECTKVAN 258
H A+EC + N
Sbjct: 365 DHVAKECPEPRN 376
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG--GSCFNCGKPG 247
C C GH AR+C + GGG G C+NCG+ GH DC G C +CG G
Sbjct: 40 CRICNQTGHFARECPDKPEGGGLTGECFNCGQVGHNKADCTNERVERPFNGICNSCGVEG 99
Query: 248 HFAREC 253
H AR C
Sbjct: 100 HSARTC 105
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C NCD HVA+EC R N C NC HF++DCP + S NN
Sbjct: 357 TCRNCDSEDHVAKECPEPR-----NPEKQQCRNCEKFGHFSKDCPEPKDWSKIQCNN--- 408
Query: 190 CFKCGGYGHLARDC 203
C +GH + C
Sbjct: 409 ---CQQFGHTIKRC 419
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C C+ GH AREC +G C+NCG H DC ++ +N G
Sbjct: 39 TCRICNQTGHFARECPDKPEGGGL---TGECFNCGQVGHNKADCTNER-VERPFN---GI 91
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C CG GH AR C T +C C + GH A DC
Sbjct: 92 CNSCGVEGHSARTCPT------NPMKCKLCDQEGHKALDC 125
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 216 CYNCGKSGHLARDCGAGGAGGG--GSCFNCGKPGHFARECT 254
C C ++GH AR+C GGG G CFNCG+ GH +CT
Sbjct: 40 CRICNQTGHFARECPDKPEGGGLTGECFNCGQVGHNKADCT 80
>gi|295658168|ref|XP_002789646.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283131|gb|EEH38697.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
Length = 190
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG----------CYNCGDPEHFARDCP 174
P CY C GH++R+CTS +Y + G CY CG H AR+C
Sbjct: 47 APKEKTCYRCGQGGHISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCS 106
Query: 175 R-----------QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
+ G N C+ CGG+GH+ARDC G +CYNCG+ G
Sbjct: 107 QGYSSGGYGSGAGGYGGGYGGNRQQTCYSCGGFGHMARDCTQ-------GQKCYNCGEVG 159
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
H++RDC G C+ C +PGH C
Sbjct: 160 HVSRDCPT-EVKGERVCYKCKQPGHVQAAC 188
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 45/148 (30%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
+Y + GC+NCGD H ARDCP++ G YN C++CG G
Sbjct: 2 DYQSGGRGCFNCGDASHQARDCPKK-GTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGG 60
Query: 198 HLARDCITRGSG-------------GGGGGRCYNCGKSGHLARDCGAGGAGGGG------ 238
H++RDC + GSG G CY CG+ GH+AR+C G + GG
Sbjct: 61 HISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSGAGG 120
Query: 239 -----------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 121 YGGGYGGNRQQTCYSCGGFGHMARDCTQ 148
>gi|225684876|gb|EEH23160.1| cellular nucleic acid-binding protein [Paracoccidioides
brasiliensis Pb03]
gi|226287748|gb|EEH43261.1| DNA-binding protein HEXBP [Paracoccidioides brasiliensis Pb18]
Length = 190
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG----------CYNCGDPEHFARDCP 174
P CY C GH++R+CTS +Y + G CY CG H AR+C
Sbjct: 47 APKEKTCYRCGQGGHISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCS 106
Query: 175 R-----------QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSG 223
+ G N C+ CGG+GH+ARDC G +CYNCG+ G
Sbjct: 107 QGYGSGGYGGGAGGYGGGYGGNRQQTCYSCGGFGHMARDCTQ-------GQKCYNCGEVG 159
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
H++RDC G C+ C +PGH C
Sbjct: 160 HVSRDCPT-EVKGERVCYKCKQPGHVQAAC 188
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 45/148 (30%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
+Y + GC+NCGD H ARDCP++ G YN C++CG G
Sbjct: 2 DYQSGGRGCFNCGDASHQARDCPKK-GTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGG 60
Query: 198 HLARDCITRGSG-------------GGGGGRCYNCGKSGHLARDCGAGGAGGGG------ 238
H++RDC + GSG G CY CG+ GH+AR+C G GG
Sbjct: 61 HISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGGAGG 120
Query: 239 -----------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 121 YGGGYGGNRQQTCYSCGGFGHMARDCTQ 148
>gi|330417907|ref|NP_001193408.1| zinc finger protein 9 [Bos taurus]
gi|296470847|tpg|DAA12962.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 171
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R CY CG P H ARDC RQ+
Sbjct: 67 ICYNCGKSGHIAKDCAEPKREGE-----RCCYTCGRPGHLARDCDRQE---------ERK 112
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GH+ + C +CY CG+ GH+A +C +C+ CG+ GH
Sbjct: 113 CYSCGKSGHIQKYCTQ--------VKCYRCGEIGHVAINCRKMNE---VNCYRCGESGHL 161
Query: 250 ARECTKVAN 258
REC AN
Sbjct: 162 TRECPIEAN 170
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSN------------SYNNNSGGCFKCGGYGHLARDC 203
+S C+ CG H+A C + G S C++CG +GH A+DC
Sbjct: 2 SSKECFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKDC 61
Query: 204 ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
CYNCGKSGH+A+DC G C+ CG+PGH AR+C +
Sbjct: 62 DLLDDI------CYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCDR 107
>gi|109131255|ref|XP_001096279.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Macaca mulatta]
gi|355757474|gb|EHH60999.1| Zinc finger CCHC domain-containing protein 13 [Macaca fascicularis]
Length = 170
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC GH+A++C +R + + CY CG H A DC Q+
Sbjct: 64 GNICYNCGRSGHIAKDCKEPKRERDQH-----CYTCGRLGHLACDCDHQK---------E 109
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C+ CG GH+ +DC +CY CG++GH+A +C +C+ CG+ G
Sbjct: 110 QKCYSCGKLGHIQKDC--------AQVKCYRCGETGHVAINCSKASQV---NCYRCGESG 158
Query: 248 HFARECTKVAN 258
H AREC A
Sbjct: 159 HLARECPSEAT 169
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 161 YNCGDPEHFARDCPRQQGGSN-----------SYNNNSGGCFKCGGYGHLARDCITRGSG 209
+ CG H+ R CPR G S S C++CG +GH A++C+ G+
Sbjct: 7 FACGRSGHWTRGCPRGGAGGQGGGGHGRGSQCSSTTLSYTCYRCGEFGHHAKNCVLLGNI 66
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+SGH+A+DC C+ CG+ GH A +C
Sbjct: 67 ------CYNCGRSGHIAKDCKEPKRERDQHCYTCGRLGHLACDC 104
>gi|296166503|ref|ZP_06848934.1| cold shock protein Csp [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898115|gb|EFG77690.1| cold shock protein Csp [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 67
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PD G AD+FVH I+ +GYR+L ENQ VEF+V+ A G Q
Sbjct: 2 TQGTVKWFNSEKGFGFIAPDGGAADVFVHYSEIQGNGYRSLEENQRVEFNVEQGAKGP-Q 60
Query: 67 ALDVTA 72
A+ VTA
Sbjct: 61 AVGVTA 66
>gi|238789312|ref|ZP_04633099.1| Cold shock-like protein cspE [Yersinia frederiksenii ATCC 33641]
gi|238722644|gb|EEQ14297.1| Cold shock-like protein cspE [Yersinia frederiksenii ATCC 33641]
Length = 84
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+++ TG+V WF+ AKG+GFI DGG D+FVH +I +DG++TL E Q VE+ +Q
Sbjct: 16 MSKKTGQVKWFNEAKGFGFIEQHDGGKDVFVHFSAIATDGFKTLAEGQRVEYTIQ 70
>gi|255065177|ref|ZP_05317032.1| cold shock transcription regulator protein [Neisseria sicca ATCC
29256]
gi|269214299|ref|ZP_06158484.1| cold shock transcription regulator protein [Neisseria lactamica
ATCC 23970]
gi|288575418|ref|ZP_05976942.2| cold shock transcription regulator protein [Neisseria mucosa ATCC
25996]
gi|297250909|ref|ZP_06865276.2| cold shock transcription regulator protein [Neisseria
polysaccharea ATCC 43768]
gi|340362444|ref|ZP_08684829.1| cold shock transcription regulator protein [Neisseria macacae
ATCC 33926]
gi|255050598|gb|EET46062.1| cold shock transcription regulator protein [Neisseria sicca ATCC
29256]
gi|269210156|gb|EEZ76611.1| cold shock transcription regulator protein [Neisseria lactamica
ATCC 23970]
gi|288568095|gb|EFC89655.1| cold shock transcription regulator protein [Neisseria mucosa ATCC
25996]
gi|296837712|gb|EFH21650.1| cold shock transcription regulator protein [Neisseria
polysaccharea ATCC 43768]
gi|339887452|gb|EGQ77008.1| cold shock transcription regulator protein [Neisseria macacae
ATCC 33926]
Length = 80
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PD+GG DLF H +I +G++TL E Q V FDV GK Q
Sbjct: 15 ATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGK-Q 73
Query: 67 ALDVTA 72
A ++ A
Sbjct: 74 AANIQA 79
>gi|293606230|ref|ZP_06688593.1| cold shock transcription regulator protein [Achromobacter
piechaudii ATCC 43553]
gi|359800514|ref|ZP_09303055.1| putative cold-shock protein [Achromobacter arsenitoxydans SY8]
gi|421486982|ref|ZP_15934512.1| cold-shock protein [Achromobacter piechaudii HLE]
gi|422317742|ref|ZP_16399041.1| cold-shock protein [Achromobacter xylosoxidans C54]
gi|423018746|ref|ZP_17009467.1| putative cold-shock protein [Achromobacter xylosoxidans AXX-A]
gi|292815377|gb|EFF74495.1| cold shock transcription regulator protein [Achromobacter
piechaudii ATCC 43553]
gi|317407692|gb|EFV87625.1| cold-shock protein [Achromobacter xylosoxidans C54]
gi|338778178|gb|EGP42657.1| putative cold-shock protein [Achromobacter xylosoxidans AXX-A]
gi|359361497|gb|EHK63253.1| putative cold-shock protein [Achromobacter arsenitoxydans SY8]
gi|400194707|gb|EJO27713.1| cold-shock protein [Achromobacter piechaudii HLE]
Length = 81
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/67 (55%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ AKG+GFI PDDGG DLF H SI+ +G++TL E Q V F++ GK
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVAFEIIQGPKGK- 73
Query: 66 QALDVTA 72
QAL++TA
Sbjct: 74 QALNITA 80
>gi|284009245|emb|CBA76349.1| cold shock protein [Arsenophonus nasoniae]
Length = 70
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G V WF+ AKG+GFI P+DG D+FVH +IKS+G++TL E Q VEFD+ E +
Sbjct: 2 MSKVKGNVKWFNEAKGFGFITPEDGSKDVFVHFTAIKSEGFKTLAEGQKVEFDIT-EGEK 60
Query: 64 KYQALDVTA 72
A++V A
Sbjct: 61 GPSAINVVA 69
>gi|224085782|ref|XP_002307695.1| predicted protein [Populus trichocarpa]
gi|222857144|gb|EEE94691.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 57/128 (44%), Gaps = 26/128 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC NC GHVA ECT+ + C+NC +P H A +CP
Sbjct: 53 PNAAVCNNCGLPGHVASECTTQLQ----------CWNCREPGHVASNCP----------- 91
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH A+DC G C NC K GH A DC A C NC K
Sbjct: 92 NEGICHACGRSGHRAKDCPNPEPSPGDVRLCNNCYKPGHFAADCTNDKA-----CKNCRK 146
Query: 246 PGHFAREC 253
GH AR+C
Sbjct: 147 TGHMARDC 154
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C+NC GH AREC N+ C NCG P H A +C Q
Sbjct: 38 LCHNCKRAGHFARECP----------NAAVCNNCGLPGHVASECTTQLQ----------- 76
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG--AGGAGGGGSCFNCGKPG 247
C+ C GH+A +C G C+ CG+SGH A+DC G C NC KPG
Sbjct: 77 CWNCREPGHVASNCPNEGI-------CHACGRSGHRAKDCPNPEPSPGDVRLCNNCYKPG 129
Query: 248 HFARECT 254
HFA +CT
Sbjct: 130 HFAADCT 136
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 59/141 (41%), Gaps = 38/141 (26%)
Query: 125 GPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
PG V +C NC GH A +CT N C NC H ARDC
Sbjct: 115 SPGDVRLCNNCYKPGHFAADCT----------NDKACKNCRKTGHMARDC---------- 154
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSG---GGGGGR--------CYNCGKSGHLARDCGAG 232
N C C GH+AR C TRG+ GG GR C C + GH++RDC
Sbjct: 155 -QNEPVCNLCNISGHVARQC-TRGNSFPDRGGWGRNSSYRDVICRTCNQVGHMSRDC--- 209
Query: 233 GAGGGGSCFNCGKPGHFAREC 253
G C NCG GH A EC
Sbjct: 210 -IGPMIICHNCGGRGHRAIEC 229
>gi|330817033|ref|YP_004360738.1| Cold-shock DNA-binding domain protein [Burkholderia gladioli
BSR3]
gi|327369426|gb|AEA60782.1| Cold-shock DNA-binding domain protein [Burkholderia gladioli
BSR3]
Length = 67
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PDDGG DLFVH IK G+++LY+NQ V ++V+ GK+ A
Sbjct: 3 TGTVKWFNDAKGFGFITPDDGGEDLFVHFSEIKITGFKSLYDNQRVRYEVRNGPKGKHAA 62
>gi|326927837|ref|XP_003210095.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 149
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 30/131 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC P+++ YN
Sbjct: 46 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN--- 93
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ G
Sbjct: 94 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYRCGESG 137
Query: 248 HFARECTKVAN 258
H ARECT A
Sbjct: 138 HLARECTIEAT 148
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQ--------------QGGSNSYNNNSGGCFKCGGYGHLAR 201
+S C+ CG H+AR+CP Q S+S + C++CG GHLA+
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDI---CYRCGESGHLAK 58
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 59 DCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + + G CY CG+ H A+DC Q+
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 A----------CYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDHADE---Q 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 111 KCYSCGEFGHIQKDCTKV 128
>gi|406867883|gb|EKD20920.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 198
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 34/155 (21%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNN-------SGGCYNCGDPEHFARDCPRQQ 177
GP CY C GH++R+CT+ + S CY C H AR+CP
Sbjct: 50 GPKDKTCYKCGQPGHISRDCTNPSSDGAGRGGFGGQGGGSQECYKCSKIGHIARNCPEAG 109
Query: 178 GGSNSYNNNSGG-------------------CFKCGGYGHLARDCITRGSGGGGGGRCYN 218
G G C+ CGGYGH++RDC G +CYN
Sbjct: 110 GYGGGGYGGQSGYGGGQGGYGGGGRAQGGQTCYSCGGYGHMSRDCTQ-------GQKCYN 162
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CG+ GHL+RDC + +C+ C +PGH +C
Sbjct: 163 CGEVGHLSRDCPSEN-NNERTCYKCKQPGHVQAQC 196
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 67/161 (41%), Gaps = 41/161 (25%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG------GS 180
G CYNC G GH++REC ++ CY CG P H +RDC G
Sbjct: 30 GPAKCYNCGGEGHMSRECPDGPKDKT-------CYKCGQPGHISRDCTNPSSDGAGRGGF 82
Query: 181 NSYNNNSGGCFKCGGYGHLARDCIT-----------------------RGSGGGGGGRCY 217
S C+KC GH+AR+C G GG CY
Sbjct: 83 GGQGGGSQECYKCSKIGHIARNCPEAGGYGGGGYGGQSGYGGGQGGYGGGGRAQGGQTCY 142
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CG GH++RDC G C+NCG+ GH +R+C N
Sbjct: 143 SCGGYGHMSRDCTQ-----GQKCYNCGEVGHLSRDCPSENN 178
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 67/168 (39%), Gaps = 51/168 (30%)
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
G P CYNC H AR+C + CYNCG H +R+CP
Sbjct: 5 GAAPPPRGCYNCGDASHQARDCPTR--------GPAKCYNCGGEGHMSRECPD------- 49
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGS----------GGGGGGRCYNCGKSGHLARDCGAG 232
C+KCG GH++RDC S GGG CY C K GH+AR+C
Sbjct: 50 -GPKDKTCYKCGQPGHISRDCTNPSSDGAGRGGFGGQGGGSQECYKCSKIGHIARNCPEA 108
Query: 233 -------------------------GAGGGGSCFNCGKPGHFARECTK 255
A GG +C++CG GH +R+CT+
Sbjct: 109 GGYGGGGYGGQSGYGGGQGGYGGGGRAQGGQTCYSCGGYGHMSRDCTQ 156
>gi|347828477|emb|CCD44174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 503
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 90 SGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRR 149
S +++ R + G + N + + G G +C C+ +GH + CT R
Sbjct: 249 SWRKSSKHSRPKEKESWPGTPEENLERLADAGEPVDRGVPLCSRCNELGHTVKHCTEERV 308
Query: 150 NSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSG 209
+ C+NC + H RDCP + + C C GH +++C S
Sbjct: 309 DGERVQVQ--CFNCSEIGHRVRDCPIPR-------EDKFACRNCKKSGHSSKECPEPRSA 359
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G C NC + GH +RDC GG G GG C NC +PGH A++CT
Sbjct: 360 EGV--ECKNCNEIGHFSRDCPTGGGGDGGLCRNCNQPGHRAKDCT 402
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
V C+NC +GH R+C R + C NC H +++CP +
Sbjct: 315 VQCFNCSEIGHRVRDCPIPREDK------FACRNCKKSGHSSKECPEPRSAEGVE----- 363
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C C GH +RDC T GGG GG C NC + GH A+DC C NC + GH
Sbjct: 364 -CKNCNEIGHFSRDCPT--GGGGDGGLCRNCNQPGHRAKDCTNERVM---ICRNCDEEGH 417
Query: 249 FARECTK 255
+EC K
Sbjct: 418 TGKECPK 424
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+NCG+ H +C + + YN CG GH +C G C C
Sbjct: 73 CFNCGEEGHSKAECTQPPKARSCYN--------CGEEGHTKAECTNPAVAREFTGTCRIC 124
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+SGH A C + C NC + GH EC
Sbjct: 125 EQSGHRASGCPSAPP---KLCNNCKEEGHSILEC 155
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 216 CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
C+NCG+ GH +C SC+NCG+ GH ECT A
Sbjct: 73 CFNCGEEGHSKAECTQ--PPKARSCYNCGEEGHTKAECTNPA 112
>gi|291411194|ref|XP_002721877.1| PREDICTED: zinc finger protein 9 [Oryctolagus cuniculus]
Length = 171
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 25/124 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CYNC GH+A++C +R CY CG H ARDC +
Sbjct: 66 ICYNCGKTGHIAKDCLEPKREREQY-----CYTCGRQGHLARDCT---------HLEEQK 111
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG +GH ++C +CY CG++GH+A +C +C+ CG+ GH
Sbjct: 112 CYSCGEFGHFQKECTQ--------VKCYRCGETGHVAINCKKAKQ---VNCYRCGEFGHL 160
Query: 250 AREC 253
AREC
Sbjct: 161 AREC 164
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG------------CYNCGDPEHFARDCPRQQG 178
C+ C GH AR C S + G CY CG+ H A++C R Q
Sbjct: 6 CFKCGRSGHWARGCPRKEARSQGSRGRGRAIPGTSAMQADICYRCGESGHHAKNCDRLQD 65
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ CG GH+A+DC+ CY CG+ GHLARDC
Sbjct: 66 I----------CYNCGKTGHIAKDCLE--PKREREQYCYTCGRQGHLARDCTHLEEQ--- 110
Query: 239 SCFNCGKPGHFARECTKV 256
C++CG+ GHF +ECT+V
Sbjct: 111 KCYSCGEFGHFQKECTQV 128
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSN-----------SYNNNSGGCFKCGGYGHLARDCITRGS 208
C+ CG H+AR CPR++ S + + C++CG GH A++C
Sbjct: 6 CFKCGRSGHWARGCPRKEARSQGSRGRGRAIPGTSAMQADICYRCGESGHHAKNCDRLQD 65
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CYNCGK+GH+A+DC C+ CG+ GH AR+CT +
Sbjct: 66 I------CYNCGKTGHIAKDCLEPKREREQYCYTCGRQGHLARDCTHLEE 109
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 55/129 (42%), Gaps = 26/129 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH A+ C + CYNCG H A+DC + Y
Sbjct: 46 ICYRCGESGHHAKNC---------DRLQDICYNCGKTGHIAKDCLEPKREREQY------ 90
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH ++C C+ CG+ GH
Sbjct: 91 CYTCGRQGHLARDCTHLEEQ-----KCYSCGEFGHFQKECTQV------KCYRCGETGHV 139
Query: 250 ARECTKVAN 258
A C K
Sbjct: 140 AINCKKAKQ 148
>gi|356516892|ref|XP_003527126.1| PREDICTED: zinc finger protein GIS2-like [Glycine max]
Length = 259
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+NC GH+A ECT+ C+NC +P H A CP
Sbjct: 61 PNVAICHNCGLPGHIASECTT----------KSLCWNCKEPGHMASSCP----------- 99
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH AR+C G C NC K GH+A +C A C NC K
Sbjct: 100 NEGICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKA-----CNNCRK 154
Query: 246 PGHFARECT 254
GH AR+C
Sbjct: 155 TGHLARDCP 163
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 54/127 (42%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC N C+NCG P H A +C
Sbjct: 46 LCKNCKRPGHYARECP----------NVAICHNCGLPGHIASEC-----------TTKSL 84
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C+ CGK+GH AR+C A G C NC K G
Sbjct: 85 CWNCKEPGHMASSCPNEGI-------CHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQG 137
Query: 248 HFARECT 254
H A ECT
Sbjct: 138 HIAAECT 144
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 61/164 (37%), Gaps = 45/164 (27%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C NC GH+A ECT N C NC H
Sbjct: 109 KAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECT----------NEKACNNCRKTGHL 158
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GH+AR C G G
Sbjct: 159 ARDCP-----------NDPICNLCNVSGHVARQCPKANVLGDRSGGGGGGGGARGGGGGG 207
Query: 216 -----CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C NC + GH++RDC G C NCG GH A EC
Sbjct: 208 YRDVVCRNCQQLGHMSRDC----MGPLMICHNCGGRGHLAYECP 247
>gi|356508208|ref|XP_003522851.1| PREDICTED: zinc finger protein GIS2-like [Glycine max]
Length = 254
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+NC GH+A ECT+ C+NC +P H A CP
Sbjct: 59 PNVAICHNCGLPGHIASECTT----------KSLCWNCKEPGHMASSCP----------- 97
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH AR+C G C NC K GH+A +C A C NC K
Sbjct: 98 NEGICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKA-----CNNCRK 152
Query: 246 PGHFARECT 254
GH AR+C
Sbjct: 153 TGHLARDCP 161
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 54/127 (42%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC N C+NCG P H A +C
Sbjct: 44 LCKNCKRPGHYARECP----------NVAICHNCGLPGHIASEC-----------TTKSL 82
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C+ CGK+GH AR+C A G C NC K G
Sbjct: 83 CWNCKEPGHMASSCPNEGI-------CHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQG 135
Query: 248 HFARECT 254
H A ECT
Sbjct: 136 HIAAECT 142
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 61/161 (37%), Gaps = 42/161 (26%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C NC GH+A ECT N C NC H
Sbjct: 107 KAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECT----------NEKACNNCRKTGHL 156
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GH+AR C G G
Sbjct: 157 ARDCP-----------NDPICNLCNVSGHVARQCPKANVLGDRSGGGGGARGGGGGGYRD 205
Query: 216 --CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C NC + GH++RDC G C NCG GH A EC
Sbjct: 206 VVCRNCQQLGHMSRDC----MGPLMICHNCGGRGHLAYECP 242
>gi|395333861|gb|EJF66238.1| hypothetical protein DICSQDRAFT_48600 [Dichomitus squalens LYAD-421
SS1]
Length = 197
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 130 VCYNCDGVGHVARECTSNRRN-------------SNYNNNSGGCYNCGDPEHFARDCPRQ 176
CY C GH++REC N+ S+ N+ S CY CG H AR CP
Sbjct: 48 TCYKCGQEGHISRECPDNQNANGGTSGGGSYTAFSSSNSGSTECYRCGKVGHIARSCPEA 107
Query: 177 QGGSNSYNNNSGG----------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLA 226
GG++ G C+ CGG GHL+RDC+ G +CYNC GH++
Sbjct: 108 PGGTSGGYGGGGYSNFGGGQQRTCYTCGGVGHLSRDCVQ-------GSKCYNCSGFGHIS 160
Query: 227 RDCGAGGAGGGGSCFNCGKPGHFAREC 253
+DC +C+ CG GH +R+C
Sbjct: 161 KDCPQPQR---RACYTCGSEGHISRDC 184
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 69/155 (44%), Gaps = 38/155 (24%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS------ 180
G CYNC GHV+++CT+ + CY CG H +R+CP Q +
Sbjct: 23 GTPTCYNCGLEGHVSKDCTAETKAKT-------CYKCGQEGHISRECPDNQNANGGTSGG 75
Query: 181 ------NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGG--------------RCYNCG 220
+S N+ S C++CG GH+AR C G GG CY CG
Sbjct: 76 GSYTAFSSSNSGSTECYRCGKVGHIARSCPEAPGGTSGGYGGGGYSNFGGGQQRTCYTCG 135
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GHL+RDC G C+NC GH +++C +
Sbjct: 136 GVGHLSRDCVQ-----GSKCYNCSGFGHISKDCPQ 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
GCF CGG+GH A +C G+ CYNCG GH+++DC A +C+ CG+ GH
Sbjct: 5 GCFNCGGFGHQAANCPKAGT-----PTCYNCGLEGHVSKDCTA--ETKAKTCYKCGQEGH 57
Query: 249 FAREC 253
+REC
Sbjct: 58 ISREC 62
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 61/157 (38%), Gaps = 48/157 (30%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC G GH A C + CYNCG H ++DC + + C
Sbjct: 6 CFNCGGFGHQAANCP--------KAGTPTCYNCGLEGHVSKDC--------TAETKAKTC 49
Query: 191 FKCGGYGHLARDC----------------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
+KCG GH++R+C S G CY CGK GH+AR C
Sbjct: 50 YKCGQEGHISRECPDNQNANGGTSGGGSYTAFSSSNSGSTECYRCGKVGHIARSCPEAPG 109
Query: 235 GGGG----------------SCFNCGKPGHFARECTK 255
G G +C+ CG GH +R+C +
Sbjct: 110 GTSGGYGGGGYSNFGGGQQRTCYTCGGVGHLSRDCVQ 146
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
G CYNC G GH++++C +R + CY CG H +RDCP
Sbjct: 147 GSKCYNCSGFGHISKDCPQPQRRA--------CYTCGSEGHISRDCP 185
>gi|308472350|ref|XP_003098403.1| hypothetical protein CRE_06839 [Caenorhabditis remanei]
gi|308269067|gb|EFP13020.1| hypothetical protein CRE_06839 [Caenorhabditis remanei]
Length = 386
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
C++C +P H DCP++ + + G CFKCG H +C +G G C+
Sbjct: 227 AACFHCREPGHRLADCPKRNS-----SQSDGVCFKCGSMEHSIHECKKKGVKGFPYATCF 281
Query: 218 NCGKSGHLARDCGAGGAG---GGGSCFNCGKPGHFARECTKVA 257
C + GH++RDC G GG+C CG GH R+C ++A
Sbjct: 282 VCKQVGHISRDCHQNANGVYPDGGACNVCGAVGHLKRDCPELA 324
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 110 WKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
WK ++RR G C++C GH +C +RNS+ ++ G C+ CG EH
Sbjct: 209 WK-TRETRRIGRQEQKITGAACFHCREPGHRLADCP--KRNSSQSD--GVCFKCGSMEHS 263
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARD 228
+C ++ Y CF C GH++RDC +G GG C CG GHL RD
Sbjct: 264 IHECKKKGVKGFPY----ATCFVCKQVGHISRDCHQNANGVYPDGGACNVCGAVGHLKRD 319
Query: 229 CGAGGAGGGGSCFNCGKPGHFARECT 254
C A G FN K HF T
Sbjct: 320 CPELAAQKAGGAFNQKK--HFTARAT 343
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG--GSCFNCGK 245
CF C GH DC R S G C+ CG H +C G G +CF C +
Sbjct: 227 AACFHCREPGHRLADCPKRNSSQSDGV-CFKCGSMEHSIHECKKKGVKGFPYATCFVCKQ 285
Query: 246 PGHFARECTKVAN 258
GH +R+C + AN
Sbjct: 286 VGHISRDCHQNAN 298
>gi|390335387|ref|XP_792032.2| PREDICTED: protein lin-28 homolog [Strongylocentrotus purpuratus]
Length = 219
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 66/166 (39%), Gaps = 43/166 (25%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
GK WF AK YGF+ PDDG D+FVHQ+ IK GYR+L N+ VE+ Q G+ +A
Sbjct: 50 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGR-EAT 108
Query: 69 DVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGG 128
VT G GG G S+R Y
Sbjct: 109 TVT-------------------------GVDGGDCKG----------SKRRLRPKYRRTA 133
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
C+NC GH A++C CY C +H DCP
Sbjct: 134 NRCFNCGNSGHHAKDCPEPPLPKR-------CYACHAEDHLWADCP 172
>gi|449273600|gb|EMC83073.1| Lin-28 like protein B, partial [Columba livia]
Length = 249
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 46/182 (25%)
Query: 2 AQLTRSTGKVTWFDGAKGYGFIR-------PDDGGADLFVHQKSIKSDGYRTLYENQSVE 54
+Q+ TG WF+ G+GFI P + D+FVHQ + +G+R+L E + VE
Sbjct: 24 SQVLHGTGHCKWFNVRMGFGFISMSNREGSPLESPVDVFVHQSKLYMEGFRSLKEGEPVE 83
Query: 55 FDVQLEADGKYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNN 114
F + + G +++ VT PGG+P S+ KG
Sbjct: 84 FTFKKSSKG-LESIRVTGPGGSPCLGSERRP-------------------------KGKT 117
Query: 115 DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
+R P G CYNC G+ H A+EC+ C+ C H +CP
Sbjct: 118 VQKRK------PKGDRCYNCGGLDHHAKECS-------LPPQPKKCHYCQSIMHMVANCP 164
Query: 175 RQ 176
+
Sbjct: 165 HK 166
>gi|321257884|ref|XP_003193740.1| hypothetical protein CGB_D6640W [Cryptococcus gattii WM276]
gi|317460210|gb|ADV21953.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 247
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 61/155 (39%), Gaps = 36/155 (23%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC GH + C R + + CY CG H DCP +G
Sbjct: 94 GRLCYNCREPGHESTNCPQPR-----STDGKQCYACGGVGHVKSDCPSMRGAFGPGQK-- 146
Query: 188 GGCFKCGGYGHLARDCITRG-----------------------SGGGGGGRCYNCGKSGH 224
CFKCG GHLAR+C G + G +CY C H
Sbjct: 147 --CFKCGRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPVNPDGTPVKCYRCNGENH 204
Query: 225 LARDCGA----GGAGGGGSCFNCGKPGHFARECTK 255
LARDC A C+ C + GH AR+CTK
Sbjct: 205 LARDCLAPRDEAAILASKKCYKCQETGHIARDCTK 239
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 136 GVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGG 195
+GH+A C + R CYNC +P H + +CP+ + + + C+ CGG
Sbjct: 82 SIGHIAENCQAPGR---------LCYNCREPGHESTNCPQPR------STDGKQCYACGG 126
Query: 196 YGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
GH+ DC + G G +C+ CG+ GHLAR+C G
Sbjct: 127 VGHVKSDCPSMRGAFGPGQKCFKCGRPGHLARECTVPG 164
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
V CY C+G H+AR+C + R + S CY C + H ARDC ++
Sbjct: 194 VKCYRCNGENHLARDCLAPRDEAAILA-SKKCYKCQETGHIARDCTKE 240
>gi|315056357|ref|XP_003177553.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
gi|311339399|gb|EFQ98601.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
Length = 472
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 59/142 (41%), Gaps = 23/142 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
C NC +GH+ + C +S C NC P H ARDC + + N G
Sbjct: 265 CSNCGQMGHIMKSCKEE--HSVVERVEVKCVNCKQPGHRARDCKEARVDRFACRNCGKGG 322
Query: 190 ----------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
C +C GH A+DC GGG C NCG H+ +DC
Sbjct: 323 HRSNECTEPRSAEGVECKRCNEVGHFAKDC----PQGGGSRACRNCGSEDHMVKDCDQPR 378
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
+C NC + GHF+R+CTK
Sbjct: 379 NMATVTCHNCEEMGHFSRDCTK 400
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ VGH A++C S C NCG +H +DC N +
Sbjct: 336 GVECKRCNEVGHFAKDCPQ-------GGGSRACRNCGSEDHMVKDC------DQPRNMAT 382
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
C C GH +RDC + +C CG+ GH R C A
Sbjct: 383 VTCHNCEEMGHFSRDCTKKKD--WSKVKCSCCGEMGHTIRRCPQAPA 427
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
N N C NCG HFAR+CP + SG CF CG GH DC +
Sbjct: 44 NANGDTCRNCGQAGHFARECPEPRKL-------SGACFNCGQEGHNKSDC---PNPRIFT 93
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G C C K GH A C C NC GH ECT+
Sbjct: 94 GTCRICEKEGHPAAQCPDRPP---DICKNCKAEGHKTMECTE 132
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC H+ ++C R N + C+NC + HF+RDC +++ S
Sbjct: 357 GSRACRNCGSEDHMVKDCDQPR-----NMATVTCHNCEEMGHFSRDCTKKKDWSKV---- 407
Query: 187 SGGCFKCGGYGHLARDC 203
C CG GH R C
Sbjct: 408 --KCSCCGEMGHTIRRC 422
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS---- 182
V C+NC+ +GH +R+CT + S C CG+ H R CP+ N
Sbjct: 381 ATVTCHNCEEMGHFSRDCTKKKDWSKVK-----CSCCGEMGHTIRRCPQAPADENGGGGG 435
Query: 183 --YNNNS 187
YNNN
Sbjct: 436 GFYNNNE 442
>gi|428672476|gb|EKX73390.1| cold shock protein, putative [Babesia equi]
Length = 102
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ R+ GK WFD KGYGFI D+G D+FVHQ I ++G+R+L E + VE DV LE +
Sbjct: 1 MPRTAGKCKWFDPKKGYGFITLDNG-EDVFVHQSEIHANGFRSLREEERVELDVVLENNK 59
Query: 64 KYQALDVTAPGGAPVHSSKNN 84
K +A+ VT P G V ++++
Sbjct: 60 K-KAIRVTGPRGDYVRGAESD 79
>gi|301108595|ref|XP_002903379.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097751|gb|EEY55803.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 157
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 105 GFGGYWKGNNDSRRNNGGGYG--PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--C 160
G GG+ + + + GG+G G C+ C GH+ R+C ++ +GG C
Sbjct: 15 GQGGHLRRDCPEAPSQEGGFGGYNSGAACFGCGKTGHLKRDCPTS---------AGGRAC 65
Query: 161 YNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCG 220
+NCG H RDCP + +N CG GHL RDC +C++CG
Sbjct: 66 HNCGQVGHIRRDCPEEAQPPKCHN--------CGESGHLRRDCPQELRESR---KCHHCG 114
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
+SGHL RDC C+ CG GH+AR C
Sbjct: 115 QSGHLRRDCPDDSGPSEDKCYQCGDTGHWARNCP 148
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 160 CYNCGDPEHFARDCPR---QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRC 216
C+NCG H RDCP Q+GG YN+ + CF CG GHL RDC T GG C
Sbjct: 11 CHNCGQGGHLRRDCPEAPSQEGGFGGYNSGA-ACFGCGKTGHLKRDCPT----SAGGRAC 65
Query: 217 YNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+NCG+ GH+ RDC C NCG+ GH R+C +
Sbjct: 66 HNCGQVGHIRRDCPE--EAQPPKCHNCGESGHLRRDCPQ 102
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 190 CFKCGGYGHLARDCITRGSGGGG------GGRCYNCGKSGHLARDCGAGGAGGGGSCFNC 243
C CG GHL RDC S GG G C+ CGK+GHL RDC + GG +C NC
Sbjct: 11 CHNCGQGGHLRRDCPEAPSQEGGFGGYNSGAACFGCGKTGHLKRDCPT--SAGGRACHNC 68
Query: 244 GKPGHFARECTKVAN 258
G+ GH R+C + A
Sbjct: 69 GQVGHIRRDCPEEAQ 83
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 215 RCYNCGKSGHLARDC--------GAGGAGGGGSCFNCGKPGHFARECTKVA 257
+C+NCG+ GHL RDC G GG G +CF CGK GH R+C A
Sbjct: 10 KCHNCGQGGHLRRDCPEAPSQEGGFGGYNSGAACFGCGKTGHLKRDCPTSA 60
>gi|390568673|ref|ZP_10248972.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|389939442|gb|EIN01272.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
Length = 67
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ AKG+GFI PD+GG DLF H IK++G+++L ENQ V F+V++ GK
Sbjct: 2 AIGTVKWFNDAKGFGFITPDEGGEDLFAHFSEIKTEGFKSLQENQKVSFEVKMGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|327297590|ref|XP_003233489.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326464795|gb|EGD90248.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 190
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 75/156 (48%), Gaps = 36/156 (23%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + + CY CG H +R+CP G N+Y+
Sbjct: 27 GTPTCYNCGGQGHVSRECTQPPKEKS-------CYRCGMTGHISRECPSSGSGDNNYSGG 79
Query: 187 SGG------CFKCGGYGHLARDCITRGSGGGGGG------------------RCYNCGKS 222
G C+KCG GH+AR+C +G G GGG CY+CG
Sbjct: 80 YSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYSGGYGGRSQTCYSCGGY 139
Query: 223 GHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH+AR C G C+NCG+ GH +R+C A
Sbjct: 140 GHMARGCTQ-----GQKCYNCGEVGHVSRDCPTEAK 170
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSN-------YNNNSGGCYNCGDPEHFARDCPRQQG 178
P CY C GH++REC S+ N + CY CG H AR+C +Q G
Sbjct: 48 PKEKSCYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGG 107
Query: 179 GSNSYNN--------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGH 224
S C+ CGGYGH+AR C G +CYNCG+ GH
Sbjct: 108 SGYGGGYGNSGSGSYSGGYGGRSQTCYSCGGYGHMARGCTQ-------GQKCYNCGEVGH 160
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFAREC 253
++RDC A G C+ C + GH C
Sbjct: 161 VSRDCPT-EAKGERVCYKCKQAGHVQAAC 188
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 45/148 (30%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYG 197
Y ++ GC+NCG+ H ARDCP++ G YN C++CG G
Sbjct: 2 EYQSSGRGCFNCGESSHQARDCPKK-GTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTG 60
Query: 198 HLARDCITRGSG----------GGGGGRCYNCGKSGHLARDCGAGGAGGGG--------- 238
H++R+C + GSG G GG CY CG+ GH+AR+C G G G
Sbjct: 61 HISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSG 120
Query: 239 -----------SCFNCGKPGHFARECTK 255
+C++CG GH AR CT+
Sbjct: 121 SYSGGYGGRSQTCYSCGGYGHMARGCTQ 148
>gi|116696515|ref|YP_842091.1| cold shock protein, DNA-binding [Ralstonia eutropha H16]
gi|113531014|emb|CAJ97361.1| cold shock protein, DNA-binding [Ralstonia eutropha H16]
Length = 98
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
TG V WF+ AKG+GFI+PD GG DLF H I++DG+++L ENQ V+F+V+
Sbjct: 17 IMQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVK 70
>gi|225562591|gb|EEH10870.1| zinc knuckle domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 217
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 64/142 (45%), Gaps = 31/142 (21%)
Query: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ------------QGGSNS 182
G+GHV +C + R + G CY C P H AR CP +GG NS
Sbjct: 47 KGLGHVQADCPTLRISGG--TTGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNS 104
Query: 183 Y-------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ + C+KCGG H ARDC + +CY CGK GH++RDC A G
Sbjct: 105 AFRGGFAGYSRTAMCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCPAPNGG 158
Query: 236 ----GGGSCFNCGKPGHFAREC 253
G C+ C GH +R+C
Sbjct: 159 PLSSAGKVCYKCSLAGHISRDC 180
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 32/121 (26%)
Query: 131 CYNCDGVGHVARECTSNRR--------------NSNYN------NNSGGCYNCGDPEHFA 170
CY C GH+AR C S NS + + + CY CG P HFA
Sbjct: 70 CYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCYKCGGPNHFA 129
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR--GSGGGGGGRCYNCGKSGHLARD 228
RDC Q + C+ CG GH++RDC G G CY C +GH++RD
Sbjct: 130 RDCQAQ----------AMKCYACGKLGHISRDCPAPNGGPLSSAGKVCYKCSLAGHISRD 179
Query: 229 C 229
C
Sbjct: 180 C 180
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 53/131 (40%), Gaps = 33/131 (25%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------CFKCGGYGHLARDCIT-RGSGGG 211
CY CG+ H+A D R N++ + G GH+ DC T R SGG
Sbjct: 7 ACYKCGNIGHYA-DSARSARLRNAFAITDMSRMVARVLAQQKGLGHVQADCPTLRISGGT 65
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGG-------------------------SCFNCGKP 246
GGRCY C GHLAR C + G G G C+ CG P
Sbjct: 66 TGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCYKCGGP 125
Query: 247 GHFARECTKVA 257
HFAR+C A
Sbjct: 126 NHFARDCQAQA 136
>gi|361128417|gb|EHL00352.1| putative DNA-binding protein HEXBP [Glarea lozoyensis 74030]
Length = 1536
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 64/173 (36%), Gaps = 56/173 (32%)
Query: 121 GGGYGPG----GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
GGG G CYNC G REC ++ CY CG P H +RDC
Sbjct: 5 GGGQARGCYNCPAKCYNCGG-----RECPEGPKDKT-------CYKCGQPGHISRDCTNP 52
Query: 177 QG-----------GSNSYNNNSGGCFKCGGYGHLARDC---------------------- 203
G + C+KC GH+AR+C
Sbjct: 53 ASEGAGRGGGGGGGFGGQGGGNQECYKCSKIGHIARNCPEAGGYGGGGGGYGGQQGGGYG 112
Query: 204 --ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G GG CY+CG GH++RDC G C+NCG+ GH + E T
Sbjct: 113 GGQGGFGGRQGGQTCYSCGGYGHMSRDCTQ-----GQKCYNCGEVGHLSHEIT 160
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 15/59 (25%)
Query: 208 SGGGGGGR--------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
S GGG R CYNCG R+C G +C+ CG+PGH +R+CT A+
Sbjct: 3 SYGGGQARGCYNCPAKCYNCG-----GRECPEGPKDK--TCYKCGQPGHISRDCTNPAS 54
>gi|386849414|ref|YP_006267427.1| CspA family cold shock protein [Actinoplanes sp. SE50/110]
gi|359836918|gb|AEV85359.1| cold shock protein (beta-ribbon, CspA family) [Actinoplanes sp.
SE50/110]
Length = 67
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDGGAD+F H +I + GYR+L ENQ VEF++
Sbjct: 2 TTGTVKWFNADKGFGFISPDDGGADVFAHYSAISAGGYRSLDENQKVEFEI 52
>gi|350546127|ref|ZP_08915547.1| Cold shock protein CspG [Candidatus Burkholderia kirkii UZHbot1]
gi|350526089|emb|CCD41360.1| Cold shock protein CspG [Candidatus Burkholderia kirkii UZHbot1]
Length = 67
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+T V WF+ KG+GFI PDDGG DLF H IK++G+++L ENQ V FDV++ GK
Sbjct: 2 ATSTVKWFNDEKGFGFISPDDGGDDLFAHFSEIKAEGFKSLQENQKVSFDVKMGPKGKRA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|256390666|ref|YP_003112230.1| cold-shock DNA-binding domain-containing protein [Catenulispora
acidiphila DSM 44928]
gi|256356892|gb|ACU70389.1| cold-shock DNA-binding domain protein [Catenulispora acidiphila
DSM 44928]
Length = 67
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+G KGYGFI D+GG D+FVH +I+S GYR+L ENQ VEF+V
Sbjct: 2 AQGTVKWFNGEKGYGFISQDEGGPDVFVHFSAIQSSGYRSLEENQRVEFEV 52
>gi|410636136|ref|ZP_11346739.1| cold shock protein [Glaciecola lipolytica E3]
gi|410144313|dbj|GAC13944.1| cold shock protein [Glaciecola lipolytica E3]
Length = 68
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++STG V WF+ KG+GFI PD+GG+D+FVH ++I SDGY+TL E Q V FD++ G
Sbjct: 1 MSKSTGIVKWFNAEKGFGFITPDNGGSDVFVHFRAIASDGYKTLNEGQQVTFDIEQGQKG 60
Query: 64 KYQALDVT 71
QA +VT
Sbjct: 61 P-QAANVT 67
>gi|330912764|ref|XP_003296063.1| hypothetical protein PTT_04676 [Pyrenophora teres f. teres 0-1]
gi|311332086|gb|EFQ95837.1| hypothetical protein PTT_04676 [Pyrenophora teres f. teres 0-1]
Length = 512
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 92/253 (36%), Gaps = 59/253 (23%)
Query: 23 IRPDDGGADLFVHQKSIKSDGYRT-LYENQSVEF--DVQLEADGKYQALDVTAPGGAPVH 79
+R D+ G L Q+ I + L N EF VQ+ A + Q + G P
Sbjct: 232 LREDNMGVYLIAKQQEIAPNMTIIDLIGNPDREFVLSVQVSAKPRRQKM----AQGWPET 287
Query: 80 SSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGH 139
+N +SGY +RG +C NC+ +GH
Sbjct: 288 PEQNMERLASSGYVEDRGV------------------------------PLCNNCNELGH 317
Query: 140 VARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ-----------QGGSNSYNNNSG 188
V + C + C C + H ARDCP++ Q G NS
Sbjct: 318 VRKHCKQEQPERENMQPETQCVYCQEVGHRARDCPKERTNPFACKNCKQEGHNSKECPEP 377
Query: 189 ------GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
C KC GH ++DC C NCG + H+A++C +C N
Sbjct: 378 RSAEGVECRKCNETGHFSKDC-----PNVAARTCRNCGSADHMAKECDQPRNPDTVTCRN 432
Query: 243 CGKPGHFARECTK 255
C K GHF+++C +
Sbjct: 433 CEKMGHFSKDCPE 445
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NC + H + C ++Q + + C C GH ARDC + C NC
Sbjct: 309 CNNCNELGHVRKHCKQEQPERENMQPETQ-CVYCQEVGHRARDCPKERTNPFA---CKNC 364
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
+ GH +++C + G C C + GHF+++C VA
Sbjct: 365 KQEGHNSKECPEPRSAEGVECRKCNETGHFSKDCPNVA 402
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGG-GGRCYNCGKSGHLARDCGAGGAGGG--GSCFNCGK 245
C C GH ARDC + GGGG G CYNCG+ GH DC G+C C +
Sbjct: 106 SCRICKQTGHFARDCPDKPEGGGGLTGECYNCGQVGHNKADCPNERVERPFEGTCKLCDQ 165
Query: 246 PGHFAREC 253
GH A C
Sbjct: 166 EGHRAVNC 173
>gi|9369368|gb|AAF87117.1|AC006434_13 F10A5.22 [Arabidopsis thaliana]
Length = 265
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGG 179
G +C NC GH AR+C+ N C NCG P H A +C R+ G
Sbjct: 62 GNLCNNCKRPGHFARDCS----------NVSVCNNCGLPGHIAAECTAESRCWNCREPGH 111
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
S +N G C CG GH ARDC S G C NC K GHLA DC A
Sbjct: 112 VASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKA----- 166
Query: 240 CFNCGKPGHFAREC 253
C NC GH AR+C
Sbjct: 167 CKNCRTSGHIARDC 180
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NC P HFARDC +N C CG GH+A +C RC+NC
Sbjct: 65 CNNCKRPGHFARDC-----------SNVSVCNNCGLPGHIAAECTAES-------RCWNC 106
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
+ GH+A +C G C +CGK GH AR+C+
Sbjct: 107 REPGHVASNCS-----NEGICHSCGKSGHRARDCS 136
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G C NC + GH ARDC C NCG PGH A ECT
Sbjct: 62 GNLCNNCKRPGHFARDCS-----NVSVCNNCGLPGHIAAECT 98
>gi|62180569|ref|YP_216986.1| cold-shock protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|375114899|ref|ZP_09760069.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62128202|gb|AAX65905.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715045|gb|EFZ06616.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 136
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV------- 57
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V
Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGQKVH 62
Query: 58 QLEADGKYQALDVT 71
Q +++A D+T
Sbjct: 63 QRSTLWRFKATDIT 76
>gi|374854839|dbj|BAL57711.1| cold-shock DNA-binding domain protein [uncultured candidate
division OP1 bacterium]
gi|374856542|dbj|BAL59395.1| cold shock protein ,beta-ribbon, CspA family [uncultured
candidate division OP1 bacterium]
Length = 69
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 46/57 (80%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TGKV WF+ AKG+GFI+ D+GG D+FVH +IK++G++TL E Q+VEFD++ + G
Sbjct: 2 ATGKVKWFNDAKGFGFIQQDNGGPDVFVHFSAIKAEGFKTLREGQAVEFDIEQDPKG 58
>gi|254818580|ref|ZP_05223581.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare ATCC 13950]
gi|379744802|ref|YP_005335623.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare ATCC 13950]
gi|379752090|ref|YP_005340762.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare MOTT-02]
gi|379759515|ref|YP_005345912.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare MOTT-64]
gi|387873487|ref|YP_006303791.1| cold-shock DNA-binding protein family protein [Mycobacterium sp.
MOTT36Y]
gi|378797166|gb|AFC41302.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare ATCC 13950]
gi|378802306|gb|AFC46441.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare MOTT-02]
gi|378807457|gb|AFC51591.1| cold-shock DNA-binding protein family protein [Mycobacterium
intracellulare MOTT-64]
gi|386786945|gb|AFJ33064.1| cold-shock DNA-binding protein family protein [Mycobacterium sp.
MOTT36Y]
Length = 67
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDDG AD+FVH I+ GYR+L ENQ V+F+V A G Q
Sbjct: 2 TQGTVKWFNGEKGFGFIAPDDGSADVFVHYSEIQGGGYRSLEENQRVQFEVGQGAKGP-Q 60
Query: 67 ALDVTA 72
A VTA
Sbjct: 61 ATGVTA 66
>gi|327294357|ref|XP_003231874.1| zinc knuckle transcription factor [Trichophyton rubrum CBS 118892]
gi|326465819|gb|EGD91272.1| zinc knuckle transcription factor [Trichophyton rubrum CBS 118892]
Length = 471
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 57/142 (40%), Gaps = 23/142 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP---------------- 174
C NC +GH+ + C S C NC P H ARDC
Sbjct: 268 CSNCGKMGHIMKSCKEEL--SVVERVEVKCVNCKQPGHRARDCKEARVDRFACRNCGYGG 325
Query: 175 -RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
R + + C +C GH A DC GGG C NCG H+ARDC
Sbjct: 326 HRSNECTEPRSAEGVECKRCNEVGHFANDC----PQGGGSRACRNCGSEDHIARDCDQPR 381
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
+C NC + GHF+R+CTK
Sbjct: 382 NMATVTCRNCEEMGHFSRDCTK 403
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
GV C C+ VGH A +C S C NCG +H ARDC N +
Sbjct: 339 GVECKRCNEVGHFANDCPQ-------GGGSRACRNCGSEDHIARDC------DQPRNMAT 385
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
C C GH +RDC + +C CG+ GH R C GG
Sbjct: 386 VTCRNCEEMGHFSRDCTKKKD--WSKVKCSCCGEMGHTIRRCPQADENGG 433
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
N N C NCG HFAR+CP + SG CF CG GH DC +
Sbjct: 47 NANGDTCRNCGQAGHFARECPEPR-------KPSGACFNCGQEGHNKSDC---PNPRVFT 96
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G C C K GH A +C C NC GH ECT+
Sbjct: 97 GTCRICEKEGHPAAECPDRPP---DICKNCKGEGHKTMECTE 135
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C NC H+AR+C R N + C NC + HF+RDC +++ S
Sbjct: 360 GSRACRNCGSEDHIARDCDQPR-----NMATVTCRNCEEMGHFSRDCTKKKDWSKV---- 410
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C CG GH R C GG G YN
Sbjct: 411 --KCSCCGEMGHTIRRCPQADENGGNVGGFYN 440
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 215 RCYNCGKSGHLARDCGAGGAG---GGGSCFNCGKPGHFARECTK 255
+C NCGK GH+ + C + C NC +PGH AR+C +
Sbjct: 267 KCSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHRARDCKE 310
>gi|13447196|gb|AAK26659.1|AF343317_1 putative DNA binding protein, partial [Schizophyllum commune]
Length = 146
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 31/145 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG---------CYNCGDPEHFARDCPRQQGGS 180
CY C G GH++R+C+S + GG CY CG H AR CP G
Sbjct: 5 TCYKCGGEGHISRDCSSADAGGAGGYSGGGFGGGARGGECYRCGKAGHMARACPEPAPGG 64
Query: 181 NSYN------------NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
N+ + C+ CGG GHL++DC+ G RCYNC ++GH++RD
Sbjct: 65 NASYGGGGSYGYGGGFQSQKSCYTCGGVGHLSKDCVQ-------GQRCYNCSETGHISRD 117
Query: 229 CGAGGAGGGGSCFNCGKPGHFAREC 253
C +C++CG H +R+C
Sbjct: 118 CPNPQK---KACYSCGSESHISRDC 139
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 30/96 (31%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG------------RCYNCGKSGHLARDCGAGGAGGG 237
C+KCGG GH++RDC + +GG GG CY CGK+GH+AR C GG
Sbjct: 6 CYKCGGEGHISRDCSSADAGGAGGYSGGGFGGGARGGECYRCGKAGHMARACPEPAPGGN 65
Query: 238 G------------------SCFNCGKPGHFARECTK 255
SC+ CG GH +++C +
Sbjct: 66 ASYGGGGSYGYGGGFQSQKSCYTCGGVGHLSKDCVQ 101
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
CYNC GH++R+C N CY+CG H +RDCP
Sbjct: 105 CYNCSETGHISRDCP--------NPQKKACYSCGSESHISRDCP 140
>gi|187250904|ref|YP_001875386.1| cold-shock DNA-binding domain-containing protein [Elusimicrobium
minutum Pei191]
gi|186971064|gb|ACC98049.1| Cold-shock DNA-binding domain protein [Elusimicrobium minutum
Pei191]
Length = 66
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ GKV WF+ KGYGF+ P+DG DLFVH + IK +G++TL E Q VEFD+ +E+D +
Sbjct: 2 AKGKVKWFNDQKGYGFVTPEDGSKDLFVHYQEIKGEGFKTLSEGQEVEFDI-VESDKGPK 60
Query: 67 ALDV 70
A++V
Sbjct: 61 AVNV 64
>gi|313900176|ref|ZP_07833676.1| cold shock protein CspB [Clostridium sp. HGF2]
gi|346316204|ref|ZP_08857710.1| cold shock-like protein cspD [Erysipelotrichaceae bacterium
2_2_44A]
gi|373125032|ref|ZP_09538870.1| hypothetical protein HMPREF0982_03799 [Erysipelotrichaceae
bacterium 21_3]
gi|422326803|ref|ZP_16407831.1| hypothetical protein HMPREF0981_01151 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312955228|gb|EFR36896.1| cold shock protein CspB [Clostridium sp. HGF2]
gi|345903387|gb|EGX73152.1| cold shock-like protein cspD [Erysipelotrichaceae bacterium
2_2_44A]
gi|371658253|gb|EHO23535.1| hypothetical protein HMPREF0982_03799 [Erysipelotrichaceae
bacterium 21_3]
gi|371665090|gb|EHO30257.1| hypothetical protein HMPREF0981_01151 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 66
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STGKV WF+ KGYGFI D+G D+FVH SI+SDG+RTL E Q+V FDV +E+D Q
Sbjct: 2 STGKVKWFNAEKGYGFITSDEG-KDIFVHYSSIQSDGFRTLEEGQAVNFDV-VESDRGQQ 59
Query: 67 ALDVT 71
A +VT
Sbjct: 60 AANVT 64
>gi|348570490|ref|XP_003471030.1| PREDICTED: cellular nucleic acid-binding protein-like [Cavia
porcellus]
Length = 169
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 61/144 (42%), Gaps = 36/144 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH A+ C + CY+CG H A+DCP +
Sbjct: 46 ICYRCGAAGHYAKNC----------DLQDICYSCGKSGHIAKDCPEPK------QQKEQC 89
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG---------------AGGA 234
C+ C GHLARDC R +CY CG+SGH+ +DC +
Sbjct: 90 CYTCSRPGHLARDCDQRKVQ-----KCYTCGESGHIQKDCAQVRCYRCGETGHMAMSCNK 144
Query: 235 GGGGSCFNCGKPGHFARECTKVAN 258
+C+ CG+ GH ARECT A
Sbjct: 145 ASEVNCYRCGEAGHIARECTVEAT 168
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 18/105 (17%)
Query: 160 CYNCGDPEHFARDCP----RQQGGSNSYN-------NNSGGCFKCGGYGHLARDCITRGS 208
C+ CG H+AR+CP RQ+G +S + + S C++CG GH A++C +
Sbjct: 6 CFKCGRNGHWARECPKGGARQRGFRSSDSGPQCSSASQSDICYRCGAAGHYAKNCDLQDI 65
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CY+CGKSGH+A+DC C+ C +PGH AR+C
Sbjct: 66 -------CYSCGKSGHIAKDCPEPKQQKEQCCYTCSRPGHLARDC 103
>gi|99907739|gb|ABF68760.1| CNBP mutant 36-163, partial [synthetic construct]
Length = 128
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC H++R+C ++ CYNCG H ARDC + N C
Sbjct: 25 CYNCHRSXHISRDCKEPKKE-----REQCCYNCGKAGHVARDCD---------HANEQKC 70
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG+GH + C +CY CG+ GH+A C +C+NCGK GH A
Sbjct: 71 YSCGGFGHFQKLC--------DKVKCYRCGEIGHVAVQCSKATEV---NCYNCGKTGHLA 119
Query: 251 RECTKVAN 258
R+C+ A+
Sbjct: 120 RDCSIEAS 127
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CY CG+ H ARDC + + C+ C H++RDC + CYNC
Sbjct: 5 CYRCGEQGHIARDCEQTEDA----------CYNCHRSXHISRDC--KEPKKEREQCCYNC 52
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
GK+GH+ARDC C++CG GHF + C KV
Sbjct: 53 GKAGHVARDCDHANE---QKCYSCGGFGHFQKLCDKV 86
>gi|323452553|gb|EGB08427.1| hypothetical protein AURANDRAFT_16921, partial [Aureococcus
anophagefferens]
Length = 70
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 14 FDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDVTAP 73
F+ KGYGFI PD+GG D+FVHQ I + G+R+L E ++VEF+++++ +G+ +A+ VT P
Sbjct: 1 FNTVKGYGFITPDNGGGDVFVHQTQIYARGFRSLAEGENVEFEIEMDQNGRERAVSVTGP 60
Query: 74 GG 75
G
Sbjct: 61 EG 62
>gi|154279524|ref|XP_001540575.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412518|gb|EDN07905.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 221
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 64/142 (45%), Gaps = 31/142 (21%)
Query: 135 DGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ------------QGGSNS 182
G+GHV +C + R + G CY C P H AR CP +GG NS
Sbjct: 51 KGLGHVQADCPTLRISGGATG--GRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNS 108
Query: 183 Y-------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
+ + C+KCGG H ARDC + +CY CGK GH++RDC A G
Sbjct: 109 AFRGGFAGYSRTAMCYKCGGPNHFARDCQAQAM------KCYACGKLGHISRDCPAPNGG 162
Query: 236 ----GGGSCFNCGKPGHFAREC 253
G C+ C GH +R+C
Sbjct: 163 PLSSAGKVCYKCSLAGHISRDC 184
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 108 GYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRR--------------NSNY 153
G+ + + + R +GG G CY C GH+AR C S NS +
Sbjct: 54 GHVQADCPTLRISGGATGGR---CYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAF 110
Query: 154 N------NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR- 206
+ + CY CG P HFARDC Q + C+ CG GH++RDC
Sbjct: 111 RGGFAGYSRTAMCYKCGGPNHFARDCQAQ----------AMKCYACGKLGHISRDCPAPN 160
Query: 207 -GSGGGGGGRCYNCGKSGHLARDC 229
G G CY C +GH++RDC
Sbjct: 161 GGPLSSAGKVCYKCSLAGHISRDC 184
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 55/135 (40%), Gaps = 37/135 (27%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSY----NNNSGG------CFKCGGYGHLARDCIT-RG 207
CY CG+ H+A D R N++ NN + G GH+ DC T R
Sbjct: 7 ACYKCGNIGHYA-DSARSARLRNAFAITANNRDMSRMVARVLAQQKGLGHVQADCPTLRI 65
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGG-------------------------SCFN 242
SGG GGRCY C GHLAR C + G G G C+
Sbjct: 66 SGGATGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCYK 125
Query: 243 CGKPGHFARECTKVA 257
CG P HFAR+C A
Sbjct: 126 CGGPNHFARDCQAQA 140
>gi|284030059|ref|YP_003379990.1| cold-shock DNA-binding domain-containing protein [Kribbella
flavida DSM 17836]
gi|283809352|gb|ADB31191.1| cold-shock DNA-binding domain protein [Kribbella flavida DSM
17836]
Length = 67
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
++G V WF+G KG+GFI D GGAD+FVH +I +DG+RTL ENQ VEFD+
Sbjct: 2 ASGTVKWFNGEKGFGFISQDGGGADVFVHYSAIATDGFRTLDENQKVEFDL 52
>gi|452985547|gb|EME85303.1| hypothetical protein MYCFIDRAFT_101930, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 184
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-------CYNCGDPEHFARDCPRQQGGSNSY 183
CY C GH++REC + + GG CY CG H AR+C + G ++
Sbjct: 48 CYACGETGHMSRECPNGGGGGARSGGFGGGAGSDQECYKCGKVGHIARNCTQGGYGGGNF 107
Query: 184 NN-------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG 230
+ C+ CGGYGHL+RDC+ G +CYNCG+ GHL+RDC
Sbjct: 108 GGGRGGFGGGYGGGNSQQSCYTCGGYGHLSRDCVQ-------GQKCYNCGELGHLSRDC- 159
Query: 231 AGGAGGGGSCFNCGKPGHFAREC 253
+ A +C+ C +PGH C
Sbjct: 160 SSEASSERTCYRCKQPGHVQASC 182
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 35/155 (22%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GH++R+CT ++ + CY CG+ H +R+CP GG
Sbjct: 22 GNPTCYNCGGQGHLSRDCTEPAKDKS-------CYACGETGHMSRECPNGGGGGARSGGF 74
Query: 187 SGG------CFKCGGYGHLARDCITRGSGGGGGG-----------------RCYNCGKSG 223
GG C+KCG GH+AR+C G GGG G CY CG G
Sbjct: 75 GGGAGSDQECYKCGKVGHIARNCTQGGYGGGNFGGGRGGFGGGYGGGNSQQSCYTCGGYG 134
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
HL+RDC G C+NCG+ GH +R+C+ A+
Sbjct: 135 HLSRDCVQGQ-----KCYNCGELGHLSRDCSSEAS 164
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 68/158 (43%), Gaps = 45/158 (28%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC H AREC N + CYNCG H +RDC +
Sbjct: 1 GGRACYNCGDTTHQARECP--------NKGNPTCYNCGGQGHLSRDC--------TEPAK 44
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGG----------RCYNCGKSGHLARDCGAGGAGG 236
C+ CG GH++R+C G GG G CY CGK GH+AR+C GG GG
Sbjct: 45 DKSCYACGETGHMSRECPNGGGGGARSGGFGGGAGSDQECYKCGKVGHIARNCTQGGYGG 104
Query: 237 GG-------------------SCFNCGKPGHFARECTK 255
G SC+ CG GH +R+C +
Sbjct: 105 GNFGGGRGGFGGGYGGGNSQQSCYTCGGYGHLSRDCVQ 142
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVA 257
GG CYNCG + H AR+C G +C+NCG GH +R+CT+ A
Sbjct: 1 GGRACYNCGDTTHQARECPNKG---NPTCYNCGGQGHLSRDCTEPA 43
>gi|391339398|ref|XP_003744037.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Metaseiulus
occidentalis]
Length = 182
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 61/146 (41%), Gaps = 38/146 (26%)
Query: 128 GVVCYNCDGVGHVARECT------------------SNRRNSNYNNNSGGCYNCGDPEHF 169
G CY C GH AREC+ R CY C HF
Sbjct: 4 GSECYRCHRTGHFARECSLPDDGERRGPRGGGRGGRGGGRGGFRGGFREKCYKCNRLGHF 63
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
ARDC C++C G GH+A+DC G CYNCGK+GH+AR+C
Sbjct: 64 ARDC----------KETEDRCYRCNGTGHIAKDCQQ------GEMSCYNCGKTGHIAREC 107
Query: 230 GAGGAGGGGSCFNCGKPGHFARECTK 255
SC+ CGKPGH R+C +
Sbjct: 108 PEVDK----SCYRCGKPGHIFRDCPE 129
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 30/123 (24%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+G GH+A++C CYNCG H AR+CP C
Sbjct: 74 CYRCNGTGHIAKDC---------QQGEMSCYNCGKTGHIARECP----------EVDKSC 114
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
++CG GH+ RDC G +CY CG+ GH +R+C C+ CG+ GH +
Sbjct: 115 YRCGKPGHIFRDCPE------DGQKCYTCGRFGHFSRECPL-----DRRCYVCGQGGHIS 163
Query: 251 REC 253
REC
Sbjct: 164 REC 166
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 30/123 (24%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G + CYNC GH+AREC ++ CY CG P H RDCP +
Sbjct: 90 GEMSCYNCGKTGHIARECPEVDKS---------CYRCGKPGHIFRDCP----------ED 130
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+ CG +GH +R+C RCY CG+ GH++R+C G G C+ +P
Sbjct: 131 GQKCYTCGRFGHFSRECPL-------DRRCYVCGQGGHISREC--QGEGQNDLCY--ARP 179
Query: 247 GHF 249
HF
Sbjct: 180 SHF 182
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 49/114 (42%), Gaps = 27/114 (23%)
Query: 160 CYNCGDPEHFARDCP-----------------RQQGGSNSYNNNSGGCFKCGGYGHLARD 202
CY C HFAR+C R G C+KC GH ARD
Sbjct: 7 CYRCHRTGHFARECSLPDDGERRGPRGGGRGGRGGGRGGFRGGFREKCYKCNRLGHFARD 66
Query: 203 CITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
C RCY C +GH+A+DC G SC+NCGK GH AREC +V
Sbjct: 67 CKE------TEDRCYRCNGTGHIAKDCQQGEM----SCYNCGKTGHIARECPEV 110
>gi|348540579|ref|XP_003457765.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oreochromis niloticus]
Length = 170
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 65/145 (44%), Gaps = 35/145 (24%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
+ CY C +GHVAR+C CYNCG +H +RDC P+++ YN
Sbjct: 45 LFCYRCGELGHVARDC---------ERTEDACYNCGREDHISRDCKEPKKEREQLCYNCG 95
Query: 187 SGG-------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
G C+ CG +GH+ + C +CY CG+ GH+A C
Sbjct: 96 KAGHMARNCNHAHEQKCYSCGSFGHIQKCC--------EKVKCYRCGEIGHVAVHCSKAS 147
Query: 234 AGGGGSCFNCGKPGHFARECTKVAN 258
+C+N GK GH A+ECT A
Sbjct: 148 EL---NCYNYGKSGHLAKECTIEAT 169
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 156 NSGGCYNCGDPEHFARDCP---------RQQGGSNSYNNNSGG--CFKCGGYGHLARDCI 204
+S C+ CG H+ ++CP R +G ++++ S C++CG GH+ARDC
Sbjct: 2 SSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKGDTHHQTSMNLFCYRCGELGHVARDCE 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNCG+ H++RDC C+NCGK GH AR C
Sbjct: 62 RTEDA------CYNCGREDHISRDCKEPKKEREQLCYNCGKAGHMARNC 104
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 19/85 (22%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR---------------CYNCGKSGHLARDCG 230
+S CF CG GH ++C + G G G G CY CG+ GH+ARDC
Sbjct: 2 SSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKGDTHHQTSMNLFCYRCGELGHVARDC- 60
Query: 231 AGGAGGGGSCFNCGKPGHFARECTK 255
+C+NCG+ H +R+C +
Sbjct: 61 ---ERTEDACYNCGREDHISRDCKE 82
>gi|321259015|ref|XP_003194228.1| DNA-binding protein hexbp [Cryptococcus gattii WM276]
gi|317460699|gb|ADV22441.1| DNA-binding protein hexbp, putative [Cryptococcus gattii WM276]
Length = 200
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 44/166 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG-----------------------CYNCGDP 166
CYNC GH++REC + + Y G CY CG P
Sbjct: 29 TCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQGPGAGGFGGASGGGECYRCGKP 88
Query: 167 EHFARDCPRQ-------------QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
H AR CP G + + C+ CGG GH++R+C + S G GG
Sbjct: 89 GHIARMCPESGDAAAGGFGGAGGYGYAGGAGFGNKSCYTCGGVGHISRECPSGASRGFGG 148
Query: 214 G-----RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G +CYNCG+ GH++R+C G +C++CG+PGH A C
Sbjct: 149 GFGGPRKCYNCGQDGHISREC---PQEQGKTCYSCGQPGHIASACP 191
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 62/154 (40%), Gaps = 42/154 (27%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P G C+ C GHVA C + CYNCG H +R+CP+ +
Sbjct: 4 APRGSSCFKCGQQGHVAAACPAEAPT---------CYNCGLSGHLSRECPQPK------- 47
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGG------ 233
+ C+ CG GHL+ C GG GG CY CGK GH+AR C G
Sbjct: 48 --NKACYTCGQEGHLSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGG 105
Query: 234 -------------AGGGGSCFNCGKPGHFARECT 254
G SC+ CG GH +REC
Sbjct: 106 FGGAGGYGYAGGAGFGNKSCYTCGGVGHISRECP 139
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+ CG H A CP + + C+ CG GHL+R+C + CY C
Sbjct: 10 CFKCGQQGHVAAACPAE----------APTCYNCGLSGHLSRECPQPKNKA-----CYTC 54
Query: 220 GKSGHLARDC-------GAGGAGGGGSCFNCGKPGHFARECTK 255
G+ GHL+ C G GGA GGG C+ CGKPGH AR C +
Sbjct: 55 GQEGHLSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPE 97
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G G C+ CG+ GH+A C A +C+NCG GH +REC + N
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAP----TCYNCGLSGHLSRECPQPKN 48
>gi|225555534|gb|EEH03826.1| zinc knuckle domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 184
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 65/154 (42%), Gaps = 33/154 (21%)
Query: 125 GPGGVVCYNCDGVGHVARECTS-----------NRRNSNYNNNSGGCYNCGDPEHFARDC 173
P CY C GH++R+CTS CY CG H AR+C
Sbjct: 37 APKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNC 96
Query: 174 PRQQGGSNSYNNNSGG--------------CFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
+ G + + G C+ CGGYGH+ARDC G +CYNC
Sbjct: 97 SQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQ-------GQKCYNC 149
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
G+ GH++RDC A G C+ C +PGH C
Sbjct: 150 GEVGHVSRDCPT-EAKGERVCYKCKQPGHVQATC 182
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 69/174 (39%), Gaps = 51/174 (29%)
Query: 124 YGPGGVVCYNCDGVGHVA-----------RECTSNRRNSNYNNNSGGCYNCGDPEHFARD 172
Y GG C+NC H RECT+ + CY CG H +RD
Sbjct: 3 YQSGGRGCFNCGDAAHQVNMFCALYNCGGRECTAAPKEKT-------CYRCGQAGHISRD 55
Query: 173 CPRQQGGSNSYNNNSGG----------CFKCGGYGHLARDCITRGSGGGGGG-------- 214
C G + N+ C+KCG GH+AR+C G G GG
Sbjct: 56 CTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGY 115
Query: 215 ----------RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
CY+CG GH+ARDC G C+NCG+ GH +R+C A
Sbjct: 116 SGGYGGGRQQTCYSCGGYGHMARDCTQ-----GQKCYNCGEVGHVSRDCPTEAK 164
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 53/149 (35%)
Query: 152 NYNNNSGGCYNCGDPEHFA-----------RDCPRQQGGSNSYNNNSGGCFKCGGYGHLA 200
+Y + GC+NCGD H R+C + C++CG GH++
Sbjct: 2 DYQSGGRGCFNCGDAAHQVNMFCALYNCGGREC--------TAAPKEKTCYRCGQAGHIS 53
Query: 201 RDCITRGSG--------------GGGGGRCYNCGKSGHLARDCGAGGAGGGG-------- 238
RDC + GSG GG CY CG+ GH+AR+C G G G
Sbjct: 54 RDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGYGSGGYGGATGG 113
Query: 239 ------------SCFNCGKPGHFARECTK 255
+C++CG GH AR+CT+
Sbjct: 114 GYSGGYGGGRQQTCYSCGGYGHMARDCTQ 142
>gi|425734637|ref|ZP_18852955.1| cold shock protein [Brevibacterium casei S18]
gi|425481251|gb|EKU48412.1| cold shock protein [Brevibacterium casei S18]
Length = 67
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ KGYGFI+PDDG AD+F H +I+S GYR L E Q+VEF+ ++ G
Sbjct: 2 TTGTVKWFNAEKGYGFIQPDDGSADVFTHYSAIESTGYRELVEGQNVEFESEMGQKG 58
>gi|326919350|ref|XP_003205944.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 134
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
CYNCG P H ARDC + + C+ CG +GH+ +DC +CY C
Sbjct: 55 CYNCGKPGHLARDCD---------HADKQKCYSCGEFGHIQKDCTK--------VKCYRC 97
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G++GH+A C +C+ CGK GH ARECT A
Sbjct: 98 GETGHVAISCSKTSEV---NCYRCGKSGHLARECTIEAT 133
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 25/99 (25%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH+AR+C + + CY+CG+ H +DC + + C
Sbjct: 55 CYNCGKPGHLARDCD--------HADKQKCYSCGEFGHIQKDCTKVK------------C 94
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
++CG GH+A C CY CGKSGHLAR+C
Sbjct: 95 YRCGETGHVAISC-----SKTSEVNCYRCGKSGHLAREC 128
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 27/105 (25%)
Query: 154 NNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG 213
+ GG Y C +P+ C C+ CG GHLARDC
Sbjct: 35 SQQRGGKYYCKEPKREREQC----------------CYNCGKPGHLARDC-----DHADK 73
Query: 214 GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+CY+CG+ GH+ +DC C+ CG+ GH A C+K +
Sbjct: 74 QKCYSCGEFGHIQKDCTKV------KCYRCGETGHVAISCSKTSE 112
>gi|347441721|emb|CCD34642.1| similar to zinc knuckle domain-containing protein [Botryotinia
fuckeliana]
Length = 206
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCPRQQG 178
GP VCY C GH++++C++ G CY C H AR+CP G
Sbjct: 53 GPKEKVCYRCGTSGHISKDCSNPPTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAGG 112
Query: 179 GSNSYNNN-----------------SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGK 221
+ S CF CGGYGHL+RDC G +CYNCG+
Sbjct: 113 YGGNQGYGGNQGGYGGGFGGGARQGSQTCFSCGGYGHLSRDCTQ-------GQKCYNCGE 165
Query: 222 SGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHL+RDC + C+ C + GH +C
Sbjct: 166 VGHLSRDC-SQETSEARRCYECKQEGHEKLDC 196
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 68/157 (43%), Gaps = 48/157 (30%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH AREC S CYNC +P H +RDCP C
Sbjct: 16 CFTCGTEGHQARECPSR--------GPPKCYNCDNPGHLSRDCPE--------GPKEKVC 59
Query: 191 FKCGGYGHLARDCITRGS---------GGGGGGRCYNCGKSGHLARDCGAGGAG------ 235
++CG GH+++DC + GGGGG +CY C K GH+AR+C G
Sbjct: 60 YRCGTSGHISKDCSNPPTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGY 119
Query: 236 -----------------GGGSCFNCGKPGHFARECTK 255
G +CF+CG GH +R+CT+
Sbjct: 120 GGNQGGYGGGFGGGARQGSQTCFSCGGYGHLSRDCTQ 156
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 68/155 (43%), Gaps = 38/155 (24%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC---PRQQGGSNSY 183
G CYNCD GH++R+C + CY CG H ++DC P + G
Sbjct: 33 GPPKCYNCDNPGHLSRDCPEGPKEKV-------CYRCGTSGHISKDCSNPPTEGAGRGGG 85
Query: 184 NNNSGG--CFKCGGYGHLARDCIT---------------------RGSGGGGGGRCYNCG 220
GG C+KC GH+AR+C G G C++CG
Sbjct: 86 YGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGARQGSQTCFSCG 145
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GHL+RDC G C+NCG+ GH +R+C++
Sbjct: 146 GYGHLSRDCTQGQ-----KCYNCGEVGHLSRDCSQ 175
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
GCF CG GH AR+C +RG +CYNC GHL+RDC G C+ CG GH
Sbjct: 15 GCFTCGTEGHQARECPSRGP-----PKCYNCDNPGHLSRDCPEGPK--EKVCYRCGTSGH 67
Query: 249 FARECT 254
+++C+
Sbjct: 68 ISKDCS 73
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G C++C G GH++R+CT ++ CYNCG+ H +RDC ++ +
Sbjct: 137 GSQTCFSCGGYGHLSRDCTQGQK----------CYNCGEVGHLSRDCSQE-------TSE 179
Query: 187 SGGCFKCGGYGHLARDCITRGSGGG 211
+ C++C GH DC R G
Sbjct: 180 ARRCYECKQEGHEKLDCPLRKKAFG 204
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
D T GG C+ CG GH AR+C + G C+NC PGH +R+C +
Sbjct: 2 DSFTSLQGGAPNRGCFTCGTEGHQARECPSRGP---PKCYNCDNPGHLSRDCPE 52
>gi|187478585|ref|YP_786609.1| cold shock-like protein [Bordetella avium 197N]
gi|115423171|emb|CAJ49702.1| cold shock-like protein [Bordetella avium 197N]
Length = 81
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ AKG+GFI PDDGG DLF H SI+ +G++TL E Q V F++ GK
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVSFEIIQGPKGK- 73
Query: 66 QALDVTA 72
QAL++T+
Sbjct: 74 QALNITS 80
>gi|400537984|ref|ZP_10801506.1| hypothetical protein MCOL_V226387 [Mycobacterium colombiense CECT
3035]
gi|400329028|gb|EJO86539.1| hypothetical protein MCOL_V226387 [Mycobacterium colombiense CECT
3035]
Length = 67
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDDG DLFVH I+ +GYR+L ENQ V+F+V+ A G Q
Sbjct: 2 AQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQGNGYRSLDENQRVQFEVEQGAKGP-Q 60
Query: 67 ALDVTA 72
A+ V++
Sbjct: 61 AVGVSS 66
>gi|328869417|gb|EGG17795.1| hypothetical protein DFA_08795 [Dictyostelium fasciculatum]
Length = 521
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 30/129 (23%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C G GH CT S Y + G C++C H +CP S
Sbjct: 285 IVCYKCGGEGHQQIACT-----SKYPSTGGVCHSCSGRGHIQYNCP------------SA 327
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGR----CYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
C++CG GH + C T G GG + CY CGK GHLA+DC CF C
Sbjct: 328 KCYRCGQNGHQQKYC-TYGPSEGGKPKNVFPCYACGKEGHLAKDCDV--------CFTCK 378
Query: 245 KPGHFAREC 253
+PGH +++C
Sbjct: 379 QPGHKSKDC 387
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 57/150 (38%), Gaps = 50/150 (33%)
Query: 124 YGPGGVVCYNCDGVGHVARECTS-----------NRRNSNYNNNSGG-------CYNCGD 165
Y G VC++C G GH+ C S ++ Y + GG CY CG
Sbjct: 304 YPSTGGVCHSCSGRGHIQYNCPSAKCYRCGQNGHQQKYCTYGPSEGGKPKNVFPCYACGK 363
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHL 225
H A+DC CF C GH ++DC C+ C + GH
Sbjct: 364 EGHLAKDCDV--------------CFTCKQPGHKSKDCDV----------CHTCKERGHR 399
Query: 226 ARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
A++C CF C K GH + EC +
Sbjct: 400 AKECQL--------CFECRKVGHKSWECPE 421
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+KCGG GH C ++ GG C++C GH+ +C + C+ CG+ GH
Sbjct: 287 CYKCGGEGHQQIACTSKYPSTGG--VCHSCSGRGHIQYNCPSA------KCYRCGQNGHQ 338
Query: 250 ARECT 254
+ CT
Sbjct: 339 QKYCT 343
>gi|163856975|ref|YP_001631273.1| cold-shock protein [Bordetella petrii DSM 12804]
gi|163260703|emb|CAP43005.1| cold-shock protein [Bordetella petrii]
Length = 81
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ AKG+GFI PDDGG DLF H SI+ +G++TL E Q V F++ GK
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVAFEIIQGPKGK- 73
Query: 66 QALDVTA 72
QAL++T+
Sbjct: 74 QALNITS 80
>gi|118616248|ref|YP_904580.1| cold shock protein a, CspA [Mycobacterium ulcerans Agy99]
gi|118568358|gb|ABL03109.1| cold shock protein a, CspA [Mycobacterium ulcerans Agy99]
Length = 67
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MAQ G V WF+G KG+GFI PDDG DLFVH I+ GYR+L ENQ V+F+V+
Sbjct: 1 MAQ-----GTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQCSGYRSLEENQRVQFEVEQG 55
Query: 61 ADGKYQALDVTA 72
G QA+ V+A
Sbjct: 56 TKGP-QAVGVSA 66
>gi|145348455|ref|XP_001418664.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578894|gb|ABO96957.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 153
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 122 GGYGPGGVVCYNCDGVGHVARECTSNR-RNSNYNNNSGGCYNCGDPEHFARDCPRQQGGS 180
GG V C+ C GVGH R+C + ++ CYNCG +H ARDC +
Sbjct: 27 GGIWRSKVTCFGCRGVGHTLRDCRVAKGGSATMRRGEKSCYNCGASDHAARDC-----AA 81
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
N CF CG GHL++ C G GG C C HL +DC G +
Sbjct: 82 AWTNYAHAKCFVCGETGHLSKSCPRNERGVYVNGGECKICKAKDHLVKDC----PHKGDT 137
Query: 240 CFNCGKPGHFARECTK 255
C CG+ GHFA C+K
Sbjct: 138 CIRCGERGHFAAGCSK 153
>gi|383788937|ref|YP_005473506.1| cold shock protein [Caldisericum exile AZM16c01]
gi|381364574|dbj|BAL81403.1| cold shock protein [Caldisericum exile AZM16c01]
Length = 70
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ + TG+V WF+ KG+GFI PD+GG DLFVH +I++ GY+TL E Q VEF+++ + D
Sbjct: 1 MEKQTGRVKWFNSQKGFGFIVPDNGGKDLFVHFSAIQTSGYKTLKEGQKVEFEIE-QTDK 59
Query: 64 KYQALDVTAPG 74
+A++V G
Sbjct: 60 GDKAVNVKVIG 70
>gi|377811293|ref|YP_005043733.1| cold-shock protein [Burkholderia sp. YI23]
gi|413961711|ref|ZP_11400939.1| cold-shock protein [Burkholderia sp. SJ98]
gi|357940654|gb|AET94210.1| cold-shock DNA-binding domain protein [Burkholderia sp. YI23]
gi|413930583|gb|EKS69870.1| cold-shock protein [Burkholderia sp. SJ98]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 41/58 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+TG V WF+ AKG+GFI PDDGG DLF H I+S G+++L ENQ V F+V+ GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIQSKGFKSLQENQKVSFEVKQGPKGK 59
>gi|336310930|ref|ZP_08565899.1| cold shock protein CspA [Shewanella sp. HN-41]
gi|335865610|gb|EGM70626.1| cold shock protein CspA [Shewanella sp. HN-41]
Length = 82
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
++++TG V WF+ KG+GFI PD+GGAD FVH ++I S+G++TL E Q V FD++
Sbjct: 1 MSKTTGVVKWFNEEKGFGFISPDNGGADAFVHFRAIVSEGFKTLGEGQKVSFDIE 55
>gi|220911419|ref|YP_002486728.1| cold-shock DNA-binding domain-containing protein [Arthrobacter
chlorophenolicus A6]
gi|325961974|ref|YP_004239880.1| cold-shock DNA-binding protein family [Arthrobacter
phenanthrenivorans Sphe3]
gi|219858297|gb|ACL38639.1| cold-shock DNA-binding domain protein [Arthrobacter
chlorophenolicus A6]
gi|323468061|gb|ADX71746.1| cold-shock DNA-binding protein family [Arthrobacter
phenanthrenivorans Sphe3]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDG AD+F H +I S GYR+L ENQ VEFDV
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGSADVFAHYSAIASSGYRSLDENQKVEFDV 52
>gi|405120721|gb|AFR95491.1| DNA-binding protein hexbp [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 45/167 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG-----------------------CYNCGDP 166
CYNC GH++REC + + Y G CY CG P
Sbjct: 29 TCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQGPGAGGFGGASGGGECYRCGKP 88
Query: 167 EHFARDCPRQ--------------QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGG 212
H AR CP G + C+ CGG GH++R+C + S G G
Sbjct: 89 GHIARMCPESGDAAAGGFGGAGGYGGYGGGAGFGNKSCYTCGGVGHISRECPSGASRGFG 148
Query: 213 GG-----RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
GG +CYNCG+ GH++R+C G +C++CG+PGH A C
Sbjct: 149 GGFGGPRKCYNCGQDGHISREC---PQEQGKTCYSCGQPGHIASACP 192
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 62/155 (40%), Gaps = 43/155 (27%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P G C+ C GHVA C + CYNCG H +R+CP+ +
Sbjct: 4 APRGSSCFKCGQQGHVAAACPAEAPT---------CYNCGLSGHLSRECPQPK------- 47
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGG------ 233
+ C+ CG GHL+ C GG GG CY CGK GH+AR C G
Sbjct: 48 --NKACYTCGQEGHLSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGG 105
Query: 234 --------------AGGGGSCFNCGKPGHFARECT 254
G SC+ CG GH +REC
Sbjct: 106 FGGAGGYGGYGGGAGFGNKSCYTCGGVGHISRECP 140
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+ CG H A CP + + C+ CG GHL+R+C + CY C
Sbjct: 10 CFKCGQQGHVAAACPAE----------APTCYNCGLSGHLSRECPQPKNKA-----CYTC 54
Query: 220 GKSGHLARDC-------GAGGAGGGGSCFNCGKPGHFARECTK 255
G+ GHL+ C G GGA GGG C+ CGKPGH AR C +
Sbjct: 55 GQEGHLSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPE 97
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G G C+ CG+ GH+A C A +C+NCG GH +REC + N
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAP----TCYNCGLSGHLSRECPQPKN 48
>gi|115704753|ref|XP_786898.2| PREDICTED: DNA-binding protein HEXBP-like isoform 2
[Strongylocentrotus purpuratus]
Length = 186
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR---- 215
CYNCG P H +RDCP+ C+ CG GH+ARDC + G GGGGG
Sbjct: 35 CYNCGQPGHISRDCPQGDSRGGGRGGGDRSCYNCGEPGHIARDCSSGGRGGGGGRGGSDR 94
Query: 216 -CYNCGKSGHLARDC--------GAGGAGGGGSCFNCGKPGHFARECTK 255
CY CG + H+AR+C G G GG +C+NCG+PGH +R+C +
Sbjct: 95 ACYGCGATDHMARECPNSKGDSRGGGRGGGDRTCYNCGQPGHISRDCPQ 143
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG-CYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
CYNC GH++R+C CYNCG+P H ARDC G S
Sbjct: 34 TCYNCGQPGHISRDCPQGDSRGGGRGGGDRSCYNCGEPGHIARDCSSGGRGGGGGRGGSD 93
Query: 189 -GCFKCGGYGHLARDCI------TRGSGGGGGGRCYNCGKSGHLARDC--------GAGG 233
C+ CG H+AR+C G GGG CYNCG+ GH++RDC G G
Sbjct: 94 RACYGCGATDHMARECPNSKGDSRGGGRGGGDRTCYNCGQPGHISRDCPQGDSRGGGGGR 153
Query: 234 AGGGGSCFNCGKPGHFARECT 254
GG +C+ CG GH +R+C+
Sbjct: 154 GGGDRTCYKCGITGHISRDCS 174
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG--GCYNCGDPEHFARDCP--RQQGGSNSYNNN 186
CYNC GH+AR+C+S R CY CG +H AR+CP +
Sbjct: 65 CYNCGEPGHIARDCSSGGRGGGGGRGGSDRACYGCGATDHMARECPNSKGDSRGGGRGGG 124
Query: 187 SGGCFKCGGYGHLARDCIT------RGSGGGGGGRCYNCGKSGHLARDCGAGG 233
C+ CG GH++RDC G GGG CY CG +GH++RDC GG
Sbjct: 125 DRTCYNCGQPGHISRDCPQGDSRGGGGGRGGGDRTCYKCGITGHISRDCSNGG 177
>gi|407716611|ref|YP_006837891.1| cold shock-like protein [Cycloclasticus sp. P1]
gi|407256947|gb|AFT67388.1| Cold shock-like protein [Cycloclasticus sp. P1]
Length = 71
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WF+ +KG+GFI+PD GG D+FVH ++I+ DG+RTL ENQ+VEF + + D
Sbjct: 4 RVRGIVKWFNNSKGFGFIQPDAGGEDVFVHFRAIQGDGFRTLKENQAVEFTIT-KGDKGL 62
Query: 66 QALDVTA 72
QA +VT
Sbjct: 63 QAEEVTG 69
>gi|374613317|ref|ZP_09686086.1| cold-shock DNA-binding domain protein [Mycobacterium tusciae
JS617]
gi|373546286|gb|EHP73059.1| cold-shock DNA-binding domain protein [Mycobacterium tusciae
JS617]
Length = 93
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
S G V WF+ KG+GFI PD G D+FVH I+S+GYR+L ENQ V+FDV G Q
Sbjct: 28 SEGTVKWFNSEKGFGFITPDGGEKDVFVHHSEIQSNGYRSLDENQRVKFDVTQGPKGP-Q 86
Query: 67 ALDVTA 72
A+ VTA
Sbjct: 87 AVGVTA 92
>gi|451344351|ref|ZP_21913411.1| cold shock-like protein CspD [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337065|gb|EMD16233.1| cold shock-like protein CspD [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 68
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TGKV WF KGYGFI +D D+FVH +I SDG+RTL E Q+V FD+ +E D Q
Sbjct: 2 TTGKVKWFKADKGYGFITVEDQSKDIFVHYSAINSDGFRTLEEGQTVSFDI-VEGDRGPQ 60
Query: 67 ALDVT 71
A +VT
Sbjct: 61 ASNVT 65
>gi|261211013|ref|ZP_05925303.1| cold shock protein CspA [Vibrio sp. RC341]
gi|260839988|gb|EEX66588.1| cold shock protein CspA [Vibrio sp. RC341]
Length = 70
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+GGADLFVH KSI SDG++TL E Q V F+V+ G
Sbjct: 4 KTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDGFKTLAEGQKVAFNVEQGNKGP- 62
Query: 66 QALDVT 71
QA +VT
Sbjct: 63 QAANVT 68
>gi|440764932|ref|ZP_20943955.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440768346|ref|ZP_20947319.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440774795|ref|ZP_20953682.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436413018|gb|ELP10956.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436415069|gb|ELP12991.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436418226|gb|ELP16112.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
Length = 70
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V+ G
Sbjct: 3 TKITGLVKWFNPEKGFGFIMPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGP 62
Query: 65 YQALDVTA 72
A++V A
Sbjct: 63 -SAVNVVA 69
>gi|269139181|ref|YP_003295882.1| cold shock protein [Edwardsiella tarda EIB202]
gi|387867787|ref|YP_005699256.1| Cold shock protein [Edwardsiella tarda FL6-60]
gi|267984842|gb|ACY84671.1| cold shock protein [Edwardsiella tarda EIB202]
gi|304559100|gb|ADM41764.1| Cold shock protein [Edwardsiella tarda FL6-60]
Length = 69
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ TG+V WF+ +KG+GFI P DG D+FVH +I++DG++TL E Q VEF +Q G
Sbjct: 1 MSKKTGQVKWFNESKGFGFITPADGSKDVFVHFSAIQNDGFKTLAEGQQVEFSIQDSPRG 60
Query: 64 KYQALDVTA 72
A DV A
Sbjct: 61 P-AAADVVA 68
>gi|354622939|ref|NP_001133217.2| zinc finger protein 9 [Salmo salar]
gi|221220712|gb|ACM09017.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 167
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CY+CG H ARDC + N
Sbjct: 63 ACYNCHRSGHISRDCKEPKKE-----REQCCYSCGKAGHVARDCD---------HANEQK 108
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+ CG GH
Sbjct: 109 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASEV---NCYKCGNTGHL 157
Query: 250 ARECTKVAN 258
A+ECT A
Sbjct: 158 AKECTIEAT 166
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------CFKCGGYGHLARDCITRG 207
++S C+ CG P H+ ++CP + GS G C++CG GH+ARDC
Sbjct: 4 SSSSECFRCGRPGHWIKNCP--EAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTE 61
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C++CGK GH AR+C
Sbjct: 62 DA------CYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDC 101
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 13/80 (16%)
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGR---------CYNCGKSGHLARDCGAGGAG 235
++S CF+CG GH ++C GSGG G GR CY CG+ GH+ARDC
Sbjct: 4 SSSSECFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDC----EQ 59
Query: 236 GGGSCFNCGKPGHFARECTK 255
+C+NC + GH +R+C +
Sbjct: 60 TEDACYNCHRSGHISRDCKE 79
>gi|348174397|ref|ZP_08881291.1| cold-shock DNA-binding domain-containing protein
[Saccharopolyspora spinosa NRRL 18395]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TGKV WF+ KGYGFI PD GGAD+F H +I+S G+RTL E Q VEF++
Sbjct: 2 ATGKVKWFNAEKGYGFITPDGGGADVFAHYSAIQSTGFRTLEEEQRVEFEI 52
>gi|145225805|ref|YP_001136483.1| cold-shock DNA-binding domain-containing protein [Mycobacterium
gilvum PYR-GCK]
gi|315442490|ref|YP_004075369.1| cold-shock DNA-binding protein family [Mycobacterium gilvum
Spyr1]
gi|145218291|gb|ABP47695.1| cold-shock DNA-binding protein family [Mycobacterium gilvum
PYR-GCK]
gi|315260793|gb|ADT97534.1| cold-shock DNA-binding protein family [Mycobacterium gilvum
Spyr1]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ G V WF+G KG+GFI PDDG D+FVH I GYR+L ENQ VEF+V+
Sbjct: 2 AQGTVKWFNGEKGFGFIAPDDGSKDVFVHYSEISGSGYRSLEENQRVEFEVE 53
>gi|296135805|ref|YP_003643047.1| cold-shock protein [Thiomonas intermedia K12]
gi|410693546|ref|YP_003624167.1| Cold shock protein [Thiomonas sp. 3As]
gi|294339970|emb|CAZ88333.1| Cold shock protein [Thiomonas sp. 3As]
gi|295795927|gb|ADG30717.1| cold-shock DNA-binding domain protein [Thiomonas intermedia K12]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ +KG+GFI+PD+GG DLF H I++ G+RTL ENQ VEF V+ G
Sbjct: 2 ATGTVKWFNESKGFGFIKPDEGGEDLFAHFSEIQAKGFRTLQENQRVEFTVKAGPKG 58
>gi|146104184|ref|XP_001469753.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|398024250|ref|XP_003865286.1| poly-zinc finger protein 2, putative [Leishmania donovani]
gi|134074123|emb|CAM72865.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|322503523|emb|CBZ38609.1| poly-zinc finger protein 2, putative [Leishmania donovani]
Length = 135
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 60/146 (41%), Gaps = 35/146 (23%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +RECTS +S C+ CG P H A++C ++
Sbjct: 1 MVCYRCGGVGHQSRECTSA-------ADSAPCFRCGKPGHVAKEC------VSTITAEEA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC------------------- 229
CF C GH ARDC CYNC + GH+A +C
Sbjct: 48 PCFYCQKPGHRARDC-PEAPPKSETVMCYNCSQKGHIASECTNPAHCYLCNEDGHIGRSC 106
Query: 230 --GAGGAGGGGSCFNCGKPGHFAREC 253
+ +C CGK GH ++C
Sbjct: 107 PTAPKRSAADKTCRKCGKKGHLRKDC 132
>gi|449065756|ref|YP_007432839.1| cold shock protein A [Mycobacterium bovis BCG str. Korea 1168P]
gi|449034264|gb|AGE69691.1| cold shock protein A [Mycobacterium bovis BCG str. Korea 1168P]
Length = 91
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
G V WF+ KG+GFI P+DG AD+FVH I+ G+RTL ENQ VEF++
Sbjct: 28 GTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEI 76
>gi|399218431|emb|CCF75318.1| unnamed protein product [Babesia microti strain RI]
Length = 111
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ R +GK WF+ KGYGFI + G D+FVHQ I + G+R+L EN+ VE +V + D
Sbjct: 1 MVRLSGKCKWFNSIKGYGFITLE-TGEDVFVHQSEIHAVGFRSLAENEPVELEV-INEDN 58
Query: 64 KYQALDVTAPGGAPVHSSKNNNTNNNSGYNNNRGG-RGGGGAG 105
+ +A+ VT P G V + ++T N G+N G R G G+G
Sbjct: 59 RKKAVKVTGPKGDYVKGA--DDTRYNDGFNPRSSGYRSGNGSG 99
>gi|242247059|ref|NP_001156049.1| zinc finger protein-like [Acyrthosiphon pisum]
gi|239789225|dbj|BAH71250.1| ACYPI000340 [Acyrthosiphon pisum]
Length = 202
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 68/167 (40%), Gaps = 50/167 (29%)
Query: 127 GGVVCYNCDGVGHVARECTSN-------------------RRNSNYNNNSGGCYNCGDPE 167
GV+CY C+ GH AR+C + ++ CY C
Sbjct: 3 AGVMCYRCNRSGHFARDCRDSGSVSSATFSRGGRGGGERGGIGGGSSDRETNCYKCNRSG 62
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
H ARDC + C++C G GH+ARDC S CYNC K+GHLAR
Sbjct: 63 HIARDCK-----------DKDRCYRCDGVGHIARDC----SQSASEPSCYNCRKTGHLAR 107
Query: 228 DCGAGGA----------------GGGGSCFNCGKPGHFARECTKVAN 258
+C A G +C+NC K GHF+R+C + N
Sbjct: 108 ECPDERADRGSGGGMGGGGMGGGGSSSTCYNCNKIGHFSRDCMESRN 154
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 65/164 (39%), Gaps = 57/164 (34%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+ GH+AR+C R CY C H ARDC S + + C
Sbjct: 55 CYKCNRSGHIARDCKDKDR----------CYRCDGVGHIARDC--------SQSASEPSC 96
Query: 191 FKCGGYGHLARDCITRGS--------------GGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ C GHLAR+C + GGG CYNC K GH +RDC GG
Sbjct: 97 YNCRKTGHLARECPDERADRGSGGGMGGGGMGGGGSSSTCYNCNKIGHFSRDCMESRNGG 156
Query: 237 GG-------------------------SCFNCGKPGHFARECTK 255
G SC+NCG+ GH +REC K
Sbjct: 157 SGNYSALCRNCNGSGHMARDCPEGNKQSCYNCGEQGHLSRECRK 200
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC+ +GH +R+C +R N N S C NC H ARDCP N
Sbjct: 135 TCYNCNKIGHFSRDCMESR-NGGSGNYSALCRNCNGSGHMARDCP---------EGNKQS 184
Query: 190 CFKCGGYGHLARDCITR 206
C+ CG GHL+R+C R
Sbjct: 185 CYNCGEQGHLSRECRKR 201
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 115 DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
D + GG G +C NC+G GH+AR+C N CYNCG+ H +R+C
Sbjct: 148 DCMESRNGGSGNYSALCRNCNGSGHMARDCPEG--------NKQSCYNCGEQGHLSRECR 199
Query: 175 RQ 176
++
Sbjct: 200 KR 201
>gi|424945530|ref|ZP_18361226.1| cold shock protein A [Mycobacterium tuberculosis NCGM2209]
gi|358230045|dbj|GAA43537.1| cold shock protein A [Mycobacterium tuberculosis NCGM2209]
Length = 91
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
G V WF+ KG+GFI P+DG AD+FVH I+ G+RTL ENQ VEF++
Sbjct: 28 GTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEI 76
>gi|83645150|ref|YP_433585.1| cold shock protein [Hahella chejuensis KCTC 2396]
gi|83633193|gb|ABC29160.1| Cold shock protein [Hahella chejuensis KCTC 2396]
Length = 116
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 9 GKVTWFDGAKGYGFIRPDDG-----GADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
GKV WF+ AKGYGFI D+G DLFVH SI+ +GY+TL Q+V FD Q G
Sbjct: 4 GKVKWFNNAKGYGFIIADEGNGDLCKEDLFVHFSSIQMEGYKTLKAGQAVNFDAQPSGKG 63
Query: 64 KYQALDVTAPGGAPVHSSKNNNTNNNSG 91
+ A+++ P SSKN T G
Sbjct: 64 -FHAVNIVPLESEPEKSSKNPETETAEG 90
>gi|343427250|emb|CBQ70778.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 180
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ-------GGSNSY 183
C+NC GH + C + R + CYNCG H DCP GG
Sbjct: 27 CFNCLEAGHESSACPAPR-----TTETKQCYNCGGKGHIKADCPTIDTQECYGCGGKGHV 81
Query: 184 NNN------SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG 237
N CF CGG GH+ +C T SGG G C CG H ARDC A GA G
Sbjct: 82 KANCPTVDREKKCFGCGGTGHVRANCATVRSGGRAGLTCRKCGGPNHFARDCKADGAANG 141
Query: 238 ---GSCFNCGKPGHFARECTKV 256
+C+ C + GH AR C +
Sbjct: 142 VKAKTCYTCNQTGHIARLCPQA 163
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
GC+ CG GHLA +C RC+NC ++GH + C A C+NCG GH
Sbjct: 6 GCYVCGQLGHLAENCSFTDR------RCFNCLEAGHESSACPAPRTTETKQCYNCGGKGH 59
Query: 249 FARECTKV 256
+C +
Sbjct: 60 IKADCPTI 67
>gi|354622941|ref|NP_001135177.2| zinc finger protein 9 [Salmo salar]
gi|221219922|gb|ACM08622.1| Cellular nucleic acid-binding protein [Salmo salar]
gi|221219978|gb|ACM08650.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 164
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++R+C ++ CY+CG H ARDC + N C
Sbjct: 61 CYNCHRSGHISRDCKEPKKE-----REQCCYSCGKAGHVARDCD---------HANEQKC 106
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG+GH+ + C +CY CG+ GH+A C +C+ CG GH A
Sbjct: 107 YSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASEV---NCYKCGNTGHLA 155
Query: 251 RECTKVAN 258
+ECT A
Sbjct: 156 KECTIEAT 163
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---CFKCGGYGHLARDCITRGSGGGG 212
+S C+ CG P H+ ++CP G G C++CG GH+ARDC
Sbjct: 4 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDA--- 60
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C++CGK GH AR+C
Sbjct: 61 ---CYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDC 98
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR-------CYNCGKSGHLARDCGAGGAGGGG 238
+S CF+CG GH ++C G G G GR CY CG+ GH+ARDC
Sbjct: 4 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDC----EQTED 59
Query: 239 SCFNCGKPGHFARECTK 255
+C+NC + GH +R+C +
Sbjct: 60 ACYNCHRSGHISRDCKE 76
>gi|383782900|ref|YP_005467467.1| putative cold-shock DNA-binding domain protein [Actinoplanes
missouriensis 431]
gi|381376133|dbj|BAL92951.1| putative cold-shock DNA-binding domain protein [Actinoplanes
missouriensis 431]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDGGAD+F H +I + GYR+L ENQ VEFD+
Sbjct: 2 TTGTVKWFNADKGFGFISPDDGGADVFAHFSAIATSGYRSLEENQKVEFDI 52
>gi|372266435|ref|ZP_09502483.1| cold-shock protein CspD [Alteromonas sp. S89]
Length = 95
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKGYGFI D+GG DLF H +I+ +GYRTL Q V+FD+ ++ D Y A
Sbjct: 3 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAIQMEGYRTLKAGQQVQFDI-IQGDKGYHA 61
Query: 68 LDVTA 72
+++A
Sbjct: 62 ANISA 66
>gi|21537255|gb|AAM61596.1| DNA-binding protein [Arabidopsis thaliana]
Length = 254
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGG 179
G +C NC GH AR+C+ N C NCG P H A +C R+ G
Sbjct: 51 GNLCNNCKRPGHFARDCS----------NVSVCNNCGLPGHIAAECTAESRCWNCREPGH 100
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
S +N G C CG GH ARDC S G C NC K GHLA DC A
Sbjct: 101 VASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKA----- 155
Query: 240 CFNCGKPGHFAREC 253
C NC GH AR+C
Sbjct: 156 CKNCRTSGHIARDC 169
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NC P HFARDC +N C CG GH+A +C RC+NC
Sbjct: 54 CNNCKRPGHFARDC-----------SNVSVCNNCGLPGHIAAECTAES-------RCWNC 95
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
+ GH+A +C G C +CGK GH AR+C+
Sbjct: 96 REPGHVASNCS-----NEGICHSCGKSGHRARDCS 125
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G C NC + GH ARDC C NCG PGH A ECT
Sbjct: 51 GNLCNNCKRPGHFARDCSNVSV-----CNNCGLPGHIAAECT 87
>gi|18410883|ref|NP_565112.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|145327705|ref|NP_001077828.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|26451654|dbj|BAC42924.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|28973609|gb|AAO64129.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|51968528|dbj|BAD42956.1| DNA-binding protein [Arabidopsis thaliana]
gi|51968680|dbj|BAD43032.1| DNA-binding protein [Arabidopsis thaliana]
gi|51968750|dbj|BAD43067.1| DNA-binding protein [Arabidopsis thaliana]
gi|51969824|dbj|BAD43604.1| DNA-binding protein [Arabidopsis thaliana]
gi|51970558|dbj|BAD43971.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971174|dbj|BAD44279.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971429|dbj|BAD44379.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971449|dbj|BAD44389.1| DNA-binding protein [Arabidopsis thaliana]
gi|332197612|gb|AEE35733.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|332197613|gb|AEE35734.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 257
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGG 179
G +C NC GH AR+C+ N C NCG P H A +C R+ G
Sbjct: 54 GNLCNNCKRPGHFARDCS----------NVSVCNNCGLPGHIAAECTAESRCWNCREPGH 103
Query: 180 SNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
S +N G C CG GH ARDC S G C NC K GHLA DC A
Sbjct: 104 VASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKA----- 158
Query: 240 CFNCGKPGHFAREC 253
C NC GH AR+C
Sbjct: 159 CKNCRTSGHIARDC 172
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C NC P HFARDC +N C CG GH+A +C RC+NC
Sbjct: 57 CNNCKRPGHFARDC-----------SNVSVCNNCGLPGHIAAECTAES-------RCWNC 98
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
+ GH+A +C G C +CGK GH AR+C+
Sbjct: 99 REPGHVASNCS-----NEGICHSCGKSGHRARDCS 128
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G C NC + GH ARDC C NCG PGH A ECT
Sbjct: 54 GNLCNNCKRPGHFARDCSNVSV-----CNNCGLPGHIAAECT 90
>gi|380489650|emb|CCF36563.1| cellular nucleic acid-binding protein [Colletotrichum higginsianum]
Length = 275
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 79/193 (40%), Gaps = 15/193 (7%)
Query: 68 LDVTAPGGAPVHSSKNNNTNNNSGYN-----NNRGGRGGGGAGFGGYWKGNNDSRRNNGG 122
L T AP H++ + N Y + + R A + + N + G
Sbjct: 5 LIATERVLAPTHTNMDLQGNLEKKYTVQYRFSAQPDRQREKAAWPSSPEENMARLEDAGE 64
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNS 182
C NC+ +GH+++ C + + CYNCG+ H RDCP +
Sbjct: 65 PVSRLMQKCSNCNELGHISKSCP--QEAMEKARVTITCYNCGEEGHRVRDCP-------T 115
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+ C CG GH +C G C C + GH +RDC GG GGG +C N
Sbjct: 116 PRVDKFACKNCGQSGHKVSEC-PEPRKAGADVECNKCHEMGHFSRDCPQGGGGGGRACHN 174
Query: 243 CGKPGHFARECTK 255
CG GH +REC +
Sbjct: 175 CGNEGHMSRECPE 187
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CYNC GH R+C + R + C NCG H +CP +
Sbjct: 98 ITCYNCGEEGHRVRDCPTPRV------DKFACKNCGQSGHKVSECPEPRKAGADVE---- 147
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH +RDC G GGG C+NCG GH++R+C C NC + GH
Sbjct: 148 -CNKCHEMGHFSRDCPQGGGGGGRA--CHNCGNEGHMSRECPEPRK---IKCRNCDEEGH 201
Query: 249 FARECTK 255
+++C K
Sbjct: 202 LSKDCDK 208
>gi|341875989|gb|EGT31924.1| hypothetical protein CAEBREN_06592 [Caenorhabditis brenneri]
Length = 395
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
C++C +P H DCP++ +++ G CFKCG H +C +G G C+
Sbjct: 233 SACFHCREPGHRLADCPKRNS-----SHSDGVCFKCGSMEHSIHECKKKGVKGFPFATCF 287
Query: 218 NCGKSGHLARDCGA---GGAGGGGSCFNCGKPGHFARECTKVA 257
C + GH++RDC G GG+C CG GH R+C ++A
Sbjct: 288 VCKQVGHISRDCHQNLNGVYPDGGACNVCGAVGHLKRDCPELA 330
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 110 WKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
WK ++RR G C++C GH +C +RNS++++ G C+ CG EH
Sbjct: 215 WK-TRETRRVGRQEQKITGSACFHCREPGHRLADCP--KRNSSHSD--GVCFKCGSMEHS 269
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARD 228
+C ++ + CF C GH++RDC +G GG C CG GHL RD
Sbjct: 270 IHECKKKGVKGFPF----ATCFVCKQVGHISRDCHQNLNGVYPDGGACNVCGAVGHLKRD 325
Query: 229 CGAGGAGGGGSCFNCGKPGHF-ARECT 254
C A G FN K HF AR T
Sbjct: 326 CPELAAQKAGGAFNQKK--HFTARAAT 350
>gi|295696558|ref|YP_003589796.1| cold-shock DNA-binding domain-containing protein [Kyrpidia
tusciae DSM 2912]
gi|295412160|gb|ADG06652.1| cold-shock DNA-binding domain protein [Kyrpidia tusciae DSM 2912]
Length = 66
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
GKV WF+ KGYGFI PDDGG D+FVH +I+ +G+RTL E Q VE+D+
Sbjct: 3 GKVKWFNAEKGYGFITPDDGGKDVFVHYSAIQEEGFRTLEEGQDVEYDI 51
>gi|242032467|ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
gi|241917482|gb|EER90626.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
Length = 258
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ--------QGGS 180
+VC NC GH A+EC S + C NC P HFA +C Q G
Sbjct: 61 LVCKNCRRPGHFAKECPS----------APTCNNCNLPGHFAAECTSQTICWNCKESGHI 110
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
S N C C GHLARDC T G+ +C+ K GH A DC A C
Sbjct: 111 ASECKNEALCHTCNKTGHLARDCPTSGANVKLCNKCF---KPGHFAVDCTNERA-----C 162
Query: 241 FNCGKPGHFAREC 253
NC +PGH AREC
Sbjct: 163 NNCRQPGHIAREC 175
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 160 CYNCGDPEHFARDCPRQQGGSN--------SYNNNSGGCFKCGGYGHLARDCITRGSGGG 211
C NC P HFA++CP +N + + C+ C GH+A +C
Sbjct: 63 CKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTSQTICWNCKESGHIASEC-------K 115
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C+ C K+GHLARDC GA C C KPGHFA +CT
Sbjct: 116 NEALCHTCNKTGHLARDCPTSGA-NVKLCNKCFKPGHFAVDCT 157
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGGSN 181
+C+ C+ GH+AR+C ++ N C C P HFA DC RQ G
Sbjct: 119 LCHTCNKTGHLARDCPTSGANVKL------CNKCFKPGHFAVDCTNERACNNCRQPGHIA 172
Query: 182 SYNNNSGGCFKCGGYGHLARDC--ITRGSGGGGGG----RCYNCGKSGHLARDCGAGGAG 235
N C C GH+AR C T S GG C CG+ GH++R+C A
Sbjct: 173 RECKNDPVCNLCNVSGHVARVCPKTTLASEIQGGPFRDILCRICGQPGHISRNCIATII- 231
Query: 236 GGGSCFNCGKPGHFAREC 253
C CG GH + EC
Sbjct: 232 ----CDTCGGRGHMSYEC 245
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 46/108 (42%), Gaps = 27/108 (25%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NC GH+AREC N N N SG H AR CP+ S GG
Sbjct: 162 CNNCRQPGHIAREC-KNDPVCNLCNVSG---------HVARVCPKTTLASEI----QGGP 207
Query: 191 FK------CGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
F+ CG GH++R+CI GGR GH++ +C +
Sbjct: 208 FRDILCRICGQPGHISRNCIATIICDTCGGR-------GHMSYECPSA 248
>gi|172041529|ref|YP_001801243.1| cold shock protein [Corynebacterium urealyticum DSM 7109]
gi|448824446|ref|YP_007417618.1| putative cold shock protein [Corynebacterium urealyticum DSM
7111]
gi|171852833|emb|CAQ05809.1| putative cold shock protein [Corynebacterium urealyticum DSM
7109]
gi|448277943|gb|AGE37367.1| putative cold shock protein [Corynebacterium urealyticum DSM
7111]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 40/57 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ G V WF+ KGYGFI P+DG ADLFVH I+S G+RTL E+Q VEF+V A G
Sbjct: 2 AQGTVKWFNAEKGYGFIAPEDGSADLFVHYSEIQSSGFRTLEEDQKVEFEVGEGAKG 58
>gi|293395718|ref|ZP_06640000.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291421655|gb|EFE94902.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 69
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+T+ TG V WF+ +KG+GFI P DG D+FVH +I SDG++TL E Q VEF +Q
Sbjct: 1 MTKITGHVKWFNESKGFGFITPADGSKDVFVHFSAIVSDGFKTLAEGQQVEFSIQ 55
>gi|115461691|ref|NP_001054445.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|52353639|gb|AAU44205.1| unknown protein [Oryza sativa Japonica Group]
gi|113577996|dbj|BAF16359.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|222629944|gb|EEE62076.1| hypothetical protein OsJ_16860 [Oryza sativa Japonica Group]
Length = 951
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
N S C+KC GH ARDC + +GG C+ C + GH +RDC GG CF C
Sbjct: 856 NGSSECYKCKQPGHYARDCPGQSTGGL---ECFKCKQPGHFSRDCPVQSTGGS-ECFKCK 911
Query: 245 KPGHFAREC 253
+PGHFAR+C
Sbjct: 912 QPGHFARDC 920
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 152 NYN----NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
NYN N S CY C P H+ARDCP Q G CFKC GH +RDC +
Sbjct: 849 NYNSIAGNGSSECYKCKQPGHYARDCPGQSTGGLE-------CFKCKQPGHFSRDCPVQS 901
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ GG C+ C + GH ARDC G
Sbjct: 902 T---GGSECFKCKQPGHFARDCPGQSTGA 927
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGS 180
G GG+ C+ C GH +R+C ++GG C+ C P HFARDCP Q G+
Sbjct: 876 GQSTGGLECFKCKQPGHFSRDCPVQ--------STGGSECFKCKQPGHFARDCPGQSTGA 927
Query: 181 --NSYNNNSGG 189
+Y NN
Sbjct: 928 QHQTYGNNVAA 938
>gi|417538538|ref|ZP_12191099.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353666302|gb|EHD04157.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 70
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V+ G
Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGLKGP 62
Query: 65 YQALDVTA 72
A++V A
Sbjct: 63 -SAVNVVA 69
>gi|258620199|ref|ZP_05715238.1| cold shock transcriptional regulator [Vibrio mimicus VM573]
gi|258624440|ref|ZP_05719387.1| cold shock transcriptional regulator CspA [Vibrio mimicus VM603]
gi|262171708|ref|ZP_06039386.1| cold shock protein CspA [Vibrio mimicus MB-451]
gi|424807745|ref|ZP_18233147.1| cold shock transcriptional regulator CspA [Vibrio mimicus SX-4]
gi|258583287|gb|EEW08089.1| cold shock transcriptional regulator CspA [Vibrio mimicus VM603]
gi|258587557|gb|EEW12267.1| cold shock transcriptional regulator [Vibrio mimicus VM573]
gi|261892784|gb|EEY38770.1| cold shock protein CspA [Vibrio mimicus MB-451]
gi|342324282|gb|EGU20063.1| cold shock transcriptional regulator CspA [Vibrio mimicus SX-4]
Length = 70
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+GGADLFVH KSI SDG++TL E Q V F+V+ G
Sbjct: 4 KTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDGFKTLSEGQKVAFNVEQGNKGP- 62
Query: 66 QALDVT 71
QA +VT
Sbjct: 63 QAANVT 68
>gi|218195961|gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCG 244
N S C+KC GH ARDC + +GG C+ C + GH +RDC GG CF C
Sbjct: 893 NGSSECYKCKQPGHYARDCPGQSTGGL---ECFKCKQPGHFSRDCPVQSTGGS-ECFKCK 948
Query: 245 KPGHFAREC 253
+PGHFAR+C
Sbjct: 949 QPGHFARDC 957
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 152 NYN----NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
NYN N S CY C P H+ARDCP Q G CFKC GH +RDC +
Sbjct: 886 NYNSIAGNGSSECYKCKQPGHYARDCPGQSTGGLE-------CFKCKQPGHFSRDCPVQS 938
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ GG C+ C + GH ARDC G
Sbjct: 939 T---GGSECFKCKQPGHFARDCPGQSTGA 964
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 123 GYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGS 180
G GG+ C+ C GH +R+C ++GG C+ C P HFARDCP Q G+
Sbjct: 913 GQSTGGLECFKCKQPGHFSRDCPVQ--------STGGSECFKCKQPGHFARDCPGQSTGA 964
Query: 181 --NSYNNNSGG 189
+Y NN
Sbjct: 965 QHQTYGNNVAA 975
>gi|262165515|ref|ZP_06033252.1| cold shock protein CspA [Vibrio mimicus VM223]
gi|262402390|ref|ZP_06078951.1| cold shock protein CspA [Vibrio sp. RC586]
gi|449145212|ref|ZP_21776021.1| cold-shock protein [Vibrio mimicus CAIM 602]
gi|262025231|gb|EEY43899.1| cold shock protein CspA [Vibrio mimicus VM223]
gi|262351172|gb|EEZ00305.1| cold shock protein CspA [Vibrio sp. RC586]
gi|449079248|gb|EMB50173.1| cold-shock protein [Vibrio mimicus CAIM 602]
Length = 70
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+GGADLFVH KSI SDG++TL E Q V F+V+ G
Sbjct: 4 KTTGLVKWFNETKGFGFITPDNGGADLFVHFKSIVSDGFKTLAEGQKVAFNVEQGNKGP- 62
Query: 66 QALDVT 71
QA +VT
Sbjct: 63 QAANVT 68
>gi|197632621|gb|ACH71034.1| zinc finger protein 9-1 [Salmo salar]
Length = 165
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CYNC GH++R+C ++ CY+CG H ARDC + N
Sbjct: 61 ACYNCHRSGHISRDCKEPKKE-----REQCCYSCGKAGHVARDCD---------HANEQK 106
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG+GH+ + C +CY CG+ GH+A C +C+ CG GH
Sbjct: 107 CYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASEV---NCYKCGNTGHL 155
Query: 250 ARECTKVAN 258
A+ECT A
Sbjct: 156 AKECTIEAT 164
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------CFKCGGYGHLARDCITRG 207
++S C+ CG P H+ ++CP + GS G C++CG GH+ARDC
Sbjct: 2 SSSSECFRCGRPGHWIKNCP--EAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTE 59
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C++CGK GH AR+C
Sbjct: 60 DA------CYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDC 99
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 13/80 (16%)
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGGR---------CYNCGKSGHLARDCGAGGAG 235
++S CF+CG GH ++C GSGG G GR CY CG+ GH+ARDC
Sbjct: 2 SSSSECFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDC----EQ 57
Query: 236 GGGSCFNCGKPGHFARECTK 255
+C+NC + GH +R+C +
Sbjct: 58 TEDACYNCHRSGHISRDCKE 77
>gi|242017353|ref|XP_002429154.1| cellular nucleic acid binding protein, putative [Pediculus humanus
corporis]
gi|212514027|gb|EEB16416.1| cellular nucleic acid binding protein, putative [Pediculus humanus
corporis]
Length = 131
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-----------CFKCGGYGHLARDCI 204
++G CY C HFAR CP Q GG S N G CFKC YGH AR+CI
Sbjct: 2 STGLCYKCHQSGHFARLCP-QGGGDRSSRGNRDGGNFGRGGGRDKCFKCNRYGHFARECI 60
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
RCY+C GH+ARDC + SC+NC K GH AR C +
Sbjct: 61 EEKD------RCYHCNAVGHIARDCPQPSS--EPSCYNCNKTGHIARNCPE 103
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 65/137 (47%), Gaps = 28/137 (20%)
Query: 130 VCYNCDGVGHVARECT------SNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQG 178
+CY C GH AR C S+R N + N G C+ C HFAR+C ++
Sbjct: 5 LCYKCHQSGHFARLCPQGGGDRSSRGNRDGGNFGRGGGRDKCFKCNRYGHFARECIEEK- 63
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
C+ C GH+ARDC S CYNC K+GH+AR+C G
Sbjct: 64 ---------DRCYHCNAVGHIARDCPQPSSEPS----CYNCNKTGHIARNCPEGSL---K 107
Query: 239 SCFNCGKPGHFARECTK 255
SC++CGK GH +R C +
Sbjct: 108 SCYSCGKTGHISRHCDQ 124
>gi|442318742|ref|YP_007358763.1| cold-shock protein CspA [Myxococcus stipitatus DSM 14675]
gi|441486384|gb|AGC43079.1| cold-shock protein CspA [Myxococcus stipitatus DSM 14675]
Length = 82
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG V WF+ AKG+GFI D+GG D+F H +I++DG+RTL E Q VEFDV+
Sbjct: 16 ATGTVKWFNDAKGFGFIAQDNGGPDVFCHHTAIQADGFRTLAEGQKVEFDVK 67
>gi|41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|41052743|dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|125580606|gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group]
gi|187609561|gb|ACD13288.1| cold shock domain protein 1 [Oryza sativa Japonica Group]
gi|215767546|dbj|BAG99774.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 65/116 (56%), Gaps = 20/116 (17%)
Query: 160 CYNCGDPEHFARDC-----PRQQGGSNSYNNNSGGCFKCGGYGHLARDCI------TRGS 208
C+ CG+ H ARDC GG GGCFKCG GH+ARDC G
Sbjct: 126 CFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKCGEMGHMARDCFNSGGGGGGGG 185
Query: 209 GGGGGGRCYNCGKSGHLARDC---------GAGGAGGGGSCFNCGKPGHFARECTK 255
GGGGGG CYNCG++GHLARDC G G GG SC+NCG+ GH AR+C K
Sbjct: 186 GGGGGGACYNCGETGHLARDCYNGGGGGGGGRFGGGGDRSCYNCGEAGHIARDCHK 241
>gi|377561332|ref|ZP_09790790.1| putative cold shock protein [Gordonia otitidis NBRC 100426]
gi|441508089|ref|ZP_20990014.1| putative cold shock protein [Gordonia aichiensis NBRC 108223]
gi|377521520|dbj|GAB35955.1| putative cold shock protein [Gordonia otitidis NBRC 100426]
gi|441448016|dbj|GAC47975.1| putative cold shock protein [Gordonia aichiensis NBRC 108223]
Length = 67
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDD G D+FVH +I G+R+L E Q VEFDV+ A G Q
Sbjct: 2 TQGTVKWFNGEKGFGFIAPDDQGQDVFVHYSAITGSGFRSLEEQQRVEFDVEQGAKG-LQ 60
Query: 67 ALDVTA 72
A +VTA
Sbjct: 61 ATNVTA 66
>gi|423140576|ref|ZP_17128214.1| transcriptional repressor activity CueR [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053130|gb|EHY71021.1| transcriptional repressor activity CueR [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 70
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V+
Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFRTLNENQEVEFSVE 56
>gi|345863847|ref|ZP_08816054.1| cold-shock DNA-binding domain protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124957|gb|EGW54830.1| cold-shock DNA-binding domain protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 69
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
STG V WF+ AKGYGF+ PDDG D+FVH SI +GY+TL E Q VEF++
Sbjct: 2 STGVVKWFNNAKGYGFVTPDDGDVDIFVHFSSITMEGYKTLKEGQKVEFEI 52
>gi|195619936|gb|ACG31798.1| cellular nucleic acid-binding protein [Zea mays]
gi|414873648|tpg|DAA52205.1| TPA: cellular nucleic acid-binding protein [Zea mays]
Length = 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 59/131 (45%), Gaps = 26/131 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ--------QGGSNS 182
C NC GH A+EC S + C NC P HFA +C Q G S
Sbjct: 61 CKNCRRPGHFAKECPS----------APMCNNCNLPGHFAAECTLQTVCWNCKESGHIAS 110
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
N C C GHLARDC T G+ +C+ KSGH+A DC A C N
Sbjct: 111 ECKNEALCHACNKTGHLARDCPTSGANVKLCNKCF---KSGHIAVDCTNERA-----CNN 162
Query: 243 CGKPGHFAREC 253
C +PGH AREC
Sbjct: 163 CRQPGHIAREC 173
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 52/128 (40%), Gaps = 29/128 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
VC+NC GH+A EC N C+ C H ARDCP + N
Sbjct: 97 TVCWNCKESGHIASEC----------KNEALCHACNKTGHLARDCP-------TSGANVK 139
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C KC GH+A DC + C NC + GH+AR+C C C GH
Sbjct: 140 LCNKCFKSGHIAVDCTNERA-------CNNCRQPGHIAREC-----KNDPVCNLCNVSGH 187
Query: 249 FARECTKV 256
AR C K
Sbjct: 188 VARVCPKT 195
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 35/143 (24%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNN-------------NSGGCYNCGDPEHFARDCPRQ 176
+C+ C+ GH+AR+C ++ N N N C NC P H AR+C
Sbjct: 117 LCHACNKTGHLARDCPTSGANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIAREC--- 173
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDC--ITRGSGGGGGG----RCYNCGKSGHLARDCG 230
N C C GH+AR C T S GG C CG+ GH++R+C
Sbjct: 174 --------KNDPVCNLCNVSGHVARVCPKTTLASVIQGGPFRDILCRICGQPGHISRNCM 225
Query: 231 AGGAGGGGSCFNCGKPGHFAREC 253
A C CG GH + EC
Sbjct: 226 ATII-----CDTCGGRGHMSYEC 243
>gi|16765332|ref|NP_460947.1| cold-shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56413093|ref|YP_150168.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161613431|ref|YP_001587396.1| hypothetical protein SPAB_01147 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197362019|ref|YP_002141656.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205352312|ref|YP_002226113.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207856492|ref|YP_002243143.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224583507|ref|YP_002637305.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238912431|ref|ZP_04656268.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|374981021|ref|ZP_09722351.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375118572|ref|ZP_09763739.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|375123109|ref|ZP_09768273.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378445382|ref|YP_005233014.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450609|ref|YP_005237968.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378699861|ref|YP_005181818.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378955560|ref|YP_005213047.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378984558|ref|YP_005247713.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378989337|ref|YP_005252501.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701176|ref|YP_005242904.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383496667|ref|YP_005397356.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386591821|ref|YP_006088221.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409249558|ref|YP_006885380.1| Cold shock-like protein cspG CPS-G [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416421750|ref|ZP_11689748.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433826|ref|ZP_11697249.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416436646|ref|ZP_11698448.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416449108|ref|ZP_11706759.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416452428|ref|ZP_11708979.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456595|ref|ZP_11711599.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416469673|ref|ZP_11718590.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475012|ref|ZP_11720414.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416493894|ref|ZP_11728038.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416498259|ref|ZP_11730185.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416504902|ref|ZP_11733484.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416512537|ref|ZP_11737820.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416527886|ref|ZP_11743534.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416535057|ref|ZP_11747421.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416542692|ref|ZP_11751758.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416549008|ref|ZP_11755178.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416562384|ref|ZP_11762084.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416566751|ref|ZP_11764003.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416579395|ref|ZP_11771253.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416585266|ref|ZP_11774819.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416589849|ref|ZP_11777365.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416601325|ref|ZP_11784989.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604268|ref|ZP_11786028.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611943|ref|ZP_11791122.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416619911|ref|ZP_11795387.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416632564|ref|ZP_11801454.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638190|ref|ZP_11803786.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416651809|ref|ZP_11811326.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416660044|ref|ZP_11814967.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416666517|ref|ZP_11817591.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416675619|ref|ZP_11821632.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690036|ref|ZP_11825711.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416705105|ref|ZP_11830717.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711094|ref|ZP_11835052.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416716962|ref|ZP_11839254.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416722097|ref|ZP_11843156.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416732144|ref|ZP_11849669.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416736006|ref|ZP_11851752.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416745490|ref|ZP_11857406.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416755487|ref|ZP_11862087.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416762975|ref|ZP_11866847.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416769477|ref|ZP_11871139.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417325583|ref|ZP_12111509.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417332928|ref|ZP_12116650.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417341011|ref|ZP_12122191.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417348298|ref|ZP_12127282.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417357307|ref|ZP_12132514.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417365062|ref|ZP_12137816.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417372605|ref|ZP_12142857.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417382703|ref|ZP_12148592.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417390013|ref|ZP_12153625.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417414699|ref|ZP_12158545.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417456860|ref|ZP_12163737.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417474459|ref|ZP_12169567.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417509688|ref|ZP_12174784.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417517644|ref|ZP_12180187.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417529622|ref|ZP_12185288.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|418483989|ref|ZP_13052993.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418492577|ref|ZP_13059059.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493831|ref|ZP_13060293.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418497504|ref|ZP_13063921.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502240|ref|ZP_13068612.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418509603|ref|ZP_13075897.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418513227|ref|ZP_13079458.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418527821|ref|ZP_13093777.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418789462|ref|ZP_13345249.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794262|ref|ZP_13349984.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418796861|ref|ZP_13352552.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418809542|ref|ZP_13365094.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813695|ref|ZP_13369216.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418814962|ref|ZP_13370470.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418822749|ref|ZP_13378160.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418826601|ref|ZP_13381805.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418830201|ref|ZP_13385164.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418836584|ref|ZP_13391468.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418840643|ref|ZP_13395472.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418844908|ref|ZP_13399694.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418850675|ref|ZP_13405391.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418853817|ref|ZP_13408502.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418858961|ref|ZP_13413570.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418863569|ref|ZP_13418107.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418868230|ref|ZP_13422673.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419730348|ref|ZP_14257294.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735364|ref|ZP_14262244.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419741131|ref|ZP_14267841.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419742402|ref|ZP_14269076.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419747311|ref|ZP_14273842.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421358534|ref|ZP_15808831.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362503|ref|ZP_15812755.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421367704|ref|ZP_15817897.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373913|ref|ZP_15824048.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421378116|ref|ZP_15828205.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421382726|ref|ZP_15832772.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421387546|ref|ZP_15837545.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391650|ref|ZP_15841616.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395146|ref|ZP_15845085.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421401412|ref|ZP_15851288.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402987|ref|ZP_15852841.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421410353|ref|ZP_15860134.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412619|ref|ZP_15862373.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421416612|ref|ZP_15866331.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421421607|ref|ZP_15871275.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425218|ref|ZP_15874854.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421432086|ref|ZP_15881663.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436498|ref|ZP_15886025.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441439|ref|ZP_15890909.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421446624|ref|ZP_15896036.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421447731|ref|ZP_15897127.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421568943|ref|ZP_16014651.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421574615|ref|ZP_16020236.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421579776|ref|ZP_16025338.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584897|ref|ZP_16030403.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421884216|ref|ZP_16315432.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422026200|ref|ZP_16372602.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422031226|ref|ZP_16377401.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427550518|ref|ZP_18927906.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427566691|ref|ZP_18932621.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427586962|ref|ZP_18937412.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427610270|ref|ZP_18942277.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427634048|ref|ZP_18947170.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656235|ref|ZP_18951935.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427661384|ref|ZP_18956848.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427669357|ref|ZP_18961649.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427769086|ref|ZP_18966836.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436789952|ref|ZP_20521421.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436793381|ref|ZP_20521660.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436811511|ref|ZP_20530391.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436815882|ref|ZP_20533433.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436839029|ref|ZP_20537349.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436851477|ref|ZP_20542076.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436858241|ref|ZP_20546761.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436865415|ref|ZP_20551382.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436875411|ref|ZP_20557318.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436883466|ref|ZP_20561895.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436887674|ref|ZP_20564003.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436896535|ref|ZP_20569291.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436906515|ref|ZP_20575361.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436911536|ref|ZP_20577365.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436921011|ref|ZP_20583482.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436930605|ref|ZP_20588830.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436935489|ref|ZP_20590929.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436942678|ref|ZP_20595624.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436951830|ref|ZP_20600885.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436964461|ref|ZP_20606097.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436971562|ref|ZP_20609955.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985632|ref|ZP_20615152.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436991400|ref|ZP_20617411.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437012385|ref|ZP_20624898.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437020644|ref|ZP_20627455.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437030064|ref|ZP_20631246.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437044825|ref|ZP_20637372.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437052537|ref|ZP_20641960.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437058008|ref|ZP_20644855.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437071004|ref|ZP_20652104.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437075700|ref|ZP_20654063.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437086737|ref|ZP_20660746.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437095286|ref|ZP_20664390.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437100506|ref|ZP_20665993.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437126084|ref|ZP_20674353.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437134421|ref|ZP_20678845.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437139666|ref|ZP_20681930.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437147195|ref|ZP_20686747.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437155487|ref|ZP_20691706.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437160049|ref|ZP_20694438.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437171597|ref|ZP_20700701.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437177429|ref|ZP_20703909.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437185698|ref|ZP_20709132.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437230879|ref|ZP_20713413.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437261064|ref|ZP_20718134.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269104|ref|ZP_20722389.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437281892|ref|ZP_20728893.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302878|ref|ZP_20733672.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437313513|ref|ZP_20736818.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437322118|ref|ZP_20738843.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437344129|ref|ZP_20746143.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437378992|ref|ZP_20750110.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437413806|ref|ZP_20753581.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437453246|ref|ZP_20759784.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437461432|ref|ZP_20762352.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437478614|ref|ZP_20767627.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437496907|ref|ZP_20773315.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437506439|ref|ZP_20775722.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437538514|ref|ZP_20782084.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437549878|ref|ZP_20783491.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437575306|ref|ZP_20790102.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437592893|ref|ZP_20795283.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437607638|ref|ZP_20800416.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437618438|ref|ZP_20803150.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437651686|ref|ZP_20809913.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437657634|ref|ZP_20811169.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437698597|ref|ZP_20823293.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437703712|ref|ZP_20824597.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437737433|ref|ZP_20832958.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437792964|ref|ZP_20837325.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437803445|ref|ZP_20838554.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437841186|ref|ZP_20846610.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437910893|ref|ZP_20850230.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|437996688|ref|ZP_20853986.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438088395|ref|ZP_20859791.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101283|ref|ZP_20864234.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438112544|ref|ZP_20869141.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438130668|ref|ZP_20873506.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445138018|ref|ZP_21383871.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445148080|ref|ZP_21388590.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445153961|ref|ZP_21391596.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445167741|ref|ZP_21394571.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445216861|ref|ZP_21402150.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445233658|ref|ZP_21406475.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445249108|ref|ZP_21408661.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445338644|ref|ZP_21416217.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445349097|ref|ZP_21419876.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445365236|ref|ZP_21425226.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452119811|ref|YP_007470059.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|325530013|sp|E1WGN1.1|CSPJ_SALTS RecName: Full=Cold shock-like protein CspJ
gi|325530014|sp|P0CL01.1|CSPJ_SALTY RecName: Full=Cold shock-like protein CspJ
gi|2961317|emb|CAA72682.1| cspB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420530|gb|AAL20906.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56127350|gb|AAV76856.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161362795|gb|ABX66563.1| hypothetical protein SPAB_01147 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197093496|emb|CAR58956.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|205272093|emb|CAR36945.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206708295|emb|CAR32598.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468034|gb|ACN45864.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247161|emb|CBG24984.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267993987|gb|ACY88872.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158509|emb|CBW18019.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912986|dbj|BAJ36960.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320085386|emb|CBY95167.1| Cold shock-like protein cspG CPS-G [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224641|gb|EFX49704.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322616988|gb|EFY13896.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618228|gb|EFY15120.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625898|gb|EFY22717.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626350|gb|EFY23160.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632765|gb|EFY29510.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639107|gb|EFY35800.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640379|gb|EFY37036.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647216|gb|EFY43715.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648415|gb|EFY44868.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655544|gb|EFY51852.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660322|gb|EFY56560.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322663003|gb|EFY59210.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668188|gb|EFY64347.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674053|gb|EFY70147.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675595|gb|EFY71669.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682994|gb|EFY79010.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322686688|gb|EFY82666.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323130275|gb|ADX17705.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323195075|gb|EFZ80259.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197875|gb|EFZ83000.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204480|gb|EFZ89486.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323210991|gb|EFZ95851.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323217555|gb|EGA02274.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222458|gb|EGA06829.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227477|gb|EGA11639.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231577|gb|EGA15690.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236020|gb|EGA20099.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240590|gb|EGA24633.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323245482|gb|EGA29482.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247600|gb|EGA31551.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323254428|gb|EGA38244.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257760|gb|EGA41440.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262133|gb|EGA45696.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266256|gb|EGA49746.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270733|gb|EGA54172.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326622839|gb|EGE29184.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|326627359|gb|EGE33702.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|332988884|gb|AEF07867.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353575620|gb|EHC38312.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353576017|gb|EHC38599.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353580211|gb|EHC41539.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353594251|gb|EHC51815.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353595512|gb|EHC52757.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353604813|gb|EHC59491.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353614113|gb|EHC66041.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353620047|gb|EHC70271.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353624884|gb|EHC73818.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353634165|gb|EHC80808.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353647481|gb|EHC90595.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353648548|gb|EHC91425.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353651214|gb|EHC93368.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353667236|gb|EHD04811.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357206171|gb|AET54217.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|357958414|gb|EHJ83045.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363554643|gb|EHL38877.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363557350|gb|EHL41557.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363566199|gb|EHL50216.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363569338|gb|EHL53298.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363570244|gb|EHL54181.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363572715|gb|EHL56603.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363579425|gb|EHL63211.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366056026|gb|EHN20357.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366059774|gb|EHN24041.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366063976|gb|EHN28187.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366075261|gb|EHN39318.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366075596|gb|EHN39648.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366078310|gb|EHN42315.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366082124|gb|EHN46061.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366827556|gb|EHN54462.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372204449|gb|EHP17977.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|379986297|emb|CCF87705.1| putative cold-shock protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380463488|gb|AFD58891.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381292704|gb|EIC33880.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381294356|gb|EIC35495.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381295128|gb|EIC36249.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381314273|gb|EIC55047.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381319583|gb|EIC60279.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383798865|gb|AFH45947.1| Cold shock protein CspG [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392760703|gb|EJA17538.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392762257|gb|EJA19073.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392770234|gb|EJA26962.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392773627|gb|EJA30323.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392774921|gb|EJA31616.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392787006|gb|EJA43554.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392793341|gb|EJA49785.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392800945|gb|EJA57175.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392802434|gb|EJA58648.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392805207|gb|EJA61340.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392811133|gb|EJA67145.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392813717|gb|EJA69681.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392818525|gb|EJA74409.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392825957|gb|EJA81691.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392831200|gb|EJA86834.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392833437|gb|EJA89052.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392838136|gb|EJA93700.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|395986224|gb|EJH95388.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395986974|gb|EJH96137.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395990327|gb|EJH99458.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395994765|gb|EJI03831.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|395997421|gb|EJI06462.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395997834|gb|EJI06874.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396008371|gb|EJI17305.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396010613|gb|EJI19525.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396013883|gb|EJI22770.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396021477|gb|EJI30303.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396022486|gb|EJI31299.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396030018|gb|EJI38753.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396039707|gb|EJI48331.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396040922|gb|EJI49545.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396044789|gb|EJI53384.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396051337|gb|EJI59855.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396052840|gb|EJI61345.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396057688|gb|EJI66158.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396062206|gb|EJI70619.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396065042|gb|EJI73425.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396074028|gb|EJI82319.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402521251|gb|EJW28589.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402524815|gb|EJW32112.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402528635|gb|EJW35886.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402530657|gb|EJW37872.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414018085|gb|EKT01758.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414018901|gb|EKT02532.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414020866|gb|EKT04438.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414032588|gb|EKT15585.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414034157|gb|EKT17093.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414037403|gb|EKT20178.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414047412|gb|EKT29697.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414048659|gb|EKT30898.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414053217|gb|EKT35228.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414059574|gb|EKT41143.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414065095|gb|EKT45896.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434941645|gb|ELL48061.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434957376|gb|ELL51022.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434963499|gb|ELL56593.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434964142|gb|ELL57164.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434973998|gb|ELL66386.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434980337|gb|ELL72258.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434986779|gb|ELL78430.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434990393|gb|ELL81943.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434995002|gb|ELL86319.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|434996450|gb|ELL87766.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435001911|gb|ELL93000.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435009384|gb|ELM00170.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435015092|gb|ELM05649.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435016424|gb|ELM06950.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435025781|gb|ELM15912.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435027133|gb|ELM17262.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435032260|gb|ELM22204.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435038327|gb|ELM28108.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435042877|gb|ELM32594.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435048318|gb|ELM37883.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435052297|gb|ELM41799.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435057851|gb|ELM47220.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062472|gb|ELM51654.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435063705|gb|ELM52853.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435067977|gb|ELM57006.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435079272|gb|ELM67983.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435080644|gb|ELM69312.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435083098|gb|ELM71709.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435089638|gb|ELM78059.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435091137|gb|ELM79538.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435093821|gb|ELM82160.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435102883|gb|ELM90986.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435104997|gb|ELM93034.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435109663|gb|ELM97609.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435117165|gb|ELN04877.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435119900|gb|ELN07502.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435125302|gb|ELN12750.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435131071|gb|ELN18298.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435134825|gb|ELN21951.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435138355|gb|ELN25382.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435146119|gb|ELN32913.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435148279|gb|ELN35007.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435155109|gb|ELN41667.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159391|gb|ELN45731.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435163520|gb|ELN49656.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168510|gb|ELN54342.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435172754|gb|ELN58281.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435177864|gb|ELN63132.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435182268|gb|ELN67296.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191183|gb|ELN75750.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435195891|gb|ELN80248.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197364|gb|ELN81652.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435202783|gb|ELN86597.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435203924|gb|ELN87660.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435208107|gb|ELN91530.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435219855|gb|ELO02173.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435221433|gb|ELO03706.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435225722|gb|ELO07365.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435234630|gb|ELO15484.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435238851|gb|ELO19471.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435245271|gb|ELO25358.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435246641|gb|ELO26639.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435252670|gb|ELO32181.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435253726|gb|ELO33150.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435259351|gb|ELO38577.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435266807|gb|ELO45538.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435271129|gb|ELO49601.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435275299|gb|ELO53383.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435284769|gb|ELO62196.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435293122|gb|ELO69842.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435293255|gb|ELO69960.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435296781|gb|ELO73134.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435303334|gb|ELO79233.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435317459|gb|ELO90507.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435317707|gb|ELO90731.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435324855|gb|ELO96783.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435330622|gb|ELP01888.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435336196|gb|ELP06196.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|444843676|gb|ELX68929.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444843933|gb|ELX69180.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444851580|gb|ELX76668.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444858081|gb|ELX83073.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444861156|gb|ELX86045.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444865038|gb|ELX89818.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444872781|gb|ELX97099.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444875595|gb|ELX99792.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444883049|gb|ELY06963.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889909|gb|ELY13294.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451908815|gb|AGF80621.1| cold shock protein [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 70
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V+ G
Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGP 62
Query: 65 YQALDVTA 72
A++V A
Sbjct: 63 -SAVNVVA 69
>gi|222624666|gb|EEE58798.1| hypothetical protein OsJ_10341 [Oryza sativa Japonica Group]
Length = 233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V FD G+GFI PDD G DLF+HQ S+K D YR+L ++ +E V DG+
Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64
Query: 66 QALDVTAPGG 75
+A+DVTA GG
Sbjct: 65 KAVDVTALGG 74
>gi|116669038|ref|YP_829971.1| cold-shock DNA-binding protein family protein [Arthrobacter sp.
FB24]
gi|444305438|ref|ZP_21141220.1| cold-shock DNA-binding protein family protein [Arthrobacter sp.
SJCon]
gi|116609147|gb|ABK01871.1| cold-shock DNA-binding protein family [Arthrobacter sp. FB24]
gi|443482191|gb|ELT45104.1| cold-shock DNA-binding protein family protein [Arthrobacter sp.
SJCon]
Length = 67
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDG AD+F H +I + GYR+L ENQ VEFDV
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGSADVFAHYSAIATSGYRSLDENQKVEFDV 52
>gi|312795290|ref|YP_004028212.1| Cold shock protein [Burkholderia rhizoxinica HKI 454]
gi|312167065|emb|CBW74068.1| Cold shock protein [Burkholderia rhizoxinica HKI 454]
Length = 98
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKGYGFI PD+GG DLF H +I+ +G++TL E Q V F+V GK Q
Sbjct: 32 ATGTVKWFNDAKGYGFITPDEGGEDLFAHFSAIQMNGFKTLKEGQKVSFEVVQGPKGK-Q 90
Query: 67 ALDVTA 72
A ++ A
Sbjct: 91 ASNIQA 96
>gi|187251844|ref|YP_001876326.1| cold-shock DNA-binding domain-containing protein [Elusimicrobium
minutum Pei191]
gi|186972004|gb|ACC98989.1| Cold-shock DNA-binding domain protein [Elusimicrobium minutum
Pei191]
Length = 67
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ GK+ WF+ KGYGF+ P+DG ADLFVH + I+ +G++TL E Q+VEFDV G
Sbjct: 2 AQGKIKWFNDQKGYGFVTPEDGSADLFVHYQEIQGEGFKTLAEGQAVEFDVAKSEKG 58
>gi|33593717|ref|NP_881361.1| cold-shock protein [Bordetella pertussis Tohama I]
gi|33597156|ref|NP_884799.1| cold-shock protein [Bordetella parapertussis 12822]
gi|33601000|ref|NP_888560.1| cold-shock protein [Bordetella bronchiseptica RB50]
gi|384205006|ref|YP_005590745.1| putative cold-shock protein [Bordetella pertussis CS]
gi|408414683|ref|YP_006625390.1| cold-shock protein [Bordetella pertussis 18323]
gi|410420801|ref|YP_006901250.1| cold-shock protein [Bordetella bronchiseptica MO149]
gi|410472561|ref|YP_006895842.1| cold-shock protein [Bordetella parapertussis Bpp5]
gi|412338815|ref|YP_006967570.1| cold-shock protein [Bordetella bronchiseptica 253]
gi|427815295|ref|ZP_18982359.1| putative cold-shock protein [Bordetella bronchiseptica 1289]
gi|427819567|ref|ZP_18986630.1| putative cold-shock protein [Bordetella bronchiseptica D445]
gi|427824963|ref|ZP_18992025.1| putative cold-shock protein [Bordetella bronchiseptica Bbr77]
gi|33563790|emb|CAE43032.1| putative cold-shock protein [Bordetella pertussis Tohama I]
gi|33566607|emb|CAE37865.1| putative cold-shock protein [Bordetella parapertussis]
gi|33575435|emb|CAE32513.1| putative cold-shock protein [Bordetella bronchiseptica RB50]
gi|332383120|gb|AEE67967.1| putative cold-shock protein [Bordetella pertussis CS]
gi|401776853|emb|CCJ62095.1| putative cold-shock protein [Bordetella pertussis 18323]
gi|408442671|emb|CCJ49229.1| putative cold-shock protein [Bordetella parapertussis Bpp5]
gi|408448096|emb|CCJ59775.1| putative cold-shock protein [Bordetella bronchiseptica MO149]
gi|408768649|emb|CCJ53417.1| putative cold-shock protein [Bordetella bronchiseptica 253]
gi|410566295|emb|CCN23856.1| putative cold-shock protein [Bordetella bronchiseptica 1289]
gi|410570567|emb|CCN18753.1| putative cold-shock protein [Bordetella bronchiseptica D445]
gi|410590228|emb|CCN05310.1| putative cold-shock protein [Bordetella bronchiseptica Bbr77]
Length = 81
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ AKG+GFI PDDGG DLF H SI+ +G++TL E Q V F++ GK
Sbjct: 15 KATGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVSFEIIQGPKGK- 73
Query: 66 QALDVTA 72
QAL++T+
Sbjct: 74 QALNITS 80
>gi|440231264|ref|YP_007345057.1| cold shock protein [Serratia marcescens FGI94]
gi|440052969|gb|AGB82872.1| cold shock protein [Serratia marcescens FGI94]
Length = 69
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ + TG V WF+ +KG+GFI P DG D+FVH +I SDG++TL E Q VEF +Q G
Sbjct: 1 MAKITGHVKWFNESKGFGFITPADGSKDVFVHFSAIVSDGFKTLAEGQQVEFSIQDSQRG 60
Query: 64 KYQALDVTA 72
A DV A
Sbjct: 61 P-AAADVVA 68
>gi|157105290|ref|XP_001648803.1| RNA-binding protein lin-28 [Aedes aegypti]
gi|108880147|gb|EAT44372.1| AAEL004259-PA, partial [Aedes aegypti]
Length = 157
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G WF+ KG+GFI PDDGG D+FVHQ ++ +G+R+L +N+ VEF+ +L D Y+A
Sbjct: 3 GLCKWFNVIKGWGFITPDDGGQDVFVHQSVLQMEGFRSLGQNEPVEFEAKL-TDKGYEAT 61
Query: 69 DVTAPGGA 76
V P +
Sbjct: 62 KVYGPSQS 69
>gi|304413830|ref|ZP_07395247.1| Cold shock protein [Candidatus Regiella insecticola LSR1]
gi|304283550|gb|EFL91945.1| Cold shock protein [Candidatus Regiella insecticola LSR1]
Length = 88
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ ++++ G V WF+ AKG+GFI PDD D+FVH +I+ DG++TL E Q VEFD++
Sbjct: 17 IFKMSKIKGSVKWFNEAKGFGFITPDDKSKDVFVHFSAIQGDGFKTLGEGQQVEFDIE 74
>gi|197632623|gb|ACH71035.1| zinc finger protein 9-2 [Salmo salar]
Length = 162
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH++R+C ++ CY+CG H ARDC + N C
Sbjct: 59 CYNCHRSGHISRDCKEPKKE-----REQCCYSCGKAGHVARDCD---------HANEQKC 104
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
+ CGG+GH+ + C +CY CG+ GH+A C +C+ CG GH A
Sbjct: 105 YSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASEV---NCYKCGNTGHLA 153
Query: 251 RECTKVAN 258
+ECT A
Sbjct: 154 KECTIEAT 161
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---CFKCGGYGHLARDCITRGSGGGG 212
+S C+ CG P H+ ++CP G G C++CG GH+ARDC
Sbjct: 2 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDA--- 58
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C++CGK GH AR+C
Sbjct: 59 ---CYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDC 96
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGR-------CYNCGKSGHLARDCGAGGAGGGG 238
+S CF+CG GH ++C G G G GR CY CG+ GH+ARDC
Sbjct: 2 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDC----EQTED 57
Query: 239 SCFNCGKPGHFARECTK 255
+C+NC + GH +R+C +
Sbjct: 58 ACYNCHRSGHISRDCKE 74
>gi|296127882|ref|YP_003635132.1| cold-shock protein [Cellulomonas flavigena DSM 20109]
gi|296019697|gb|ADG72933.1| cold-shock DNA-binding domain protein [Cellulomonas flavigena DSM
20109]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KG+GFI P DG AD+F H +I S G+RTL ENQ VEF+V G Q
Sbjct: 2 ATGTVKWFNAEKGFGFIAPSDGSADVFAHYSAIASSGFRTLEENQQVEFEVTQGPKG-LQ 60
Query: 67 ALDV 70
A D+
Sbjct: 61 ASDI 64
>gi|395773960|ref|ZP_10454475.1| cold-shock DNA-binding domain-containing protein [Streptomyces
acidiscabies 84-104]
Length = 68
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
G V WF+G KG+GFI PDDGG+D+FVH +I+ G+R L ENQ VEF+V
Sbjct: 5 GTVKWFNGEKGFGFISPDDGGSDVFVHYSAIQGTGFRNLDENQRVEFEV 53
>gi|419966810|ref|ZP_14482727.1| cold shock protein [Rhodococcus opacus M213]
gi|414567799|gb|EKT78575.1| cold shock protein [Rhodococcus opacus M213]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+G KG+GFI PDDGG DLFV I+ GY++L ENQ VEF+V
Sbjct: 2 AQGTVKWFNGEKGFGFISPDDGGTDLFVQFSEIQCSGYKSLQENQRVEFEV 52
>gi|361067839|gb|AEW08231.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139387|gb|AFG50921.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139389|gb|AFG50922.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139391|gb|AFG50923.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139393|gb|AFG50924.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139395|gb|AFG50925.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139397|gb|AFG50926.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139399|gb|AFG50927.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139401|gb|AFG50928.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139403|gb|AFG50929.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139405|gb|AFG50930.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139407|gb|AFG50931.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139409|gb|AFG50932.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139411|gb|AFG50933.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139413|gb|AFG50934.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139415|gb|AFG50935.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139417|gb|AFG50936.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139419|gb|AFG50937.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
Length = 139
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC NC GH+A ECT+ C+NC +P H A C +
Sbjct: 7 PNVAVCNNCGLPGHIAVECTT----------KSLCWNCREPGHVASQC-----------S 45
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N C CG GHL+RDC G C NC K GH+A +C A C NC K
Sbjct: 46 NDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKA-----CNNCRK 100
Query: 246 PGHFARECT 254
GH AR+CT
Sbjct: 101 TGHLARDCT 109
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 45/101 (44%), Gaps = 25/101 (24%)
Query: 168 HFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR------------GSGGGGGGR 215
HFARDCP N C CG GH+A +C T+ S
Sbjct: 1 HFARDCP-----------NVAVCNNCGLPGHIAVECTTKSLCWNCREPGHVASQCSNDPI 49
Query: 216 CYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPGHFARECT 254
C+ CGKSGHL+RDC A G C NC K GH A ECT
Sbjct: 50 CHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECT 90
>gi|330447209|ref|ZP_08310859.1| 'Cold-shock' DNA-binding domain protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491400|dbj|GAA05356.1| 'Cold-shock' DNA-binding domain protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 71
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
L++STG V WF+ KG+GFI D+GGAD+FVH ++I S+G++TL E Q V FDV+ G
Sbjct: 3 LSKSTGSVKWFNEEKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFDVEQGQKG 62
Query: 64 KYQALDVTA 72
QA +V A
Sbjct: 63 -LQAANVVA 70
>gi|396477991|ref|XP_003840426.1| similar to zinc knuckle domain-containing protein [Leptosphaeria
maculans JN3]
gi|312216998|emb|CBX96947.1| similar to zinc knuckle domain-containing protein [Leptosphaeria
maculans JN3]
Length = 196
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG----CYNCGDPEHFARDCPRQQGGSNSYNN 185
CY C G GH++RECT + G CY CG H AR+C + G
Sbjct: 57 TCYRCGGTGHISRECTKDGGAQMGGRGGGSGGQECYKCGQQGHIARNCSQGGGYGGQQQG 116
Query: 186 ------------------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLAR 227
C+ CGG+GH++RDC G +CYNCG+ GHL+R
Sbjct: 117 GYGGRGGYGGGQGGYGGARQTTCYSCGGFGHMSRDCTQ-------GQKCYNCGEVGHLSR 169
Query: 228 DCGAGGAGGGGSCFNCGKPGHFAREC 253
DC C+ C +PGH C
Sbjct: 170 DC-PQETSSERVCYRCKQPGHVQSAC 194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 47/160 (29%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CYNC H A EC + + CYNCG+ H +R+C Q
Sbjct: 11 GGRGCYNCGDNSHRAAECPTK--------GTPTCYNCGEKGHVSRECTSPQAEKT----- 57
Query: 187 SGGCFKCGGYGHLARDCI-------TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG- 238
C++CGG GH++R+C GG GG CY CG+ GH+AR+C GG GG
Sbjct: 58 ---CYRCGGTGHISRECTKDGGAQMGGRGGGSGGQECYKCGQQGHIARNCSQGGGYGGQQ 114
Query: 239 -----------------------SCFNCGKPGHFARECTK 255
+C++CG GH +R+CT+
Sbjct: 115 QGGYGGRGGYGGGQGGYGGARQTTCYSCGGFGHMSRDCTQ 154
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 17/75 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
CY+C G GH++R+CT ++ CYNCG+ H +RDCP++ ++
Sbjct: 137 TTCYSCGGFGHMSRDCTQGQK----------CYNCGEVGHLSRDCPQE-------TSSER 179
Query: 189 GCFKCGGYGHLARDC 203
C++C GH+ C
Sbjct: 180 VCYRCKQPGHVQSAC 194
>gi|294053655|ref|YP_003547313.1| cold-shock DNA-binding domain-containing protein
[Coraliomargarita akajimensis DSM 45221]
gi|293612988|gb|ADE53143.1| cold-shock DNA-binding domain protein [Coraliomargarita
akajimensis DSM 45221]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
STG V WFD KGYGFI+PDDG DLFVH I+SDGY L + Q VEF+V
Sbjct: 2 STGTVKWFDAEKGYGFIQPDDGSKDLFVHHSEIQSDGYAKLEDGQKVEFEV 52
>gi|167586483|ref|ZP_02378871.1| cold-shock DNA-binding domain protein [Burkholderia ubonensis Bu]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H IK DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIKMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|326488841|dbj|BAJ98032.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492013|dbj|BAJ98231.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC+ C GH+A EC+S C+NC +P H A CP
Sbjct: 57 PNVSVCHACGLPGHIAAECSSK----------DLCWNCKEPGHMANACP----------- 95
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH+A+DC G C NC K GH+A +C A C NC K
Sbjct: 96 NEGICRNCGKSGHIAKDCTAPPMLPGEVKLCNNCYKPGHIAVECTNEKA-----CNNCRK 150
Query: 246 PGHFARECT 254
GH AR CT
Sbjct: 151 SGHLARNCT 159
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 52/112 (46%), Gaps = 25/112 (22%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR---------- 206
S C NC P HFARDCP N C CG GH+A +C ++
Sbjct: 40 SDLCNNCKRPGHFARDCP-----------NVSVCHACGLPGHIAAECSSKDLCWNCKEPG 88
Query: 207 --GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPGHFARECT 254
+ G C NCGKSGH+A+DC A G C NC KPGH A ECT
Sbjct: 89 HMANACPNEGICRNCGKSGHIAKDCTAPPMLPGEVKLCNNCYKPGHIAVECT 140
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 206 RGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
RG C NC + GH ARDC C CG PGH A EC+
Sbjct: 33 RGPSRSASDLCNNCKRPGHFARDC-----PNVSVCHACGLPGHIAAECS 76
>gi|422014994|ref|ZP_16361601.1| DNA replication inhibitor, nucleic acid-binding domain
[Providencia burhodogranariea DSM 19968]
gi|414100225|gb|EKT61846.1| DNA replication inhibitor, nucleic acid-binding domain
[Providencia burhodogranariea DSM 19968]
Length = 83
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P++GG D+F H I+ DGYRTL Q V F + + G +
Sbjct: 1 METGTVKWFNNAKGFGFICPENGGEDIFAHYSCIQMDGYRTLKAGQKVNFSINIGPKGNH 60
Query: 66 QALDVTAPGGAPVHSSKNNNTN 87
L V P+ S NNTN
Sbjct: 61 ANLIV------PIEDSTVNNTN 76
>gi|428185247|gb|EKX54100.1| hypothetical protein GUITHDRAFT_91776 [Guillardia theta CCMP2712]
Length = 111
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ TGKV WF+ KGYGFI P +GG D+FVHQ +I ++G+R+L E + VEF++ + G
Sbjct: 1 MSKITGKVKWFNVKKGYGFITPTNGGEDIFVHQTAIHAEGFRSLKEEEEVEFEIS-DNGG 59
Query: 64 KYQALDVTAPGGAPVH 79
K +A++VT P GA V
Sbjct: 60 KSKAINVTGPAGAYVQ 75
>gi|405965019|gb|EKC30448.1| Putative ATP-dependent RNA helicase DDX4 [Crassostrea gigas]
Length = 779
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NC GH AREC R+ GC NCG+ HFAR+CP + G + GC
Sbjct: 178 CRNCGEEGHFARECPEPRKGGG-GGGDKGCRNCGEEGHFARECPEPRKGGGGGGDR--GC 234
Query: 191 FKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARDC 229
CG GH AR+C + GGGGGG+C+ C + GH+ARDC
Sbjct: 235 RNCGEEGHFARECPNPKKEGGGGGGGKCFKCQEEGHMARDC 275
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI-TRGSGGGGGGR-CY 217
C NCG+ HFAR+CP + G GC CG GH AR+C R GGGGG R C
Sbjct: 178 CRNCGEEGHFARECPEPRKGGGG--GGDKGCRNCGEEGHFARECPEPRKGGGGGGDRGCR 235
Query: 218 NCGKSGHLARDCG----AGGAGGGGSCFNCGKPGHFAREC 253
NCG+ GH AR+C GG GGGG CF C + GH AR+C
Sbjct: 236 NCGEEGHFARECPNPKKEGGGGGGGKCFKCQEEGHMARDC 275
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
C NC GH AREC N + G C+ C + H ARDCP
Sbjct: 234 CRNCGEEGHFAREC-PNPKKEGGGGGGGKCFKCQEEGHMARDCP 276
>gi|116786624|gb|ABK24177.1| unknown [Picea sitchensis]
Length = 248
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P VC NC GH+A ECT+ C+NC +P H A C +
Sbjct: 56 PNVSVCNNCGLPGHIAVECTT----------KSLCWNCREPGHVASQC-----------S 94
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N C CG GHL+RDC G C NC K GH+A +C A C NC K
Sbjct: 95 NDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKA-----CNNCRK 149
Query: 246 PGHFARECT 254
GH AR+CT
Sbjct: 150 TGHLARDCT 158
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR------------ 206
C NC P HFARDCP N C CG GH+A +C T+
Sbjct: 41 ACKNCKRPGHFARDCP-----------NVSVCNNCGLPGHIAVECTTKSLCWNCREPGHV 89
Query: 207 GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPGHFARECT 254
S C+ CGKSGHL+RDC A G C NC K GH A ECT
Sbjct: 90 ASQCSNDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECT 139
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 61/158 (38%), Gaps = 48/158 (30%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PR------------ 175
+C+NC GHVA +C+ N C+ CG H +RDC P
Sbjct: 79 LCWNCREPGHVASQCS----------NDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNC 128
Query: 176 -QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG-- 232
+QG + N C C GHLARDC C C SGH+AR+C G
Sbjct: 129 YKQGHIAAECTNEKACNNCRKTGHLARDCT-------NSPVCNLCNISGHVARECPKGRI 181
Query: 233 --------------GAGGGGSCFNCGKPGHFARECTKV 256
G C C +PGH +RECT +
Sbjct: 182 LDDNRGGRFMDERRGRFNDIICRTCNEPGHTSRECTPI 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 58/153 (37%), Gaps = 41/153 (26%)
Query: 116 SRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
SR PG + +C NC GH+A ECT N C NC H ARDC
Sbjct: 109 SRDCTAPELPPGDIRLCNNCYKQGHIAAECT----------NEKACNNCRKTGHLARDC- 157
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGR-------------CYNCG 220
NS C C GH+AR+C R GGR C C
Sbjct: 158 ----------TNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTCN 207
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
+ GH +R+C C NCG GH A EC
Sbjct: 208 EPGHTSRECTPILI-----CHNCGGRGHVAYEC 235
>gi|418396490|ref|ZP_12970315.1| hypothetical protein BP354A_4680 [Burkholderia pseudomallei 354a]
gi|418556164|ref|ZP_13120817.1| hypothetical protein BP354E_3890 [Burkholderia pseudomallei 354e]
gi|385367418|gb|EIF72957.1| hypothetical protein BP354E_3890 [Burkholderia pseudomallei 354e]
gi|385371357|gb|EIF76543.1| hypothetical protein BP354A_4680 [Burkholderia pseudomallei 354a]
Length = 235
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ TG V WF+ KG+GFI PD GG DLF H I+S+GY+TL ENQ V F+ +
Sbjct: 167 ILMDTGTVKWFNETKGFGFITPDSGGDDLFAHFSEIRSEGYKTLAENQKVSFETK 221
>gi|452983542|gb|EME83300.1| hypothetical protein MYCFIDRAFT_136456, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 425
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ------------ 176
+ C C+ GH AR+CT R++ + GC NCG +H ++CP +
Sbjct: 250 ITCAVCNAEGHRARDCTQERKS-----DKRGCKNCGSEDHMVKECPTKAPDVCRNCGEEG 304
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ N C C +GH +RDC +C NC + GH +RDC
Sbjct: 305 HRKTECTNERQMQCRNCDKWGHASRDCPE--PKNMDKVQCRNCDEFGHNSRDCPQPTDWS 362
Query: 237 GGSCFNCGKPGHFARECTKVA 257
C NC + GH + CTK A
Sbjct: 363 RVECSNCHEKGHTYKRCTKPA 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 162 NCGDPEHFARDC--PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
+CGD HFARDC PR+ GG +G CF CG GH DC G C C
Sbjct: 1 SCGDEGHFARDCPEPRKDGGG-----LTGECFNCGEVGHNKADCTNPRVEREFTGTCNGC 55
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
G GH +C C C + GH EC+
Sbjct: 56 GAQGHRKAECPVAPP---RRCKVCHQDGHVTSECS 87
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGG--RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPG 247
C C GH+A++C G C C GH ARDC C NCG
Sbjct: 224 CSNCQQLGHIAKNCEQEKQEPAGKVVITCAVCNAEGHRARDCTQERKSDKRGCKNCGSED 283
Query: 248 HFARECTKVA 257
H +EC A
Sbjct: 284 HMVKECPTKA 293
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 133 NCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSGGC 190
+C GH AR+C R++ +G C+NCG+ H DC PR + +G C
Sbjct: 1 SCGDEGHFARDCPEPRKDG--GGLTGECFNCGEVGHNKADCTNPRVE------REFTGTC 52
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
CG GH +C RC C + GH+ +C A
Sbjct: 53 NGCGAQGHRKAECPV-----APPRRCKVCHQDGHVTSECSA 88
>gi|401420040|ref|XP_003874509.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490745|emb|CBZ26009.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 135
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 35/148 (23%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +RECTS +S C+ CG P H A++C ++
Sbjct: 1 MVCYRCGGVGHQSRECTSA-------ADSAPCFRCGKPGHVAKEC------VSTITAEEA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC------------------- 229
CF C GH ARDC CYNC + GH+A +C
Sbjct: 48 PCFYCQKPGHRARDC-PDAPPKSETVMCYNCSQKGHIASECPNPAHCYLCNEDGHIGRSC 106
Query: 230 --GAGGAGGGGSCFNCGKPGHFARECTK 255
+ SC CGK GH ++C +
Sbjct: 107 PTAPKRSVAEKSCRKCGKKGHLRKDCPE 134
>gi|442762043|gb|JAA73180.1| Putative e3 ubiquitin ligase, partial [Ixodes ricinus]
Length = 179
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 72/200 (36%), Gaps = 50/200 (25%)
Query: 77 PVHSSKNNNTNNNSGYNN-NRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCD 135
P H N+TN G + R GR G GG CY C
Sbjct: 2 PAHLITPNSTNEAGGSQSVEREGRESTAGAEGA-----------RGGRRSMSATECYKCH 50
Query: 136 GVGHVARECTSNRRNSNYNNNSGG--------------------CYNCGDPEHFARDCPR 175
GH AREC + G CY C HFARDC
Sbjct: 51 KPGHFARECFQDGGGVGRGGGLGPRGGRGGPRGRMDYKPPIREKCYKCNRIGHFARDC-- 108
Query: 176 QQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAG 235
C++C G GH+++DC G CYNCGK GH+AR+C
Sbjct: 109 --------KEAEDRCYRCNGTGHISKDC----QHGPDEMSCYNCGKMGHIARECKEQEK- 155
Query: 236 GGGSCFNCGKPGHFARECTK 255
+C+ C K GH +R+C +
Sbjct: 156 ---TCYICHKQGHISRDCEQ 172
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
+GP + CYNC +GH+AREC + CY C H +RDC + +
Sbjct: 130 HGPDEMSCYNCGKMGHIARECKEQEKT---------CYICHKQGHISRDCEQDE 174
>gi|260905033|ref|ZP_05913355.1| cold-shock DNA-binding domain protein [Brevibacterium linens BL2]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ KG+GFI+PDDG AD+F H +I+S GYR L E Q+VEFD ++ + G
Sbjct: 2 ATGTVKWFNSEKGFGFIQPDDGSADVFTHFSAIESTGYRELAEGQNVEFDSEMGSKG 58
>gi|73539162|ref|YP_299529.1| cold-shock DNA-binding protein family protein [Ralstonia eutropha
JMP134]
gi|72122499|gb|AAZ64685.1| cold-shock DNA-binding protein family [Ralstonia eutropha JMP134]
Length = 83
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI+PD GG DLF H I+S+G+++L ENQ V F+V+ G QA
Sbjct: 19 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRSEGFKSLQENQRVSFEVKNGPKG-LQA 77
Query: 68 LDVT 71
++T
Sbjct: 78 ANIT 81
>gi|377819980|ref|YP_004976351.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. YI23]
gi|357934815|gb|AET88374.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. YI23]
Length = 90
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
++ STG V WF+ AKGYGFI PD+GG DLF H +I+ +G++TL E Q V F++
Sbjct: 20 EVRMSTGTVKWFNDAKGYGFITPDEGGEDLFAHFSAIQMNGFKTLKEGQKVSFEI 74
>gi|238919761|ref|YP_002933276.1| cold-shock DNA-binding domain protein [Edwardsiella ictaluri
93-146]
gi|238869330|gb|ACR69041.1| cold-shock DNA-binding domain protein [Edwardsiella ictaluri
93-146]
Length = 69
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G+V WF+ +KG+GFI P DG D+FVH +I+SDG++TL E Q VEF +Q G
Sbjct: 1 MSKKNGQVKWFNESKGFGFITPADGSKDVFVHFSAIQSDGFKTLAEGQQVEFSIQDSPRG 60
Query: 64 KYQALDVTA 72
A DV A
Sbjct: 61 P-AAADVIA 68
>gi|407711140|ref|YP_006835913.1| Cold shock-like protein CspA [Burkholderia phenoliruptrix
BR3459a]
gi|407239823|gb|AFT90020.1| Cold shock-like protein CspA [Burkholderia phenoliruptrix
BR3459a]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDGG DLF H I++ G+R+L ENQ V F+V+ G+
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIQAKGFRSLQENQKVSFEVKQGPKGRQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|452124507|ref|ZP_21937091.1| cold-shock protein [Bordetella holmesii F627]
gi|452127899|ref|ZP_21940478.1| cold-shock protein [Bordetella holmesii H558]
gi|451923737|gb|EMD73878.1| cold-shock protein [Bordetella holmesii F627]
gi|451926114|gb|EMD76250.1| cold-shock protein [Bordetella holmesii H558]
Length = 81
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ AKG+GFI PDDGG DLF H SI+ +G++TL E Q V F+ GK
Sbjct: 15 KSTGTVKWFNDAKGFGFITPDDGGEDLFAHFSSIQMNGFKTLKEGQKVAFETIQGPKGK- 73
Query: 66 QALDVTA 72
QAL++T+
Sbjct: 74 QALNITS 80
>gi|78065585|ref|YP_368354.1| cold-shock DNA-binding protein family protein [Burkholderia sp.
383]
gi|77966330|gb|ABB07710.1| cold-shock DNA-binding protein family [Burkholderia sp. 383]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H IK DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIKMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|418536328|ref|ZP_13102024.1| hypothetical protein BP1026A_3134 [Burkholderia pseudomallei 1026a]
gi|385352814|gb|EIF59203.1| hypothetical protein BP1026A_3134 [Burkholderia pseudomallei 1026a]
Length = 235
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ TG V WF+ KG+GFI PD GG DLF H I+S+GY+TL ENQ V F+ +
Sbjct: 167 ILMDTGTVKWFNETKGFGFITPDSGGDDLFAHFSEIRSEGYKTLAENQKVSFETK 221
>gi|375000868|ref|ZP_09725208.1| transcriptional repressor activity CueR [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353075556|gb|EHB41316.1| transcriptional repressor activity CueR [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 70
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+ TG V WF+ KG+GFI P DG D+FVH +I+S+ +RTL ENQ VEF V+ G
Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGP 62
Query: 65 YQALDVTA 72
A++V A
Sbjct: 63 -SAVNVVA 69
>gi|336319206|ref|YP_004599174.1| cold-shock DNA-binding domain protein [[Cellvibrio] gilvus ATCC
13127]
gi|336102787|gb|AEI10606.1| cold-shock DNA-binding domain protein [[Cellvibrio] gilvus ATCC
13127]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI P DG AD+F H +I + G+RTL ENQ VEFDV
Sbjct: 2 ATGTVKWFNAEKGYGFIAPSDGSADVFAHYSAIATSGFRTLEENQQVEFDV 52
>gi|311742699|ref|ZP_07716508.1| CspA family cold shock transcriptional regulator [Aeromicrobium
marinum DSM 15272]
gi|311314327|gb|EFQ84235.1| CspA family cold shock transcriptional regulator [Aeromicrobium
marinum DSM 15272]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG V WF+ KG+GFI PDDG D+F H +I+S GYR+L ENQ VEFDV+
Sbjct: 2 ATGTVKWFNADKGFGFIAPDDGSEDVFAHFTAIQSSGYRSLNENQKVEFDVE 53
>gi|377565966|ref|ZP_09795242.1| putative cold shock protein [Gordonia sputi NBRC 100414]
gi|377526880|dbj|GAB40407.1| putative cold shock protein [Gordonia sputi NBRC 100414]
Length = 67
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDD D+FVH +I G+R+L E Q VEFDV+ A G Q
Sbjct: 2 TQGTVKWFNGEKGFGFIAPDDQSQDVFVHYSAITGSGFRSLEEQQRVEFDVEQGAKG-LQ 60
Query: 67 ALDVTA 72
A +VTA
Sbjct: 61 ATNVTA 66
>gi|242239550|ref|YP_002987731.1| cold-shock DNA-binding domain-containing protein [Dickeya
dadantii Ech703]
gi|242131607|gb|ACS85909.1| cold-shock DNA-binding domain protein [Dickeya dadantii Ech703]
Length = 70
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ TG V WFD KG+GFI PD+G D+FVH +I+SD Y+TLYE Q VEF +Q
Sbjct: 4 KMTGLVKWFDAGKGFGFITPDNGSKDVFVHFSAIQSDDYKTLYEGQKVEFVIQ 56
>gi|187477996|ref|YP_786020.1| cold shock-like protein [Bordetella avium 197N]
gi|115422582|emb|CAJ49107.1| cold shock-like protein [Bordetella avium 197N]
Length = 68
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI PDDGG DLF H I+S+GY++L ENQ V F++
Sbjct: 2 ATGIVKWFNAEKGYGFILPDDGGKDLFAHYSEIRSEGYKSLQENQRVSFEI 52
>gi|433645591|ref|YP_007290593.1| cold shock protein [Mycobacterium smegmatis JS623]
gi|433295368|gb|AGB21188.1| cold shock protein [Mycobacterium smegmatis JS623]
Length = 67
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDDG D+FVH I+ G+RTL ENQ V+F+V+ A G Q
Sbjct: 2 AQGTVKWFNGDKGFGFITPDDGAKDVFVHFSEIQGSGFRTLEENQRVQFEVEQGAKGP-Q 60
Query: 67 ALDVTA 72
A+ V+A
Sbjct: 61 AVRVSA 66
>gi|225022302|ref|ZP_03711494.1| hypothetical protein CORMATOL_02341 [Corynebacterium matruchotii
ATCC 33806]
gi|224944899|gb|EEG26108.1| hypothetical protein CORMATOL_02341 [Corynebacterium matruchotii
ATCC 33806]
Length = 73
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
M + T + G V WF+ KG+GFI P+DG AD+FVH I DG+R L ENQ VEF+V
Sbjct: 1 MKENTMAKGAVKWFNAEKGFGFIEPEDGSADVFVHYSEINGDGFRYLEENQVVEFEVGDG 60
Query: 61 ADGKYQALDV 70
A G QAL+V
Sbjct: 61 AKGT-QALNV 69
>gi|388515269|gb|AFK45696.1| unknown [Medicago truncatula]
Length = 269
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 99 RGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSG 158
R GF N R + G P VC+NC GH+A EC++
Sbjct: 40 RRDSSRGFSRDNLCKNCKRPGHYAGECPNVAVCHNCGLPGHIASECSTK----------S 89
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C+NC + H A +CP N G C CG GH AR+C G C+N
Sbjct: 90 VCWNCKESGHMASNCP-----------NEGICHTCGKTGHRARECSAPSLPPGDLRLCHN 138
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C K GH+A +C A C NC K GH AR+C
Sbjct: 139 CYKQGHIAAECTNEKA-----CNNCRKTGHLARDC 168
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
RR++ G+ + C NC GH A EC N C+NCG P H A +C
Sbjct: 40 RRDSSRGFSRDNL-CKNCKRPGHYAGECP----------NVAVCHNCGLPGHIASEC--- 85
Query: 177 QGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
+ C+ C GH+A +C G C+ CGK+GH AR+C A
Sbjct: 86 --------STKSVCWNCKESGHMASNCPNEGI-------CHTCGKTGHRARECSAPSLPP 130
Query: 237 GGS--CFNCGKPGHFARECT 254
G C NC K GH A ECT
Sbjct: 131 GDLRLCHNCYKQGHIAAECT 150
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 63/166 (37%), Gaps = 48/166 (28%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C+NC GH+A ECT N C NC H
Sbjct: 115 KTGHRARECSAPSLPPGDLRLCHNCYKQGHIAAECT----------NEKACNNCRKTGHL 164
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GHLAR C G GR
Sbjct: 165 ARDCP-----------NDPICNVCNVSGHLARQCPKSDVIGDHRGRGSFRGAGGGVAAGG 213
Query: 216 --------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C NC + GH++RDC G C NCG GH A EC
Sbjct: 214 GGGYRDVVCRNCQQFGHMSRDC----MGPLMICHNCGGCGHLAYEC 255
>gi|169617029|ref|XP_001801929.1| hypothetical protein SNOG_11691 [Phaeosphaeria nodorum SN15]
gi|111059615|gb|EAT80735.1| hypothetical protein SNOG_11691 [Phaeosphaeria nodorum SN15]
Length = 489
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 112 GNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
G D + + ++C+NC H+AR+C + C+NC H +R
Sbjct: 280 GTQDETSSEQSQHLERVIICFNCREAHHIARDCLAK----------PVCFNCSVAGHASR 329
Query: 172 DC---PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC------GKS 222
DC P + S + C+ C GH+A+DC G G + K
Sbjct: 330 DCTEGPDELCVSKKQAQAARVCYNCNEKGHIAKDCTAHHKGDGPEDQASAVHSLQLPWKG 389
Query: 223 GHLARDCGAGGAG-------GGGSCFNCGKPGHFARECTKVA 257
GH+AR+C A C+NC + GH AR+C+ A
Sbjct: 390 GHIARNCKAETKTPSTNNERAPPVCYNCTEEGHLARDCSAPA 431
>gi|219882627|ref|YP_002477791.1| cold-shock protein [Arthrobacter chlorophenolicus A6]
gi|219861633|gb|ACL41974.1| cold-shock DNA-binding domain protein [Arthrobacter
chlorophenolicus A6]
Length = 67
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDG AD+F H +I S GYR+L ENQ V+FDV
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGSADVFAHYSAIASSGYRSLDENQKVQFDV 52
>gi|296412703|ref|XP_002836061.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629863|emb|CAZ80218.1| unnamed protein product [Tuber melanosporum]
Length = 183
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 131 CYNCDGVGHVARECTSNRRN-------SNYNNNSGGCYNCGDPEHFARDCP---RQQGGS 180
CY C GH++R+C + S + CY CG H AR C GG
Sbjct: 55 CYRCGQTGHLSRDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTASGAGYGGP 114
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
C+ CGGYGHL+RDC G +CYNCG+ GHL+RDC + C
Sbjct: 115 PGGGARQQTCYSCGGYGHLSRDCTQ-------GQKCYNCGQIGHLSRDC---PSEQDRVC 164
Query: 241 FNCGKPGHFARECTKV 256
+ C +PGH C +
Sbjct: 165 YKCKQPGHVMASCPEA 180
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 34/134 (25%)
Query: 155 NNSGGCYNCGDPEHFARDCPRQQGGSNSYN--------------NNSGGCFKCGGYGHLA 200
NN+ CYNCG+ H AR+CP++ G YN C++CG GHL+
Sbjct: 7 NNARACYNCGEGGHQARECPKR-GTPVCYNCGRMFFPRRDCTGPAKEKSCYRCGQTGHLS 65
Query: 201 RDC----------ITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG---------SCF 241
RDC G GGG CY CGK GH+AR C A GAG GG +C+
Sbjct: 66 RDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTASGAGYGGPPGGGARQQTCY 125
Query: 242 NCGKPGHFARECTK 255
+CG GH +R+CT+
Sbjct: 126 SCGGYGHLSRDCTQ 139
>gi|295698317|ref|YP_003602972.1| hypothetical protein RIEPE_0091 [Candidatus Riesia pediculicola
USDA]
gi|291157076|gb|ADD79521.1| conserved domain protein [Candidatus Riesia pediculicola USDA]
Length = 69
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+++ G V WF+ AKG+GFI P+DG D+FVH SI+S+G++TL E Q VEFDV
Sbjct: 1 MSKIKGSVKWFNEAKGFGFISPEDGSKDVFVHFTSIQSEGFKTLTEGQKVEFDV 54
>gi|237748947|ref|ZP_04579427.1| cold shock transcription regulator [Oxalobacter formigenes
OXCC13]
gi|229380309|gb|EEO30400.1| cold shock transcription regulator [Oxalobacter formigenes
OXCC13]
Length = 67
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ +KG+GFI PD+GG D+F H +IKSDG+++L ENQ V F+V GK
Sbjct: 2 ATGTVKWFNDSKGFGFITPDEGGEDVFAHFSAIKSDGFKSLKENQRVSFEVTTGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|357467429|ref|XP_003603999.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355493047|gb|AES74250.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|388502654|gb|AFK39393.1| unknown [Medicago truncatula]
Length = 269
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 117 RRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP-- 174
RR++ G+ + C NC GH AREC N C+NCG P H A +C
Sbjct: 40 RRDSSRGFSRDNL-CKNCKRPGHYARECP----------NVAVCHNCGLPGHIASECSTK 88
Query: 175 ------RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARD 228
++ G S N G C CG GH AR+C G C+NC K GH+A +
Sbjct: 89 SVCWNCKESGHMASNCPNEGICHTCGKTGHRARECSAPSLPPGDLRLCHNCYKQGHIAAE 148
Query: 229 CGAGGAGGGGSCFNCGKPGHFAREC 253
C A C NC K GH AR+C
Sbjct: 149 CTNEKA-----CNNCRKTGHLARDC 168
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITR------------G 207
C NC P H+AR+CP N C CG GH+A +C T+
Sbjct: 53 CKNCKRPGHYARECP-----------NVAVCHNCGLPGHIASECSTKSVCWNCKESGHMA 101
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGG--SCFNCGKPGHFARECT 254
S G C+ CGK+GH AR+C A G C NC K GH A ECT
Sbjct: 102 SNCPNEGICHTCGKTGHRARECSAPSLPPGDLRLCHNCYKQGHIAAECT 150
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 63/166 (37%), Gaps = 48/166 (28%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C+NC GH+A ECT N C NC H
Sbjct: 115 KTGHRARECSAPSLPPGDLRLCHNCYKQGHIAAECT----------NEKACNNCRKTGHL 164
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GHLAR C G GR
Sbjct: 165 ARDCP-----------NDPICNVCNVSGHLARQCPKSDVIGDHRGRGSFRGAGGGVAAGG 213
Query: 216 --------CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
C NC + GH++RDC G C NCG GH A EC
Sbjct: 214 GGGYRDVVCRNCQQFGHMSRDC----MGPLMICHNCGGRGHLAYEC 255
>gi|154304431|ref|XP_001552620.1| hypothetical protein BC1G_09091 [Botryotinia fuckeliana B05.10]
Length = 206
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCPRQQG 178
GP VCY C GH++ +C++ G CY C H AR+CP G
Sbjct: 53 GPKEKVCYRCGTSGHISNDCSNPPTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAGG 112
Query: 179 GSNSYNNN-----------------SGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGK 221
+ S CF CGGYGHL+RDC G +CYNCG+
Sbjct: 113 YGGNQGYGGNQGGYGGGFGGGARQGSQTCFSCGGYGHLSRDCTQ-------GQKCYNCGE 165
Query: 222 SGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHL+RDC + C+ C + GH +C
Sbjct: 166 VGHLSRDC-SQETSEARRCYECKQEGHEKLDC 196
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 67/157 (42%), Gaps = 48/157 (30%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH AREC S CYNC +P H +RDCP C
Sbjct: 16 CFTCGTEGHQARECPSR--------GPPKCYNCDNPGHLSRDCPE--------GPKEKVC 59
Query: 191 FKCGGYGHLARDCITRGS---------GGGGGGRCYNCGKSGHLARDCGAGGAG------ 235
++CG GH++ DC + GGGGG +CY C K GH+AR+C G
Sbjct: 60 YRCGTSGHISNDCSNPPTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGY 119
Query: 236 -----------------GGGSCFNCGKPGHFARECTK 255
G +CF+CG GH +R+CT+
Sbjct: 120 GGNQGGYGGGFGGGARQGSQTCFSCGGYGHLSRDCTQ 156
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 38/155 (24%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC---PRQQGGSNSY 183
G CYNCD GH++R+C + CY CG H + DC P + G
Sbjct: 33 GPPKCYNCDNPGHLSRDCPEGPKEKV-------CYRCGTSGHISNDCSNPPTEGAGRGGG 85
Query: 184 NNNSGG--CFKCGGYGHLARDCIT---------------------RGSGGGGGGRCYNCG 220
GG C+KC GH+AR+C G G C++CG
Sbjct: 86 YGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGARQGSQTCFSCG 145
Query: 221 KSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GHL+RDC G C+NCG+ GH +R+C++
Sbjct: 146 GYGHLSRDCTQGQ-----KCYNCGEVGHLSRDCSQ 175
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
GCF CG GH AR+C +RG +CYNC GHL+RDC G C+ CG GH
Sbjct: 15 GCFTCGTEGHQARECPSRGP-----PKCYNCDNPGHLSRDCPEGPK--EKVCYRCGTSGH 67
Query: 249 FARECT 254
+ +C+
Sbjct: 68 ISNDCS 73
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 202 DCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
D T GG C+ CG GH AR+C + G C+NC PGH +R+C +
Sbjct: 2 DSFTSLQGGAPNRGCFTCGTEGHQARECPSRGP---PKCYNCDNPGHLSRDCPE 52
>gi|359775528|ref|ZP_09278855.1| putative cold shock protein [Arthrobacter globiformis NBRC 12137]
gi|359306987|dbj|GAB12684.1| putative cold shock protein [Arthrobacter globiformis NBRC 12137]
Length = 67
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDG AD+F H +I S GYR+L ENQ VEF+V
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGSADVFAHYSAIASSGYRSLDENQKVEFEV 52
>gi|333920303|ref|YP_004493884.1| putative cold shock protein A [Amycolicicoccus subflavus
DQS3-9A1]
gi|333482524|gb|AEF41084.1| putative cold shock protein A [Amycolicicoccus subflavus
DQS3-9A1]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI P+DG AD+FVH I+S G+R+L ENQ VEF++ G+ Q
Sbjct: 2 AQGTVKWFNSEKGFGFIAPEDGSADVFVHYSEIQSSGFRSLEENQRVEFEIGQSPKGQ-Q 60
Query: 67 ALDV 70
A+ V
Sbjct: 61 AIAV 64
>gi|289743447|gb|ADD20471.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Glossina morsitans morsitans]
Length = 150
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 24/137 (17%)
Query: 130 VCYNCDGVGHVAREC------TSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSY 183
CY C+ GH AR+C R+ NN C+ C HFAR CP +
Sbjct: 6 TCYKCNRTGHFARDCNFGGGGGGGGRDMRRGNNREKCFKCNQYGHFARACPEE------- 58
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG---AGGGGSC 240
S C++C G GH+++DC CY C K GH AR+C + SC
Sbjct: 59 ---SERCYRCNGVGHISKDCTQ-----PDNPTCYKCHKVGHWARNCPEASNDRSSSNISC 110
Query: 241 FNCGKPGHFARECTKVA 257
+ C + GH ++ C A
Sbjct: 111 YKCNRTGHISKNCPDTA 127
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 17/104 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CY C+GVGH++++CT ++ CY C H+AR+CP SN ++++ C
Sbjct: 62 CYRCNGVGHISKDCTQ--------PDNPTCYKCHKVGHWARNCPE---ASNDRSSSNISC 110
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
+KC GH++++C CY CGKSGHL R+C G+
Sbjct: 111 YKCNRTGHISKNC------PDTAKTCYGCGKSGHLRRECEEKGS 148
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 157 SGGCYNCGDPEHFARDCPRQQGGSNSYN-----NNSGGCFKCGGYGHLARDCITRGSGGG 211
+ CY C HFARDC GG NN CFKC YGH AR C
Sbjct: 4 ASTCYKCNRTGHFARDCNFGGGGGGGGRDMRRGNNREKCFKCNQYGHFARACPEESE--- 60
Query: 212 GGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
RCY C GH+++DC +C+ C K GH+AR C + +N
Sbjct: 61 ---RCYRCNGVGHISKDCTQPD---NPTCYKCHKVGHWARNCPEASN 101
>gi|209521754|ref|ZP_03270439.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|209497821|gb|EDZ97991.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDGG DLF H I++ G+++L ENQ V F+V+ GK Q
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIQASGFKSLQENQKVSFEVKQGPKGK-Q 60
Query: 67 ALDVTA 72
A ++ A
Sbjct: 61 AANIQA 66
>gi|58267432|ref|XP_570872.1| DNA-binding protein hexbp [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111917|ref|XP_775494.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258153|gb|EAL20847.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227106|gb|AAW43565.1| DNA-binding protein hexbp, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 48/169 (28%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG-----------------------CYNCGDP 166
CYNC GH++REC + + Y G CY CG P
Sbjct: 29 TCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQGSGAGGFGGASGGGECYRCGKP 88
Query: 167 EHFARDCPRQQGGSNSYNNNSG--------------GCFKCGGYGHLARDCITRGSGGGG 212
H AR CP + +G C+ CGG GH++R+C + S G G
Sbjct: 89 GHIARMCPESGDAAAGGFGGAGGYGGFGGGAGFGNKSCYTCGGVGHISRECPSGASRGFG 148
Query: 213 GG--------RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GG +CYNCG+ GH++R+C G +C++CG+PGH A C
Sbjct: 149 GGGGGFGGPRKCYNCGQDGHISRECPQEQ---GKTCYSCGQPGHIASAC 194
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 63/154 (40%), Gaps = 43/154 (27%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
P G C+ C GHVA C + + CYNCG H +R+CP+ +
Sbjct: 4 APRGSSCFKCGQQGHVAAACPAE---------APTCYNCGLSGHLSRECPQPK------- 47
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGGG-----RCYNCGKSGHLARDCGAGGAGGGG- 238
+ C+ CG GHL+ C GG GG CY CGK GH+AR C G G
Sbjct: 48 --NKACYTCGQEGHLSSACPQGSGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGG 105
Query: 239 -------------------SCFNCGKPGHFAREC 253
SC+ CG GH +REC
Sbjct: 106 FGGAGGYGGFGGGAGFGNKSCYTCGGVGHISREC 139
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C+ CG H A CP + + C+ CG GHL+R+C + CY C
Sbjct: 10 CFKCGQQGHVAAACPAE----------APTCYNCGLSGHLSRECPQPKNKA-----CYTC 54
Query: 220 GKSGHLARDC-------GAGGAGGGGSCFNCGKPGHFARECTK 255
G+ GHL+ C G GGA GGG C+ CGKPGH AR C +
Sbjct: 55 GQEGHLSSACPQGSGAGGFGGASGGGECYRCGKPGHIARMCPE 97
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G G C+ CG+ GH+A C A +C+NCG GH +REC + N
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAP----TCYNCGLSGHLSRECPQPKN 48
>gi|373251587|ref|ZP_09539705.1| cold-shock protein [Nesterenkonia sp. F]
Length = 84
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KGYGFI PDD D+FVH +I+S G+RTL ENQ VEF+ G Q
Sbjct: 2 ATGTVKWFNAEKGYGFIAPDDSSDDVFVHFSAIQSSGFRTLEENQKVEFETARGPKG-LQ 60
Query: 67 ALDV 70
A DV
Sbjct: 61 AEDV 64
>gi|332671934|ref|YP_004454942.1| cold-shock DNA-binding domain-containing protein [Cellulomonas
fimi ATCC 484]
gi|332340972|gb|AEE47555.1| cold-shock DNA-binding domain protein [Cellulomonas fimi ATCC
484]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WF+ KG+GFI PDDGG D+F H +I+S GYR+L ENQ V+FDV G QA
Sbjct: 4 GTVKWFNAEKGFGFIAPDDGGPDVFAHYSAIQSSGYRSLEENQKVQFDVTQGPKGP-QAS 62
Query: 69 DVT 71
++T
Sbjct: 63 NIT 65
>gi|302808614|ref|XP_002986001.1| hypothetical protein SELMODRAFT_123455 [Selaginella
moellendorffii]
gi|300146149|gb|EFJ12820.1| hypothetical protein SELMODRAFT_123455 [Selaginella
moellendorffii]
Length = 63
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ TGKV WF+ KG+GFI PDDG +LFVHQ +I ++G+R+L E + VEF V+
Sbjct: 8 KRTGKVKWFNVTKGFGFITPDDGSEELFVHQSAIFAEGFRSLREGEIVEFSVE 60
>gi|33592839|ref|NP_880483.1| cold shock-like protein [Bordetella pertussis Tohama I]
gi|384204138|ref|YP_005589877.1| cold shock-like protein [Bordetella pertussis CS]
gi|408415559|ref|YP_006626266.1| cold shock-like protein [Bordetella pertussis 18323]
gi|33572487|emb|CAE42059.1| cold shock-like protein [Bordetella pertussis Tohama I]
gi|332382252|gb|AEE67099.1| cold shock-like protein [Bordetella pertussis CS]
gi|401777729|emb|CCJ63060.1| cold shock-like protein [Bordetella pertussis 18323]
Length = 66
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI PDDG DLF H I S+GY++L ENQ V F+V
Sbjct: 2 ATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEICSEGYKSLQENQRVSFEV 52
>gi|220933692|ref|YP_002512591.1| cold-shock DNA-binding domain-containing protein
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995002|gb|ACL71604.1| cold-shock DNA-binding domain protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STG V WF+ +KG+GFI P++GGAD+FVH +I+++G++TL E Q V F VQ G Q
Sbjct: 2 STGIVKWFNESKGFGFIAPEEGGADVFVHYSAIQAEGFKTLAEGQRVSFQVQQGPKG-LQ 60
Query: 67 ALDVT 71
A++VT
Sbjct: 61 AVNVT 65
>gi|359427115|ref|ZP_09218189.1| putative cold shock protein [Gordonia amarae NBRC 15530]
gi|358237535|dbj|GAB07771.1| putative cold shock protein [Gordonia amarae NBRC 15530]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDD G D+FVH +I+ G+R+L E Q VEFDV+ A G Q
Sbjct: 2 AQGTVKWFNGDKGFGFIAPDDKGDDVFVHFSAIQGSGFRSLEEQQRVEFDVEQGAKG-LQ 60
Query: 67 ALDVTA 72
A +VTA
Sbjct: 61 ATNVTA 66
>gi|373486536|ref|ZP_09577209.1| cold-shock DNA-binding protein family [Holophaga foetida DSM
6591]
gi|372011397|gb|EHP11992.1| cold-shock DNA-binding protein family [Holophaga foetida DSM
6591]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI PD+GG DLFVH +I+ G+RTL ENQ V FDV
Sbjct: 2 AQGIVKWFNAEKGFGFITPDEGGTDLFVHHTAIQERGFRTLQENQRVAFDV 52
>gi|296115123|ref|ZP_06833764.1| cold shock protein [Gluconacetobacter hansenii ATCC 23769]
gi|295978224|gb|EFG84961.1| cold shock protein [Gluconacetobacter hansenii ATCC 23769]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
+TGKV WF+ KG+GFI PDDGG D+FVH ++++ G R L ENQ+V +D+ +E
Sbjct: 2 ATGKVKWFNATKGFGFIMPDDGGKDVFVHITAVQAAGLRGLDENQAVSYDITME 55
>gi|242018245|ref|XP_002429589.1| zinc finger protein cchc domain containing protein, putative
[Pediculus humanus corporis]
gi|212514556|gb|EEB16851.1| zinc finger protein cchc domain containing protein, putative
[Pediculus humanus corporis]
Length = 380
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 115 DSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP 174
+ RR VC++C G GHV +C S N +G CY CG EH A +C
Sbjct: 212 ERRRAEKSLSRLKKSVCFHCRGSGHVLSQCPS--LTETENTGTGICYKCGSTEHSAIECK 269
Query: 175 RQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARDCGAGG 233
+G S + CF C GH+AR C G GG C CG HL +DC
Sbjct: 270 VVKGSSFQF----AECFICKEQGHIARQCPDNPRGLYPHGGACRECGDVTHLRKDCPKTV 325
Query: 234 AGGGGSCFNCG 244
G
Sbjct: 326 VKKEKETMTLG 336
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C++C H CP + + N +G C+KCG H A +C C+ C
Sbjct: 228 CFHCRGSGHVLSQCP---SLTETENTGTGICYKCGSTEHSAIECKVVKGSSFQFAECFIC 284
Query: 220 GKSGHLARDCGAGGAGG---GGSCFNCGKPGHFARECTKVA 257
+ GH+AR C G GG+C CG H ++C K
Sbjct: 285 KEQGHIARQCPDNPRGLYPHGGACRECGDVTHLRKDCPKTV 325
>gi|256831549|ref|YP_003160276.1| cold-shock DNA-binding domain-containing protein [Jonesia
denitrificans DSM 20603]
gi|256685080|gb|ACV07973.1| cold-shock DNA-binding domain protein [Jonesia denitrificans DSM
20603]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
G V WF+ KG+GFI P+DG AD+F H +I+++GYRTL ENQ VEFDV
Sbjct: 4 GTVKWFNAEKGFGFIAPEDGSADVFAHYSAIQTNGYRTLEENQRVEFDV 52
>gi|114561918|ref|YP_749431.1| cold-shock DNA-binding domain-containing protein [Shewanella
frigidimarina NCIMB 400]
gi|114333211|gb|ABI70593.1| cold-shock DNA-binding protein family [Shewanella frigidimarina
NCIMB 400]
gi|149675718|dbj|BAF64739.1| cold shock protein [Shewanella livingstonensis]
Length = 70
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+GGAD+FVH +SI S+G++TL E Q V FDV+ G
Sbjct: 4 KTTGLVKWFNEDKGFGFITPDNGGADVFVHFRSITSEGFKTLAEGQKVSFDVEQGQKGP- 62
Query: 66 QALDVTA 72
QA +V A
Sbjct: 63 QAANVVA 69
>gi|433603046|ref|YP_007035415.1| hypothetical protein BN6_12160 [Saccharothrix espanaensis DSM
44229]
gi|407880899|emb|CCH28542.1| hypothetical protein BN6_12160 [Saccharothrix espanaensis DSM
44229]
Length = 68
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
G V WF+ KG+GFI PD+GGAD+FVH I+S+GYRTL ENQ VEF++
Sbjct: 5 GTVKWFNAEKGFGFISPDNGGADVFVHYSEIQSNGYRTLEENQRVEFEI 53
>gi|340507460|gb|EGR33421.1| universal minicircle sequence binding protein, putative
[Ichthyophthirius multifiliis]
Length = 724
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+NC + H+++EC + ++ S CY C H A+DCP Q Y C
Sbjct: 331 CFNCGEITHMSKECPNPKKPR-----SIQCYKCQQEGHMAKDCPNAQ----QYQARVMKC 381
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
F C GH + DC C C + GH ++DC CFNCG GH
Sbjct: 382 FLCKKEGHKSNDCTE-------PPLCMKCKEQGHQSKDCQNPDHMNKRVCFNCGDEGHPT 434
Query: 251 RECTK 255
+ C +
Sbjct: 435 KGCPQ 439
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 27/143 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C C GH +++C +N ++ N C+NCGD H + CP+ Q S NN++
Sbjct: 399 LCMKCKEQGHQSKDC----QNPDHMNKRV-CFNCGDEGHPTKGCPQNQQNSFRNNNDTNS 453
Query: 190 ---------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGA 234
CFKC GH A DC C+ C ++ H +++C
Sbjct: 454 TYQKPGGFQQREKPKCFKCQKEGHRAIDCTEL-------PYCFKCLQNIHSSKECDHPEN 506
Query: 235 GGGGSCFNCGKPGHFARECTKVA 257
CFNCG H +++C KV
Sbjct: 507 SKKRVCFNCGDEKHCSKDCPKVQ 529
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
GC+ CG+ H +RDC G S NNS CF CG H++++C +CY
Sbjct: 304 GCFKCGEEGHMSRDCSN--GNSREKKNNS--CFNCGEITHMSKECP--NPKKPRSIQCYK 357
Query: 219 CGKSGHLARDCGAGGA--GGGGSCFNCGKPGHFARECTK 255
C + GH+A+DC CF C K GH + +CT+
Sbjct: 358 CQQEGHMAKDCPNAQQYQARVMKCFLCKKEGHKSNDCTE 396
>gi|332526824|ref|ZP_08402924.1| cold-shock DNA-binding protein family protein [Rubrivivax
benzoatilyticus JA2]
gi|332111225|gb|EGJ11257.1| cold-shock DNA-binding protein family protein [Rubrivivax
benzoatilyticus JA2]
Length = 69
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 39/54 (72%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+T TG V WF+ +KGYGFI PD GG DLF H K I+ G++TL ENQ VEF+V
Sbjct: 1 MTTETGTVKWFNESKGYGFITPDAGGKDLFAHFKEIQGTGFKTLAENQRVEFEV 54
>gi|224824174|ref|ZP_03697282.1| cold-shock DNA-binding domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|347540125|ref|YP_004847550.1| cold-shock DNA-binding domain containing protein
[Pseudogulbenkiania sp. NH8B]
gi|224603593|gb|EEG09768.1| cold-shock DNA-binding domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|345643303|dbj|BAK77136.1| cold-shock DNA-binding domain protein [Pseudogulbenkiania sp.
NH8B]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+TG V WF+ +KG+GFI PD+GG D+F H IK++G++TL ENQ V FDV + GK
Sbjct: 2 ATGTVKWFNDSKGFGFITPDEGGDDIFAHFSQIKANGFKTLAENQRVSFDVTMGPKGK 59
>gi|58266946|ref|XP_570629.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226862|gb|AAW43322.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 287
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 36/155 (23%)
Query: 128 GVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNS 187
G +CYNC GH + C R + + CY CG H DCP +G
Sbjct: 134 GRLCYNCREPGHESTNCPQPR-----STDGKQCYACGGVGHVKSDCPSMRGAFGPGQK-- 186
Query: 188 GGCFKCGGYGHLARDCITRG-----------------------SGGGGGGRCYNCGKSGH 224
CFKCG GHLAR+C G + G +CY C H
Sbjct: 187 --CFKCGRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKCYRCNGENH 244
Query: 225 LARDCGA----GGAGGGGSCFNCGKPGHFARECTK 255
LARDC A C+ C + GH AR+CT+
Sbjct: 245 LARDCLAPRDEAAILASKKCYKCQETGHIARDCTQ 279
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 111 KGNNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
+G + ++ G PG C+ C +GH+A C + R CYNC +P H
Sbjct: 96 RGRSKTKTMFGAAAVPGSRQGCFKCGNLGHIAENCQAPGRL---------CYNCREPGHE 146
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ +CP+ + + + C+ CGG GH+ DC + G G +C+ CG+ GHLAR+C
Sbjct: 147 STNCPQPR------STDGKQCYACGGVGHVKSDCPSMRGAFGPGQKCFKCGRPGHLAREC 200
Query: 230 GAGG 233
G
Sbjct: 201 TVPG 204
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRG------------------SGGGGGGRCYNCG 220
G+ + + GCFKCG GH+A +C G G +CY CG
Sbjct: 106 GAAAVPGSRQGCFKCGNLGHIAENCQAPGRLCYNCREPGHESTNCPQPRSTDGKQCYACG 165
Query: 221 KSGHLARDCGA--GGAGGGGSCFNCGKPGHFARECT 254
GH+ DC + G G G CF CG+PGH ARECT
Sbjct: 166 GVGHVKSDCPSMRGAFGPGQKCFKCGRPGHLARECT 201
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
V CY C+G H+AR+C + R + S CY C + H ARDC ++
Sbjct: 234 VKCYRCNGENHLARDCLAPRDEAAILA-SKKCYKCQETGHIARDCTQE 280
>gi|312138659|ref|YP_004005995.1| cold shock protein [Rhodococcus equi 103S]
gi|325676272|ref|ZP_08155951.1| cold shock protein CspA [Rhodococcus equi ATCC 33707]
gi|311887998|emb|CBH47310.1| cold shock protein [Rhodococcus equi 103S]
gi|325552833|gb|EGD22516.1| cold shock protein CspA [Rhodococcus equi ATCC 33707]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PDDG AD+FVH +I+++G+RTL ENQ V F++ G Q
Sbjct: 2 AEGTVKWFNAEKGFGFIAPDDGSADVFVHYSAIQTNGFRTLEENQRVRFEIGQGNKGP-Q 60
Query: 67 ALDVTA 72
A DVTA
Sbjct: 61 ATDVTA 66
>gi|293401962|ref|ZP_06646102.1| conserved domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|373451286|ref|ZP_09543211.1| cold shock-like protein CspD [Eubacterium sp. 3_1_31]
gi|291304620|gb|EFE45869.1| conserved domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|371968558|gb|EHO86013.1| cold shock-like protein CspD [Eubacterium sp. 3_1_31]
Length = 66
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STGKV WF+ KGYGFI D+G D+FVH SI+SDG+RTL E Q V FDV +++D Q
Sbjct: 2 STGKVKWFNAEKGYGFITSDEG-KDVFVHYSSIQSDGFRTLEEGQRVSFDV-VDSDRGQQ 59
Query: 67 ALDVTA 72
A +V A
Sbjct: 60 AANVVA 65
>gi|350569851|ref|ZP_08938244.1| cold shock protein CspA [Propionibacterium avidum ATCC 25577]
gi|348659775|gb|EGY76500.1| cold shock protein CspA [Propionibacterium avidum ATCC 25577]
Length = 68
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG V WF+ KGYGFI+PDDG AD+F H +I S GYR+L E VE+DV+
Sbjct: 2 ATGTVKWFNADKGYGFIQPDDGSADVFAHFSAINSSGYRSLDEGDQVEYDVE 53
>gi|229819166|ref|YP_002880692.1| cold-shock DNA-binding domain-containing protein [Beutenbergia
cavernae DSM 12333]
gi|229565079|gb|ACQ78930.1| cold-shock DNA-binding domain protein [Beutenbergia cavernae DSM
12333]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI P+DG AD+F H +I +DG+R+L ENQ VEFDV
Sbjct: 2 TIGTVKWFNAEKGFGFIAPEDGSADVFAHYSAIVADGFRSLEENQRVEFDV 52
>gi|295677819|ref|YP_003606343.1| cold-shock protein [Burkholderia sp. CCGE1002]
gi|295437662|gb|ADG16832.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1002]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD GG DLF H I+ DG++TL ENQ V F+V+ GK A
Sbjct: 3 TGTVKWFNDAKGFGFITPDGGGEDLFAHFSEIRVDGFKTLQENQKVTFEVKTGPKGKQAA 62
>gi|238757593|ref|ZP_04618777.1| Cold shock-like protein cspD [Yersinia aldovae ATCC 35236]
gi|238704098|gb|EEP96631.1| Cold shock-like protein cspD [Yersinia aldovae ATCC 35236]
Length = 85
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62
Query: 68 ------LDVTAPGGA 76
LDV +P A
Sbjct: 63 LIVPLVLDVISPEAA 77
>gi|256391097|ref|YP_003112661.1| cold-shock DNA-binding domain-containing protein [Catenulispora
acidiphila DSM 44928]
gi|256357323|gb|ACU70820.1| cold-shock DNA-binding domain protein [Catenulispora acidiphila
DSM 44928]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TGKV WF+G KG+GFI D GG D+FVH +I GYR L ENQ+VEF+V G Q
Sbjct: 2 ATGKVKWFNGEKGFGFIEQDGGGPDVFVHFSAISGSGYRNLEENQAVEFNVTQGPKGP-Q 60
Query: 67 ALDV 70
A DV
Sbjct: 61 AEDV 64
>gi|145589930|ref|YP_001156527.1| cold-shock DNA-binding domain-containing protein
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|171464060|ref|YP_001798173.1| cold-shock DNA-binding domain-containing protein
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|456064063|ref|YP_007503033.1| cold-shock DNA-binding domain protein [beta proteobacterium CB]
gi|145048336|gb|ABP34963.1| cold-shock DNA-binding protein family [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|171193598|gb|ACB44559.1| cold-shock DNA-binding domain protein [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|455441360|gb|AGG34298.1| cold-shock DNA-binding domain protein [beta proteobacterium CB]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI+PDDG +LF H +I G++TL ENQ V FD+ GK Q
Sbjct: 2 ATGIVKWFNDAKGFGFIKPDDGEEELFAHFSAITMPGFKTLKENQKVTFDITQGPKGK-Q 60
Query: 67 ALDVTA 72
A ++ A
Sbjct: 61 ATNIQA 66
>gi|386829541|ref|ZP_10116648.1| cold shock protein [Beggiatoa alba B18LD]
gi|386829542|ref|ZP_10116649.1| cold shock protein [Beggiatoa alba B18LD]
gi|386430425|gb|EIJ44253.1| cold shock protein [Beggiatoa alba B18LD]
gi|386430426|gb|EIJ44254.1| cold shock protein [Beggiatoa alba B18LD]
Length = 67
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
TG V WF+ +KG+GF+ PDDGG D+FVH +I+S G++TL E Q+V+F+ Q+ G
Sbjct: 3 TGTVKWFNESKGFGFLAPDDGGKDVFVHFSTIQSSGFKTLKEGQAVQFEAQMGPKG 58
>gi|383459397|ref|YP_005373386.1| cold-shock protein CspA [Corallococcus coralloides DSM 2259]
gi|380732445|gb|AFE08447.1| cold-shock protein CspA [Corallococcus coralloides DSM 2259]
Length = 68
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
++G V WF+ AKG+GFI D GG D+F H +I+SDG+RTL E Q VEFDV+
Sbjct: 2 ASGTVKWFNDAKGFGFITQDSGGPDVFCHHTAIQSDGFRTLAEGQKVEFDVK 53
>gi|303257728|ref|ZP_07343740.1| putative cold-shock protein [Burkholderiales bacterium 1_1_47]
gi|303257776|ref|ZP_07343787.1| putative cold-shock protein [Burkholderiales bacterium 1_1_47]
gi|331000987|ref|ZP_08324623.1| putative cold shock domain protein CspD [Parasutterella
excrementihominis YIT 11859]
gi|302859458|gb|EFL82538.1| putative cold-shock protein [Burkholderiales bacterium 1_1_47]
gi|302859698|gb|EFL82777.1| putative cold-shock protein [Burkholderiales bacterium 1_1_47]
gi|329569762|gb|EGG51526.1| putative cold shock domain protein CspD [Parasutterella
excrementihominis YIT 11859]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 41/58 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+TG V WF+ AKGYGFI PDDGG DLF H +IK DG++TL + Q V FD++ GK
Sbjct: 2 ATGTVKWFNDAKGYGFITPDDGGEDLFAHFSAIKMDGFKTLKQGQRVTFDLKEGEKGK 59
>gi|295700731|ref|YP_003608624.1| cold-shock protein [Burkholderia sp. CCGE1002]
gi|295439944|gb|ADG19113.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1002]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDGG DLF H I++ G+++L ENQ V F+V+ GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEIQASGFKSLQENQKVSFEVKQGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|256090146|ref|XP_002581074.1| cellular nucleic acid binding protein [Schistosoma mansoni]
Length = 141
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 19/114 (16%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------CFKCGGYGHLARDCITRGSGGG 211
GC+NCG +H+ARDC +G G CF CGG GH ARDC G G
Sbjct: 5 GCFNCGGLDHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGD 64
Query: 212 GG----------GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G GRCY+CG+SGH+ R+C + C+ C K GHFAR+CT+
Sbjct: 65 SGYNGGGGGGGGGRCYSCGESGHIVRNCPNNNS--DTLCYRCNKYGHFARDCTE 116
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------CYNCGDPEHFARDCPRQ-QGGSN 181
C+NC G+ H AR+CTS R + G C+NCG HFARDC Q G +
Sbjct: 6 CFNCGGLDHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGDS 65
Query: 182 SYNNNSGG-----CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
YN GG C+ CG GH+ R+C S CY C K GH ARDC G G
Sbjct: 66 GYNGGGGGGGGGRCYSCGESGHIVRNCPNNNS----DTLCYRCNKYGHFARDCTESG-GS 120
Query: 237 GGSCFNCGKPGHFARECTKVA 257
G C+ C GH A C A
Sbjct: 121 GPQCYKCHGYGHIASRCNVEA 141
>gi|409356559|ref|ZP_11234946.1| cold-shock DNA-binding domain-containing protein [Dietzia
alimentaria 72]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KG+GFI PDDG AD+F H +I+ GYR+L ENQ V FDV A G Q
Sbjct: 2 ATGTVKWFNADKGFGFIAPDDGSADVFAHFSAIQGSGYRSLEENQQVSFDVAQGAKG-LQ 60
Query: 67 ALDVTA 72
A ++TA
Sbjct: 61 AENITA 66
>gi|390576764|ref|ZP_10256814.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|420247035|ref|ZP_14750454.1| cold shock protein [Burkholderia sp. BT03]
gi|389931342|gb|EIM93420.1| cold-shock DNA-binding domain-containing protein [Burkholderia
terrae BS001]
gi|398072471|gb|EJL63685.1| cold shock protein [Burkholderia sp. BT03]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD GG DLF H I+ +G++TL ENQ V +DV+ GK A
Sbjct: 3 TGTVKWFNDAKGFGFITPDAGGEDLFAHFSEIRVEGFKTLQENQKVTYDVKTGPKGKQAA 62
>gi|269793596|ref|YP_003313051.1| cold-shock DNA-binding protein family [Sanguibacter keddieii DSM
10542]
gi|269095781|gb|ACZ20217.1| cold-shock DNA-binding protein family [Sanguibacter keddieii DSM
10542]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI P+DG AD+F H +I+S GYR+L ENQ VEFD+
Sbjct: 2 AVGTVKWFNAEKGFGFIAPEDGSADVFAHYSAIQSSGYRSLDENQKVEFDI 52
>gi|54303445|ref|YP_133438.1| cold shock protein [Photobacterium profundum SS9]
gi|46916875|emb|CAG23638.1| putative cold shock protein [Photobacterium profundum SS9]
Length = 104
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
++ +TG V WF+ KG+GFI D+GGAD+FVH ++I S+G++TL E Q V F+V+ G
Sbjct: 36 MSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQKG 95
Query: 64 KYQALDVTA 72
QA +V A
Sbjct: 96 -LQAANVVA 103
>gi|312962258|ref|ZP_07776750.1| cold-shock protein, DNA-binding [Pseudomonas fluorescens WH6]
gi|311283595|gb|EFQ62184.1| cold-shock protein, DNA-binding [Pseudomonas fluorescens WH6]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG V WF+ KG+GFI D GGAD+FVH +I+SDG++TL ENQ VEF+++
Sbjct: 2 ATGTVKWFNAEKGFGFITQDGGGADVFVHFSAIQSDGFKTLEENQKVEFEIE 53
>gi|227549696|ref|ZP_03979745.1| cold-shock protein [Corynebacterium lipophiloflavum DSM 44291]
gi|227078192|gb|EEI16155.1| cold-shock protein [Corynebacterium lipophiloflavum DSM 44291]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ KG+GFI PDDG AD+FVH I+ +G+RTL ENQ VEF++ A G
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGSADVFVHYSEIQGNGFRTLEENQQVEFEIGDGAKG 58
>gi|357398842|ref|YP_004910767.1| cold-shock protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386354886|ref|YP_006053132.1| cold shock-like protein CspD [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337765251|emb|CCB73960.1| cold-shock protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365805394|gb|AEW93610.1| cold shock-like protein CspD [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG V WF+ AKG+G I PDDGG DLF H I++DG+++L ENQ VE++V+
Sbjct: 2 ATGIVRWFNDAKGFGLIIPDDGGEDLFAHFSEIRTDGFKSLQENQKVEYEVK 53
>gi|308463757|ref|XP_003094150.1| hypothetical protein CRE_13706 [Caenorhabditis remanei]
gi|308248141|gb|EFO92093.1| hypothetical protein CRE_13706 [Caenorhabditis remanei]
Length = 158
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-CYNCGDPEHFARDCPR------QQGGSNSY 183
CY C GH++R C ++ G CYNC + HF+RDCP+ Q+ ++
Sbjct: 6 CYKCQQPGHISRNCPQREQDGGRRGGGGSTCYNCQETGHFSRDCPKGGSGGGQRDRNSGG 65
Query: 184 NNNSGGCFKCGGYGHLARDCITRGS------------------GGGGGGRCYNCGKSGHL 225
G C+ CGG GH +RDC + S GG +CYNCG++GH+
Sbjct: 66 GGGGGSCYNCGGRGHYSRDCPSARSEEGSGSRGYGGGGRGGGSRSFGGQKCYNCGRNGHI 125
Query: 226 ARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
+R+C G+ C+NC + GH +R+C N
Sbjct: 126 SRECTESGSAEEKRCYNCQETGHISRDCPTTNN 158
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 70/174 (40%), Gaps = 53/174 (30%)
Query: 77 PVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVVCYNCDG 136
P H S+ N R +GG G GG CYNC
Sbjct: 12 PGHISR------------------------------NCPQREQDGGRRGGGGSTCYNCQE 41
Query: 137 VGHVARECT-------SNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
GH +R+C RNS G CYNCG H++RDCP + S + GG
Sbjct: 42 TGHFSRDCPKGGSGGGQRDRNSGGGGGGGSCYNCGGRGHYSRDCPSARSEEGSGSRGYGG 101
Query: 190 --------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
C+ CG GH++R+C SG RCYNC ++GH++RDC
Sbjct: 102 GGRGGGSRSFGGQKCYNCGRNGHISRECTE--SGSAEEKRCYNCQETGHISRDC 153
>gi|260775771|ref|ZP_05884667.1| putative cold-shock DNA-binding domain protein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260608187|gb|EEX34356.1| putative cold-shock DNA-binding domain protein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 70
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+G AD+FVH +SI SDG++TL E Q V F+V+ G
Sbjct: 4 KTTGSVKWFNETKGFGFIAPDNGTADVFVHFRSIASDGFKTLAEGQKVAFNVEQGGKGP- 62
Query: 66 QALDVT 71
QA DVT
Sbjct: 63 QAADVT 68
>gi|448242583|ref|YP_007406636.1| hypothetical protein SMWW4_v1c28220 [Serratia marcescens WW4]
gi|445212947|gb|AGE18617.1| hypothetical protein SMWW4_v1c28220 [Serratia marcescens WW4]
gi|453065297|gb|EMF06260.1| cold shock protein [Serratia marcescens VGH107]
gi|453066331|gb|EMF07278.1| cold shock protein [Serratia marcescens VGH107]
gi|453066922|gb|EMF07840.1| cold shock protein [Serratia marcescens VGH107]
Length = 69
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+++ TG V WF+ +KG+GFI P DG D+FVH +I SDG++TL E Q VEF +Q
Sbjct: 1 MSKITGHVKWFNESKGFGFITPADGSKDVFVHFSAIVSDGFKTLAEGQQVEFSIQ 55
>gi|167564263|ref|ZP_02357179.1| cold-shock DNA-binding domain protein [Burkholderia oklahomensis
EO147]
gi|167571414|ref|ZP_02364288.1| cold-shock DNA-binding domain protein [Burkholderia oklahomensis
C6786]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ AKG+GFI P+ GG DLF H I+S+G++TL ENQ VEF+V+ G
Sbjct: 2 ATGTVKWFNDAKGFGFITPEGGGEDLFAHFSEIRSEGFKTLQENQKVEFEVKTGPKG 58
>gi|254252966|ref|ZP_04946284.1| Cold-shock protein [Burkholderia dolosa AUO158]
gi|416938772|ref|ZP_11934331.1| cold shock-like protein [Burkholderia sp. TJI49]
gi|124895575|gb|EAY69455.1| Cold-shock protein [Burkholderia dolosa AUO158]
gi|325524697|gb|EGD02687.1| cold shock-like protein [Burkholderia sp. TJI49]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|161525563|ref|YP_001580575.1| cold-shock DNA-binding domain-containing protein [Burkholderia
multivorans ATCC 17616]
gi|189349709|ref|YP_001945337.1| CspA family cold shock protein [Burkholderia multivorans ATCC
17616]
gi|221201211|ref|ZP_03574251.1| conserved domain protein [Burkholderia multivorans CGD2M]
gi|221206335|ref|ZP_03579348.1| conserved domain protein [Burkholderia multivorans CGD2]
gi|221213617|ref|ZP_03586591.1| conserved domain protein [Burkholderia multivorans CGD1]
gi|421470767|ref|ZP_15919123.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
ATCC BAA-247]
gi|421478115|ref|ZP_15925885.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
CF2]
gi|160342992|gb|ABX16078.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
ATCC 17616]
gi|189333731|dbj|BAG42801.1| CspA family cold shock protein [Burkholderia multivorans ATCC
17616]
gi|221166406|gb|EED98878.1| conserved domain protein [Burkholderia multivorans CGD1]
gi|221173644|gb|EEE06078.1| conserved domain protein [Burkholderia multivorans CGD2]
gi|221179061|gb|EEE11468.1| conserved domain protein [Burkholderia multivorans CGD2M]
gi|400225262|gb|EJO55439.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
CF2]
gi|400227006|gb|EJO57031.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
ATCC BAA-247]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|115350919|ref|YP_772758.1| cold-shock DNA-binding domain-containing protein [Burkholderia
ambifaria AMMD]
gi|170698521|ref|ZP_02889592.1| cold-shock DNA-binding domain protein [Burkholderia ambifaria
IOP40-10]
gi|171315542|ref|ZP_02904778.1| cold-shock DNA-binding domain protein [Burkholderia ambifaria
MEX-5]
gi|172059932|ref|YP_001807584.1| cold-shock DNA-binding domain-containing protein [Burkholderia
ambifaria MC40-6]
gi|115280907|gb|ABI86424.1| cold-shock DNA-binding protein family [Burkholderia ambifaria
AMMD]
gi|170136605|gb|EDT04862.1| cold-shock DNA-binding domain protein [Burkholderia ambifaria
IOP40-10]
gi|171099379|gb|EDT44117.1| cold-shock DNA-binding domain protein [Burkholderia ambifaria
MEX-5]
gi|171992449|gb|ACB63368.1| cold-shock DNA-binding domain protein [Burkholderia ambifaria
MC40-6]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V F+V+L GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFEVKLGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|119776095|ref|YP_928835.1| cold-shock DNA-binding domain-containing protein [Shewanella
amazonensis SB2B]
gi|119768595|gb|ABM01166.1| cold-shock DNA-binding protein family [Shewanella amazonensis
SB2B]
Length = 70
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+GGAD+FVH ++I DG++TL E Q V+F+V+ G
Sbjct: 4 KTTGSVKWFNETKGFGFITPDNGGADVFVHFRAIAVDGFKTLAEGQQVQFNVEQGNKGP- 62
Query: 66 QALDVT 71
QA +VT
Sbjct: 63 QAANVT 68
>gi|332142943|ref|YP_004428681.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|332143012|ref|YP_004428750.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|406598318|ref|YP_006749448.1| cold shock-like protein cspG [Alteromonas macleodii ATCC 27126]
gi|407685311|ref|YP_006800485.1| cold shock-like protein cspG [Alteromonas macleodii str. 'English
Channel 673']
gi|407689247|ref|YP_006804420.1| cold shock-like protein cspG [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407701549|ref|YP_006826336.1| cold shock-like protein cspG [Alteromonas macleodii str. 'Black
Sea 11']
gi|410863222|ref|YP_006978456.1| cold shock-like protein cspG [Alteromonas macleodii AltDE1]
gi|327552965|gb|AEA99683.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|327553034|gb|AEA99752.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Deep ecotype']
gi|406375639|gb|AFS38894.1| putative cold shock-like protein cspG [Alteromonas macleodii ATCC
27126]
gi|407246922|gb|AFT76108.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'English Channel 673']
gi|407250696|gb|AFT79881.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Black Sea 11']
gi|407292627|gb|AFT96939.1| putative cold shock-like protein cspG [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|410820484|gb|AFV87101.1| putative cold shock-like protein cspG [Alteromonas macleodii
AltDE1]
Length = 69
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ TG V WF+ KGYGF+ D+GG D+FVH ++I SDGY+TL E Q VEF+V+ E
Sbjct: 1 MSKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIISDGYKTLPEGQRVEFEVE-EGQK 59
Query: 64 KYQALDVTA 72
QA +V A
Sbjct: 60 GLQAANVQA 68
>gi|404374316|ref|ZP_10979533.1| cold shock-like protein CspG [Escherichia sp. 1_1_43]
gi|404292147|gb|EJZ48982.1| cold shock-like protein CspG [Escherichia sp. 1_1_43]
Length = 70
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDIFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|53720688|ref|YP_109674.1| cold shock-like protein CspD [Burkholderia pseudomallei K96243]
gi|53723938|ref|YP_104309.1| cold-shock domain-contain protein [Burkholderia mallei ATCC
23344]
gi|67641928|ref|ZP_00440693.1| cold-shock DNA-binding domain protein [Burkholderia mallei GB8
horse 4]
gi|76811091|ref|YP_334974.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1710b]
gi|83720047|ref|YP_443443.1| cold-shock domain-contain protein [Burkholderia thailandensis
E264]
gi|124383483|ref|YP_001027729.1| cold-shock domain-contain protein [Burkholderia mallei NCTC
10229]
gi|126440312|ref|YP_001060602.1| CspE-like protein [Burkholderia pseudomallei 668]
gi|126449743|ref|YP_001082701.1| cold-shock domain-contain protein [Burkholderia mallei NCTC
10247]
gi|126452091|ref|YP_001067852.1| cold-shock domain-contain protein [Burkholderia pseudomallei
1106a]
gi|134283275|ref|ZP_01769976.1| cold-shock domain family protein [Burkholderia pseudomallei 305]
gi|167582495|ref|ZP_02375369.1| cold-shock domain family protein [Burkholderia thailandensis
TXDOH]
gi|167620585|ref|ZP_02389216.1| cold-shock domain family protein [Burkholderia thailandensis Bt4]
gi|167721415|ref|ZP_02404651.1| cold-shock domain family protein [Burkholderia pseudomallei DM98]
gi|167740382|ref|ZP_02413156.1| cold-shock domain family protein [Burkholderia pseudomallei 14]
gi|167817600|ref|ZP_02449280.1| cold-shock domain family protein [Burkholderia pseudomallei 91]
gi|167826001|ref|ZP_02457472.1| cold-shock domain family protein [Burkholderia pseudomallei 9]
gi|167896076|ref|ZP_02483478.1| cold-shock domain family protein [Burkholderia pseudomallei 7894]
gi|167904462|ref|ZP_02491667.1| cold-shock domain family protein [Burkholderia pseudomallei NCTC
13177]
gi|167912723|ref|ZP_02499814.1| cold-shock domain family protein [Burkholderia pseudomallei 112]
gi|167920683|ref|ZP_02507774.1| cold-shock domain family protein [Burkholderia pseudomallei
BCC215]
gi|217424876|ref|ZP_03456373.1| cold-shock domain family protein [Burkholderia pseudomallei 576]
gi|226198244|ref|ZP_03793815.1| cold-shock domain family protein [Burkholderia pseudomallei
Pakistan 9]
gi|237813987|ref|YP_002898438.1| cold-shock DNA-binding domain protein [Burkholderia pseudomallei
MSHR346]
gi|242317385|ref|ZP_04816401.1| cold-shock domain family protein [Burkholderia pseudomallei
1106b]
gi|254175079|ref|ZP_04881740.1| cold-shock domain family protein [Burkholderia mallei ATCC 10399]
gi|254180483|ref|ZP_04887081.1| cold-shock domain family protein [Burkholderia pseudomallei 1655]
gi|254190465|ref|ZP_04896973.1| cold-shock domain family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254198469|ref|ZP_04904890.1| cold-shock domain family protein [Burkholderia pseudomallei S13]
gi|254201381|ref|ZP_04907745.1| cold-shock domain family protein [Burkholderia mallei FMH]
gi|254206723|ref|ZP_04913074.1| cold-shock domain family protein [Burkholderia mallei JHU]
gi|254258676|ref|ZP_04949730.1| cold-shock domain family protein [Burkholderia pseudomallei
1710a]
gi|254300718|ref|ZP_04968163.1| cold-shock domain family protein [Burkholderia pseudomallei 406e]
gi|254357313|ref|ZP_04973587.1| cold-shock domain family protein [Burkholderia mallei 2002721280]
gi|257137775|ref|ZP_05586037.1| cold-shock DNA-binding domain protein [Burkholderia thailandensis
E264]
gi|386860338|ref|YP_006273287.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1026b]
gi|403520292|ref|YP_006654426.1| cold-shock domain-contain protein [Burkholderia pseudomallei
BPC006]
gi|418375654|ref|ZP_12965707.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 354a]
gi|418537955|ref|ZP_13103584.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1026a]
gi|418545624|ref|ZP_13110876.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1258a]
gi|418545818|ref|ZP_13111060.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1258b]
gi|418552264|ref|ZP_13117136.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 354e]
gi|52211102|emb|CAH37090.1| cold shock-like protein CspD [Burkholderia pseudomallei K96243]
gi|52427361|gb|AAU47954.1| cold-shock domain family protein [Burkholderia mallei ATCC 23344]
gi|76580544|gb|ABA50019.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1710b]
gi|83653872|gb|ABC37935.1| cold-shock domain family protein-related protein [Burkholderia
thailandensis E264]
gi|124291503|gb|ABN00772.1| cold-shock DNA-binding domain protein [Burkholderia mallei NCTC
10229]
gi|126219805|gb|ABN83311.1| CspE-like protein [Burkholderia pseudomallei 668]
gi|126225733|gb|ABN89273.1| cold-shock domain family protein [Burkholderia pseudomallei
1106a]
gi|126242613|gb|ABO05706.1| cold-shock DNA-binding domain protein [Burkholderia mallei NCTC
10247]
gi|134245470|gb|EBA45563.1| cold-shock domain family protein [Burkholderia pseudomallei 305]
gi|147747275|gb|EDK54351.1| cold-shock domain family protein [Burkholderia mallei FMH]
gi|147752265|gb|EDK59331.1| cold-shock domain family protein [Burkholderia mallei JHU]
gi|148026377|gb|EDK84462.1| cold-shock domain family protein [Burkholderia mallei 2002721280]
gi|157810480|gb|EDO87650.1| cold-shock domain family protein [Burkholderia pseudomallei 406e]
gi|157938141|gb|EDO93811.1| cold-shock domain family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160696124|gb|EDP86094.1| cold-shock domain family protein [Burkholderia mallei ATCC 10399]
gi|169655209|gb|EDS87902.1| cold-shock domain family protein [Burkholderia pseudomallei S13]
gi|184211022|gb|EDU08065.1| cold-shock domain family protein [Burkholderia pseudomallei 1655]
gi|217392332|gb|EEC32357.1| cold-shock domain family protein [Burkholderia pseudomallei 576]
gi|225929764|gb|EEH25780.1| cold-shock domain family protein [Burkholderia pseudomallei
Pakistan 9]
gi|237506828|gb|ACQ99146.1| cold-shock DNA-binding domain protein [Burkholderia pseudomallei
MSHR346]
gi|238522943|gb|EEP86385.1| cold-shock DNA-binding domain protein [Burkholderia mallei GB8
horse 4]
gi|242140624|gb|EES27026.1| cold-shock domain family protein [Burkholderia pseudomallei
1106b]
gi|254217365|gb|EET06749.1| cold-shock domain family protein [Burkholderia pseudomallei
1710a]
gi|385345542|gb|EIF52240.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1258a]
gi|385349125|gb|EIF55716.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1026a]
gi|385366173|gb|EIF71810.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1258b]
gi|385373343|gb|EIF78394.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 354e]
gi|385378137|gb|EIF82639.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 354a]
gi|385657466|gb|AFI64889.1| cold shock transcription regulator protein [Burkholderia
pseudomallei 1026b]
gi|403075934|gb|AFR17514.1| cold-shock domain-contain protein [Burkholderia pseudomallei
BPC006]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ AKG+GFI P+ GG DLF H I+ DG++TL ENQ VEF+V+ G
Sbjct: 2 ATGTVKWFNDAKGFGFITPEGGGEDLFAHFSEIRVDGFKTLQENQKVEFEVKTGPKG 58
>gi|383826043|ref|ZP_09981185.1| cold shock protein A CspA [Mycobacterium xenopi RIVM700367]
gi|383333805|gb|EID12253.1| cold shock protein A CspA [Mycobacterium xenopi RIVM700367]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WF+ KG+GFI P+DG AD+FVH I+ G+RTL ENQ VEF+V G QA
Sbjct: 4 GTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQRVEFEVGQSPKGP-QAT 62
Query: 69 DV 70
DV
Sbjct: 63 DV 64
>gi|221222214|gb|ACM09768.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 143
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---CFKCGGYGHLARDCITRGSGGGG 212
+S C+ CG P H+ ++CP G G C++CG GH+ARDC
Sbjct: 4 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDA--- 60
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNC +SGH++RDC C++CGK GH + C KV
Sbjct: 61 ---CYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHIQKLCDKV 101
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C GH+AR+C CYNC H +RDC +
Sbjct: 39 LFCYRCGEQGHIARDC---------EQTEDACYNCHRSGHISRDCKEPK------KEREQ 83
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CG GH+ + C +CY CG+ GH+A C +C+ CG GH
Sbjct: 84 CCYSCGKAGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASEV---NCYKCGNTGH 132
Query: 249 FARECTKVAN 258
A+ECT A
Sbjct: 133 LAKECTIEAT 142
>gi|91223643|ref|ZP_01258908.1| cold shock transcriptional regulator CspA [Vibrio alginolyticus
12G01]
gi|91191729|gb|EAS77993.1| cold shock transcriptional regulator CspA [Vibrio alginolyticus
12G01]
Length = 70
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ +KG+GFI PD+GG+DLFVH KSI SDG++TL E Q V F V+ G
Sbjct: 4 KSTGLVKWFNESKGFGFITPDNGGSDLFVHFKSIVSDGFKTLSEGQKVSFVVEQGNKGP- 62
Query: 66 QALDVT 71
QA +VT
Sbjct: 63 QADNVT 68
>gi|357114909|ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
Length = 301
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 60/134 (44%), Gaps = 27/134 (20%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCP--------RQQGGS 180
+ C NC GH AR+C S + C NC P HFA +C ++ G
Sbjct: 105 LSCKNCRRSGHFARDCPS----------ASTCNNCNLPGHFAAECTSKTVCWNCKKSGHI 154
Query: 181 NSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSC 240
+ N C C GHLARDC T GS C NC + GH+A DC A C
Sbjct: 155 ATECTNEALCHTCSKSGHLARDCPTSGSAK----LCNNCFQPGHIAVDCTNDRA-----C 205
Query: 241 FNCGKPGHFARECT 254
NC + GH ARECT
Sbjct: 206 NNCRQSGHIARECT 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 57/149 (38%), Gaps = 38/149 (25%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN--- 185
VC+NC GH+A ECT N C+ C H ARDCP G + NN
Sbjct: 143 TVCWNCKKSGHIATECT----------NEALCHTCSKSGHLARDCP-TSGSAKLCNNCFQ 191
Query: 186 ---------NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA----- 231
N C C GH+AR+C C C SGHLAR C
Sbjct: 192 PGHIAVDCTNDRACNNCRQSGHIARECT-------NDPVCNLCNVSGHLARACPKTTLAS 244
Query: 232 ---GGAGGGGSCFNCGKPGHFARECTKVA 257
GG C CG+PGH +R C
Sbjct: 245 EIHGGPFRDILCRMCGQPGHISRNCMATV 273
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C C GH ARDC C NC GH A +C + C+NC K GH
Sbjct: 106 SCKNCRRSGHFARDC-------PSASTCNNCNLPGHFAAECTSKTV-----CWNCKKSGH 153
Query: 249 FARECTKVA 257
A ECT A
Sbjct: 154 IATECTNEA 162
>gi|359766304|ref|ZP_09270122.1| putative cold shock protein [Gordonia polyisoprenivorans NBRC
16320]
gi|378716832|ref|YP_005281721.1| cold-shock protein [Gordonia polyisoprenivorans VH2]
gi|359316352|dbj|GAB22955.1| putative cold shock protein [Gordonia polyisoprenivorans NBRC
16320]
gi|375751535|gb|AFA72355.1| cold-shock protein [Gordonia polyisoprenivorans VH2]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PD+ G D+FVH +I +GYRTL E Q VEFDV+ A G Q
Sbjct: 2 AQGTVKWFNGEKGFGFIAPDEQGEDVFVHFSAITGNGYRTLEEAQRVEFDVEQGAKG-LQ 60
Query: 67 ALDVTA 72
A +V+A
Sbjct: 61 ATNVSA 66
>gi|339323771|ref|YP_004682665.1| cold shock-like protein CspA [Cupriavidus necator N-1]
gi|338170379|gb|AEI81433.1| cold shock-like protein CspA [Cupriavidus necator N-1]
Length = 84
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI+PD GG DLF H I++DG+++L ENQ V+F+V+ G QA
Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKG-LQA 78
Query: 68 LDVT 71
++T
Sbjct: 79 ANIT 82
>gi|147828626|emb|CAN73043.1| hypothetical protein VITISV_005152 [Vitis vinifera]
Length = 513
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 54/128 (42%), Gaps = 25/128 (19%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
CYNC GH A C S +R C+ CG EH A+ C ++ C
Sbjct: 252 CYNCGEEGHNAVNCASVKRKK-------PCFVCGSLEHNAKQCMKE-----------IQC 293
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG-----GSCFNCGK 245
+ C +GHL CI G CY CG+ GH C A SC+ CG+
Sbjct: 294 YICKSFGHLC--CINYVDTGPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRCGE 351
Query: 246 PGHFAREC 253
GHFAREC
Sbjct: 352 QGHFAREC 359
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CYNCG+ H A +C + CF CG H A+ C+ +CY
Sbjct: 250 GACYNCGEEGHNAVNC--------ASVKRKKPCFVCGSLEHNAKQCMKEI-------QCY 294
Query: 218 NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
C GHL SC+ CG+ GH C ++
Sbjct: 295 ICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACARL 333
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 25/63 (39%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP CY C +GH C + CY CG+ HFAR+C S Y+
Sbjct: 311 GPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRCGEQGHFARECKSSTKXSKRYS 370
Query: 185 NNS 187
S
Sbjct: 371 EVS 373
>gi|321173537|gb|ADW77531.1| cold-shock-like protein [Heterodera glycines]
Length = 221
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSI--KSDGYRTLYENQSVEFDVQLEADGKY 65
+G+V WFD +KGYGFI DDGG D+F+H SI K + Y L E Q VEFDV ++ +
Sbjct: 16 SGRVKWFDFSKGYGFITRDDGGQDVFLHASSIVRKVNMYFVLIEGQRVEFDV-IDGEKGR 74
Query: 66 QALDVTAPGGAPVHSSKN-NNT 86
+A V+ PGG V ++ NNT
Sbjct: 75 EAAAVSGPGGIRVGTAIQYNNT 96
>gi|336321966|ref|YP_004601934.1| cold-shock DNA-binding domain protein [[Cellvibrio] gilvus ATCC
13127]
gi|336105547|gb|AEI13366.1| cold-shock DNA-binding domain protein [[Cellvibrio] gilvus ATCC
13127]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDGG D+F H +I+S G+R+L ENQ VEF++
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGGPDVFAHYSAIQSSGFRSLEENQKVEFEI 52
>gi|163792428|ref|ZP_02186405.1| Cold-shock DNA-binding domain protein [alpha proteobacterium
BAL199]
gi|159182133|gb|EDP66642.1| Cold-shock DNA-binding domain protein [alpha proteobacterium
BAL199]
Length = 68
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KGYGFI P+DG AD+FVH +++ G +L E Q V FDV+ +GKY
Sbjct: 2 ATGTVKWFNATKGYGFIEPEDGSADVFVHISAVERAGIASLNEGQKVSFDVERGRNGKYA 61
Query: 67 ALDV 70
A D+
Sbjct: 62 ATDL 65
>gi|120402055|ref|YP_951884.1| cold-shock DNA-binding domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119954873|gb|ABM11878.1| cold-shock DNA-binding protein family [Mycobacterium vanbaalenii
PYR-1]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PD G D+FVH I +GYR+L ENQ VEF+V+ G Q
Sbjct: 2 AQGTVKWFNGDKGFGFIAPDGGAPDVFVHYSEISGNGYRSLEENQRVEFEVEQGNKGP-Q 60
Query: 67 ALDVTA 72
A+ VTA
Sbjct: 61 AVRVTA 66
>gi|440471988|gb|ELQ40888.1| zinc knuckle domain-containing protein [Magnaporthe oryzae Y34]
gi|440479225|gb|ELQ60008.1| zinc knuckle domain-containing protein [Magnaporthe oryzae P131]
Length = 182
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CGG GH++RDC+ G +CYNCG++GH +RDC G C+ C +PGH
Sbjct: 123 CYSCGGVGHMSRDCV-------NGSKCYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHV 175
Query: 250 AREC 253
EC
Sbjct: 176 QAEC 179
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY+C GVGH++R+C N CYNCG+ HF+RDC ++
Sbjct: 122 TCYSCGGVGHMSRDCV----------NGSKCYNCGETGHFSRDCSKRS------TTGEKM 165
Query: 190 CFKCGGYGHLARDC 203
C+KC GH+ +C
Sbjct: 166 CYKCQQPGHVQAEC 179
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 25/84 (29%)
Query: 192 KCGGYGHLARDC--------------------ITRGSGGGGGGRCYNCGKSGHLARDCGA 231
+CG GH+AR+C GG GG CY+CG GH++RDC
Sbjct: 79 QCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSRDC-- 136
Query: 232 GGAGGGGSCFNCGKPGHFARECTK 255
G C+NCG+ GHF+R+C+K
Sbjct: 137 ---VNGSKCYNCGETGHFSRDCSK 157
>gi|403527213|ref|YP_006662100.1| cold shock protein ScoF [Arthrobacter sp. Rue61a]
gi|403229640|gb|AFR29062.1| cold shock protein ScoF [Arthrobacter sp. Rue61a]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDGG D+F H +I S GYR+L ENQ V+FD+
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGGPDVFAHYSAITSSGYRSLEENQKVQFDI 52
>gi|238789632|ref|ZP_04633415.1| Cold shock-like protein cspD [Yersinia frederiksenii ATCC 33641]
gi|238722185|gb|EEQ13842.1| Cold shock-like protein cspD [Yersinia frederiksenii ATCC 33641]
Length = 85
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|383813905|ref|ZP_09969328.1| cold shock protein [Serratia sp. M24T3]
gi|383297103|gb|EIC85414.1| cold shock protein [Serratia sp. M24T3]
Length = 69
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+++ TG+V WF+ +KG+GFI P DG D+FVH +I SDG++TL E Q+VEF +Q
Sbjct: 1 MSKLTGQVKWFNESKGFGFITPADGSKDVFVHFSAINSDGFKTLAEGQNVEFTIQ 55
>gi|372266587|ref|ZP_09502635.1| cold shock protein [Alteromonas sp. S89]
Length = 71
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
R TG V WF+ A+GYGFI +G D+FVH +SI+ DGY+TL E Q+VEF++Q
Sbjct: 4 RVTGTVKWFNNARGYGFITCSEGSEDIFVHYRSIRGDGYKTLNEGQAVEFEMQ 56
>gi|284007335|emb|CBA72699.1| cold shock protein CspE [Arsenophonus nasoniae]
Length = 88
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
++T+ TG V WF+ KG+GFI P+ GG D+FVH +I +G++TL Q VEFD+Q
Sbjct: 19 KMTKITGTVKWFNETKGFGFITPEGGGKDVFVHYTAIDVNGFKTLTVGQKVEFDIQ 74
>gi|348172319|ref|ZP_08879213.1| cold-shock DNA-binding domain-containing protein
[Saccharopolyspora spinosa NRRL 18395]
Length = 67
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
MAQ G V WF+ KG+GFI P+DGG D+FVH SI ++G+R+L ENQ+VE++V
Sbjct: 1 MAQ-----GTVKWFNAEKGFGFIAPNDGGPDVFVHYSSIDTNGFRSLDENQAVEYEV 52
>gi|107022084|ref|YP_620411.1| cold-shock DNA-binding domain-containing protein [Burkholderia
cenocepacia AU 1054]
gi|116689028|ref|YP_834651.1| cold-shock DNA-binding domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|170732317|ref|YP_001764264.1| cold-shock DNA-binding domain-containing protein [Burkholderia
cenocepacia MC0-3]
gi|206561351|ref|YP_002232116.1| cold shock-like protein [Burkholderia cenocepacia J2315]
gi|254246036|ref|ZP_04939357.1| Cold-shock protein, DNA-binding [Burkholderia cenocepacia PC184]
gi|421867267|ref|ZP_16298926.1| Cold shock protein CspG [Burkholderia cenocepacia H111]
gi|444361961|ref|ZP_21162534.1| cold-shock DNA-binding domain protein [Burkholderia cenocepacia
BC7]
gi|444373875|ref|ZP_21173188.1| cold-shock DNA-binding domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|105892273|gb|ABF75438.1| cold-shock DNA-binding protein family [Burkholderia cenocepacia
AU 1054]
gi|116647117|gb|ABK07758.1| cold-shock DNA-binding protein family [Burkholderia cenocepacia
HI2424]
gi|124870812|gb|EAY62528.1| Cold-shock protein, DNA-binding [Burkholderia cenocepacia PC184]
gi|169815559|gb|ACA90142.1| cold-shock DNA-binding domain protein [Burkholderia cenocepacia
MC0-3]
gi|198037393|emb|CAR53328.1| cold shock-like protein [Burkholderia cenocepacia J2315]
gi|358072681|emb|CCE49804.1| Cold shock protein CspG [Burkholderia cenocepacia H111]
gi|443591035|gb|ELT59967.1| cold-shock DNA-binding domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443597832|gb|ELT66241.1| cold-shock DNA-binding domain protein [Burkholderia cenocepacia
BC7]
Length = 67
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|383782515|ref|YP_005467082.1| putative cold-shock DNA-binding domain protein [Actinoplanes
missouriensis 431]
gi|386852558|ref|YP_006270571.1| Cold shock protein cspA [Actinoplanes sp. SE50/110]
gi|359840062|gb|AEV88503.1| Cold shock protein cspA [Actinoplanes sp. SE50/110]
gi|381375748|dbj|BAL92566.1| putative cold-shock DNA-binding domain protein [Actinoplanes
missouriensis 431]
Length = 67
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
TG V WF+ KG+GFI PDDGGAD+F H +I+ GYR+L ENQ VEF+V
Sbjct: 3 TGVVKWFNADKGFGFITPDDGGADVFAHFSAIQMSGYRSLEENQRVEFEV 52
>gi|302865133|ref|YP_003833770.1| cold-shock protein [Micromonospora aurantiaca ATCC 27029]
gi|315501633|ref|YP_004080520.1| cold-shock DNA-binding domain-containing protein [Micromonospora
sp. L5]
gi|302567992|gb|ADL44194.1| Cold-shock protein DNA-binding [Micromonospora aurantiaca ATCC
27029]
gi|315408252|gb|ADU06369.1| cold-shock DNA-binding domain protein [Micromonospora sp. L5]
Length = 67
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDGGAD+F H +I + G+R+L ENQ VEFD+
Sbjct: 2 TTGTVKWFNADKGFGFISPDDGGADVFAHFSAISASGFRSLDENQKVEFDI 52
>gi|52345636|ref|NP_001004865.1| zinc finger protein 9 [Xenopus (Silurana) tropicalis]
gi|49257796|gb|AAH74704.1| CCHC-type zinc finger, nucleic acid binding protein [Xenopus
(Silurana) tropicalis]
Length = 138
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-------------------CYNCGDPEHFAR 171
C+ C GH AREC + G CY CG+ H A+
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQEDA----------CYNCGRGGHIAKDC--KEPRKEREQCCYNCGKPGHLARDCDH 113
Query: 232 GGAGGGGSCFNCGKPGHFARECTKVAN 258
C++CG+ GH ARECT A
Sbjct: 114 ADEQ---KCYSCGEFGHLARECTIEAT 137
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 24/116 (20%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG------------------CFKCGGYG 197
+S C+ CG H+AR+CP G G C++CG G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 111
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 24/102 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNS 187
+CY C GH+A++C + CYNCG H A+DC PR++ YN
Sbjct: 53 ICYRCGESGHLAKDC---------DLQEDACYNCGRGGHIAKDCKEPRKEREQCCYN--- 100
Query: 188 GGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
CG GHLARDC +CY+CG+ GHLAR+C
Sbjct: 101 -----CGKPGHLARDC-----DHADEQKCYSCGEFGHLAREC 132
>gi|326472229|gb|EGD96238.1| zinc knuckle domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 182
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 25/116 (21%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGG 211
Y ++ GC+NCG+ H ARDCP++ + C+ CGG GH++R+C
Sbjct: 2 EYQSSGRGCFNCGESSHQARDCPKK---------GTPTCYNCGGQGHVSRECTQPPKEKS 52
Query: 212 GGGRCYNCGKSGHLARDCGAGGAG------------GGGSCFNCGKPGHFARECTK 255
CY CG +GH++R+C + G+G GG C+ CG+ GH AR C++
Sbjct: 53 ----CYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQ 104
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
G CYNC G GHV+RECT + + CY CG H +R+CP G N+Y+
Sbjct: 27 GTPTCYNCGGQGHVSRECTQPPKEKS-------CYRCGMTGHISRECPSSGSGDNNYSGG 79
Query: 187 SGG------CFKCGGYGHLARDCITRGSGGGGGG-------------------RCYNCGK 221
G C+KCG GH+AR+C +G G GGG CY+CG
Sbjct: 80 YSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGG 139
Query: 222 SGHLARDCGAGG---------AGGGGSCFNCGKPGHFAREC 253
GH+ARDCG G A G C+ C + GH C
Sbjct: 140 YGHMARDCGEVGHVSRDCPTEAKGERVCYKCKQAGHVQAAC 180
>gi|357590166|ref|ZP_09128832.1| cold shock-like protein A [Corynebacterium nuruki S6-4]
Length = 67
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KGYGFI P+DGGAD+FVH I+ +G+RTL ENQ VEF++ A G Q
Sbjct: 2 AQGTVKWFNAEKGYGFIAPNDGGADVFVHYSEIQGNGFRTLEENQQVEFEIGEGAKGP-Q 60
Query: 67 ALDVTA 72
A VTA
Sbjct: 61 AQQVTA 66
>gi|432335712|ref|ZP_19587277.1| cold shock protein [Rhodococcus wratislaviensis IFP 2016]
gi|430777380|gb|ELB92738.1| cold shock protein [Rhodococcus wratislaviensis IFP 2016]
Length = 67
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+G K +GFI PDDGGADLFV I+ GY++L ENQ VEF+V
Sbjct: 2 AQGTVKWFNGEKCFGFISPDDGGADLFVQFSEIQCSGYKSLQENQRVEFEV 52
>gi|429043478|ref|ZP_19108408.1| cold shock-like protein CspG [Escherichia coli 96.0107]
gi|427307611|gb|EKW70049.1| cold shock-like protein CspG [Escherichia coli 96.0107]
Length = 70
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56
>gi|347761874|ref|YP_004869435.1| cold shock transcriptional regulator [Gluconacetobacter xylinus
NBRC 3288]
gi|349686433|ref|ZP_08897575.1| cold shock protein [Gluconacetobacter oboediens 174Bp2]
gi|349699961|ref|ZP_08901590.1| cold shock protein [Gluconacetobacter europaeus LMG 18494]
gi|347580844|dbj|BAK85065.1| transcriptional regulator cold shock protein [Gluconacetobacter
xylinus NBRC 3288]
Length = 67
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TGKV WF+ KG+GFI PDDGG D+FVH ++++ G R L E+Q+V +D+ +E GK
Sbjct: 2 ATGKVKWFNATKGFGFIMPDDGGKDVFVHITAVQAAGLRGLNEDQAVSYDIAMER-GKAA 60
Query: 67 ALDVTA 72
A ++ A
Sbjct: 61 ATNLKA 66
>gi|297815424|ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 190 CFKCGGYGHLARDCITRG----------SGGGGGGRCYNCGKSGHLARDCG--------- 230
C+KCG GH ARDC + G CY CGK GH A+DC
Sbjct: 235 CYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHWAKDCTGQSGDPQFQ 294
Query: 231 ---AGGAGGGGSCFNCGKPGHFARECTKVAN 258
A GG C+ CGKPGH+AR+CT A
Sbjct: 295 SRQAKSTTSGGDCYKCGKPGHWARDCTSAAQ 325
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 160 CYNCGDPEHFARDC------PRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--------- 204
CY CG H+ARDC P + G +++SG C+KCG GH A+DC
Sbjct: 235 CYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHWAKDCTGQSGDPQFQ 294
Query: 205 -TRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
+ GG CY CGK GH ARDC +
Sbjct: 295 SRQAKSTTSGGDCYKCGKPGHWARDCTSAA 324
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 13/66 (19%)
Query: 202 DCITRG-SGGGGGGRCYNCGKSGHLARDCGA------------GGAGGGGSCFNCGKPGH 248
D TRG G CY CGK GH ARDC A + G C+ CGK GH
Sbjct: 220 DSDTRGYQTAKTGAPCYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGH 279
Query: 249 FARECT 254
+A++CT
Sbjct: 280 WAKDCT 285
>gi|15830399|ref|NP_309172.1| cold shock protein CspG [Escherichia coli O157:H7 str. Sakai]
gi|16128956|ref|NP_415510.1| cold shock protein homolog, cold-inducible [Escherichia coli str.
K-12 substr. MG1655]
gi|26247008|ref|NP_753048.1| cold shock protein CspG [Escherichia coli CFT073]
gi|74311547|ref|YP_309966.1| cold shock protein CspG [Shigella sonnei Ss046]
gi|82544687|ref|YP_408634.1| cold shock protein CspG [Shigella boydii Sb227]
gi|91210080|ref|YP_540066.1| cold shock protein CspG [Escherichia coli UTI89]
gi|110641171|ref|YP_668901.1| cold shock protein CspG [Escherichia coli 536]
gi|157157933|ref|YP_001462221.1| cold shock protein CspG [Escherichia coli E24377A]
gi|157160508|ref|YP_001457826.1| cold shock protein CspG [Escherichia coli HS]
gi|168747396|ref|ZP_02772418.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4113]
gi|168754310|ref|ZP_02779317.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4401]
gi|168763226|ref|ZP_02788233.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4501]
gi|168767487|ref|ZP_02792494.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|168773676|ref|ZP_02798683.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4196]
gi|168781006|ref|ZP_02806013.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4076]
gi|168787495|ref|ZP_02812502.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC869]
gi|168800619|ref|ZP_02825626.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC508]
gi|170020611|ref|YP_001725565.1| cold shock protein CspG [Escherichia coli ATCC 8739]
gi|170080648|ref|YP_001729968.1| cold shock protein CspG [Escherichia coli str. K-12 substr.
DH10B]
gi|170683191|ref|YP_001744186.1| cold shock protein CspG [Escherichia coli SMS-3-5]
gi|187730656|ref|YP_001880813.1| cold shock protein CspG [Shigella boydii CDC 3083-94]
gi|188493174|ref|ZP_03000444.1| cold shock DNA-binding protein [Escherichia coli 53638]
gi|191166565|ref|ZP_03028394.1| cold shock DNA-binding protein [Escherichia coli B7A]
gi|191172438|ref|ZP_03033979.1| cold shock DNA-binding protein [Escherichia coli F11]
gi|193066327|ref|ZP_03047377.1| cold shock DNA-binding protein [Escherichia coli E22]
gi|193070805|ref|ZP_03051739.1| cold shock DNA-binding protein [Escherichia coli E110019]
gi|194429832|ref|ZP_03062345.1| cold shock DNA-binding protein [Escherichia coli B171]
gi|194432411|ref|ZP_03064698.1| cold shock DNA-binding protein [Shigella dysenteriae 1012]
gi|194438072|ref|ZP_03070165.1| cold shock DNA-binding protein [Escherichia coli 101-1]
gi|195935247|ref|ZP_03080629.1| cold shock protein CspG [Escherichia coli O157:H7 str. EC4024]
gi|208806958|ref|ZP_03249295.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208814978|ref|ZP_03256157.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208822652|ref|ZP_03262971.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209398274|ref|YP_002269715.1| cold shock protein CspG [Escherichia coli O157:H7 str. EC4115]
gi|209918242|ref|YP_002292326.1| cold shock protein CspG [Escherichia coli SE11]
gi|215486106|ref|YP_002328537.1| cold shock protein CspG [Escherichia coli O127:H6 str. E2348/69]
gi|217324361|ref|ZP_03440445.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|218553577|ref|YP_002386490.1| cold shock protein CspG [Escherichia coli IAI1]
gi|218557881|ref|YP_002390794.1| cold shock protein CspG [Escherichia coli S88]
gi|218688878|ref|YP_002397090.1| cold shock protein CspG [Escherichia coli ED1a]
gi|218694525|ref|YP_002402192.1| cold shock protein CspG [Escherichia coli 55989]
gi|218700498|ref|YP_002408127.1| cold shock protein CspG [Escherichia coli IAI39]
gi|218704406|ref|YP_002411925.1| cold shock protein CspG [Escherichia coli UMN026]
gi|222155700|ref|YP_002555839.1| Cold shock-like protein cspG [Escherichia coli LF82]
gi|227884058|ref|ZP_04001863.1| CspA family cold shock transcriptional regulator [Escherichia
coli 83972]
gi|237707032|ref|ZP_04537513.1| cold shock protein CspG [Escherichia sp. 3_2_53FAA]
gi|238900249|ref|YP_002926045.1| cold shock protein CspG [Escherichia coli BW2952]
gi|251784530|ref|YP_002998834.1| cold shock protein CspG [Escherichia coli BL21(DE3)]
gi|253773981|ref|YP_003036812.1| cold shock protein CspG [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161102|ref|YP_003044210.1| cold shock protein CspG [Escherichia coli B str. REL606]
gi|254287910|ref|YP_003053658.1| DNA-binding transcriptional regulator [Escherichia coli
BL21(DE3)]
gi|254792247|ref|YP_003077084.1| cold shock protein CspG [Escherichia coli O157:H7 str. TW14359]
gi|260843237|ref|YP_003221015.1| DNA-binding transcriptional regulator CspG [Escherichia coli
O103:H2 str. 12009]
gi|260854693|ref|YP_003228584.1| cold shock protein CspG [Escherichia coli O26:H11 str. 11368]
gi|260867198|ref|YP_003233600.1| DNA-binding transcriptional regulator CspG [Escherichia coli
O111:H- str. 11128]
gi|261227159|ref|ZP_05941440.1| DNA-binding transcriptional regulator [Escherichia coli O157:H7
str. FRIK2000]
gi|261255727|ref|ZP_05948260.1| DNA-binding transcriptional regulator CspG [Escherichia coli
O157:H7 str. FRIK966]
gi|291281988|ref|YP_003498806.1| cold-shock protein [Escherichia coli O55:H7 str. CB9615]
gi|293404283|ref|ZP_06648277.1| cold shock-like protein cspG [Escherichia coli FVEC1412]
gi|293409367|ref|ZP_06652943.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414265|ref|ZP_06656914.1| cold shock protein [Escherichia coli B185]
gi|293433284|ref|ZP_06661712.1| cold shock-like protein CspC [Escherichia coli B088]
gi|297519754|ref|ZP_06938140.1| cold shock protein CspG [Escherichia coli OP50]
gi|298380066|ref|ZP_06989671.1| cold shock-like protein cspG [Escherichia coli FVEC1302]
gi|300819431|ref|ZP_07099628.1| transcriptional repressor activity CueR [Escherichia coli MS
107-1]
gi|300823951|ref|ZP_07104074.1| transcriptional repressor activity CueR [Escherichia coli MS
119-7]
gi|300896362|ref|ZP_07114904.1| transcriptional repressor activity CueR [Escherichia coli MS
198-1]
gi|300902844|ref|ZP_07120792.1| transcriptional repressor activity CueR [Escherichia coli MS
84-1]
gi|300920966|ref|ZP_07137356.1| transcriptional repressor activity CueR [Escherichia coli MS
115-1]
gi|300925325|ref|ZP_07141215.1| transcriptional repressor activity CueR [Escherichia coli MS
182-1]
gi|300929241|ref|ZP_07144720.1| transcriptional repressor activity CueR [Escherichia coli MS
187-1]
gi|300937663|ref|ZP_07152469.1| transcriptional repressor activity CueR [Escherichia coli MS
21-1]
gi|300949634|ref|ZP_07163620.1| transcriptional repressor activity CueR [Escherichia coli MS
116-1]
gi|300957866|ref|ZP_07170042.1| transcriptional repressor activity CueR [Escherichia coli MS
175-1]
gi|300978251|ref|ZP_07174199.1| transcriptional repressor activity CueR [Escherichia coli MS
45-1]
gi|300982793|ref|ZP_07176303.1| transcriptional repressor activity CueR [Escherichia coli MS
200-1]
gi|301022616|ref|ZP_07186487.1| transcriptional repressor activity CueR [Escherichia coli MS
196-1]
gi|301023111|ref|ZP_07186918.1| transcriptional repressor activity CueR [Escherichia coli MS
69-1]
gi|301047756|ref|ZP_07194812.1| transcriptional repressor activity CueR [Escherichia coli MS
185-1]
gi|301302393|ref|ZP_07208524.1| transcriptional repressor activity CueR [Escherichia coli MS
124-1]
gi|301327177|ref|ZP_07220443.1| transcriptional repressor activity CueR [Escherichia coli MS
78-1]
gi|301646375|ref|ZP_07246260.1| transcriptional repressor activity CueR [Escherichia coli MS
146-1]
gi|306812571|ref|ZP_07446764.1| cold shock protein CspG [Escherichia coli NC101]
gi|307311625|ref|ZP_07591265.1| cold-shock DNA-binding domain protein [Escherichia coli W]
gi|309795021|ref|ZP_07689441.1| transcriptional repressor activity CueR [Escherichia coli MS
145-7]
gi|312968952|ref|ZP_07783159.1| cold shock-like protein cspG [Escherichia coli 2362-75]
gi|331641521|ref|ZP_08342656.1| conserved domain protein [Escherichia coli H736]
gi|331646244|ref|ZP_08347347.1| conserved domain protein [Escherichia coli M605]
gi|331652014|ref|ZP_08353033.1| conserved domain protein [Escherichia coli M718]
gi|331657050|ref|ZP_08358012.1| conserved domain protein [Escherichia coli TA206]
gi|331662397|ref|ZP_08363320.1| conserved domain protein [Escherichia coli TA143]
gi|331667381|ref|ZP_08368245.1| conserved domain protein [Escherichia coli TA271]
gi|331672524|ref|ZP_08373313.1| conserved domain protein [Escherichia coli TA280]
gi|331676780|ref|ZP_08377476.1| conserved domain protein [Escherichia coli H591]
gi|331682495|ref|ZP_08383114.1| conserved domain protein [Escherichia coli H299]
gi|332279828|ref|ZP_08392241.1| cold shock protein CspG [Shigella sp. D9]
gi|378713605|ref|YP_005278498.1| cold-shock protein [Escherichia coli KO11FL]
gi|383177641|ref|YP_005455646.1| cold shock protein CspG [Shigella sonnei 53G]
gi|386280104|ref|ZP_10057774.1| cold shock-like protein CspG [Escherichia sp. 4_1_40B]
gi|386596176|ref|YP_006092576.1| cold-shock protein [Escherichia coli DH1]
gi|386598753|ref|YP_006100259.1| cold shock DNA-binding protein [Escherichia coli IHE3034]
gi|386605114|ref|YP_006111414.1| cold shock protein CspG [Escherichia coli UM146]
gi|386608357|ref|YP_006123843.1| DNA-binding transcriptional regulator [Escherichia coli W]
gi|386613263|ref|YP_006132929.1| cold shock-like protein CspG [Escherichia coli UMNK88]
gi|386618579|ref|YP_006138159.1| Cold shock protein [Escherichia coli NA114]
gi|386623387|ref|YP_006143115.1| putative cold shock protein, cold-inducible [Escherichia coli
O7:K1 str. CE10]
gi|386628516|ref|YP_006148236.1| cold shock protein CspG [Escherichia coli str. 'clone D i2']
gi|386633436|ref|YP_006153155.1| cold shock protein CspG [Escherichia coli str. 'clone D i14']
gi|386638322|ref|YP_006105120.1| cold shock-like protein CspG [Escherichia coli ABU 83972]
gi|386702038|ref|YP_006165875.1| cold shock protein CspG [Escherichia coli KO11FL]
gi|386704169|ref|YP_006168016.1| Cold shock-like protein cspG [Escherichia coli P12b]
gi|386708801|ref|YP_006172522.1| cold shock protein CspG [Escherichia coli W]
gi|387506100|ref|YP_006158356.1| cold shock protein CspG [Escherichia coli O55:H7 str. RM12579]
gi|387606525|ref|YP_006095381.1| cold shock-like protein [Escherichia coli 042]
gi|387611531|ref|YP_006114647.1| cold shock-like protein [Escherichia coli ETEC H10407]
gi|387616234|ref|YP_006119256.1| cold shock protein CspG [Escherichia coli O83:H1 str. NRG 857C]
gi|387620717|ref|YP_006128344.1| cold shock-like protein cspG [Escherichia coli DH1]
gi|387828949|ref|YP_003348886.1| cold shock-like protein [Escherichia coli SE15]
gi|387881664|ref|YP_006311966.1| cold shock protein CspG [Escherichia coli Xuzhou21]
gi|388477074|ref|YP_489262.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
substr. W3110]
gi|407468465|ref|YP_006785093.1| cold shock protein CspG [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407482805|ref|YP_006779954.1| cold shock protein CspG [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483357|ref|YP_006770903.1| cold shock protein CspG [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415781539|ref|ZP_11491121.1| cold shock-like protein cspG [Escherichia coli EPECa14]
gi|415807785|ref|ZP_11501716.1| cold shock-like protein cspG [Escherichia coli E128010]
gi|415809422|ref|ZP_11502192.1| cold shock-like protein cspG [Escherichia coli LT-68]
gi|415824499|ref|ZP_11512788.1| cold shock-like protein cspG [Escherichia coli OK1180]
gi|415827485|ref|ZP_11514326.1| cold shock-like protein cspG [Escherichia coli OK1357]
gi|415850506|ref|ZP_11527381.1| cold shock-like protein cspG [Shigella sonnei 53G]
gi|415861007|ref|ZP_11534722.1| transcriptional repressor activity CueR [Escherichia coli MS
85-1]
gi|415878569|ref|ZP_11544313.1| putative cold shock protein [Escherichia coli MS 79-10]
gi|416268302|ref|ZP_11642104.1| Cold shock protein CspG [Shigella dysenteriae CDC 74-1112]
gi|416286908|ref|ZP_11648693.1| Cold shock protein CspG [Shigella boydii ATCC 9905]
gi|416292582|ref|ZP_11650259.1| Cold shock protein CspG [Shigella flexneri CDC 796-83]
gi|416307794|ref|ZP_11654746.1| Cold shock protein CspG [Escherichia coli O157:H7 str. 1044]
gi|416317705|ref|ZP_11660585.1| Cold shock protein CspG [Escherichia coli O157:H7 str. EC1212]
gi|416331914|ref|ZP_11670072.1| Cold shock protein CspG [Escherichia coli O157:H7 str. 1125]
gi|416334985|ref|ZP_11671696.1| Cold shock protein CspG [Escherichia coli WV_060327]
gi|416343596|ref|ZP_11677528.1| Cold shock protein CspG [Escherichia coli EC4100B]
gi|416782096|ref|ZP_11877565.1| cold shock protein CspG [Escherichia coli O157:H7 str. G5101]
gi|416793328|ref|ZP_11882489.1| cold shock protein CspG [Escherichia coli O157:H- str. 493-89]
gi|416804594|ref|ZP_11887349.1| cold shock protein CspG [Escherichia coli O157:H- str. H 2687]
gi|416815718|ref|ZP_11892056.1| cold shock protein CspG [Escherichia coli O55:H7 str. 3256-97]
gi|416825490|ref|ZP_11896641.1| cold shock protein CspG [Escherichia coli O55:H7 str. USDA 5905]
gi|416836296|ref|ZP_11901911.1| cold shock protein CspG [Escherichia coli O157:H7 str. LSU-61]
gi|416897113|ref|ZP_11926883.1| cold shock-like protein cspG [Escherichia coli STEC_7v]
gi|417083526|ref|ZP_11951571.1| cold shock protein CspG [Escherichia coli cloneA_i1]
gi|417113097|ref|ZP_11965017.1| transcriptional repressor activity CueR [Escherichia coli 1.2741]
gi|417125456|ref|ZP_11973514.1| transcriptional repressor activity CueR [Escherichia coli
97.0246]
gi|417130716|ref|ZP_11975987.1| transcriptional repressor activity CueR [Escherichia coli 5.0588]
gi|417137425|ref|ZP_11981215.1| transcriptional repressor activity CueR [Escherichia coli
97.0259]
gi|417150217|ref|ZP_11990107.1| transcriptional repressor activity CueR [Escherichia coli 1.2264]
gi|417154963|ref|ZP_11993092.1| transcriptional repressor activity CueR [Escherichia coli
96.0497]
gi|417161621|ref|ZP_11997857.1| transcriptional repressor activity CueR [Escherichia coli
99.0741]
gi|417173201|ref|ZP_12003102.1| transcriptional repressor activity CueR [Escherichia coli 3.2608]
gi|417180477|ref|ZP_12008185.1| transcriptional repressor activity CueR [Escherichia coli
93.0624]
gi|417193090|ref|ZP_12014937.1| transcriptional repressor activity CueR [Escherichia coli 4.0522]
gi|417207372|ref|ZP_12019757.1| transcriptional repressor activity CueR [Escherichia coli JB1-95]
gi|417224460|ref|ZP_12027751.1| transcriptional repressor activity CueR [Escherichia coli 96.154]
gi|417227362|ref|ZP_12029305.1| transcriptional repressor activity CueR [Escherichia coli 5.0959]
gi|417242209|ref|ZP_12037671.1| transcriptional repressor activity CueR [Escherichia coli 9.0111]
gi|417250592|ref|ZP_12042368.1| transcriptional repressor activity CueR [Escherichia coli 4.0967]
gi|417255086|ref|ZP_12046802.1| transcriptional repressor activity CueR [Escherichia coli 2.3916]
gi|417266436|ref|ZP_12053804.1| transcriptional repressor activity CueR [Escherichia coli 3.3884]
gi|417274391|ref|ZP_12061731.1| transcriptional repressor activity CueR [Escherichia coli 2.4168]
gi|417278446|ref|ZP_12065761.1| transcriptional repressor activity CueR [Escherichia coli 3.2303]
gi|417283757|ref|ZP_12071054.1| transcriptional repressor activity CueR [Escherichia coli 3003]
gi|417288450|ref|ZP_12075735.1| transcriptional repressor activity CueR [Escherichia coli
TW07793]
gi|417289424|ref|ZP_12076707.1| transcriptional repressor activity CueR [Escherichia coli B41]
gi|417294915|ref|ZP_12082174.1| transcriptional repressor activity CueR [Escherichia coli 900105
(10e)]
gi|417307454|ref|ZP_12094321.1| CspB [Escherichia coli PCN033]
gi|417580266|ref|ZP_12231082.1| cold shock-like protein cspG [Escherichia coli STEC_B2F1]
gi|417585918|ref|ZP_12236691.1| cold shock-like protein cspG [Escherichia coli STEC_C165-02]
gi|417590765|ref|ZP_12241479.1| cold shock-like protein cspG [Escherichia coli 2534-86]
gi|417596049|ref|ZP_12246707.1| cold shock-like protein cspG [Escherichia coli 3030-1]
gi|417601402|ref|ZP_12251980.1| cold shock-like protein cspG [Escherichia coli STEC_94C]
gi|417607272|ref|ZP_12257789.1| cold shock-like protein cspG [Escherichia coli STEC_DG131-3]
gi|417612131|ref|ZP_12262602.1| cold shock-like protein cspG [Escherichia coli STEC_EH250]
gi|417617453|ref|ZP_12267883.1| cold shock-like protein cspG [Escherichia coli G58-1]
gi|417622514|ref|ZP_12272831.1| cold shock-like protein cspG [Escherichia coli STEC_H.1.8]
gi|417627924|ref|ZP_12278171.1| cold shock-like protein cspG [Escherichia coli STEC_MHI813]
gi|417633625|ref|ZP_12283844.1| cold shock-like protein cspG [Escherichia coli STEC_S1191]
gi|417638329|ref|ZP_12288494.1| cold shock-like protein cspG [Escherichia coli TX1999]
gi|417661538|ref|ZP_12311119.1| cold shock protein CspG [Escherichia coli AA86]
gi|417666199|ref|ZP_12315757.1| cold shock-like protein cspG [Escherichia coli STEC_O31]
gi|417671674|ref|ZP_12321162.1| cold shock-like protein cspG [Shigella dysenteriae 155-74]
gi|417682659|ref|ZP_12332012.1| cold shock-like protein cspG [Shigella boydii 3594-74]
gi|417688964|ref|ZP_12338201.1| cold shock-like protein cspG [Shigella boydii 5216-82]
gi|417754885|ref|ZP_12402976.1| cold shock protein CspG [Escherichia coli DEC2B]
gi|417804443|ref|ZP_12451447.1| cold shock protein CspG [Escherichia coli O104:H4 str. LB226692]
gi|417832185|ref|ZP_12478675.1| cold shock protein CspG [Escherichia coli O104:H4 str. 01-09591]
gi|417865230|ref|ZP_12510275.1| hypothetical protein C22711_2162 [Escherichia coli O104:H4 str.
C227-11]
gi|417946611|ref|ZP_12589825.1| cold shock protein CspG [Escherichia coli XH140A]
gi|417978262|ref|ZP_12619033.1| cold shock protein CspG [Escherichia coli XH001]
gi|418043183|ref|ZP_12681355.1| cold shock protein CspG [Escherichia coli W26]
gi|418263515|ref|ZP_12884484.1| cold shock protein CspG [Shigella sonnei str. Moseley]
gi|418302010|ref|ZP_12913804.1| cold shock-like protein cspG (CPS-G) [Escherichia coli UMNF18]
gi|418945471|ref|ZP_13498298.1| cold shock protein CspG [Escherichia coli O157:H43 str. T22]
gi|418958669|ref|ZP_13510579.1| cold shock protein CspG [Escherichia coli J53]
gi|418995989|ref|ZP_13543596.1| cold shock protein CspG [Escherichia coli DEC1A]
gi|419001254|ref|ZP_13548804.1| cold shock protein CspG [Escherichia coli DEC1B]
gi|419006739|ref|ZP_13554192.1| cold shock protein CspG [Escherichia coli DEC1C]
gi|419012584|ref|ZP_13559947.1| cold shock-like protein CspG [Escherichia coli DEC1D]
gi|419017584|ref|ZP_13564903.1| cold shock protein CspG [Escherichia coli DEC1E]
gi|419023179|ref|ZP_13570419.1| cold shock-like protein CspG [Escherichia coli DEC2A]
gi|419028045|ref|ZP_13575237.1| cold shock protein CspG [Escherichia coli DEC2C]
gi|419033841|ref|ZP_13580937.1| cold shock protein CspG [Escherichia coli DEC2D]
gi|419038851|ref|ZP_13585904.1| cold shock protein CspG [Escherichia coli DEC2E]
gi|419044255|ref|ZP_13591223.1| cold shock protein CspG [Escherichia coli DEC3A]
gi|419049835|ref|ZP_13596747.1| cold shock protein CspG [Escherichia coli DEC3B]
gi|419055929|ref|ZP_13602777.1| cold shock protein CspG [Escherichia coli DEC3C]
gi|419061488|ref|ZP_13608258.1| cold shock protein CspG [Escherichia coli DEC3D]
gi|419068233|ref|ZP_13614104.1| cold shock protein CspG [Escherichia coli DEC3E]
gi|419074320|ref|ZP_13619884.1| cold shock protein CspG [Escherichia coli DEC3F]
gi|419079488|ref|ZP_13624966.1| cold shock protein CspG [Escherichia coli DEC4A]
gi|419085195|ref|ZP_13630594.1| cold shock protein CspG [Escherichia coli DEC4B]
gi|419091276|ref|ZP_13636590.1| cold shock protein CspG [Escherichia coli DEC4C]
gi|419097219|ref|ZP_13642454.1| cold shock protein CspG [Escherichia coli DEC4D]
gi|419102890|ref|ZP_13648051.1| cold shock protein CspG [Escherichia coli DEC4E]
gi|419108386|ref|ZP_13653486.1| cold shock protein CspG [Escherichia coli DEC4F]
gi|419113915|ref|ZP_13658945.1| cold shock protein CspG [Escherichia coli DEC5A]
gi|419119553|ref|ZP_13664531.1| cold shock protein CspG [Escherichia coli DEC5B]
gi|419125307|ref|ZP_13670203.1| cold shock protein CspG [Escherichia coli DEC5C]
gi|419130799|ref|ZP_13675646.1| cold shock protein CspG [Escherichia coli DEC5D]
gi|419135530|ref|ZP_13680336.1| cold shock-like protein CspG [Escherichia coli DEC5E]
gi|419141519|ref|ZP_13686273.1| cold shock-like protein CspG [Escherichia coli DEC6A]
gi|419147171|ref|ZP_13691861.1| cold shock protein CspG [Escherichia coli DEC6B]
gi|419152922|ref|ZP_13697505.1| cold shock-like protein CspG [Escherichia coli DEC6C]
gi|419158336|ref|ZP_13702852.1| cold shock-like protein CspG [Escherichia coli DEC6D]
gi|419163303|ref|ZP_13707778.1| cold shock protein CspG [Escherichia coli DEC6E]
gi|419168980|ref|ZP_13713374.1| cold shock-like protein CspG [Escherichia coli DEC7A]
gi|419174629|ref|ZP_13718480.1| cold shock protein CspG [Escherichia coli DEC7B]
gi|419179961|ref|ZP_13723584.1| cold shock protein CspG [Escherichia coli DEC7C]
gi|419185522|ref|ZP_13729044.1| cold shock protein CspG [Escherichia coli DEC7D]
gi|419190788|ref|ZP_13734254.1| cold shock-like protein CspG [Escherichia coli DEC7E]
gi|419196123|ref|ZP_13739526.1| cold shock-like protein CspG [Escherichia coli DEC8A]
gi|419202215|ref|ZP_13745435.1| cold shock protein CspG [Escherichia coli DEC8B]
gi|419208216|ref|ZP_13751334.1| cold shock protein CspG [Escherichia coli DEC8C]
gi|419214767|ref|ZP_13757787.1| cold shock protein CspG [Escherichia coli DEC8D]
gi|419220363|ref|ZP_13763311.1| cold shock protein CspG [Escherichia coli DEC8E]
gi|419225867|ref|ZP_13768745.1| cold shock protein CspG [Escherichia coli DEC9A]
gi|419231619|ref|ZP_13774407.1| cold shock protein CspG [Escherichia coli DEC9B]
gi|419236968|ref|ZP_13779711.1| cold shock protein CspG [Escherichia coli DEC9C]
gi|419242502|ref|ZP_13785149.1| cold shock protein CspG [Escherichia coli DEC9D]
gi|419248024|ref|ZP_13790631.1| cold shock protein CspG [Escherichia coli DEC9E]
gi|419254174|ref|ZP_13796703.1| cold shock protein CspG [Escherichia coli DEC10A]
gi|419260262|ref|ZP_13802699.1| cold shock protein CspG [Escherichia coli DEC10B]
gi|419266229|ref|ZP_13808600.1| cold shock protein CspG [Escherichia coli DEC10C]
gi|419271703|ref|ZP_13814018.1| cold shock protein CspG [Escherichia coli DEC10D]
gi|419277269|ref|ZP_13819530.1| cold shock protein CspG [Escherichia coli DEC10E]
gi|419283363|ref|ZP_13825562.1| cold shock protein CspG [Escherichia coli DEC10F]
gi|419288575|ref|ZP_13830684.1| cold shock protein CspG [Escherichia coli DEC11A]
gi|419293884|ref|ZP_13835939.1| cold shock protein CspG [Escherichia coli DEC11B]
gi|419299312|ref|ZP_13841324.1| cold shock-like protein CspG [Escherichia coli DEC11C]
gi|419305586|ref|ZP_13847496.1| cold shock-like protein CspG [Escherichia coli DEC11D]
gi|419310624|ref|ZP_13852495.1| cold shock-like protein CspG [Escherichia coli DEC11E]
gi|419315930|ref|ZP_13857752.1| cold shock-like protein CspG [Escherichia coli DEC12A]
gi|419321947|ref|ZP_13863674.1| cold shock protein CspG [Escherichia coli DEC12B]
gi|419328024|ref|ZP_13869651.1| cold shock-like protein CspG [Escherichia coli DEC12C]
gi|419338880|ref|ZP_13880364.1| cold shock protein CspG [Escherichia coli DEC12E]
gi|419344619|ref|ZP_13886001.1| cold shock protein CspG [Escherichia coli DEC13A]
gi|419349055|ref|ZP_13890408.1| cold shock protein CspG [Escherichia coli DEC13B]
gi|419354155|ref|ZP_13895431.1| cold shock protein CspG [Escherichia coli DEC13C]
gi|419359443|ref|ZP_13900668.1| cold shock protein CspG [Escherichia coli DEC13D]
gi|419364688|ref|ZP_13905860.1| cold shock protein CspG [Escherichia coli DEC13E]
gi|419369309|ref|ZP_13910435.1| cold shock-like protein CspG [Escherichia coli DEC14A]
gi|419374758|ref|ZP_13915804.1| cold shock protein CspG [Escherichia coli DEC14B]
gi|419380052|ref|ZP_13921019.1| cold shock protein CspG [Escherichia coli DEC14C]
gi|419385400|ref|ZP_13926288.1| cold shock protein CspG [Escherichia coli DEC14D]
gi|419390844|ref|ZP_13931668.1| cold shock protein CspG [Escherichia coli DEC15A]
gi|419395665|ref|ZP_13936446.1| cold shock protein CspG [Escherichia coli DEC15B]
gi|419401019|ref|ZP_13941749.1| cold shock protein CspG [Escherichia coli DEC15C]
gi|419406515|ref|ZP_13947209.1| cold shock protein CspG [Escherichia coli DEC15D]
gi|419411678|ref|ZP_13952345.1| cold shock protein CspG [Escherichia coli DEC15E]
gi|419699832|ref|ZP_14227444.1| cold shock protein CspG [Escherichia coli SCI-07]
gi|419803634|ref|ZP_14328803.1| cold shock protein CspG [Escherichia coli AI27]
gi|419809358|ref|ZP_14334243.1| cold shock protein CspG [Escherichia coli O32:H37 str. P4]
gi|419864805|ref|ZP_14387211.1| cold shock protein CspG [Escherichia coli O103:H25 str. CVM9340]
gi|419871766|ref|ZP_14393815.1| cold shock protein CspG [Escherichia coli O103:H2 str. CVM9450]
gi|419873567|ref|ZP_14395550.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9534]
gi|419885651|ref|ZP_14406350.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9545]
gi|419889896|ref|ZP_14410226.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9570]
gi|419897351|ref|ZP_14416941.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9574]
gi|419904235|ref|ZP_14423238.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM9942]
gi|419910739|ref|ZP_14429252.1| hypothetical protein ECO10026_28212 [Escherichia coli O26:H11
str. CVM10026]
gi|419911840|ref|ZP_14430307.1| cold shock protein CspG [Escherichia coli KD1]
gi|419918116|ref|ZP_14436330.1| cold shock protein CspG [Escherichia coli KD2]
gi|419925596|ref|ZP_14443429.1| cold shock protein CspG [Escherichia coli 541-15]
gi|419928536|ref|ZP_14446245.1| cold shock protein CspG [Escherichia coli 541-1]
gi|419936066|ref|ZP_14453099.1| cold shock protein CspG [Escherichia coli 576-1]
gi|419940829|ref|ZP_14457548.1| cold shock protein CspG [Escherichia coli 75]
gi|419945046|ref|ZP_14461504.1| cold shock protein CspG [Escherichia coli HM605]
gi|419951945|ref|ZP_14468124.1| cold shock protein CspG [Escherichia coli CUMT8]
gi|420090073|ref|ZP_14601849.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9602]
gi|420096192|ref|ZP_14607616.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9634]
gi|420105428|ref|ZP_14615931.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9455]
gi|420111903|ref|ZP_14621719.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9553]
gi|420117855|ref|ZP_14627203.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM10021]
gi|420123410|ref|ZP_14632301.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM10030]
gi|420128591|ref|ZP_14637144.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM10224]
gi|420134407|ref|ZP_14642515.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM9952]
gi|420268388|ref|ZP_14770786.1| putative cold-shock protein [Escherichia coli PA22]
gi|420274171|ref|ZP_14776496.1| putative cold-shock protein [Escherichia coli PA40]
gi|420279657|ref|ZP_14781919.1| putative cold-shock protein [Escherichia coli TW06591]
gi|420285538|ref|ZP_14787751.1| putative cold-shock protein [Escherichia coli TW10246]
gi|420291281|ref|ZP_14793440.1| putative cold-shock protein [Escherichia coli TW11039]
gi|420297085|ref|ZP_14799173.1| putative cold-shock protein [Escherichia coli TW09109]
gi|420303067|ref|ZP_14805089.1| putative cold-shock protein [Escherichia coli TW10119]
gi|420308585|ref|ZP_14810551.1| putative cold-shock protein [Escherichia coli EC1738]
gi|420314252|ref|ZP_14816153.1| putative cold-shock protein [Escherichia coli EC1734]
gi|420326338|ref|ZP_14828090.1| cold shock-like protein CspG [Shigella flexneri CCH060]
gi|420347561|ref|ZP_14848957.1| cold shock-like protein CspG [Shigella boydii 965-58]
gi|420353191|ref|ZP_14854310.1| cold shock-like protein CspG [Shigella boydii 4444-74]
gi|420357777|ref|ZP_14858782.1| cold shock-like protein CspG [Shigella sonnei 3226-85]
gi|420362376|ref|ZP_14863294.1| cold shock protein CspG [Shigella sonnei 4822-66]
gi|420380920|ref|ZP_14880375.1| cold shock-like protein CspG [Shigella dysenteriae 225-75]
gi|420384628|ref|ZP_14884010.1| cold shock-like protein CspG [Escherichia coli EPECa12]
gi|420390468|ref|ZP_14889735.1| cold shock protein CspG [Escherichia coli EPEC C342-62]
gi|421681693|ref|ZP_16121516.1| cold shock protein CspG [Shigella flexneri 1485-80]
gi|421775930|ref|ZP_16212537.1| cold shock protein CspG [Escherichia coli AD30]
gi|421811229|ref|ZP_16247020.1| putative cold-shock protein [Escherichia coli 8.0416]
gi|421817399|ref|ZP_16252949.1| cold shock-like protein CspG [Escherichia coli 10.0821]
gi|421822946|ref|ZP_16258374.1| putative cold-shock protein [Escherichia coli FRIK920]
gi|421829574|ref|ZP_16264897.1| putative cold-shock protein [Escherichia coli PA7]
gi|422332200|ref|ZP_16413214.1| cold shock-like protein CspG [Escherichia coli 4_1_47FAA]
gi|422352867|ref|ZP_16433635.1| transcriptional repressor activity CueR [Escherichia coli MS
117-3]
gi|422358589|ref|ZP_16439240.1| transcriptional repressor activity CueR [Escherichia coli MS
110-3]
gi|422366155|ref|ZP_16446630.1| transcriptional repressor activity CueR [Escherichia coli MS
153-1]
gi|422371955|ref|ZP_16452323.1| transcriptional repressor activity CueR [Escherichia coli MS
16-3]
gi|422375302|ref|ZP_16455568.1| transcriptional repressor activity CueR [Escherichia coli MS
60-1]
gi|422378830|ref|ZP_16459033.1| transcriptional repressor activity CueR [Escherichia coli MS
57-2]
gi|422747972|ref|ZP_16801885.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H252]
gi|422753599|ref|ZP_16807426.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H263]
gi|422762940|ref|ZP_16816696.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli E1167]
gi|422765561|ref|ZP_16819288.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli E1520]
gi|422770221|ref|ZP_16823912.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli E482]
gi|422775188|ref|ZP_16828844.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H120]
gi|422782180|ref|ZP_16834965.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli TW10509]
gi|422785582|ref|ZP_16838321.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H489]
gi|422790311|ref|ZP_16843016.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli TA007]
gi|422800354|ref|ZP_16848852.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli M863]
gi|422820016|ref|ZP_16868226.1| cold shock-like protein CspG [Escherichia coli M919]
gi|422828745|ref|ZP_16876915.1| cold shock-like protein cspG [Escherichia coli B093]
gi|422833189|ref|ZP_16881256.1| cold shock-like protein cspG [Escherichia coli E101]
gi|422839455|ref|ZP_16887427.1| cold shock-like protein cspG [Escherichia coli H397]
gi|422958837|ref|ZP_16970768.1| cold shock-like protein CspG [Escherichia coli H494]
gi|422970887|ref|ZP_16974399.1| cold shock-like protein CspG [Escherichia coli TA124]
gi|422991724|ref|ZP_16982495.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
C227-11]
gi|422993666|ref|ZP_16984430.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
C236-11]
gi|422998934|ref|ZP_16989690.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
09-7901]
gi|423007392|ref|ZP_16998135.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
04-8351]
gi|423008984|ref|ZP_16999722.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-3677]
gi|423023172|ref|ZP_17013875.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4404]
gi|423028324|ref|ZP_17019017.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4522]
gi|423034158|ref|ZP_17024842.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4623]
gi|423037024|ref|ZP_17027698.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423042143|ref|ZP_17032810.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423048833|ref|ZP_17039490.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423052415|ref|ZP_17041223.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423059381|ref|ZP_17048177.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423672337|ref|ZP_17647304.1| putative cold-shock protein [Escherichia coli PA31]
gi|423701835|ref|ZP_17676294.1| cold shock-like protein CspG [Escherichia coli H730]
gi|423708961|ref|ZP_17683339.1| cold shock-like protein CspG [Escherichia coli B799]
gi|424076102|ref|ZP_17813379.1| putative cold-shock protein [Escherichia coli FDA505]
gi|424082465|ref|ZP_17819257.1| putative cold-shock protein [Escherichia coli FDA517]
gi|424089096|ref|ZP_17825292.1| putative cold-shock protein [Escherichia coli FRIK1996]
gi|424101743|ref|ZP_17836828.1| putative cold-shock protein [Escherichia coli FRIK1990]
gi|424120544|ref|ZP_17854178.1| putative cold-shock protein [Escherichia coli PA5]
gi|424132877|ref|ZP_17865617.1| putative cold-shock protein [Escherichia coli PA10]
gi|424145873|ref|ZP_17877573.1| putative cold-shock protein [Escherichia coli PA15]
gi|424152015|ref|ZP_17883198.1| putative cold-shock protein [Escherichia coli PA24]
gi|424202169|ref|ZP_17888639.1| putative cold-shock protein [Escherichia coli PA25]
gi|424282054|ref|ZP_17894536.1| putative cold-shock protein [Escherichia coli PA28]
gi|424429486|ref|ZP_17900269.1| putative cold-shock protein [Escherichia coli PA32]
gi|424460752|ref|ZP_17911597.1| putative cold-shock protein [Escherichia coli PA39]
gi|424467215|ref|ZP_17917340.1| putative cold-shock protein [Escherichia coli PA41]
gi|424473760|ref|ZP_17923365.1| putative cold-shock protein [Escherichia coli PA42]
gi|424479694|ref|ZP_17928874.1| putative cold-shock protein [Escherichia coli TW07945]
gi|424485761|ref|ZP_17934559.1| putative cold-shock protein [Escherichia coli TW09098]
gi|424491972|ref|ZP_17940238.1| putative cold-shock protein [Escherichia coli TW09195]
gi|424498989|ref|ZP_17946193.1| putative cold-shock protein [Escherichia coli EC4203]
gi|424505126|ref|ZP_17951842.1| putative cold-shock protein [Escherichia coli EC4196]
gi|424511482|ref|ZP_17957627.1| putative cold-shock protein [Escherichia coli TW14313]
gi|424524848|ref|ZP_17968811.1| putative cold-shock protein [Escherichia coli EC4421]
gi|424542977|ref|ZP_17985713.1| putative cold-shock protein [Escherichia coli EC4402]
gi|424549289|ref|ZP_17991417.1| putative cold-shock protein [Escherichia coli EC4439]
gi|424555527|ref|ZP_17997181.1| putative cold-shock protein [Escherichia coli EC4436]
gi|424561882|ref|ZP_18003105.1| putative cold-shock protein [Escherichia coli EC4437]
gi|424580037|ref|ZP_18019912.1| putative cold-shock protein [Escherichia coli EC1863]
gi|424752302|ref|ZP_18180304.1| cold shock protein CspG [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424762059|ref|ZP_18189586.1| cold shock protein CspG [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424769822|ref|ZP_18197044.1| cold shock protein CspG [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425096696|ref|ZP_18499671.1| cold shock-like protein CspG [Escherichia coli 3.4870]
gi|425102874|ref|ZP_18505456.1| cold shock-like protein CspG [Escherichia coli 5.2239]
gi|425108663|ref|ZP_18510852.1| putative cold-shock protein [Escherichia coli 6.0172]
gi|425114351|ref|ZP_18516172.1| putative cold-shock protein [Escherichia coli 8.0566]
gi|425119060|ref|ZP_18520781.1| cold shock-like protein CspG [Escherichia coli 8.0569]
gi|425124450|ref|ZP_18525950.1| cold shock-like protein CspG [Escherichia coli 8.0586]
gi|425130519|ref|ZP_18531560.1| cold shock-like protein CspG [Escherichia coli 8.2524]
gi|425136881|ref|ZP_18537545.1| putative cold-shock protein [Escherichia coli 10.0833]
gi|425142728|ref|ZP_18542967.1| cold shock-like protein CspG [Escherichia coli 10.0869]
gi|425154695|ref|ZP_18554181.1| putative cold-shock protein [Escherichia coli PA34]
gi|425166664|ref|ZP_18565413.1| putative cold-shock protein [Escherichia coli FDA507]
gi|425172952|ref|ZP_18571288.1| putative cold-shock protein [Escherichia coli FDA504]
gi|425178842|ref|ZP_18576833.1| putative cold-shock protein [Escherichia coli FRIK1999]
gi|425185017|ref|ZP_18582575.1| putative cold-shock protein [Escherichia coli FRIK1997]
gi|425198126|ref|ZP_18594705.1| putative cold-shock protein [Escherichia coli NE037]
gi|425204774|ref|ZP_18600841.1| putative cold-shock protein [Escherichia coli FRIK2001]
gi|425210470|ref|ZP_18606144.1| putative cold-shock protein [Escherichia coli PA4]
gi|425216530|ref|ZP_18611778.1| putative cold-shock protein [Escherichia coli PA23]
gi|425223124|ref|ZP_18617903.1| putative cold-shock protein [Escherichia coli PA49]
gi|425229328|ref|ZP_18623660.1| putative cold-shock protein [Escherichia coli PA45]
gi|425235636|ref|ZP_18629539.1| putative cold-shock protein [Escherichia coli TT12B]
gi|425241655|ref|ZP_18635226.1| putative cold-shock protein [Escherichia coli MA6]
gi|425247780|ref|ZP_18640913.1| putative cold-shock protein [Escherichia coli 5905]
gi|425253512|ref|ZP_18646319.1| putative cold-shock protein [Escherichia coli CB7326]
gi|425259744|ref|ZP_18652062.1| putative cold-shock protein [Escherichia coli EC96038]
gi|425265959|ref|ZP_18657816.1| putative cold-shock protein [Escherichia coli 5412]
gi|425271848|ref|ZP_18663335.1| putative cold-shock protein [Escherichia coli TW15901]
gi|425282439|ref|ZP_18673536.1| putative cold-shock protein [Escherichia coli TW00353]
gi|425287524|ref|ZP_18678447.1| putative cold-shock protein [Escherichia coli 3006]
gi|425293383|ref|ZP_18683885.1| putative cold-shock protein [Escherichia coli PA38]
gi|425299410|ref|ZP_18689426.1| putative cold-shock protein [Escherichia coli 07798]
gi|425304526|ref|ZP_18694288.1| putative cold-shock protein [Escherichia coli N1]
gi|425328275|ref|ZP_18716425.1| putative cold-shock protein [Escherichia coli EC1846]
gi|425334454|ref|ZP_18722102.1| putative cold-shock protein [Escherichia coli EC1847]
gi|425352972|ref|ZP_18739281.1| putative cold-shock protein [Escherichia coli EC1850]
gi|425358972|ref|ZP_18744868.1| putative cold-shock protein [Escherichia coli EC1856]
gi|425365073|ref|ZP_18750546.1| putative cold-shock protein [Escherichia coli EC1862]
gi|425371520|ref|ZP_18756414.1| putative cold-shock protein [Escherichia coli EC1864]
gi|425378034|ref|ZP_18762348.1| putative cold-shock protein [Escherichia coli EC1865]
gi|425384326|ref|ZP_18768132.1| putative cold-shock protein [Escherichia coli EC1866]
gi|425391012|ref|ZP_18774394.1| putative cold-shock protein [Escherichia coli EC1868]
gi|425397128|ref|ZP_18780103.1| putative cold-shock protein [Escherichia coli EC1869]
gi|425403102|ref|ZP_18785643.1| putative cold-shock protein [Escherichia coli EC1870]
gi|425409638|ref|ZP_18791727.1| putative cold-shock protein [Escherichia coli NE098]
gi|425415949|ref|ZP_18797510.1| putative cold-shock protein [Escherichia coli FRIK523]
gi|425427077|ref|ZP_18808051.1| putative cold-shock protein [Escherichia coli 0.1304]
gi|427804145|ref|ZP_18971212.1| homolog of Salmonella cold shock protein [Escherichia coli
chi7122]
gi|427808727|ref|ZP_18975792.1| homolog of Salmonella cold shock protein [Escherichia coli]
gi|428951889|ref|ZP_19023940.1| cold shock-like protein CspG [Escherichia coli 88.1042]
gi|428957772|ref|ZP_19029381.1| cold shock-like protein CspG [Escherichia coli 89.0511]
gi|428964104|ref|ZP_19035209.1| cold shock-like protein CspG [Escherichia coli 90.0091]
gi|428976696|ref|ZP_19046792.1| cold shock-like protein CspG [Escherichia coli 90.2281]
gi|428982474|ref|ZP_19052130.1| cold shock-like protein CspG [Escherichia coli 93.0055]
gi|428988681|ref|ZP_19057895.1| cold shock-like protein CspG [Escherichia coli 93.0056]
gi|428994496|ref|ZP_19063329.1| cold shock-like protein CspG [Escherichia coli 94.0618]
gi|429006818|ref|ZP_19074646.1| cold shock-like protein CspG [Escherichia coli 95.1288]
gi|429019348|ref|ZP_19086063.1| cold shock-like protein CspG [Escherichia coli 96.0428]
gi|429031288|ref|ZP_19097088.1| cold shock-like protein CspG [Escherichia coli 96.0939]
gi|429037427|ref|ZP_19102804.1| cold shock-like protein CspG [Escherichia coli 96.0932]
gi|429049139|ref|ZP_19113785.1| cold shock-like protein CspG [Escherichia coli 97.0003]
gi|429054510|ref|ZP_19118970.1| cold shock-like protein CspG [Escherichia coli 97.1742]
gi|429072229|ref|ZP_19135565.1| putative cold-shock protein [Escherichia coli 99.0678]
gi|429723215|ref|ZP_19258104.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429775390|ref|ZP_19307387.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02030]
gi|429780712|ref|ZP_19312658.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784629|ref|ZP_19316538.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02092]
gi|429789966|ref|ZP_19321838.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02093]
gi|429796196|ref|ZP_19328019.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02281]
gi|429802121|ref|ZP_19333896.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02318]
gi|429805753|ref|ZP_19337497.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02913]
gi|429811349|ref|ZP_19343048.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-03439]
gi|429816700|ref|ZP_19348356.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-04080]
gi|429821910|ref|ZP_19353521.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-03943]
gi|429831253|ref|ZP_19362002.1| cold shock-like protein CspG [Escherichia coli 97.0010]
gi|429907577|ref|ZP_19373545.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429911779|ref|ZP_19377735.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917613|ref|ZP_19383553.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922651|ref|ZP_19388572.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429923504|ref|ZP_19389420.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429932399|ref|ZP_19398293.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934001|ref|ZP_19399891.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939660|ref|ZP_19405534.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429947302|ref|ZP_19413157.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949934|ref|ZP_19415782.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429958212|ref|ZP_19424041.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432352940|ref|ZP_19596223.1| cold shock-like protein CspG [Escherichia coli KTE2]
gi|432357308|ref|ZP_19600552.1| cold shock-like protein CspG [Escherichia coli KTE4]
gi|432361733|ref|ZP_19604917.1| cold shock-like protein CspG [Escherichia coli KTE5]
gi|432369045|ref|ZP_19612146.1| cold shock-like protein CspG [Escherichia coli KTE10]
gi|432376100|ref|ZP_19619108.1| cold shock-like protein CspG [Escherichia coli KTE12]
gi|432380604|ref|ZP_19623556.1| cold shock-like protein CspG [Escherichia coli KTE15]
gi|432386472|ref|ZP_19629368.1| cold shock-like protein CspG [Escherichia coli KTE16]
gi|432391014|ref|ZP_19633872.1| cold shock-like protein CspG [Escherichia coli KTE21]
gi|432396854|ref|ZP_19639639.1| cold shock-like protein CspG [Escherichia coli KTE25]
gi|432401173|ref|ZP_19643927.1| cold shock-like protein CspG [Escherichia coli KTE26]
gi|432405786|ref|ZP_19648506.1| cold shock-like protein CspG [Escherichia coli KTE28]
gi|432410971|ref|ZP_19653652.1| cold shock-like protein CspG [Escherichia coli KTE39]
gi|432415979|ref|ZP_19658603.1| cold shock-like protein CspG [Escherichia coli KTE44]
gi|432421091|ref|ZP_19663646.1| cold shock-like protein CspG [Escherichia coli KTE178]
gi|432425230|ref|ZP_19667745.1| cold shock-like protein CspG [Escherichia coli KTE181]
gi|432431020|ref|ZP_19673463.1| cold shock-like protein CspG [Escherichia coli KTE187]
gi|432435548|ref|ZP_19677947.1| cold shock-like protein CspG [Escherichia coli KTE188]
gi|432440354|ref|ZP_19682703.1| cold shock-like protein CspG [Escherichia coli KTE189]
gi|432445461|ref|ZP_19687767.1| cold shock-like protein CspG [Escherichia coli KTE191]
gi|432449184|ref|ZP_19691465.1| cold shock-like protein CspG [Escherichia coli KTE193]
gi|432455834|ref|ZP_19698033.1| cold shock-like protein CspG [Escherichia coli KTE201]
gi|432460002|ref|ZP_19702158.1| cold shock-like protein CspG [Escherichia coli KTE204]
gi|432464936|ref|ZP_19707041.1| cold shock-like protein CspG [Escherichia coli KTE205]
gi|432470337|ref|ZP_19712389.1| cold shock-like protein CspG [Escherichia coli KTE206]
gi|432475092|ref|ZP_19717098.1| cold shock-like protein CspG [Escherichia coli KTE208]
gi|432480426|ref|ZP_19722387.1| cold shock-like protein CspG [Escherichia coli KTE210]
gi|432484681|ref|ZP_19726601.1| cold shock-like protein CspG [Escherichia coli KTE212]
gi|432488624|ref|ZP_19730508.1| cold shock-like protein CspG [Escherichia coli KTE213]
gi|432494772|ref|ZP_19736588.1| cold shock-like protein CspG [Escherichia coli KTE214]
gi|432499235|ref|ZP_19741007.1| cold shock-like protein CspG [Escherichia coli KTE216]
gi|432503611|ref|ZP_19745346.1| cold shock-like protein CspG [Escherichia coli KTE220]
gi|432513216|ref|ZP_19750451.1| cold shock-like protein CspG [Escherichia coli KTE224]
gi|432521672|ref|ZP_19758827.1| cold shock-like protein CspG [Escherichia coli KTE228]
gi|432523057|ref|ZP_19760194.1| cold shock-like protein CspG [Escherichia coli KTE230]
gi|432530326|ref|ZP_19767364.1| cold shock-like protein CspG [Escherichia coli KTE233]
gi|432533212|ref|ZP_19770203.1| cold shock-like protein CspG [Escherichia coli KTE234]
gi|432537037|ref|ZP_19773954.1| cold shock-like protein CspG [Escherichia coli KTE235]
gi|432542365|ref|ZP_19779221.1| cold shock-like protein CspG [Escherichia coli KTE236]
gi|432547835|ref|ZP_19784622.1| cold shock-like protein CspG [Escherichia coli KTE237]
gi|432552974|ref|ZP_19789703.1| cold shock-like protein CspG [Escherichia coli KTE47]
gi|432558055|ref|ZP_19794743.1| cold shock-like protein CspG [Escherichia coli KTE49]
gi|432562987|ref|ZP_19799607.1| cold shock-like protein CspG [Escherichia coli KTE51]
gi|432567985|ref|ZP_19804507.1| cold shock-like protein CspG [Escherichia coli KTE53]
gi|432572955|ref|ZP_19809445.1| cold shock-like protein CspG [Escherichia coli KTE55]
gi|432579690|ref|ZP_19816121.1| cold shock-like protein CspG [Escherichia coli KTE56]
gi|432583029|ref|ZP_19819439.1| cold shock-like protein CspG [Escherichia coli KTE57]
gi|432587242|ref|ZP_19823609.1| cold shock-like protein CspG [Escherichia coli KTE58]
gi|432592022|ref|ZP_19828349.1| cold shock-like protein CspG [Escherichia coli KTE60]
gi|432596856|ref|ZP_19833137.1| cold shock-like protein CspG [Escherichia coli KTE62]
gi|432601525|ref|ZP_19837772.1| cold shock-like protein CspG [Escherichia coli KTE66]
gi|432606789|ref|ZP_19842982.1| cold shock-like protein CspG [Escherichia coli KTE67]
gi|432610647|ref|ZP_19846818.1| cold shock-like protein CspG [Escherichia coli KTE72]
gi|432615920|ref|ZP_19852044.1| cold shock-like protein CspG [Escherichia coli KTE75]
gi|432621119|ref|ZP_19857160.1| cold shock-like protein CspG [Escherichia coli KTE76]
gi|432626593|ref|ZP_19862574.1| cold shock-like protein CspG [Escherichia coli KTE77]
gi|432630598|ref|ZP_19866542.1| cold shock-like protein CspG [Escherichia coli KTE80]
gi|432636262|ref|ZP_19872144.1| cold shock-like protein CspG [Escherichia coli KTE81]
gi|432640200|ref|ZP_19876039.1| cold shock-like protein CspG [Escherichia coli KTE83]
gi|432645404|ref|ZP_19881203.1| cold shock-like protein CspG [Escherichia coli KTE86]
gi|432650431|ref|ZP_19886191.1| cold shock-like protein CspG [Escherichia coli KTE87]
gi|432655242|ref|ZP_19890953.1| cold shock-like protein CspG [Escherichia coli KTE93]
gi|432660216|ref|ZP_19895866.1| cold shock-like protein CspG [Escherichia coli KTE111]
gi|432665269|ref|ZP_19900853.1| cold shock-like protein CspG [Escherichia coli KTE116]
gi|432669933|ref|ZP_19905473.1| cold shock-like protein CspG [Escherichia coli KTE119]
gi|432673990|ref|ZP_19909476.1| cold shock-like protein CspG [Escherichia coli KTE142]
gi|432679473|ref|ZP_19914867.1| cold shock-like protein CspG [Escherichia coli KTE143]
gi|432684825|ref|ZP_19920134.1| cold shock-like protein CspG [Escherichia coli KTE156]
gi|432690914|ref|ZP_19926153.1| cold shock-like protein CspG [Escherichia coli KTE161]
gi|432693722|ref|ZP_19928933.1| cold shock-like protein CspG [Escherichia coli KTE162]
gi|432698328|ref|ZP_19933494.1| cold shock-like protein CspG [Escherichia coli KTE169]
gi|432703559|ref|ZP_19938678.1| cold shock-like protein CspG [Escherichia coli KTE171]
gi|432709897|ref|ZP_19944961.1| cold shock-like protein CspG [Escherichia coli KTE6]
gi|432712627|ref|ZP_19947676.1| cold shock-like protein CspG [Escherichia coli KTE8]
gi|432718029|ref|ZP_19953013.1| cold shock-like protein CspG [Escherichia coli KTE9]
gi|432722481|ref|ZP_19957404.1| cold shock-like protein CspG [Escherichia coli KTE17]
gi|432727069|ref|ZP_19961950.1| cold shock-like protein CspG [Escherichia coli KTE18]
gi|432731686|ref|ZP_19966522.1| cold shock-like protein CspG [Escherichia coli KTE45]
gi|432736488|ref|ZP_19971259.1| cold shock-like protein CspG [Escherichia coli KTE42]
gi|432740755|ref|ZP_19975476.1| cold shock-like protein CspG [Escherichia coli KTE23]
gi|432744946|ref|ZP_19979645.1| cold shock-like protein CspG [Escherichia coli KTE43]
gi|432749470|ref|ZP_19984082.1| cold shock-like protein CspG [Escherichia coli KTE29]
gi|432753729|ref|ZP_19988295.1| cold shock-like protein CspG [Escherichia coli KTE22]
gi|432758764|ref|ZP_19993264.1| cold shock-like protein CspG [Escherichia coli KTE46]
gi|432764360|ref|ZP_19998806.1| cold shock-like protein CspG [Escherichia coli KTE48]
gi|432777869|ref|ZP_20012119.1| cold shock-like protein CspG [Escherichia coli KTE59]
gi|432782855|ref|ZP_20017039.1| cold shock-like protein CspG [Escherichia coli KTE63]
gi|432786658|ref|ZP_20020822.1| cold shock-like protein CspG [Escherichia coli KTE65]
gi|432792192|ref|ZP_20026281.1| cold shock-like protein CspG [Escherichia coli KTE78]
gi|432798155|ref|ZP_20032179.1| cold shock-like protein CspG [Escherichia coli KTE79]
gi|432801303|ref|ZP_20035287.1| cold shock-like protein CspG [Escherichia coli KTE84]
gi|432805114|ref|ZP_20039055.1| cold shock-like protein CspG [Escherichia coli KTE91]
gi|432813094|ref|ZP_20046939.1| cold shock-like protein CspG [Escherichia coli KTE101]
gi|432820234|ref|ZP_20053947.1| cold shock-like protein CspG [Escherichia coli KTE118]
gi|432826465|ref|ZP_20060120.1| cold shock-like protein CspG [Escherichia coli KTE123]
gi|432830965|ref|ZP_20064547.1| cold shock-like protein CspG [Escherichia coli KTE135]
gi|432834068|ref|ZP_20067610.1| cold shock-like protein CspG [Escherichia coli KTE136]
gi|432838641|ref|ZP_20072130.1| cold shock-like protein CspG [Escherichia coli KTE140]
gi|432843345|ref|ZP_20076610.1| cold shock-like protein CspG [Escherichia coli KTE141]
gi|432849438|ref|ZP_20080660.1| cold shock-like protein CspG [Escherichia coli KTE144]
gi|432860788|ref|ZP_20085872.1| cold shock-like protein CspG [Escherichia coli KTE146]
gi|432874158|ref|ZP_20093295.1| cold shock-like protein CspG [Escherichia coli KTE147]
gi|432880724|ref|ZP_20097259.1| cold shock-like protein CspG [Escherichia coli KTE154]
gi|432885467|ref|ZP_20099988.1| cold shock-like protein CspG [Escherichia coli KTE158]
gi|432893706|ref|ZP_20105718.1| cold shock-like protein CspG [Escherichia coli KTE165]
gi|432897901|ref|ZP_20108732.1| cold shock-like protein CspG [Escherichia coli KTE192]
gi|432903610|ref|ZP_20113026.1| cold shock-like protein CspG [Escherichia coli KTE194]
gi|432911543|ref|ZP_20117818.1| cold shock-like protein CspG [Escherichia coli KTE190]
gi|432918192|ref|ZP_20122597.1| cold shock-like protein CspG [Escherichia coli KTE173]
gi|432925482|ref|ZP_20127511.1| cold shock-like protein CspG [Escherichia coli KTE175]
gi|432933553|ref|ZP_20133221.1| cold shock-like protein CspG [Escherichia coli KTE184]
gi|432943057|ref|ZP_20140181.1| cold shock-like protein CspG [Escherichia coli KTE183]
gi|432946293|ref|ZP_20141922.1| cold shock-like protein CspG [Escherichia coli KTE196]
gi|432954287|ref|ZP_20146406.1| cold shock-like protein CspG [Escherichia coli KTE197]
gi|432967086|ref|ZP_20156002.1| cold shock-like protein CspG [Escherichia coli KTE203]
gi|432971136|ref|ZP_20160011.1| cold shock-like protein CspG [Escherichia coli KTE207]
gi|432977628|ref|ZP_20166451.1| cold shock-like protein CspG [Escherichia coli KTE209]
gi|432980443|ref|ZP_20169221.1| cold shock-like protein CspG [Escherichia coli KTE211]
gi|432984604|ref|ZP_20173340.1| cold shock-like protein CspG [Escherichia coli KTE215]
gi|432990068|ref|ZP_20178734.1| cold shock-like protein CspG [Escherichia coli KTE217]
gi|432994700|ref|ZP_20183314.1| cold shock-like protein CspG [Escherichia coli KTE218]
gi|432999118|ref|ZP_20187656.1| cold shock-like protein CspG [Escherichia coli KTE223]
gi|433004442|ref|ZP_20192880.1| cold shock-like protein CspG [Escherichia coli KTE227]
gi|433011697|ref|ZP_20200101.1| cold shock-like protein CspG [Escherichia coli KTE229]
gi|433013192|ref|ZP_20201566.1| cold shock-like protein CspG [Escherichia coli KTE104]
gi|433017954|ref|ZP_20206212.1| cold shock-like protein CspG [Escherichia coli KTE105]
gi|433022829|ref|ZP_20210841.1| cold shock-like protein CspG [Escherichia coli KTE106]
gi|433027999|ref|ZP_20215868.1| cold shock-like protein CspG [Escherichia coli KTE109]
gi|433032498|ref|ZP_20220268.1| cold shock-like protein CspG [Escherichia coli KTE112]
gi|433038016|ref|ZP_20225628.1| cold shock-like protein CspG [Escherichia coli KTE113]
gi|433042497|ref|ZP_20230017.1| cold shock-like protein CspG [Escherichia coli KTE117]
gi|433047126|ref|ZP_20234534.1| cold shock-like protein CspG [Escherichia coli KTE120]
gi|433052355|ref|ZP_20239578.1| cold shock-like protein CspG [Escherichia coli KTE122]
gi|433057263|ref|ZP_20244345.1| cold shock-like protein CspG [Escherichia coli KTE124]
gi|433067235|ref|ZP_20254057.1| cold shock-like protein CspG [Escherichia coli KTE128]
gi|433072022|ref|ZP_20258715.1| cold shock-like protein CspG [Escherichia coli KTE129]
gi|433077129|ref|ZP_20263690.1| cold shock-like protein CspG [Escherichia coli KTE131]
gi|433081901|ref|ZP_20268375.1| cold shock-like protein CspG [Escherichia coli KTE133]
gi|433086580|ref|ZP_20272974.1| cold shock-like protein CspG [Escherichia coli KTE137]
gi|433091317|ref|ZP_20277611.1| cold shock-like protein CspG [Escherichia coli KTE138]
gi|433095866|ref|ZP_20282076.1| cold shock-like protein CspG [Escherichia coli KTE139]
gi|433100485|ref|ZP_20286592.1| cold shock-like protein CspG [Escherichia coli KTE145]
gi|433105087|ref|ZP_20291103.1| cold shock-like protein CspG [Escherichia coli KTE148]
gi|433110293|ref|ZP_20296165.1| cold shock-like protein CspG [Escherichia coli KTE150]
gi|433114855|ref|ZP_20300668.1| cold shock-like protein CspG [Escherichia coli KTE153]
gi|433119521|ref|ZP_20305226.1| cold shock-like protein CspG [Escherichia coli KTE157]
gi|433124518|ref|ZP_20310103.1| cold shock-like protein CspG [Escherichia coli KTE160]
gi|433129342|ref|ZP_20314808.1| cold shock-like protein CspG [Escherichia coli KTE163]
gi|433134168|ref|ZP_20319538.1| cold shock-like protein CspG [Escherichia coli KTE166]
gi|433138578|ref|ZP_20323860.1| cold shock-like protein CspG [Escherichia coli KTE167]
gi|433143598|ref|ZP_20328762.1| cold shock-like protein CspG [Escherichia coli KTE168]
gi|433148361|ref|ZP_20333424.1| cold shock-like protein CspG [Escherichia coli KTE174]
gi|433153069|ref|ZP_20338034.1| cold shock-like protein CspG [Escherichia coli KTE176]
gi|433157965|ref|ZP_20342827.1| cold shock-like protein CspG [Escherichia coli KTE177]
gi|433162812|ref|ZP_20347571.1| cold shock-like protein CspG [Escherichia coli KTE179]
gi|433167823|ref|ZP_20352488.1| cold shock-like protein CspG [Escherichia coli KTE180]
gi|433172818|ref|ZP_20357370.1| cold shock-like protein CspG [Escherichia coli KTE232]
gi|433177520|ref|ZP_20361966.1| cold shock-like protein CspG [Escherichia coli KTE82]
gi|433182509|ref|ZP_20366803.1| cold shock-like protein CspG [Escherichia coli KTE85]
gi|433187761|ref|ZP_20371878.1| cold shock-like protein CspG [Escherichia coli KTE88]
gi|433192981|ref|ZP_20376992.1| cold shock-like protein CspG [Escherichia coli KTE90]
gi|433197579|ref|ZP_20381500.1| cold shock-like protein CspG [Escherichia coli KTE94]
gi|433202523|ref|ZP_20386319.1| cold shock-like protein CspG [Escherichia coli KTE95]
gi|433207089|ref|ZP_20390784.1| cold shock-like protein CspG [Escherichia coli KTE97]
gi|433211840|ref|ZP_20395451.1| cold shock-like protein CspG [Escherichia coli KTE99]
gi|433322180|ref|ZP_20399664.1| cold shock protein CspG [Escherichia coli J96]
gi|442595375|ref|ZP_21013224.1| Cold shock protein CspG [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442599865|ref|ZP_21017570.1| Cold shock protein CspG [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442606525|ref|ZP_21021325.1| Cold shock protein CspG [Escherichia coli Nissle 1917]
gi|443617106|ref|YP_007380962.1| cold shock protein CspG [Escherichia coli APEC O78]
gi|444923579|ref|ZP_21243203.1| cold shock-like protein CspG [Escherichia coli 09BKT078844]
gi|444929792|ref|ZP_21248923.1| cold shock-like protein CspG [Escherichia coli 99.0814]
gi|444935009|ref|ZP_21253923.1| cold shock-like protein CspG [Escherichia coli 99.0815]
gi|444940593|ref|ZP_21259221.1| cold shock-like protein CspG [Escherichia coli 99.0816]
gi|444946233|ref|ZP_21264635.1| cold shock-like protein CspG [Escherichia coli 99.0839]
gi|444951855|ref|ZP_21270054.1| cold shock-like protein CspG [Escherichia coli 99.0848]
gi|444957277|ref|ZP_21275255.1| cold shock-like protein CspG [Escherichia coli 99.1753]
gi|444962607|ref|ZP_21280330.1| cold shock-like protein CspG [Escherichia coli 99.1775]
gi|444968301|ref|ZP_21285757.1| cold shock-like protein CspG [Escherichia coli 99.1793]
gi|444973764|ref|ZP_21291026.1| cold shock-like protein CspG [Escherichia coli 99.1805]
gi|444979498|ref|ZP_21296473.1| cold shock-like protein CspG [Escherichia coli ATCC 700728]
gi|444984630|ref|ZP_21301482.1| cold shock-like protein CspG [Escherichia coli PA11]
gi|444989891|ref|ZP_21306614.1| cold shock-like protein CspG [Escherichia coli PA19]
gi|444995112|ref|ZP_21311694.1| cold shock-like protein CspG [Escherichia coli PA13]
gi|445000759|ref|ZP_21317204.1| cold shock-like protein CspG [Escherichia coli PA2]
gi|445006199|ref|ZP_21322520.1| cold shock-like protein CspG [Escherichia coli PA47]
gi|445011303|ref|ZP_21327480.1| cold shock-like protein CspG [Escherichia coli PA48]
gi|445022578|ref|ZP_21338485.1| cold shock-like protein CspG [Escherichia coli 7.1982]
gi|445039033|ref|ZP_21354485.1| cold shock-like protein CspG [Escherichia coli PA35]
gi|445044321|ref|ZP_21359641.1| cold shock-like protein CspG [Escherichia coli 3.4880]
gi|445049858|ref|ZP_21365001.1| cold shock-like protein CspG [Escherichia coli 95.0083]
gi|445055497|ref|ZP_21370428.1| cold shock-like protein CspG [Escherichia coli 99.0670]
gi|450187371|ref|ZP_21889807.1| cold shock protein CspG [Escherichia coli SEPT362]
gi|450212980|ref|ZP_21894721.1| cold shock protein CspG [Escherichia coli O08]
gi|450241326|ref|ZP_21899574.1| cold shock protein CspG [Escherichia coli S17]
gi|452970453|ref|ZP_21968680.1| cold-shock protein [Escherichia coli O157:H7 str. EC4009]
gi|71154162|sp|P0A980.1|CSPG_ECO57 RecName: Full=Cold shock-like protein CspG; Short=CPS-G
gi|71154163|sp|P0A979.1|CSPG_ECOL6 RecName: Full=Cold shock-like protein CspG; Short=CPS-G
gi|71154164|sp|P0A978.1|CSPG_ECOLI RecName: Full=Cold shock-like protein CspG; Short=CPS-G
gi|71154165|sp|P0A981.1|CSPG_SHIFL RecName: Full=Cold shock-like protein CspG; Short=CPS-G
gi|26107408|gb|AAN79591.1|AE016758_195 Cold shock-like protein cspG [Escherichia coli CFT073]
gi|1468921|dbj|BAA09669.1| cold shock potein CspG [Escherichia coli K-12]
gi|2226344|gb|AAB61741.1| CspG [Escherichia coli str. K-12 substr. W3110]
gi|2367114|gb|AAC74075.1| cold shock protein homolog, cold-inducible [Escherichia coli str.
K-12 substr. MG1655]
gi|4062549|dbj|BAA35756.1| DNA-binding transcriptional regulator [Escherichia coli str. K12
substr. W3110]
gi|13360605|dbj|BAB34568.1| cold shock-like protein CspG [Escherichia coli O157:H7 str.
Sakai]
gi|73855024|gb|AAZ87731.1| cold shock protein-like protein [Shigella sonnei Ss046]
gi|81246098|gb|ABB66806.1| CspG [Shigella boydii Sb227]
gi|91071654|gb|ABE06535.1| cold shock-like protein G [Escherichia coli UTI89]
gi|110342763|gb|ABG69000.1| cold shock-like protein CspG [Escherichia coli 536]
gi|157066188|gb|ABV05443.1| cold shock DNA-binding protein [Escherichia coli HS]
gi|157079963|gb|ABV19671.1| cold shock DNA-binding protein [Escherichia coli E24377A]
gi|169755539|gb|ACA78238.1| cold-shock DNA-binding domain protein [Escherichia coli ATCC
8739]
gi|169888483|gb|ACB02190.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
substr. DH10B]
gi|170520909|gb|ACB19087.1| cold shock DNA-binding protein [Escherichia coli SMS-3-5]
gi|187427648|gb|ACD06922.1| cold shock DNA-binding protein [Shigella boydii CDC 3083-94]
gi|187770523|gb|EDU34367.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4196]
gi|188018100|gb|EDU56222.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4113]
gi|188488373|gb|EDU63476.1| cold shock DNA-binding protein [Escherichia coli 53638]
gi|189001168|gb|EDU70154.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4076]
gi|189358364|gb|EDU76783.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4401]
gi|189363259|gb|EDU81678.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|189366600|gb|EDU85016.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4501]
gi|189372631|gb|EDU91047.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC869]
gi|189377110|gb|EDU95526.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC508]
gi|190903370|gb|EDV63090.1| cold shock DNA-binding protein [Escherichia coli B7A]
gi|190907322|gb|EDV66920.1| cold shock DNA-binding protein [Escherichia coli F11]
gi|192926034|gb|EDV80678.1| cold shock DNA-binding protein [Escherichia coli E22]
gi|192955916|gb|EDV86385.1| cold shock DNA-binding protein [Escherichia coli E110019]
gi|194412114|gb|EDX28423.1| cold shock DNA-binding protein [Escherichia coli B171]
gi|194419298|gb|EDX35380.1| cold shock DNA-binding protein [Shigella dysenteriae 1012]
gi|194423008|gb|EDX39002.1| cold shock DNA-binding protein [Escherichia coli 101-1]
gi|208726759|gb|EDZ76360.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208731626|gb|EDZ80314.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208738137|gb|EDZ85820.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209159674|gb|ACI37107.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|209774128|gb|ACI85376.1| cold shock-like protein CspG [Escherichia coli]
gi|209774130|gb|ACI85377.1| cold shock-like protein CspG [Escherichia coli]
gi|209774132|gb|ACI85378.1| cold shock-like protein CspG [Escherichia coli]
gi|209774134|gb|ACI85379.1| cold shock-like protein CspG [Escherichia coli]
gi|209774136|gb|ACI85380.1| cold shock-like protein CspG [Escherichia coli]
gi|209911501|dbj|BAG76575.1| cold shock-like protein [Escherichia coli SE11]
gi|215264178|emb|CAS08522.1| DNA-binding transcriptional regulator [Escherichia coli O127:H6
str. E2348/69]
gi|217320582|gb|EEC29006.1| cold shock DNA-binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|218351257|emb|CAU96961.1| DNA-binding transcriptional regulator [Escherichia coli 55989]
gi|218360345|emb|CAQ97895.1| DNA-binding transcriptional regulator [Escherichia coli IAI1]
gi|218364650|emb|CAR02336.1| DNA-binding transcriptional regulator [Escherichia coli S88]
gi|218370484|emb|CAR18291.1| DNA-binding transcriptional regulator [Escherichia coli IAI39]
gi|218426442|emb|CAR07268.1| DNA-binding transcriptional regulator [Escherichia coli ED1a]
gi|218431503|emb|CAR12381.1| DNA-binding transcriptional regulator [Escherichia coli UMN026]
gi|222032705|emb|CAP75444.1| Cold shock-like protein cspG [Escherichia coli LF82]
gi|226898242|gb|EEH84501.1| cold shock protein CspG [Escherichia sp. 3_2_53FAA]
gi|227838810|gb|EEJ49276.1| CspA family cold shock transcriptional regulator [Escherichia
coli 83972]
gi|238860954|gb|ACR62952.1| DNA-binding transcriptional regulator [Escherichia coli BW2952]
gi|242376803|emb|CAQ31516.1| cold shock protein CspG [Escherichia coli BL21(DE3)]
gi|253325025|gb|ACT29627.1| cold-shock DNA-binding domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973003|gb|ACT38674.1| DNA-binding transcriptional regulator [Escherichia coli B str.
REL606]
gi|253977217|gb|ACT42887.1| DNA-binding transcriptional regulator [Escherichia coli
BL21(DE3)]
gi|254591647|gb|ACT71008.1| DNA-binding transcriptional regulator [Escherichia coli O157:H7
str. TW14359]
gi|257753342|dbj|BAI24844.1| DNA-binding transcriptional regulator CspG [Escherichia coli
O26:H11 str. 11368]
gi|257758384|dbj|BAI29881.1| DNA-binding transcriptional regulator CspG [Escherichia coli
O103:H2 str. 12009]
gi|257763554|dbj|BAI35049.1| DNA-binding transcriptional regulator CspG [Escherichia coli
O111:H- str. 11128]
gi|260449865|gb|ACX40287.1| cold-shock DNA-binding domain protein [Escherichia coli DH1]
gi|281178106|dbj|BAI54436.1| cold shock-like protein [Escherichia coli SE15]
gi|284920825|emb|CBG33888.1| cold shock-like protein [Escherichia coli 042]
gi|290761861|gb|ADD55822.1| Cold shock-like protein cspG [Escherichia coli O55:H7 str.
CB9615]
gi|291324103|gb|EFE63525.1| cold shock-like protein CspC [Escherichia coli B088]
gi|291428869|gb|EFF01894.1| cold shock-like protein cspG [Escherichia coli FVEC1412]
gi|291434323|gb|EFF07296.1| cold shock protein [Escherichia coli B185]
gi|291469835|gb|EFF12319.1| conserved hypothetical protein [Escherichia coli B354]
gi|294493742|gb|ADE92498.1| cold shock DNA-binding protein [Escherichia coli IHE3034]
gi|298279764|gb|EFI21272.1| cold shock-like protein cspG [Escherichia coli FVEC1302]
gi|299881188|gb|EFI89399.1| transcriptional repressor activity CueR [Escherichia coli MS
196-1]
gi|300300365|gb|EFJ56750.1| transcriptional repressor activity CueR [Escherichia coli MS
185-1]
gi|300307058|gb|EFJ61578.1| transcriptional repressor activity CueR [Escherichia coli MS
200-1]
gi|300315437|gb|EFJ65221.1| transcriptional repressor activity CueR [Escherichia coli MS
175-1]
gi|300359773|gb|EFJ75643.1| transcriptional repressor activity CueR [Escherichia coli MS
198-1]
gi|300397232|gb|EFJ80770.1| transcriptional repressor activity CueR [Escherichia coli MS
69-1]
gi|300405111|gb|EFJ88649.1| transcriptional repressor activity CueR [Escherichia coli MS
84-1]
gi|300409716|gb|EFJ93254.1| transcriptional repressor activity CueR [Escherichia coli MS
45-1]
gi|300412086|gb|EFJ95396.1| transcriptional repressor activity CueR [Escherichia coli MS
115-1]
gi|300418547|gb|EFK01858.1| transcriptional repressor activity CueR [Escherichia coli MS
182-1]
gi|300450965|gb|EFK14585.1| transcriptional repressor activity CueR [Escherichia coli MS
116-1]
gi|300457311|gb|EFK20804.1| transcriptional repressor activity CueR [Escherichia coli MS
21-1]
gi|300462807|gb|EFK26300.1| transcriptional repressor activity CueR [Escherichia coli MS
187-1]
gi|300523583|gb|EFK44652.1| transcriptional repressor activity CueR [Escherichia coli MS
119-7]
gi|300528027|gb|EFK49089.1| transcriptional repressor activity CueR [Escherichia coli MS
107-1]
gi|300842232|gb|EFK69992.1| transcriptional repressor activity CueR [Escherichia coli MS
124-1]
gi|300846210|gb|EFK73970.1| transcriptional repressor activity CueR [Escherichia coli MS
78-1]
gi|301075411|gb|EFK90217.1| transcriptional repressor activity CueR [Escherichia coli MS
146-1]
gi|305853334|gb|EFM53773.1| cold shock protein CspG [Escherichia coli NC101]
gi|306908180|gb|EFN38679.1| cold-shock DNA-binding domain protein [Escherichia coli W]
gi|307552814|gb|ADN45589.1| cold shock-like protein CspG [Escherichia coli ABU 83972]
gi|307627598|gb|ADN71902.1| cold shock protein CspG [Escherichia coli UM146]
gi|308121325|gb|EFO58587.1| transcriptional repressor activity CueR [Escherichia coli MS
145-7]
gi|309701267|emb|CBJ00567.1| cold shock-like protein [Escherichia coli ETEC H10407]
gi|312286354|gb|EFR14267.1| cold shock-like protein cspG [Escherichia coli 2362-75]
gi|312945495|gb|ADR26322.1| cold shock protein CspG [Escherichia coli O83:H1 str. NRG 857C]
gi|315060274|gb|ADT74601.1| DNA-binding transcriptional regulator [Escherichia coli W]
gi|315135640|dbj|BAJ42799.1| cold shock-like protein cspG [Escherichia coli DH1]
gi|315258037|gb|EFU38005.1| transcriptional repressor activity CueR [Escherichia coli MS
85-1]
gi|315287611|gb|EFU47017.1| transcriptional repressor activity CueR [Escherichia coli MS
110-3]
gi|315291158|gb|EFU50521.1| transcriptional repressor activity CueR [Escherichia coli MS
153-1]
gi|315296282|gb|EFU55588.1| transcriptional repressor activity CueR [Escherichia coli MS
16-3]
gi|320175185|gb|EFW50295.1| Cold shock protein CspG [Shigella dysenteriae CDC 74-1112]
gi|320178568|gb|EFW53533.1| Cold shock protein CspG [Shigella boydii ATCC 9905]
gi|320187200|gb|EFW61901.1| Cold shock protein CspG [Shigella flexneri CDC 796-83]
gi|320192513|gb|EFW67155.1| Cold shock protein CspG [Escherichia coli O157:H7 str. EC1212]
gi|320196522|gb|EFW71145.1| Cold shock protein CspG [Escherichia coli WV_060327]
gi|320200218|gb|EFW74806.1| Cold shock protein CspG [Escherichia coli EC4100B]
gi|320637857|gb|EFX07649.1| cold shock protein CspG [Escherichia coli O157:H7 str. G5101]
gi|320642982|gb|EFX12183.1| cold shock protein CspG [Escherichia coli O157:H- str. 493-89]
gi|320648439|gb|EFX17094.1| cold shock protein CspG [Escherichia coli O157:H- str. H 2687]
gi|320653756|gb|EFX21830.1| cold shock protein CspG [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659598|gb|EFX27161.1| cold shock protein CspG [Escherichia coli O55:H7 str. USDA 5905]
gi|320664369|gb|EFX31520.1| cold shock protein CspG [Escherichia coli O157:H7 str. LSU-61]
gi|323157489|gb|EFZ43599.1| cold shock-like protein cspG [Escherichia coli EPECa14]
gi|323158184|gb|EFZ44278.1| cold shock-like protein cspG [Escherichia coli E128010]
gi|323165477|gb|EFZ51264.1| cold shock-like protein cspG [Shigella sonnei 53G]
gi|323174903|gb|EFZ60518.1| cold shock-like protein cspG [Escherichia coli LT-68]
gi|323175877|gb|EFZ61471.1| cold shock-like protein cspG [Escherichia coli OK1180]
gi|323185302|gb|EFZ70666.1| cold shock-like protein cspG [Escherichia coli OK1357]
gi|323379166|gb|ADX51434.1| cold-shock DNA-binding domain protein [Escherichia coli KO11FL]
gi|323938094|gb|EGB34356.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli E1520]
gi|323942904|gb|EGB39069.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli E482]
gi|323947221|gb|EGB43229.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H120]
gi|323953315|gb|EGB49181.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H252]
gi|323958282|gb|EGB53991.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H263]
gi|323962875|gb|EGB58450.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli H489]
gi|323967237|gb|EGB62661.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli M863]
gi|323973135|gb|EGB68327.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli TA007]
gi|323976631|gb|EGB71719.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli TW10509]
gi|324009920|gb|EGB79139.1| transcriptional repressor activity CueR [Escherichia coli MS
57-2]
gi|324013378|gb|EGB82597.1| transcriptional repressor activity CueR [Escherichia coli MS
60-1]
gi|324019120|gb|EGB88339.1| transcriptional repressor activity CueR [Escherichia coli MS
117-3]
gi|324117147|gb|EGC11055.1| cold-shock DNA-binding domain-containing protein [Escherichia
coli E1167]
gi|326338568|gb|EGD62395.1| Cold shock protein CspG [Escherichia coli O157:H7 str. 1125]
gi|326347791|gb|EGD71507.1| Cold shock protein CspG [Escherichia coli O157:H7 str. 1044]
gi|327253387|gb|EGE65025.1| cold shock-like protein cspG [Escherichia coli STEC_7v]
gi|330910756|gb|EGH39266.1| cold shock protein CspG [Escherichia coli AA86]
gi|331038319|gb|EGI10539.1| conserved domain protein [Escherichia coli H736]
gi|331044996|gb|EGI17123.1| conserved domain protein [Escherichia coli M605]
gi|331050292|gb|EGI22350.1| conserved domain protein [Escherichia coli M718]
gi|331055298|gb|EGI27307.1| conserved domain protein [Escherichia coli TA206]
gi|331060819|gb|EGI32783.1| conserved domain protein [Escherichia coli TA143]
gi|331064966|gb|EGI36861.1| conserved domain protein [Escherichia coli TA271]
gi|331070167|gb|EGI41533.1| conserved domain protein [Escherichia coli TA280]
gi|331075469|gb|EGI46767.1| conserved domain protein [Escherichia coli H591]
gi|331080126|gb|EGI51305.1| conserved domain protein [Escherichia coli H299]
gi|332092462|gb|EGI97535.1| cold shock-like protein cspG [Shigella boydii 5216-82]
gi|332093343|gb|EGI98401.1| cold shock-like protein cspG [Shigella boydii 3594-74]
gi|332095879|gb|EGJ00886.1| cold shock-like protein cspG [Shigella dysenteriae 155-74]
gi|332102180|gb|EGJ05526.1| cold shock protein CspG [Shigella sp. D9]
gi|332342432|gb|AEE55766.1| cold shock-like protein CspG [Escherichia coli UMNK88]
gi|333969080|gb|AEG35885.1| Cold shock protein [Escherichia coli NA114]
gi|338770830|gb|EGP25583.1| CspB [Escherichia coli PCN033]
gi|339414108|gb|AEJ55780.1| cold shock-like protein cspG (CPS-G) [Escherichia coli UMNF18]
gi|340735142|gb|EGR64230.1| cold shock protein CspG [Escherichia coli O104:H4 str. 01-09591]
gi|340740957|gb|EGR75134.1| cold shock protein CspG [Escherichia coli O104:H4 str. LB226692]
gi|341918519|gb|EGT68133.1| hypothetical protein C22711_2162 [Escherichia coli O104:H4 str.
C227-11]
gi|342361693|gb|EGU25826.1| cold shock protein CspG [Escherichia coli XH140A]
gi|342927239|gb|EGU95961.1| putative cold shock protein [Escherichia coli MS 79-10]
gi|344192127|gb|EGV46226.1| cold shock protein CspG [Escherichia coli XH001]
gi|345339074|gb|EGW71500.1| cold shock-like protein cspG [Escherichia coli STEC_C165-02]
gi|345341925|gb|EGW74323.1| cold shock-like protein cspG [Escherichia coli STEC_B2F1]
gi|345344204|gb|EGW76579.1| cold shock-like protein cspG [Escherichia coli 2534-86]
gi|345352005|gb|EGW84255.1| cold shock-like protein cspG [Escherichia coli STEC_94C]
gi|345358456|gb|EGW90643.1| cold shock-like protein cspG [Escherichia coli 3030-1]
gi|345362581|gb|EGW94727.1| cold shock-like protein cspG [Escherichia coli STEC_DG131-3]
gi|345364882|gb|EGW96997.1| cold shock-like protein cspG [Escherichia coli STEC_EH250]
gi|345378228|gb|EGX10159.1| cold shock-like protein cspG [Escherichia coli STEC_MHI813]
gi|345380625|gb|EGX12524.1| cold shock-like protein cspG [Escherichia coli G58-1]
gi|345383700|gb|EGX13571.1| cold shock-like protein cspG [Escherichia coli STEC_H.1.8]
gi|345390339|gb|EGX20138.1| cold shock-like protein cspG [Escherichia coli STEC_S1191]
gi|345394826|gb|EGX24580.1| cold shock-like protein cspG [Escherichia coli TX1999]
gi|349737125|gb|AEQ11831.1| putative cold shock protein, cold-inducible [Escherichia coli
O7:K1 str. CE10]
gi|354856780|gb|EHF17238.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
04-8351]
gi|354857973|gb|EHF18426.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
C227-11]
gi|354864741|gb|EHF25170.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
C236-11]
gi|354875111|gb|EHF35477.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
09-7901]
gi|354879014|gb|EHF39361.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4404]
gi|354882806|gb|EHF43128.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-3677]
gi|354884428|gb|EHF44741.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4522]
gi|354887485|gb|EHF47760.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4623]
gi|354900680|gb|EHF60814.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354903825|gb|EHF63925.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354906188|gb|EHF66270.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354917105|gb|EHF77075.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354921166|gb|EHF81091.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-4632 C4]
gi|355352469|gb|EHG01644.1| cold shock protein CspG [Escherichia coli cloneA_i1]
gi|355419415|gb|AER83612.1| cold shock protein CspG [Escherichia coli str. 'clone D i2']
gi|355424335|gb|AER88531.1| cold shock protein CspG [Escherichia coli str. 'clone D i14']
gi|359331672|dbj|BAL38119.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
substr. MDS42]
gi|371595908|gb|EHN84752.1| cold shock-like protein CspG [Escherichia coli H494]
gi|371599443|gb|EHN88230.1| cold shock-like protein CspG [Escherichia coli TA124]
gi|371607939|gb|EHN96502.1| cold shock-like protein cspG [Escherichia coli E101]
gi|371609987|gb|EHN98520.1| cold shock-like protein cspG [Escherichia coli H397]
gi|371612306|gb|EHO00818.1| cold shock-like protein cspG [Escherichia coli B093]
gi|373246749|gb|EHP66199.1| cold shock-like protein CspG [Escherichia coli 4_1_47FAA]
gi|374358094|gb|AEZ39801.1| cold shock protein CspG [Escherichia coli O55:H7 str. RM12579]
gi|375319212|gb|EHS65431.1| cold shock protein CspG [Escherichia coli O157:H43 str. T22]
gi|377847979|gb|EHU12976.1| cold shock protein CspG [Escherichia coli DEC1A]
gi|377849815|gb|EHU14784.1| cold shock protein CspG [Escherichia coli DEC1C]
gi|377852346|gb|EHU17271.1| cold shock protein CspG [Escherichia coli DEC1B]
gi|377861902|gb|EHU26718.1| cold shock-like protein CspG [Escherichia coli DEC1D]
gi|377866040|gb|EHU30830.1| cold shock protein CspG [Escherichia coli DEC1E]
gi|377867506|gb|EHU32262.1| cold shock-like protein CspG [Escherichia coli DEC2A]
gi|377878328|gb|EHU42916.1| cold shock protein CspG [Escherichia coli DEC2B]
gi|377883018|gb|EHU47549.1| cold shock protein CspG [Escherichia coli DEC2D]
gi|377884172|gb|EHU48689.1| cold shock protein CspG [Escherichia coli DEC2C]
gi|377897312|gb|EHU61695.1| cold shock protein CspG [Escherichia coli DEC2E]
gi|377899075|gb|EHU63428.1| cold shock protein CspG [Escherichia coli DEC3A]
gi|377900804|gb|EHU65134.1| cold shock protein CspG [Escherichia coli DEC3B]
gi|377912096|gb|EHU76260.1| cold shock protein CspG [Escherichia coli DEC3C]
gi|377916146|gb|EHU80237.1| cold shock protein CspG [Escherichia coli DEC3D]
gi|377917855|gb|EHU81910.1| cold shock protein CspG [Escherichia coli DEC3E]
gi|377930296|gb|EHU94182.1| cold shock protein CspG [Escherichia coli DEC3F]
gi|377932088|gb|EHU95943.1| cold shock protein CspG [Escherichia coli DEC4A]
gi|377936900|gb|EHV00689.1| cold shock protein CspG [Escherichia coli DEC4B]
gi|377948367|gb|EHV12018.1| cold shock protein CspG [Escherichia coli DEC4C]
gi|377948873|gb|EHV12517.1| cold shock protein CspG [Escherichia coli DEC4D]
gi|377953289|gb|EHV16869.1| cold shock protein CspG [Escherichia coli DEC4E]
gi|377964343|gb|EHV27779.1| cold shock protein CspG [Escherichia coli DEC4F]
gi|377964615|gb|EHV28050.1| cold shock protein CspG [Escherichia coli DEC5A]
gi|377971196|gb|EHV34553.1| cold shock protein CspG [Escherichia coli DEC5B]
gi|377978102|gb|EHV41382.1| cold shock protein CspG [Escherichia coli DEC5C]
gi|377979370|gb|EHV42647.1| cold shock protein CspG [Escherichia coli DEC5D]
gi|377986679|gb|EHV49869.1| cold shock-like protein CspG [Escherichia coli DEC5E]
gi|377999134|gb|EHV62221.1| cold shock-like protein CspG [Escherichia coli DEC6A]
gi|377999827|gb|EHV62902.1| cold shock protein CspG [Escherichia coli DEC6B]
gi|378002272|gb|EHV65325.1| cold shock-like protein CspG [Escherichia coli DEC6C]
gi|378011884|gb|EHV74820.1| cold shock-like protein CspG [Escherichia coli DEC6D]
gi|378015523|gb|EHV78418.1| cold shock protein CspG [Escherichia coli DEC6E]
gi|378018198|gb|EHV81065.1| cold shock-like protein CspG [Escherichia coli DEC7A]
gi|378027146|gb|EHV89778.1| cold shock protein CspG [Escherichia coli DEC7C]
gi|378032940|gb|EHV95521.1| cold shock protein CspG [Escherichia coli DEC7D]
gi|378036483|gb|EHV99026.1| cold shock protein CspG [Escherichia coli DEC7B]
gi|378040851|gb|EHW03314.1| cold shock-like protein CspG [Escherichia coli DEC7E]
gi|378051225|gb|EHW13543.1| cold shock-like protein CspG [Escherichia coli DEC8A]
gi|378054912|gb|EHW17181.1| cold shock protein CspG [Escherichia coli DEC8B]
gi|378060284|gb|EHW22481.1| cold shock protein CspG [Escherichia coli DEC8C]
gi|378066151|gb|EHW28288.1| cold shock protein CspG [Escherichia coli DEC8D]
gi|378070497|gb|EHW32575.1| cold shock protein CspG [Escherichia coli DEC8E]
gi|378079167|gb|EHW41145.1| cold shock protein CspG [Escherichia coli DEC9A]
gi|378081337|gb|EHW43292.1| cold shock protein CspG [Escherichia coli DEC9B]
gi|378087831|gb|EHW49687.1| cold shock protein CspG [Escherichia coli DEC9C]
gi|378093853|gb|EHW55657.1| cold shock protein CspG [Escherichia coli DEC9D]
gi|378100189|gb|EHW61886.1| cold shock protein CspG [Escherichia coli DEC9E]
gi|378103507|gb|EHW65175.1| cold shock protein CspG [Escherichia coli DEC10A]
gi|378111132|gb|EHW72718.1| cold shock protein CspG [Escherichia coli DEC10B]
gi|378115331|gb|EHW76873.1| cold shock protein CspG [Escherichia coli DEC10C]
gi|378120472|gb|EHW81945.1| cold shock protein CspG [Escherichia coli DEC10D]
gi|378132438|gb|EHW93790.1| cold shock protein CspG [Escherichia coli DEC10E]
gi|378134960|gb|EHW96274.1| cold shock protein CspG [Escherichia coli DEC11A]
gi|378136303|gb|EHW97598.1| cold shock protein CspG [Escherichia coli DEC10F]
gi|378145383|gb|EHX06549.1| cold shock protein CspG [Escherichia coli DEC11B]
gi|378152065|gb|EHX13167.1| cold shock-like protein CspG [Escherichia coli DEC11D]
gi|378154928|gb|EHX15992.1| cold shock-like protein CspG [Escherichia coli DEC11C]
gi|378160339|gb|EHX21336.1| cold shock-like protein CspG [Escherichia coli DEC11E]
gi|378172096|gb|EHX32955.1| cold shock protein CspG [Escherichia coli DEC12B]
gi|378173316|gb|EHX34156.1| cold shock-like protein CspG [Escherichia coli DEC12A]
gi|378174802|gb|EHX35624.1| cold shock-like protein CspG [Escherichia coli DEC12C]
gi|378189047|gb|EHX49641.1| cold shock protein CspG [Escherichia coli DEC13A]
gi|378192884|gb|EHX53430.1| cold shock protein CspG [Escherichia coli DEC12E]
gi|378204717|gb|EHX65133.1| cold shock protein CspG [Escherichia coli DEC13B]
gi|378206548|gb|EHX66951.1| cold shock protein CspG [Escherichia coli DEC13C]
gi|378206902|gb|EHX67304.1| cold shock protein CspG [Escherichia coli DEC13D]
gi|378216509|gb|EHX76796.1| cold shock protein CspG [Escherichia coli DEC13E]
gi|378220984|gb|EHX81235.1| cold shock-like protein CspG [Escherichia coli DEC14A]
gi|378223798|gb|EHX84011.1| cold shock protein CspG [Escherichia coli DEC14B]
gi|378230947|gb|EHX91059.1| cold shock protein CspG [Escherichia coli DEC14C]
gi|378234849|gb|EHX94925.1| cold shock protein CspG [Escherichia coli DEC14D]
gi|378240293|gb|EHY00266.1| cold shock protein CspG [Escherichia coli DEC15A]
gi|378248710|gb|EHY08621.1| cold shock protein CspG [Escherichia coli DEC15B]
gi|378250522|gb|EHY10426.1| cold shock protein CspG [Escherichia coli DEC15C]
gi|378256287|gb|EHY16139.1| cold shock protein CspG [Escherichia coli DEC15D]
gi|378260606|gb|EHY20407.1| cold shock protein CspG [Escherichia coli DEC15E]
gi|380348938|gb|EIA37214.1| cold shock protein CspG [Escherichia coli SCI-07]
gi|383102337|gb|AFG39846.1| Cold shock-like protein cspG [Escherichia coli P12b]
gi|383393565|gb|AFH18523.1| cold shock protein CspG [Escherichia coli KO11FL]
gi|383404493|gb|AFH10736.1| cold shock protein CspG [Escherichia coli W]
gi|383473877|gb|EID65884.1| cold shock protein CspG [Escherichia coli W26]
gi|384378410|gb|EIE36291.1| cold shock protein CspG [Escherichia coli J53]
gi|384473372|gb|EIE57414.1| cold shock protein CspG [Escherichia coli AI27]
gi|385157539|gb|EIF19530.1| cold shock protein CspG [Escherichia coli O32:H37 str. P4]
gi|385536631|gb|EIF83524.1| cold shock-like protein CspG [Escherichia coli M919]
gi|385706668|gb|EIG43706.1| cold shock-like protein CspG [Escherichia coli B799]
gi|385711823|gb|EIG48780.1| cold shock-like protein CspG [Escherichia coli H730]
gi|386122908|gb|EIG71515.1| cold shock-like protein CspG [Escherichia sp. 4_1_40B]
gi|386142707|gb|EIG83845.1| transcriptional repressor activity CueR [Escherichia coli 1.2741]
gi|386145811|gb|EIG92267.1| transcriptional repressor activity CueR [Escherichia coli
97.0246]
gi|386153824|gb|EIH05105.1| transcriptional repressor activity CueR [Escherichia coli 5.0588]
gi|386158989|gb|EIH15322.1| transcriptional repressor activity CueR [Escherichia coli
97.0259]
gi|386160810|gb|EIH22616.1| transcriptional repressor activity CueR [Escherichia coli 1.2264]
gi|386168052|gb|EIH34568.1| transcriptional repressor activity CueR [Escherichia coli
96.0497]
gi|386174157|gb|EIH46158.1| transcriptional repressor activity CueR [Escherichia coli
99.0741]
gi|386179711|gb|EIH57189.1| transcriptional repressor activity CueR [Escherichia coli 3.2608]
gi|386185832|gb|EIH68558.1| transcriptional repressor activity CueR [Escherichia coli
93.0624]
gi|386190271|gb|EIH79019.1| transcriptional repressor activity CueR [Escherichia coli 4.0522]
gi|386197246|gb|EIH91453.1| transcriptional repressor activity CueR [Escherichia coli JB1-95]
gi|386199508|gb|EIH98499.1| transcriptional repressor activity CueR [Escherichia coli 96.154]
gi|386208571|gb|EII13075.1| transcriptional repressor activity CueR [Escherichia coli 5.0959]
gi|386211783|gb|EII22237.1| transcriptional repressor activity CueR [Escherichia coli 9.0111]
gi|386219252|gb|EII35724.1| transcriptional repressor activity CueR [Escherichia coli 4.0967]
gi|386227023|gb|EII49273.1| transcriptional repressor activity CueR [Escherichia coli 2.3916]
gi|386231246|gb|EII58594.1| transcriptional repressor activity CueR [Escherichia coli 3.3884]
gi|386232819|gb|EII64804.1| transcriptional repressor activity CueR [Escherichia coli 2.4168]
gi|386238699|gb|EII75634.1| transcriptional repressor activity CueR [Escherichia coli 3.2303]
gi|386243700|gb|EII85433.1| transcriptional repressor activity CueR [Escherichia coli 3003]
gi|386247242|gb|EII93415.1| transcriptional repressor activity CueR [Escherichia coli
TW07793]
gi|386255462|gb|EIJ05150.1| transcriptional repressor activity CueR [Escherichia coli B41]
gi|386261677|gb|EIJ17139.1| transcriptional repressor activity CueR [Escherichia coli 900105
(10e)]
gi|386795122|gb|AFJ28156.1| cold shock protein CspG [Escherichia coli Xuzhou21]
gi|388336359|gb|EIL02904.1| cold shock protein CspG [Escherichia coli O103:H2 str. CVM9450]
gi|388338896|gb|EIL05307.1| cold shock protein CspG [Escherichia coli O103:H25 str. CVM9340]
gi|388348785|gb|EIL14355.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9545]
gi|388352396|gb|EIL17513.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9534]
gi|388355417|gb|EIL20253.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9574]
gi|388356305|gb|EIL21065.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9570]
gi|388367946|gb|EIL31602.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM9942]
gi|388370935|gb|EIL34429.1| hypothetical protein ECO10026_28212 [Escherichia coli O26:H11
str. CVM10026]
gi|388385917|gb|EIL47580.1| cold shock protein CspG [Escherichia coli 541-15]
gi|388392155|gb|EIL53583.1| cold shock protein CspG [Escherichia coli KD2]
gi|388392855|gb|EIL54258.1| cold shock protein CspG [Escherichia coli KD1]
gi|388402074|gb|EIL62668.1| cold shock protein CspG [Escherichia coli 75]
gi|388402118|gb|EIL62710.1| cold shock protein CspG [Escherichia coli 576-1]
gi|388405291|gb|EIL65722.1| cold shock protein CspG [Escherichia coli 541-1]
gi|388413303|gb|EIL73304.1| cold shock protein CspG [Escherichia coli CUMT8]
gi|388416901|gb|EIL76774.1| cold shock protein CspG [Escherichia coli HM605]
gi|390648937|gb|EIN27563.1| putative cold-shock protein [Escherichia coli FRIK1996]
gi|390650154|gb|EIN28604.1| putative cold-shock protein [Escherichia coli FDA517]
gi|390650539|gb|EIN28945.1| putative cold-shock protein [Escherichia coli FDA505]
gi|390670666|gb|EIN47205.1| putative cold-shock protein [Escherichia coli FRIK1990]
gi|390689837|gb|EIN64749.1| putative cold-shock protein [Escherichia coli PA5]
gi|390706715|gb|EIN80228.1| putative cold-shock protein [Escherichia coli PA10]
gi|390708004|gb|EIN81302.1| putative cold-shock protein [Escherichia coli PA15]
gi|390718712|gb|EIN91458.1| putative cold-shock protein [Escherichia coli PA22]
gi|390731559|gb|EIO03429.1| putative cold-shock protein [Escherichia coli PA24]
gi|390731590|gb|EIO03459.1| putative cold-shock protein [Escherichia coli PA25]
gi|390734334|gb|EIO05871.1| putative cold-shock protein [Escherichia coli PA28]
gi|390750052|gb|EIO20205.1| putative cold-shock protein [Escherichia coli PA31]
gi|390750292|gb|EIO20395.1| putative cold-shock protein [Escherichia coli PA32]
gi|390761310|gb|EIO30605.1| putative cold-shock protein [Escherichia coli PA40]
gi|390774395|gb|EIO42623.1| putative cold-shock protein [Escherichia coli PA41]
gi|390775650|gb|EIO43687.1| putative cold-shock protein [Escherichia coli PA42]
gi|390777430|gb|EIO45263.1| putative cold-shock protein [Escherichia coli PA39]
gi|390784407|gb|EIO51976.1| putative cold-shock protein [Escherichia coli TW06591]
gi|390793658|gb|EIO60990.1| putative cold-shock protein [Escherichia coli TW10246]
gi|390800655|gb|EIO67740.1| putative cold-shock protein [Escherichia coli TW11039]
gi|390804467|gb|EIO71434.1| putative cold-shock protein [Escherichia coli TW07945]
gi|390810728|gb|EIO77471.1| putative cold-shock protein [Escherichia coli TW09109]
gi|390818350|gb|EIO84738.1| putative cold-shock protein [Escherichia coli TW10119]
gi|390819056|gb|EIO85406.1| putative cold-shock protein [Escherichia coli TW09098]
gi|390835358|gb|EIP00119.1| putative cold-shock protein [Escherichia coli EC4203]
gi|390838214|gb|EIP02523.1| putative cold-shock protein [Escherichia coli TW09195]
gi|390838427|gb|EIP02698.1| putative cold-shock protein [Escherichia coli EC4196]
gi|390856238|gb|EIP18865.1| putative cold-shock protein [Escherichia coli TW14313]
gi|390856827|gb|EIP19392.1| putative cold-shock protein [Escherichia coli EC4421]
gi|390883183|gb|EIP43635.1| putative cold-shock protein [Escherichia coli EC4402]
gi|390885760|gb|EIP45952.1| putative cold-shock protein [Escherichia coli EC4439]
gi|390889819|gb|EIP49529.1| putative cold-shock protein [Escherichia coli EC4436]
gi|390902872|gb|EIP61946.1| putative cold-shock protein [Escherichia coli EC1738]
gi|390905520|gb|EIP64462.1| putative cold-shock protein [Escherichia coli EC4437]
gi|390910989|gb|EIP69713.1| putative cold-shock protein [Escherichia coli EC1734]
gi|390923584|gb|EIP81481.1| putative cold-shock protein [Escherichia coli EC1863]
gi|391250841|gb|EIQ10061.1| cold shock-like protein CspG [Shigella flexneri CCH060]
gi|391270561|gb|EIQ29449.1| cold shock-like protein CspG [Shigella boydii 965-58]
gi|391279051|gb|EIQ37741.1| cold shock-like protein CspG [Shigella boydii 4444-74]
gi|391286772|gb|EIQ45307.1| cold shock-like protein CspG [Shigella sonnei 3226-85]
gi|391296155|gb|EIQ54263.1| cold shock protein CspG [Shigella sonnei 4822-66]
gi|391300955|gb|EIQ58858.1| cold shock-like protein CspG [Shigella dysenteriae 225-75]
gi|391308599|gb|EIQ66293.1| cold shock-like protein CspG [Escherichia coli EPECa12]
gi|391314331|gb|EIQ71887.1| cold shock protein CspG [Escherichia coli EPEC C342-62]
gi|394385292|gb|EJE62831.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM10224]
gi|394386682|gb|EJE64168.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9602]
gi|394390064|gb|EJE67123.1| cold shock protein CspG [Escherichia coli O111:H8 str. CVM9634]
gi|394397566|gb|EJE73818.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9455]
gi|394397595|gb|EJE73846.1| cold shock protein CspG [Escherichia coli O111:H11 str. CVM9553]
gi|394401591|gb|EJE77388.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM10021]
gi|394417058|gb|EJE90812.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM10030]
gi|394421556|gb|EJE95019.1| cold shock protein CspG [Escherichia coli O26:H11 str. CVM9952]
gi|397786303|gb|EJK97143.1| cold shock-like protein cspG [Escherichia coli STEC_O31]
gi|397902642|gb|EJL18955.1| cold shock protein CspG [Shigella sonnei str. Moseley]
gi|404341331|gb|EJZ67740.1| cold shock protein CspG [Shigella flexneri 1485-80]
gi|406778519|gb|AFS57943.1| cold shock protein CspG [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055102|gb|AFS75153.1| cold shock protein CspG [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064500|gb|AFS85547.1| cold shock protein CspG [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408071035|gb|EKH05389.1| putative cold-shock protein [Escherichia coli PA7]
gi|408074666|gb|EKH08927.1| putative cold-shock protein [Escherichia coli FRIK920]
gi|408084098|gb|EKH17884.1| putative cold-shock protein [Escherichia coli PA34]
gi|408092495|gb|EKH25682.1| putative cold-shock protein [Escherichia coli FDA507]
gi|408099816|gb|EKH32421.1| putative cold-shock protein [Escherichia coli FDA504]
gi|408107852|gb|EKH39920.1| putative cold-shock protein [Escherichia coli FRIK1999]
gi|408114845|gb|EKH46364.1| putative cold-shock protein [Escherichia coli FRIK1997]
gi|408127890|gb|EKH58322.1| putative cold-shock protein [Escherichia coli NE037]
gi|408129390|gb|EKH59610.1| putative cold-shock protein [Escherichia coli FRIK2001]
gi|408138275|gb|EKH67960.1| putative cold-shock protein [Escherichia coli PA4]
gi|408148571|gb|EKH77418.1| putative cold-shock protein [Escherichia coli PA23]
gi|408149228|gb|EKH77930.1| putative cold-shock protein [Escherichia coli PA49]
gi|408154999|gb|EKH83327.1| putative cold-shock protein [Escherichia coli PA45]
gi|408164760|gb|EKH92528.1| putative cold-shock protein [Escherichia coli TT12B]
gi|408169122|gb|EKH96435.1| putative cold-shock protein [Escherichia coli MA6]
gi|408170052|gb|EKH97282.1| putative cold-shock protein [Escherichia coli 5905]
gi|408185015|gb|EKI11275.1| putative cold-shock protein [Escherichia coli CB7326]
gi|408188566|gb|EKI14360.1| putative cold-shock protein [Escherichia coli 5412]
gi|408189086|gb|EKI14840.1| putative cold-shock protein [Escherichia coli EC96038]
gi|408195944|gb|EKI21252.1| putative cold-shock protein [Escherichia coli TW15901]
gi|408204769|gb|EKI29683.1| putative cold-shock protein [Escherichia coli TW00353]
gi|408217811|gb|EKI42050.1| putative cold-shock protein [Escherichia coli 3006]
gi|408220084|gb|EKI44159.1| putative cold-shock protein [Escherichia coli 07798]
gi|408229320|gb|EKI52754.1| putative cold-shock protein [Escherichia coli PA38]
gi|408230831|gb|EKI54183.1| putative cold-shock protein [Escherichia coli N1]
gi|408255817|gb|EKI77241.1| putative cold-shock protein [Escherichia coli EC1846]
gi|408266141|gb|EKI86790.1| putative cold-shock protein [Escherichia coli EC1847]
gi|408282749|gb|EKJ02030.1| putative cold-shock protein [Escherichia coli EC1850]
gi|408284502|gb|EKJ03596.1| putative cold-shock protein [Escherichia coli EC1856]
gi|408298022|gb|EKJ16006.1| putative cold-shock protein [Escherichia coli EC1862]
gi|408298713|gb|EKJ16643.1| putative cold-shock protein [Escherichia coli EC1864]
gi|408306758|gb|EKJ24122.1| putative cold-shock protein [Escherichia coli EC1865]
gi|408314399|gb|EKJ30857.1| putative cold-shock protein [Escherichia coli EC1868]
gi|408314574|gb|EKJ31012.1| putative cold-shock protein [Escherichia coli EC1866]
gi|408329529|gb|EKJ44953.1| putative cold-shock protein [Escherichia coli EC1869]
gi|408333261|gb|EKJ48229.1| putative cold-shock protein [Escherichia coli NE098]
gi|408334541|gb|EKJ49418.1| putative cold-shock protein [Escherichia coli EC1870]
gi|408349274|gb|EKJ63326.1| putative cold-shock protein [Escherichia coli FRIK523]
gi|408352327|gb|EKJ65935.1| putative cold-shock protein [Escherichia coli 0.1304]
gi|408459034|gb|EKJ82818.1| cold shock protein CspG [Escherichia coli AD30]
gi|408556611|gb|EKK33203.1| cold shock-like protein CspG [Escherichia coli 5.2239]
gi|408557074|gb|EKK33618.1| cold shock-like protein CspG [Escherichia coli 3.4870]
gi|408557335|gb|EKK33837.1| putative cold-shock protein [Escherichia coli 6.0172]
gi|408572063|gb|EKK47990.1| putative cold-shock protein [Escherichia coli 8.0566]
gi|408572678|gb|EKK48564.1| cold shock-like protein CspG [Escherichia coli 8.0569]
gi|408583460|gb|EKK58627.1| cold shock-like protein CspG [Escherichia coli 8.0586]
gi|408586961|gb|EKK61654.1| cold shock-like protein CspG [Escherichia coli 8.2524]
gi|408587801|gb|EKK62430.1| putative cold-shock protein [Escherichia coli 10.0833]
gi|408601858|gb|EKK75631.1| cold shock-like protein CspG [Escherichia coli 10.0869]
gi|408604821|gb|EKK78379.1| putative cold-shock protein [Escherichia coli 8.0416]
gi|408615841|gb|EKK89014.1| cold shock-like protein CspG [Escherichia coli 10.0821]
gi|412962327|emb|CCK46241.1| homolog of Salmonella cold shock protein [Escherichia coli
chi7122]
gi|412968906|emb|CCJ43532.1| homolog of Salmonella cold shock protein [Escherichia coli]
gi|421937972|gb|EKT95561.1| cold shock protein CspG [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421941671|gb|EKT99057.1| cold shock protein CspG [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421943640|gb|EKU00919.1| cold shock protein CspG [Escherichia coli O111:H8 str.
CFSAN001632]
gi|427212606|gb|EKV82177.1| cold shock-like protein CspG [Escherichia coli 88.1042]
gi|427214194|gb|EKV83543.1| cold shock-like protein CspG [Escherichia coli 89.0511]
gi|427231646|gb|EKV99626.1| cold shock-like protein CspG [Escherichia coli 90.2281]
gi|427232644|gb|EKW00474.1| cold shock-like protein CspG [Escherichia coli 90.0091]
gi|427249402|gb|EKW16231.1| cold shock-like protein CspG [Escherichia coli 93.0056]
gi|427250248|gb|EKW16950.1| cold shock-like protein CspG [Escherichia coli 93.0055]
gi|427251176|gb|EKW17770.1| cold shock-like protein CspG [Escherichia coli 94.0618]
gi|427271516|gb|EKW36314.1| cold shock-like protein CspG [Escherichia coli 95.1288]
gi|427284404|gb|EKW48478.1| cold shock-like protein CspG [Escherichia coli 96.0428]
gi|427290847|gb|EKW54303.1| cold shock-like protein CspG [Escherichia coli 96.0939]
gi|427303309|gb|EKW66037.1| cold shock-like protein CspG [Escherichia coli 96.0932]
gi|427304004|gb|EKW66692.1| cold shock-like protein CspG [Escherichia coli 97.0003]
gi|427320016|gb|EKW81811.1| cold shock-like protein CspG [Escherichia coli 97.1742]
gi|427332721|gb|EKW93856.1| putative cold-shock protein [Escherichia coli 99.0678]
gi|429260545|gb|EKY44115.1| cold shock-like protein CspG [Escherichia coli 97.0010]
gi|429349546|gb|EKY86283.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02030]
gi|429350124|gb|EKY86858.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02033-1]
gi|429351214|gb|EKY87935.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02092]
gi|429365492|gb|EKZ02105.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02093]
gi|429366443|gb|EKZ03046.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02281]
gi|429369006|gb|EKZ05589.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02318]
gi|429381413|gb|EKZ17900.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-02913]
gi|429382381|gb|EKZ18846.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-03439]
gi|429383429|gb|EKZ19889.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-03943]
gi|429395647|gb|EKZ32013.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
11-04080]
gi|429396861|gb|EKZ33209.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429397739|gb|EKZ34085.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409467|gb|EKZ45697.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429417927|gb|EKZ54074.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429421596|gb|EKZ57717.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429423336|gb|EKZ59444.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429427338|gb|EKZ63423.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429434220|gb|EKZ70249.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429438207|gb|EKZ74201.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429443563|gb|EKZ79515.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429449011|gb|EKZ84914.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429455241|gb|EKZ91098.1| cold shock-like protein CspG [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430877414|gb|ELC00865.1| cold shock-like protein CspG [Escherichia coli KTE2]
gi|430879174|gb|ELC02531.1| cold shock-like protein CspG [Escherichia coli KTE4]
gi|430888257|gb|ELC10980.1| cold shock-like protein CspG [Escherichia coli KTE10]
gi|430889623|gb|ELC12284.1| cold shock-like protein CspG [Escherichia coli KTE5]
gi|430900728|gb|ELC22746.1| cold shock-like protein CspG [Escherichia coli KTE12]
gi|430909393|gb|ELC30778.1| cold shock-like protein CspG [Escherichia coli KTE16]
gi|430910659|gb|ELC31966.1| cold shock-like protein CspG [Escherichia coli KTE15]
gi|430917174|gb|ELC38222.1| cold shock-like protein CspG [Escherichia coli KTE25]
gi|430921632|gb|ELC42456.1| cold shock-like protein CspG [Escherichia coli KTE21]
gi|430927771|gb|ELC48334.1| cold shock-like protein CspG [Escherichia coli KTE26]
gi|430931940|gb|ELC52374.1| cold shock-like protein CspG [Escherichia coli KTE28]
gi|430937469|gb|ELC57724.1| cold shock-like protein CspG [Escherichia coli KTE39]
gi|430942524|gb|ELC62657.1| cold shock-like protein CspG [Escherichia coli KTE44]
gi|430946708|gb|ELC66631.1| cold shock-like protein CspG [Escherichia coli KTE178]
gi|430955460|gb|ELC74243.1| cold shock-like protein CspG [Escherichia coli KTE187]
gi|430958464|gb|ELC77058.1| cold shock-like protein CspG [Escherichia coli KTE181]
gi|430965876|gb|ELC83285.1| cold shock-like protein CspG [Escherichia coli KTE188]
gi|430968419|gb|ELC85645.1| cold shock-like protein CspG [Escherichia coli KTE189]
gi|430975303|gb|ELC92205.1| cold shock-like protein CspG [Escherichia coli KTE191]
gi|430982316|gb|ELC99006.1| cold shock-like protein CspG [Escherichia coli KTE193]
gi|430984561|gb|ELD01184.1| cold shock-like protein CspG [Escherichia coli KTE201]
gi|430990660|gb|ELD07081.1| cold shock-like protein CspG [Escherichia coli KTE204]
gi|430996493|gb|ELD12777.1| cold shock-like protein CspG [Escherichia coli KTE205]
gi|430999515|gb|ELD15597.1| cold shock-like protein CspG [Escherichia coli KTE206]
gi|431008126|gb|ELD22933.1| cold shock-like protein CspG [Escherichia coli KTE208]
gi|431009373|gb|ELD23993.1| cold shock-like protein CspG [Escherichia coli KTE210]
gi|431017832|gb|ELD31287.1| cold shock-like protein CspG [Escherichia coli KTE212]
gi|431022822|gb|ELD36082.1| cold shock-like protein CspG [Escherichia coli KTE213]
gi|431027377|gb|ELD40440.1| cold shock-like protein CspG [Escherichia coli KTE214]
gi|431031244|gb|ELD44142.1| cold shock-like protein CspG [Escherichia coli KTE216]
gi|431041657|gb|ELD52157.1| cold shock-like protein CspG [Escherichia coli KTE220]
gi|431043815|gb|ELD54096.1| cold shock-like protein CspG [Escherichia coli KTE228]
gi|431044255|gb|ELD54535.1| cold shock-like protein CspG [Escherichia coli KTE224]
gi|431054367|gb|ELD63948.1| cold shock-like protein CspG [Escherichia coli KTE230]
gi|431056389|gb|ELD65900.1| cold shock-like protein CspG [Escherichia coli KTE233]
gi|431062933|gb|ELD72193.1| cold shock-like protein CspG [Escherichia coli KTE234]
gi|431072614|gb|ELD80365.1| cold shock-like protein CspG [Escherichia coli KTE235]
gi|431076619|gb|ELD84114.1| cold shock-like protein CspG [Escherichia coli KTE236]
gi|431083771|gb|ELD89943.1| cold shock-like protein CspG [Escherichia coli KTE237]
gi|431085691|gb|ELD91795.1| cold shock-like protein CspG [Escherichia coli KTE47]
gi|431093561|gb|ELD99226.1| cold shock-like protein CspG [Escherichia coli KTE49]
gi|431097548|gb|ELE02876.1| cold shock-like protein CspG [Escherichia coli KTE51]
gi|431102126|gb|ELE07031.1| cold shock-like protein CspG [Escherichia coli KTE53]
gi|431107680|gb|ELE11845.1| cold shock-like protein CspG [Escherichia coli KTE56]
gi|431110163|gb|ELE14090.1| cold shock-like protein CspG [Escherichia coli KTE55]
gi|431120045|gb|ELE23044.1| cold shock-like protein CspG [Escherichia coli KTE57]
gi|431122952|gb|ELE25704.1| cold shock-like protein CspG [Escherichia coli KTE58]
gi|431131938|gb|ELE33954.1| cold shock-like protein CspG [Escherichia coli KTE60]
gi|431132641|gb|ELE34640.1| cold shock-like protein CspG [Escherichia coli KTE62]
gi|431140241|gb|ELE42018.1| cold shock-like protein CspG [Escherichia coli KTE67]
gi|431142459|gb|ELE44207.1| cold shock-like protein CspG [Escherichia coli KTE66]
gi|431150988|gb|ELE52030.1| cold shock-like protein CspG [Escherichia coli KTE72]
gi|431155852|gb|ELE56593.1| cold shock-like protein CspG [Escherichia coli KTE75]
gi|431161585|gb|ELE62056.1| cold shock-like protein CspG [Escherichia coli KTE76]
gi|431164541|gb|ELE64932.1| cold shock-like protein CspG [Escherichia coli KTE77]
gi|431173156|gb|ELE73237.1| cold shock-like protein CspG [Escherichia coli KTE81]
gi|431173633|gb|ELE73709.1| cold shock-like protein CspG [Escherichia coli KTE80]
gi|431182635|gb|ELE82452.1| cold shock-like protein CspG [Escherichia coli KTE86]
gi|431184060|gb|ELE83826.1| cold shock-like protein CspG [Escherichia coli KTE83]
gi|431192987|gb|ELE92331.1| cold shock-like protein CspG [Escherichia coli KTE87]
gi|431193853|gb|ELE93127.1| cold shock-like protein CspG [Escherichia coli KTE93]
gi|431202088|gb|ELF00784.1| cold shock-like protein CspG [Escherichia coli KTE111]
gi|431202904|gb|ELF01581.1| cold shock-like protein CspG [Escherichia coli KTE116]
gi|431212463|gb|ELF10390.1| cold shock-like protein CspG [Escherichia coli KTE119]
gi|431216785|gb|ELF14378.1| cold shock-like protein CspG [Escherichia coli KTE142]
gi|431223665|gb|ELF20911.1| cold shock-like protein CspG [Escherichia coli KTE143]
gi|431223960|gb|ELF21204.1| cold shock-like protein CspG [Escherichia coli KTE156]
gi|431229300|gb|ELF25952.1| cold shock-like protein CspG [Escherichia coli KTE161]
gi|431236388|gb|ELF31601.1| cold shock-like protein CspG [Escherichia coli KTE162]
gi|431246124|gb|ELF40402.1| cold shock-like protein CspG [Escherichia coli KTE171]
gi|431246468|gb|ELF40734.1| cold shock-like protein CspG [Escherichia coli KTE169]
gi|431250466|gb|ELF44525.1| cold shock-like protein CspG [Escherichia coli KTE6]
gi|431258760|gb|ELF51523.1| cold shock-like protein CspG [Escherichia coli KTE8]
gi|431265132|gb|ELF56829.1| cold shock-like protein CspG [Escherichia coli KTE9]
gi|431267558|gb|ELF59075.1| cold shock-like protein CspG [Escherichia coli KTE17]
gi|431274857|gb|ELF65902.1| cold shock-like protein CspG [Escherichia coli KTE18]
gi|431277941|gb|ELF68945.1| cold shock-like protein CspG [Escherichia coli KTE45]
gi|431285346|gb|ELF76182.1| cold shock-like protein CspG [Escherichia coli KTE23]
gi|431286028|gb|ELF76863.1| cold shock-like protein CspG [Escherichia coli KTE42]
gi|431294422|gb|ELF84602.1| cold shock-like protein CspG [Escherichia coli KTE43]
gi|431298760|gb|ELF88384.1| cold shock-like protein CspG [Escherichia coli KTE29]
gi|431304965|gb|ELF93489.1| cold shock-like protein CspG [Escherichia coli KTE22]
gi|431310703|gb|ELF98884.1| cold shock-like protein CspG [Escherichia coli KTE46]
gi|431312456|gb|ELG00455.1| cold shock-like protein CspG [Escherichia coli KTE48]
gi|431330058|gb|ELG17343.1| cold shock-like protein CspG [Escherichia coli KTE59]
gi|431331254|gb|ELG18517.1| cold shock-like protein CspG [Escherichia coli KTE63]
gi|431340704|gb|ELG27725.1| cold shock-like protein CspG [Escherichia coli KTE65]
gi|431341294|gb|ELG28307.1| cold shock-like protein CspG [Escherichia coli KTE78]
gi|431344306|gb|ELG31244.1| cold shock-like protein CspG [Escherichia coli KTE79]
gi|431350249|gb|ELG37067.1| cold shock-like protein CspG [Escherichia coli KTE84]
gi|431356300|gb|ELG42991.1| cold shock-like protein CspG [Escherichia coli KTE101]
gi|431356726|gb|ELG43416.1| cold shock-like protein CspG [Escherichia coli KTE91]
gi|431370490|gb|ELG56291.1| cold shock-like protein CspG [Escherichia coli KTE118]
gi|431374249|gb|ELG59844.1| cold shock-like protein CspG [Escherichia coli KTE123]
gi|431379311|gb|ELG64245.1| cold shock-like protein CspG [Escherichia coli KTE135]
gi|431386949|gb|ELG70902.1| cold shock-like protein CspG [Escherichia coli KTE136]
gi|431391107|gb|ELG74755.1| cold shock-like protein CspG [Escherichia coli KTE140]
gi|431396811|gb|ELG80278.1| cold shock-like protein CspG [Escherichia coli KTE141]
gi|431401438|gb|ELG84782.1| cold shock-like protein CspG [Escherichia coli KTE144]
gi|431404144|gb|ELG87402.1| cold shock-like protein CspG [Escherichia coli KTE147]
gi|431406797|gb|ELG90016.1| cold shock-like protein CspG [Escherichia coli KTE146]
gi|431412952|gb|ELG95751.1| cold shock-like protein CspG [Escherichia coli KTE154]
gi|431418513|gb|ELH00908.1| cold shock-like protein CspG [Escherichia coli KTE158]
gi|431424686|gb|ELH06782.1| cold shock-like protein CspG [Escherichia coli KTE165]
gi|431428628|gb|ELH10569.1| cold shock-like protein CspG [Escherichia coli KTE192]
gi|431435397|gb|ELH17008.1| cold shock-like protein CspG [Escherichia coli KTE194]
gi|431443250|gb|ELH24327.1| cold shock-like protein CspG [Escherichia coli KTE190]
gi|431446373|gb|ELH27122.1| cold shock-like protein CspG [Escherichia coli KTE173]
gi|431448203|gb|ELH28921.1| cold shock-like protein CspG [Escherichia coli KTE175]
gi|431452452|gb|ELH32897.1| cold shock-like protein CspG [Escherichia coli KTE183]
gi|431455195|gb|ELH35551.1| cold shock-like protein CspG [Escherichia coli KTE184]
gi|431461668|gb|ELH41935.1| cold shock-like protein CspG [Escherichia coli KTE196]
gi|431469585|gb|ELH49514.1| cold shock-like protein CspG [Escherichia coli KTE197]
gi|431473058|gb|ELH52892.1| cold shock-like protein CspG [Escherichia coli KTE203]
gi|431481139|gb|ELH60853.1| cold shock-like protein CspG [Escherichia coli KTE209]
gi|431485392|gb|ELH65054.1| cold shock-like protein CspG [Escherichia coli KTE207]
gi|431493338|gb|ELH72932.1| cold shock-like protein CspG [Escherichia coli KTE211]
gi|431496943|gb|ELH76521.1| cold shock-like protein CspG [Escherichia coli KTE217]
gi|431504609|gb|ELH83234.1| cold shock-like protein CspG [Escherichia coli KTE215]
gi|431508913|gb|ELH87184.1| cold shock-like protein CspG [Escherichia coli KTE218]
gi|431513458|gb|ELH91541.1| cold shock-like protein CspG [Escherichia coli KTE223]
gi|431517763|gb|ELH95285.1| cold shock-like protein CspG [Escherichia coli KTE227]
gi|431518312|gb|ELH95832.1| cold shock-like protein CspG [Escherichia coli KTE229]
gi|431534323|gb|ELI10807.1| cold shock-like protein CspG [Escherichia coli KTE104]
gi|431535521|gb|ELI11862.1| cold shock-like protein CspG [Escherichia coli KTE105]
gi|431539566|gb|ELI15317.1| cold shock-like protein CspG [Escherichia coli KTE106]
gi|431544995|gb|ELI19805.1| cold shock-like protein CspG [Escherichia coli KTE109]
gi|431554186|gb|ELI28068.1| cold shock-like protein CspG [Escherichia coli KTE113]
gi|431558252|gb|ELI31877.1| cold shock-like protein CspG [Escherichia coli KTE112]
gi|431559276|gb|ELI32847.1| cold shock-like protein CspG [Escherichia coli KTE117]
gi|431570485|gb|ELI43397.1| cold shock-like protein CspG [Escherichia coli KTE120]
gi|431573383|gb|ELI46188.1| cold shock-like protein CspG [Escherichia coli KTE124]
gi|431574671|gb|ELI47438.1| cold shock-like protein CspG [Escherichia coli KTE122]
gi|431589184|gb|ELI60400.1| cold shock-like protein CspG [Escherichia coli KTE128]
gi|431591885|gb|ELI62794.1| cold shock-like protein CspG [Escherichia coli KTE129]
gi|431600089|gb|ELI69766.1| cold shock-like protein CspG [Escherichia coli KTE131]
gi|431605736|gb|ELI75125.1| cold shock-like protein CspG [Escherichia coli KTE133]
gi|431608957|gb|ELI78294.1| cold shock-like protein CspG [Escherichia coli KTE137]
gi|431613281|gb|ELI82481.1| cold shock-like protein CspG [Escherichia coli KTE138]
gi|431618818|gb|ELI87752.1| cold shock-like protein CspG [Escherichia coli KTE139]
gi|431621942|gb|ELI90732.1| cold shock-like protein CspG [Escherichia coli KTE145]
gi|431630263|gb|ELI98601.1| cold shock-like protein CspG [Escherichia coli KTE150]
gi|431633132|gb|ELJ01414.1| cold shock-like protein CspG [Escherichia coli KTE148]
gi|431636289|gb|ELJ04447.1| cold shock-like protein CspG [Escherichia coli KTE153]
gi|431647840|gb|ELJ15245.1| cold shock-like protein CspG [Escherichia coli KTE157]
gi|431648973|gb|ELJ16340.1| cold shock-like protein CspG [Escherichia coli KTE160]
gi|431650625|gb|ELJ17943.1| cold shock-like protein CspG [Escherichia coli KTE163]
gi|431660851|gb|ELJ27709.1| cold shock-like protein CspG [Escherichia coli KTE166]
gi|431664060|gb|ELJ30802.1| cold shock-like protein CspG [Escherichia coli KTE167]
gi|431664956|gb|ELJ31684.1| cold shock-like protein CspG [Escherichia coli KTE168]
gi|431676087|gb|ELJ42211.1| cold shock-like protein CspG [Escherichia coli KTE174]
gi|431677742|gb|ELJ43816.1| cold shock-like protein CspG [Escherichia coli KTE176]
gi|431680836|gb|ELJ46653.1| cold shock-like protein CspG [Escherichia coli KTE177]
gi|431691482|gb|ELJ56942.1| cold shock-like protein CspG [Escherichia coli KTE179]
gi|431692794|gb|ELJ58218.1| cold shock-like protein CspG [Escherichia coli KTE180]
gi|431695531|gb|ELJ60838.1| cold shock-like protein CspG [Escherichia coli KTE232]
gi|431708761|gb|ELJ73269.1| cold shock-like protein CspG [Escherichia coli KTE88]
gi|431708846|gb|ELJ73350.1| cold shock-like protein CspG [Escherichia coli KTE82]
gi|431710937|gb|ELJ75302.1| cold shock-like protein CspG [Escherichia coli KTE85]
gi|431719864|gb|ELJ83914.1| cold shock-like protein CspG [Escherichia coli KTE90]
gi|431724653|gb|ELJ88570.1| cold shock-like protein CspG [Escherichia coli KTE94]
gi|431724912|gb|ELJ88826.1| cold shock-like protein CspG [Escherichia coli KTE95]
gi|431732305|gb|ELJ95761.1| cold shock-like protein CspG [Escherichia coli KTE97]
gi|431735785|gb|ELJ99131.1| cold shock-like protein CspG [Escherichia coli KTE99]
gi|432349109|gb|ELL43539.1| cold shock protein CspG [Escherichia coli J96]
gi|441604612|emb|CCP98358.1| Cold shock protein CspG [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441651358|emb|CCQ03060.1| Cold shock protein CspG [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441712601|emb|CCQ07302.1| Cold shock protein CspG [Escherichia coli Nissle 1917]
gi|443421614|gb|AGC86518.1| cold shock protein CspG [Escherichia coli APEC O78]
gi|444541534|gb|ELV21018.1| cold shock-like protein CspG [Escherichia coli 99.0814]
gi|444548332|gb|ELV26795.1| cold shock-like protein CspG [Escherichia coli 09BKT078844]
gi|444550786|gb|ELV28809.1| cold shock-like protein CspG [Escherichia coli 99.0815]
gi|444563532|gb|ELV40527.1| cold shock-like protein CspG [Escherichia coli 99.0839]
gi|444565499|gb|ELV42368.1| cold shock-like protein CspG [Escherichia coli 99.0816]
gi|444569364|gb|ELV45961.1| cold shock-like protein CspG [Escherichia coli 99.0848]
gi|444580544|gb|ELV56459.1| cold shock-like protein CspG [Escherichia coli 99.1753]
gi|444583447|gb|ELV59163.1| cold shock-like protein CspG [Escherichia coli 99.1775]
gi|444584674|gb|ELV60295.1| cold shock-like protein CspG [Escherichia coli 99.1793]
gi|444597833|gb|ELV72790.1| cold shock-like protein CspG [Escherichia coli ATCC 700728]
gi|444598309|gb|ELV73240.1| cold shock-like protein CspG [Escherichia coli PA11]
gi|444605809|gb|ELV80441.1| cold shock-like protein CspG [Escherichia coli 99.1805]
gi|444612326|gb|ELV86621.1| cold shock-like protein CspG [Escherichia coli PA19]
gi|444612763|gb|ELV87045.1| cold shock-like protein CspG [Escherichia coli PA13]
gi|444620407|gb|ELV94411.1| cold shock-like protein CspG [Escherichia coli PA2]
gi|444630664|gb|ELW04303.1| cold shock-like protein CspG [Escherichia coli PA47]
gi|444630815|gb|ELW04450.1| cold shock-like protein CspG [Escherichia coli PA48]
gi|444646064|gb|ELW19099.1| cold shock-like protein CspG [Escherichia coli 7.1982]
gi|444661106|gb|ELW33437.1| cold shock-like protein CspG [Escherichia coli PA35]
gi|444665407|gb|ELW37533.1| cold shock-like protein CspG [Escherichia coli 3.4880]
gi|444671407|gb|ELW43232.1| cold shock-like protein CspG [Escherichia coli 95.0083]
gi|444673494|gb|ELW45123.1| cold shock-like protein CspG [Escherichia coli 99.0670]
gi|449321120|gb|EMD11136.1| cold shock protein CspG [Escherichia coli O08]
gi|449323745|gb|EMD13694.1| cold shock protein CspG [Escherichia coli SEPT362]
gi|449323775|gb|EMD13723.1| cold shock protein CspG [Escherichia coli S17]
Length = 70
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|381399892|ref|ZP_09924909.1| Cold-shock protein DNA-binding protein [Microbacterium
laevaniformans OR221]
gi|380772855|gb|EIC06542.1| Cold-shock protein DNA-binding protein [Microbacterium
laevaniformans OR221]
Length = 68
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
++G V WF+ KG+GFI PD+GGAD+F H +I+S GYR+L ENQ VEF++
Sbjct: 3 TSGTVKWFNSEKGFGFIAPDEGGADVFAHYSAIESSGYRSLEENQRVEFEI 53
>gi|192360604|ref|YP_001983030.1| cold-shock protein CspD [Cellvibrio japonicus Ueda107]
gi|190686769|gb|ACE84447.1| cold-shock protein CspD [Cellvibrio japonicus Ueda107]
Length = 125
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
TG V WF+ AKGYGFI D+GG DLF H +I DGY+TL Q V F++ D
Sbjct: 41 IMPTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEIT-RGDKG 99
Query: 65 YQALDVTAP 73
A+++ AP
Sbjct: 100 LHAINIVAP 108
>gi|160914188|ref|ZP_02076410.1| hypothetical protein EUBDOL_00197 [Eubacterium dolichum DSM 3991]
gi|158433999|gb|EDP12288.1| cold-shock DNA-binding domain protein [Eubacterium dolichum DSM
3991]
Length = 66
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STGKV WF+ KGYGFI D+G D+FVH SI +DG++TL E Q+V FDV +E+D Q
Sbjct: 2 STGKVKWFNAEKGYGFITTDEG-KDVFVHYSSINADGFKTLEEGQAVTFDV-VESDRGEQ 59
Query: 67 ALDVT 71
A +VT
Sbjct: 60 AANVT 64
>gi|91785349|ref|YP_560555.1| cold-shock DNA-binding protein family protein [Burkholderia
xenovorans LB400]
gi|187925500|ref|YP_001897142.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|209516559|ref|ZP_03265413.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|307731142|ref|YP_003908366.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. CCGE1003]
gi|323527488|ref|YP_004229641.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. CCGE1001]
gi|385207912|ref|ZP_10034780.1| cold shock protein [Burkholderia sp. Ch1-1]
gi|91689303|gb|ABE32503.1| cold-shock DNA-binding protein family [Burkholderia xenovorans
LB400]
gi|187716694|gb|ACD17918.1| cold-shock DNA-binding domain protein [Burkholderia phytofirmans
PsJN]
gi|209503000|gb|EEA03002.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|307585677|gb|ADN59075.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1003]
gi|323384490|gb|ADX56581.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1001]
gi|385180250|gb|EIF29526.1| cold shock protein [Burkholderia sp. Ch1-1]
Length = 67
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD GG DLF H I+++G++TL ENQ V F+V+ GK A
Sbjct: 3 TGTVKWFNDAKGFGFITPDGGGEDLFAHFSEIRTEGFKTLQENQKVTFEVKTGPKGKQAA 62
>gi|399019585|ref|ZP_10721731.1| cold shock protein [Herbaspirillum sp. CF444]
gi|398097476|gb|EJL87780.1| cold shock protein [Herbaspirillum sp. CF444]
Length = 69
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ +KG+GFI PDDGG DLF H +I+ +G++TL E Q V+F+V GK Q
Sbjct: 2 ATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFEVTQGPKGK-Q 60
Query: 67 ALDVTAPGG 75
A ++ AP
Sbjct: 61 ASNIQAPAA 69
>gi|395648625|ref|ZP_10436475.1| cold-shock DNA-binding domain protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 67
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+TGKV WF+ KG+GFI DDGGAD+FVH +I+ DG++TL E + V+FD+ DGK
Sbjct: 2 ATGKVKWFNAEKGFGFITQDDGGADVFVHFSAIQIDGFKTLEEGKKVQFDI---VDGK 56
>gi|330815856|ref|YP_004359561.1| cold-shock DNA-binding protein family protein [Burkholderia
gladioli BSR3]
gi|327368249|gb|AEA59605.1| cold-shock DNA-binding protein family protein [Burkholderia
gladioli BSR3]
Length = 67
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H IK DG++TL ENQ V FDV+ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIKMDGFKTLKENQRVSFDVKTGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|152999996|ref|YP_001365677.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS185]
gi|160874617|ref|YP_001553933.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS195]
gi|217974041|ref|YP_002358792.1| cold-shock DNA-binding domain-containing protein [Shewanella
baltica OS223]
gi|373948867|ref|ZP_09608828.1| cold-shock DNA-binding domain protein [Shewanella baltica OS183]
gi|378707869|ref|YP_005272763.1| cold-shock protein [Shewanella baltica OS678]
gi|386325292|ref|YP_006021409.1| cold-shock protein [Shewanella baltica BA175]
gi|418023491|ref|ZP_12662476.1| cold-shock DNA-binding domain protein [Shewanella baltica OS625]
gi|151364614|gb|ABS07614.1| putative cold-shock DNA-binding domain protein [Shewanella
baltica OS185]
gi|160860139|gb|ABX48673.1| cold-shock DNA-binding domain protein [Shewanella baltica OS195]
gi|217499176|gb|ACK47369.1| cold-shock DNA-binding domain protein [Shewanella baltica OS223]
gi|315266858|gb|ADT93711.1| cold-shock DNA-binding domain protein [Shewanella baltica OS678]
gi|333819437|gb|AEG12103.1| cold-shock DNA-binding domain protein [Shewanella baltica BA175]
gi|353537374|gb|EHC06931.1| cold-shock DNA-binding domain protein [Shewanella baltica OS625]
gi|373885467|gb|EHQ14359.1| cold-shock DNA-binding domain protein [Shewanella baltica OS183]
Length = 69
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
++++TG V WF+ KG+GFI PD+GGAD FVH ++I S+G++TL E Q V FD++ G
Sbjct: 1 MSKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSEGFKTLAEGQKVSFDIEQGQKG 60
Query: 64 KYQA 67
A
Sbjct: 61 PQAA 64
>gi|30062528|ref|NP_836699.1| cold shock protein CspG [Shigella flexneri 2a str. 2457T]
gi|56479790|ref|NP_706912.2| cold shock protein CspG [Shigella flexneri 2a str. 301]
gi|110805005|ref|YP_688525.1| cold shock protein CspG [Shigella flexneri 5 str. 8401]
gi|312971120|ref|ZP_07785299.1| cold shock-like protein cspG [Escherichia coli 1827-70]
gi|384542569|ref|YP_005726631.1| Cold shock-like protein cspG [Shigella flexneri 2002017]
gi|414575274|ref|ZP_11432480.1| cold shock-like protein CspG [Shigella sonnei 3233-85]
gi|415773376|ref|ZP_11485994.1| cold shock-like protein cspG [Escherichia coli 3431]
gi|415837152|ref|ZP_11519381.1| cold shock-like protein cspG [Escherichia coli RN587/1]
gi|415853925|ref|ZP_11529815.1| cold shock-like protein cspG [Shigella flexneri 2a str. 2457T]
gi|417711763|ref|ZP_12360760.1| cold shock-like protein cspG [Shigella flexneri K-272]
gi|417722135|ref|ZP_12370968.1| cold shock-like protein cspG [Shigella flexneri K-304]
gi|417727499|ref|ZP_12376235.1| cold shock-like protein cspG [Shigella flexneri K-671]
gi|417742558|ref|ZP_12391103.1| cold shock protein CspG [Shigella flexneri 2930-71]
gi|417827094|ref|ZP_12473665.1| cold shock protein CspG [Shigella flexneri J1713]
gi|420319548|ref|ZP_14821394.1| cold shock-like protein CspG [Shigella flexneri 2850-71]
gi|420340741|ref|ZP_14842256.1| cold shock-like protein CspG [Shigella flexneri K-404]
gi|424095325|ref|ZP_17831008.1| putative cold-shock protein [Escherichia coli FRIK1985]
gi|424108497|ref|ZP_17843003.1| putative cold-shock protein [Escherichia coli 93-001]
gi|424114377|ref|ZP_17848457.1| putative cold-shock protein [Escherichia coli PA3]
gi|424126768|ref|ZP_17859912.1| putative cold-shock protein [Escherichia coli PA9]
gi|424139433|ref|ZP_17871660.1| putative cold-shock protein [Escherichia coli PA14]
gi|424454427|ref|ZP_17905886.1| putative cold-shock protein [Escherichia coli PA33]
gi|424518995|ref|ZP_17963363.1| putative cold-shock protein [Escherichia coli TW14301]
gi|424531043|ref|ZP_17974615.1| putative cold-shock protein [Escherichia coli EC4422]
gi|424567931|ref|ZP_18008773.1| putative cold-shock protein [Escherichia coli EC4448]
gi|424574101|ref|ZP_18014455.1| putative cold-shock protein [Escherichia coli EC1845]
gi|424837459|ref|ZP_18262096.1| cold shock protein CspG [Shigella flexneri 5a str. M90T]
gi|425161142|ref|ZP_18560258.1| putative cold-shock protein [Escherichia coli FDA506]
gi|425277081|ref|ZP_18668385.1| putative cold-shock protein [Escherichia coli ARS4.2123]
gi|425310061|ref|ZP_18699473.1| putative cold-shock protein [Escherichia coli EC1735]
gi|425315993|ref|ZP_18705005.1| putative cold-shock protein [Escherichia coli EC1736]
gi|425322076|ref|ZP_18710681.1| putative cold-shock protein [Escherichia coli EC1737]
gi|425340876|ref|ZP_18728035.1| putative cold-shock protein [Escherichia coli EC1848]
gi|425346738|ref|ZP_18733474.1| putative cold-shock protein [Escherichia coli EC1849]
gi|425421588|ref|ZP_18802794.1| putative cold-shock protein [Escherichia coli 0.1288]
gi|428945750|ref|ZP_19018311.1| cold shock-like protein CspG [Escherichia coli 88.1467]
gi|428970264|ref|ZP_19040837.1| cold shock-like protein CspG [Escherichia coli 90.0039]
gi|429013153|ref|ZP_19080331.1| cold shock-like protein CspG [Escherichia coli 95.0943]
gi|429025071|ref|ZP_19091401.1| cold shock-like protein CspG [Escherichia coli 96.0427]
gi|429060181|ref|ZP_19124300.1| cold shock-like protein CspG [Escherichia coli 97.0007]
gi|429065820|ref|ZP_19129600.1| cold shock-like protein CspG [Escherichia coli 99.0672]
gi|429077557|ref|ZP_19140758.1| cold shock-like protein CspG [Escherichia coli 99.0713]
gi|429824902|ref|ZP_19356308.1| cold shock-like protein CspG [Escherichia coli 96.0109]
gi|445017036|ref|ZP_21333070.1| cold shock-like protein CspG [Escherichia coli PA8]
gi|445033348|ref|ZP_21348950.1| cold shock-like protein CspG [Escherichia coli 99.1762]
gi|30040774|gb|AAP16505.1| putative cold shock protein [Shigella flexneri 2a str. 2457T]
gi|56383341|gb|AAN42619.2| putative cold shock protein [Shigella flexneri 2a str. 301]
gi|110614553|gb|ABF03220.1| cold shock-like protein CspG [Shigella flexneri 5 str. 8401]
gi|281600354|gb|ADA73338.1| Cold shock-like protein cspG [Shigella flexneri 2002017]
gi|310336881|gb|EFQ02048.1| cold shock-like protein cspG [Escherichia coli 1827-70]
gi|313650757|gb|EFS15158.1| cold shock-like protein cspG [Shigella flexneri 2a str. 2457T]
gi|315619077|gb|EFU99658.1| cold shock-like protein cspG [Escherichia coli 3431]
gi|323190646|gb|EFZ75916.1| cold shock-like protein cspG [Escherichia coli RN587/1]
gi|332762777|gb|EGJ93040.1| cold shock-like protein cspG [Shigella flexneri K-671]
gi|332767786|gb|EGJ97977.1| cold shock protein CspG [Shigella flexneri 2930-71]
gi|333008663|gb|EGK28129.1| cold shock-like protein cspG [Shigella flexneri K-272]
gi|333020008|gb|EGK39279.1| cold shock-like protein cspG [Shigella flexneri K-304]
gi|335576538|gb|EGM62789.1| cold shock protein CspG [Shigella flexneri J1713]
gi|383466511|gb|EID61532.1| cold shock protein CspG [Shigella flexneri 5a str. M90T]
gi|390668152|gb|EIN45045.1| putative cold-shock protein [Escherichia coli 93-001]
gi|390671194|gb|EIN47674.1| putative cold-shock protein [Escherichia coli FRIK1985]
gi|390686818|gb|EIN62133.1| putative cold-shock protein [Escherichia coli PA3]
gi|390689685|gb|EIN64611.1| putative cold-shock protein [Escherichia coli PA9]
gi|390708862|gb|EIN82042.1| putative cold-shock protein [Escherichia coli PA14]
gi|390752648|gb|EIO22469.1| putative cold-shock protein [Escherichia coli PA33]
gi|390854079|gb|EIP17020.1| putative cold-shock protein [Escherichia coli TW14301]
gi|390869437|gb|EIP31074.1| putative cold-shock protein [Escherichia coli EC4422]
gi|390910460|gb|EIP69196.1| putative cold-shock protein [Escherichia coli EC4448]
gi|390925230|gb|EIP82952.1| putative cold-shock protein [Escherichia coli EC1845]
gi|391252756|gb|EIQ11947.1| cold shock-like protein CspG [Shigella flexneri 2850-71]
gi|391272316|gb|EIQ31171.1| cold shock-like protein CspG [Shigella flexneri K-404]
gi|391288223|gb|EIQ46732.1| cold shock-like protein CspG [Shigella sonnei 3233-85]
gi|408087119|gb|EKH20590.1| putative cold-shock protein [Escherichia coli FDA506]
gi|408205266|gb|EKI30160.1| putative cold-shock protein [Escherichia coli ARS4.2123]
gi|408235518|gb|EKI58467.1| putative cold-shock protein [Escherichia coli EC1735]
gi|408247431|gb|EKI69633.1| putative cold-shock protein [Escherichia coli EC1736]
gi|408250575|gb|EKI72417.1| putative cold-shock protein [Escherichia coli EC1737]
gi|408267489|gb|EKI87938.1| putative cold-shock protein [Escherichia coli EC1848]
gi|408276390|gb|EKI96312.1| putative cold-shock protein [Escherichia coli EC1849]
gi|408346954|gb|EKJ61199.1| putative cold-shock protein [Escherichia coli 0.1288]
gi|427214410|gb|EKV83738.1| cold shock-like protein CspG [Escherichia coli 88.1467]
gi|427232156|gb|EKW00058.1| cold shock-like protein CspG [Escherichia coli 90.0039]
gi|427268553|gb|EKW33684.1| cold shock-like protein CspG [Escherichia coli 95.0943]
gi|427288895|gb|EKW52494.1| cold shock-like protein CspG [Escherichia coli 96.0427]
gi|427320811|gb|EKW82544.1| cold shock-like protein CspG [Escherichia coli 97.0007]
gi|427332663|gb|EKW93800.1| cold shock-like protein CspG [Escherichia coli 99.0713]
gi|427334150|gb|EKW95228.1| cold shock-like protein CspG [Escherichia coli 99.0672]
gi|429258693|gb|EKY42521.1| cold shock-like protein CspG [Escherichia coli 96.0109]
gi|444635304|gb|ELW08735.1| cold shock-like protein CspG [Escherichia coli PA8]
gi|444651490|gb|ELW24292.1| cold shock-like protein CspG [Escherichia coli 99.1762]
Length = 66
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G A
Sbjct: 2 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 61
Query: 68 LDVT 71
VT
Sbjct: 62 NVVT 65
>gi|332524835|ref|ZP_08401026.1| cold-shock DNA-binding protein family protein [Rubrivivax
benzoatilyticus JA2]
gi|332108135|gb|EGJ09359.1| cold-shock DNA-binding protein family protein [Rubrivivax
benzoatilyticus JA2]
Length = 70
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 39/54 (72%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+T TG V WF+ KG+GFI PDDGG DLF H K I+ G++TL ENQ VEF+V
Sbjct: 1 MTTQTGTVKWFNEGKGFGFIAPDDGGKDLFAHFKEIQGSGFKTLVENQRVEFEV 54
>gi|229526207|ref|ZP_04415611.1| cold shock protein CspG [Vibrio cholerae bv. albensis VL426]
gi|229336365|gb|EEO01383.1| cold shock protein CspG [Vibrio cholerae bv. albensis VL426]
Length = 70
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI D+GG D+FVH KSI S+G++TL E Q V F V+ + G
Sbjct: 4 KMTGSVKWFNETKGFGFISQDNGGQDVFVHFKSIVSEGFKTLAEGQRVSFTVEQDKKGP- 62
Query: 66 QALDVTA 72
QA VTA
Sbjct: 63 QAAQVTA 69
>gi|241742586|ref|XP_002412390.1| zinc-finger protein, putative [Ixodes scapularis]
gi|215505716|gb|EEC15210.1| zinc-finger protein, putative [Ixodes scapularis]
Length = 481
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGG--GGGRCY 217
C+ C P H +DCP G S+ G CFKCG H + C R S +C+
Sbjct: 337 CFKCRQPGHRVQDCPVMLGDSD---QAVGICFKCGSTEHFSSACAVRTSASNEFPFAKCF 393
Query: 218 NCGKSGHLARDCGAGGAGG---GGSCFNCGKPGHFARECTKV 256
C + GHL+R C G GG C CG HF REC ++
Sbjct: 394 ICQQQGHLSRKCPQNEKGAYPRGGHCNFCGAVDHFKRECPEM 435
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C+ C GH ++C +S+ G C+ CG EHF+ C + SN +
Sbjct: 336 LCFKCRQPGHRVQDCPVMLGDSD--QAVGICFKCGSTEHFSSACAVRTSASNEFPF--AK 391
Query: 190 CFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARDC 229
CF C GHL+R C G GG C CG H R+C
Sbjct: 392 CFICQQQGHLSRKCPQNEKGAYPRGGHCNFCGAVDHFKREC 432
>gi|386829544|ref|ZP_10116651.1| cold shock protein [Beggiatoa alba B18LD]
gi|386430428|gb|EIJ44256.1| cold shock protein [Beggiatoa alba B18LD]
Length = 67
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
TG V WF+ +KG+GF+ PDDG D+FVH +I+S G++TL E Q+V+F+ Q+ G
Sbjct: 3 TGTVKWFNESKGFGFLAPDDGSKDVFVHFSTIQSSGFKTLKEGQAVQFEAQMGPKG 58
>gi|297182471|gb|ADI18634.1| cold shock proteins [uncultured Rhodospirillales bacterium
HF4000_24M03]
Length = 89
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
+ ++T +TG V WF+ AKG+GFI P+DG D FVH +++S G TL E Q V +++Q
Sbjct: 16 LEEITMATGTVKWFNPAKGFGFIEPEDGSNDAFVHISAVESAGLTTLNEGQKVSYELQPG 75
Query: 61 ADGKYQA--LDVT 71
+GK A L VT
Sbjct: 76 KNGKSSAENLSVT 88
>gi|134095623|ref|YP_001100698.1| RNA chaperone [Herminiimonas arsenicoxydans]
gi|152983285|ref|YP_001354206.1| cold-shock DNA-binding domain-containing protein
[Janthinobacterium sp. Marseille]
gi|329905635|ref|ZP_08274166.1| Cold shock protein CspG [Oxalobacteraceae bacterium IMCC9480]
gi|340788449|ref|YP_004753914.1| RNA chaperone, transcription antiterminator, affects expression
of rpoS and uspA [Collimonas fungivorans Ter331]
gi|133739526|emb|CAL62577.1| Cold shock-like protein CspD (CSP-D) [Herminiimonas
arsenicoxydans]
gi|151283362|gb|ABR91772.1| cold-shock DNA-binding domain protein [Janthinobacterium sp.
Marseille]
gi|327547557|gb|EGF32363.1| Cold shock protein CspG [Oxalobacteraceae bacterium IMCC9480]
gi|340553716|gb|AEK63091.1| RNA chaperone, transcription antiterminator, affects expression
of rpoS and uspA [Collimonas fungivorans Ter331]
Length = 67
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ +KG+GFI PDDGG DLF H +I+ +G++TL E Q V+F+V GK Q
Sbjct: 2 ATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFEVTQGPKGK-Q 60
Query: 67 ALDVTAP 73
A ++ AP
Sbjct: 61 ASNIQAP 67
>gi|333895268|ref|YP_004469143.1| putative cold shock-like protein cspG [Alteromonas sp. SN2]
gi|332995286|gb|AEF05341.1| putative cold shock-like protein cspG [Alteromonas sp. SN2]
Length = 69
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ TG V WF+ KGYGF+ D+GG D+FVH ++I SDGY+TL E Q VEF+V+ E
Sbjct: 1 MSKVTGTVKWFNADKGYGFLTQDNGGKDVFVHFRAIVSDGYKTLPEGQRVEFEVE-EGQK 59
Query: 64 KYQALDVTA 72
QA +V A
Sbjct: 60 GLQAANVHA 68
>gi|432814629|ref|ZP_20048419.1| cold shock-like protein CspG [Escherichia coli KTE115]
gi|431366852|gb|ELG53349.1| cold shock-like protein CspG [Escherichia coli KTE115]
Length = 70
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G A
Sbjct: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65
Query: 68 LDVT 71
VT
Sbjct: 66 NVVT 69
>gi|253989236|ref|YP_003040592.1| cold shock protein [Photorhabdus asymbiotica]
gi|253780686|emb|CAQ83848.1| cold shock protein [Photorhabdus asymbiotica]
Length = 69
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ + TG V WF+ +KG+GFI P DG D+FVH +I+SDG++TL E Q VEF++Q G
Sbjct: 1 MAKITGTVKWFNESKGFGFITPADGSKDVFVHFSAIQSDGFKTLAEGQKVEFEIQDGQKG 60
Query: 64 KYQALDVTA 72
A TA
Sbjct: 61 PSAANVTTA 69
>gi|186477475|ref|YP_001858945.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phymatum STM815]
gi|184193934|gb|ACC71899.1| cold-shock DNA-binding domain protein [Burkholderia phymatum
STM815]
Length = 67
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD GG DLF H I+ +G++TL ENQ V +DV+ GK A
Sbjct: 3 TGTVKWFNDAKGFGFITPDAGGEDLFAHFSEIRVEGFKTLQENQKVTYDVKTGPKGKQAA 62
>gi|297624311|ref|YP_003705745.1| cold-shock DNA-binding domain-containing protein [Truepera
radiovictrix DSM 17093]
gi|297165491|gb|ADI15202.1| cold-shock DNA-binding domain protein [Truepera radiovictrix DSM
17093]
Length = 79
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG+V WF KG+GFI DDGGAD+F H +I GYR+L E VEF+V+ G Q
Sbjct: 2 ATGRVKWFSNEKGFGFIEQDDGGADVFCHFSAITGSGYRSLNEGDEVEFEVEQGQKG-LQ 60
Query: 67 ALDVTAPGGAP 77
A +VT AP
Sbjct: 61 AKNVTVTNAAP 71
>gi|407982048|ref|ZP_11162733.1| putative cold shock protein A [Mycobacterium hassiacum DSM 44199]
gi|407376375|gb|EKF25306.1| putative cold shock protein A [Mycobacterium hassiacum DSM 44199]
Length = 68
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSD-GYRTLYENQSVEFDVQLEADGKY 65
+ G V WF+ KG+GFI PD GGAD+FVH I++D GYR+L E+Q V+FD++ A G
Sbjct: 2 TQGTVKWFNNDKGFGFIAPDGGGADVFVHYSEIQADGGYRSLTEDQRVQFDIEQSAKGP- 60
Query: 66 QALDVTA 72
QA+ V A
Sbjct: 61 QAVGVRA 67
>gi|429000608|ref|ZP_19069050.1| cold shock-like protein CspG [Escherichia coli 95.0183]
gi|427268720|gb|EKW33812.1| cold shock-like protein CspG [Escherichia coli 95.0183]
Length = 70
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGSA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|406028423|ref|YP_006727312.1| Cold shock protein [Mycobacterium indicus pranii MTCC 9506]
gi|405126970|gb|AFS12225.1| Cold shock protein [Mycobacterium indicus pranii MTCC 9506]
Length = 62
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 11 VTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQALDV 70
+ WF+G KG+GFI PDDG AD+FVH I+ GYR+L ENQ V+F+V A G QA V
Sbjct: 1 MKWFNGEKGFGFIAPDDGSADVFVHYSEIQGGGYRSLEENQRVQFEVGQGAKGP-QATGV 59
Query: 71 TA 72
TA
Sbjct: 60 TA 61
>gi|388468624|ref|ZP_10142834.1| putative cold shock protein [Pseudomonas synxantha BG33R]
gi|388012204|gb|EIK73391.1| putative cold shock protein [Pseudomonas synxantha BG33R]
Length = 67
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDG D+F H +I + GY++L ENQ VEFDV
Sbjct: 2 TTGTVKWFNAEKGFGFITPDDGTPDVFAHYSAIATQGYKSLDENQKVEFDV 52
>gi|218281154|ref|ZP_03487680.1| hypothetical protein EUBIFOR_00241 [Eubacterium biforme DSM 3989]
gi|218217600|gb|EEC91138.1| hypothetical protein EUBIFOR_00241 [Eubacterium biforme DSM 3989]
Length = 90
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
STGKV WF+ KGYGFI +DG D+FVH SI S+G++TL E Q+V +DV +E+D
Sbjct: 21 MSTGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDV-VESDRGQ 78
Query: 66 QALDVTAPGGA 76
QA +VT A
Sbjct: 79 QANNVTVVDTA 89
>gi|224542054|ref|ZP_03682593.1| hypothetical protein CATMIT_01228 [Catenibacterium mitsuokai DSM
15897]
gi|224524987|gb|EEF94092.1| cold shock protein CspA [Catenibacterium mitsuokai DSM 15897]
Length = 67
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TGKV WF KGYGFI + D+FVH +I +DGY+TL E Q+VEFDV +E D QA
Sbjct: 2 TGKVKWFKAEKGYGFITVEGQSKDIFVHFSAINADGYKTLEEGQTVEFDV-VEGDRGPQA 60
Query: 68 LDVT 71
+VT
Sbjct: 61 ANVT 64
>gi|302668966|ref|YP_003832791.1| cold shock domain protein CspD2 [Butyrivibrio proteoclasticus
B316]
gi|302397306|gb|ADL36209.1| cold shock domain protein CspD2 [Butyrivibrio proteoclasticus
B316]
Length = 72
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WFD KG+GFI +DG D+FVH +I SDGYR L +++ VEFDV+++ G+ A+
Sbjct: 8 GAVKWFDNYKGFGFITSEDG-EDVFVHYSAISSDGYRKLTQDEKVEFDVRIDDKGRTVAV 66
Query: 69 DV 70
+V
Sbjct: 67 NV 68
>gi|238026086|ref|YP_002910317.1| Cold shock-like protein CspD [Burkholderia glumae BGR1]
gi|330815379|ref|YP_004359084.1| Cold shock-like protein CspD [Burkholderia gladioli BSR3]
gi|237875280|gb|ACR27613.1| Cold shock-like protein CspD [Burkholderia glumae BGR1]
gi|327367772|gb|AEA59128.1| Cold shock-like protein CspD [Burkholderia gladioli BSR3]
Length = 67
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ AKG+GFI P+ GG DLF H I+ DG++TL ENQ VEF+V+ G
Sbjct: 2 ATGTVKWFNDAKGFGFITPEGGGDDLFAHFSEIRVDGFKTLQENQKVEFEVKTGPKG 58
>gi|20135600|gb|AAM09094.1| cold-shock protein CspD [Burkholderia multivorans]
Length = 68
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|332283953|ref|YP_004415864.1| cold-shock protein [Pusillimonas sp. T7-7]
gi|330427906|gb|AEC19240.1| cold-shock protein [Pusillimonas sp. T7-7]
Length = 80
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI PD+GG DLF H SI+ +G++TL E Q V F++ GK QA
Sbjct: 16 TGTVKWFNDAKGFGFITPDNGGEDLFAHFSSIQMNGFKTLKEGQKVAFEIAQGPKGK-QA 74
Query: 68 LDVTA 72
L++TA
Sbjct: 75 LNITA 79
>gi|390569161|ref|ZP_10249449.1| cold-shock protein [Burkholderia terrae BS001]
gi|390569175|ref|ZP_10249463.1| cold-shock protein [Burkholderia terrae BS001]
gi|390576903|ref|ZP_10256948.1| cold-shock protein [Burkholderia terrae BS001]
gi|420248979|ref|ZP_14752232.1| cold shock protein [Burkholderia sp. BT03]
gi|389931141|gb|EIM93224.1| cold-shock protein [Burkholderia terrae BS001]
gi|389938874|gb|EIN00715.1| cold-shock protein [Burkholderia terrae BS001]
gi|389938888|gb|EIN00729.1| cold-shock protein [Burkholderia terrae BS001]
gi|398064892|gb|EJL56562.1| cold shock protein [Burkholderia sp. BT03]
Length = 67
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDGG DLF H +K++G+++L E Q V F+V+ GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEVKAEGFKSLQEGQKVSFEVKQGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]
Length = 707
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 73/135 (54%), Gaps = 20/135 (14%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--CYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
C+ C GH++REC S G C+ CG+ H +RDCP NS N G
Sbjct: 81 CFKCGEEGHMSRECPQGGGQSFGGGGGGNRGCFKCGEEGHMSRDCP------NSVNGGGG 134
Query: 189 G-----CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS---- 239
CFKCG GH++RDC + SG GGG C+ CG+ GH+ARDC GG GGGG
Sbjct: 135 ASGGKGCFKCGEEGHMSRDCPS--SGNGGGKGCFKCGEDGHMARDCPQGGDGGGGGGGNR 192
Query: 240 -CFNCGKPGHFAREC 253
CFNCG+ GH +C
Sbjct: 193 GCFNCGEQGHNKADC 207
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDC-----ITRGSGGGGGG 214
C CG+ H A +C S + CFKCG GH++R+C + G GGGG
Sbjct: 56 CRKCGEEGHRAFEC-----TSGGGGGGNRACFKCGEEGHMSRECPQGGGQSFGGGGGGNR 110
Query: 215 RCYNCGKSGHLARDC-----GAGGAGGGGSCFNCGKPGHFAREC 253
C+ CG+ GH++RDC G GGA GG CF CG+ GH +R+C
Sbjct: 111 GCFKCGEEGHMSRDCPNSVNGGGGASGGKGCFKCGEEGHMSRDC 154
>gi|125532839|gb|EAY79404.1| hypothetical protein OsI_34532 [Oryza sativa Indica Group]
Length = 255
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 57/127 (44%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AR+C N C+ CG P H A +C ++
Sbjct: 40 LCNNCKRPGHFARDCP----------NVALCHACGLPGHIAAEC-----------SSKDL 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C NCGKSGH+AR+C A G C NC KPG
Sbjct: 79 CWNCKEPGHMANSCPNEGI-------CRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPG 131
Query: 248 HFARECT 254
H A ECT
Sbjct: 132 HLAAECT 138
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 57/149 (38%), Gaps = 45/149 (30%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+ C GH+A EC+S C+NC +P H A CP
Sbjct: 55 PNVALCHACGLPGHIAAECSSK----------DLCWNCKEPGHMANSCP----------- 93
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC-------------------GKSGHLA 226
N G C CG GH+AR+C G C NC KSGHLA
Sbjct: 94 NEGICRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECTNEKACNNCRKSGHLA 153
Query: 227 RDCGAGGAGGGGSCFNCGKPGHFARECTK 255
R+C C C GH AREC K
Sbjct: 154 RNC-----PNEPVCNLCNVSGHLARECPK 177
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 63/164 (38%), Gaps = 44/164 (26%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C NC GH+A ECT N C NC H
Sbjct: 103 KSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECT----------NEKACNNCRKSGHL 152
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
AR+CP N C C GHLAR+C + GG
Sbjct: 153 ARNCP-----------NEPVCNLCNVSGHLARECPKSDAINERGGPPPFRGGAPPPFRGG 201
Query: 216 -----CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C C + GH++RDC AG C NCG GH A EC
Sbjct: 202 YSDVVCRACNQVGHMSRDCMAGAFM---ICHNCGGRGHMAYECP 242
>gi|432769823|ref|ZP_20004175.1| cold shock-like protein CspG [Escherichia coli KTE50]
gi|432960550|ref|ZP_20150670.1| cold shock-like protein CspG [Escherichia coli KTE202]
gi|433062221|ref|ZP_20249175.1| cold shock-like protein CspG [Escherichia coli KTE125]
gi|431317280|gb|ELG05060.1| cold shock-like protein CspG [Escherichia coli KTE50]
gi|431477757|gb|ELH57519.1| cold shock-like protein CspG [Escherichia coli KTE202]
gi|431586847|gb|ELI58233.1| cold shock-like protein CspG [Escherichia coli KTE125]
Length = 70
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ +EF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKIEFSIEQGQRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|302869749|ref|YP_003838386.1| cold-shock protein [Micromonospora aurantiaca ATCC 27029]
gi|315503769|ref|YP_004082656.1| cold-shock DNA-binding domain-containing protein [Micromonospora
sp. L5]
gi|302572608|gb|ADL48810.1| Cold-shock protein DNA-binding [Micromonospora aurantiaca ATCC
27029]
gi|315410388|gb|ADU08505.1| cold-shock DNA-binding domain protein [Micromonospora sp. L5]
Length = 67
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI PDDGGAD+F H +I++ GYR+L ENQ VEF+V
Sbjct: 2 AIGTVKWFNADKGFGFITPDDGGADVFAHFSAIQTSGYRSLDENQRVEFEV 52
>gi|41406767|ref|NP_959603.1| CspA_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118467308|ref|YP_880121.1| hypothetical protein MAV_0852 [Mycobacterium avium 104]
gi|254773743|ref|ZP_05215259.1| hypothetical protein MaviaA2_03582 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|417747383|ref|ZP_12395853.1| cold shock protein [Mycobacterium avium subsp. paratuberculosis
S397]
gi|440776058|ref|ZP_20954909.1| hypothetical protein D522_03949 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395117|gb|AAS02986.1| CspA_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118168595|gb|ABK69492.1| conserved domain protein [Mycobacterium avium 104]
gi|336461101|gb|EGO39980.1| cold shock protein [Mycobacterium avium subsp. paratuberculosis
S397]
gi|436723773|gb|ELP47549.1| hypothetical protein D522_03949 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 67
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDDG DLFVH I+ GYR+L ENQ V+FDV+ A G Q
Sbjct: 2 AQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQGSGYRSLDENQRVQFDVEQGAKGP-Q 60
Query: 67 ALDVT 71
A+ V+
Sbjct: 61 AVGVS 65
>gi|225713264|gb|ACO12478.1| Zinc finger CCHC domain-containing protein 9 [Lepeophtheirus
salmonis]
Length = 394
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNS-GGCFKCGGYGHLARDCITRGSGGGG--GGRC 216
CY C P HF DCP + G + + G CFKCG H ++DC ++ G C
Sbjct: 247 CYLCRKPGHFLSDCPEAKDGKKATKVGAVGSCFKCGSMEHTSKDCESKLKGEAAYRFAVC 306
Query: 217 YNCGKSGHLARDCGAGGAG---GGGSCFNCGKPGHFAREC 253
+ C ++GHLA+ C + G GG C CG H EC
Sbjct: 307 FICSETGHLAKACPSNPKGLYPKGGGCRFCGSVEHLKSEC 346
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 106 FGGYWKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNR--RNSNYNNNSGGCYNC 163
F G K + RR +VCY C GH +C + + + G C+ C
Sbjct: 224 FQGTLK--KERRRAENDLARSKKMVCYLCRKPGHFLSDCPEAKDGKKATKVGAVGSCFKC 281
Query: 164 GDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKS 222
G EH ++DC + G +Y CF C GHLA+ C + G GG C CG
Sbjct: 282 GSMEHTSKDCESKLKGEAAY--RFAVCFICSETGHLAKACPSNPKGLYPKGGGCRFCGSV 339
Query: 223 GHLARDC 229
HL +C
Sbjct: 340 EHLKSEC 346
>gi|354492644|ref|XP_003508457.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 172
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 37/142 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGG-----------------CYNCGDPEHFARD 172
+CYNC H+A++C ++ YN GG CYN G P H ARD
Sbjct: 46 ICYNCGESDHLAKDCDLQEGDACYNCGRGGLIAKDCKEPKREREQCCCYNFGKPGHLARD 105
Query: 173 CPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAG 232
C + + C+ C +GH+ +DC + +CY CG+ GH+A +C
Sbjct: 106 CD---------HADEQKCYSCSEFGHIQKDCTSV--------KCYRCGEPGHVATNCSKT 148
Query: 233 GAGGGGSCFNCGKPGHFARECT 254
+C+ CG+ GH A+ECT
Sbjct: 149 SEV---NCYRCGESGHLAQECT 167
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 41/157 (26%)
Query: 131 CYNCDGVGHVARECTS--------NRR----NSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
C+ C GH AREC + R +++ CYNCG+ +H A+DC Q+G
Sbjct: 6 CFKCGRSGHWARECPTGGGRGHGMRSRGRGFQFVFSSLPDICYNCGESDHLAKDCDLQEG 65
Query: 179 GSNSYNNNSGG-----------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGK 221
+ YN GG C+ G GHLARDC +CY+C +
Sbjct: 66 DA-CYNCGRGGLIAKDCKEPKREREQCCCYNFGKPGHLARDC-----DHADEQKCYSCSE 119
Query: 222 SGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
GH+ +DC + C+ CG+PGH A C+K +
Sbjct: 120 FGHIQKDCTS------VKCYRCGEPGHVATNCSKTSE 150
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 18/85 (21%)
Query: 186 NSGGCFKCGGYGHLARDCIT---RGSGGGGGGR------------CYNCGKSGHLARDCG 230
+S CFKCG GH AR+C T RG G GR CYNCG+S HLA+DC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGHGMRSRGRGFQFVFSSLPDICYNCGESDHLAKDC- 60
Query: 231 AGGAGGGGSCFNCGKPGHFARECTK 255
G +C+NCG+ G A++C +
Sbjct: 61 --DLQEGDACYNCGRGGLIAKDCKE 83
>gi|262200536|ref|YP_003271744.1| cold-shock protein DNA-binding protein [Gordonia bronchialis DSM
43247]
gi|262083883|gb|ACY19851.1| Cold-shock protein DNA-binding protein [Gordonia bronchialis DSM
43247]
Length = 79
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDD GAD+FVH +I+ G+R L E Q VEFDV+ A G Q
Sbjct: 14 AQGTVKWFNGEKGFGFIAPDDQGADVFVHFSAIQGSGFRNLEEAQRVEFDVEQGAKG-LQ 72
Query: 67 ALDVT 71
A +V+
Sbjct: 73 ATNVS 77
>gi|374367675|ref|ZP_09625734.1| cold-shock DNA-binding protein family protein [Cupriavidus
basilensis OR16]
gi|373100611|gb|EHP41673.1| cold-shock DNA-binding protein family protein [Cupriavidus
basilensis OR16]
Length = 67
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI+PD GG DLF H I+SDG+++L ENQ V F+V+ G QA
Sbjct: 3 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRSDGFKSLQENQRVSFEVKNGPKG-LQA 61
Query: 68 LDVT 71
++T
Sbjct: 62 ANIT 65
>gi|68537049|ref|YP_251754.1| cold shock protein [Corynebacterium jeikeium K411]
gi|260579394|ref|ZP_05847276.1| cold shock protein [Corynebacterium jeikeium ATCC 43734]
gi|68264648|emb|CAI38136.1| putative cold shock protein [Corynebacterium jeikeium K411]
gi|258602523|gb|EEW15818.1| cold shock protein [Corynebacterium jeikeium ATCC 43734]
Length = 67
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PDDG +D+FVH I+ G+RTL ENQ VEF++ A G Q
Sbjct: 2 AQGTVKWFNAEKGFGFIAPDDGSSDVFVHYSEIQGSGFRTLEENQKVEFEIGEGAKGP-Q 60
Query: 67 ALDVTA 72
A +VTA
Sbjct: 61 AQNVTA 66
>gi|383758787|ref|YP_005437772.1| cold shock protein [Rubrivivax gelatinosus IL144]
gi|381379456|dbj|BAL96273.1| cold shock protein [Rubrivivax gelatinosus IL144]
Length = 70
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+T TG V WF+ KG+GFI PDDGG DLF H K IK G++TL ENQ VEF+V
Sbjct: 1 MTTQTGTVKWFNEGKGFGFIAPDDGGKDLFAHFKEIKGSGFKTLTENQRVEFEV 54
>gi|283784399|ref|YP_003364264.1| cold shock-like protein [Citrobacter rodentium ICC168]
gi|62126861|gb|AAX64564.1| RNA chaperone, negative regulator of cspA transcription
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|282947853|emb|CBG87413.1| cold shock-like protein [Citrobacter rodentium ICC168]
Length = 79
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G V WF+ +KG+GFI P+DG D+FVH +I+++G++TL E Q VEF++ A G
Sbjct: 11 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 70
Query: 64 KYQALDVTA 72
A +VTA
Sbjct: 71 P-SAANVTA 78
>gi|355679967|gb|AER96442.1| CCHC-type zinc finger, nucleic acid binding protein [Mustela
putorius furo]
Length = 162
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 156 NSGGCYNCGDPEHFARDCPR------------------QQGGSNSYNNNSGGCFKCGGYG 197
+S C+ CG H+AR+CP +G ++ C++CG G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 198 HLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
HLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 HLAKDCDLQEDVEA----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 113
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 32/145 (22%)
Query: 131 CYNCDGVGHVARECTS-----------------NRRNSNYNNNS--GGCYNCGDPEHFAR 171
C+ C GH AREC + + R + ++S CY CG+ H A+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGA 231
DC Q+ + C+ CG GH+A+DC + CYNCGK GHLARDC
Sbjct: 66 DCDLQE--------DVEACYNCGRGGHIAKDC--KEPKREREQCCYNCGKPGHLARDCDH 115
Query: 232 GGAGGGGSCFNCGKPGHFARECTKV 256
C++CG+ GH ++CTKV
Sbjct: 116 ADE---QKCYSCGEFGHIQKDCTKV 137
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+CY C GH+A++C + + CYNCG H A+DC +
Sbjct: 53 ICYRCGESGHLAKDC-------DLQEDVEACYNCGRGGHIAKDCKEPK------REREQC 99
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C+ CG GHLARDC +CY+CG+ GH+ +DC C+ CG+ GH
Sbjct: 100 CYNCGKPGHLARDC-----DHADEQKCYSCGEFGHIQKDCTKV------KCYGCGETGHV 148
Query: 250 ARECTKVAN 258
A C+K +
Sbjct: 149 AINCSKTSE 157
>gi|91792287|ref|YP_561938.1| cold-shock protein, DNA-binding [Shewanella denitrificans OS217]
gi|91714289|gb|ABE54215.1| cold-shock DNA-binding protein family [Shewanella denitrificans
OS217]
Length = 70
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI PD+GGAD+FVH +SI S+G++TL E Q V F+V+ G
Sbjct: 4 KTTGLVKWFNEDKGFGFITPDNGGADVFVHFRSITSEGFKTLAEGQKVSFEVEQGQKGP- 62
Query: 66 QALDVTA 72
QA +V+A
Sbjct: 63 QAANVSA 69
>gi|402567274|ref|YP_006616619.1| cold-shock protein CspD [Burkholderia cepacia GG4]
gi|402248471|gb|AFQ48925.1| cold-shock protein CspD [Burkholderia cepacia GG4]
Length = 67
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V FDV++ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFDVKVGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|427404065|ref|ZP_18894947.1| cold shock-like protein CspA [Massilia timonae CCUG 45783]
gi|425717304|gb|EKU80269.1| cold shock-like protein CspA [Massilia timonae CCUG 45783]
Length = 67
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 41/58 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+TG V WF+ +KG+GFI PD+GG DLF H +I+S G+++L ENQ V FDV GK
Sbjct: 2 ATGIVKWFNDSKGFGFITPDEGGEDLFAHFSAIQSTGFKSLQENQRVSFDVTTGPKGK 59
>gi|383788015|ref|YP_005472583.1| putative cold shock protein [Caldisericum exile AZM16c01]
gi|381363651|dbj|BAL80480.1| putative cold shock protein [Caldisericum exile AZM16c01]
Length = 69
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ R G V WF+ KG+GFI PD+G DLFVH SIK++G+R+L E VE++V+ G
Sbjct: 1 MERFKGTVKWFNAQKGFGFIVPDNGSKDLFVHYSSIKANGFRSLKEGDKVEYEVERTDKG 60
Query: 64 KYQALDVT 71
+ +A++VT
Sbjct: 61 E-KAVNVT 67
>gi|157876790|ref|XP_001686737.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
gi|68129812|emb|CAJ09118.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
Length = 135
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 35/146 (23%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+VCY C GVGH +RECTS +S C+ CG P H AR+C ++
Sbjct: 1 MVCYRCGGVGHQSRECTSA-------ADSAPCFRCGKPGHVAREC------VSTITAEEA 47
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC------------------- 229
CF C GH AR+C CYNC + GH+A +C
Sbjct: 48 PCFYCQKPGHRAREC-PEAPPKSETVICYNCSQKGHIASECTNPAHCYLCNEDGHIGRSC 106
Query: 230 --GAGGAGGGGSCFNCGKPGHFAREC 253
+ +C CG+ GH ++C
Sbjct: 107 PTAPKRSVADKTCRKCGRKGHLRKDC 132
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C++CGG GH +R+C + C+ CGK GH+AR+C + CF C KPGH
Sbjct: 3 CYRCGGVGHQSREC----TSAADSAPCFRCGKPGHVARECVSTITAEEAPCFYCQKPGHR 58
Query: 250 ARECTK 255
AREC +
Sbjct: 59 ARECPE 64
>gi|115483228|ref|NP_001065207.1| Os10g0545300 [Oryza sativa Japonica Group]
gi|13357253|gb|AAK20050.1|AC025783_10 putative zinc finger protein [Oryza sativa Japonica Group]
gi|31433361|gb|AAP54880.1| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
gi|113639816|dbj|BAF27121.1| Os10g0545300 [Oryza sativa Japonica Group]
gi|125575582|gb|EAZ16866.1| hypothetical protein OsJ_32342 [Oryza sativa Japonica Group]
gi|215694396|dbj|BAG89389.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768319|dbj|BAH00548.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 57/127 (44%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AR+C N C+ CG P H A +C ++
Sbjct: 40 LCNNCKRPGHFARDCP----------NVALCHACGLPGHIAAEC-----------SSKDL 78
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C NCGKSGH+AR+C A G C NC KPG
Sbjct: 79 CWNCKEPGHMANSCPNEGI-------CRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPG 131
Query: 248 HFARECT 254
H A ECT
Sbjct: 132 HLAAECT 138
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 57/149 (38%), Gaps = 45/149 (30%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+ C GH+A EC+S C+NC +P H A CP
Sbjct: 55 PNVALCHACGLPGHIAAECSSK----------DLCWNCKEPGHMANSCP----------- 93
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC-------------------GKSGHLA 226
N G C CG GH+AR+C G C NC KSGHLA
Sbjct: 94 NEGICRNCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECTNEKACNNCRKSGHLA 153
Query: 227 RDCGAGGAGGGGSCFNCGKPGHFARECTK 255
R+C C C GH AREC K
Sbjct: 154 RNC-----PNEPVCNLCNVSGHLARECPK 177
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C NC GH+A ECT N C NC H
Sbjct: 103 KSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECT----------NEKACNNCRKSGHL 152
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-----------CYN 218
AR+CP N C C GHLAR+C + GG C
Sbjct: 153 ARNCP-----------NEPVCNLCNVSGHLARECPKSDAINERGGPPPFRGGYSDVVCRA 201
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C + GH++RDC AG C NCG GH A EC
Sbjct: 202 CNQVGHMSRDCMAGAFM---ICHNCGGRGHMAYECP 234
>gi|423692766|ref|ZP_17667286.1| cold-shock protein CspA [Pseudomonas fluorescens SS101]
gi|388001790|gb|EIK63119.1| cold-shock protein CspA [Pseudomonas fluorescens SS101]
Length = 67
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+ G V WF+ KGYGFI PDDG AD+F H +I+++GY++L ENQ VEF++ G+
Sbjct: 2 AMGTVKWFNADKGYGFITPDDGSADVFAHHSAIQTNGYKSLDENQKVEFEITQGPKGR 59
>gi|319949463|ref|ZP_08023522.1| cold-shock DNA-binding domain protein [Dietzia cinnamea P4]
gi|319436867|gb|EFV91928.1| cold-shock DNA-binding domain protein [Dietzia cinnamea P4]
Length = 67
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KG+GFI PDDG AD+F H +I+ GYR+L ENQ V FDV A G Q
Sbjct: 2 ATGTVKWFNADKGFGFIAPDDGSADVFAHFSAIQGSGYRSLEENQQVSFDVAQGAKG-LQ 60
Query: 67 ALDVT 71
A ++T
Sbjct: 61 AENIT 65
>gi|114330329|ref|YP_746551.1| cold-shock DNA-binding domain-containing protein [Nitrosomonas
eutropha C91]
gi|114307343|gb|ABI58586.1| cold shock protein E (CspE) [Nitrosomonas eutropha C91]
Length = 67
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDG DLF H +I +G++TL E Q V FDV GK Q
Sbjct: 2 TTGIVKWFNDAKGFGFITPDDGSEDLFAHFSAISMNGFKTLREGQRVSFDVTQGQKGK-Q 60
Query: 67 ALDVTAP 73
A ++ AP
Sbjct: 61 ASNIQAP 67
>gi|336326562|ref|YP_004606528.1| cold shock protein A [Corynebacterium resistens DSM 45100]
gi|336102544|gb|AEI10364.1| cold shock protein A [Corynebacterium resistens DSM 45100]
Length = 67
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI P+DG AD+FVH I+ +G+RTL ENQ VEF++ A G Q
Sbjct: 2 AQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGNGFRTLEENQKVEFEIGEGAKGP-Q 60
Query: 67 ALDVTA 72
A +VTA
Sbjct: 61 AQNVTA 66
>gi|256375184|ref|YP_003098844.1| cold-shock DNA-binding domain-containing protein [Actinosynnema
mirum DSM 43827]
gi|255919487|gb|ACU34998.1| cold-shock DNA-binding domain protein [Actinosynnema mirum DSM
43827]
Length = 68
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
G V WF+ KG+GFI PD+GGAD+FVH I+ +GYRTL ENQ VEF++
Sbjct: 5 GTVKWFNAEKGFGFISPDNGGADVFVHYSEIQVNGYRTLEENQRVEFEI 53
>gi|90021330|ref|YP_527157.1| cold-shock DNA-binding protein family protein [Saccharophagus
degradans 2-40]
gi|89950930|gb|ABD80945.1| cold-shock DNA-binding protein family [Saccharophagus degradans
2-40]
Length = 89
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
TG V WF+ AKG+GFI PD GG DLF H SI+ +GYRTL Q V F+++
Sbjct: 1 MPTGTVKWFNNAKGFGFILPDAGGEDLFAHYSSIEMEGYRTLKAGQPVTFEIE 53
>gi|407044490|gb|EKE42624.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 389
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C CG+ H ++DCP+ + N S CF CG GH+++DC +C+ C
Sbjct: 269 CIICGEIGHTSKDCPQNE------NKGSDCCFICGETGHISKDC------PNAERKCFVC 316
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GK+GH +RDC G CF CG+ GH R+C
Sbjct: 317 GKTGHKSRDC-PKAKGNNRPCFICGEIGHLDRDC 349
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C C +GH +++C N N S C+ CG+ H ++DCP N C
Sbjct: 269 CIICGEIGHTSKDCPQNE-----NKGSDCCFICGETGHISKDCP----------NAERKC 313
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
F CG GH +RDC G C+ CG+ GHL RDC
Sbjct: 314 FVCGKTGHKSRDC---PKAKGNNRPCFICGEIGHLDRDC 349
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C CG GH ++DC + G C+ CG++GH+++DC CF CGK GH
Sbjct: 269 CIICGEIGHTSKDCPQNENKGSDC--CFICGETGHISKDC----PNAERKCFVCGKTGHK 322
Query: 250 ARECTK 255
+R+C K
Sbjct: 323 SRDCPK 328
>gi|300716061|ref|YP_003740864.1| cold-shock protein [Erwinia billingiae Eb661]
gi|299061897|emb|CAX59013.1| Cold-shock DNA-binding protein [Erwinia billingiae Eb661]
Length = 75
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P GG D+F H +IK DGYRTL Q V+FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPVSGGEDIFAHYSTIKMDGYRTLKAGQQVQFDVHEGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|253990644|ref|YP_003042000.1| cold shock-like protein cspe [Photorhabdus asymbiotica]
gi|253782094|emb|CAQ85258.1| cold shock-like protein cspe [Photorhabdus asymbiotica]
Length = 79
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G V WF+ +KG+GFI P+DG D+FVH +I+S+G++TL E Q VEF++ A G
Sbjct: 11 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQKVEFEITDGAKG 70
Query: 64 KYQALDVTA 72
A++V A
Sbjct: 71 P-SAVNVVA 78
>gi|33596619|ref|NP_884262.1| cold shock-like protein [Bordetella parapertussis 12822]
gi|33601234|ref|NP_888794.1| cold shock-like protein [Bordetella bronchiseptica RB50]
gi|410420629|ref|YP_006901078.1| cold shock-like protein [Bordetella bronchiseptica MO149]
gi|410472784|ref|YP_006896065.1| cold shock-like protein [Bordetella parapertussis Bpp5]
gi|412337417|ref|YP_006966172.1| cold shock-like protein [Bordetella bronchiseptica 253]
gi|427815122|ref|ZP_18982186.1| cold shock-like protein [Bordetella bronchiseptica 1289]
gi|427819404|ref|ZP_18986467.1| cold shock-like protein [Bordetella bronchiseptica D445]
gi|427821905|ref|ZP_18988967.1| cold shock-like protein [Bordetella bronchiseptica Bbr77]
gi|33573320|emb|CAE37303.1| cold shock-like protein [Bordetella parapertussis]
gi|33575669|emb|CAE32747.1| cold shock-like protein [Bordetella bronchiseptica RB50]
gi|408442894|emb|CCJ49461.1| cold shock-like protein [Bordetella parapertussis Bpp5]
gi|408447924|emb|CCJ59601.1| cold shock-like protein [Bordetella bronchiseptica MO149]
gi|408767251|emb|CCJ51997.1| cold shock-like protein [Bordetella bronchiseptica 253]
gi|410566122|emb|CCN23682.1| cold shock-like protein [Bordetella bronchiseptica 1289]
gi|410570404|emb|CCN18577.1| cold shock-like protein [Bordetella bronchiseptica D445]
gi|410587170|emb|CCN02203.1| cold shock-like protein [Bordetella bronchiseptica Bbr77]
Length = 68
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI PDDG DLF H I+S+GY++L ENQ V F+V
Sbjct: 2 ATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEIRSEGYKSLQENQRVSFEV 52
>gi|294636901|ref|ZP_06715229.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
gi|291089892|gb|EFE22453.1| conserved domain protein [Edwardsiella tarda ATCC 23685]
Length = 81
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
Q+++ TG+V WF+ +KG+GFI DGG D+FVH +I DG++TL E Q VE+ +Q
Sbjct: 12 QMSKKTGQVKWFNESKGFGFIEQHDGGKDVFVHFSAITGDGFKTLAEGQRVEYTIQ 67
>gi|91777186|ref|YP_552394.1| cold-shock DNA-binding protein family protein [Burkholderia
xenovorans LB400]
gi|91689846|gb|ABE33044.1| cold-shock DNA-binding protein family [Burkholderia xenovorans
LB400]
Length = 77
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
L +TG V WF+ AKG+GFI PDDGG DLF H ++ G+++L ENQ V F+V+ G
Sbjct: 9 LKMATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEVQGSGFKSLQENQKVTFEVKQGPKG 68
Query: 64 KYQA 67
K A
Sbjct: 69 KQAA 72
>gi|59713168|ref|YP_205944.1| cold shock protein [Vibrio fischeri ES114]
gi|197334115|ref|YP_002157348.1| cold-shock' DNA-binding domain [Vibrio fischeri MJ11]
gi|423687291|ref|ZP_17662099.1| cold-shock' DNA-binding domain protein [Vibrio fischeri SR5]
gi|59481269|gb|AAW87056.1| cold shock protein [Vibrio fischeri ES114]
gi|197315605|gb|ACH65052.1| cold-shock' DNA-binding domain, putative [Vibrio fischeri MJ11]
gi|371493550|gb|EHN69152.1| cold-shock' DNA-binding domain protein [Vibrio fischeri SR5]
Length = 69
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++STG V WF+ KG+GFI D+GGAD+FVH ++I ++G++TL E Q+V F V+ G
Sbjct: 1 MSKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIATEGFKTLKEGQAVTFTVEQGQKG 60
Query: 64 KYQALDVT 71
QA DVT
Sbjct: 61 P-QAADVT 67
>gi|353236042|emb|CCA68045.1| related to GIS2-putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway
[Piriformospora indica DSM 11827]
Length = 184
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 52/167 (31%)
Query: 129 VVC-YNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGG-------- 179
VVC YNC GH++R+CT + + CY CG H +RDCP
Sbjct: 2 VVCSYNCGQEGHISRDCTGETKAKS-------CYKCGQEGHISRDCPEAANNNSSNANGG 54
Query: 180 --SNSYNNNSGGCFKCGGYGHLARDCITRGS----------------------------- 208
S +N+S C++CG GH+AR+C + G
Sbjct: 55 GYSGGRDNSSAECYRCGQVGHIARNCPSSGGNSYGGGGRSGGGRGGYNRDRGGGGSYAAF 114
Query: 209 GGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GGG CY CG GH++RDC G C+NC GH +++C +
Sbjct: 115 GGGNQKTCYTCGGVGHISRDCSQ-----GAKCYNCSGTGHVSKDCPQ 156
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 19/74 (25%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
CY C GVGH++R+C+ + CYNC H ++DCP+ Q
Sbjct: 121 TCYTCGGVGHISRDCSQGAK----------CYNCSGTGHVSKDCPQPQ---------RKA 161
Query: 190 CFKCGGYGHLARDC 203
C+ CG GH++RDC
Sbjct: 162 CYTCGSEGHISRDC 175
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 22/127 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG- 189
CY C VGH+AR C S+ NS G R +GG SY GG
Sbjct: 67 CYRCGQVGHIARNCPSSGGNSYGGGGRSG--------GGRGGYNRDRGGGGSYAAFGGGN 118
Query: 190 ---CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKP 246
C+ CGG GH++RDC G +CYNC +GH+++DC +C+ CG
Sbjct: 119 QKTCYTCGGVGHISRDC-------SQGAKCYNCSGTGHVSKDCPQPQR---KACYTCGSE 168
Query: 247 GHFAREC 253
GH +R+C
Sbjct: 169 GHISRDC 175
>gi|134282646|ref|ZP_01769350.1| cold-shock domain family protein [Burkholderia pseudomallei 305]
gi|254204405|ref|ZP_04910758.1| cold-shock domain family protein [Burkholderia mallei JHU]
gi|134246203|gb|EBA46293.1| cold-shock domain family protein [Burkholderia pseudomallei 305]
gi|147753991|gb|EDK61055.1| cold-shock domain family protein [Burkholderia mallei JHU]
Length = 83
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
TG V WF+ KG+GFI PD GG DLF H I+S+GY+TL ENQ V F+ +
Sbjct: 19 TGTVKWFNETKGFGFITPDSGGDDLFAHFSEIRSEGYKTLAENQKVSFETK 69
>gi|374623201|ref|ZP_09695715.1| cold-shock DNA-binding domain-containing protein
[Ectothiorhodospira sp. PHS-1]
gi|373942316|gb|EHQ52861.1| cold-shock DNA-binding domain-containing protein
[Ectothiorhodospira sp. PHS-1]
Length = 68
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STG V WF+ KG+GFI P DGGAD+FVH +I SDG++TL E Q V + VQ G Q
Sbjct: 2 STGTVKWFNETKGFGFIAPADGGADVFVHYSAINSDGFKTLAEGQKVNYQVQQGPKG-LQ 60
Query: 67 ALDVT 71
A++VT
Sbjct: 61 AVNVT 65
>gi|119962819|ref|YP_946960.1| cold shock protein [Arthrobacter aurescens TC1]
gi|403526181|ref|YP_006661068.1| cold shock protein A [Arthrobacter sp. Rue61a]
gi|119949678|gb|ABM08589.1| putative cold shock protein [Arthrobacter aurescens TC1]
gi|403228608|gb|AFR28030.1| putative cold shock protein A [Arthrobacter sp. Rue61a]
Length = 67
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KG+GFI P+DG D+F H +I S GYR+L ENQ V FDV+ G Q
Sbjct: 2 ATGTVKWFNSEKGFGFISPEDGSQDVFAHYSAINSSGYRSLEENQKVSFDVEQGPKGP-Q 60
Query: 67 ALDVTA 72
A+++ A
Sbjct: 61 AVNIQA 66
>gi|366158490|ref|ZP_09458352.1| cold shock protein CspG [Escherichia sp. TW09308]
gi|432371729|ref|ZP_19614780.1| cold shock-like protein CspG [Escherichia coli KTE11]
gi|430898872|gb|ELC21003.1| cold shock-like protein CspG [Escherichia coli KTE11]
Length = 70
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56
>gi|254786018|ref|YP_003073447.1| cold shock domain-containing protein CspD [Teredinibacter
turnerae T7901]
gi|237686702|gb|ACR13966.1| cold shock domain protein CspD [Teredinibacter turnerae T7901]
Length = 95
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
TG V WF+ AKG+GFI P+ GG DLF H S++ DGYRTL Q V FD++
Sbjct: 3 TGTVKWFNNAKGFGFILPEGGGEDLFAHYSSVEMDGYRTLKAGQPVSFDIE 53
>gi|395794380|ref|ZP_10473706.1| cold-shock DNA-binding domain-containing protein [Pseudomonas sp.
Ag1]
gi|421143933|ref|ZP_15603858.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas fluorescens BBc6R8]
gi|395341498|gb|EJF73313.1| cold-shock DNA-binding domain-containing protein [Pseudomonas sp.
Ag1]
gi|404504897|gb|EKA18942.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Pseudomonas fluorescens BBc6R8]
Length = 88
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++GKV WF+ AKGYGFI DD DLF H +I+ DGY+TL Q V FD+ ++
Sbjct: 3 MASGKVKWFNNAKGYGFINEDDKTDDLFAHYSAIQMDGYKTLKAGQPVSFDI-IQGPKGL 61
Query: 66 QALDVTAPGGA 76
A++++AP A
Sbjct: 62 HAVNISAPVSA 72
>gi|220933359|ref|YP_002512258.1| cold-shock DNA-binding domain-containing protein
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219994669|gb|ACL71271.1| cold-shock DNA-binding domain protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 67
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ +KG+GFI PDDGG D+FVH +I G++TL ENQ V FDVQ G Q
Sbjct: 2 ATGTVKWFNESKGFGFITPDDGGKDVFVHFSAISGSGFKTLAENQKVSFDVQDGPKGP-Q 60
Query: 67 ALDVTA 72
A +V A
Sbjct: 61 AANVVA 66
>gi|183984791|ref|YP_001853082.1| cold shock protein a, CspA [Mycobacterium marinum M]
gi|443492885|ref|YP_007371032.1| cold shock protein a, CspA [Mycobacterium liflandii 128FXT]
gi|183178117|gb|ACC43227.1| cold shock protein a, CspA [Mycobacterium marinum M]
gi|442585382|gb|AGC64525.1| cold shock protein a, CspA [Mycobacterium liflandii 128FXT]
Length = 67
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+G KG+GFI PDDG DLFVH I+ GYR+L ENQ V+F+V+ G Q
Sbjct: 2 AQGTVKWFNGEKGFGFITPDDGTKDLFVHYSEIQGSGYRSLEENQRVQFEVEQGTKGP-Q 60
Query: 67 ALDVTA 72
A+ V+A
Sbjct: 61 AVGVSA 66
>gi|186474053|ref|YP_001861395.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phymatum STM815]
gi|184196385|gb|ACC74349.1| cold-shock DNA-binding domain protein [Burkholderia phymatum
STM815]
Length = 67
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ AKG+GFI PDDGG DLF H ++ +G+++L ENQ V+FDV+ GK
Sbjct: 2 AEGTVKWFNDAKGFGFITPDDGGDDLFAHFSEVRVNGFKSLQENQRVKFDVKQGPKGKQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|420373325|ref|ZP_14873463.1| cold shock domain protein CspD [Shigella flexneri 1235-66]
gi|391317397|gb|EIQ74707.1| cold shock domain protein CspD [Shigella flexneri 1235-66]
Length = 74
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV+FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|403169101|ref|XP_003328636.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167802|gb|EFP84217.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 227
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 65/155 (41%), Gaps = 41/155 (26%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
C+ C +GH+A +C + R CYNC H + CP + G +
Sbjct: 8 ACFKCGALGHLAEQCPAESRL---------CYNCKQSGHESASCPNPRTG----GVDGRQ 54
Query: 190 CFKCGGYGHLARDCITR--------GSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG--- 238
CF CGG+GHLA DC + G G GG +CY CG+ GH++R C G G G
Sbjct: 55 CFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGAF 114
Query: 239 -----------------SCFNCGKPGHFARECTKV 256
C+ C H+AR+C +
Sbjct: 115 QSRIGGYKPRPAPSQPVQCYKCQGMNHYARDCMAI 149
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 27/130 (20%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQG---GSNS 182
C+ C G GH+A +C S N G CY CG H +R C G G +
Sbjct: 55 CFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSC-NHSGNGVGQGA 113
Query: 183 YNNNSGG------------CFKCGGYGHLARDCITRGSGGGGGGR------CYNCGKSGH 224
+ + GG C+KC G H ARDC+ R C+NC + H
Sbjct: 114 FQSRIGGYKPRPAPSQPVQCYKCQGMNHYARDCMAIQPPPALQPRYLKTRTCFNCQQPEH 173
Query: 225 LARDCGAGGA 234
+A +C GA
Sbjct: 174 IASNCPGSGA 183
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 122 GGYGP-----GGVVCYNCDGVGHVARECTSNRRNSNYNN---NSGGCYNCGDPEHFARDC 173
GGY P V CY C G+ H AR+C + + + C+NC PEH A +C
Sbjct: 119 GGYKPRPAPSQPVQCYKCQGMNHYARDCMAIQPPPALQPRYLKTRTCFNCQQPEHIASNC 178
Query: 174 P 174
P
Sbjct: 179 P 179
>gi|293396849|ref|ZP_06641123.1| cold shock domain protein CspD [Serratia odorifera DSM 4582]
gi|291420320|gb|EFE93575.1| cold shock domain protein CspD [Serratia odorifera DSM 4582]
Length = 73
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P+ GG D+F H +IK DGYRTL Q V FDV G +
Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIKMDGYRTLKAGQQVRFDVHQGPKGNH 60
Query: 66 QALDV 70
+L V
Sbjct: 61 ASLIV 65
>gi|238026492|ref|YP_002910723.1| Cold-shock DNA-binding domain-containing protein [Burkholderia
glumae BGR1]
gi|237875686|gb|ACR28019.1| Cold-shock DNA-binding domain-containing protein [Burkholderia
glumae BGR1]
Length = 67
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H I+ DG++TL ENQ V FDV+ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIRMDGFKTLKENQRVSFDVKTGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|159476838|ref|XP_001696518.1| nucleic acid binding protein [Chlamydomonas reinhardtii]
gi|30527347|gb|AAN77901.2| putative nucleic acid binding protein [Chlamydomonas reinhardtii]
gi|158282743|gb|EDP08495.1| nucleic acid binding protein [Chlamydomonas reinhardtii]
Length = 247
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
M + R G V WF+ KG+GFI P GG DLFVHQ +I S+G+R+L E + VEF+V+
Sbjct: 1 MGEQLRQQGTVKWFNATKGFGFITPGGGGEDLFVHQTNINSEGFRSLREGEVVEFEVEAG 60
Query: 61 ADGKYQALDVTAPGGA 76
DG+ +A++VT PGGA
Sbjct: 61 PDGRSKAVNVTGPGGA 76
>gi|229366404|gb|ACQ58182.1| Cellular nucleic acid-binding protein [Anoplopoma fimbria]
Length = 170
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 35/141 (24%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNN 186
+ CY C GH+AR+C + CYNC H +RDC P+++ Y N
Sbjct: 45 LFCYRCGDQGHMARDC---------DQTEDACYNCHRSGHISRDCKEPKKEREQLCYICN 95
Query: 187 SGG-------------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGG 233
G C+ CGG+GH+ + C +CY CG GH+A C
Sbjct: 96 KAGHMARDCGHANNQKCYSCGGFGHIQKLC--------DKVKCYRCGDIGHVAVHCAKTS 147
Query: 234 AGGGGSCFNCGKPGHFARECT 254
+C+NCG GH AR+CT
Sbjct: 148 ET---NCYNCGTAGHLARDCT 165
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 152 NYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------CFKCGGYGHLARDCI 204
+ +++S CY CG H+A+ CP GS+ G C++CG GH+ARDC
Sbjct: 2 DMSSSSSECYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCD 61
Query: 205 TRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CYNC +SGH++RDC C+ C K GH AR+C
Sbjct: 62 QTEDA------CYNCHRSGHISRDCKEPKKEREQLCYICNKAGHMARDC 104
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 59/134 (44%), Gaps = 23/134 (17%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGG--------CYNCGDPEHFARDCPRQQGGSNS 182
CY C GH A+ C S+ S+ G CY CGD H ARDC
Sbjct: 10 CYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDC--------- 60
Query: 183 YNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFN 242
+ C+ C GH++RDC + CY C K+GH+ARDC G C++
Sbjct: 61 -DQTEDACYNCHRSGHISRDC--KEPKKEREQLCYICNKAGHMARDC---GHANNQKCYS 114
Query: 243 CGKPGHFARECTKV 256
CG GH + C KV
Sbjct: 115 CGGFGHIQKLCDKV 128
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 15/83 (18%)
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-----------CYNCGKSGHLARDCGAG 232
+++S C++CG GH A+ C + G G GR CY CG GH+ARDC
Sbjct: 4 SSSSSECYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCDQ- 62
Query: 233 GAGGGGSCFNCGKPGHFARECTK 255
+C+NC + GH +R+C +
Sbjct: 63 ---TEDACYNCHRSGHISRDCKE 82
>gi|15800910|ref|NP_286926.1| cold shock protein CspG [Escherichia coli O157:H7 str. EDL933]
gi|25296143|pir||E85634 homolog of Salmonella cold shock protein [imported] - Escherichia
coli (strain O157:H7, substrain EDL933)
gi|12514257|gb|AAG55537.1|AE005293_1 homolog of Salmonella cold shock protein [Escherichia coli
O157:H7 str. EDL933]
Length = 70
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|225680555|gb|EEH18839.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 242
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 35/150 (23%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEH--FARDCP-------RQQGGSN 181
CY+C G+GHV +C + R N SG CYNC H F + P R++ +
Sbjct: 62 CYHCQGLGHVQADCPTLRLNGG--ATSGRCYNCNILGHLAFTAELPIYRHARCRKRCSIS 119
Query: 182 SY------------NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGK--SGHLAR 227
+ + + C+KCGG H ARDC +CY CGK GH++R
Sbjct: 120 PWGFQLSLPWCIRRIDRTATCYKCGGPNHFARDC------QAQSMKCYACGKLMQGHISR 173
Query: 228 DCGAGGAGG----GGSCFNCGKPGHFAREC 253
DC A G G C+ C + GH +R+C
Sbjct: 174 DCTAPNGGPLSSVGKVCYKCSQAGHISRDC 203
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 36/135 (26%)
Query: 131 CYNCDGVGHVA--------RECTSNRRNS--------------NYNNNSGGCYNCGDPEH 168
CYNC+ +GH+A R +R S + + CY CG P H
Sbjct: 89 CYNCNILGHLAFTAELPIYRHARCRKRCSISPWGFQLSLPWCIRRIDRTATCYKCGGPNH 148
Query: 169 FARDCPRQQGGSNSYNNNSGGCFKCGGY--GHLARDCITR--GSGGGGGGRCYNCGKSGH 224
FARDC Q S C+ CG GH++RDC G G CY C ++GH
Sbjct: 149 FARDCQAQ----------SMKCYACGKLMQGHISRDCTAPNGGPLSSVGKVCYKCSQAGH 198
Query: 225 LARDCGAGGAGGGGS 239
++RDC S
Sbjct: 199 ISRDCPTNTTEAVAS 213
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 47/117 (40%), Gaps = 34/117 (29%)
Query: 165 DPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCIT-RGSGGGGGGRCYNCGKSG 223
P H + CPR + + C+ C G GH+ DC T R +GG GRCYNC G
Sbjct: 43 QPGHESNGCPRPR------TTETKQCYHCQGLGHVQADCPTLRLNGGATSGRCYNCNILG 96
Query: 224 HLA--------------RDCGAGGAG-------------GGGSCFNCGKPGHFAREC 253
HLA + C G +C+ CG P HFAR+C
Sbjct: 97 HLAFTAELPIYRHARCRKRCSISPWGFQLSLPWCIRRIDRTATCYKCGGPNHFARDC 153
>gi|347754650|ref|YP_004862214.1| Cold shock protein [Candidatus Chloracidobacterium thermophilum B]
gi|347587168|gb|AEP11698.1| Cold shock protein [Candidatus Chloracidobacterium thermophilum B]
Length = 135
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
++R+TGKV WF+ +KGYGFI + GG D+FVH +IK DGY++L E Q VE+++
Sbjct: 67 MSRTTGKVKWFNNSKGYGFIE-NPGGHDVFVHYSAIKEDGYKSLSEGQIVEYEI 119
>gi|284031585|ref|YP_003381516.1| cold-shock DNA-binding domain-containing protein [Kribbella
flavida DSM 17836]
gi|283810878|gb|ADB32717.1| cold-shock DNA-binding domain protein [Kribbella flavida DSM
17836]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI PDDGGAD+F H +I++ G+R+L ENQ VEF++
Sbjct: 2 AVGTVKWFNADKGFGFITPDDGGADVFAHYSAIQTSGFRSLDENQRVEFEI 52
>gi|91784982|ref|YP_560188.1| cold-shock DNA-binding protein family protein [Burkholderia
xenovorans LB400]
gi|187925141|ref|YP_001896783.1| cold-shock DNA-binding domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|209517460|ref|ZP_03266301.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|295677450|ref|YP_003605974.1| cold-shock protein [Burkholderia sp. CCGE1002]
gi|307730770|ref|YP_003907994.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. CCGE1003]
gi|323527133|ref|YP_004229286.1| cold-shock DNA-binding domain-containing protein [Burkholderia
sp. CCGE1001]
gi|385208276|ref|ZP_10035144.1| cold shock protein [Burkholderia sp. Ch1-1]
gi|91688936|gb|ABE32136.1| cold-shock DNA-binding protein family [Burkholderia xenovorans
LB400]
gi|187716335|gb|ACD17559.1| cold-shock DNA-binding domain protein [Burkholderia phytofirmans
PsJN]
gi|209502114|gb|EEA02129.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|295437293|gb|ADG16463.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1002]
gi|307585305|gb|ADN58703.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1003]
gi|323384135|gb|ADX56226.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1001]
gi|385180614|gb|EIF29890.1| cold shock protein [Burkholderia sp. Ch1-1]
Length = 68
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PD+GG DLF H +I+ +G++TL E Q V F+V GK Q
Sbjct: 2 ATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQMNGFKTLKEGQKVTFEVVQGPKGK-Q 60
Query: 67 ALDVTAPG 74
A ++ AP
Sbjct: 61 ASNIQAPA 68
>gi|26246906|ref|NP_752946.1| stationary phase/starvation inducible regulatory protein CspD
[Escherichia coli CFT073]
gi|91209916|ref|YP_539902.1| stationary phase/starvation inducible regulatory protein CspD
[Escherichia coli UTI89]
gi|110804882|ref|YP_688402.1| stationary phase/starvation inducible regulatory protein CspD
[Shigella flexneri 5 str. 8401]
gi|222155604|ref|YP_002555743.1| Cold shock-like protein cspD [Escherichia coli LF82]
gi|237707154|ref|ZP_04537635.1| stationary phase/starvation inducible regulatory protein CspD
[Escherichia sp. 3_2_53FAA]
gi|291281884|ref|YP_003498702.1| cold-shock protein [Escherichia coli O55:H7 str. CB9615]
gi|293414163|ref|ZP_06656812.1| cold shock domain-containing protein CspD [Escherichia coli B185]
gi|293433178|ref|ZP_06661606.1| cold shock domain-containing protein CspD [Escherichia coli B088]
gi|332282225|ref|ZP_08394638.1| stationary phase/starvation inducible regulatory protein CspD
[Shigella sp. D9]
gi|384542424|ref|YP_005726486.1| putative Cold shock protein [Shigella flexneri 2002017]
gi|386628422|ref|YP_006148142.1| stationary phase/starvation inducible regulatory [Escherichia
coli str. 'clone D i2']
gi|386633342|ref|YP_006153061.1| stationary phase/starvation inducible regulatory [Escherichia
coli str. 'clone D i14']
gi|424837343|ref|ZP_18261980.1| stationary phase/starvation inducible regulatory protein CspD
[Shigella flexneri 5a str. M90T]
gi|26107306|gb|AAN79489.1|AE016758_93 Cold shock-like protein cspD [Escherichia coli CFT073]
gi|91071490|gb|ABE06371.1| cold shock-like protein CspD [Escherichia coli UTI89]
gi|110614430|gb|ABF03097.1| cold shock protein [Shigella flexneri 5 str. 8401]
gi|222032609|emb|CAP75348.1| Cold shock-like protein cspD [Escherichia coli LF82]
gi|226898364|gb|EEH84623.1| stationary phase/starvation inducible regulatory protein CspD
[Escherichia sp. 3_2_53FAA]
gi|281600209|gb|ADA73193.1| putative Cold shock protein [Shigella flexneri 2002017]
gi|290761757|gb|ADD55718.1| Cold shock protein [Escherichia coli O55:H7 str. CB9615]
gi|291323997|gb|EFE63419.1| cold shock domain-containing protein CspD [Escherichia coli B088]
gi|291434221|gb|EFF07194.1| cold shock domain-containing protein CspD [Escherichia coli B185]
gi|332104577|gb|EGJ07923.1| stationary phase/starvation inducible regulatory protein CspD
[Shigella sp. D9]
gi|355419321|gb|AER83518.1| stationary phase/starvation inducible regulatory [Escherichia
coli str. 'clone D i2']
gi|355424241|gb|AER88437.1| stationary phase/starvation inducible regulatory [Escherichia
coli str. 'clone D i14']
gi|383466395|gb|EID61416.1| stationary phase/starvation inducible regulatory protein CspD
[Shigella flexneri 5a str. M90T]
Length = 84
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+ G V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV+FDV G
Sbjct: 10 SMEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 69
Query: 65 YQALDVTAPGGAPV 78
+ ++ V A V
Sbjct: 70 HASVIVPVEVEAAV 83
>gi|359419438|ref|ZP_09211394.1| cold shock protein [Gordonia araii NBRC 100433]
gi|358244633|dbj|GAB09463.1| cold shock protein [Gordonia araii NBRC 100433]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI PD+G D+FVH I+ G+RTL ENQ VEF+V
Sbjct: 2 AQGTVKWFNAEKGFGFIAPDEGNGDVFVHYSEIQGSGFRTLEENQRVEFEV 52
>gi|422022060|ref|ZP_16368569.1| cold shock protein CspE [Providencia sneebia DSM 19967]
gi|414097810|gb|EKT59463.1| cold shock protein CspE [Providencia sneebia DSM 19967]
Length = 69
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G V WF+ +KG+GFI P+DG D+FVH +I SDG++TL E Q VEF++ A G
Sbjct: 1 MSKVKGNVKWFNESKGFGFITPEDGSKDVFVHFSAITSDGFKTLAEGQKVEFEITEGAKG 60
>gi|89072407|ref|ZP_01158986.1| cold shock protein [Photobacterium sp. SKA34]
gi|90577241|ref|ZP_01233052.1| cold shock protein [Photobacterium angustum S14]
gi|89051939|gb|EAR57391.1| cold shock protein [Photobacterium sp. SKA34]
gi|90440327|gb|EAS65507.1| cold shock protein [Photobacterium angustum S14]
Length = 69
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++STG V WF+ KG+GFI D+GGAD+FVH ++I S+G++TL E Q V F+V+ G
Sbjct: 1 MSKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQKG 60
Query: 64 KYQALDVTA 72
QA +V A
Sbjct: 61 -LQAANVVA 68
>gi|238792422|ref|ZP_04636056.1| Cold shock-like protein cspD [Yersinia intermedia ATCC 29909]
gi|238728348|gb|EEQ19868.1| Cold shock-like protein cspD [Yersinia intermedia ATCC 29909]
Length = 85
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|167838062|ref|ZP_02464921.1| cold-shock domain family protein [Burkholderia thailandensis
MSMB43]
gi|424907166|ref|ZP_18330657.1| cold-shock domain family protein [Burkholderia thailandensis
MSMB43]
gi|390927523|gb|EIP84932.1| cold-shock domain family protein [Burkholderia thailandensis
MSMB43]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ G V WF+ AKG+GFI P+ GG DLF H I+ DG++TL ENQ VEF+V+ G
Sbjct: 2 AIGTVKWFNDAKGFGFITPEGGGEDLFAHFSEIRVDGFKTLQENQKVEFEVKTGPKG 58
>gi|398896643|ref|ZP_10647693.1| cold shock protein [Pseudomonas sp. GM55]
gi|398178118|gb|EJM65774.1| cold shock protein [Pseudomonas sp. GM55]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PDDGG DLFVH K+I+ DG+++L E Q V F A G Q
Sbjct: 2 TAGTVKWFNDEKGFGFITPDDGGVDLFVHFKAIQVDGFKSLKEGQKVSFRAVPGAKG-MQ 60
Query: 67 ALDVT 71
A DV+
Sbjct: 61 AEDVS 65
>gi|167563689|ref|ZP_02356605.1| cold-shock domain family protein [Burkholderia oklahomensis
EO147]
gi|167570839|ref|ZP_02363713.1| cold-shock domain family protein [Burkholderia oklahomensis
C6786]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D+GG DLF H IK DG++TL ENQ V F+V+ GK QA
Sbjct: 3 TGIVKWFNDAKGFGFITSDNGGEDLFAHFSEIKMDGFKTLKENQRVSFEVKTGPKGK-QA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 ANIQA 66
>gi|393245308|gb|EJD52819.1| hypothetical protein AURDEDRAFT_181338 [Auricularia delicata
TFB-10046 SS5]
Length = 256
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 65/167 (38%), Gaps = 14/167 (8%)
Query: 71 TAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVV 130
T P A + K +N + N +G G ++ RR V
Sbjct: 25 TEPEPAAEPAKKKQKVDNVA---KNAPKKGWGRDPTIKDQAAKSEQRRQKRAQERQSSTV 81
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNS------GGCYNCGDPEHFARDCPRQQGGSNSYN 184
C+ C G GH A++C NSN G CY CG H + C R + +
Sbjct: 82 CFACRGKGHAAKDCPDA--NSNLEGEEKPKPAMGICYRCGATNHSLKRCRRPENPDDPLP 139
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARDCG 230
CF CG GHLA C G GG C CGK+ HLARDCG
Sbjct: 140 --FATCFVCGRKGHLAGGCAKNARGVYPDGGSCVLCGKTTHLARDCG 184
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 185 NNSGGCFKCGGYGHLARDCITRGSGGGGG-------GRCYNCGKSGHLARDC----GAGG 233
+S CF C G GH A+DC S G G CY CG + H + C
Sbjct: 77 QSSTVCFACRGKGHAAKDCPDANSNLEGEEKPKPAMGICYRCGATNHSLKRCRRPENPDD 136
Query: 234 AGGGGSCFNCGKPGHFARECTK 255
+CF CG+ GH A C K
Sbjct: 137 PLPFATCFVCGRKGHLAGGCAK 158
>gi|187479893|ref|YP_787918.1| cold shock protein [Bordetella avium 197N]
gi|115424480|emb|CAJ51034.1| cold shock protein [Bordetella avium 197N]
Length = 68
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
MAQ GKV WF+ KGYGFI PD GG D+F H +I+ GYR+L E Q VEFDV+
Sbjct: 1 MAQ----KGKVKWFNADKGYGFITPDSGGTDVFAHFSAIQGRGYRSLNEGQEVEFDVK 54
>gi|30249291|ref|NP_841361.1| cold shock DNA-binding domain-containing protein [Nitrosomonas
europaea ATCC 19718]
gi|30180610|emb|CAD85223.1| Cold-shock DNA-binding domain [Nitrosomonas europaea ATCC 19718]
Length = 67
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PDDG DLF H +I +G++TL E Q V FDV GK Q
Sbjct: 2 TTGTVKWFNDAKGFGFITPDDGSEDLFAHFSAINMNGFKTLREGQKVSFDVTQGQKGK-Q 60
Query: 67 ALDVTAP 73
A ++ AP
Sbjct: 61 ASNIQAP 67
>gi|91226280|ref|ZP_01261120.1| cold shock transcriptional regulator CspA [Vibrio alginolyticus
12G01]
gi|91189291|gb|EAS75570.1| cold shock transcriptional regulator CspA [Vibrio alginolyticus
12G01]
Length = 70
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+STG V WF+ +KG+GFI PD+GG+DLFVH KSI S+G++TL E Q V F V+ G
Sbjct: 4 KSTGSVKWFNESKGFGFITPDNGGSDLFVHFKSIVSEGFKTLSEGQKVSFVVEQGNKGP- 62
Query: 66 QALDVT 71
QA +VT
Sbjct: 63 QADNVT 68
>gi|387889833|ref|YP_006320131.1| cold shock-like protein CspD [Escherichia blattae DSM 4481]
gi|414592500|ref|ZP_11442150.1| cold shock-like protein CspD [Escherichia blattae NBRC 105725]
gi|386924666|gb|AFJ47620.1| cold shock-like protein CspD [Escherichia blattae DSM 4481]
gi|403196569|dbj|GAB79802.1| cold shock-like protein CspD [Escherichia blattae NBRC 105725]
Length = 74
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q+V FDV G +
Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQTVRFDVHQGPKGNH 60
Query: 66 QALDVTAPGGAPVHSSK 82
++ V P+H+ +
Sbjct: 61 ASVIV------PIHNEE 71
>gi|50955888|ref|YP_063176.1| cold shock protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50952370|gb|AAT90071.1| cold shock protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KGYGFI PDDG D+F H + I++ G+RTL ENQ VE+++
Sbjct: 2 AIGTVKWFNAEKGYGFIAPDDGSVDVFAHFREIQTQGFRTLEENQKVEYEL 52
>gi|339998807|ref|YP_004729690.1| cold shock-like protein CspD [Salmonella bongori NCTC 12419]
gi|339512168|emb|CCC29899.1| cold shock-like protein CspD [Salmonella bongori NCTC 12419]
Length = 73
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV FDV G +
Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNH 60
Query: 66 QALDVTAPGGA 76
++ V A
Sbjct: 61 ASIIVPIEAEA 71
>gi|373487180|ref|ZP_09577849.1| Cold-shock protein DNA-binding [Holophaga foetida DSM 6591]
gi|372010062|gb|EHP10675.1| Cold-shock protein DNA-binding [Holophaga foetida DSM 6591]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KG+GFI PD+GG DLFVH +I++ G+RTL ENQ V FDV
Sbjct: 2 AQGTVKWFNAEKGFGFITPDEGGPDLFVHHSAIQTRGFRTLDENQRVTFDV 52
>gi|17532917|ref|NP_494168.1| Protein F07E5.5 [Caenorhabditis elegans]
gi|351065298|emb|CCD61275.1| Protein F07E5.5 [Caenorhabditis elegans]
Length = 384
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
C++C +P H DCP++ S+ G CFKCG H +C +G G C+
Sbjct: 229 SACFHCREPGHRLADCPKRNSSSSD-----GVCFKCGSMEHSIHECKKKGVKGFPYATCF 283
Query: 218 NCGKSGHLARDCGA---GGAGGGGSCFNCGKPGHFARECTKVA 257
C + GH++RDC G GG C CG H R+C ++A
Sbjct: 284 VCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELA 326
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 110 WKGNNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
WK ++RR G C++C GH +C +RNS+ ++ G C+ CG EH
Sbjct: 211 WK-TRETRRIGRQDQKITGSACFHCREPGHRLADCP--KRNSS--SSDGVCFKCGSMEHS 265
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGG-GGGGRCYNCGKSGHLARD 228
+C ++ Y CF C GH++RDC +G GG C CG + HL RD
Sbjct: 266 IHECKKKGVKGFPY----ATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRD 321
Query: 229 CGAGGAGGGG 238
C A G
Sbjct: 322 CPELAAQKAG 331
>gi|334563527|ref|ZP_08516518.1| putative cold shock protein [Corynebacterium bovis DSM 20582]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PDDG D+FVH I+ G+RTL ENQ VEF+V A G Q
Sbjct: 2 AQGTVKWFNAEKGFGFIAPDDGSDDVFVHYSEIQGSGFRTLEENQKVEFEVGEGAKGP-Q 60
Query: 67 ALDVTA 72
A +VTA
Sbjct: 61 AQNVTA 66
>gi|146311055|ref|YP_001176129.1| cold-shock DNA-binding protein family protein [Enterobacter sp.
638]
gi|145317931|gb|ABP60078.1| cold-shock DNA-binding protein family [Enterobacter sp. 638]
Length = 73
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQAL 68
G V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV+FDV L G + ++
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHLGPKGNHASV 63
Query: 69 DV 70
V
Sbjct: 64 IV 65
>gi|378551330|ref|ZP_09826546.1| hypothetical protein CCH26_14624 [Citricoccus sp. CH26A]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KGYGFI PDD AD+FVH +I+ G++ L E+Q VEF+ Q G
Sbjct: 2 ATGTVKWFNAEKGYGFISPDDNSADIFVHFSAIEGSGFKELQEDQKVEFEAQQGPKGMQA 61
Query: 67 A 67
A
Sbjct: 62 A 62
>gi|332671932|ref|YP_004454940.1| cold-shock DNA-binding domain-containing protein [Cellulomonas
fimi ATCC 484]
gi|332340970|gb|AEE47553.1| cold-shock DNA-binding domain protein [Cellulomonas fimi ATCC
484]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PDDGG D+F H +I S GYR+L ENQ V+FDV G Q
Sbjct: 2 AIGTVKWFNAEKGFGFIAPDDGGPDVFAHYSAIASSGYRSLEENQKVQFDVTQGPKGP-Q 60
Query: 67 ALDVT 71
A ++T
Sbjct: 61 ASNIT 65
>gi|58258751|ref|XP_566788.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106947|ref|XP_777786.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260484|gb|EAL23139.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222925|gb|AAW40969.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1641
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C CG GH+AR C G G C+ C + GH+AR+C GGG +CF CG+PGHF
Sbjct: 656 CHHCGKTGHIARMCPDTGYSGSPN-DCFRCQQPGHMAREC-PNTFGGGDACFKCGQPGHF 713
Query: 250 AREC 253
AREC
Sbjct: 714 AREC 717
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C++C GH+AR C ++ Y+ + C+ C P H AR+CP GG ++ C
Sbjct: 656 CHHCGKTGHIARMCP----DTGYSGSPNDCFRCQQPGHMARECPNTFGGGDA-------C 704
Query: 191 FKCGGYGHLARDC 203
FKCG GH AR+C
Sbjct: 705 FKCGQPGHFAREC 717
>gi|323357927|ref|YP_004224323.1| cold shock proteins [Microbacterium testaceum StLB037]
gi|323274298|dbj|BAJ74443.1| cold shock proteins [Microbacterium testaceum StLB037]
Length = 70
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WF+ KG+GFI PDDGG D+F H +I+S GYR+L ENQ VEF++ G Q
Sbjct: 5 TQGTVKWFNSEKGFGFIAPDDGGQDVFAHYSAIQSGGYRSLEENQRVEFEIAQGPKG-LQ 63
Query: 67 ALDV 70
A D+
Sbjct: 64 AEDI 67
>gi|255648279|gb|ACU24592.1| unknown [Glycine max]
Length = 254
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P +C+NC GH+A ECT+ C+NC +P H A CP
Sbjct: 59 PNVAICHNCGLPGHIASECTT----------KSLCWNCKEPGHMASSCP----------- 97
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGK 245
N G C CG GH AR+C G C NC K GH+A +C A C N K
Sbjct: 98 NEGICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKA-----CNNYRK 152
Query: 246 PGHFARECT 254
GH AR+C
Sbjct: 153 TGHLARDCP 161
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 54/127 (42%), Gaps = 30/127 (23%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG 189
+C NC GH AREC N C+NCG P H A +C
Sbjct: 44 LCKNCKRPGHYARECP----------NVAICHNCGLPGHIASEC-----------TTKSL 82
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS--CFNCGKPG 247
C+ C GH+A C G C+ CGK+GH AR+C A G C NC K G
Sbjct: 83 CWNCKEPGHMASSCPNEGI-------CHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQG 135
Query: 248 HFARECT 254
H A ECT
Sbjct: 136 HIAAECT 142
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 62/161 (38%), Gaps = 42/161 (26%)
Query: 111 KGNNDSRRNNGGGYGPGGV-VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHF 169
K + +R + PG + +C NC GH+A ECT+ + +NY H
Sbjct: 107 KAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNYRKTG----------HL 156
Query: 170 ARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGR-------------- 215
ARDCP N C C GH+AR C G G
Sbjct: 157 ARDCP-----------NDPICNLCNVSGHVARQCPKANVLGDRSGGGGGARGGGGGGYRD 205
Query: 216 --CYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C NC + GH++RDC G C NCG GH A EC
Sbjct: 206 VVCRNCQQLGHMSRDC----MGPLMICHNCGGRGHLAYECP 242
>gi|418019494|ref|ZP_12658972.1| Cold shock protein [Candidatus Regiella insecticola R5.15]
gi|347605149|gb|EGY29637.1| Cold shock protein [Candidatus Regiella insecticola R5.15]
Length = 70
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+ G+V WF+ AKG+GFI P DGG D+FVH +I+S G++TL E Q+VEF++ G
Sbjct: 3 TKIKGQVKWFNEAKGFGFITPLDGGKDVFVHFSAIQSTGFKTLAEGQNVEFEITDRVKGP 62
Query: 65 YQA 67
A
Sbjct: 63 SAA 65
>gi|229488570|ref|ZP_04382436.1| putative cold-shock DNA-binding domain protein [Rhodococcus
erythropolis SK121]
gi|453069178|ref|ZP_21972445.1| cold shock protein [Rhodococcus qingshengii BKS 20-40]
gi|226187900|dbj|BAH36004.1| probable cold shock protein [Rhodococcus erythropolis PR4]
gi|229324074|gb|EEN89829.1| putative cold-shock DNA-binding domain protein [Rhodococcus
erythropolis SK121]
gi|452764208|gb|EME22480.1| cold shock protein [Rhodococcus qingshengii BKS 20-40]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+G KG+GFI PDDG D+FVH I +GY++L ENQ VEF+V
Sbjct: 2 AQGIVKWFNGEKGFGFIAPDDGTPDVFVHYSEISGNGYKSLDENQRVEFEV 52
>gi|116784713|gb|ABK23446.1| unknown [Picea sitchensis]
Length = 243
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 66/165 (40%), Gaps = 46/165 (27%)
Query: 123 GYGPGGV----VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQG 178
GYGP +C NC GH AREC N+ C NCG H A CP++Q
Sbjct: 39 GYGPRSSRPVELCNNCKRTGHYARECP----------NASVCNNCGVSGHIASKCPKEQL 88
Query: 179 GSNSYN--------NNSGGCFKCGGYGHLARDCITRGSGGGGGG---RCY---------- 217
N N C CG GHLA++C G +CY
Sbjct: 89 CRNCKKPGHLAADCRNEPVCNMCGKTGHLAKECSAHELGLPKSALCKKCYLPGHIMADCP 148
Query: 218 ------NCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
NC ++GHLARDC G CG+PGH R+C +V
Sbjct: 149 NDKACNNCRQTGHLARDCVNSPVCNG-----CGEPGHLVRDCPRV 188
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 40/105 (38%), Gaps = 25/105 (23%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P C NC GH+AR+C NS C CG+P H RDCPR Q
Sbjct: 148 PNDKACNNCRQTGHLARDCV----------NSPVCNGCGEPGHLVRDCPRVQSPPRIMPP 197
Query: 186 NSGG---------------CFKCGGYGHLARDCITRGSGGGGGGR 215
G C CGG GHL+ DC + GG R
Sbjct: 198 RGGFGGGFGGGFDDFKIIICRVCGGRGHLSVDCPSDPLFMRGGFR 242
>gi|383819710|ref|ZP_09974977.1| cold shock protein [Mycobacterium phlei RIVM601174]
gi|383336319|gb|EID14722.1| cold shock protein [Mycobacterium phlei RIVM601174]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+ G V WFD KG+GFI PDDG D+FVH I+ +GYR+L ENQ VEF V+ A G Q
Sbjct: 2 AQGTVKWFDSDKGFGFIAPDDGAKDVFVHFSEIQGNGYRSLDENQRVEFTVEQGAKGP-Q 60
Query: 67 ALDVT 71
A VT
Sbjct: 61 ATGVT 65
>gi|327348756|gb|EGE77613.1| zinc knuckle transcription factor [Ajellomyces dermatitidis ATCC
18188]
Length = 485
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 133 NCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQGGSNSYNNNSG-- 188
NC+G+GH R+CT R + C NCG P H + +C PR G N G
Sbjct: 286 NCNGIGHRVRDCTEKRV------DKFSCRNCGQPGHRSSECTEPRSAEGVECKKCNEGKP 339
Query: 189 -GCFKC--------GGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGS 239
+C GH A+DC S C NC + GH++++C +
Sbjct: 340 DDALRCTWGKLLTFSIVGHFAKDCPQSSSRA-----CRNCNEEGHISKECDKPRNPDTVT 394
Query: 240 CFNCGKPGHFARECTK 255
C NC + GHF+R+CTK
Sbjct: 395 CRNCEEVGHFSRDCTK 410
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C NCG HFARDC + +G CF CG GH +C G C
Sbjct: 41 ACRNCGQSGHFARDCTEPRKA-------TGACFNCGEEGHNKAECT---KPRVFKGHCRI 90
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
C K GH A +C A C NC + GH ECT+
Sbjct: 91 CEKEGHPASECPEKPA---DVCKNCKEEGHKTMECTQ 124
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 GGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
GG C NCG+SGH ARDC G+CFNCG+ GH ECTK
Sbjct: 36 GGKDDACRNCGQSGHFARDC-TEPRKATGACFNCGEEGHNKAECTK 80
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 179 GSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGG 238
G N C CG GH ARDC G C+NCG+ GH +C G
Sbjct: 31 GENEVGGKDDACRNCGQSGHFARDCTEPRKATGA---CFNCGEEGHNKAECTKPRV-FKG 86
Query: 239 SCFNCGKPGHFARECTK 255
C C K GH A EC +
Sbjct: 87 HCRICEKEGHPASECPE 103
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 107 GGYWKGNNDSRRNNGGGYGPGGV-----VCYNCDGVGHVARECTSNRRNSNYNNNSGGCY 161
G W G + + G +G V C NC GH AR+CT R+ +G C+
Sbjct: 13 GETWNGTVEQIGYDVGDFGENEVGGKDDACRNCGQSGHFARDCTEPRK------ATGACF 66
Query: 162 NCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGK 221
NCG+ H +C + + G C C GH A +C + + C NC +
Sbjct: 67 NCGEEGHNKAECTKPRVF-------KGHCRICEKEGHPASECPEKPADV-----CKNCKE 114
Query: 222 SGHLARDC 229
GH +C
Sbjct: 115 EGHKTMEC 122
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C NC+ GH+++EC R N ++ C NC + HF+RDC +++ S NN
Sbjct: 371 CRNCNEEGHISKECDKPR-----NPDTVTCRNCEEVGHFSRDCTKKKDWSKVQCNN---- 421
Query: 191 FKCGGYGHLARDC 203
C GH R C
Sbjct: 422 --CKEMGHTIRRC 432
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 16/93 (17%)
Query: 137 VGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGY 196
VGH A++C + +S C NC + H +++C + + N ++ C C
Sbjct: 356 VGHFAKDCPQS--------SSRACRNCNEEGHISKECDKPR------NPDTVTCRNCEEV 401
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
GH +RDC + +C NC + GH R C
Sbjct: 402 GHFSRDCTKKKDWSKV--QCNNCKEMGHTIRRC 432
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQ 176
P V C NC+ VGH +R+CT + S C NC + H R CP+Q
Sbjct: 390 PDTVTCRNCEEVGHFSRDCTKKKDWSKVQ-----CNNCKEMGHTIRRCPKQ 435
>gi|326437736|gb|EGD83306.1| hypothetical protein PTSG_03915 [Salpingoeca sp. ATCC 50818]
Length = 315
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 62/152 (40%), Gaps = 40/152 (26%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
GG CY C G GH+A C S + + S C+ C HF CP N+ N
Sbjct: 104 GGRTCYKCGGQGHIAVMCPSPEGAKDSPSESE-CHLCHGKGHFQARCP------NTVPRN 156
Query: 187 SGGCFKCGGYGHLARDCITRGSGGGGGG-------------------------RCYNCGK 221
C+KCG YGH+ R+C GGG G CY CG+
Sbjct: 157 V--CWKCGMYGHIGREC------GGGMGYADPYAPHDPYGRPPYYGGGGGFDRTCYVCGE 208
Query: 222 SGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA C G C C KPGH AR+C
Sbjct: 209 RGHLAARCPRSTYNGEKLCHVCRKPGHIARDC 240
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 38/116 (32%), Gaps = 32/116 (27%)
Query: 130 VCYNCDGVGHVAREC----------------TSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
VC+ C GH+ REC CY CG+ H A C
Sbjct: 157 VCWKCGMYGHIGRECGGGMGYADPYAPHDPYGRPPYYGGGGGFDRTCYVCGERGHLAARC 216
Query: 174 PRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
PR S N C C GH+ARDC C C GH + DC
Sbjct: 217 PR------STYNGEKLCHVCRKPGHIARDCKL----------CRICLGEGHRSYDC 256
>gi|300779976|ref|ZP_07089832.1| cold shock protein CspA [Corynebacterium genitalium ATCC 33030]
gi|300534086|gb|EFK55145.1| cold shock protein CspA [Corynebacterium genitalium ATCC 33030]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KG+GFI PDDG +D+FVH I+ G+RTL ENQ VEF++
Sbjct: 2 ATGTVKWFNAEKGFGFIAPDDGSSDVFVHYSEIQGSGFRTLEENQQVEFEI 52
>gi|300857641|ref|YP_003782624.1| cold shock-like protein A [Corynebacterium pseudotuberculosis
FRC41]
gi|337289885|ref|YP_004628906.1| cold shock-like protein A [Corynebacterium ulcerans BR-AD22]
gi|375287807|ref|YP_005122348.1| cold-shock protein [Corynebacterium pseudotuberculosis 3/99-5]
gi|379714509|ref|YP_005302846.1| Cold-shock protein [Corynebacterium pseudotuberculosis 316]
gi|383313412|ref|YP_005374267.1| Cold-shock protein [Corynebacterium pseudotuberculosis P54B96]
gi|384503828|ref|YP_005680498.1| Cold-shock protein [Corynebacterium pseudotuberculosis 1002]
gi|384505919|ref|YP_005682588.1| Cold-shock protein [Corynebacterium pseudotuberculosis C231]
gi|384508010|ref|YP_005684678.1| Cold-shock protein [Corynebacterium pseudotuberculosis I19]
gi|384510105|ref|YP_005689683.1| Cold-shock protein [Corynebacterium pseudotuberculosis PAT10]
gi|384514810|ref|YP_005709902.1| cold shock protein A [Corynebacterium ulcerans 809]
gi|385806674|ref|YP_005843071.1| Cold-shock protein [Corynebacterium pseudotuberculosis 267]
gi|386739576|ref|YP_006212756.1| Cold-shock protein [Corynebacterium pseudotuberculosis 31]
gi|387135776|ref|YP_005691756.1| cold-shock protein [Corynebacterium pseudotuberculosis 42/02-A]
gi|387137834|ref|YP_005693813.1| Cold-shock protein [Corynebacterium pseudotuberculosis CIP 52.97]
gi|387139870|ref|YP_005695848.1| Cold-shock protein [Corynebacterium pseudotuberculosis 1/06-A]
gi|389849579|ref|YP_006351814.1| Cold-shock protein [Corynebacterium pseudotuberculosis 258]
gi|392399786|ref|YP_006436386.1| Cold-shock protein [Corynebacterium pseudotuberculosis Cp162]
gi|397653070|ref|YP_006493753.1| cold shock-like protein A [Corynebacterium ulcerans 0102]
gi|300685095|gb|ADK28017.1| cold shock-like protein A [Corynebacterium pseudotuberculosis
FRC41]
gi|302205379|gb|ADL09721.1| Cold-shock protein [Corynebacterium pseudotuberculosis C231]
gi|302329933|gb|ADL20127.1| Cold-shock protein [Corynebacterium pseudotuberculosis 1002]
gi|308275617|gb|ADO25516.1| Cold-shock protein [Corynebacterium pseudotuberculosis I19]
gi|334696011|gb|AEG80808.1| cold shock protein A [Corynebacterium ulcerans 809]
gi|334698191|gb|AEG82987.1| cold shock-like protein A [Corynebacterium ulcerans BR-AD22]
gi|341824044|gb|AEK91565.1| Cold-shock protein [Corynebacterium pseudotuberculosis PAT10]
gi|348606221|gb|AEP69494.1| Cold-shock protein [Corynebacterium pseudotuberculosis 42/02-A]
gi|349734312|gb|AEQ05790.1| Cold-shock protein [Corynebacterium pseudotuberculosis CIP 52.97]
gi|355391661|gb|AER68326.1| Cold-shock protein [Corynebacterium pseudotuberculosis 1/06-A]
gi|371575096|gb|AEX38699.1| Cold-shock protein [Corynebacterium pseudotuberculosis 3/99-5]
gi|377653215|gb|AFB71564.1| Cold-shock protein [Corynebacterium pseudotuberculosis 316]
gi|380868913|gb|AFF21387.1| Cold-shock protein [Corynebacterium pseudotuberculosis P54B96]
gi|383804067|gb|AFH51146.1| Cold-shock protein [Corynebacterium pseudotuberculosis 267]
gi|384476270|gb|AFH90066.1| Cold-shock protein [Corynebacterium pseudotuberculosis 31]
gi|388246885|gb|AFK15876.1| Cold-shock protein [Corynebacterium pseudotuberculosis 258]
gi|390530864|gb|AFM06593.1| Cold-shock protein [Corynebacterium pseudotuberculosis Cp162]
gi|393402026|dbj|BAM26518.1| cold shock-like protein A [Corynebacterium ulcerans 0102]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ G V WF+ KG+GFI PDDG AD+FVH I+ +G+RTL ENQ VEF++ A G
Sbjct: 2 AQGTVKWFNAEKGFGFIAPDDGSADVFVHYSEIQGNGFRTLEENQKVEFEIGEGAKG 58
>gi|293606144|ref|ZP_06688509.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|359796272|ref|ZP_09298876.1| cold shock-like protein [Achromobacter arsenitoxydans SY8]
gi|292815599|gb|EFF74715.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|359365791|gb|EHK67484.1| cold shock-like protein [Achromobacter arsenitoxydans SY8]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI PDDG DLF H I+S+GY++L ENQ V F+V
Sbjct: 2 ATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEIRSEGYKSLQENQRVTFEV 52
>gi|238919337|ref|YP_002932852.1| cold-shock DNA-binding domain protein [Edwardsiella ictaluri
93-146]
gi|269138654|ref|YP_003295355.1| major cold shock protein [Edwardsiella tarda EIB202]
gi|387867352|ref|YP_005698821.1| Cold shock protein CspA [Edwardsiella tarda FL6-60]
gi|238868906|gb|ACR68617.1| cold-shock DNA-binding domain protein [Edwardsiella ictaluri
93-146]
gi|267984315|gb|ACY84144.1| major cold shock protein [Edwardsiella tarda EIB202]
gi|304558665|gb|ADM41329.1| Cold shock protein CspA [Edwardsiella tarda FL6-60]
Length = 71
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PD+GG+D+FVH +I+S+GY++L E Q V F+VQ A
Sbjct: 4 KMTGLVKWFNADKGFGFITPDNGGSDIFVHFSAIQSNGYKSLDEGQKVAFEVQTGAAKGP 63
Query: 66 QALDVT 71
A++VT
Sbjct: 64 SAINVT 69
>gi|221222052|gb|ACM09687.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 140
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 29/130 (22%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSG 188
+ CY C GH+AR+C CYNC H +RDC + N
Sbjct: 39 LFCYRCGEQGHIARDC---------EQTEDACYNCHRSGHISRDCD---------HANEQ 80
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
C+ CGG+GH+ + C +CY CG+ GH+A C +C+ CG GH
Sbjct: 81 KCYSCGGFGHIQKLC--------DKVKCYRCGEIGHVAVQCSKASEV---NCYKCGNTGH 129
Query: 249 FARECTKVAN 258
A+ECT A
Sbjct: 130 LAKECTIEAT 139
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG---CFKCGGYGHLARDCITRGSGGGG 212
+S C+ CG P H+ ++CP G G C++CG GH+ARDC
Sbjct: 4 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDA--- 60
Query: 213 GGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKV 256
CYNC +SGH++RDC C++CG GH + C KV
Sbjct: 61 ---CYNCHRSGHISRDCDHANE---QKCYSCGGFGHIQKLCDKV 98
>gi|238784506|ref|ZP_04628514.1| Cold shock-like protein cspD [Yersinia bercovieri ATCC 43970]
gi|238714569|gb|EEQ06573.1| Cold shock-like protein cspD [Yersinia bercovieri ATCC 43970]
Length = 85
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|386829546|ref|ZP_10116653.1| cold shock protein [Beggiatoa alba B18LD]
gi|386430430|gb|EIJ44258.1| cold shock protein [Beggiatoa alba B18LD]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
TG V WF+ +KG+GF+ PDDGG D+FVH +I+S G++TL E Q+V+F+ Q+ G
Sbjct: 3 TGTVKWFNESKGFGFLAPDDGGKDVFVHFSTIQSGGFKTLKEGQAVQFEAQMGPKG 58
>gi|167754667|ref|ZP_02426794.1| hypothetical protein CLORAM_00170 [Clostridium ramosum DSM 1402]
gi|237733540|ref|ZP_04564021.1| cold shock DNA-binding protein [Mollicutes bacterium D7]
gi|365830448|ref|ZP_09372024.1| cold shock-like protein CspD [Coprobacillus sp. 3_3_56FAA]
gi|374625911|ref|ZP_09698325.1| cold shock-like protein CspD [Coprobacillus sp. 8_2_54BFAA]
gi|167705499|gb|EDS20078.1| cold-shock DNA-binding domain protein [Clostridium ramosum DSM
1402]
gi|229383373|gb|EEO33464.1| cold shock DNA-binding protein [Coprobacillus sp. D7]
gi|365263247|gb|EHM93091.1| cold shock-like protein CspD [Coprobacillus sp. 3_3_56FAA]
gi|373914437|gb|EHQ46252.1| cold shock-like protein CspD [Coprobacillus sp. 8_2_54BFAA]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
STGKV WF+ KG+GFI D+ G D+FVH +I ++G++TL E Q VEFD+ E+D Q
Sbjct: 2 STGKVKWFNQEKGFGFITNDEDGKDIFVHFSAINAEGFKTLEEGQVVEFDIN-ESDRGPQ 60
Query: 67 ALDVT 71
A +VT
Sbjct: 61 AQNVT 65
>gi|317506528|ref|ZP_07964325.1| cold-shock DNA-binding domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316255167|gb|EFV14440.1| cold-shock DNA-binding domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 9 GKVTWFDGAKGYGFIRPDDGGADLFVHQKSIK-SDGYRTLYENQSVEFDVQLEADGKYQA 67
G V WF+ KG+GFI PDDGG DLFVH +I S G+RTL ENQ V+F+VQ G A
Sbjct: 4 GTVKWFNEEKGFGFITPDDGGKDLFVHFSAITGSTGFRTLQENQRVQFEVQASDRGPQAA 63
>gi|300312332|ref|YP_003776424.1| cold shock-like transcription regulator protein [Herbaspirillum
seropedicae SmR1]
gi|409406753|ref|ZP_11255215.1| cold shock-like transcription regulator protein [Herbaspirillum
sp. GW103]
gi|415945205|ref|ZP_11556341.1| Cold shock-like protein cspE [Herbaspirillum frisingense GSF30]
gi|300075117|gb|ADJ64516.1| cold shock-like transcription regulator protein [Herbaspirillum
seropedicae SmR1]
gi|386435302|gb|EIJ48127.1| cold shock-like transcription regulator protein [Herbaspirillum
sp. GW103]
gi|407758370|gb|EKF68205.1| Cold shock-like protein cspE [Herbaspirillum frisingense GSF30]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
+TG V WF+ AKG+GFI PD+GG DLF H +I+S+G+++L ENQ V F+V GK
Sbjct: 2 ATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGK 59
>gi|225850576|ref|YP_002730810.1| hypothetical protein PERMA_1024 [Persephonella marina EX-H1]
gi|225644787|gb|ACO02973.1| conserved domain protein [Persephonella marina EX-H1]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
R TG V WF+ KGYGFI DDG D+FVH +I +G++TL E Q VEFDV E G+
Sbjct: 2 RLTGTVKWFNSKKGYGFITRDDGQGDVFVHFSAIAENGFKTLEEGQKVEFDVVQEDKGQ 60
>gi|119898412|ref|YP_933625.1| cold shock-like protein [Azoarcus sp. BH72]
gi|119670825|emb|CAL94738.1| cold shock-like protein [Azoarcus sp. BH72]
Length = 69
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
++ TG V WF+ AKG+GFI P++GG DLF H I+S G+++L ENQ VEF+V+
Sbjct: 1 MSTQTGTVKWFNDAKGFGFITPENGGDDLFAHFSEIQSSGFKSLAENQRVEFEVK 55
>gi|170726448|ref|YP_001760474.1| cold-shock DNA-binding domain-containing protein [Shewanella
woodyi ATCC 51908]
gi|169811795|gb|ACA86379.1| cold-shock DNA-binding domain protein [Shewanella woodyi ATCC
51908]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKS-DGYRTLYENQSVEFDV 57
S G V WF+ KGYGFI P+DGG DLFVH I+S GY TL + QSVEFDV
Sbjct: 1 MSKGTVKWFNADKGYGFITPEDGGKDLFVHHSEIRSGGGYATLNDGQSVEFDV 53
>gi|334129876|ref|ZP_08503679.1| Cold shock-like protein cspE [Methyloversatilis universalis FAM5]
gi|333444912|gb|EGK72855.1| Cold shock-like protein cspE [Methyloversatilis universalis FAM5]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ AKG+GFI PDDGG DLF H +I+ +G+R+L ENQ V F+V
Sbjct: 2 ATGTVKWFNDAKGFGFISPDDGGEDLFAHFSAIQGNGFRSLQENQKVSFEV 52
>gi|407715861|ref|YP_006837141.1| cold shock-like protein CspC2 [Cycloclasticus sp. P1]
gi|407256197|gb|AFT66638.1| Cold shock-like protein CspC2 [Cycloclasticus sp. P1]
Length = 66
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ +KG+GFI P+DG D+FVH +I S+G+RTL E Q V FDV+ G Q
Sbjct: 2 ATGTVKWFNESKGFGFITPEDGSKDVFVHFSAIASEGFRTLNEGQQVNFDVENGPKGP-Q 60
Query: 67 ALDVTA 72
A++VTA
Sbjct: 61 AVNVTA 66
>gi|422015212|ref|ZP_16361814.1| cold shock protein CspE [Providencia burhodogranariea DSM 19968]
gi|414099833|gb|EKT61467.1| cold shock protein CspE [Providencia burhodogranariea DSM 19968]
Length = 69
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G V WF+ +KG+GFI P+DG D+FVH +I SDG++TL E Q VEF++ A G
Sbjct: 1 MSKVKGSVKWFNESKGFGFITPEDGSKDVFVHFSAITSDGFKTLAEGQRVEFEITDGAKG 60
>gi|269103742|ref|ZP_06156439.1| cold shock protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163640|gb|EEZ42136.1| cold shock protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 69
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
++++TG V WF+ KG+GFI D+GGAD+FVH ++I S+G++TL E Q V FDV+ G
Sbjct: 1 MSKATGIVKWFNEEKGFGFISQDNGGADVFVHFRAIASEGFKTLAEGQKVSFDVEQGQKG 60
Query: 64 KYQALDVTA 72
QA +V A
Sbjct: 61 P-QAANVVA 68
>gi|115377442|ref|ZP_01464645.1| conserved domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115365540|gb|EAU64572.1| conserved domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 100
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ AKG+GFI D GG D+F H +I DG+RTL E Q V+FDV
Sbjct: 35 ATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDV 85
>gi|238792393|ref|ZP_04636027.1| Cold shock-like protein cspE [Yersinia intermedia ATCC 29909]
gi|238728319|gb|EEQ19839.1| Cold shock-like protein cspE [Yersinia intermedia ATCC 29909]
Length = 72
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
M +++ TG+V WF+ +KG+GFI DGG D+FVH +I +DG++TL E Q VE+ +Q
Sbjct: 1 MKFMSKKTGQVKWFNESKGFGFIEQHDGGKDVFVHFSAIATDGFKTLAEGQRVEYTIQ 58
>gi|410663197|ref|YP_006915568.1| cold-shock DNA-binding protein family protein [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025554|gb|AFU97838.1| cold-shock DNA-binding protein family protein [Simiduia
agarivorans SA1 = DSM 21679]
Length = 83
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKGYGFI PD GG DLF H +I+ +GYRTL Q V FD+ +E D A
Sbjct: 3 TGTVKWFNNAKGYGFILPDGGGDDLFAHYSAIEMEGYRTLKAGQQVCFDI-VEGDKGLHA 61
Query: 68 LDVTA 72
++ A
Sbjct: 62 TNIQA 66
>gi|334338056|ref|YP_004543208.1| cold-shock DNA-binding domain-containing protein [Isoptericola
variabilis 225]
gi|334108424|gb|AEG45314.1| cold-shock DNA-binding domain protein [Isoptericola variabilis
225]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+ G V WF+ KGYGFI P GG DLFVH +I+SDGYRTL E Q VEF+V
Sbjct: 2 AQGTVKWFNAEKGYGFITPTSGGQDLFVHYSAIQSDGYRTLDEGQQVEFEV 52
>gi|295677335|ref|YP_003605859.1| cold-shock protein [Burkholderia sp. CCGE1002]
gi|295437178|gb|ADG16348.1| cold-shock DNA-binding domain protein [Burkholderia sp. CCGE1002]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D GG DLF H I+S+G+++L ENQ V F+V+ GK A
Sbjct: 3 TGVVKWFNDAKGFGFITSDAGGEDLFAHFSEIRSEGFKSLKENQRVSFEVKTSPKGKQAA 62
>gi|407919077|gb|EKG12332.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 495
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 70/185 (37%), Gaps = 19/185 (10%)
Query: 71 TAPGGAPVHSSKNNNTNNNSGYNNNRGGRGGGGAGFGGYWKGNNDSRRNNGGGYGPGGVV 130
A G P + N ++G+ +R G G+ + R G V
Sbjct: 254 MAVEGWPADAEDNFARLEDAGFVEDRRVPKCDNCGGLGHTRRACKEEREEPAGRP--EVK 311
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C C +GH AR+C R N C NC H +RDCP + C
Sbjct: 312 CMVCSELGHRARDCKQERINPFL------CRNCKQFGHNSRDCPEPRSAEGVE------C 359
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFA 250
KC GH + DC C NCG+ GH A +C +C NC + GHF+
Sbjct: 360 RKCHEMGHFSNDC-----PNTPKMTCRNCGEEGHKASECSKPRDPSTVTCRNCDELGHFS 414
Query: 251 RECTK 255
+EC K
Sbjct: 415 KECPK 419
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 159 GCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYN 218
C NC + HFARDCP+ + +G CF CG G+ DC G C
Sbjct: 61 ACRNCDEEGHFARDCPQPK-------KMAGECFNCGEVGYNKADCTNPKVDRPFNGECRI 113
Query: 219 CGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECT 254
C + GH A C +C NC K GH ECT
Sbjct: 114 CKEIGHPAAQCPQKPP---TTCKNCLKEGHVTSECT 146
>gi|238795829|ref|ZP_04639342.1| Cold shock-like protein cspD [Yersinia mollaretii ATCC 43969]
gi|238720292|gb|EEQ12095.1| Cold shock-like protein cspD [Yersinia mollaretii ATCC 43969]
Length = 85
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHEGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|441521568|ref|ZP_21003227.1| putative cold shock protein [Gordonia sihwensis NBRC 108236]
gi|441458791|dbj|GAC61188.1| putative cold shock protein [Gordonia sihwensis NBRC 108236]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 1 MAQLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLE 60
MAQ G V WF+G KG+GFI PD G D+FVH +I G+R L E Q VEFD++
Sbjct: 1 MAQ-----GTVKWFNGEKGFGFIAPDSGSEDVFVHYSAISGGGFRNLEEAQRVEFDLEQG 55
Query: 61 ADGKYQALDVTA 72
A G QA +VTA
Sbjct: 56 AKGP-QATNVTA 66
>gi|37526673|ref|NP_930017.1| cold shock protein [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36786105|emb|CAE15157.1| cold shock protein [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 69
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+ + TG V WF+ +KG+GFI P DG D+FVH +I+S+G++TL E Q VEF++Q G
Sbjct: 1 MAKITGTVKWFNESKGFGFITPADGSKDVFVHFSAIQSEGFKTLAEGQKVEFEIQDGQKG 60
Query: 64 KYQALDVTA 72
A +VTA
Sbjct: 61 P-SAANVTA 68
>gi|226227592|ref|YP_002761698.1| cold shock protein [Gemmatimonas aurantiaca T-27]
gi|226090783|dbj|BAH39228.1| cold shock protein [Gemmatimonas aurantiaca T-27]
Length = 69
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
R+TG V WF+ AKG+GFI P DG D FVH +I+ +G+++L E ++VEFD+
Sbjct: 2 RTTGTVKWFNDAKGFGFITPSDGQKDCFVHHSAIQGNGFKSLTEGETVEFDI 53
>gi|213024594|ref|ZP_03339041.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 71
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV FDV G +
Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNH 60
Query: 66 QALDVTAPGGA 76
++ V A
Sbjct: 61 ASVIVPIEAEA 71
>gi|307107761|gb|EFN56003.1| hypothetical protein CHLNCDRAFT_145396 [Chlorella variabilis]
Length = 301
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
R G V WF+ KGYGFI ++ ++FVHQ +I++ GYR+L E + VEFD+ + DGK
Sbjct: 12 RKIGTVKWFNSTKGYGFITCEESEDEVFVHQSNIETTGYRSLKEGEEVEFDLVVADDGKK 71
Query: 66 QALDV 70
+A +
Sbjct: 72 KAFRL 76
>gi|433457619|ref|ZP_20415603.1| cold-shock DNA-binding protein family [Arthrobacter
crystallopoietes BAB-32]
gi|432194558|gb|ELK51169.1| cold-shock DNA-binding protein family [Arthrobacter
crystallopoietes BAB-32]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ KG+GFI PDDG AD+F H +I+S+GYR L E Q VEF+ G Q
Sbjct: 2 ATGTVKWFNSEKGFGFIAPDDGSADVFAHYSAIESNGYRELREEQKVEFETTQGPKG-LQ 60
Query: 67 ALDVTA 72
A ++ A
Sbjct: 61 AANIRA 66
>gi|361124091|gb|EHK96212.1| putative ATP-dependent RNA helicase glh-4 [Glarea lozoyensis 74030]
Length = 452
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 113 NNDSRRNNGGGYGPGGVV-CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFAR 171
N SR N G GV C NCD +GH + C ++ + C+NC + H R
Sbjct: 207 ENMSRLENAGKPVDRGVPKCSNCDQLGHTFKGCPEEKQEKT-DKIVVSCFNCSEVGHRMR 265
Query: 172 DCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCG- 230
DCP + + C C GH +++C S G C C ++GH A+DC
Sbjct: 266 DCPVPRV-------DKFACRNCKASGHSSKECTEPRSAEGV--ECKKCNETGHFAKDCPQ 316
Query: 231 AGGAGGGGSCFNCGKPGHFARECT 254
GG GGGG+C NCG+ GH ++CT
Sbjct: 317 GGGGGGGGACHNCGEEGHRKQDCT 340
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 166 PEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGG--GRCYNCGKSG 223
PE + R + + C C GH + C C+NC + G
Sbjct: 202 PESAEENMSRLENAGKPVDRGVPKCSNCDQLGHTFKGCPEEKQEKTDKIVVSCFNCSEVG 261
Query: 224 HLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
H RDC +C NC GH ++ECT+
Sbjct: 262 HRMRDCPVPRVDKF-ACRNCKASGHSSKECTE 292
>gi|311107157|ref|YP_003980010.1| cold-shock DNA-binding domain-containing protein 2 [Achromobacter
xylosoxidans A8]
gi|421484315|ref|ZP_15931886.1| cold shock-like protein [Achromobacter piechaudii HLE]
gi|422320064|ref|ZP_16401132.1| cold shock-like protein [Achromobacter xylosoxidans C54]
gi|423018596|ref|ZP_17009317.1| cold shock-like protein [Achromobacter xylosoxidans AXX-A]
gi|310761846|gb|ADP17295.1| cold-shock DNA-binding domain protein 2 [Achromobacter
xylosoxidans A8]
gi|317405217|gb|EFV85556.1| cold shock-like protein [Achromobacter xylosoxidans C54]
gi|338778358|gb|EGP42833.1| cold shock-like protein [Achromobacter xylosoxidans AXX-A]
gi|400197524|gb|EJO30489.1| cold shock-like protein [Achromobacter piechaudii HLE]
Length = 68
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ KGYGFI PDDG DLF H I+S+GY++L ENQ V F+V
Sbjct: 2 ATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEIRSEGYKSLQENQRVTFEV 52
>gi|237746806|ref|ZP_04577286.1| cold-shock DNA-binding family protein [Oxalobacter formigenes
HOxBLS]
gi|229378157|gb|EEO28248.1| cold-shock DNA-binding family protein [Oxalobacter formigenes
HOxBLS]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ +KG+GFI PD+GG D+F H +I S+G+++L ENQ V FD+ GK Q
Sbjct: 2 ATGTVKWFNDSKGFGFITPDEGGEDVFAHFSAINSEGFKSLKENQRVSFDITTGPKGK-Q 60
Query: 67 ALDVT 71
A ++T
Sbjct: 61 ASNIT 65
>gi|149911304|ref|ZP_01899925.1| cold-shock DNA-binding domain family protein [Moritella sp. PE36]
gi|149805619|gb|EDM65621.1| cold-shock DNA-binding domain family protein [Moritella sp. PE36]
Length = 67
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
S G V WF+ KG+GFI PD+GG DLFVH I++ GY TL + Q VEF+V
Sbjct: 1 MSRGTVKWFNADKGFGFITPDEGGNDLFVHHSEIQTSGYATLEDGQKVEFEV 52
>gi|225710718|gb|ACO11205.1| Zinc finger CCHC domain-containing protein 9 [Caligus
rogercresseyi]
Length = 402
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNN-NSGGCFKCGGYGHLARDCITRGSGGGG--GGRC 216
CY C P HF DCP +G ++ G CFKCG H ++DC ++ G C
Sbjct: 256 CYLCRKPGHFLSDCPEAEGSKSAKTVGTMGSCFKCGSAEHSSKDCQSKLKGEAAYRFAVC 315
Query: 217 YNCGKSGHLARDCGAGGAG---GGGSCFNCGKPGHFARECTK 255
+ C ++GHLA+ C G GG C CG H EC +
Sbjct: 316 FICNQTGHLAKACPDNPKGLYPKGGGCRFCGSVEHLKSECKR 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Query: 113 NNDSRRNNGGGYGPGGVVCYNCDGVGHVARECTSNR--RNSNYNNNSGGCYNCGDPEHFA 170
+ RR +VCY C GH +C +++ G C+ CG EH +
Sbjct: 238 KKERRRAENELARSKKLVCYLCRKPGHFLSDCPEAEGSKSAKTVGTMGSCFKCGSAEHSS 297
Query: 171 RDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCI--TRGSGGGGGGRCYNCGKSGHLARD 228
+DC + G +Y CF C GHLA+ C +G GGG C CG HL +
Sbjct: 298 KDCQSKLKGEAAY--RFAVCFICNQTGHLAKACPDNPKGLYPKGGG-CRFCGSVEHLKSE 354
Query: 229 C 229
C
Sbjct: 355 C 355
>gi|449145474|ref|ZP_21776279.1| cold-shock DNA-binding domain-containing protein [Vibrio mimicus
CAIM 602]
gi|449078815|gb|EMB49744.1| cold-shock DNA-binding domain-containing protein [Vibrio mimicus
CAIM 602]
Length = 70
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ +KG+GFI PD G +D+FVH SI SDG++TL+E Q V F ++ + G QA
Sbjct: 6 TGSVKWFNESKGFGFITPDSGSSDVFVHFNSIASDGFKTLFEGQKVSFSIEQGSKGP-QA 64
Query: 68 LDV 70
++V
Sbjct: 65 VNV 67
>gi|343507537|ref|ZP_08744939.1| cold shock protein [Vibrio ichthyoenteri ATCC 700023]
gi|342798107|gb|EGU33738.1| cold shock protein [Vibrio ichthyoenteri ATCC 700023]
Length = 70
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI DDGGAD+FVH + I SDG++TL E Q V F+V+ G
Sbjct: 4 KVTGSVKWFNETKGFGFISQDDGGADVFVHFREIVSDGFKTLTEGQKVSFNVEQGPKGP- 62
Query: 66 QALDVT 71
QA VT
Sbjct: 63 QATQVT 68
>gi|407837810|gb|EKF99870.1| hypothetical protein TCSYLVIO_009208 [Trypanosoma cruzi]
Length = 503
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 129 VVCYNCDGVGHVARECTSNRRNSNYNNN--SGGCYNCGDPEHFARDCPRQQGGSNSYNNN 186
V C +C +GH +C S ++ + + C +CG H CP + + +
Sbjct: 37 VTCRSCGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCH 96
Query: 187 SGG----------CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGG 236
G CF CG YGH A+ C +R C++C +GH + DC
Sbjct: 97 QRGHMAPTCPLTRCFNCGSYGHSAQLCYSRPL-------CFHCSLAGHRSTDCPMK--PK 147
Query: 237 GGSCFNCGKPGHFARECTKVA 257
G C+ C +PGH ECT+ A
Sbjct: 148 GRVCYRCKEPGHEMAECTQTA 168
>gi|238762119|ref|ZP_04623092.1| Cold shock-like protein cspD [Yersinia kristensenii ATCC 33638]
gi|238699847|gb|EEP92591.1| Cold shock-like protein cspD [Yersinia kristensenii ATCC 33638]
Length = 85
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHEGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|170745542|ref|YP_001766999.1| cold-shock DNA-binding domain-containing protein
[Methylobacterium radiotolerans JCM 2831]
gi|170659143|gb|ACB28197.1| cold-shock DNA-binding domain protein [Methylobacterium
radiotolerans JCM 2831]
Length = 69
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+TG V WF+ KGYGFI+PDDGG D+FVH +++ G R+L E Q + +DV+
Sbjct: 2 ATGTVKWFNETKGYGFIQPDDGGKDVFVHISAVERAGLRSLNEGQKIAYDVE 53
>gi|16759816|ref|NP_455433.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16764305|ref|NP_459920.1| stress response protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29142411|ref|NP_805753.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414004|ref|YP_151079.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62179468|ref|YP_215885.1| CspA-like protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|157146440|ref|YP_001453759.1| hypothetical protein CKO_02200 [Citrobacter koseri ATCC BAA-895]
gi|161503927|ref|YP_001571039.1| hypothetical protein SARI_02018 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|161614826|ref|YP_001588791.1| hypothetical protein SPAB_02579 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167550382|ref|ZP_02344139.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168230817|ref|ZP_02655875.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168236854|ref|ZP_02661912.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168240791|ref|ZP_02665723.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168263571|ref|ZP_02685544.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168466527|ref|ZP_02700389.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168819926|ref|ZP_02831926.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446783|ref|YP_002040144.1| cold shock domain-containing protein CspD [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451466|ref|YP_002044937.1| cold shock domain-containing protein CspD [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194470525|ref|ZP_03076509.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194734305|ref|YP_002114000.1| cold shock domain-containing protein CspD [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197248616|ref|YP_002145861.1| cold shock domain-containing protein CspD [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264137|ref|ZP_03164211.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197362927|ref|YP_002142564.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198245012|ref|YP_002214871.1| cold shock domain-containing protein CspD [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200391092|ref|ZP_03217703.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930059|ref|ZP_03221080.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205352154|ref|YP_002225955.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856338|ref|YP_002242989.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213053362|ref|ZP_03346240.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419933|ref|ZP_03352999.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213428023|ref|ZP_03360773.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581371|ref|ZP_03363197.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213620716|ref|ZP_03373499.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213649853|ref|ZP_03379906.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865355|ref|ZP_03387474.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224582755|ref|YP_002636553.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238913423|ref|ZP_04657260.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289805674|ref|ZP_06536303.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|289825001|ref|ZP_06544364.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|374981612|ref|ZP_09722936.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375000660|ref|ZP_09725000.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375113792|ref|ZP_09758962.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375118357|ref|ZP_09763524.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|375122948|ref|ZP_09768112.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378444381|ref|YP_005232013.1| cold shock-like protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378449294|ref|YP_005236653.1| stress response protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378698840|ref|YP_005180797.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378955729|ref|YP_005213216.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378960153|ref|YP_005217639.1| Cold shock-like protein cspD [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|378983505|ref|YP_005246660.1| cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378988290|ref|YP_005251454.1| stress response protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379700111|ref|YP_005241839.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383495686|ref|YP_005396375.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386590811|ref|YP_006087211.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409249352|ref|YP_006885184.1| Cold shock-like protein cspD [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416421953|ref|ZP_11689857.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416431470|ref|ZP_11695624.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416441550|ref|ZP_11701762.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416445327|ref|ZP_11704216.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416454044|ref|ZP_11710047.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416459256|ref|ZP_11713765.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416467364|ref|ZP_11717381.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416480960|ref|ZP_11723016.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416490810|ref|ZP_11726769.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416500362|ref|ZP_11731433.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416505273|ref|ZP_11733707.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416523191|ref|ZP_11740938.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416530403|ref|ZP_11744929.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416536509|ref|ZP_11748471.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416546309|ref|ZP_11753795.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416550473|ref|ZP_11756008.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416560391|ref|ZP_11761220.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416571955|ref|ZP_11767038.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416578410|ref|ZP_11770530.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416582348|ref|ZP_11772622.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416593659|ref|ZP_11780065.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416599386|ref|ZP_11783620.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416604888|ref|ZP_11786509.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612536|ref|ZP_11791561.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416618003|ref|ZP_11794408.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416634318|ref|ZP_11802483.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640931|ref|ZP_11805253.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416650177|ref|ZP_11810285.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416658052|ref|ZP_11814110.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416669791|ref|ZP_11819634.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416676190|ref|ZP_11821712.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416691606|ref|ZP_11826324.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416707469|ref|ZP_11832567.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416714767|ref|ZP_11838085.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416716545|ref|ZP_11838892.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416724795|ref|ZP_11845179.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416732583|ref|ZP_11849839.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740430|ref|ZP_11854386.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416746483|ref|ZP_11857805.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416755713|ref|ZP_11862227.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416760909|ref|ZP_11865117.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416767384|ref|ZP_11869857.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417356835|ref|ZP_12132297.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417372208|ref|ZP_12142559.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|418483793|ref|ZP_13052799.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418487906|ref|ZP_13056038.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493934|ref|ZP_13060394.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418500109|ref|ZP_13066508.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418501931|ref|ZP_13068307.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509748|ref|ZP_13076040.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418510994|ref|ZP_13077264.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418526769|ref|ZP_13092738.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763518|ref|ZP_13319633.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765328|ref|ZP_13321416.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418769404|ref|ZP_13325434.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418773511|ref|ZP_13329495.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418779562|ref|ZP_13335462.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784888|ref|ZP_13340724.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418790765|ref|ZP_13346535.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418791511|ref|ZP_13347270.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418798839|ref|ZP_13354512.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418803571|ref|ZP_13359189.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418808427|ref|ZP_13363982.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418812584|ref|ZP_13368107.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418815781|ref|ZP_13371276.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418819993|ref|ZP_13375428.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418825288|ref|ZP_13380591.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418833332|ref|ZP_13388262.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418835256|ref|ZP_13390152.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418842171|ref|ZP_13396984.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418843107|ref|ZP_13397906.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418850038|ref|ZP_13404757.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418853379|ref|ZP_13408070.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418857120|ref|ZP_13411750.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418861828|ref|ZP_13416378.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418868990|ref|ZP_13423431.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419728049|ref|ZP_14255017.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419736842|ref|ZP_14263668.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419740486|ref|ZP_14267212.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742454|ref|ZP_14269127.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749880|ref|ZP_14276352.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419790970|ref|ZP_14316636.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419794452|ref|ZP_14320064.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358077|ref|ZP_15808384.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421364695|ref|ZP_15814926.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367540|ref|ZP_15817733.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370276|ref|ZP_15820442.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377721|ref|ZP_15827811.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382449|ref|ZP_15832496.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421386185|ref|ZP_15836200.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392050|ref|ZP_15842011.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421393110|ref|ZP_15843057.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421399018|ref|ZP_15848922.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404927|ref|ZP_15854763.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408062|ref|ZP_15857868.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411126|ref|ZP_15860894.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419163|ref|ZP_15868859.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421443|ref|ZP_15871111.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425381|ref|ZP_15875017.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421432336|ref|ZP_15881912.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421434505|ref|ZP_15884054.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438905|ref|ZP_15888399.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446460|ref|ZP_15895872.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450775|ref|ZP_15900145.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421569126|ref|ZP_16014830.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573520|ref|ZP_16019156.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421578870|ref|ZP_16024441.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584837|ref|ZP_16030344.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887282|ref|ZP_16318442.1| stress response protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025056|ref|ZP_16371518.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030079|ref|ZP_16376313.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|423139374|ref|ZP_17127012.1| cold shock domain protein CspD [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|427547391|ref|ZP_18926827.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427563412|ref|ZP_18931593.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427582344|ref|ZP_18936349.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427604696|ref|ZP_18941192.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427629491|ref|ZP_18946095.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427652724|ref|ZP_18950861.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660292|ref|ZP_18955808.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665420|ref|ZP_18960566.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427745378|ref|ZP_18965593.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436617832|ref|ZP_20514412.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436795512|ref|ZP_20522332.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811674|ref|ZP_20530554.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436816046|ref|ZP_20533597.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436839194|ref|ZP_20537514.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851641|ref|ZP_20542240.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858403|ref|ZP_20546923.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865579|ref|ZP_20551546.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875246|ref|ZP_20557153.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436879063|ref|ZP_20559454.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436884884|ref|ZP_20562282.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896699|ref|ZP_20569455.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906678|ref|ZP_20575524.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911371|ref|ZP_20577200.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918552|ref|ZP_20581698.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930768|ref|ZP_20588993.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436933007|ref|ZP_20589446.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942513|ref|ZP_20595459.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436947898|ref|ZP_20598304.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436964297|ref|ZP_20605933.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436969870|ref|ZP_20608785.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436977575|ref|ZP_20612353.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436995499|ref|ZP_20619224.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437005250|ref|ZP_20622342.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437022839|ref|ZP_20628704.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437032142|ref|ZP_20631786.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041937|ref|ZP_20635842.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437050161|ref|ZP_20640442.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055292|ref|ZP_20643435.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437068652|ref|ZP_20650783.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437077556|ref|ZP_20655455.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086899|ref|ZP_20660908.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088537|ref|ZP_20661574.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437112173|ref|ZP_20668556.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437124112|ref|ZP_20673183.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134255|ref|ZP_20678679.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437138125|ref|ZP_20680855.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147744|ref|ZP_20687026.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437156124|ref|ZP_20692049.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161583|ref|ZP_20695519.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437173101|ref|ZP_20701601.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177592|ref|ZP_20704072.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185452|ref|ZP_20709026.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437248577|ref|ZP_20715053.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437260901|ref|ZP_20717971.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437267120|ref|ZP_20721086.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437276479|ref|ZP_20726488.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437300300|ref|ZP_20733064.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437311203|ref|ZP_20735798.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437325763|ref|ZP_20740035.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336444|ref|ZP_20743051.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437364349|ref|ZP_20748581.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437420109|ref|ZP_20754486.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437448495|ref|ZP_20759237.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437467909|ref|ZP_20764551.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437478777|ref|ZP_20767790.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437489595|ref|ZP_20770380.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512771|ref|ZP_20777326.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437537486|ref|ZP_20781744.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437556066|ref|ZP_20784903.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437575469|ref|ZP_20790265.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437590735|ref|ZP_20794497.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437606995|ref|ZP_20800013.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437622033|ref|ZP_20804543.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437659064|ref|ZP_20811991.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437678611|ref|ZP_20817813.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437688655|ref|ZP_20819885.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437704413|ref|ZP_20824718.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437729093|ref|ZP_20830640.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437792868|ref|ZP_20837314.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437804005|ref|ZP_20838720.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437841801|ref|ZP_20846708.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|437859163|ref|ZP_20847838.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438080209|ref|ZP_20857553.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438084186|ref|ZP_20858261.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438104672|ref|ZP_20865936.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438114159|ref|ZP_20869935.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438134382|ref|ZP_20874071.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|440764415|ref|ZP_20943443.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440769437|ref|ZP_20948395.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440770912|ref|ZP_20949840.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445130729|ref|ZP_21381437.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445139747|ref|ZP_21384505.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445152456|ref|ZP_21390839.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445175696|ref|ZP_21397419.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445216403|ref|ZP_21402061.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445236441|ref|ZP_21407084.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445265841|ref|ZP_21410085.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445327739|ref|ZP_21412739.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346408|ref|ZP_21418778.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445367392|ref|ZP_21425519.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452120888|ref|YP_007471136.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|25296125|pir||AG0609 cold shock-like protein CspD [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16419455|gb|AAL19879.1| CspA-like protein but not cold shock induced [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16502109|emb|CAD05345.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138041|gb|AAO69602.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128261|gb|AAV77767.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62127101|gb|AAX64804.1| CspA-like protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|157083645|gb|ABV13323.1| hypothetical protein CKO_02200 [Citrobacter koseri ATCC BAA-895]
gi|160865274|gb|ABX21897.1| hypothetical protein SARI_02018 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|161364190|gb|ABX67958.1| hypothetical protein SPAB_02579 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405446|gb|ACF65668.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194409770|gb|ACF69989.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456889|gb|EDX45728.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194709807|gb|ACF89028.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630992|gb|EDX49578.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197094404|emb|CAR59920.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212319|gb|ACH49716.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197242392|gb|EDY25012.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290126|gb|EDY29483.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939528|gb|ACH76861.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603537|gb|EDZ02083.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204321053|gb|EDZ06254.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205271935|emb|CAR36779.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324550|gb|EDZ12389.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205334822|gb|EDZ21586.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339865|gb|EDZ26629.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343272|gb|EDZ30036.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347672|gb|EDZ34303.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708141|emb|CAR32434.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467282|gb|ACN45112.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261246160|emb|CBG23964.1| cold shock-like protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992672|gb|ACY87557.1| stress response protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157488|emb|CBW16978.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911933|dbj|BAJ35907.1| cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085180|emb|CBY94967.1| Cold shock-like protein cspD [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321223268|gb|EFX48337.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322616380|gb|EFY13289.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619630|gb|EFY16505.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622674|gb|EFY19519.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628587|gb|EFY25374.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631523|gb|EFY28279.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637050|gb|EFY33753.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641752|gb|EFY38388.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644456|gb|EFY40996.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649574|gb|EFY46005.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654124|gb|EFY50447.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658039|gb|EFY54306.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663513|gb|EFY59715.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670249|gb|EFY66389.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671485|gb|EFY67607.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676841|gb|EFY72908.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682766|gb|EFY78785.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686445|gb|EFY82427.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322713938|gb|EFZ05509.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323129210|gb|ADX16640.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|323196101|gb|EFZ81264.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196753|gb|EFZ81897.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202967|gb|EFZ88001.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323211913|gb|EFZ96741.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215155|gb|EFZ99900.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222358|gb|EGA06736.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226879|gb|EGA11062.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229833|gb|EGA13956.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233058|gb|EGA17154.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240793|gb|EGA24835.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243110|gb|EGA27130.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247431|gb|EGA31387.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251653|gb|EGA35520.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257359|gb|EGA41057.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261948|gb|EGA45514.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267963|gb|EGA51442.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271970|gb|EGA55385.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622624|gb|EGE28969.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|326627198|gb|EGE33541.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|332987837|gb|AEF06820.1| stress response protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353075348|gb|EHB41108.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353595039|gb|EHC52377.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353605915|gb|EHC60293.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|357206340|gb|AET54386.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|363550838|gb|EHL35164.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363550855|gb|EHL35180.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363556207|gb|EHL40422.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363564830|gb|EHL48871.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363568429|gb|EHL52409.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363573511|gb|EHL57390.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|363575066|gb|EHL58925.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|366060768|gb|EHN25028.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366063181|gb|EHN27401.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366069576|gb|EHN33699.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366070368|gb|EHN34481.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366076378|gb|EHN40416.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077843|gb|EHN41852.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366085243|gb|EHN49133.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366828360|gb|EHN55247.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205377|gb|EHP18892.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374354025|gb|AEZ45786.1| Cold shock-like protein cspD [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379051928|gb|EHY69819.1| cold shock domain protein CspD [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379982998|emb|CCF90715.1| stress response protein [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380462507|gb|AFD57910.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381290516|gb|EIC31781.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381294789|gb|EIC35918.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381301631|gb|EIC42687.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381309099|gb|EIC49941.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381313749|gb|EIC54528.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|383797855|gb|AFH44937.1| Cold shock protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392612713|gb|EIW95182.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392614754|gb|EIW97198.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392732986|gb|EIZ90192.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392739700|gb|EIZ96832.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392741007|gb|EIZ98120.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392752134|gb|EJA09076.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392753592|gb|EJA10521.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392753885|gb|EJA10806.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392757078|gb|EJA13969.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392765481|gb|EJA22267.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392771740|gb|EJA28454.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392772666|gb|EJA29366.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392776004|gb|EJA32694.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392776615|gb|EJA33302.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392791148|gb|EJA47638.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392793009|gb|EJA49454.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795904|gb|EJA52255.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392804074|gb|EJA60251.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392807496|gb|EJA63567.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392816261|gb|EJA72190.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392817245|gb|EJA73160.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392819244|gb|EJA75116.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392827233|gb|EJA82950.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392835330|gb|EJA90927.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392837067|gb|EJA92638.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392837680|gb|EJA93250.1| cold shock domain protein CspD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|395982923|gb|EJH92117.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395986060|gb|EJH95224.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989172|gb|EJH98307.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395997998|gb|EJI07036.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395998356|gb|EJI07388.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006828|gb|EJI15789.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396009730|gb|EJI18653.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396014804|gb|EJI23689.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396019361|gb|EJI28218.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396024774|gb|EJI33559.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029192|gb|EJI37931.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396029462|gb|EJI38199.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396036671|gb|EJI45330.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396040758|gb|EJI49381.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396046660|gb|EJI55243.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396050727|gb|EJI59249.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396057851|gb|EJI66321.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060256|gb|EJI68702.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062042|gb|EJI70455.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396065271|gb|EJI73648.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396072133|gb|EJI80448.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402523537|gb|EJW30853.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527480|gb|EJW34741.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402527779|gb|EJW35039.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402530809|gb|EJW38023.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414022393|gb|EKT05879.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414022456|gb|EKT05941.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414024019|gb|EKT07424.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036119|gb|EKT18962.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037547|gb|EKT20316.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414040706|gb|EKT23314.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414050735|gb|EKT32897.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414051969|gb|EKT34047.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056211|gb|EKT38049.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061160|gb|EKT42603.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414066616|gb|EKT47145.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434940946|gb|ELL47482.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434962312|gb|ELL55528.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434964305|gb|ELL57327.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434966109|gb|ELL59002.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434974162|gb|ELL66550.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434980502|gb|ELL72423.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986943|gb|ELL78594.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990555|gb|ELL82105.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434994837|gb|ELL86154.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996614|gb|ELL87930.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435007046|gb|ELL97903.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435013066|gb|ELM03726.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435015255|gb|ELM05812.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016588|gb|ELM07114.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435025616|gb|ELM15747.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435030550|gb|ELM20559.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032423|gb|ELM22367.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435042712|gb|ELM32429.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435044062|gb|ELM33760.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435048154|gb|ELM37719.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056636|gb|ELM46007.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435058640|gb|ELM47961.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062941|gb|ELM52113.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435070788|gb|ELM59770.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435071590|gb|ELM60530.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435076097|gb|ELM64893.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435080078|gb|ELM68771.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435085201|gb|ELM73755.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435095143|gb|ELM83480.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435095302|gb|ELM83620.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098634|gb|ELM86865.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103045|gb|ELM91148.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435103260|gb|ELM91355.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435116572|gb|ELN04307.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435116851|gb|ELN04565.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435119734|gb|ELN07336.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435120466|gb|ELN08044.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435133847|gb|ELN21003.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134062|gb|ELN21206.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435136903|gb|ELN23975.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435143123|gb|ELN29992.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435144640|gb|ELN31472.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435155272|gb|ELN41830.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435159505|gb|ELN45826.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163357|gb|ELN49493.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435167700|gb|ELN53595.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435173837|gb|ELN59306.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435176272|gb|ELN61662.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178703|gb|ELN63900.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435183965|gb|ELN68911.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435193002|gb|ELN77505.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197513|gb|ELN81796.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201311|gb|ELN85223.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435208863|gb|ELN92251.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435209093|gb|ELN92471.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435215358|gb|ELN98045.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435221596|gb|ELO03869.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435230463|gb|ELO11769.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435231597|gb|ELO12826.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435239862|gb|ELO20295.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241607|gb|ELO21949.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245434|gb|ELO25521.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435254201|gb|ELO33604.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435255106|gb|ELO34481.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435256253|gb|ELO35598.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435270116|gb|ELO48620.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435273306|gb|ELO51648.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435282400|gb|ELO60018.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435290272|gb|ELO67208.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435293084|gb|ELO69813.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435293146|gb|ELO69863.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435296476|gb|ELO72855.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435303115|gb|ELO79033.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435309040|gb|ELO83846.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435319698|gb|ELO92500.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321968|gb|ELO94309.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329183|gb|ELP00636.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435336843|gb|ELP06611.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|436414525|gb|ELP12453.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436416565|gb|ELP14470.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436423484|gb|ELP21295.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|444851487|gb|ELX76576.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444853045|gb|ELX78117.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854247|gb|ELX79312.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444857729|gb|ELX82728.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444858568|gb|ELX83552.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444859112|gb|ELX84068.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444878074|gb|ELY02202.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444880517|gb|ELY04591.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444882339|gb|ELY06305.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444888269|gb|ELY11867.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|451909892|gb|AGF81698.1| cold shock-like protein CspD [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 73
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV FDV G +
Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNH 60
Query: 66 QALDVTAPGGA 76
++ V A
Sbjct: 61 ASVIVPIEAEA 71
>gi|28275223|ref|NP_717259.2| cold shock protein Csp family [Shewanella oneidensis MR-1]
gi|410519687|gb|AAN54703.2| cold shock protein Csp family [Shewanella oneidensis MR-1]
Length = 69
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
++++TG V WF+ KG+GFI PD+GGAD FVH ++I SDG++TL E Q V ++V+ G
Sbjct: 1 MSKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSDGFKTLAEGQKVSYEVEQGQKG 60
Query: 64 KYQA 67
A
Sbjct: 61 PQAA 64
>gi|194293032|ref|YP_002008939.1| cold shock-like protein [Cupriavidus taiwanensis LMG 19424]
gi|193226936|emb|CAQ72887.1| Cold shock-like protein [Cupriavidus taiwanensis LMG 19424]
Length = 67
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI+PD GG DLF H I+++G+++L ENQ V+F+V+ G QA
Sbjct: 3 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRAEGFKSLQENQRVQFEVKNGPKG-LQA 61
Query: 68 LDVT 71
++T
Sbjct: 62 ANIT 65
>gi|425191813|ref|ZP_18588873.1| putative cold-shock protein [Escherichia coli NE1487]
gi|408118739|gb|EKH49855.1| putative cold-shock protein [Escherichia coli NE1487]
Length = 66
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G A
Sbjct: 2 TGLVKWFNADKGFGFITPDDGCKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 61
Query: 68 LDVT 71
VT
Sbjct: 62 NVVT 65
>gi|261339213|ref|ZP_05967071.1| hypothetical protein ENTCAN_05441 [Enterobacter cancerogenus ATCC
35316]
gi|288319062|gb|EFC58000.1| cold shock domain protein CspD [Enterobacter cancerogenus ATCC
35316]
Length = 73
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
G V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL QSV FDV G +
Sbjct: 1 MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNH 60
Query: 66 QALDVTAPGGA 76
+L V A
Sbjct: 61 ASLIVPVEAEA 71
>gi|432774175|ref|ZP_20008459.1| cold shock-like protein CspG [Escherichia coli KTE54]
gi|431319520|gb|ELG07190.1| cold shock-like protein CspG [Escherichia coli KTE54]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI PDDG D+FVH +I+S+ +RTL ENQ VEF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFITPDDGCKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|58004795|gb|AAW62458.1| cellular nucleic acid binding protein mutant 1-4 [synthetic
construct]
Length = 126
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 156 NSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------------------CFKCGGY 196
+S C+ CG H+AR+CP G G C++CG
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 197 GHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GHLA+DC + CYNCG+ GH+A+DC C+NCGKPGH AR+C
Sbjct: 62 GHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 112
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 130 VCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC 173
CYNC GH+A++C R+ CYNCG P H ARDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKE-----REQCCYNCGKPGHLARDC 112
>gi|262273606|ref|ZP_06051420.1| cold shock protein CspA [Grimontia hollisae CIP 101886]
gi|262273607|ref|ZP_06051421.1| cold shock protein CspD [Grimontia hollisae CIP 101886]
gi|262222584|gb|EEY73895.1| cold shock protein CspA [Grimontia hollisae CIP 101886]
gi|262222585|gb|EEY73896.1| cold shock protein CspD [Grimontia hollisae CIP 101886]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI D+GGAD+FVH ++I SDG++TL E Q V FDV+ G
Sbjct: 4 KTTGLVKWFNEEKGFGFITQDNGGADVFVHFRAIASDGFKTLAEGQKVSFDVEQGQKGP- 62
Query: 66 QALDVTA 72
QA +V A
Sbjct: 63 QAANVVA 69
>gi|437999946|ref|YP_007183679.1| cold shock protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812873|ref|YP_007449326.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339180|gb|AFZ83602.1| cold shock protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778842|gb|AGF49722.1| CspA family beta-ribbon cold shock protein [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 82
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGK 64
T+STG V WF+ AKG+GFI PD+GG ++F H SI+ DG++TL E Q V ++ GK
Sbjct: 15 TKSTGTVKWFNDAKGFGFITPDNGGEEIFAHFSSIQMDGFKTLKEGQKVSYETVQGPKGK 74
Query: 65 YQALDVTA 72
QAL++T+
Sbjct: 75 -QALNITS 81
>gi|218767948|ref|YP_002342460.1| transcriptional regulator [Neisseria meningitidis Z2491]
gi|241758498|ref|ZP_04756617.1| cold-shock DNA-binding domain protein [Neisseria flavescens
SK114]
gi|121051956|emb|CAM08264.1| putative transcriptional regulator [Neisseria meningitidis Z2491]
gi|241321333|gb|EER57481.1| cold-shock DNA-binding domain protein [Neisseria flavescens
SK114]
Length = 67
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQ 66
+TG V WF+ AKG+GFI PD+GG DLF H +I DG++TL E Q V FDV GK Q
Sbjct: 2 ATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMDGFKTLKEGQRVSFDVTTGPKGK-Q 60
Query: 67 ALDVTA 72
A ++ A
Sbjct: 61 AANIQA 66
>gi|261251826|ref|ZP_05944400.1| cold shock protein CspA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417953843|ref|ZP_12596885.1| cold-shock DNA-binding domain-containing protein [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260938699|gb|EEX94687.1| cold shock protein CspA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816488|gb|EGU51385.1| cold-shock DNA-binding domain-containing protein [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
++TG V WF+ KG+GFI P++GGAD+FVH ++I SDG++TL E Q V F+V+ G
Sbjct: 4 KTTGIVKWFNEEKGFGFITPENGGADVFVHFRAITSDGFKTLKEGQQVSFEVEQGQKGPQ 63
Query: 66 QALDVTA 72
A V A
Sbjct: 64 AANVVPA 70
>gi|209519137|ref|ZP_03267942.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
gi|209500437|gb|EEA00488.1| cold-shock DNA-binding domain protein [Burkholderia sp. H160]
Length = 67
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI D GG DLF H I+S+G+++L ENQ V F+++ GK A
Sbjct: 3 TGVVKWFNDAKGFGFITSDAGGEDLFAHFSEIRSEGFKSLKENQRVSFEIKTSPKGKQAA 62
>gi|34498661|ref|NP_902876.1| cold shock transcription regulator protein [Chromobacterium
violaceum ATCC 12472]
gi|34104514|gb|AAQ60872.1| cold shock transcription regulator protein [Chromobacterium
violaceum ATCC 12472]
Length = 110
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDV 57
+TG V WF+ +KG+GFI PD+GG D+F H I + G+R+L ENQ V FD+
Sbjct: 45 ATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDI 95
>gi|296084007|emb|CBI24395.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C+ C GH A++C R+ + NS C CGD H C + + + C
Sbjct: 167 CFICKKGGHRAKDCPEKHRSGS--QNSKICLKCGDSRHDMFSC---RNDYSPEDLKEIQC 221
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGG-----GSCFNCGK 245
+ C +GHL CI G CY CG+ GH C A SC+ CG+
Sbjct: 222 YICKSFGHLC--CINYVDTGPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRCGE 279
Query: 246 PGHFAREC---TKVAN 258
GHFAREC TKV+
Sbjct: 280 QGHFARECKSSTKVSK 295
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 158 GGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCY 217
G CYNCG+ H A +C + CF CG H A+ C+ G C+
Sbjct: 124 GACYNCGEEGHNAVNC--------ASVKRKKPCFVCGSLEHNAKQCM-------KGQDCF 168
Query: 218 NCGKSGHLARDCGA---GGAGGGGSCFNCGKPGHFAREC 253
C K GH A+DC G+ C CG H C
Sbjct: 169 ICKKGGHRAKDCPEKHRSGSQNSKICLKCGDSRHDMFSC 207
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 25/63 (39%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYN 184
GP CY C +GH C + CY CG+ HFAR+C S Y+
Sbjct: 239 GPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRCGEQGHFARECKSSTKVSKRYS 298
Query: 185 NNS 187
S
Sbjct: 299 EVS 301
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 211 GGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G G CYNCG+ GH A +C + CF CG H A++C K
Sbjct: 121 SGWGACYNCGEEGHNAVNCAS--VKRKKPCFVCGSLEHNAKQCMK 163
>gi|427783995|gb|JAA57449.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 178
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 59/151 (39%), Gaps = 44/151 (29%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSG--------------------------GCYNCG 164
CY C +GH AREC + + CY C
Sbjct: 7 CYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREKCYKCN 66
Query: 165 DPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGH 224
HFARDC C++C G GH+++DC G CYNCGK GH
Sbjct: 67 RIGHFARDC----------KEAEDRCYRCNGTGHISKDC----QHGPDEMSCYNCGKMGH 112
Query: 225 LARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
+AR+C +C+ C K GH +R+C +
Sbjct: 113 IARECKE----QEKTCYICHKQGHISRDCEQ 139
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 126 PGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNN 185
P CY C+ +GH AR+C CY C H ++DC Q G
Sbjct: 57 PIREKCYKCNRIGHFARDC---------KEAEDRCYRCNGTGHISKDC--QHGP------ 99
Query: 186 NSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
+ C+ CG GH+AR+C + CY C K GH++RDC
Sbjct: 100 DEMSCYNCGKMGHIARECKEQEKT------CYICHKQGHISRDC 137
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 124 YGPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQ 177
+GP + CYNC +GH+AREC + CY C H +RDC + +
Sbjct: 97 HGPDEMSCYNCGKMGHIARECKEQEKT---------CYICHKQGHISRDCEQDE 141
>gi|334333673|ref|XP_001376438.2| PREDICTED: nuclease-sensitive element-binding protein 1-like
[Monodelphis domestica]
Length = 322
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYEN----QSVEFDVQLE 60
T+ G V WF+ GYGFI DD D+FVHQ +IK + R + + VEFDV +E
Sbjct: 47 TKVWGTVKWFNVRNGYGFINRDDTKEDVFVHQTAIKKNNPRKYLRSVGDGEPVEFDV-VE 105
Query: 61 ADGKYQALDVTAPGGAPVHSSK 82
+ +A +VT PGGAPV SK
Sbjct: 106 GEKGVEAANVTGPGGAPVQGSK 127
>gi|170769983|ref|ZP_02904436.1| cold shock DNA-binding protein [Escherichia albertii TW07627]
gi|170121167|gb|EDS90098.1| cold shock DNA-binding protein [Escherichia albertii TW07627]
Length = 70
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
+ TG V WF+ KG+GFI P DGG D+FVH +I+S+ +RTL ENQ VEF ++ G
Sbjct: 4 KMTGLVKWFNADKGFGFISPSDGGKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGPRGPA 63
Query: 66 QALDVT 71
A VT
Sbjct: 64 AANVVT 69
>gi|161526063|ref|YP_001581075.1| cold-shock DNA-binding domain-containing protein [Burkholderia
multivorans ATCC 17616]
gi|167587642|ref|ZP_02380030.1| cold-shock DNA-binding domain protein [Burkholderia ubonensis Bu]
gi|189349222|ref|YP_001944850.1| CspA family cold shock protein [Burkholderia multivorans ATCC
17616]
gi|221201715|ref|ZP_03574753.1| cold-shock domain family protein [Burkholderia multivorans CGD2M]
gi|221207210|ref|ZP_03580220.1| cold-shock domain family protein [Burkholderia multivorans CGD2]
gi|221213338|ref|ZP_03586313.1| cold-shock domain family protein [Burkholderia multivorans CGD1]
gi|416988647|ref|ZP_11938626.1| CspA family cold shock protein [Burkholderia sp. TJI49]
gi|421473413|ref|ZP_15921526.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
ATCC BAA-247]
gi|421476363|ref|ZP_15924251.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
CF2]
gi|160343492|gb|ABX16578.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
ATCC 17616]
gi|189333244|dbj|BAG42314.1| CspA family cold shock protein [Burkholderia multivorans ATCC
17616]
gi|221166790|gb|EED99261.1| cold-shock domain family protein [Burkholderia multivorans CGD1]
gi|221172798|gb|EEE05235.1| cold-shock domain family protein [Burkholderia multivorans CGD2]
gi|221178531|gb|EEE10940.1| cold-shock domain family protein [Burkholderia multivorans CGD2M]
gi|325518815|gb|EGC98394.1| CspA family cold shock protein [Burkholderia sp. TJI49]
gi|400220984|gb|EJO51475.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
ATCC BAA-247]
gi|400228439|gb|EJO58373.1| cold-shock DNA-binding domain protein [Burkholderia multivorans
CF2]
Length = 67
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 7 STGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+TG V WF+ AKG+GFI P+ GG DLF H I+ +G++TL ENQ VEF+V+ G
Sbjct: 2 ATGTVKWFNDAKGFGFITPEGGGDDLFAHFSEIRVEGFKTLQENQKVEFEVKTGPKG 58
>gi|120599534|ref|YP_964108.1| cold-shock DNA-binding domain-containing protein [Shewanella sp.
W3-18-1]
gi|146292469|ref|YP_001182893.1| cold-shock DNA-binding domain-containing protein [Shewanella
putrefaciens CN-32]
gi|386313146|ref|YP_006009311.1| cold-shock protein [Shewanella putrefaciens 200]
gi|120559627|gb|ABM25554.1| cold-shock DNA-binding protein family [Shewanella sp. W3-18-1]
gi|145564159|gb|ABP75094.1| cold-shock DNA-binding protein family [Shewanella putrefaciens
CN-32]
gi|319425771|gb|ADV53845.1| cold-shock DNA-binding domain protein [Shewanella putrefaciens
200]
Length = 69
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
++++TG V WF+ KG+GFI PD+GGAD FVH ++I S+G++TL E Q V FD++ G
Sbjct: 1 MSKTTGVVKWFNEEKGFGFISPDNGGADAFVHFRAIVSEGFKTLGEGQKVSFDIEQGQKG 60
Query: 64 KYQA 67
A
Sbjct: 61 PQAA 64
>gi|440635159|gb|ELR05078.1| hypothetical protein GMDG_07120 [Geomyces destructans 20631-21]
Length = 212
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 52/167 (31%)
Query: 127 GGVVCYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDC--PRQQ--GGSNS 182
G CYNC G GH++REC ++ CY CG P H +RDC P + G S
Sbjct: 30 GPAKCYNCGGEGHMSRECPEGPKDKT-------CYKCGQPGHISRDCANPAAEGMGAGRS 82
Query: 183 YNNNSGG-CFKCGGYGHLARDCITRGSGGGGGG--------------------------- 214
+ +G C+KC GH+AR+C G+GG
Sbjct: 83 FGGGAGQECYKCSKVGHIARNCPEAGAGGYQNAGYGGGGGGYGGGGAGYGGGGAGYGGGA 142
Query: 215 --------RCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
CY+CG GH++RDC G C+NCG+ GH +R+C
Sbjct: 143 GGYGGRQQTCYSCGGVGHMSRDCTQ-----GQKCYNCGQTGHLSRDC 184
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 45/171 (26%)
Query: 125 GPGGVVCYNCDGVGHVARECTSNRRNSNYNNNSGG------CYNCGDPEHFARDCPR--- 175
GP CY C GH++R+C + S G CY C H AR+CP
Sbjct: 50 GPKDKTCYKCGQPGHISRDCANPAAEGMGAGRSFGGGAGQECYKCSKVGHIARNCPEAGA 109
Query: 176 ----------------------------QQGGSNSYNNNSGGCFKCGGYGHLARDCITRG 207
GG+ Y C+ CGG GH++RDC
Sbjct: 110 GGYQNAGYGGGGGGYGGGGAGYGGGGAGYGGGAGGYGGRQQTCYSCGGVGHMSRDCTQ-- 167
Query: 208 SGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTKVAN 258
G +CYNCG++GHL+RDC + +C+ C +PGH +C + N
Sbjct: 168 -----GQKCYNCGQTGHLSRDCPS-ETSAERTCYKCRQPGHVQAQCPENQN 212
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 189 GCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGH 248
GC+ CG H ARDC TRG +CYNCG GH++R+C G +C+ CG+PGH
Sbjct: 12 GCYNCGDQSHQARDCPTRGPA-----KCYNCGGEGHMSRECPEGPKDK--TCYKCGQPGH 64
Query: 249 FARECTKVA 257
+R+C A
Sbjct: 65 ISRDCANPA 73
>gi|448241439|ref|YP_007405492.1| putative cold shock protein [Serratia marcescens WW4]
gi|445211803|gb|AGE17473.1| putative cold shock protein [Serratia marcescens WW4]
gi|453066875|gb|EMF07799.1| cold-shock DNA-binding domain-containing protein [Serratia
marcescens VGH107]
Length = 73
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%)
Query: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKY 65
TG V WF+ AKG+GFI P GG D+F H +IK DGYRTL Q V FDV G +
Sbjct: 1 METGTVKWFNNAKGFGFICPAGGGEDIFAHYSTIKMDGYRTLKAGQQVSFDVHQGPKGNH 60
Query: 66 QALDVTAPGGA 76
+L V A
Sbjct: 61 ASLIVPVESEA 71
>gi|395516174|ref|XP_003762268.1| PREDICTED: uncharacterized protein LOC100914110 [Sarcophilus
harrisii]
Length = 255
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 5 TRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYEN----QSVEFDVQLE 60
T+ G V WF+ GYGFI DD D+FVHQ +IK + R + + VEFDV +E
Sbjct: 47 TKVWGTVKWFNVRNGYGFINRDDTKEDVFVHQTAIKKNNPRKYLRSVGDGEPVEFDV-VE 105
Query: 61 ADGKYQALDVTAPGGAPVHSSK 82
+ +A +VT PGGAPV SK
Sbjct: 106 GEKGVEAANVTGPGGAPVQGSK 127
>gi|256090144|ref|XP_002581073.1| cellular nucleic acid binding protein [Schistosoma mansoni]
Length = 190
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGG-------CFKCGGYGHLARDCITRGSGGGG 212
C+NCG +H+ARDC +G G CF CGG GH ARDC G G
Sbjct: 55 CFNCGGLDHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGDS 114
Query: 213 G----------GRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHFARECTK 255
G GRCY+CG+SGH+ R+C + C+ C K GHFAR+CT+
Sbjct: 115 GYNGGGGGGGGGRCYSCGESGHIVRNCPNNNS--DTLCYRCNKYGHFARDCTE 165
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
Query: 131 CYNCDGVGHVARECTSN--RRNSNYNNNSGG-----CYNCGDPEHFARDCPRQQGGSNSY 183
C+NC G GH AR+CT++ R +S YN GG CY+CG+ H R+CP
Sbjct: 92 CFNCGGTGHFARDCTNDGQRGDSGYNGGGGGGGGGRCYSCGESGHIVRNCPN-------- 143
Query: 184 NNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
NN+ C++C YGH ARDC GG G +CY C GH+A C
Sbjct: 144 NNSDTLCYRCNKYGHFARDCT---ESGGSGPQCYKCHGYGHIASRC 186
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 56/140 (40%), Gaps = 43/140 (30%)
Query: 157 SGGCYNCGDPEHFARDCP--------------------RQQGGSNSYNNNSGGCFKCGGY 196
S C+ CG P H+ARDC ++ + GCF CGG
Sbjct: 2 SDDCFKCGRPGHYARDCQAAPRGGGRGGGGGYRGGRGGGGGRDRDNNDGRRDGCFNCGGL 61
Query: 197 GHLARDCITRGSGGGGGG-----------RCYNCGKSGHLARDCGAGGAGGGG------- 238
H ARDC + GGGG +C+NCG +GH ARDC G G
Sbjct: 62 DHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGDSGYNGGGG 121
Query: 239 -----SCFNCGKPGHFAREC 253
C++CG+ GH R C
Sbjct: 122 GGGGGRCYSCGESGHIVRNC 141
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 42/105 (40%), Gaps = 37/105 (35%)
Query: 187 SGGCFKCGGYGHLARDCIT------------------------RGSGGGGGGRCYNCGKS 222
S CFKCG GH ARDC R + G C+NCG
Sbjct: 2 SDDCFKCGRPGHYARDCQAAPRGGGRGGGGGYRGGRGGGGGRDRDNNDGRRDGCFNCGGL 61
Query: 223 GHLARDCGAGGAGGGG-------------SCFNCGKPGHFARECT 254
H ARDC +G GG CFNCG GHFAR+CT
Sbjct: 62 DHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCT 106
>gi|238749763|ref|ZP_04611268.1| Cold shock-like protein cspE [Yersinia rohdei ATCC 43380]
gi|238712418|gb|EEQ04631.1| Cold shock-like protein cspE [Yersinia rohdei ATCC 43380]
Length = 69
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQ 58
+++ TG+V WF+ AKG+GFI DGG D+FVH +I +DG++TL E Q VE+ +Q
Sbjct: 1 MSKKTGQVKWFNEAKGFGFIEQHDGGKDVFVHFSAIATDGFKTLAEGQRVEYTIQ 55
>gi|123441828|ref|YP_001005812.1| cold shock-like protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420259038|ref|ZP_14761757.1| cold shock-like protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088789|emb|CAL11595.1| cold shock-like protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404513522|gb|EKA27338.1| cold shock-like protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 85
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADGKYQA 67
TG V WF+ AKG+GFI P+ GG D+F H +I+ DGYRTL Q V FDV G + +
Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62
Query: 68 LDV 70
L V
Sbjct: 63 LIV 65
>gi|386829540|ref|ZP_10116647.1| cold shock protein [Beggiatoa alba B18LD]
gi|386430424|gb|EIJ44252.1| cold shock protein [Beggiatoa alba B18LD]
Length = 67
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 41/56 (73%)
Query: 8 TGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
TG V WF+ +KG+GF+ PDDG D+FVH +I+S G++TL E Q+V+F+ ++ G
Sbjct: 3 TGTVKWFNESKGFGFLAPDDGSKDVFVHFSTIQSSGFKTLKEGQAVQFEAKMGPKG 58
>gi|67467476|ref|XP_649839.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56466350|gb|EAL44453.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449701896|gb|EMD42631.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 389
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 160 CYNCGDPEHFARDCPRQQGGSNSYNNNSGGCFKCGGYGHLARDCITRGSGGGGGGRCYNC 219
C CG H ++DCP+ + N S CF CG GH+++DC +C+ C
Sbjct: 269 CIICGKIGHTSKDCPQNE------NKGSDCCFICGETGHISKDC------PNAERKCFVC 316
Query: 220 GKSGHLARDCGAGGAGGGGSCFNCGKPGHFAREC 253
GK+GH +RDC G CF CG+ GH R+C
Sbjct: 317 GKTGHKSRDC-PKAKGNNRPCFICGEIGHLDRDC 349
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 131 CYNCDGVGHVARECTSNRRNSNYNNNSGGCYNCGDPEHFARDCPRQQGGSNSYNNNSGGC 190
C C +GH +++C N N S C+ CG+ H ++DCP N C
Sbjct: 269 CIICGKIGHTSKDCPQNE-----NKGSDCCFICGETGHISKDCP----------NAERKC 313
Query: 191 FKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDC 229
F CG GH +RDC G C+ CG+ GHL RDC
Sbjct: 314 FVCGKTGHKSRDC---PKAKGNNRPCFICGEIGHLDRDC 349
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 190 CFKCGGYGHLARDCITRGSGGGGGGRCYNCGKSGHLARDCGAGGAGGGGSCFNCGKPGHF 249
C CG GH ++DC + G C+ CG++GH+++DC CF CGK GH
Sbjct: 269 CIICGKIGHTSKDCPQNENKGSDC--CFICGETGHISKDC----PNAERKCFVCGKTGHK 322
Query: 250 ARECTK 255
+R+C K
Sbjct: 323 SRDCPK 328
>gi|15617086|ref|NP_240299.1| cold shock protein CspE [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|21672738|ref|NP_660805.1| cold shock protein CspE [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|219681838|ref|YP_002468224.1| cold shock protein CspE [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682393|ref|YP_002468777.1| cold shock protein CspE [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471542|ref|ZP_05635541.1| cold shock protein CspE [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384226284|ref|YP_005617447.1| cold shock protein CspE [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226777|ref|YP_005618528.1| cold shock protein CspE [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384227337|ref|YP_005619087.1| cold shock protein CspE [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|384227907|ref|YP_005619652.1| cold shock protein CspE [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|414562842|ref|YP_005618033.1| cold shock protein CspE [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|54036912|sp|P63237.2|CSPE_BUCAI RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|54036913|sp|P63238.2|CSPE_BUCAP RecName: Full=Cold shock-like protein CspE; Short=CSP-E
gi|25296105|pir||A84987 cold shock-like protein cspE [imported] - Buchnera sp. (strain
APS)
gi|10039151|dbj|BAB13185.1| cold shock-like protein cspE [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|21623383|gb|AAM68016.1| cold shock like protein CspE [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|219622126|gb|ACL30282.1| cold shock protein E [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624681|gb|ACL30836.1| cold shock protein E [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|311086213|gb|ADP66295.1| cold shock protein CspE [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086791|gb|ADP66872.1| cold shock protein CspE [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087378|gb|ADP67458.1| cold shock protein CspE [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087874|gb|ADP67953.1| cold shock protein CspE [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|345538847|gb|AEO08824.1| cold shock protein CspE [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 69
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 4 LTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEADG 63
+++ G V WF+ +KG+GFI P+DG D+FVH +I+S+G++TL E QSVEF++ A G
Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVEFEITEGAKG 60
Query: 64 KYQA 67
A
Sbjct: 61 PSAA 64
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.139 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,627,032,315
Number of Sequences: 23463169
Number of extensions: 321129563
Number of successful extensions: 3131514
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10827
Number of HSP's successfully gapped in prelim test: 35864
Number of HSP's that attempted gapping in prelim test: 1993350
Number of HSP's gapped (non-prelim): 442433
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)