BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047170
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24473|IF2B_WHEAT Eukaryotic translation initiation factor 2 subunit beta OS=Triticum
aestivum PE=1 SV=1
Length = 270
Score = 115 bits (288), Expect = 7e-26, Method: Composition-based stats.
Identities = 61/102 (59%), Positives = 70/102 (68%), Gaps = 16/102 (15%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
MHRQPE+V + FLL+EMGTSGSLDGQQ LV+KGRFA K E IL + +VIC CKS
Sbjct: 170 MHRQPEHV--MMFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEAILRRYINEYVICHGCKS 227
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRRNTG 88
PDTIL+ N LFFL + PIKAGFVA+ GRR G
Sbjct: 228 PDTILSKENRLFFLRCEQCGSSRSVAPIKAGFVAQVGRRKAG 269
>sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2 subunit beta OS=Malus
domestica PE=2 SV=2
Length = 271
Score = 114 bits (284), Expect = 3e-25, Method: Composition-based stats.
Identities = 60/102 (58%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
MHRQP++V + FLL+E+GTSGSLDGQQ LVVKGRFA K EGIL + +VIC C+S
Sbjct: 171 MHRQPDHV--MAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQS 228
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRRNTG 88
PDTIL+ N LFFL + P KAGF+AR GRRN G
Sbjct: 229 PDTILSKENRLFFLRCEKCGSGRSVAPNKAGFMARVGRRNAG 270
>sp|Q41969|IF2B_ARATH Eukaryotic translation initiation factor 2 subunit beta
OS=Arabidopsis thaliana GN=EMB1401 PE=2 SV=3
Length = 268
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 69/101 (68%), Gaps = 16/101 (15%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
MHRQP++V + +LL+E+GTSGSLDGQQ LVVKGRFA K EGIL + +VIC CKS
Sbjct: 170 MHRQPDHV--MQYLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYITDYVICLGCKS 227
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRRNT 87
PDTIL+ N LFFL + PIK GFVAR RR T
Sbjct: 228 PDTILSKENRLFFLRCEKCGSQRSVAPIKTGFVARVSRRKT 268
>sp|Q5E9D0|IF2B_BOVIN Eukaryotic translation initiation factor 2 subunit 2 OS=Bos taurus
GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
+HRQP+++ + FLL+E+GTSGS+DG LV+KGRF K IE +L + +V C C+S
Sbjct: 229 LHRQPKHL--LAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRS 286
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
PDTIL L+FL + IK GF A GRR
Sbjct: 287 PDTILQKDTRLYFLQCETCHSRCSVASIKTGFQAVTGRR 325
>sp|P56329|IF2B_SCHPO Probable eukaryotic translation initiation factor 2 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif212 PE=1 SV=2
Length = 321
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKFVI----CGCCKS 56
MHR ++V + FL +E+GTSGS+DG L++KGRF K IE +L ++++ C CKS
Sbjct: 221 MHRSLDHV--IQFLFAELGTSGSVDGSSRLIIKGRFQQKQIENVLRRYIVEYVTCKTCKS 278
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
PDTILT N +FF+ + IK G+ A+ G+R
Sbjct: 279 PDTILTKENRIFFMTCEACGSVRSVQAIKTGYQAQIGKR 317
>sp|P41035|IF2B_RABIT Eukaryotic translation initiation factor 2 subunit 2 OS=Oryctolagus
cuniculus GN=EIF2S2 PE=1 SV=1
Length = 333
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
+HRQP+++ + FLL+E+GTSGS+DG LV+KGRF K IE +L + +V C C+S
Sbjct: 229 LHRQPKHL--LAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRS 286
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
PDTIL L+FL + IK GF A G+R
Sbjct: 287 PDTILQKDTRLYFLQCETCHSRCSVASIKTGFQAVTGKR 325
>sp|Q99L45|IF2B_MOUSE Eukaryotic translation initiation factor 2 subunit 2 OS=Mus
musculus GN=Eif2s2 PE=1 SV=1
Length = 331
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
+HRQP+++ + FLL+E+GTSGS+DG LV+KGRF K IE +L + +V C C+S
Sbjct: 227 LHRQPKHL--LAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRS 284
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
PDTIL L+FL + IK GF A G+R
Sbjct: 285 PDTILQKDTRLYFLQCETCHSRCSVASIKTGFQAVTGKR 323
>sp|P20042|IF2B_HUMAN Eukaryotic translation initiation factor 2 subunit 2 OS=Homo
sapiens GN=EIF2S2 PE=1 SV=2
Length = 333
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
+HRQP+++ + FLL+E+GTSGS+DG LV+KGRF K IE +L + +V C C+S
Sbjct: 229 LHRQPKHL--LAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRS 286
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
PDTIL L+FL + IK GF A G+R
Sbjct: 287 PDTILQKDTRLYFLQCETCHSRCSVASIKTGFQAVTGKR 325
>sp|Q5R4T9|IF2B_PONAB Eukaryotic translation initiation factor 2 subunit 2 OS=Pongo
abelii GN=EIF2S2 PE=2 SV=1
Length = 333
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
+HRQP+++ + FLL+E+GTSGS+DG LV+KGRF K IE +L + +V C C+S
Sbjct: 229 LHRQPKHL--LAFLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRS 286
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
PDTIL L+FL IK GF A G+R
Sbjct: 287 PDTILQKDTRLYFLQCETCHSRCSAASIKTGFQAVTGKR 325
>sp|P41375|IF2B_DROME Eukaryotic translation initiation factor 2 subunit 2 OS=Drosophila
melanogaster GN=eIF-2beta PE=1 SV=1
Length = 312
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
+HR P+++ + FLL+E+GTSGS+DG Q L++KGRF K IE +L + +V C C+S
Sbjct: 208 LHRLPKHL--LDFLLAELGTSGSMDGNQQLIIKGRFQPKQIENVLRRYIKEYVTCHTCRS 265
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
P+TIL LFFL + IK+GF A G+R
Sbjct: 266 PETILQKDTRLFFLQCESCGSRCSVASIKSGFQAVTGKR 304
>sp|Q21230|IF2B_CAEEL Eukaryotic translation initiation factor 2 subunit 2
OS=Caenorhabditis elegans GN=K04G2.1 PE=3 SV=4
Length = 250
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKS 56
M RQ ++V + FLL+E+GT+GS+DG L+VKGR+ K E +L K +V+C CKS
Sbjct: 141 MKRQDKHV--LQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKS 198
Query: 57 PDTILTNGNHLFFL----------IFPIKAGFVARFGRR 85
P+T LT LFFL + IK+GF A G+R
Sbjct: 199 PETQLTKDTRLFFLQCTNCGSRCSVTAIKSGFKAVVGKR 237
>sp|P09064|IF2B_YEAST Eukaryotic translation initiation factor 2 subunit beta
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SUI3 PE=1 SV=2
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 18/101 (17%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKFVI----CGCCKS 56
+HR PE++ + +L +E+GTSGS+DGQ+ LV+KG+F SK +E +L ++++ C CKS
Sbjct: 184 LHRSPEHL--IQYLFAELGTSGSVDGQKRLVIKGKFQSKQMENVLRRYILEYVTCKTCKS 241
Query: 57 PDTILT--NGNHLFFL----------IFPIKAGFVARFGRR 85
+T L N LFF+ + IK GF A G+R
Sbjct: 242 INTELKREQSNRLFFMVCKSCGSTRSVSSIKTGFQATVGKR 282
>sp|Q54T27|IF2B_DICDI Eukaryotic translation initiation factor 2 subunit 2
OS=Dictyostelium discoideum GN=eif2s2 PE=3 SV=1
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILH----KFVICGCCKS 56
++R+ E+V ++ +E+GT+GS+DG Q LV++GRF + IE ++ ++V C CKS
Sbjct: 216 LNRKVEHV--YNYVFAELGTNGSIDGNQRLVIRGRFKTSQIEIVIRHYISEYVACRNCKS 273
Query: 57 PDTILTNGNHLFFL 70
P+T+L N L+FL
Sbjct: 274 PNTVLERNNRLYFL 287
>sp|O58312|IF2B_PYRHO Translation initiation factor 2 subunit beta OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2b PE=3 SV=1
Length = 140
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKS 56
++R P+++ + FLL E+ T+G+L+G++ +V++GRF I L K+ VIC C S
Sbjct: 56 LNRDPQHL--LKFLLREIATAGTLEGKR-VVLQGRFTPYLIANKLKKYIKEYVICPVCGS 112
Query: 57 PDTILTNGNHLFFL 70
PDT + + +FL
Sbjct: 113 PDTKIIKRDRFYFL 126
>sp|A5UKI8|IF2B_METS3 Translation initiation factor 2 subunit beta OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=eif2b PE=3
SV=1
Length = 135
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKS 56
++R P++V + FLL E+GT+G+L+G + +++G+F ++ +E + K+VIC C
Sbjct: 51 LNRDPQHV--LKFLLRELGTAGNLEGSR-AILQGKFTHYLINERLEDYVEKYVICHECNR 107
Query: 57 PDTILTNGNHLFFL 70
PDT + + +F L
Sbjct: 108 PDTKIIREDRIFIL 121
>sp|Q9UYR6|IF2B_PYRAB Translation initiation factor 2 subunit beta OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2b PE=3 SV=1
Length = 140
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKS 56
++R P+++ + FLL E+ T+G+L+G++ +V++GRF + I+ + ++VIC C S
Sbjct: 56 LNRDPQHL--LKFLLREIATAGTLEGKR-VVLQGRFTPYLIANKIKKYIKEYVICPVCGS 112
Query: 57 PDTILTNGNHLFFL 70
PDT + + +FL
Sbjct: 113 PDTKIIKRDRFYFL 126
>sp|C5A2A8|IF2B_THEGJ Translation initiation factor 2 subunit beta OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=eif2b PE=3 SV=1
Length = 142
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKS 56
M+R P ++ + F+L E+ T+G+L+G++ ++++GRF I L K+ VIC C S
Sbjct: 58 MNRDPSHL--LKFILREVATAGTLEGRR-VILQGRFTPYLIANKLKKYLKEYVICPVCGS 114
Query: 57 PDTILTNGNHLFFL 70
PDT + + +FL
Sbjct: 115 PDTKIIKRDRFYFL 128
>sp|Q97W59|IF2B_SULSO Translation initiation factor 2 subunit beta OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=eif2b PE=1 SV=1
Length = 139
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + LV++G+F+S+ I ++ +F V C CKS DTIL
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELVIQGKFSSQVINTLMERFLKAYVECSTCKSLDTIL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|Q8U3I5|IF2B_PYRFU Translation initiation factor 2 subunit beta OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=eif2b
PE=1 SV=1
Length = 140
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKS 56
++R P+++ + FLL E+ T+G+L+G++ +V++GRF I L K+ VIC C S
Sbjct: 56 LNRDPQHL--LKFLLREIATAGTLEGRR-VVLQGRFTPYLIANKLKKYIKEYVICPVCGS 112
Query: 57 PDTILTNGNHLFFL 70
PDT + + FL
Sbjct: 113 PDTKIIKRDRFHFL 126
>sp|C3N8N2|IF2B_SULIY Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif2b
PE=3 SV=1
Length = 139
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + L+++G+F+S+ I ++ +F V C CKS DT+L
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|C3NMA3|IF2B_SULIN Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif2b
PE=3 SV=1
Length = 139
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + L+++G+F+S+ I ++ +F V C CKS DT+L
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|C3MU32|IF2B_SULIM Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=eif2b PE=3
SV=1
Length = 139
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + L+++G+F+S+ I ++ +F V C CKS DT+L
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|C3MK63|IF2B_SULIL Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=eif2b PE=3
SV=1
Length = 139
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + L+++G+F+S+ I ++ +F V C CKS DT+L
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|C4KK87|IF2B_SULIK Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=eif2b PE=3
SV=1
Length = 139
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + L+++G+F+S+ I ++ +F V C CKS DT+L
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|C3N120|IF2B_SULIA Translation initiation factor 2 subunit beta OS=Sulfolobus
islandicus (strain M.16.27) GN=eif2b PE=3 SV=1
Length = 139
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTIL 61
E+ + +LL E+ G++D + L+++G+F+S+ I ++ +F V C CKS DT+L
Sbjct: 57 EDKICMKYLLKELAAPGNVDDKGELIIQGKFSSQVINTLMERFLKAYVECSTCKSLDTVL 116
Query: 62 TNGNHLFFLI 71
++++
Sbjct: 117 KKEKKSWYIV 126
>sp|Q974Z6|IF2B_SULTO Translation initiation factor 2 subunit beta OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=eif2b PE=3 SV=2
Length = 139
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 13 FLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTILTNGNHLF 68
F+L E+ G++D LV++G+F+S I I+ +F V C CKS DT+L +
Sbjct: 64 FILKELAAPGNVDENGQLVIQGKFSSASINKIMERFIKTYVQCSTCKSLDTVLIKEKKAW 123
Query: 69 FL 70
++
Sbjct: 124 YI 125
>sp|A0B5K5|IF2B_METTP Translation initiation factor 2 subunit beta OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=eif2b PE=3 SV=1
Length = 208
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIE----GILHKFVICGCCKS 56
++R P+++ + FLL E+GT+G ++G + V +G+F + I+ + ++VIC CK
Sbjct: 51 LNRDPDHL--MKFLLQELGTAGKIEGHRG-VFQGKFTEQAIQNQIAAYVDEYVICSECKL 107
Query: 57 PDTILTNGNHLFFL 70
PDT L + + L
Sbjct: 108 PDTHLIKSDRVLML 121
>sp|O27797|IF2B_METTH Translation initiation factor 2 subunit beta OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eif2b PE=1 SV=1
Length = 135
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKS 56
++R P+++ + FLL E+GT+G+L+G + +++G+F ++ IE ++KFVIC C
Sbjct: 51 LNRDPQHL--LKFLLRELGTAGNLEGGR-AILQGKFTHFLINERIEDYVNKFVICHECNR 107
Query: 57 PDT 59
PDT
Sbjct: 108 PDT 110
>sp|Q5JIT0|IF2B_PYRKO Translation initiation factor 2 subunit beta OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2b PE=3 SV=1
Length = 142
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYI----EGILHKFVICGCCKS 56
M+R P ++ + F+L E+ T+G+L+G++ +++GRF I + L +FVIC C S
Sbjct: 58 MNRDPNHL--LKFILREVATAGTLEGRR-AILQGRFTPYLIANKMKKYLKEFVICPVCGS 114
Query: 57 PDTILTNGNHLFFL 70
PDT + FL
Sbjct: 115 PDTKIIKKGRFHFL 128
>sp|Q6L0E6|IF2B_PICTO Translation initiation factor 2 subunit beta OS=Picrophilus
torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 /
NBRC 100828) GN=eif2b PE=3 SV=1
Length = 205
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKS 56
M+R PE DV+ +L E G L GQ+ L++ + + I+ ++++ VIC CKS
Sbjct: 52 MNRDPE--DVIKYLTKEFGIGAVLSGQR-LIINRKVSEDEIQSKMNEYMATYVICYECKS 108
Query: 57 PDTILTNGNHLFFLI 71
PDT + + L+
Sbjct: 109 PDTEIQKIGRTYLLV 123
>sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit beta OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eif2b
PE=3 SV=1
Length = 204
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 11 VTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILH----KFVICGCCKSPDTILTNGNH 66
+ F+L E+GT+G +DG + V G+F + IL +VIC C PDT L +
Sbjct: 60 MKFILGELGTAGKIDGNRA-VFNGKFEQAQFDAILETYVGDYVICSECGRPDTKLVKDDR 118
Query: 67 LFFLI 71
+ L+
Sbjct: 119 VLMLL 123
>sp|Q4JA57|IF2B_SULAC Translation initiation factor 2 subunit beta OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=eif2b PE=3 SV=1
Length = 141
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 13 FLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKF----VICGCCKSPDTILTNGNHLF 68
+LL E+ GSL LV++G+F+S+ + ++ +F V C C+S DTIL ++
Sbjct: 66 YLLKELAAPGSLGENGQLVIQGKFSSQVVTMLMERFLKMYVQCSTCRSFDTILKRDKKVW 125
Query: 69 FL 70
+
Sbjct: 126 II 127
>sp|Q2NHD9|IF2B_METST Translation initiation factor 2 subunit beta OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=eif2b PE=3 SV=1
Length = 142
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKS 56
++R P++V + +LL E+GTSG+++G + +++G+F + ++ + FV+C C
Sbjct: 58 LNRDPQHV--LKYLLRELGTSGNVEGNR-AILQGKFTHYVINDRVKEYVDNFVMCHECNR 114
Query: 57 PDTILTNGNHLFFL 70
PDT++ + + L
Sbjct: 115 PDTVIIREDRIDML 128
>sp|A4YEI1|IF2B_METS5 Translation initiation factor 2 subunit beta OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=eif2b PE=3 SV=1
Length = 140
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASK----YIEGILHKFVICGCCKSPDTIL 61
E+ + +LL E+ +GS+ L+++G+F++ +++ L +V C CKS DT+L
Sbjct: 58 EDKICMRYLLKELAAAGSISENGQLMIQGKFSNAIVNTFMDRFLKTYVQCSTCKSLDTVL 117
Query: 62 TNGNHLFFL 70
++++
Sbjct: 118 VKDKKIWYI 126
>sp|A6VIT7|IF2B_METM7 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=eif2b PE=3
SV=1
Length = 138
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRF----ASKYIEGILHKFVICGCCKS 56
M R P+ + +++ E+GT+G ++G + L+++G+F ++ I+ ++++V+C C
Sbjct: 54 MERDPQ--EFAKYVMKELGTAGDMEGVR-LILQGKFGWRMVNEKIQNYVNEYVLCPECGK 110
Query: 57 PDTILTNGNHLFFL 70
PDT + + FL
Sbjct: 111 PDTKIVKEGRIHFL 124
>sp|A9A7T1|IF2B_METM6 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=eif2b PE=3
SV=1
Length = 138
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRF----ASKYIEGILHKFVICGCCKS 56
M R P+ + +++ E+GT+G ++G + L+++G+F ++ I+ ++++V+C C
Sbjct: 54 MERDPQ--EFAKYVMKELGTAGDMEGVR-LILQGKFGWRMVNEKIQNYVNEYVLCPECGK 110
Query: 57 PDTILTNGNHLFFL 70
PDT + + FL
Sbjct: 111 PDTKIVKEGRIHFL 124
>sp|Q6M0H3|IF2B_METMP Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain S2 / LL) GN=eif2b PE=3 SV=1
Length = 138
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRF----ASKYIEGILHKFVICGCCKS 56
M R P+ + +++ E+GT+G ++G + L+++G+F ++ I+ ++++V+C C
Sbjct: 54 MERDPQ--EFAKYVMKELGTAGDMEGVR-LILQGKFGWRMVNEKIQNYVNEYVLCPECGK 110
Query: 57 PDTILTNGNHLFFL 70
PDT + + FL
Sbjct: 111 PDTKIVKEGRIHFL 124
>sp|Q8TWR5|IF2B_METKA Translation initiation factor 2 subunit beta OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=eif2b PE=3 SV=1
Length = 138
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGIL----HKFVICGCCKS 56
+ R PE++ + L E+GT+G +DG + L++ G + K +E L +FV+C C
Sbjct: 53 LDRDPEHI--TKYFLKELGTAGHVDGGR-LILHGVYHPKLVEEELKNYVEEFVLCPECGK 109
Query: 57 PDTILTNGNHLFFL 70
PDT L + + L
Sbjct: 110 PDTKLVREDRQWIL 123
>sp|Q8TU91|IF2B_METAC Translation initiation factor 2 subunit beta OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=eif2b PE=3 SV=1
Length = 202
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKS 56
++R P+++ + +L E+GT+G ++G + V +GRF S I+ + ++V+C C
Sbjct: 51 LNRDPDHL--MKYLTRELGTAGKIEGTRA-VFQGRFTRAQISDNIQAYVDEYVMCSECGR 107
Query: 57 PDTILTNGNHLFFL 70
PDT L + + L
Sbjct: 108 PDTQLVRVDRVLVL 121
>sp|Q8PWV1|IF2B_METMA Translation initiation factor 2 subunit beta OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eif2b PE=3 SV=1
Length = 202
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKS 56
++R P+++ + +L E+GT+G ++G + V +GRF S I+ + ++V+C C
Sbjct: 51 LNRDPDHL--MKYLTRELGTAGKIEGTRA-VFQGRFTRAQLSDNIQAYVDEYVMCSECGR 107
Query: 57 PDTILTNGNHLFFL 70
PDT L + + L
Sbjct: 108 PDTQLVRVDRVLVL 121
>sp|A6URT3|IF2B_METVS Translation initiation factor 2 subunit beta OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=eif2b
PE=3 SV=1
Length = 138
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 9 DVVTFLLSEMGTSGSLDGQQHLVVKGRF----ASKYIEGILHKFVICGCCKSPDTILTNG 64
+ F++ E+GT+G ++G + L+++G+F ++ I+ ++++V+C C PDT +
Sbjct: 60 EFAKFVMKELGTAGDMEGNR-LILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIIKE 118
Query: 65 NHLFFL 70
+ FL
Sbjct: 119 GRIHFL 124
>sp|Q3INQ4|IF2B_NATPD Translation initiation factor 2 subunit beta OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=eif2b PE=3
SV=1
Length = 134
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHK----FVICGCCKSPDTIL 61
E V+ FL +E+GTS ++D + L + G F +E ++ +VIC C PDT L
Sbjct: 53 EESHVMKFLQNELGTSANIDERGRLRLTGEFRQARVEEAINDYVEGYVICPECGLPDTRL 112
Query: 62 TNGN 65
N
Sbjct: 113 EKEN 116
>sp|A6UX55|IF2B_META3 Translation initiation factor 2 subunit beta OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eif2b PE=3
SV=1
Length = 139
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKFV----ICGCCKS 56
+ R+P+ ++L E+GT+G ++G + L+++G+F + I + KFV +C C
Sbjct: 55 IRREPQFF--AKYVLKELGTAGDVEGPR-LILQGKFGNYIINSKIKKFVDEYVLCPECGK 111
Query: 57 PDTILTNGNHLFFL 70
PDT + + FL
Sbjct: 112 PDTKIIKEGRIHFL 125
>sp|A7I5J0|IF2B_METB6 Translation initiation factor 2 subunit beta OS=Methanoregula
boonei (strain 6A8) GN=eif2b PE=3 SV=1
Length = 204
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 10 VVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEGILHKFV----ICGCCKSPDTILTNGN 65
++ ++L E+GTSG ++G + + G+F I I+ +V IC C PDT L +
Sbjct: 59 LMKYMLGELGTSGKIEGNR-AIFNGKFEISQIRMIIKSYVDDYVICSECGKPDTRLVKDD 117
Query: 66 HLFFL 70
+ L
Sbjct: 118 RVLLL 122
>sp|A4FZP0|IF2B_METM5 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=eif2b PE=3
SV=1
Length = 138
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 13 FLLSEMGTSGSLDGQQHLVVKGRF----ASKYIEGILHKFVICGCCKSPDTILTNGNHLF 68
+++ E+GT+G ++G + L+++G+F ++ I+ ++++V+C C PDT + +
Sbjct: 64 YVMKELGTAGDIEGVR-LILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKEGRIH 122
Query: 69 FL 70
FL
Sbjct: 123 FL 124
>sp|Q5V323|IF2B_HALMA Translation initiation factor 2 subunit beta OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=eif2b PE=3 SV=1
Length = 134
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 ENVDVVTFLLSEMGTSGSLDGQQHLVVKGRFASKYIEG----ILHKFVICGCCKSPDTIL 61
E+ V+ FL +++GTSG +D + + G F + IE + +FV+C C PDT L
Sbjct: 53 EDDHVMKFLQNDLGTSGHIDESGRVRLTGEFDATRIEASIDEYVDEFVLCSECGLPDTQL 112
Query: 62 TNGNHLFFL 70
L
Sbjct: 113 EREQGALLL 121
>sp|A3CXJ3|IF2B_METMJ Translation initiation factor 2 subunit beta OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif2b
PE=3 SV=1
Length = 205
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 14 LLSEMGTSGSLDGQQHLVVKGRFASKYI----EGILHKFVICGCCKSPDTILTNGNHLFF 69
LL E+GT+G ++G + V G+F + I +G + +VIC C PDT L +
Sbjct: 63 LLGELGTAGKVEGTR-AVFSGKFEQEQINTIIKGYVDDYVICSECGKPDTRLVKTERVLT 121
Query: 70 L 70
L
Sbjct: 122 L 122
>sp|P38431|IF5_YEAST Eukaryotic translation initiation factor 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF5 PE=1
SV=1
Length = 405
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 10 VVTFLLSEMG--TSGSLDGQQHLVVKGRFASKY---IEGILHKFVICGCCKSPDT--ILT 62
+V + E+G TS S+D ++LV +K ++G ++KFV+CG CK+P+T I+T
Sbjct: 53 IVKYFGFELGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIIT 112
Query: 63 NGNHL 67
N L
Sbjct: 113 KDNDL 117
>sp|A1RX59|IF2B_THEPD Translation initiation factor 2 subunit beta OS=Thermofilum pendens
(strain Hrk 5) GN=eif2b PE=3 SV=1
Length = 141
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 1 MHRQPENVDVVTFLLSEMGTSGSLDGQQHLV---VKGRFASKYIEGILHKFVICGCCKSP 57
++R+P + + F+L E+ G + ++ V + +K +E +++V C C++P
Sbjct: 57 LNREPPVL--LRFILKEIALPGVYENGTAVIHGEVSAQTLNKLLERFYNEYVKCPVCEAP 114
Query: 58 DTILTNGNHLFFL 70
DTIL L ++
Sbjct: 115 DTILVKEKKLMYI 127
>sp|Q9HQ97|IF2B_HALSA Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=eif2b PE=3 SV=1
Length = 132
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 10 VVTFLLSEMGTSGSLDGQQHLVVKGRFA----SKYIEGILHKFVICGCCKSPDTIL-TNG 64
V+ FL +E+GTS S+D + G F S ++ + +V C C PDT L T+G
Sbjct: 57 VLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDG 116
Query: 65 NHL 67
+ +
Sbjct: 117 DTI 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.144 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,576,776
Number of Sequences: 539616
Number of extensions: 1156661
Number of successful extensions: 2455
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2377
Number of HSP's gapped (non-prelim): 60
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)